Citrus Sinensis ID: 011349
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 488 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.987 | 0.989 | 0.703 | 0.0 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.926 | 0.882 | 0.669 | 0.0 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.909 | 0.954 | 0.471 | 1e-121 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.559 | 0.665 | 0.358 | 9e-40 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.559 | 0.662 | 0.355 | 3e-39 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.567 | 0.712 | 0.330 | 8e-38 | |
| O48814 | 395 | Serine/threonine-protein | no | no | 0.614 | 0.759 | 0.324 | 1e-37 | |
| O49839 | 426 | Protein kinase 2A, chloro | no | no | 0.557 | 0.638 | 0.321 | 6e-37 | |
| Q9LFP7 | 493 | Probable receptor-like pr | no | no | 0.551 | 0.545 | 0.333 | 8e-37 | |
| O49840 | 426 | Protein kinase 2B, chloro | no | no | 0.559 | 0.640 | 0.314 | 6e-36 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/489 (70%), Positives = 403/489 (82%), Gaps = 7/489 (1%)
Query: 1 MGARCSKLS-LCWWPSNLKSNLHESSDLENG--STDALPGFREFNLDQLRAATSGFCADN 57
MG SKLS LC + +SN + E G ++ LP FREF+++ +R ATSGF A+N
Sbjct: 1 MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIG 117
IVSEHGE+APNVVYKG ++ R IAVKRFNR +WPDSRQFLEEA+AVG LR+ R+ NL+G
Sbjct: 61 IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120
Query: 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
CC E EERLL+AEFMPNETL+KHLFHWE+QPMKWAMR+RVAL++AQAL+YC+SKGRALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 237
DLN YR+LFD D NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
LLLDLLSGKHIPPSHALDLIR +N MLMDS LEG FS+DDGTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300
Query: 298 PNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILE 357
PN KSLV+++ PLQK+ E+ S+ L+G+P+ +T L+PLGEAC R DLTAIHEI+E
Sbjct: 301 PNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTT----ALSPLGEACLRSDLTAIHEIIE 356
Query: 358 KVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS 417
K+GYKDDEG ELSFQMWTDQ+Q+TL KK+GD+AFR KDF AIECY+ FI+ GTM S
Sbjct: 357 KLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGS 416
Query: 418 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 477
PTV AR+ LCYL++DMP+EAL +AMQAQVISP W A YLQA AL LG N+A LKD
Sbjct: 417 PTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKD 476
Query: 478 GTNLEAKKH 486
G LE+K++
Sbjct: 477 GAMLESKRN 485
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/454 (66%), Positives = 364/454 (80%), Gaps = 2/454 (0%)
Query: 35 LPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS 94
+P F EF+ L+AAT+ F +DNIVSE GEKAPN+VYKG + RWIAVK+F + AWP+
Sbjct: 55 IPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEP 114
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
+QF EEA VG LR RL NLIG CC+G+ERLLVAEFMPN+TL+KHLFHWENQ ++WAMR
Sbjct: 115 KQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMR 174
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214
+RV Y+A+ALDYCS++GR LYHDLN YR+LFD+DG+PRLSCFGLMKNSRDGKSYSTNLA
Sbjct: 175 LRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLA 234
Query: 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274
+TPPEYLR GRV PESV YSFGT+LLDLLSGKHIPPSHALD+IRGKN ++LMDS LEG F
Sbjct: 235 YTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKF 294
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGI-PHGTASTKQ 333
S ++ T +V LAS+CLQYEPRERPN K LVA+L PLQ +++VPSY ++GI A +
Sbjct: 295 STEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTP 354
Query: 334 TITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAA 393
L+PLGEACSR+DLTAIH+IL Y+DDEG NELSFQ WT Q+++ L+++KRGD +
Sbjct: 355 QRPLSPLGEACSRMDLTAIHQILVMTHYRDDEG-TNELSFQEWTQQMKDMLDARKRGDQS 413
Query: 394 FRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT 453
FR KDF TAI+CY+ FID GTMVSPTVF RR LCYLL D P AL DAMQAQ + PDWPT
Sbjct: 414 FREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPT 473
Query: 454 AFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHR 487
AFY+Q+ AL L MN DA + L + LE K+ R
Sbjct: 474 AFYMQSVALAKLNMNTDAADMLNEAAQLEEKRQR 507
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/462 (47%), Positives = 308/462 (66%), Gaps = 18/462 (3%)
Query: 24 SSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAV 83
SS+ NG + P +F+ L+ AT+ F +NIVS+ + +VV+KG + ++A+
Sbjct: 22 SSEPRNGGGED-PPLTKFSFSALKTATNHFSPENIVSD---QTSDVVFKGRLQNGGFVAI 77
Query: 84 KRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH 143
KRFN AW D + FLEEA+ VG LR +RLVNLIG CC+G++R LVA+FM N+TL+K LF
Sbjct: 78 KRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQ 137
Query: 144 WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203
+ Q M W++R+RVA ++A+ALDYC++ G A Y++L+ Y++LFD+DG+ LSCFGLMK
Sbjct: 138 RKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMKEI 197
Query: 204 RDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL 263
+ + + TG V PE+V+Y FGT+L++LLSGK IPPSHA ++I KN
Sbjct: 198 NNDQ-------------ITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRKNVF 244
Query: 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMG 323
LMD L+G FS D+ + +LAS+CL+YE +E PN K +VA+L LQ E PSY ++
Sbjct: 245 KLMDPYLKGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVE 304
Query: 324 IPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQET 383
+ + + L+PLGEAC R+DL +IH IL GY DD+ I ELSF+ W +++E
Sbjct: 305 MTNQEKDASSSSNLSPLGEACLRMDLASIHSILVLAGYDDDKDII-ELSFEEWIQEVKEL 363
Query: 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQ 443
+ ++ GD AF +DF TAI CY+ F++ ++V P+V+ARR L YL D P++AL D M
Sbjct: 364 QDVRRNGDRAFVEQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMH 423
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485
AQ + PDWPTAFYLQ+ AL L MN D+ +TLK+ LE KK
Sbjct: 424 AQGVFPDWPTAFYLQSVALAKLDMNTDSADTLKEAALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 164/307 (53%), Gaps = 34/307 (11%)
Query: 36 PGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRW----------IAVKR 85
P + F+ +L++AT F D+++ GE V+KG +DE IAVK+
Sbjct: 51 PNLKSFSFAELKSATRNFRPDSVL---GEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKK 107
Query: 86 FNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH-- 143
N+ W +++L E +G LV LIG C E E RLLV EFMP +L HLF
Sbjct: 108 LNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 167
Query: 144 WENQPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202
QP+ W +R++VAL A+ L + SS+ R +Y D T IL D + N +LS FGL K+
Sbjct: 168 LYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKD 227
Query: 203 SRDG-KSY-STNL----AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP----PSH 252
G KS+ ST + + PEYL TG + +S VYSFG +LL+LLSG+ PS
Sbjct: 228 GPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSG 287
Query: 253 ALDLIR-GKNFLM-------LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
+L+ K +L+ ++D+ L+ +S ++ ++ L+ RCL E + RPN +V
Sbjct: 288 ERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVV 347
Query: 305 ASLTPLQ 311
+ L +Q
Sbjct: 348 SHLEHIQ 354
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 164/307 (53%), Gaps = 34/307 (11%)
Query: 36 PGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRW----------IAVKR 85
P + F +L+AAT F D+++ E G + V+KG +DE IAVK+
Sbjct: 52 PNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAVKK 108
Query: 86 FNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE 145
N+ W +++L E +G LV LIG C E E RLLV EFMP +L HLF
Sbjct: 109 LNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 168
Query: 146 N--QPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202
+ QP+ W +R++VAL A+ L + +++ +Y D T IL D + N +LS FGL K+
Sbjct: 169 SYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKD 228
Query: 203 SRDG-KSY-STNL----AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-----KHIPPS 251
G KS+ ST + + PEYL TG + +S VYS+G +LL++LSG K+ PP
Sbjct: 229 GPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPG 288
Query: 252 H------ALDLIRGKNFLM-LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
A L+ K L ++D+ L+ +S ++ ++ LA RCL +E + RPN +V
Sbjct: 289 EQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVV 348
Query: 305 ASLTPLQ 311
+ L +Q
Sbjct: 349 SHLEHIQ 355
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 158/312 (50%), Gaps = 35/312 (11%)
Query: 39 REFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRW----------IAVKRFNR 88
+ F+ ++L+ AT F +D++V GE V++G +DE IAVKR N
Sbjct: 47 KSFSFNELKLATRNFRSDSVV---GEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNP 103
Query: 89 SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWEN-- 146
+ R++L E +G L LV LIG C E E+RLLV EFM +L HLF N
Sbjct: 104 DGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKD 163
Query: 147 -QPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204
+P+ W +R++VAL A+ L + S + +Y D+ IL D D N +LS FGL ++
Sbjct: 164 FKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGP 223
Query: 205 DG-KSYST-----NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHAL 254
G +SY + + PEY+ TG + S VYSFG +LL+LL G+ H P+
Sbjct: 224 MGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQ 283
Query: 255 DLI--------RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306
+L+ + L+++D+ L + + L +A +CL +EP+ RP +V +
Sbjct: 284 NLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRA 343
Query: 307 LTPLQKEAEVPS 318
L LQ P+
Sbjct: 344 LVQLQDSVVKPA 355
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 168/342 (49%), Gaps = 42/342 (12%)
Query: 39 REFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRW----------IAVKRFNR 88
+ F ++L+ AT F D+++ GE V+KG +DE IAVK+ N+
Sbjct: 53 KSFTFNELKLATRNFRPDSVI---GEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQ 109
Query: 89 SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWEN-- 146
+ R++L E +G L LV LIG C E E RLLV EFM +L HLF
Sbjct: 110 EGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYF 169
Query: 147 QPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205
+P+ W +RV VAL A+ L + S + +Y D+ IL D D N +LS FGL ++
Sbjct: 170 KPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPM 229
Query: 206 GK-SYST-----NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALD 255
G SY + + PEY+ +G + S VYSFG LLL++LSGK H P+ +
Sbjct: 230 GDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEEN 289
Query: 256 LI--------RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
L+ + L+++D+ L+ + ++ + +A +CL +EP+ RP +V +L
Sbjct: 290 LVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRAL 349
Query: 308 TPLQKEAEVPSYT-------LMGIPHGTA-STKQTITLTPLG 341
LQ PS T +G GT S+++ T P G
Sbjct: 350 QQLQDNLGKPSQTNPVKDTKKLGFKTGTTKSSEKRFTQKPFG 391
|
Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 152/314 (48%), Gaps = 42/314 (13%)
Query: 36 PGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRW----------IAVKR 85
P + F ++L+ AT F DN++ GE V+KG +D+ +AVK+
Sbjct: 69 PNLKAFTFNELKNATKNFRQDNLL---GEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQ 125
Query: 86 FNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE 145
+ +++L E +G L LV L+G C EGE RLLV EFMP +L HLF
Sbjct: 126 LKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRG 185
Query: 146 NQPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN-- 202
QP+ WA+R++VA+ A+ L + +K + +Y D IL D D N +LS FGL K
Sbjct: 186 AQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGP 245
Query: 203 SRDGKSYSTNL----AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR 258
+ D ST + + PEY+ TGR+ +S VYSFG +LL+L+SG+ A+D
Sbjct: 246 TGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGR-----RAMDNSN 300
Query: 259 GKN-----------------FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 301
G N +MD+ L G + LA +CL + + RP
Sbjct: 301 GGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMS 360
Query: 302 SLVASLTPLQKEAE 315
++ +L L+ A+
Sbjct: 361 EVLVTLEQLESVAK 374
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 160/303 (52%), Gaps = 34/303 (11%)
Query: 38 FREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRW----------IAVKRFN 87
R+F + L+ +T F ++++ GE V+KG ++E+ +AVK N
Sbjct: 127 LRKFTFNDLKLSTRNFRPESLL---GEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 183
Query: 88 RSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ 147
+++L E +G L LV L+G C E ++RLLV EFMP +L HLF +
Sbjct: 184 PDGLQGHKEWLAEINFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-RSL 242
Query: 148 PMKWAMRVRVALYLAQALDYCSSKG--RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205
P+ W++R+++AL A+ L + + +Y D T IL D D N +LS FGL K++ D
Sbjct: 243 PLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPD 302
Query: 206 -GKSYST-----NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-----KHIPPS-HA 253
GK++ + + PEY+ TG + +S VYSFG +LL++L+G K+ P H
Sbjct: 303 EGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 362
Query: 254 L------DLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
L L+ + F L+D LEGHFS ++ +LA++CL +P+ RP +V +L
Sbjct: 363 LVEWARPHLLDKRRFYRLLDPRLEGHFSIKGAQKVTQLAAQCLSRDPKIRPKMSDVVEAL 422
Query: 308 TPL 310
PL
Sbjct: 423 KPL 425
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 148/305 (48%), Gaps = 32/305 (10%)
Query: 36 PGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRW----------IAVKR 85
P + F ++L+ AT F D+++ E G V+KG +D +AVK+
Sbjct: 66 PNLKAFTFNELKNATRNFRPDSLLGEGGF---GYVFKGWIDGTTLTASKPGSGIVVAVKK 122
Query: 86 FNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE 145
+ +++L E +G L LV L+G C EGE RLLV EFMP +L HLF
Sbjct: 123 LKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRG 182
Query: 146 NQPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN-- 202
QP+ WA+R++VA+ A+ L + +K + +Y D IL D + N +LS FGL K
Sbjct: 183 AQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGP 242
Query: 203 SRDGKSYSTNL----AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR 258
+ D ST + + PEY+ TGR+ +S VYSFG +LL+LLSG+ + + +
Sbjct: 243 TGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQ 302
Query: 259 G------------KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306
+ +MD+ L G + LA +CL + + RP ++A
Sbjct: 303 SLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAK 362
Query: 307 LTPLQ 311
L L+
Sbjct: 363 LDQLE 367
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 488 | ||||||
| 255558866 | 487 | receptor protein kinase, putative [Ricin | 0.995 | 0.997 | 0.889 | 0.0 | |
| 297745973 | 490 | unnamed protein product [Vitis vinifera] | 0.995 | 0.991 | 0.871 | 0.0 | |
| 359478579 | 512 | PREDICTED: probable serine/threonine-pro | 0.995 | 0.949 | 0.869 | 0.0 | |
| 224059396 | 477 | predicted protein [Populus trichocarpa] | 0.975 | 0.997 | 0.860 | 0.0 | |
| 22327962 | 489 | putative receptor protein kinase [Arabid | 0.997 | 0.995 | 0.846 | 0.0 | |
| 297796847 | 489 | hypothetical protein ARALYDRAFT_496029 [ | 0.997 | 0.995 | 0.844 | 0.0 | |
| 224106345 | 475 | predicted protein [Populus trichocarpa] | 0.971 | 0.997 | 0.860 | 0.0 | |
| 225440554 | 491 | PREDICTED: probable serine/threonine-pro | 1.0 | 0.993 | 0.832 | 0.0 | |
| 449450772 | 485 | PREDICTED: probable serine/threonine-pro | 0.991 | 0.997 | 0.835 | 0.0 | |
| 224087605 | 491 | predicted protein [Populus trichocarpa] | 1.0 | 0.993 | 0.832 | 0.0 |
| >gi|255558866|ref|XP_002520456.1| receptor protein kinase, putative [Ricinus communis] gi|223540298|gb|EEF41869.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/489 (88%), Positives = 463/489 (94%), Gaps = 3/489 (0%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVS 60
MGARCSKLSLCWWPSNLKSNL+ESSDLENG D LPGF+EF+L+QLRAATSGF D+IVS
Sbjct: 1 MGARCSKLSLCWWPSNLKSNLNESSDLENG--DLLPGFKEFSLEQLRAATSGFSTDHIVS 58
Query: 61 EHGEKAPNVVYKG-LVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC 119
EHGEKAPNVVYKG D++RWIA+KRFN+SAWPDSRQFLEEARAVG LR+ERL NLIGCC
Sbjct: 59 EHGEKAPNVVYKGRFQDDNRWIAIKRFNKSAWPDSRQFLEEARAVGQLRNERLANLIGCC 118
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR+RVAL+LAQAL+YCSSKGRALYHDL
Sbjct: 119 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRLRVALFLAQALEYCSSKGRALYHDL 178
Query: 180 NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL 239
N YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL
Sbjct: 179 NAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL 238
Query: 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
LDLLSGKHIPPSHA+DLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ+EPRERPN
Sbjct: 239 LDLLSGKHIPPSHAIDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQHEPRERPN 298
Query: 300 AKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKV 359
AK+LV +LT LQKE EVPSY LMGIPHG AS K T++LTPLGEACSR+DLTAIHEIL+KV
Sbjct: 299 AKTLVTALTHLQKETEVPSYALMGIPHGAASPKPTVSLTPLGEACSRMDLTAIHEILQKV 358
Query: 360 GYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT 419
GYKDDEGIANELSFQMWTDQIQETLN KKRGDAAFR KDF TAI+CYT FID GTMVSPT
Sbjct: 359 GYKDDEGIANELSFQMWTDQIQETLNCKKRGDAAFRTKDFATAIDCYTQFIDVGTMVSPT 418
Query: 420 VFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGT 479
VFARRCLCYL+SDMPQEALGDAMQAQ +SP+WPTAFYLQAAALF LGM++DAQETLKDGT
Sbjct: 419 VFARRCLCYLISDMPQEALGDAMQAQAVSPEWPTAFYLQAAALFSLGMDSDAQETLKDGT 478
Query: 480 NLEAKKHRN 488
LEA+KHRN
Sbjct: 479 TLEAQKHRN 487
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297745973|emb|CBI16029.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/490 (87%), Positives = 454/490 (92%), Gaps = 4/490 (0%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGST---DALPGFREFNLDQLRAATSGFCADN 57
MGARCSK SLCWWP +LKSN +S DLENG D+LP F EF+LDQLRAATSGF +DN
Sbjct: 1 MGARCSKFSLCWWP-HLKSNSQDSFDLENGGKNEGDSLPSFGEFSLDQLRAATSGFSSDN 59
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIG 117
IVSEHGEKAPNVVYKG +++DRWIAVKRFN+SAWPDSRQFLEEARAVG LR+ERL NLIG
Sbjct: 60 IVSEHGEKAPNVVYKGKLEDDRWIAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLIG 119
Query: 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
CCCEGEERLLVAEFMPNETLSKHLFHWE QPMKWAMR+RVALYLAQAL+YCSSKGRALYH
Sbjct: 120 CCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYH 179
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 237
DLN YR+LFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV ESVVYSFGT
Sbjct: 180 DLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTAESVVYSFGT 239
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER
Sbjct: 240 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 299
Query: 298 PNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILE 357
PNA+SLV SLTPLQKE EVPSY LMGI T S +T+ LTPLGEACSR+DLTAIHEILE
Sbjct: 300 PNARSLVTSLTPLQKETEVPSYVLMGIQQETVSPAETLPLTPLGEACSRMDLTAIHEILE 359
Query: 358 KVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS 417
KVGYKDDEG+ANELSFQMWT+QIQETLNSKKRGD AFRAKDF TAIECYT FIDGGTMVS
Sbjct: 360 KVGYKDDEGVANELSFQMWTNQIQETLNSKKRGDTAFRAKDFTTAIECYTQFIDGGTMVS 419
Query: 418 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 477
PTVFARRCLCYL+++MPQEALGDAMQAQV+SPDW TAFYLQAAALF LGM+NDA+ETLKD
Sbjct: 420 PTVFARRCLCYLMNEMPQEALGDAMQAQVVSPDWSTAFYLQAAALFSLGMDNDARETLKD 479
Query: 478 GTNLEAKKHR 487
GT LEAK++R
Sbjct: 480 GTTLEAKRNR 489
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478579|ref|XP_002280021.2| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/490 (86%), Positives = 452/490 (92%), Gaps = 4/490 (0%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGST---DALPGFREFNLDQLRAATSGFCADN 57
MGARCSK SLCWWP +LKSN +S DLENG D+LP F EF+LDQLRAATSGF +DN
Sbjct: 1 MGARCSKFSLCWWP-HLKSNSQDSFDLENGGKNEGDSLPSFGEFSLDQLRAATSGFSSDN 59
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIG 117
IVSEHGEKAPNVVYKG +++DRWIAVKRFN+SAWPDSRQFLEEARAVG LR+ERL NLIG
Sbjct: 60 IVSEHGEKAPNVVYKGKLEDDRWIAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLIG 119
Query: 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
CCCEGEERLLVAEFMPNETLSKHLFHWE QPMKWAMR+RVALYLAQAL+YCSSKGRALYH
Sbjct: 120 CCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYH 179
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 237
DLN YR+LFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV ESVVYSFGT
Sbjct: 180 DLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTAESVVYSFGT 239
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER
Sbjct: 240 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 299
Query: 298 PNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILE 357
PNA+SLV SLTPLQKE EVPSY LMGI T S +T+ LTPLGEACSR+DLTAIHEILE
Sbjct: 300 PNARSLVTSLTPLQKETEVPSYVLMGIQQETVSPAETLPLTPLGEACSRMDLTAIHEILE 359
Query: 358 KVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS 417
KVGYKDDEG+ANELSFQMWT+QIQETLNSKKRGD AFRAKDF TAIECYT FIDGGTMVS
Sbjct: 360 KVGYKDDEGVANELSFQMWTNQIQETLNSKKRGDTAFRAKDFTTAIECYTQFIDGGTMVS 419
Query: 418 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 477
PTVFARRCLCYL+++MPQEALGDAMQAQV+SPDW TAFYLQAAALF LGM+NDA+ETLKD
Sbjct: 420 PTVFARRCLCYLMNEMPQEALGDAMQAQVVSPDWSTAFYLQAAALFSLGMDNDARETLKD 479
Query: 478 GTNLEAKKHR 487
GT LE KK +
Sbjct: 480 GTTLEGKKQK 489
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224059396|ref|XP_002299839.1| predicted protein [Populus trichocarpa] gi|222847097|gb|EEE84644.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/489 (86%), Positives = 451/489 (92%), Gaps = 13/489 (2%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVS 60
MGARCSKLSLCWWPS+LKSNL+ SSDLE ++L+QLRAATSGF +DNIVS
Sbjct: 1 MGARCSKLSLCWWPSHLKSNLNYSSDLE------------YSLEQLRAATSGFSSDNIVS 48
Query: 61 EHGEKAPNVVYKG-LVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC 119
EHGEKAPNVVY+G L ++DRWIAVKRFN+SAWPDSRQFLEEARAVG LR+ERL NLIGCC
Sbjct: 49 EHGEKAPNVVYRGKLQEDDRWIAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLIGCC 108
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR+RVALYLAQAL+YCSSKGRALYHD
Sbjct: 109 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRLRVALYLAQALEYCSSKGRALYHDF 168
Query: 180 NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL 239
N YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESVVYSFGTLL
Sbjct: 169 NAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLL 228
Query: 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ+E RERPN
Sbjct: 229 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQFEARERPN 288
Query: 300 AKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKV 359
AKSLV +LTPL K+ +VPSY LMGIPHGT S KQT++LTPLGEACSRLDLTAIHE+LEKV
Sbjct: 289 AKSLVTALTPLLKDTQVPSYILMGIPHGTESPKQTMSLTPLGEACSRLDLTAIHEMLEKV 348
Query: 360 GYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT 419
GY DDEGIANELSFQMWTDQIQETLN KKRGDAAFRAKDF AI+CYT FIDGGTMVSPT
Sbjct: 349 GYNDDEGIANELSFQMWTDQIQETLNCKKRGDAAFRAKDFNAAIDCYTQFIDGGTMVSPT 408
Query: 420 VFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGT 479
VFARRCLCYL+SD+PQ+ALGDAMQAQ +SP+WPTAFYLQAA+LF LGM+ DAQETLKDG+
Sbjct: 409 VFARRCLCYLISDLPQQALGDAMQAQAVSPEWPTAFYLQAASLFSLGMDTDAQETLKDGS 468
Query: 480 NLEAKKHRN 488
+LEAK H N
Sbjct: 469 SLEAKNHGN 477
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22327962|ref|NP_200709.2| putative receptor protein kinase [Arabidopsis thaliana] gi|9759232|dbj|BAB09644.1| protein kinase-like protein [Arabidopsis thaliana] gi|19715586|gb|AAL91617.1| AT5g59010/k19m22_210 [Arabidopsis thaliana] gi|111074228|gb|ABH04487.1| At5g59010 [Arabidopsis thaliana] gi|332009746|gb|AED97129.1| putative receptor protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/488 (84%), Positives = 453/488 (92%), Gaps = 1/488 (0%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVS 60
MG RCSKLSLCWWP++LKS +E+SDL+NG TD LP F EF+ DQLRAAT GF D+IVS
Sbjct: 1 MGPRCSKLSLCWWPTHLKSTHNEASDLDNG-TDDLPSFTEFSFDQLRAATCGFSTDSIVS 59
Query: 61 EHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC 120
EHG KAPNVVYKG +++DRWIAVKRFNRSAWPD+RQFLEEA+AVG LR+ERL NLIG CC
Sbjct: 60 EHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWPDTRQFLEEAKAVGQLRNERLANLIGFCC 119
Query: 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLN 180
EG+ERLLVAEFMP ETLSKHLFHW++QPMKW+MR+RVALYLAQAL+YCSSKGRALYHDLN
Sbjct: 120 EGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYHDLN 179
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 240
YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL
Sbjct: 180 AYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 239
Query: 241 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 300
DLLSGKHIPPSHALDLIRGKNFLMLMDSCL+GHFSNDDGT+LVRLASRCLQYE RERPN
Sbjct: 240 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARERPNV 299
Query: 301 KSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVG 360
KSLV+SL PLQKE ++PS+ LMGIPHG AS K+T +LTPLG+ACSR DLTAIHEILEKVG
Sbjct: 300 KSLVSSLAPLQKETDIPSHVLMGIPHGAASPKETTSLTPLGDACSRHDLTAIHEILEKVG 359
Query: 361 YKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV 420
YKDDEG+ANELSFQ+WTDQIQETLNSKK+GDAAF+ KDF TA+ECYT FI+ GTMVSPTV
Sbjct: 360 YKDDEGVANELSFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMVSPTV 419
Query: 421 FARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTN 480
FARRCLCYL+S+MPQEALGDAMQAQV+SP+WPTAFYLQAAALF LGM+ DA ETLKDGT+
Sbjct: 420 FARRCLCYLMSNMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLKDGTS 479
Query: 481 LEAKKHRN 488
LEAKKH N
Sbjct: 480 LEAKKHNN 487
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297796847|ref|XP_002866308.1| hypothetical protein ARALYDRAFT_496029 [Arabidopsis lyrata subsp. lyrata] gi|297312143|gb|EFH42567.1| hypothetical protein ARALYDRAFT_496029 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/488 (84%), Positives = 452/488 (92%), Gaps = 1/488 (0%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVS 60
MG RCSKLSLCWWP++LKS +++SDL+NG TD LP F EF+ DQLRAAT GF D+IVS
Sbjct: 1 MGPRCSKLSLCWWPTHLKSTHNDASDLDNG-TDDLPSFTEFSFDQLRAATCGFSTDSIVS 59
Query: 61 EHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC 120
EHG KAPNVVYKG +++DRWIAVKRFNRSAWPD+RQFLEEA+AVG LR+ERL NLIG CC
Sbjct: 60 EHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWPDTRQFLEEAKAVGQLRNERLANLIGFCC 119
Query: 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLN 180
EG+ERLLVAEFMP ETLSKHLFHW++QPMKW+MR+RVALYLAQAL+YCSSKGRALYHDLN
Sbjct: 120 EGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYHDLN 179
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 240
YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL
Sbjct: 180 AYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 239
Query: 241 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 300
DLLSGKHIPPSHALDLIRGKNFLMLMDSCL+GHFSNDDGT+LVRLASRCLQYE RERPN
Sbjct: 240 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARERPNV 299
Query: 301 KSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVG 360
KSLV+SL PLQKE ++PSY LMGIPHG S K+T +LTPLG+ACSRLDLTAIHEILEKVG
Sbjct: 300 KSLVSSLAPLQKETDIPSYVLMGIPHGATSPKETTSLTPLGDACSRLDLTAIHEILEKVG 359
Query: 361 YKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV 420
YKDDEG+ANELSFQ+WTDQIQETLNSKK+GDAAF+ KDF TA+ECYT FI+ GTMVSPTV
Sbjct: 360 YKDDEGVANELSFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMVSPTV 419
Query: 421 FARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTN 480
FARRCLCYL+S+MPQEALGDAMQAQV+SP+WPTAFYLQAAALF LGM+ DA ETLKDGT+
Sbjct: 420 FARRCLCYLMSNMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLKDGTS 479
Query: 481 LEAKKHRN 488
LEAKK N
Sbjct: 480 LEAKKQNN 487
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224106345|ref|XP_002314137.1| predicted protein [Populus trichocarpa] gi|222850545|gb|EEE88092.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/487 (86%), Positives = 443/487 (90%), Gaps = 13/487 (2%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVS 60
MG RCSKLSLCWWPS+LKSNL+ SDLE ++L+QLRAATSGF +DNIVS
Sbjct: 1 MGGRCSKLSLCWWPSHLKSNLNYPSDLE------------YSLEQLRAATSGFSSDNIVS 48
Query: 61 EHGEKAPNVVYKG-LVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC 119
EHGEKAPNVVY+G L ++DRWIAVKRFN+SAWPDSRQFLEEARAVG LR+ERL NLIGCC
Sbjct: 49 EHGEKAPNVVYRGKLQEDDRWIAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLIGCC 108
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
CEG+ERLLVAEFMPNETLSKHLFHWENQPMKW MR+RVALYLAQALD CSSKGRALYHDL
Sbjct: 109 CEGQERLLVAEFMPNETLSKHLFHWENQPMKWTMRLRVALYLAQALDCCSSKGRALYHDL 168
Query: 180 NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL 239
N YRILFDQD NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESVVYSFGTLL
Sbjct: 169 NAYRILFDQDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLL 228
Query: 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE RERPN
Sbjct: 229 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEARERPN 288
Query: 300 AKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKV 359
AKSLV++L PLQKE EVPSY LMGIPHGT S KQT+ LTPLGEACSRLDLTAIH+ILEKV
Sbjct: 289 AKSLVSALAPLQKETEVPSYILMGIPHGTQSPKQTMLLTPLGEACSRLDLTAIHQILEKV 348
Query: 360 GYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT 419
GYKDDEGIANELSFQMWTDQIQETLN KK GDAAFR KDF TAI+CYT FIDGGTMVSPT
Sbjct: 349 GYKDDEGIANELSFQMWTDQIQETLNCKKHGDAAFRTKDFNTAIDCYTQFIDGGTMVSPT 408
Query: 420 VFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGT 479
VFARR LCYL+SDMPQ+ALGD MQAQ +SP+WPTAFYLQAA LF LGM++DAQETLKDGT
Sbjct: 409 VFARRSLCYLISDMPQQALGDTMQAQALSPEWPTAFYLQAATLFSLGMDSDAQETLKDGT 468
Query: 480 NLEAKKH 486
LEAK H
Sbjct: 469 YLEAKNH 475
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225440554|ref|XP_002276280.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297740276|emb|CBI30458.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/491 (83%), Positives = 446/491 (90%), Gaps = 3/491 (0%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGST---DALPGFREFNLDQLRAATSGFCADN 57
MGARCSK S CWW S+LK ++ + SDLENG ++LP F EF+LDQL+AATSGF +DN
Sbjct: 1 MGARCSKFSFCWWQSHLKPSVLDPSDLENGGKADRNSLPSFTEFSLDQLKAATSGFSSDN 60
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIG 117
IVSEHGEKAPN+VYKG +D DRWIAVKRFN+ AWPDSRQF+EEAR+VG LR+ERL NLIG
Sbjct: 61 IVSEHGEKAPNIVYKGKLDADRWIAVKRFNKLAWPDSRQFVEEARSVGNLRNERLANLIG 120
Query: 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
CCCEG+ERLLVAEFMPNETL+KHLFHWE QPMKWAMR+RVALYLAQAL+YCSSKGRALYH
Sbjct: 121 CCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYH 180
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 237
DLN YR+LFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESVVYSFGT
Sbjct: 181 DLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGT 240
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE RER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEARER 300
Query: 298 PNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILE 357
PNAKSLV +L LQKE EVPSY LMGI H TAS + ++LTP GEAC R+DLTAIHEIL+
Sbjct: 301 PNAKSLVTALMSLQKETEVPSYILMGIAHDTASPAEPLSLTPFGEACLRMDLTAIHEILD 360
Query: 358 KVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS 417
K+GYKDDEGIANELSFQMWT+Q+QETLNSKK GD AFRAKDF TAI+CYT FIDGGTMVS
Sbjct: 361 KIGYKDDEGIANELSFQMWTNQMQETLNSKKHGDTAFRAKDFTTAIDCYTQFIDGGTMVS 420
Query: 418 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 477
PTV+ARRCL YL++DMPQEALGDAMQAQV+SP+W TAFYLQAAALF LGM+ DAQETLKD
Sbjct: 421 PTVYARRCLSYLMNDMPQEALGDAMQAQVVSPEWATAFYLQAAALFSLGMDTDAQETLKD 480
Query: 478 GTNLEAKKHRN 488
GTNLE KK +N
Sbjct: 481 GTNLEVKKSKN 491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449450772|ref|XP_004143136.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] gi|449496644|ref|XP_004160187.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/487 (83%), Positives = 445/487 (91%), Gaps = 3/487 (0%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVS 60
MGARCS+ LC+WPS ++SNL++ S EN DALPGF E++ DQLRAATSGF ++NIVS
Sbjct: 1 MGARCSRFGLCFWPSQIESNLNDLSCAEN--EDALPGFCEYSFDQLRAATSGFSSENIVS 58
Query: 61 EHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC 120
EHGEKAPNVVY+G +++DR IAVKRFN+SAWPDSRQFL+EARAVG LR++RL NLIGCCC
Sbjct: 59 EHGEKAPNVVYRGKLEDDRVIAVKRFNKSAWPDSRQFLDEARAVGQLRNQRLANLIGCCC 118
Query: 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLN 180
EG E+LLVAEFMPNETLS+HLFHWE QPMKWAMR+RVALYLAQAL+YCSSKGRALYHDLN
Sbjct: 119 EGNEKLLVAEFMPNETLSRHLFHWETQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLN 178
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 240
YR+LFDQDGNPRLSCFGLMKNSRDGKSYSTNL+FTPPEY+RTGR+ ESVVYSFGTLLL
Sbjct: 179 AYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLSFTPPEYMRTGRISSESVVYSFGTLLL 238
Query: 241 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 300
DLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE RERPN
Sbjct: 239 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYELRERPNV 298
Query: 301 KSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVG 360
KSLV +LT LQKE EVPSY LMGI HG AS+KQ ++L+P GEACSR DLTAIHEILEK G
Sbjct: 299 KSLVIALTALQKETEVPSYVLMGISHGNASSKQ-MSLSPFGEACSRTDLTAIHEILEKAG 357
Query: 361 YKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV 420
YKDDEG+ANELSFQMWT QIQETLNSKKRGD+AFRAKDF TAI+CYT FIDGGTMVSPTV
Sbjct: 358 YKDDEGVANELSFQMWTSQIQETLNSKKRGDSAFRAKDFVTAIDCYTQFIDGGTMVSPTV 417
Query: 421 FARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTN 480
FARR LCYL+SDMPQEALGDAMQAQV+SPDWPTA YLQAAALF LGM NDAQETL+DGT+
Sbjct: 418 FARRSLCYLMSDMPQEALGDAMQAQVVSPDWPTALYLQAAALFILGMENDAQETLRDGTS 477
Query: 481 LEAKKHR 487
LE KK R
Sbjct: 478 LEFKKER 484
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224087605|ref|XP_002308195.1| predicted protein [Populus trichocarpa] gi|222854171|gb|EEE91718.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/491 (83%), Positives = 441/491 (89%), Gaps = 3/491 (0%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGST---DALPGFREFNLDQLRAATSGFCADN 57
MGARCSK SLCW+ S+LK+++ ESSDLENG +A P F EF+ +QL+AATSGF +DN
Sbjct: 1 MGARCSKFSLCWFQSHLKASVLESSDLENGGKSDRNAFPSFTEFSFEQLKAATSGFSSDN 60
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIG 117
IVSEHGEKAPNVVYKG +D D WIAVKRFNR AWPDSRQFLEEAR VG LRSERL NLIG
Sbjct: 61 IVSEHGEKAPNVVYKGKLDNDCWIAVKRFNRLAWPDSRQFLEEARTVGSLRSERLANLIG 120
Query: 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
CCCEGEERLLVAEFMP+ETL+KHLFHWE+QPMKWAMR+RVALYLAQAL+YC SKGRALYH
Sbjct: 121 CCCEGEERLLVAEFMPHETLAKHLFHWESQPMKWAMRLRVALYLAQALEYCCSKGRALYH 180
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 237
DLN YRILFD+DGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESVVYSFGT
Sbjct: 181 DLNAYRILFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGT 240
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
LLLDLLSGKHIPPSHALDLIRGKNFLMLMDS LEGHFS DDGTELVRLASRCLQYE RER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARER 300
Query: 298 PNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILE 357
PNAKSLV +L LQKE EVPSY LMGI TAS+ Q ++LTP GEAC R DLTAIHEILE
Sbjct: 301 PNAKSLVTALLSLQKETEVPSYVLMGIRQETASSTQPLSLTPFGEACLRTDLTAIHEILE 360
Query: 358 KVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS 417
K+GYKDDEGIANELSFQMWT+Q+QETLNSKK GD AFRAKDF TAI+CYT FIDGGTMVS
Sbjct: 361 KIGYKDDEGIANELSFQMWTNQMQETLNSKKHGDTAFRAKDFATAIDCYTQFIDGGTMVS 420
Query: 418 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 477
PTV+ARRCL YL+SDMPQEALGDAMQAQV+SP+W TA YLQAA LF LGM DAQETLKD
Sbjct: 421 PTVYARRCLSYLMSDMPQEALGDAMQAQVVSPEWSTASYLQAACLFSLGMETDAQETLKD 480
Query: 478 GTNLEAKKHRN 488
GTNLEAK+++N
Sbjct: 481 GTNLEAKRNKN 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 488 | ||||||
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.997 | 0.995 | 0.846 | 1.6e-230 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.991 | 0.987 | 0.767 | 2.3e-204 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.989 | 0.991 | 0.716 | 1.3e-189 | |
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.977 | 0.975 | 0.725 | 2.6e-189 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.987 | 0.989 | 0.705 | 1.7e-185 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.934 | 0.890 | 0.667 | 3.6e-169 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.940 | 0.962 | 0.643 | 2.8e-160 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.973 | 0.983 | 0.629 | 1.6e-159 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.926 | 0.924 | 0.621 | 2.7e-155 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.913 | 0.893 | 0.623 | 1.1e-153 |
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2224 (787.9 bits), Expect = 1.6e-230, P = 1.6e-230
Identities = 413/488 (84%), Positives = 453/488 (92%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVS 60
MG RCSKLSLCWWP++LKS +E+SDL+NG TD LP F EF+ DQLRAAT GF D+IVS
Sbjct: 1 MGPRCSKLSLCWWPTHLKSTHNEASDLDNG-TDDLPSFTEFSFDQLRAATCGFSTDSIVS 59
Query: 61 EHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC 120
EHG KAPNVVYKG +++DRWIAVKRFNRSAWPD+RQFLEEA+AVG LR+ERL NLIG CC
Sbjct: 60 EHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWPDTRQFLEEAKAVGQLRNERLANLIGFCC 119
Query: 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLN 180
EG+ERLLVAEFMP ETLSKHLFHW++QPMKW+MR+RVALYLAQAL+YCSSKGRALYHDLN
Sbjct: 120 EGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYHDLN 179
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 240
YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL
Sbjct: 180 AYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 239
Query: 241 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 300
DLLSGKHIPPSHALDLIRGKNFLMLMDSCL+GHFSNDDGT+LVRLASRCLQYE RERPN
Sbjct: 240 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARERPNV 299
Query: 301 KSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVG 360
KSLV+SL PLQKE ++PS+ LMGIPHG AS K+T +LTPLG+ACSR DLTAIHEILEKVG
Sbjct: 300 KSLVSSLAPLQKETDIPSHVLMGIPHGAASPKETTSLTPLGDACSRHDLTAIHEILEKVG 359
Query: 361 YKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV 420
YKDDEG+ANELSFQ+WTDQIQETLNSKK+GDAAF+ KDF TA+ECYT FI+ GTMVSPTV
Sbjct: 360 YKDDEGVANELSFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMVSPTV 419
Query: 421 FARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTN 480
FARRCLCYL+S+MPQEALGDAMQAQV+SP+WPTAFYLQAAALF LGM+ DA ETLKDGT+
Sbjct: 420 FARRCLCYLMSNMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLKDGTS 479
Query: 481 LEAKKHRN 488
LEAKKH N
Sbjct: 480 LEAKKHNN 487
|
|
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1977 (701.0 bits), Expect = 2.3e-204, P = 2.3e-204
Identities = 374/487 (76%), Positives = 425/487 (87%)
Query: 1 MGARCSKLSLCWWPSNLKS-NLHESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIV 59
MGARCSK S C +PS+ KS ++ ES D+ENG P F+EF L+QL++AT GF +DNIV
Sbjct: 1 MGARCSKFSFCLFPSHFKSASVLESPDIENGGK-VWPTFKEFKLEQLKSATGGFSSDNIV 59
Query: 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC 119
SEHGEKAPNVVY+G +D+ R IAVKRFNR AW D RQFL+EA+AVG LRS+RL NLIGCC
Sbjct: 60 SEHGEKAPNVVYRGRLDDGRLIAVKRFNRLAWADHRQFLDEAKAVGSLRSDRLANLIGCC 119
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
EGEERLLVAEFMP+ETL+KHLFHWEN PMKWAMR+RVAL LAQAL+YCS+KGRALYHDL
Sbjct: 120 FEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRLRVALCLAQALEYCSNKGRALYHDL 179
Query: 180 NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL 239
N YR+LFD+DGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESVV+SFGT+L
Sbjct: 180 NAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVFSFGTVL 239
Query: 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
LDL+SGKHIPPSHALDLIRGKN MLMDS LEGHFSN+DGTELVRLA+RCLQYE RERPN
Sbjct: 240 LDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGHFSNEDGTELVRLATRCLQYEARERPN 299
Query: 300 AKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQT-ITLTPLGEACSRLDLTAIHEILEK 358
KSLV SL LQKE++V SY LMGIPH T + +++ ++LTP G+AC R+DLTAI EIL K
Sbjct: 300 VKSLVTSLVTLQKESDVASYVLMGIPHETEAEEESPLSLTPFGDACLRVDLTAIQEILSK 359
Query: 359 VGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP 418
+GYKDDEGIANELSFQMWT+Q+QE+LNSKK+GD AFR+KDF TA++CYT FIDGGTMVSP
Sbjct: 360 IGYKDDEGIANELSFQMWTNQMQESLNSKKQGDLAFRSKDFTTAVDCYTQFIDGGTMVSP 419
Query: 419 TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDG 478
TV ARRCL YL++D QEAL DA+QAQV+SPDWPTA YLQAA LF LGM DAQ+ LKDG
Sbjct: 420 TVHARRCLSYLMNDNAQEALTDALQAQVVSPDWPTALYLQAACLFKLGMEADAQQALKDG 479
Query: 479 TNLEAKK 485
T LEAKK
Sbjct: 480 TTLEAKK 486
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1838 (652.1 bits), Expect = 1.3e-189, P = 1.3e-189
Identities = 351/490 (71%), Positives = 405/490 (82%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLEN---GSTDALPGFREFNLDQLRAATSGFCADN 57
MG SKL S+ + + H + L+ G + LP FREF+++ LR ATSGF +N
Sbjct: 1 MGCEVSKLCAFCCVSDPEGSNHGVTGLDEDRRGEGNDLPQFREFSIETLRNATSGFATEN 60
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIG 117
IVSEHGEKAPNVVYKG +D R IAVKRFNR AWPDSRQFLEEA+AVG LR+ R+ NL+G
Sbjct: 61 IVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRKAWPDSRQFLEEAKAVGQLRNYRMANLLG 120
Query: 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
CC EGEERLLVAEFMPNETL+KHLFHWE+QPMKWAMR+RVAL++AQAL+YC+ KGRALYH
Sbjct: 121 CCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRALYH 180
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 237
DLN YR+LFD D NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESV+YS+GT
Sbjct: 181 DLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSYGT 240
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
LLLDLLSGKHIPPSHALDLIR +N ML+DSCLEG FS+DDGTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEPRER 300
Query: 298 PNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILE 357
PN KSLV ++ PLQK+ E PS+ LMGIP S+ T L+PLGEAC R DLTAIHEILE
Sbjct: 301 PNPKSLVTAMIPLQKDLETPSHQLMGIP----SSASTTPLSPLGEACLRTDLTAIHEILE 356
Query: 358 KVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS 417
K+ YKDDEG A ELSFQMWT+Q+Q++LN KK+GD AFR K+F AI+CY+ FI+GGTMVS
Sbjct: 357 KLSYKDDEGAATELSFQMWTNQMQDSLNFKKKGDVAFRHKEFANAIDCYSQFIEGGTMVS 416
Query: 418 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 477
PTV+ARR LCYL+++MPQEAL DAMQAQVISP W A YLQA AL LG N+A LKD
Sbjct: 417 PTVYARRSLCYLMNEMPQEALNDAMQAQVISPAWHIASYLQAVALSALGQENEAHAALKD 476
Query: 478 GTNLEAKKHR 487
G+ LE+K++R
Sbjct: 477 GSMLESKRNR 486
|
|
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1835 (651.0 bits), Expect = 2.6e-189, P = 2.6e-189
Identities = 354/488 (72%), Positives = 407/488 (83%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGSTDAL---PGFREFNLDQLRAATSGFCADN 57
MG +CS LS C S+ K+ + E+ D++NG + + P FRE+ L+QL+AATSGF +
Sbjct: 1 MGGQCSSLSCCRNTSH-KTAVLEAPDVDNGESSEITDVPNFREYTLEQLKAATSGFAVEY 59
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIG 117
IVSEHGEKAPNVVYKG ++ + IAVKRF R AWPDSRQFLEEAR+VG LRSER+ NL+G
Sbjct: 60 IVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQLRSERMANLLG 119
Query: 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
CCCEG+ERLLVAEFMPNETL+KHLFHWE QPMKW MR+RV LYLAQAL+YC+SKGR LYH
Sbjct: 120 CCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYH 179
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 237
DLN YR+LFD++ NPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGR+ PESV+YSFGT
Sbjct: 180 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGT 239
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
LLLDLLSGKHIPPSHALDLIR +N L DSCL+G FS+ DGTELVRLASRCLQYE RER
Sbjct: 240 LLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARER 299
Query: 298 PNAKSLVASLTPLQKEAEVPSYTLMGIPH-GTASTKQTITLTPLGEACSRLDLTAIHEIL 356
PN KSLV +LTPLQKE EV S+ LMG+PH G+ S L+PLGEACSR DLTA+ EIL
Sbjct: 300 PNTKSLVTALTPLQKETEVLSHVLMGLPHSGSVSP-----LSPLGEACSRRDLTAMLEIL 354
Query: 357 EKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV 416
EK+GYKDDEG+ NELSF MWTDQ+QE+LNSKK+GD AFR KDF AIECYT FIDGG M+
Sbjct: 355 EKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG-MI 413
Query: 417 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 476
SPTV ARR LCYL+SDMP+EAL DA+QAQVISP W A YLQ+A+L LGM ++Q LK
Sbjct: 414 SPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIALK 473
Query: 477 DGTNLEAK 484
+G+NLEAK
Sbjct: 474 EGSNLEAK 481
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1799 (638.3 bits), Expect = 1.7e-185, P = 1.7e-185
Identities = 345/489 (70%), Positives = 404/489 (82%)
Query: 1 MGARCSKLS-LCWWPSNLKSNLHESS-DLEN-GSTDALPGFREFNLDQLRAATSGFCADN 57
MG SKLS LC + +SN + D E G ++ LP FREF+++ +R ATSGF A+N
Sbjct: 1 MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIG 117
IVSEHGE+APNVVYKG ++ R IAVKRFNR +WPDSRQFLEEA+AVG LR+ R+ NL+G
Sbjct: 61 IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120
Query: 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
CC E EERLL+AEFMPNETL+KHLFHWE+QPMKWAMR+RVAL++AQAL+YC+SKGRALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 237
DLN YR+LFD D NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
LLLDLLSGKHIPPSHALDLIR +N MLMDS LEG FS+DDGTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300
Query: 298 PNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILE 357
PN KSLV+++ PLQK+ E+ S+ L+G+P+ +T L+PLGEAC R DLTAIHEI+E
Sbjct: 301 PNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTT----ALSPLGEACLRSDLTAIHEIIE 356
Query: 358 KVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS 417
K+GYKDDEG ELSFQMWTDQ+Q+TL KK+GD+AFR KDF AIECY+ FI+ GTM S
Sbjct: 357 KLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGS 416
Query: 418 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 477
PTV AR+ LCYL++DMP+EAL +AMQAQVISP W A YLQA AL LG N+A LKD
Sbjct: 417 PTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKD 476
Query: 478 GTNLEAKKH 486
G LE+K++
Sbjct: 477 GAMLESKRN 485
|
|
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1645 (584.1 bits), Expect = 3.6e-169, P = 3.6e-169
Identities = 307/460 (66%), Positives = 366/460 (79%)
Query: 30 GSTDALPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRS 89
G +P F EF+ L+AAT+ F +DNIVSE GEKAPN+VYKG + RWIAVK+F +
Sbjct: 50 GGGGGIPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKM 109
Query: 90 AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPM 149
AWP+ +QF EEA VG LR RL NLIG CC+G+ERLLVAEFMPN+TL+KHLFHWENQ +
Sbjct: 110 AWPEPKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTI 169
Query: 150 KWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY 209
+WAMR+RV Y+A+ALDYCS++GR LYHDLN YR+LFD+DG+PRLSCFGLMKNSRDGKSY
Sbjct: 170 EWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSY 229
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC 269
STNLA+TPPEYLR GRV PESV YSFGT+LLDLLSGKHIPPSHALD+IRGKN ++LMDS
Sbjct: 230 STNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSH 289
Query: 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIP--HG 327
LEG FS ++ T +V LAS+CLQYEPRERPN K LVA+L PLQ +++VPSY ++GI
Sbjct: 290 LEGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEE 349
Query: 328 TASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSK 387
ST Q L+PLGEACSR+DLTAIH+IL Y+DDEG NELSFQ WT Q+++ L+++
Sbjct: 350 APSTPQR-PLSPLGEACSRMDLTAIHQILVMTHYRDDEG-TNELSFQEWTQQMKDMLDAR 407
Query: 388 KRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI 447
KRGD +FR KDF TAI+CY+ FID GTMVSPTVF RR LCYLL D P AL DAMQAQ +
Sbjct: 408 KRGDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCV 467
Query: 448 SPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHR 487
PDWPTAFY+Q+ AL L MN DA + L + LE K+ R
Sbjct: 468 YPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKRQR 507
|
|
| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1561 (554.6 bits), Expect = 2.8e-160, P = 2.8e-160
Identities = 300/466 (64%), Positives = 369/466 (79%)
Query: 23 ESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIA 82
++ + + GST P F EF+L+QLR AT GF ADNIVSEH E+ PN+VYKG +++ R IA
Sbjct: 13 DNKEEDEGST--CPNFLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDGRKIA 70
Query: 83 VKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF 142
VKRF R +WPDS +F+EEA+AVG RSE + NLIGCC EG ERLLVAE+MPNETL+KHLF
Sbjct: 71 VKRFQRLSWPDSLEFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLF 130
Query: 143 HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202
HWE +PMKW MR+RVAL+ A AL+YC+ G LYHDLNTYRILFD+ GNPRLSCFGLMK
Sbjct: 131 HWEKRPMKWEMRLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKC 190
Query: 203 SRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF 262
SR+GKSYSTNLAF PPEYLR G VIPESV +SFGTLLLDL+SG+HIPP+HALDL RGKN+
Sbjct: 191 SREGKSYSTNLAFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNY 250
Query: 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV-PSYTL 321
L+LMDS L+G FS++D TEL+ LASRCL+ EP ERP+ K L+++L+ L+K AE+ P+
Sbjct: 251 LVLMDSALDGQFSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKE 310
Query: 322 MGIP---HGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGY-KDDEGIANELSFQMWT 377
IP + +TK+ + LTP GEAC R+DL+ +HE+LEK+GY +DD + NE SFQMWT
Sbjct: 311 ENIPTPSYTEPATKEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWT 370
Query: 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEA 437
Q+QE ++ KK GDAAFRAKDF TAIE YT F+ G +VSPTV ARRCLCYL+SDM +EA
Sbjct: 371 GQMQENMDYKKHGDAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREA 430
Query: 438 LGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483
L DAMQ QV SP++ A YLQAA L LGM +A+E L+ G++LEA
Sbjct: 431 LSDAMQTQVASPEFSIALYLQAACLLKLGMEAEAKEALRHGSSLEA 476
|
|
| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1554 (552.1 bits), Expect = 1.6e-159, P = 1.6e-159
Identities = 306/486 (62%), Positives = 371/486 (76%)
Query: 1 MGARCSKLSLCWWPSNLKSNLHESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVS 60
MG + SK+ C + + ENG + + FRE++L+QL+ ATS F +N+VS
Sbjct: 1 MGGQSSKIGTCCSHKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALENVVS 60
Query: 61 EHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC 120
EHGE APNVVY+G ++ IA+KRF+ +AWPD RQFLEEAR VG LRS+R+ NL+G CC
Sbjct: 61 EHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLGYCC 120
Query: 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLN 180
EG ERLLVAEFMPNETL+KHLFHW+ +PMKWAMR+RVALY+++AL+YCS+ G LYHDLN
Sbjct: 121 EGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYHDLN 180
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 240
YR+LFD++ NPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGR+ ESV+YSFGTLLL
Sbjct: 181 AYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGTLLL 240
Query: 241 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 300
DLL+GKHIPPSHALDLIR +N L DSCLEG FS+ DGTELVRL S CLQYE RERPN
Sbjct: 241 DLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARERPNI 300
Query: 301 KSLVASLTPLQKEAEVPSYTLMGIPH-GTASTKQTITLTPLGEACSRLDLTAIHEILEKV 359
KSLV +L LQK+ EV S+ LMG+P GT ++ + P EACS DLT++ EILEK+
Sbjct: 301 KSLVTALISLQKDTEVLSHVLMGLPQSGTFASPPS----PFAEACSGKDLTSMVEILEKI 356
Query: 360 GYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT 419
GYKDDE +LSF MWT+Q+QE +NSKK+GD AFR KDF AIE YT F+D G M+S T
Sbjct: 357 GYKDDE----DLSF-MWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLG-MISAT 410
Query: 420 VFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGT 479
V RR YL+S+M +EAL DAM+AQ ISP W A YLQ+AAL LGM ++Q L +G+
Sbjct: 411 VLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTEGS 470
Query: 480 NLEAKK 485
LEA+K
Sbjct: 471 ILEARK 476
|
|
| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1514 (538.0 bits), Expect = 2.7e-155, P = 2.7e-155
Identities = 282/454 (62%), Positives = 360/454 (79%)
Query: 35 LPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS 94
+ F+EF L++LR AT+GF IVSE GEKAPNVVY+G ++ + +A+KRF+R +WPD+
Sbjct: 35 IQNFKEFELNELRKATNGFSPSCIVSEGGEKAPNVVYRGKLEGNHLVAIKRFSRQSWPDA 94
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
+QF+ EA VG LR++R+V+LIGCC EG+ERLLVAE+MPN+TLSKHLFHWE QP+ W MR
Sbjct: 95 QQFVVEATGVGKLRNKRIVSLIGCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDMR 154
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214
VR+A Y+A+ALDYC+ + R +YHDLN YRILFD++G+PRLS FGLMKNSRDGKSYSTNLA
Sbjct: 155 VRIADYIAEALDYCNIENRKIYHDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNLA 214
Query: 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274
+TPPE+LRTGRVIPESV++S+GT+LLDLLSGKHIPPSHALD+IRGKN L+LMDS LEG +
Sbjct: 215 YTPPEFLRTGRVIPESVIFSYGTILLDLLSGKHIPPSHALDIIRGKNALLLMDSSLEGQY 274
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQT 334
+NDD T+LV LAS+CLQ E ++RP+ K L++++ PLQK+ EV S+ LMG+P T T
Sbjct: 275 ANDDATKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQKQEEVASHVLMGLPKNTVILP-T 333
Query: 335 ITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAF 394
+ L+PLG+AC+++DL H+IL K GY+D+EG NELSFQ WT Q+QE LN+KK GD AF
Sbjct: 334 M-LSPLGKACAKMDLATFHDILLKTGYRDEEGAENELSFQEWTQQVQEMLNTKKFGDIAF 392
Query: 395 RAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTA 454
R KDF +IE Y+ + + S TVFARR YL++D + AL DAMQAQV P+WPTA
Sbjct: 393 RDKDFKNSIEYYSKLVGMMPVPSATVFARRAFSYLMTDQQELALRDAMQAQVCIPEWPTA 452
Query: 455 FYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 488
FYLQA AL LGM DAQ+ L DG +AK+ +
Sbjct: 453 FYLQALALSKLGMETDAQDMLNDGAAYDAKRQNS 486
|
|
| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1499 (532.7 bits), Expect = 1.1e-153, P = 1.1e-153
Identities = 283/454 (62%), Positives = 350/454 (77%)
Query: 38 FREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQF 97
FREF+L+QLR AT GF A NIVSEH + PN+VYKG + + R IAVKRF R +WPD +F
Sbjct: 45 FREFSLEQLRIATDGFSAGNIVSEHNDSVPNIVYKGKLGDGRRIAVKRFQRLSWPDPFEF 104
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRV 157
+ EA+AVG LRSE + NLIGCCC+ ERLLVAE+MPN TL+KHLFHWE +PMKW MR++V
Sbjct: 105 INEAQAVGRLRSEHMANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLKV 164
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
AL+ A+AL+YC+ KG LYHDLN YRI+FD+ G P+LSCFGLMKNS +GK YSTNLAF P
Sbjct: 165 ALHTARALEYCNDKGIDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNLAFAP 224
Query: 218 PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277
PEYLR G VI ESV +SFGTLLLDL+SG+HIPP+HALDL RGKN+L+LMDS L+G FS++
Sbjct: 225 PEYLRLGTVIAESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSDE 284
Query: 278 DGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV-P-------SYTLMGIPHGTA 329
D TEL+ +ASRC + EP ERP+ K L A+L+ LQK A++ P S +P T
Sbjct: 285 DRTELIHVASRCFKTEPEERPSIKFLKATLSRLQKRAKLCPINVKRPMSPPSKNLPEKTK 344
Query: 330 STKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKR 389
+++ LTP G+ACSR DL++IHE+LEK+GY++D G+ NE SFQMWT ++QE ++ KK
Sbjct: 345 PATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFSFQMWTGEMQENMDYKKH 404
Query: 390 GDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISP 449
GDAAF AKDF TAIE YT F+ G VSPTV ARRCLCYL+++M EAL DAMQAQV SP
Sbjct: 405 GDAAFLAKDFDTAIEFYTEFMTGAPTVSPTVLARRCLCYLMTEMFSEALSDAMQAQVASP 464
Query: 450 DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483
+WP YLQAA LF L M +A+E L+ G+ LEA
Sbjct: 465 EWPIPLYLQAACLFKLEMEAEAKEALRHGSALEA 498
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FHD7 | Y5126_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7034 | 0.9877 | 0.9897 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 488 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 6e-30 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-23 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-23 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 4e-22 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 3e-21 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-19 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 4e-17 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 2e-14 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 3e-14 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-13 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 5e-13 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-12 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-12 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-12 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 9e-11 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-10 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 4e-10 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 9e-10 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 1e-09 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-09 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 1e-09 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 2e-09 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 3e-09 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 4e-09 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-09 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 5e-09 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 9e-09 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 1e-08 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 1e-08 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-08 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-08 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 2e-08 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 3e-08 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 4e-08 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 5e-08 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 5e-08 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 5e-08 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 5e-08 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 5e-08 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 7e-08 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 7e-08 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 1e-07 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 1e-07 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-07 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 2e-07 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 2e-07 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-07 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 3e-07 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 4e-07 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 5e-07 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 7e-07 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 7e-07 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 8e-07 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 9e-07 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-06 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 1e-06 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 2e-06 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 2e-06 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 2e-06 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 2e-06 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 3e-06 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 3e-06 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 3e-06 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-06 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 5e-06 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 6e-06 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 6e-06 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 2e-05 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-05 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-05 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 2e-05 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 2e-05 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 3e-05 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 3e-05 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 3e-05 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 5e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 6e-05 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 6e-05 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 9e-05 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 1e-04 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 1e-04 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-04 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 1e-04 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 1e-04 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 2e-04 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 2e-04 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 2e-04 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 3e-04 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 4e-04 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 4e-04 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 4e-04 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 4e-04 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 4e-04 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 5e-04 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 6e-04 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 7e-04 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 8e-04 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 9e-04 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 0.001 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 0.001 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 0.001 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 0.001 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 0.001 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 0.001 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 0.001 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 0.002 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 0.002 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 0.002 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 0.002 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 0.003 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 0.003 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 0.004 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 0.004 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 0.004 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 6e-30
Identities = 58/248 (23%), Positives = 88/248 (35%), Gaps = 49/248 (19%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERL 126
VY + +A+K + + L E + L +V L G +
Sbjct: 8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRIL 185
LV E+ +L L E + +R+ L + + L+Y S G + H DL IL
Sbjct: 68 LVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENIL 124
Query: 186 FDQD-GNPRLSCFGLMKNSRDGKSYST----NLAFTPPEYLRTGRVIPESV-VYSFGTLL 239
D D G +L+ FGL K KS A+ PE L E ++S G +L
Sbjct: 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184
Query: 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+L DLIR + LQ +P +RP+
Sbjct: 185 YEL--------PELKDLIR-----------------------------KMLQKDPEKRPS 207
Query: 300 AKSLVASL 307
AK ++ L
Sbjct: 208 AKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 1e-23
Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 16/249 (6%)
Query: 69 VVYKG-LVDEDRWIAVKRFNRS--AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125
VYK + +AVK + + E R + L +V LI + +
Sbjct: 14 TVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHL 73
Query: 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRI 184
LV E+ L +L P+ ++AL + + L+Y S G + H DL I
Sbjct: 74 YLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHSNG--IIHRDLKPENI 129
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV-VYSFGTLL 239
L D++G +++ FGL K S T TP PE L G V V+S G +L
Sbjct: 130 LLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVIL 189
Query: 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD--GTELVRLASRCLQYEPRER 297
+LL+GK P S L + + ++ LE E L +CL +P +R
Sbjct: 190 YELLTGKP-PFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKR 248
Query: 298 PNAKSLVAS 306
P A+ ++
Sbjct: 249 PTAEEILQH 257
|
Length = 260 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 99.5 bits (249), Expect = 1e-23
Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 28/256 (10%)
Query: 69 VVYKG-----LVDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEG 122
VYKG ++ +AVK A + FL EAR + L +V L+G C E
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73
Query: 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNT 181
E ++V E+MP L +L + + + + AL +A+ ++Y SK H DL
Sbjct: 74 EPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAA 131
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFG 236
L ++ ++S FGL ++ D Y + PE L+ G+ +S V+SFG
Sbjct: 132 RNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFG 191
Query: 237 TLLLDLLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291
LL ++ + G+ + + L+ ++ L +C EL +L +C
Sbjct: 192 VLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPP---------ELYKLMLQCWA 242
Query: 292 YEPRERPNAKSLVASL 307
+P +RP LV L
Sbjct: 243 EDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 95.3 bits (238), Expect = 4e-22
Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 31/257 (12%)
Query: 69 VVYKG-----LVDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEG 122
VYKG + +AVK A + FL EAR + L +V L+G C E
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEE 73
Query: 123 EERLLVAEFMPNETLSKHLFHWENQP-MKWAMRVRVALYLAQALDYCSSKGRALYH-DLN 180
E +V E+M L +L +N+P + + + AL +A+ ++Y SK H DL
Sbjct: 74 EPLYIVMEYMEGGDLLSYLR--KNRPKLSLSDLLSFALQIARGMEYLESKN--FIHRDLA 129
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSF 235
L ++ ++S FGL ++ D Y + PE L+ G+ +S V+SF
Sbjct: 130 ARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSF 189
Query: 236 GTLLLDLLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290
G LL ++ + G+ + L+ ++ L +C EL L +C
Sbjct: 190 GVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPP---------ELYDLMLQCW 240
Query: 291 QYEPRERPNAKSLVASL 307
+P +RP LV L
Sbjct: 241 AEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 93.0 bits (232), Expect = 3e-21
Identities = 70/257 (27%), Positives = 111/257 (43%), Gaps = 30/257 (11%)
Query: 69 VVYKGLVDEDRW-----IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEG 122
VYKG + D +AVK A + R+ FLEEA + L +V L+G C +G
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73
Query: 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNT 181
E +V E+MP L L + + +++AL +A+ ++Y SK H DL
Sbjct: 74 EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLESKN--FVHRDLAA 130
Query: 182 YRILFDQDGNPRLSCFGLMKN-SRDGKSYSTNLAFTP-----PEYLRTGRVIPESVVYSF 235
L ++ ++S FGL ++ D P PE L+ G+ +S V+SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190
Query: 236 GTLLLDLLSG-----KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290
G LL ++ + + L+L+ L ++C + EL L +C
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENCPD---------ELYELMLQCW 241
Query: 291 QYEPRERPNAKSLVASL 307
Y+P +RP LV L
Sbjct: 242 AYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 87.2 bits (217), Expect = 2e-19
Identities = 70/263 (26%), Positives = 110/263 (41%), Gaps = 33/263 (12%)
Query: 69 VVYKG----LVDEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLIGCCCEGE 123
VYKG + +AVK A + R FL+EAR + L +V L+G C E E
Sbjct: 10 EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69
Query: 124 ERLLVAEFMPNETLSKHL-------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
LV E+M L +L E + + A+ +A+ ++Y +SK + ++
Sbjct: 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVH 128
Query: 177 HDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPES 230
DL L +D ++S FGL ++ D Y + + PE L+ G +S
Sbjct: 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKS 188
Query: 231 VVYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285
V+SFG LL ++ + G + L+ +R L + C + EL L
Sbjct: 189 DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD---------ELYEL 239
Query: 286 ASRCLQYEPRERPNAKSLVASLT 308
C Q +P +RP LV L
Sbjct: 240 MLSCWQLDPEDRPTFSELVERLE 262
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 4e-17
Identities = 55/250 (22%), Positives = 90/250 (36%), Gaps = 26/250 (10%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRS-AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126
VY + +A+K + D + L E + + L+ +V L + ++
Sbjct: 14 KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL---NTYR 183
LV E+ L L A + AL+Y SKG ++ DL N
Sbjct: 74 LVMEYCEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYLHSKGI-VHRDLKPEN--- 127
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVIPESVVYSFGTLLL 240
IL D+DG+ +L+ FGL + G+ +T + PE L ++S G +L
Sbjct: 128 ILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILY 187
Query: 241 DLLSGK-----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+LL+GK I E S E L + L +P
Sbjct: 188 ELLTGKPPFPGDDQLLELFKKIGKPKPPFPPP---EWDISP----EAKDLIRKLLVKDPE 240
Query: 296 ERPNAKSLVA 305
+R A+ +
Sbjct: 241 KRLTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 2e-14
Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 25/252 (9%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
VYKG++ + +AVK + PD ++ FL+EA + +V LIG C + + +V
Sbjct: 11 VYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIV 70
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E +P +L L +N+ + ++++L A ++Y SK ++ DL L +
Sbjct: 71 MELVPGGSLLTFLRKKKNR-LTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGE 128
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ ++S FG M +G Y+ + + +T PE L GR ES V+S+G LL +
Sbjct: 129 NNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWE 187
Query: 242 LLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 296
S P + I + C E E+ RL +C Y+P
Sbjct: 188 TFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPE---------EIYRLMLQCWAYDPEN 238
Query: 297 RPNAKSLVASLT 308
RP+ + L
Sbjct: 239 RPSFSEIYNELQ 250
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 3e-14
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 28/253 (11%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRS---ERLVNLIGCCCEGEER--LLVAEFMPNE 135
+AVK N S R E R + +LR+ E +V G C + R L+ E++P+
Sbjct: 36 VAVKSLNHSGEEQHRSDFE--REIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSG 93
Query: 136 TLSKHL-FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194
+L +L H + +K + + + + +DY S+ R ++ DL IL + + ++
Sbjct: 94 SLRDYLQRHRDQINLK--RLLLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESEDLVKI 150
Query: 195 SCFGLMK--NSRDGKSYSTNLAFTP-----PEYLRTGRVIPESVVYSFGTLLLDLLS-GK 246
S FGL K Y +P PE LRT + S V+SFG L +L + G
Sbjct: 151 SDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD 210
Query: 247 H--IPPSHALDLIRGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRER 297
PP+ L +I M++ LE E+ L C + EP++R
Sbjct: 211 PSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDR 270
Query: 298 PNAKSLVASLTPL 310
P+ L+ + L
Sbjct: 271 PSFADLILIVDRL 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 2e-13
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 23/231 (9%)
Query: 81 IAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139
+AVK + PD + +FL+EAR + +V LIG C + + +V E +
Sbjct: 23 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 82
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
L E +K +++ A ++Y SK ++ DL L + ++S FG+
Sbjct: 83 FL-RTEGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGM 140
Query: 200 MKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP---- 249
+ DG ST + +T PE L GR ES V+SFG LL + S +P
Sbjct: 141 SREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANL 200
Query: 250 -PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ I L + C + + RL RC +Y+P +RP+
Sbjct: 201 SNQQTREAIEQGVRLPCPELCPD---------AVYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 5e-13
Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 16/244 (6%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129
V G + +AVK + ++ FL EA + LR LV L+G +G +V
Sbjct: 22 VMLGDY-RGQKVAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79
Query: 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189
E+M +L +L + A ++ AL + + ++Y K ++ DL +L +D
Sbjct: 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSED 138
Query: 190 GNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI 248
++S FGL K + G S + +T PE LR + +S V+SFG LL ++ S +
Sbjct: 139 LVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 249 P-PSHAL-DLIRG--KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
P P L D++ K + M EG E+ ++ C + +P +RP K L
Sbjct: 199 PYPRIPLKDVVPHVEKGYRM---EAPEGC-----PPEVYKVMKDCWELDPAKRPTFKQLR 250
Query: 305 ASLT 308
L
Sbjct: 251 EQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 1e-12
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 94 SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAM 153
++ FLEE + L + LV L+G +V E M L L +
Sbjct: 43 AQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQ 101
Query: 154 RVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTN 212
++ +L +A+ ++Y SK + ++ DL IL +DG ++S FGL + S +
Sbjct: 102 LLQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP 160
Query: 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLE 271
+ +T PE L+ + +S V+S+G LL ++ S G+ P +L ++ C+E
Sbjct: 161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK---------ECVE 211
Query: 272 GHFSNDDGTE----LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
+ + + L + C + EP++RP+ L L+KE
Sbjct: 212 KGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK---LEKE 254
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 2e-12
Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 22/250 (8%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+KG + + +AVK + + +FL EAR + +V LIG C + + +V
Sbjct: 11 VFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIV 70
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E +P L +++ +K V+ AL A + Y SK ++ DL L +
Sbjct: 71 MELVPGGDFLSFLRKKKDE-LKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGE 128
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
+ ++S FG+ + DG S+ L +T PE L GR ES V+S+G LL +
Sbjct: 129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188
Query: 244 SGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298
S P A + + + C + ++ ++ RC Y+P RP
Sbjct: 189 SLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPD---------DVYKVMQRCWDYKPENRP 239
Query: 299 NAKSLVASLT 308
L L
Sbjct: 240 KFSELQKELA 249
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 68.2 bits (165), Expect = 2e-12
Identities = 72/366 (19%), Positives = 126/366 (34%), Gaps = 35/366 (9%)
Query: 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS---RQFLEEARAVGLLRSE-RL 112
I+ + GE + VY + + +A+K + S +FL E + + L +
Sbjct: 3 RILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60
Query: 113 VNLIGCCCEGEERLLVAEFMPNETLSKHL-FHWENQPMKWAMRVRVALYLAQALDYCSSK 171
V L + LV E++ +L L P+ + + + + AL+Y SK
Sbjct: 61 VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120
Query: 172 GRALYHDLNTYRILFDQDGNPRLSC-FGLMKNSRDGKSYSTN----------LAFTPPEY 220
G ++ D+ IL D+DG FGL K D S S+ + PE
Sbjct: 121 G-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV 179
Query: 221 LR---TGRVIPESVVYSFGTLLLDLLSGKH--------IPPSHALDLIRGKNFLMLMDSC 269
L S ++S G L +LL+G S L +I + + S
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL-ELPTPSLASP 238
Query: 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTA 329
L L + L +P+ R ++ S ++ L ++ L +
Sbjct: 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH--DLLAHLKLKESDLSDLLKPDD 296
Query: 330 STKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKR 389
S ++L P EA I DD + EL+ + + +
Sbjct: 297 SAPLRLSLPPSLEALIS--SLNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLS 354
Query: 390 GDAAFR 395
++ R
Sbjct: 355 TASSKR 360
|
Length = 384 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 9e-11
Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 24/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETL 137
+AVK R + + +E + L E +V GCC E + L+ E++P +L
Sbjct: 36 VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95
Query: 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
+L + A + A + + + Y S+ ++ DL +L D D ++ F
Sbjct: 96 RDYL---PKHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDF 151
Query: 198 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKH 247
GL K +G Y + + + E L+ + S V+SFG L +LL+ K
Sbjct: 152 GLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211
Query: 248 IPPSHALDLIRGKNFLM-------LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 300
PP ++I K M L++ + + E+ L C + E + RP
Sbjct: 212 SPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF 271
Query: 301 KSLVASL 307
+SL+ L
Sbjct: 272 RSLIPIL 278
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 1e-10
Identities = 54/245 (22%), Positives = 92/245 (37%), Gaps = 21/245 (8%)
Query: 69 VVYKGLVDEDRW-IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
VYK +A+K + + + E + + + +V G + +E +
Sbjct: 15 EVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
V EF +L L NQ + + V L + L+Y S G ++ D+ IL
Sbjct: 75 VMEFCSGGSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNGI-IHRDIKAANILLT 132
Query: 188 QDGNPRLSCFGL---MKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
DG +L FGL + +++ + + PE + ++ ++S G ++L
Sbjct: 133 SDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAE 192
Query: 245 GKHIPPSH------ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298
GK PP AL I L +D E +CLQ P +RP
Sbjct: 193 GK--PPYSELPPMKALFKIATNGPPGL----RNPEKWSD---EFKDFLKKCLQKNPEKRP 243
Query: 299 NAKSL 303
A+ L
Sbjct: 244 TAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 4e-10
Identities = 67/289 (23%), Positives = 119/289 (41%), Gaps = 40/289 (13%)
Query: 57 NIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRS 109
++ E G+ + +VY+G + + +AVK N SA R +FL EA +
Sbjct: 9 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 68
Query: 110 ERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVR----VALYL 161
+V L+G +G+ L+V E M + L +L EN P + ++ +A +
Sbjct: 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128
Query: 162 AQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN------SRDGKSYSTNLAF 215
A + Y ++K + ++ DL + D ++ FG+ ++ R G + +
Sbjct: 129 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187
Query: 216 TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCL 270
PE L+ G S ++SFG +L ++ S P L + +L D+C
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 247
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSY 319
E + L C Q+ P+ RP +V L K+ PS+
Sbjct: 248 E---------RVTDLMRMCWQFNPKMRPTFLEIVNLL----KDDLHPSF 283
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 9e-10
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 35/260 (13%)
Query: 63 GEKAPNVVYKGLVDED-RWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCC 119
G+ + VV+K + D R A+K+ + S + + ++EAR + L S ++
Sbjct: 9 GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF 68
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMK----WAMRVRVALYLAQALDYCSSKGRAL 175
+ + +V E+ N L K L +P+ W +++ L L + SK + L
Sbjct: 69 LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILL----GLAHLHSK-KIL 123
Query: 176 YHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV 231
+ D+ + + D N ++ G+ K D +++ + TP PE +S
Sbjct: 124 HRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSD 183
Query: 232 VYSFGTLLLDLLSGKHIPPSHA-------LDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284
V++ G +L + +GKH P A L +IRG + +S L +
Sbjct: 184 VWALGVVLYECCTGKH--PFDANNQGALILKIIRGVF------PPVSQMYSQQ----LAQ 231
Query: 285 LASRCLQYEPRERPNAKSLV 304
L +CL + R+RP+ L+
Sbjct: 232 LIDQCLTKDYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 1e-09
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 18/201 (8%)
Query: 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGC 118
V E G +V+ G E R +A+K R F+EEA+ + L +LV L G
Sbjct: 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYGV 67
Query: 119 CCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS-----SKGR 173
C E LV EFM + LS +L Q K++ L LD C
Sbjct: 68 CTERSPICLVFEFMEHGCLSDYL---RAQRGKFSQET----LLGMCLDVCEGMAYLESSN 120
Query: 174 ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIP 228
++ DL L ++ ++S FG+ + D + S+ + ++ PE +
Sbjct: 121 VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSS 180
Query: 229 ESVVYSFGTLLLDLLSGKHIP 249
+S V+SFG L+ ++ S P
Sbjct: 181 KSDVWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 1e-09
Identities = 54/253 (21%), Positives = 95/253 (37%), Gaps = 33/253 (13%)
Query: 70 VYKGLVDED-RWIAVK--RFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER- 125
VY L + +AVK + + + E R + L+ +V G + E+
Sbjct: 16 VYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNT 75
Query: 126 -LLVAEFMPNETLSKHL--FHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYH-D 178
+ E++ +LS L F +P+ + Y Q L Y S G H D
Sbjct: 76 LNIFLEYVSGGSLSSLLKKFGKLPEPV-------IRKYTRQILEGLAYLHSNGIV--HRD 126
Query: 179 LNTYRILFDQDGNPRLSCFGLMK--NSRDGKSYSTNLAFTP----PEYLRTGRVIPESVV 232
+ IL D DG +L+ FG K + + ++ TP PE +R + +
Sbjct: 127 IKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADI 186
Query: 233 YSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FSNDDGTELVRLASRCL 290
+S G ++++ +GK P S + + + E +CL
Sbjct: 187 WSLGCTVIEMATGKP-PWSELGNPMA----ALYKIGSSGEPPEIPEHLSEEAKDFLRKCL 241
Query: 291 QYEPRERPNAKSL 303
+ +P++RP A L
Sbjct: 242 RRDPKKRPTADEL 254
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 1e-09
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 39/225 (17%)
Query: 55 ADNIV--SEHGEKAPNVVYKG-----LVDEDRWI-AVKRFNRSAWPDSRQ-FLEEARAVG 105
D IV E GE A V+ G + D+ + AVK +A D+R+ F EA +
Sbjct: 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLT 63
Query: 106 LLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL---------FHWENQPMKWAMR-- 154
+ E +V G C EG+ ++V E+M + L+K L + PM
Sbjct: 64 NFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQ 123
Query: 155 -VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN- 212
+++A+ +A + Y +S+ ++ DL T L D ++ FG+ SRD Y+T+
Sbjct: 124 LLQIAVQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDY 177
Query: 213 ----------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GK 246
+ + PPE + + ES V+SFG +L ++ + GK
Sbjct: 178 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 63/283 (22%), Positives = 121/283 (42%), Gaps = 46/283 (16%)
Query: 58 IVSEHGEKAPNVVYKGLV------DEDRWIAVKRFN-RSAWPDSRQFLEEARAVGLLRSE 110
++ E G+ + +VY+GL + + +A+K N ++ + +FL EA +
Sbjct: 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCH 69
Query: 111 RLVNLIGCCCEGEERLLVAEFMPNETLSKHL-------FHWENQPMKWAMR-VRVALYLA 162
+V L+G G+ L+V E M L +L + + +++A +A
Sbjct: 70 HVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIA 129
Query: 163 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN---------- 212
+ Y ++K + ++ DL + +D ++ FG+ +RD Y T+
Sbjct: 130 DGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYRKGGKGLL 183
Query: 213 -LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP---PSH--ALDLIRGKNFLMLM 266
+ + PE L+ G +S V+SFG +L ++ + P S+ L + L L
Sbjct: 184 PVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLP 243
Query: 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
++C + +L+ L C QY P+ RP +V+SL
Sbjct: 244 ENCPD---------KLLELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 3e-09
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 19/243 (7%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129
V++GL +A+K + F +E +A+ LR + L++L C GE ++
Sbjct: 22 VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81
Query: 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189
E M +L L E Q + A + +A +A+ + Y + +++ DL IL +D
Sbjct: 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGED 140
Query: 190 GNPRLSCFGLMKNSRDG--KSYSTNLAF--TPPEYLRTGRVIPESVVYSFGTLLLDLLSG 245
+++ FGL + ++ S + + T PE G +S V+SFG LL ++ +
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200
Query: 246 KHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 300
+P D I + C + E+ ++ C EP +RP+
Sbjct: 201 GQVPYPGMNNHEVYDQITAGYRMPCPAKCPQ---------EIYKIMLECWAAEPEDRPSF 251
Query: 301 KSL 303
K+L
Sbjct: 252 KAL 254
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 57.4 bits (138), Expect = 4e-09
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 13 ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMK----WAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L EN P++ +++A +A +
Sbjct: 73 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN------SRDGKSYSTNLAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ R G + + PE
Sbjct: 133 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 191
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C + F
Sbjct: 192 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLF 251
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
EL+R+ C QY P+ RP+ +++S+
Sbjct: 252 ------ELMRM---CWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 4e-09
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 34/224 (15%)
Query: 105 GLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQA 164
G L+ +V LIG C + L+ E++ + LS+ L + + W R ++A+ +A+A
Sbjct: 738 GKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAKA 792
Query: 165 LDY--CSSKGRALYHDLNTYRILFDQDGNPRLSCFGL-----MKNSRDGKSYSTNLAFTP 217
L + C + +L+ +I+ D P L L S A+
Sbjct: 793 LRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-RLSLPGLLCTDTKCFISS-----AYVA 846
Query: 218 PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------------NFLML 265
PE T + +S +Y FG +L++LL+GK P+ A + G + M
Sbjct: 847 PETRETKDITEKSDIYGFGLILIELLTGKS--PADAEFGVHGSIVEWARYCYSDCHLDMW 904
Query: 266 MDSCLEGHFS--NDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
+D + G S ++ E++ LA C +P RP A ++ +L
Sbjct: 905 IDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 5e-09
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 35/232 (15%)
Query: 94 SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ-PMKWA 152
S F E A + L + LV G C G+E ++V E++ +L +L +N + W
Sbjct: 43 SESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW- 101
Query: 153 MRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 211
++ VA LA AL + KG L H ++ +L ++ + + +K S G S +
Sbjct: 102 -KLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158
Query: 212 --------NLAFTPPEYLRTGRVIP-ESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF 262
+ + PPE + + + + +SFGT L ++ SG P
Sbjct: 159 LPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP------------- 205
Query: 263 LMLMDSCLEGHFSND-------DGTELVRLASRCLQYEPRERPNAKSLVASL 307
L +DS + F D TEL L ++C+ YEP RP+ ++++ L
Sbjct: 206 LSALDSQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 9e-09
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 11/187 (5%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129
V++GL + +AVK + D + FL EA+ + LR +L+ L C E +V
Sbjct: 22 VWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80
Query: 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189
E M +L ++L + +K + +A +A + Y ++ ++ DL +L ++
Sbjct: 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGEN 139
Query: 190 GNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242
+++ FGL + +R+G + + +T PE R +S V+SFG LL ++
Sbjct: 140 NICKVADFGLARVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEI 197
Query: 243 LSGKHIP 249
++ +P
Sbjct: 198 VTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 29/252 (11%)
Query: 73 GLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
G+V +W +A+K A + F+EEA+ + L LV L G C + +
Sbjct: 18 GVVHLGKWRGKIDVAIKMIREGAMSED-DFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFI 76
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
V E+M N L +L + + + + + + +A++Y S G ++ DL L
Sbjct: 77 VTEYMANGCLLNYLRERKGK-LGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVG 134
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242
+D ++S FGL + D + S+ + + PPE R +S V+SFG L+ ++
Sbjct: 135 EDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEV 194
Query: 243 LSGKHIPPSHALDLIRGKNFLMLMDSCLEG------HFSNDDGTELVRLASRCLQYEPRE 296
S +P + +++S G + TE+ + C +P +
Sbjct: 195 FSEGKMP-------YERFSNSEVVESVSAGYRLYRPKLAP---TEVYTIMYSCWHEKPED 244
Query: 297 RPNAKSLVASLT 308
RP K L++ LT
Sbjct: 245 RPAFKKLLSQLT 256
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 1e-08
Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 30/243 (12%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +A+K + S P++ FL EA + L+ RLV L + E ++
Sbjct: 22 VWMGYYNGHTKVAIKSLKQGSMSPEA--FLAEANLMKQLQHPRLVRLYAVVTQ-EPIYII 78
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L E + + +A +A+ + + K ++ DL IL +
Sbjct: 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSE 137
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 138 TLCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 195
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG + D+C E EL L C + +P
Sbjct: 196 IVTYGRIPYPGMTNPEVIQNLERGYR-MPRPDNCPE---------ELYELMRLCWKEKPE 245
Query: 296 ERP 298
ERP
Sbjct: 246 ERP 248
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 55.2 bits (134), Expect = 1e-08
Identities = 59/197 (29%), Positives = 85/197 (43%), Gaps = 27/197 (13%)
Query: 112 LVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDY 167
+V L + EE+L LV E+ P L HL + A Y A+ AL+Y
Sbjct: 55 IVKLH-YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERA-----RFYAAEIVLALEY 108
Query: 168 CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRT 223
S G +Y DL IL D DG+ +L+ FGL K S + TP PE L
Sbjct: 109 LHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLL- 166
Query: 224 GRVIPESV-VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGT 280
G+ ++V +S G LL ++L+GK PP ++ + + L+ F
Sbjct: 167 GKGYGKAVDWWSLGVLLYEMLTGK--PP------FYAEDRKEIYEKILKDPLRFPEFLSP 218
Query: 281 ELVRLASRCLQYEPRER 297
E L S LQ +P +R
Sbjct: 219 EARDLISGLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 2e-08
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 38/216 (17%)
Query: 61 EHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLV 113
E GE A VYKG + +A+K +A P +Q F +EA + L+ +V
Sbjct: 12 ELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIV 71
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHL----------FHWENQPMKWAMR----VRVAL 159
L+G C + + ++ E++ + L + L ++ +K ++ + +A+
Sbjct: 72 CLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI 131
Query: 160 YLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------- 212
+A ++Y SS ++ DL L + ++S FGL SRD YS +
Sbjct: 132 QIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTVKISDFGL---SRDI--YSADYYRVQSK 185
Query: 213 ----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+ + PPE + G+ ES ++SFG +L ++ S
Sbjct: 186 SLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 2e-08
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSK 139
+AVK A ++ FL EA + LR LV L+G E + L +V E+M +L
Sbjct: 32 VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 89
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
+L + ++ +L + +A++Y + ++ DL +L +D ++S FGL
Sbjct: 90 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGL 148
Query: 200 MKNSRDGKSYST-NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
K + + + +T PE LR + +S V+SFG LL ++ S +P
Sbjct: 149 TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 3e-08
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 24/249 (9%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + + +AVK P+S FLEEA+ + LR ++LV L E E +V
Sbjct: 22 VWMGTWNGNTKVAVKTLKPGTMSPES--FLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIV 78
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M +L L E + +K V +A +A + Y + ++ DL + IL
Sbjct: 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE-RMNYIHRDLRSANILVGD 137
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+++ FGL + +R G + + +T PE GR +S V+SFG LL +
Sbjct: 138 GLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195
Query: 242 LLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH---FSNDDGTELVRLASRCLQYEPRERP 298
L++ +P G N +++ G+ D L L +C + +P ERP
Sbjct: 196 LVTKGRVP-------YPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERP 248
Query: 299 NAKSLVASL 307
+ L + L
Sbjct: 249 TFEYLQSFL 257
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 4e-08
Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 42/263 (15%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK ++ + F EA + L+ E +V G C EG+ ++V E+M + L+K
Sbjct: 38 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 97
Query: 141 L--------FHWENQP---MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189
L E + + + +A +A + Y +S+ ++ DL T L ++
Sbjct: 98 LRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGEN 156
Query: 190 GNPRLSCFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVIPESVVYSFGTL 238
++ FG+ SRD YST+ + + PPE + + ES V+S G +
Sbjct: 157 LLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 211
Query: 239 LLDLLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293
L ++ + GK + + ++ I L +C + E+ L C Q E
Sbjct: 212 LWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPK---------EVYDLMLGCWQRE 262
Query: 294 PRERPNAKSLVASLTPLQKEAEV 316
P R N K + + L L K + V
Sbjct: 263 PHMRLNIKEIHSLLQNLAKASPV 285
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 5e-08
Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 42/274 (15%)
Query: 63 GEKAPNVVYKGLVDEDRWI---AVKRF-----NRSAWPDSRQFLEEARAVGLLRSERLVN 114
GE V +G +++D I AVK RS D FL EA + ++
Sbjct: 8 GEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMED---FLSEAVCMKEFDHPNVMR 64
Query: 115 LIGCCCEGEER------LLVAEFMPNETLSKHLFHWE--NQP--MKWAMRVRVALYLAQA 164
LIG C + E +++ FM + L L + + P + M V+ +A
Sbjct: 65 LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124
Query: 165 LDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPP------ 218
++Y SSK ++ DL + +++ N ++ FGL K +G Y P
Sbjct: 125 MEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183
Query: 219 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGH 273
E L +S V+SFG + ++ + P S D +R N L CL+G
Sbjct: 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGL 243
Query: 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
+S L S C P++RP+ ++L L
Sbjct: 244 YS---------LMSSCWLLNPKDRPSFETLRCEL 268
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 5e-08
Identities = 43/159 (27%), Positives = 62/159 (38%), Gaps = 19/159 (11%)
Query: 156 RVALYLAQALDYC----SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 211
R+ L AL C L+ DL I D + N +L FGL K S++
Sbjct: 109 RILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAK 168
Query: 212 NLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
TP PE L +S ++S G L+ +L + PP A +N L L
Sbjct: 169 TYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTA------RNQLQLAS 220
Query: 268 SCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSL 303
EG F +EL + L +P +RP+ + L
Sbjct: 221 KIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 5e-08
Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 55/255 (21%)
Query: 81 IAVKRFNRSAWPDSRQ--FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+A+K ++ D ++ FL EA +G ++ L G + +++ E+M N +L
Sbjct: 35 VAIKTL-KAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLD 93
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
K L + + V + +A + Y S ++ DL IL + + ++S FG
Sbjct: 94 KFLRENDGK-FTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFG 151
Query: 199 LMKNSRDGKS-YSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-------- 244
L + D ++ Y+T + +T PE + + S V+SFG ++ +++S
Sbjct: 152 LSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWD 211
Query: 245 ------------GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292
G +PP MD C L +L C Q
Sbjct: 212 MSNQDVIKAVEDGYRLPPP--------------MD-CPSA---------LYQLMLDCWQK 247
Query: 293 EPRERPNAKSLVASL 307
+ ERP +V++L
Sbjct: 248 DRNERPTFSQIVSTL 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 5e-08
Identities = 58/275 (21%), Positives = 104/275 (37%), Gaps = 37/275 (13%)
Query: 63 GEKAPNVVYKGLVDEDRW----IAVK--RFNRSAWPDSRQFLEEARAVGLLRSERLVNLI 116
GE V +G + +D +AVK + + + + +FL EA + ++ LI
Sbjct: 8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67
Query: 117 GCCCEGEER------LLVAEFMPNETLSKHLFH--WENQPMKWA--MRVRVALYLAQALD 166
G C E +++ FM + L L + P K ++ + +A ++
Sbjct: 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127
Query: 167 YCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPP------EY 220
Y S++ ++ DL + +D ++ FGL K G Y P E
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186
Query: 221 LRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFS 275
L +S V++FG + ++ + P D +R N L + CL+
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLD---- 242
Query: 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
EL L C + +P++RP L L +
Sbjct: 243 -----ELYDLMYSCWRADPKDRPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 5e-08
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 48 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 106
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 107 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 165
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 166 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 223
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + EP ERP + L A L
Sbjct: 224 CPPECPE---------SLHDLMCQCWRKEPEERPTFEYLQAFL 257
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 7e-08
Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 37/255 (14%)
Query: 73 GLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
G+V +W +A+K + + +F+EEA+ + L E+LV L G C + +
Sbjct: 18 GVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYI 76
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
V E+M N L +L + + + + + + + Y SK + ++ DL L D
Sbjct: 77 VTEYMSNGCLLNYLREHGKRFQP-SQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVD 134
Query: 188 QDGNPRLSCFGLMKNSRDGKSYST-----NLAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242
G ++S FGL + D + S+ + ++PPE L + +S V++FG L+ ++
Sbjct: 135 DQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEV 194
Query: 243 LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR--LASR--------CLQY 292
S +P + +S S G L R LAS C
Sbjct: 195 YSLGKMP------------YERFNNSETVEKVSQ--GLRLYRPHLASEKVYAIMYSCWHE 240
Query: 293 EPRERPNAKSLVASL 307
+ ERP + L++S+
Sbjct: 241 KAEERPTFQQLLSSI 255
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 7e-08
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR ++LV L E E +V EFM +L L + + +K V
Sbjct: 48 FLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVD 106
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL + +++ FGL + +R G +
Sbjct: 107 MAAQIADGMAYIE-RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKF 165
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC 269
+ +T PE GR +S V+SFG LL +L++ +P ++ + L ++
Sbjct: 166 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN----REVLEQVERG 219
Query: 270 LEGHFSNDDGTELVRLASRCLQYEPRERP 298
L L C + +P ERP
Sbjct: 220 YRMPCPQGCPESLHELMKLCWKKDPDERP 248
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 23/255 (9%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
VY +E +AVK P R+ FL+EA + +V LIG E +V
Sbjct: 26 VYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E P L +L + + A + + L+ AL Y SK R ++ D+ +L
Sbjct: 85 MELAPLGELRSYLQVNKYS-LDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSS 142
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTNLAFTP-----PEYLRTGRVIPESVVYSFGTLLLDLL 243
+L FGL + D Y + P PE + R S V+ FG + ++L
Sbjct: 143 PDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 202
Query: 244 S-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298
G + + + I L + +C L L ++C Y+P +RP
Sbjct: 203 MLGVKPFQGVKNNDVIGRIENGERLPMPPNC---------PPTLYSLMTKCWAYDPSKRP 253
Query: 299 NAKSLVASLTPLQKE 313
L A L+ + +E
Sbjct: 254 RFTELKAQLSDILQE 268
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 1e-07
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 37/256 (14%)
Query: 73 GLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
G+V +W +A+K N A + F+EEA+ + L +LV L G C + + +
Sbjct: 18 GVVHLGKWRAQIKVAIKAINEGAMSEE-DFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYI 76
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
V EFM N L +L + + K M + + + + ++Y ++ DL L
Sbjct: 77 VTEFMENGCLLNYLRQRQGKLSK-DMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVS 134
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDL 242
G ++S FG+ + D + S++ A ++PPE + +S V+SFG L+ ++
Sbjct: 135 STGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEV 194
Query: 243 LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR--LAS--------RCLQY 292
+ +P K+ +++ G L R LAS C
Sbjct: 195 FTEGKMP-------FEKKSNYEVVEMISRGF-------RLYRPKLASMTVYEVMYSCWHE 240
Query: 293 EPRERPNAKSLVASLT 308
+P RP L+ ++T
Sbjct: 241 KPEGRPTFAELLRAIT 256
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 25/241 (10%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129
V+ G + +AVK + + FLEEA + L+ ++LV L + E ++
Sbjct: 22 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80
Query: 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189
E+M +L L E + + + +A+ + Y K ++ DL +L +
Sbjct: 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 139
Query: 190 GNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242
+++ FGL + +R+G + + +T PE + G +S V+SFG LL ++
Sbjct: 140 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEI 197
Query: 243 LSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
++ IP S + ++ + M++C + EL + C + + ER
Sbjct: 198 VTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPD---------ELYDIMKTCWKEKAEER 248
Query: 298 P 298
P
Sbjct: 249 P 249
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 57/266 (21%), Positives = 100/266 (37%), Gaps = 27/266 (10%)
Query: 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFL-EEARAVGLLRSERLVN 114
++ G A VVY + + + +A+KR + S L +E +A+ +V
Sbjct: 4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK 63
Query: 115 LIGCCCEGEERLLVAEFMPNETLS---KHLFHWENQPMKWAMRV-RVALYLAQALDYCSS 170
G+E LV ++ +L K + V + L + L+Y S
Sbjct: 64 YYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVL---KGLEYLHS 120
Query: 171 KGRALYHDLNTYRILFDQDGNPRLSCFG----LMKNSRDGKSYSTNLAFTP----PEYLR 222
G+ ++ D+ IL +DG+ +++ FG L + TP PE +
Sbjct: 121 NGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVME 179
Query: 223 TGRVIPESV-VYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277
++SFG ++L +G PP L L + L +S
Sbjct: 180 QVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSK- 238
Query: 278 DGTELVRLASRCLQYEPRERPNAKSL 303
++ S CLQ +P +RP A+ L
Sbjct: 239 ---SFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-07
Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 45/266 (16%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + F EA + L+ E +V G C +G+ ++V E+M + L+K
Sbjct: 38 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 97
Query: 141 L--------FHWENQPMK------WAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
L + QP + + + +A +A + Y +S+ ++ DL T L
Sbjct: 98 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLV 156
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVIPESVVYSF 235
G L G SRD YST+ + + PPE + + ES V+SF
Sbjct: 157 ---GANLLVKIGDFGMSRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211
Query: 236 GTLLLDLLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290
G +L ++ + GK + + ++ I L C + E+ + C
Sbjct: 212 GVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK---------EVYDIMLGCW 262
Query: 291 QYEPRERPNAKSLVASLTPLQKEAEV 316
Q EP++R N K + L L K +
Sbjct: 263 QREPQQRLNIKEIYKILHALGKATPI 288
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 3e-07
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR ++LV L C E E +V E+M +L L E + ++ V
Sbjct: 48 FLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVD 107
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A+ + Y S+ ++ DL IL ++ +++ FGL + +R+G +
Sbjct: 108 MAAQIAEGMAYLESR-NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKF 166
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
+ +T PE GR +S V+SFG LL ++++ +P
Sbjct: 167 P--IKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 50/259 (19%)
Query: 81 IAVKRFNRSAWPDSR--QFLEEARAVGLLRS---ERLVNLIGCCCEGEER--LLVAEFMP 133
+AVK S P+S + + + +LR+ E +V G C E L+ EF+P
Sbjct: 36 VAVK----SLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 91
Query: 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193
+ +L ++L +N+ + +++ A+ + + +DY S+ + ++ DL +L + + +
Sbjct: 92 SGSLKEYLPRNKNK-INLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVK 149
Query: 194 LSCFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG- 245
+ FGL K K Y T + + PE L + S V+SFG L +LL+
Sbjct: 150 IGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYC 209
Query: 246 -----------KHIPPSHA----LDLIR----GKNFLMLMDSCLEGHFSNDDGTELVRLA 286
K I P+H L+R GK L +C E E+ +L
Sbjct: 210 DSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKR-LPRPPNCPE---------EVYQLM 259
Query: 287 SRCLQYEPRERPNAKSLVA 305
+C +++P +R ++L+
Sbjct: 260 RKCWEFQPSKRTTFQNLIE 278
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 4e-07
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 27/266 (10%)
Query: 63 GEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
G+ A VY + + + +A+K+ N P + E + ++ +VN +
Sbjct: 28 GQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 87
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
G+E +V E++ +L+ + + A R L QALD+ S + ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALDFLHSN-QVIHRDIKS 143
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG+ +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV--RLASRCLQYEPR 295
+ ++++ G+ PP + +R L L+ + N + V +RCL+ +
Sbjct: 204 MAIEMVEGE--PPYLNENPLRA---LYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVD 258
Query: 296 ERPNAKSL-----------VASLTPL 310
R +AK L ++SLTPL
Sbjct: 259 RRGSAKELLQHPFLKLAKPLSSLTPL 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 5e-07
Identities = 66/282 (23%), Positives = 118/282 (41%), Gaps = 50/282 (17%)
Query: 61 EHGEKAPNVVYKG-----LVDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVN 114
E GE A V+ L ++D+ + + + A +RQ F EA + +L+ + +V
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71
Query: 115 LIGCCCEGEERLLVAEFMPNETLSKHL-FHWENQ------------PMKWAMRVRVALYL 161
G C EG L+V E+M + L++ L H + + + +A +
Sbjct: 72 FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131
Query: 162 AQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------- 212
A + Y +S ++ DL T L Q ++ FG+ SRD YST+
Sbjct: 132 ASGMVYLASL-HFVHRDLATRNCLVGQGLVVKIGDFGM---SRD--IYSTDYYRVGGRTM 185
Query: 213 --LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GK----HIPPSHALDLIRGKNFLML 265
+ + PPE + + ES ++SFG +L ++ + GK + + A++ I L
Sbjct: 186 LPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELER 245
Query: 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
+C E+ + C Q EP++R K + + L
Sbjct: 246 PRTC---------PPEVYAIMQGCWQREPQQRMVIKDIHSRL 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 7e-07
Identities = 58/265 (21%), Positives = 99/265 (37%), Gaps = 36/265 (13%)
Query: 70 VYKGLVDEDRW------IAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEG 122
VY+GL +AVK S D FL EA + + +V LIG E
Sbjct: 22 VYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81
Query: 123 EERLLVAEFMPNETLSKHLFHWEN---QPMKWAMR--VRVALYLAQALDYCSSKGRALYH 177
R ++ E M L L +P M+ + A +A+ Y ++
Sbjct: 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHR 140
Query: 178 DLNTYRILFDQDGNPR---LSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIP 228
D+ L G R ++ FG+ ++ Y + + PPE G
Sbjct: 141 DIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTS 200
Query: 229 ESVVYSFGTLLLDLLSGKHIP-PS----HALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283
++ V+SFG LL ++ S ++P P ++ + G L C +
Sbjct: 201 KTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGC---------PGPVY 251
Query: 284 RLASRCLQYEPRERPNAKSLVASLT 308
R+ + C Q+ P +RPN +++ +
Sbjct: 252 RIMTDCWQHTPEDRPNFATILERIQ 276
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 7e-07
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLL-VAEFMPNETLSKHLFHWENQPMKWAMRVR 156
+ E R + L R+ + + CC + +RL V EF+ L H+ Q + R
Sbjct: 43 MTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHI-----QKSRRFDEAR 97
Query: 157 VALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDGKSYSTN 212
Y A+ AL + KG +Y DL +L D +G+ +L+ FG+ K +GK+ ST
Sbjct: 98 ARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST- 155
Query: 213 LAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
TP PE L+ P ++ G LL ++L G H P
Sbjct: 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 8e-07
Identities = 55/246 (22%), Positives = 106/246 (43%), Gaps = 24/246 (9%)
Query: 70 VYKGLVDE-DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
VY+G+ + +AVK +FL+EA + ++ LV L+G C ++
Sbjct: 22 VYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 80
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
EFM L +L Q + + + +A ++ A++Y K ++ DL L +
Sbjct: 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGE 139
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242
+ +++ FGL + G +Y+ + + +T PE L + +S V++FG LL ++
Sbjct: 140 NHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 198
Query: 243 LSGKHIP-PSHALDLIRGKNFLMLMDSCLEGHFSND--DG--TELVRLASRCLQYEPRER 297
+ P P L + LE + + +G ++ L C Q+ P +R
Sbjct: 199 ATYGMSPYPGIDLSQVYEL---------LEKGYRMERPEGCPPKVYELMRACWQWNPSDR 249
Query: 298 PNAKSL 303
P+ +
Sbjct: 250 PSFAEI 255
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 9e-07
Identities = 60/263 (22%), Positives = 103/263 (39%), Gaps = 46/263 (17%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC-CEGEERL-LVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C G L LV E++P +L
Sbjct: 36 VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195
+L + + R ++ LY +Q ++Y SK R ++ DL T IL + + ++
Sbjct: 96 DYL---QKHRERLDHR-KLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIG 150
Query: 196 CFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI 248
FGL K K Y + + PE L + S V+SFG +L +L +
Sbjct: 151 DFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDK 210
Query: 249 ---PPS-----------------HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288
PP+ H ++L++ L C E+ +
Sbjct: 211 SCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGC---------PAEIYAIMKE 261
Query: 289 CLQYEPRERPNAKSLVASLTPLQ 311
C +P +RP+ L + ++
Sbjct: 262 CWNNDPSQRPSFSELALQVEAIR 284
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 49.4 bits (119), Expect = 1e-06
Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 38/161 (23%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP--- 217
L AL Y S+ + L+ D+ I +G +L FG+ K S+ +
Sbjct: 112 LCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTVDLAKTVV 164
Query: 218 --PEYLRTGRVIPE----------SVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLML 265
P YL PE S ++S G +L +L + KH P G+N L L
Sbjct: 165 GTPYYLS-----PELCQNKPYNYKSDIWSLGCVLYELCTLKH--P------FEGENLLEL 211
Query: 266 MDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSL 303
L+G + + +EL L S LQ +P ERP+ +
Sbjct: 212 ALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 65/289 (22%), Positives = 115/289 (39%), Gaps = 52/289 (17%)
Query: 56 DNI--VSEHGEKAPNVVYK----GLV--DEDRWIAVKRFNRSAWPDSR-QFLEEARAVGL 106
+NI V + G+ A V++ GL+ + +AVK A D + F EA +
Sbjct: 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 64
Query: 107 LRSERLVNLIGCCCEGEERLLVAEFMP----NETLSKHLFHWENQ--------------- 147
+V L+G C G+ L+ E+M NE L +
Sbjct: 65 FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNP 124
Query: 148 -PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206
P+ ++ +A +A + Y S + + ++ DL T L ++ +++ FGL +N
Sbjct: 125 LPLSCTEQLCIAKQVAAGMAYLSER-KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 183
Query: 207 KSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD----- 255
Y + + + PPE + R ES V+++G +L ++ S + P + +
Sbjct: 184 DYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS-YGMQPYYGMAHEEVI 242
Query: 256 -LIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
+R N L D+C EL L C P +RP+ S+
Sbjct: 243 YYVRDGNVLSCPDNC---------PLELYNLMRLCWSKLPSDRPSFASI 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 2e-06
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 36/234 (15%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWA 152
DS F E A + L + LV L G C +E ++V E++ L L H E +
Sbjct: 44 DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFL-HREKNNVSLH 101
Query: 153 MRVRVALYLAQALDYCSSK--------GRALY---HDLNTYRILFDQDGNPRLSCFGLMK 201
++ VA LA AL Y K G+ + + LN + F + +P + L +
Sbjct: 102 WKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR 161
Query: 202 NSRDGKSYSTNLAFTPPEYLRTGRVIPESVV--YSFGTLLLDLLSGKHIP-----PSHAL 254
R + + PE +R G+ +SFGT LL++ S P S
Sbjct: 162 EERVERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE 216
Query: 255 DLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308
+ ++ L + D EL L ++C Y+P +RP+ ++++ L
Sbjct: 217 RFYQDQHRLPMPDC-----------AELANLINQCWTYDPTKRPSFRAILRDLN 259
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 2e-06
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 443
G+ ++ D+ A+E Y ++ + P + Y +EAL D +
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALE----LDPDNADAYYNLAAAYYKLGKYEEALEDYEK 59
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484
A + PD A+Y A + LG +A E + L+
Sbjct: 60 ALELDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELDPN 100
|
Length = 100 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 49.0 bits (116), Expect = 2e-06
Identities = 52/245 (21%), Positives = 105/245 (42%), Gaps = 22/245 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+A+K+ N P + E + L++ +VN + G+E +V E++ +L+
Sbjct: 47 VAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV 106
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
+ M A V QAL++ + + ++ D+ + +L DG+ +L+ FG
Sbjct: 107 V---TETCMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFGFC 162
Query: 201 KNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL 256
+S + + TP PE + P+ ++S G + ++++ G+ PP +
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNENP 220
Query: 257 IRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL-----------VA 305
+R +L+ + E +RCL+ + +R +AK L ++
Sbjct: 221 LRAL-YLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLS 279
Query: 306 SLTPL 310
SLTPL
Sbjct: 280 SLTPL 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 2e-06
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL EA + L+ ++LV L + E ++ EFM +L L E +
Sbjct: 48 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 106
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+ +A+ + + + ++ DL IL +++ FGL + +R+G +
Sbjct: 107 FSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 165
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP------PSHALDLIRGKNFL 263
+ +T PE + G +S V+SFG LL+++++ IP P L RG +
Sbjct: 166 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-M 222
Query: 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
++C E EL + RC + P ERP + + + L
Sbjct: 223 PRPENCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 3e-06
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 20/251 (7%)
Query: 69 VVYKG-LVDED---RWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE 123
VY G L+D D AVK NR + + QFL+E + +++L+G C E
Sbjct: 10 CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69
Query: 124 -ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTY 182
L+V +M + L + + P + + L +A+ ++Y +SK + ++ DL
Sbjct: 70 GSPLVVLPYMKHGDLRNFIRSETHNPTVKDL-IGFGLQVAKGMEYLASK-KFVHRDLAAR 127
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYS 234
+ D+ +++ FGL ++ D + YS + + + E L+T + +S V+S
Sbjct: 128 NCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWS 187
Query: 235 FGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294
FG LL +L++ + PP +D +L+ L+ + D L + C +P
Sbjct: 188 FGVLLWELMT-RGAPPYPDVDSFDITVYLLQGRRLLQPEYCPD---PLYEVMLSCWHPKP 243
Query: 295 RERPNAKSLVA 305
RP LV+
Sbjct: 244 EMRPTFSELVS 254
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 33/251 (13%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEER 125
VVYKGL ++ ++A+K+ + + + ++E + L+ +V IG +
Sbjct: 15 VVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSL 74
Query: 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-------D 178
++ E+ N +L + + + P VA+Y+ Q L +G A H D
Sbjct: 75 YIILEYAENGSLRQIIKKFGPFP-----ESLVAVYVYQVL-----QGLAYLHEQGVIHRD 124
Query: 179 LNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYS 234
+ IL +DG +L+ FG+ D ++ TP PE + S ++S
Sbjct: 125 IKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWS 184
Query: 235 FGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC--LEGHFSNDDGTELVRLASRCLQY 292
G +++LL+G PP + L+ + F ++ D L S EL +C Q
Sbjct: 185 LGCTVIELLTGN--PPYYDLNPMAAL-FRIVQDDHPPLPEGISP----ELKDFLMQCFQK 237
Query: 293 EPRERPNAKSL 303
+P RP AK L
Sbjct: 238 DPNLRPTAKQL 248
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 48.6 bits (115), Expect = 3e-06
Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 63 GEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
G+ A VY + V + +A+++ N P + E + ++ +VN +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
G+E +V E++ +L+ + + A R L QAL++ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSN-QVIHRDIKS 144
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG+ +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+ ++++ G+ PP + +R +L+ + E +RCL + +R
Sbjct: 205 MAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
Query: 298 PNAKSL-----------VASLTPLQKEAE 315
+AK L ++SLTPL A+
Sbjct: 262 GSAKELLQHQFLKIAKPLSSLTPLIAAAK 290
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 60/270 (22%), Positives = 107/270 (39%), Gaps = 45/270 (16%)
Query: 58 IVSEHGEKAPNVVYKGLVDEDRW----IAVKRFNRSAWPDSR-QFLEEARAVGLLRSERL 112
V G+ + VVYK + A+K+ + + R Q L E + + S +
Sbjct: 5 RVKVLGQGSSGVVYKVR---HKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYV 61
Query: 113 VNLIGCCCEGEERLLVAEFMPNETLS---KHLFHWENQPMKWAMRVRVALYLAQALDYCS 169
V G + E +V E+M +L+ K + + +A + + LDY
Sbjct: 62 VKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLA-----YIARQILKGLDYLH 116
Query: 170 SKGRALYHDLNTYRILFDQDGNPRLSCFG---LMKNSRDGK-SYSTNLAFTPPEYLRTGR 225
+K ++ D+ +L + G +++ FG +++N+ D ++ + + PE R
Sbjct: 117 TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPE-----R 171
Query: 226 VIPESVVY-----SFGTLLLDLLSGKH-IPPSHALDLIRGKNFLM--LMDSCL----EGH 273
+ ES Y S G LL+ GK P LM + D
Sbjct: 172 IQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFE----LMQAICDGPPPSLPAEE 227
Query: 274 FSNDDGTELVRLASRCLQYEPRERPNAKSL 303
FS + + + S CLQ +P++RP+A L
Sbjct: 228 FS-PEFRDFI---SACLQKDPKKRPSAAEL 253
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 5e-06
Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 20/221 (9%)
Query: 94 SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF-HWENQPMKWA 152
S F E A + + + +V L G C E ++V EF+ L LF H ++ +
Sbjct: 48 SLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLD--LFMHRKSDVLTTP 105
Query: 153 MRVRVALYLAQALDYCSSK----GRALYHDLNTYRILFDQDGNP--RLSCFGLMKNSRDG 206
+ +VA LA AL Y K G ++ R D + P +LS G+
Sbjct: 106 WKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR 165
Query: 207 KSYSTNLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLML 265
+ + + PE + + + + +SFGT L ++ IP L + F
Sbjct: 166 QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK-TLAEKERFY-- 222
Query: 266 MDSCLEGHF--SNDDGTELVRLASRCLQYEPRERPNAKSLV 304
EG EL L + C+ Y+P +RP ++++
Sbjct: 223 -----EGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIM 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 6e-06
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 27/266 (10%)
Query: 63 GEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
G+ A VY + V + +A+K+ N P + E + + +VN +
Sbjct: 28 GQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV 87
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
G+E +V E++ +L+ + + A R L QAL++ S ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 143
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG+ +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV--RLASRCLQYEPR 295
+ ++++ G+ PP + +R L L+ + N + + +RCL+ +
Sbjct: 204 MAIEMVEGE--PPYLNENPLRA---LYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVE 258
Query: 296 ERPNAKSL-----------VASLTPL 310
+R +AK L ++SLTPL
Sbjct: 259 KRGSAKELLQHPFLKIAKPLSSLTPL 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 16/226 (7%)
Query: 81 IAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139
+AVK + ++FL EA + L +V LIG C+GE +LV E P L K
Sbjct: 26 VAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIG-VCKGEPLMLVMELAPLGPLLK 84
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
+L + + + + +A +A + Y SK ++ DL +L ++S FG+
Sbjct: 85 YLK--KRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVNRHQAKISDFGM 141
Query: 200 MKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH 252
+ G Y L + PE + G+ +S V+S+G L + S P
Sbjct: 142 SRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGE 201
Query: 253 ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298
++G + +++S + E+ + C +Y P +RP
Sbjct: 202 ----MKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRP 243
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 2e-05
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 148 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207
P++ + + + LDY S+ R ++ D+ +L + G+ +L+ FG+ D +
Sbjct: 97 PLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155
Query: 208 SYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL 263
TP PE ++ ++ ++S G ++L G+ PP+ L +R FL
Sbjct: 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMRVL-FL 212
Query: 264 MLMDS--CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
+ +S LEG +S CL +PR RP AK L+
Sbjct: 213 IPKNSPPTLEGQYSK----PFKEFVEACLNKDPRFRPTAKELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 44/264 (16%)
Query: 81 IAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL-- 137
+AVK +A + R L E + + ++ L G C + LL+ E+ +L
Sbjct: 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92
Query: 138 --------------------SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
S +L + + + + + A +++ + Y + + ++
Sbjct: 93 FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM-KLVHR 151
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESV 231
DL +L + ++S FGL ++ + SY + + E L +S
Sbjct: 152 DLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSD 211
Query: 232 VYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286
V+SFG LL ++++ G + I P +L++ + ++C E E+ L
Sbjct: 212 VWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSE---------EMYNLM 262
Query: 287 SRCLQYEPRERPNAKSLVASLTPL 310
C + EP +RP + L +
Sbjct: 263 LTCWKQEPDKRPTFADISKELEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 21/161 (13%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
RQ LE R R LV L + L+ +++ L HL+ E+
Sbjct: 55 RQVLEAVR-----RCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTES---- 105
Query: 155 VRVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-----NSRDG 206
V +Y+A+ ALD+ G +Y D+ IL D +G+ L+ FGL K
Sbjct: 106 -EVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERA 163
Query: 207 KSYSTNLAFTPPEYLRTGRVIPESVV--YSFGTLLLDLLSG 245
S+ + + PE +R G + V +S G L +LL+G
Sbjct: 164 YSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 45/260 (17%)
Query: 70 VYKGL-VDEDRWIAVKRF-----NRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE 123
VY+GL +D+ + AVK ++ +Q +E + L+ +V +G E +
Sbjct: 16 VYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED 75
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT-Y 182
+ E +P +L+K L + + P + LY Q L G HD NT +
Sbjct: 76 NLYIFLELVPGGSLAKLLKKYGSFP-----EPVIRLYTRQILL-----GLEYLHDRNTVH 125
Query: 183 R------ILFDQDGNPRLSCFGLMKNS---RDGKSYSTNLAFTPPEYL-RTGRVIPESVV 232
R IL D +G +L+ FG+ K KS+ + + PE + + G + +
Sbjct: 126 RDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADI 185
Query: 233 YSFGTLLLDLLSGKHIPPSHALDLI-------RGKNFLMLMDSCLEGHFSNDDGTELVRL 285
+S G +L++ +GK PP L+ + R K + D H S D+ + +
Sbjct: 186 WSLGCTVLEMATGK--PPWSQLEGVAAVFKIGRSKELPPIPD-----HLS-DEAKDFILK 237
Query: 286 ASRCLQYEPRERPNAKSLVA 305
CLQ +P RP A L+
Sbjct: 238 ---CLQRDPSLRPTAAELLE 254
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 2e-05
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G +V L G G ++V E+M N L L E Q + A +
Sbjct: 51 RGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQ 108
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN- 212
+ L LA + Y S G ++ L +++L + D ++S F ++ + Y+T
Sbjct: 109 LMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMS 167
Query: 213 ----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+ + PE ++ S V+SFG ++ +++S
Sbjct: 168 GKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL--------------FH 143
+E + +G + + ++NL+G C + ++ E+ L ++L
Sbjct: 74 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ 131
Query: 144 WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203
+ + + V A +A+ ++Y +SK + ++ DL +L +D +++ FGL ++
Sbjct: 132 VPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 190
Query: 204 RDGKSY--STN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIPPSHALD 255
Y +TN + + PE L +S V+SFG LL ++ L G P +
Sbjct: 191 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250
Query: 256 LIRGKNFLMLMDSCLEGHFSNDDGT---ELVRLASRCLQYEPRERPNAKSLVASL 307
L F +L EGH + EL + C P +RP K LV L
Sbjct: 251 L-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 3e-05
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 12/188 (6%)
Query: 79 RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+ +AVK+ + E + + E +V + G+E +V EF+ L+
Sbjct: 46 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+ H M V L + +AL ++G ++ D+ + IL DG +LS FG
Sbjct: 106 DIVTHTR---MNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFG 161
Query: 199 LMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPP 250
+L TP PE + PE ++S G ++++++ G+ + PP
Sbjct: 162 FCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 221
Query: 251 SHALDLIR 258
A+ +IR
Sbjct: 222 LKAMKMIR 229
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 63/253 (24%), Positives = 101/253 (39%), Gaps = 29/253 (11%)
Query: 70 VYKGL-VDEDRWIAVK--RFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126
VY + +D +AVK R + ++ +E + + LL+ LV G E+
Sbjct: 16 VYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVY 75
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
+ E+ TL + L H + L L + L Y S G ++ D+ I
Sbjct: 76 IFMEYCSGGTLEELLEHGRILDEH--VIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFL 132
Query: 187 DQDGNPRLSCFG----LMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPE--SV-VYSF 235
D +G +L FG L N+ +LA TP PE + G+ + ++S
Sbjct: 133 DHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSL 192
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF-----SNDDGTELVRLASRCL 290
G ++L++ +GK P LD N +M GH S E RCL
Sbjct: 193 GCVVLEMATGK--RPWSELD-----NEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCL 245
Query: 291 QYEPRERPNAKSL 303
+ +P++RP A L
Sbjct: 246 ESDPKKRPTASEL 258
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 5e-05
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 156 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212
R Y A+ L + SKG +Y DL IL D DG+ +++ FG+ K + G + +
Sbjct: 97 RATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT 155
Query: 213 LAFTP----PEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALD 255
TP PE L G+ SV +SFG LL ++L G+ P H D
Sbjct: 156 FCGTPDYIAPEIL-LGQKYNTSVDWWSFGVLLYEMLIGQ--SPFHGHD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 6e-05
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 11/101 (10%)
Query: 157 VALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYS- 210
V YLA+ ALD+ S G +Y DL IL D++G+ +L+ FGL K S D K+YS
Sbjct: 100 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158
Query: 211 -TNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLSGKHIP 249
+ + PE + R G +SFG L+ ++L+G +P
Sbjct: 159 CGTVEYMAPEVVNRRGHTQSAD-WWSFGVLMFEMLTG-SLP 197
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 6e-05
Identities = 55/258 (21%), Positives = 96/258 (37%), Gaps = 39/258 (15%)
Query: 70 VYKG-LVDEDRW------IAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLIGCCCE 121
VY+G D +AVK + A + +FL+EA + +V L+G C
Sbjct: 11 VYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL 70
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS-----SKGRALY 176
E + ++ E M L +L + + L L LD + ++
Sbjct: 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKEL-LDICLDVAKGCVYLEQMHFIH 129
Query: 177 HDLNTYRILFDQDGNPR-----LSCFGLMKNSRDGKSYST------NLAFTPPEYLRTGR 225
DL L + G + FGL ++ Y + + PE L G+
Sbjct: 130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK 189
Query: 226 VIPESVVYSFGTLLLDLLSGKHIP-PSHA----LDLIRGKNFLMLMDSCLEGHFSNDDGT 280
+S V+SFG L+ ++L+ P P+ L + L ++C +
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPD--------- 240
Query: 281 ELVRLASRCLQYEPRERP 298
++ +L + C +P ERP
Sbjct: 241 KIYQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 9e-05
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 18/152 (11%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP--- 217
+ + LDY S+ + ++ D+ +L + G +L+ FG+ D + TP
Sbjct: 110 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 168
Query: 218 -PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEG 272
PE ++ ++ ++S G ++L G+ + P L LI N LEG
Sbjct: 169 APEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN-----PPTLEG 223
Query: 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
++S L CL EP RP AK L+
Sbjct: 224 NYSK----PLKEFVEACLNKEPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 1e-04
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYL-LSDMPQEALGDAMQAQ 445
K G+A F+ D+ AIE Y ++ + + L YL L +EAL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 446 VISP 449
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL---------FHWE--- 145
+E + +G + + ++NL+G C + ++ E+ L ++L + ++
Sbjct: 71 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR 128
Query: 146 --NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-- 201
++ M + V +A+ ++Y +S+ + ++ DL +L ++ +++ FGL +
Sbjct: 129 VPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDV 187
Query: 202 NSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIPPSHALD 255
N+ D +TN + + PE L +S V+SFG L+ ++ L G P +
Sbjct: 188 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247
Query: 256 LIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASL 307
L F +L EGH + EL + C P RP K LV L
Sbjct: 248 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDL 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 43/200 (21%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYHDLNTYR 183
LV E++P L+ L + + A +Y+A+ AL+Y S G ++ DL
Sbjct: 70 LVMEYLPGGDLASLLENVGSLDEDVA-----RIYIAEIVLALEYLHSNG-IIHRDLKPDN 123
Query: 184 ILFDQDGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVV---- 232
IL D +G+ +L+ FGL K + + P+Y+ PE ++
Sbjct: 124 ILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIA-----PEVILGQGH 178
Query: 233 ------YSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL---- 282
+S G +L + L G IPP H G+ + + L G + E+
Sbjct: 179 SKTVDWWSLGCILYEFLVG--IPPFH------GETPEEIFQNILNGKIEWPEDVEVSDEA 230
Query: 283 VRLASRCLQYEPRERPNAKS 302
+ L S+ L +P +R AKS
Sbjct: 231 IDLISKLLVPDPEKRLGAKS 250
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 53/256 (20%), Positives = 102/256 (39%), Gaps = 43/256 (16%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR--- 154
+E + +G + + ++NL+G C + ++ E+ L ++L M ++
Sbjct: 68 MEMMKMIG--KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125
Query: 155 -----------VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203
V A +A+ ++Y +S+ + ++ DL +L +D +++ FGL ++
Sbjct: 126 LPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDV 184
Query: 204 RDGKSY--STN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-----KHIPPSH 252
+ Y +TN + + PE L +S V+SFG LL ++ + IP
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244
Query: 253 ALDLIRGKNFLMLMDSCLEGHFSNDDGT---ELVRLASRCLQYEPRERPNAKSLVASLTP 309
L++ EGH + EL + C P +RP K LV L
Sbjct: 245 LFKLLK------------EGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDR 292
Query: 310 LQKEAEVPSYTLMGIP 325
+ Y + +P
Sbjct: 293 VLTVTSTDEYLDLSVP 308
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 1e-04
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 51/267 (19%)
Query: 81 IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139
+AVK A ++R FL+E + + L+ ++ L+G C + + ++ E+M N L++
Sbjct: 49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108
Query: 140 HLFHW-------ENQP----------MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTY 182
L + ++ + VAL +A + Y SS ++ DL T
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATR 167
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVIPESVVYSFG 236
L ++ +++ FG+ +N G Y P E + G+ S V++FG
Sbjct: 168 NCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG 227
Query: 237 TLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL---EGHFSNDDGTE------------ 281
L ++L L + + + L D + G F D G +
Sbjct: 228 VTLWEILM-----------LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQG 276
Query: 282 LVRLASRCLQYEPRERPNAKSLVASLT 308
L L +C + RERP+ + A LT
Sbjct: 277 LYELMLQCWSRDCRERPSFSDIHAFLT 303
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 1e-04
Identities = 58/270 (21%), Positives = 114/270 (42%), Gaps = 29/270 (10%)
Query: 63 GEKAPNVVYKGL-VDEDRWI----AVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLI 116
G A VYKG+ V E + A+K N + P + +F++EA + + LV L+
Sbjct: 16 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 75
Query: 117 GCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
G C + LV + MP+ L ++ H + + + + +A+ + Y + R ++
Sbjct: 76 GVCLSPTIQ-LVTQLMPHGCLLDYV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVH 132
Query: 177 HDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNLAFTPPEYL-----RTGRVIPES 230
DL +L + +++ FGL + D K Y+ + P +++ + +S
Sbjct: 133 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS 192
Query: 231 VVYSFGTLLLDLLS--GK---HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285
V+S+G + +L++ GK IP DL+ L C ++ +
Sbjct: 193 DVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICT---------IDVYMV 243
Query: 286 ASRCLQYEPRERPNAKSLVASLTPLQKEAE 315
+C + RP K L A + + ++ +
Sbjct: 244 MVKCWMIDADSRPKFKELAAEFSRMARDPQ 273
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 24/190 (12%)
Query: 76 DEDRWIAVKRFNRSAWPDSRQF----LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131
+ + +A+K+F S D + + E R + LR E LVNLI + LV EF
Sbjct: 24 ETGQIVAIKKFLES--EDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81
Query: 132 MPNETLSKHLFHWENQPMKW-AMRVRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQD 189
+ + L E P RVR L+ + + +++C S ++ D+ IL Q
Sbjct: 82 VDHTVLDD----LEKYPNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQS 136
Query: 190 GNPRLSCFGLMKN-SRDGKSYSTNLA---FTPPEYL----RTGRVIPESVVYSFGTLLLD 241
G +L FG + + G+ Y+ +A + PE L + GR + +++ G L+ +
Sbjct: 137 GVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVD---IWAVGCLVTE 193
Query: 242 LLSGKHIPPS 251
+L+G+ + P
Sbjct: 194 MLTGEPLFPG 203
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 60/284 (21%), Positives = 114/284 (40%), Gaps = 48/284 (16%)
Query: 55 ADNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRF----NRSAWPDSRQFLEEARAVG 105
A + E GE A +YKG + D + +A+K N W + F +EA +
Sbjct: 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE---FQQEASLMA 62
Query: 106 LLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW-----------ENQPMKWAMR 154
L +V L+G + + ++ E++ L + L E+ +K ++
Sbjct: 63 ELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLD 122
Query: 155 ----VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYS 210
+ +A+ +A ++Y SS ++ DL IL + + ++S GL + Y
Sbjct: 123 HGDFLHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYR 181
Query: 211 TN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRG 259
+ + PPE + G+ +S ++SFG +L ++ S P ++++R
Sbjct: 182 VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK 241
Query: 260 KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
+ L + C +S L + C Q P RP K +
Sbjct: 242 RQLLPCSEDCPPRMYS---------LMTECWQEGPSRRPRFKDI 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 40/232 (17%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ-PMKWAMRV 155
F E A + + L + G C G E ++V EF+ + L L + + P+ W ++
Sbjct: 63 FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KI 120
Query: 156 RVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDG------------NPRLSCFGLMKN 202
VA LA AL Y K L H ++ IL + G +P +S L +
Sbjct: 121 TVAQQLASALSYLEDKN--LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE 178
Query: 203 SRDGKSYSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIP-----PSHALDL 256
R + + + PE + G + + +SFGT LL++ +P PS
Sbjct: 179 ERVER-----IPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF 233
Query: 257 IRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308
K+ L SC EL L S+CL YEP +RP+ ++++ LT
Sbjct: 234 YEKKHRLP-EPSC----------KELATLISQCLTYEPTQRPSFRTILRDLT 274
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 3e-04
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 156 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212
R Y AQ L++ + R +Y DL +L D DGN R+S GL +DG+S +
Sbjct: 98 RACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156
Query: 213 LAFTP----PEYLRTGRVIPESVVY-SFGTLLLDLLSGK 246
A TP PE L+ G SV Y + G L ++++ +
Sbjct: 157 YAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 4e-04
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 107 LRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALD 166
+ +V+ G+E +V E+M +L+ + M V + Q L+
Sbjct: 72 CKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTD-IITQNFVRMNEPQIAYVCREVLQGLE 130
Query: 167 YCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLR 222
Y S+ ++ D+ + IL +DG+ +L+ FG KS ++ TP PE ++
Sbjct: 131 YLHSQNV-IHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIK 189
Query: 223 TGRVIPESVVYSFGTLLLDLLSGK--HI--PPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278
P+ ++S G + +++ G+ ++ PP AL LI K L + +S
Sbjct: 190 RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNP---EKWSP-- 244
Query: 279 GTELVRLASRCLQYEPRERPNAKSL 303
E ++CL +P +RP+A+ L
Sbjct: 245 --EFKDFLNKCLVKDPEKRPSAEEL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 4e-04
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 99 EEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVA 158
+E R + L ++ ++G CE L E+M ++S HL + K A+ +
Sbjct: 52 KEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVS-HLLS-KYGAFKEAVIINYT 109
Query: 159 LYLAQALDYCSSKGRALYHDLNTYRILFDQDGNP-RLSCFGLM-----KNSRDGK---SY 209
L + L Y + ++ D+ +L D G R++ FG K + G+
Sbjct: 110 EQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQL 168
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC 269
+AF PE LR + V+S G +++++ + K PP +A + L+ +
Sbjct: 169 LGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK--PPWNA-EKHSNHLALIFKIAS 225
Query: 270 LEG------HFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
H S L + RCL+ +P +RP ++ L+
Sbjct: 226 ATTAPSIPEHLSPG----LRDVTLRCLELQPEDRPPSRELL 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 14/219 (6%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA + L E L+ L G ++V E P +L L +
Sbjct: 43 FLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCD 101
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN---- 212
A+ +A + Y SK R ++ DL IL D ++ FGLM+ + +
Sbjct: 102 YAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL 160
Query: 213 ---LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC 269
A+ PE LRT S V+ FG L ++ + P + + G L +D
Sbjct: 161 KVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG----LSGSQILKKIDKE 216
Query: 270 LEG-HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
E ++ + +C + P +RP +L L
Sbjct: 217 GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFL 255
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
G+E +V EF+ L+ + H + A V L + +AL + ++G ++ D+ +
Sbjct: 88 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLAVLKALSFLHAQG-VIHRDIKS 143
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG +LS FG +L TP PE + E ++S G
Sbjct: 144 DSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGI 203
Query: 238 LLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT--ELVRLASRCLQ 291
++++++ G+ + PP A+ IR D+ L N L R L
Sbjct: 204 MVIEMVDGEPPYFNEPPLQAMKRIR--------DN-LPPKLKNLHKVSPRLRSFLDRMLV 254
Query: 292 YEPRERPNAKSLVASLTPLQKEAEVPS 318
+P +R A L+ P +A PS
Sbjct: 255 RDPAQRATAAELLNH--PFLAKAGPPS 279
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 156 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212
R Y A+ L + SKG +Y DL ++ D+DG+ +++ FG+ K + G + ++
Sbjct: 97 RATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155
Query: 213 LAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD 255
TP PE L+ + +SFG LL ++L G+ P H D
Sbjct: 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQ--SPFHGDD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 5e-04
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 33/253 (13%)
Query: 76 DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS---ERLVNLIGCCCEGEERLLVAEFM 132
+ + VK ++ D E R + + R + +V L+G C E E ++ E+
Sbjct: 33 GGETLVLVKALQKT--KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYT 90
Query: 133 PNETLSKHLF-------HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRIL 185
L + L + P+ +V + +A +D+ S R ++ DL L
Sbjct: 91 DLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS-NARFVHRDLAARNCL 149
Query: 186 FDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLL 240
++S L K+ + + Y L + PE ++ +S V+SFG L+
Sbjct: 150 VSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMW 209
Query: 241 DLLSGKHIPPSHALD------LIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294
++ + +P D L GK L + + C L +L +RC P
Sbjct: 210 EVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPS---------RLYKLMTRCWAVNP 260
Query: 295 RERPNAKSLVASL 307
++RP+ LV++L
Sbjct: 261 KDRPSFSELVSAL 273
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 6e-04
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 44/216 (20%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---KSYSTNLAFT 216
+ ALDY S+ +Y DL ++ D+DG+ +++ FGL K +DG K++ +
Sbjct: 104 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 163
Query: 217 PPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-LMLMDSCLEG 272
PE L GR + + G ++ +++ G+ P + D K F L+LM+ E
Sbjct: 164 APEVLEDNDYGRAVD---WWGLGVVMYEMMCGRL--PFYNQD--HEKLFELILME---EI 213
Query: 273 HFSNDDGTELVRLASRCLQYEPRER-----PNAKSLV-----ASLT--PLQKEAEVPSYT 320
F E L S L+ +P++R +AK ++ A + + ++ VP +
Sbjct: 214 RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFK 273
Query: 321 LMGIPHGTASTK----------QTITLTPLGEACSR 346
P T+ T Q IT+TP + S
Sbjct: 274 ----PQVTSETDTRYFDEEFTAQMITITPPDQDDSM 305
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 18/181 (9%)
Query: 81 IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139
+AVK +R FL+E + + L++ ++ L+G C + ++ E+M N L++
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106
Query: 140 HLFHWE---------NQP-MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189
L E N P + A + +A+ +A + Y +S ++ DL T L
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNH 165
Query: 190 GNPRLSCFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVIPESVVYSFGTLLLDLL 243
+++ FG+ +N G Y P E + G+ S V++FG L ++
Sbjct: 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225
Query: 244 S 244
+
Sbjct: 226 T 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 8e-04
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 156 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212
R Y A+ L + KG +Y DL +L D+DG+ +++ FG+ K + +G+ ++
Sbjct: 97 RARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST 155
Query: 213 LAFTP----PEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALD 255
TP PE L+ G+ ESV +SFG LL ++L G+ P H D
Sbjct: 156 FCGTPDYIAPEILK-GQKYNESVDWWSFGVLLYEMLIGQ--SPFHGED 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 9e-04
Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 40/176 (22%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK--NSRDGKSYSTNLAFT-- 216
L + L Y S G L+ D+ IL + DG +L+ FGL + R+ Y TN T
Sbjct: 109 LLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLW 166
Query: 217 --PPEYL----RTGRVIPESVVYSFGTLLLDLLSGKHIPP----SHALDLI--------- 257
PPE L R G PE ++S G +L +L GK I L+ I
Sbjct: 167 YRPPELLLGATRYG---PEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTD 223
Query: 258 ---RGKNFLMLMD---------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 301
G + L + L F + + L + L +P++R +A
Sbjct: 224 ENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISAD 279
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.001
Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 12/188 (6%)
Query: 79 RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+ +AVK+ + E + E +V++ G+E +V EF+ L+
Sbjct: 48 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+ H M V L + +AL Y ++G ++ D+ + IL DG +LS FG
Sbjct: 108 DIVTHTR---MNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFG 163
Query: 199 LMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPP 250
+L TP PE + E ++S G ++++++ G+ + PP
Sbjct: 164 FCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP 223
Query: 251 SHALDLIR 258
A+ IR
Sbjct: 224 LQAMRRIR 231
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 45/204 (22%), Positives = 78/204 (38%), Gaps = 49/204 (24%)
Query: 70 VYKGLVDEDRWI----------AVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGC 118
VYKG+ WI A+K P + + L+EA + + +V L+G
Sbjct: 23 VYKGV-----WIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGI 77
Query: 119 CCEGEERLLVAEFMPNETL------------SKHLFHWENQPMKWAMRVRVALYLAQALD 166
C + L+ + MP L S++L +W Q +A+ +
Sbjct: 78 CL-SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQ-------------IAKGMS 123
Query: 167 YCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN-SRDGKSYSTNLAFTP-----PEY 220
Y K R ++ DL +L + +++ FGL K D K Y P E
Sbjct: 124 YLEEK-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALES 182
Query: 221 LRTGRVIPESVVYSFGTLLLDLLS 244
+ +S V+S+G + +L++
Sbjct: 183 ILHRIYTHKSDVWSYGVTVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM--------------PNETLSKHLFH 143
+E + +G + + ++NL+G C + +V E+ P E S
Sbjct: 66 MEMMKMIG--KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR 123
Query: 144 WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203
+ + V A +A+ +++ +SK + ++ DL +L +D +++ FGL ++
Sbjct: 124 PPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVMKIADFGLARDI 182
Query: 204 RDGKSY--STN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIP--PSHA 253
Y +TN + + PE L +S V+SFG LL ++ L G P P
Sbjct: 183 HHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242
Query: 254 L-DLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
L L++ + +C + EL L C P +RP K LV L
Sbjct: 243 LFKLLKEGYRMEKPQNCTQ---------ELYHLMRDCWHEVPSQRPTFKQLVEDL 288
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 66/286 (23%), Positives = 107/286 (37%), Gaps = 48/286 (16%)
Query: 58 IVSEHGEKAPNVVYKGLV-DEDRWIAVKRF--NRSAWPDSRQFLEEARAVGLLRSERLVN 114
++ GE A VV K +A+K+F + + L E + + LR E +VN
Sbjct: 5 VLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVN 64
Query: 115 LIGCCCEGEERLLVAEFMPNETLSKHLFHWENQP--MKWAMRVRVALY-LAQALDYCSSK 171
L LV E++ TL + L E P + VR ++ L QA+ YC S
Sbjct: 65 LKEAFRRKGRLYLVFEYVER-TLLELL---EASPGGLPPDA-VRSYIWQLLQAIAYCHSH 119
Query: 172 GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--YSTNLA---FTPPEYLRTGRV 226
++ D+ IL + G +L FG + R + + +A + PE L G
Sbjct: 120 N-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELL-VGDT 177
Query: 227 I--PESVVYSFGTLLLDLLSGK-------------HI-------PPSHALDLIRGKNFLM 264
V++ G ++ +LL G+ I PPSH F
Sbjct: 178 NYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAG 237
Query: 265 L-------MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
+ +S LE + + + CL+ +P+ER L
Sbjct: 238 VAFPEPSQPES-LERRYPGKVSSPALDFLKACLRMDPKERLTCDEL 282
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 119 CCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRV-ALYLAQALDYCSSKGRALY 176
C + RL LV E++ L +FH + Q R A + AL++ +G +Y
Sbjct: 64 CFQTTSRLFLVIEYVNGGDL---MFHMQRQRKLPEEHARFYAAEICIALNFLHERG-IIY 119
Query: 177 HDLNTYRILFDQDGNPRLSCFGLMKNS-RDGKSYSTNLA---FTPPEYLRTGRVIPESVV 232
DL +L D DG+ +L+ +G+ K G + ST + PE LR
Sbjct: 120 RDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDW 179
Query: 233 YSFGTLLLDLLSGK 246
++ G L+ ++++G+
Sbjct: 180 WALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 24/141 (17%)
Query: 119 CCEGEERL-LVAEFMPNETLSKHLFHWENQ---PMKWAMRVRVALYLAQ---ALDYCSSK 171
C + E RL V EF+ L +FH + Q P + A Y A+ AL++ +
Sbjct: 64 CFQTESRLFFVIEFVSGGDL---MFHMQRQRKLPEEHAR-----FYSAEISLALNFLHER 115
Query: 172 GRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNLAFTP----PEYLRTGRV 226
G +Y DL +L D +G+ +L+ +G+ K R G + ST TP PE LR G
Sbjct: 116 G-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST-FCGTPNYIAPEILR-GED 172
Query: 227 IPESV-VYSFGTLLLDLLSGK 246
SV ++ G L+ ++++G+
Sbjct: 173 YGFSVDWWALGVLMFEMMAGR 193
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.001
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 22/194 (11%)
Query: 81 IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP----NE 135
+AVK A ++R FL+E + + L+ ++ L+ C + ++ E+M N+
Sbjct: 49 VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQ 108
Query: 136 TLSKHLFHWENQPMK-------WAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
LS+H + K ++ + +A +A + Y SS ++ DL T L +
Sbjct: 109 FLSRHEP--QEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGK 165
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVIPESVVYSFGTLLLDL 242
+ +++ FG+ +N G Y P E + G+ S V++FG L ++
Sbjct: 166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEI 225
Query: 243 LS-GKHIPPSHALD 255
L+ K P S D
Sbjct: 226 LTLCKEQPYSQLSD 239
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.002
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLL-VAEFMPNETLSKHLFHWENQPMKWAMRVR 156
+ E R + L + + CC + ++RL V E++ L ++ Q + R
Sbjct: 43 MTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLM-----FQIQRSRKFDEPR 97
Query: 157 VALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 213
Y A+ AL + G +Y DL IL D +G+ +L+ FG+ K +T
Sbjct: 98 SRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTF 156
Query: 214 AFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHA 253
TP PE L+ P ++ G L+ ++++G+ PP A
Sbjct: 157 CGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQ--PPFEA 198
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 28/119 (23%)
Query: 164 ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRT 223
AL+Y SK +Y DL IL D++G+ +L+ FG K RD ++++ L T PEYL
Sbjct: 113 ALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT-PEYL-- 165
Query: 224 GRVIPESVV----------YSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PE + ++ G L+ ++L G PP N + + L G
Sbjct: 166 ---APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP------FFDDNPFGIYEKILAG 213
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 52/228 (22%), Positives = 86/228 (37%), Gaps = 62/228 (27%)
Query: 146 NQPMKWAMRV------RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
+Q +K A R+ ++++ + + L Y K + ++ D+ IL + G +L FG+
Sbjct: 87 DQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 146
Query: 200 -------MKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH-IPP 250
M NS G +SY + PE L+ +S ++S G L+++ G++ IPP
Sbjct: 147 SGQLIDSMANSFVGTRSYMS------PERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200
Query: 251 ---------------------------SHALDLIRGKNFLMLMDSCLE--------GHFS 275
H D R L+D + G FS
Sbjct: 201 PDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFS 260
Query: 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMG 323
E +CL+ P+ER + K L P K AE+ G
Sbjct: 261 ----DEFQDFVDKCLKKNPKERADLKELTKH--PFIKRAELEEVDFAG 302
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
A +A AL Y S +Y DL IL D G+ L+ FGL K + ++ TP
Sbjct: 102 AAEIASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP 160
Query: 218 ----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD 255
PE LR + G +L ++L G +PP ++ D
Sbjct: 161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 146 NQPMKWAMRV------RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
+Q +K A R+ +V++ + + L Y K + ++ D+ IL + G +L FG+
Sbjct: 91 DQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV 150
Query: 200 MKNSRD--GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH-IPPSHALDL 256
D S+ ++ PE L+ +S ++S G L++L G++ IPP A +L
Sbjct: 151 SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 14/246 (5%)
Query: 59 VSEHGEKAPNVVYKGLVDEDRWI-AVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLI 116
+SE G VV+K I A K + P R Q + E + + S +V
Sbjct: 10 ISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 69
Query: 117 GCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
G E + E M +L + L P + +V +A+ + L Y K + ++
Sbjct: 70 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREKHKIMH 127
Query: 177 HDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSYSTNLAFTPPEYLRTGRVIPESVVYS 234
D+ IL + G +L FG+ D S+ ++ PE L+ +S ++S
Sbjct: 128 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 187
Query: 235 FGTLLLDLLSGKH-IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL-QY 292
G L+++ G++ IPP A K ++ +EG + + + R R L Y
Sbjct: 188 MGLSLVEMAIGRYPIPPPDA------KELELMFGCPVEGDPAESETSPRPRPPGRPLSSY 241
Query: 293 EPRERP 298
P RP
Sbjct: 242 GPDSRP 247
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.004
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQ-PMKWAMRV 155
+ E R + L + + C + +RL V E++ L ++H + K V
Sbjct: 48 MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGKFKEPHAV 104
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNLA 214
A +A L + SKG +Y DL ++ D +G+ +++ FG+ K N GK+ T
Sbjct: 105 FYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCG 163
Query: 215 FTPPEYLRTGRVIPESVVY----------SFGTLLLDLLSGKHIPP 250
P+Y + PE + Y +FG LL ++L+G+ PP
Sbjct: 164 --TPDY-----IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--PP 200
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.004
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 23/168 (13%)
Query: 145 ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-PRLSCFGLMKNS 203
E+Q + W V+++L L D + L+ D+ + I ++G +L FG+ +
Sbjct: 100 EDQILSWF--VQISLGLKHIHDR-----KILHRDIKSQNIFLSKNGMVAKLGDFGIARQL 152
Query: 204 RDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG 259
D + TP PE + ++ ++S G +L +L + KH P G
Sbjct: 153 NDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKH--P------FEG 204
Query: 260 KNFLMLMDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLV 304
N L+ +G+F S + +L L S+ + PR+RP+ S++
Sbjct: 205 NNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSIL 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 38.9 bits (90), Expect = 0.004
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 163 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----P 218
+ LDY S+ + ++ D+ +L + G+ +L+ FG+ D + TP P
Sbjct: 112 KGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 170
Query: 219 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278
E ++ ++ ++S G ++L G+ PP+ + +R L L+ + +
Sbjct: 171 EVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDMHPMR---VLFLIPKNNPPTLTGEF 225
Query: 279 GTELVRLASRCLQYEPRERPNAKSLV 304
CL +P RP AK L+
Sbjct: 226 SKPFKEFIDACLNKDPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.004
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 19/163 (11%)
Query: 157 VALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 213
V YL Q A+ Y G L+ D+ T I + G +L FG+ K S + +
Sbjct: 103 VLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETV 161
Query: 214 AFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC 269
TP PE + + +S +++ G +L +LL+ K N L L+
Sbjct: 162 VGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRT--------FDATNPLNLVVKI 213
Query: 270 LEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASLTP 309
++G+++ +EL+ L LQ +P +RP A ++
Sbjct: 214 VQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 488 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.98 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.98 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.97 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.97 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.97 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.95 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.93 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.91 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.91 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.9 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.9 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.89 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.88 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.88 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.86 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.86 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.85 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.85 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.84 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.83 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.82 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.81 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.8 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.79 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.79 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.79 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.77 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.76 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.73 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.73 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.71 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.71 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.68 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.68 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.65 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.65 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.6 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.6 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.6 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.59 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.59 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.59 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.58 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.56 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.52 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.5 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.5 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.48 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.47 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.45 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.45 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.44 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.42 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.42 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.41 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.41 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.41 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.4 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.39 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.36 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.35 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.35 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.35 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.34 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.34 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.33 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.33 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.32 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.32 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.32 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.31 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.29 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.28 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.28 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.28 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.28 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.27 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.25 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.24 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.24 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.24 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.23 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.22 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.2 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.17 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.17 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.17 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.17 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.16 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.15 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.15 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.14 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.14 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.14 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 99.14 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.14 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.13 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-54 Score=422.68 Aligned_cols=274 Identities=35% Similarity=0.621 Sum_probs=237.2
Q ss_pred CccccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccc
Q 011349 37 GFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI 116 (488)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 116 (488)
..+.|++.++..||++|+..+++ |+|+||.||+|.+.+|+.||||++........++|.+|+.++.+++|||+|+++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 57789999999999999999888 999999999999999999999988776533145699999999999999999999
Q ss_pred cceecCC-eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccccccCCceeecCCCCCe
Q 011349 117 GCCCEGE-ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG--RALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 117 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~iiH~Dlkp~Nill~~~~~~k 193 (488)
|||.+.+ ..+||+|||++|+|.++|+.....+++|.++++|+.++|+||+|||+.. +||||||||+|||||+++++|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999988 5999999999999999998643338999999999999999999999965 599999999999999999999
Q ss_pred eccCCCcccCCC-CCcc----ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcc-----------hhhhh
Q 011349 194 LSCFGLMKNSRD-GKSY----STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH-----------ALDLI 257 (488)
Q Consensus 194 l~Dfgla~~~~~-~~~~----~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~-----------~~~~~ 257 (488)
|+|||+|+.... .... .||.+|+|||++..+..+.++|||||||+|+||+||+++.... ....+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999987654 3322 7899999999999999999999999999999999999765421 12234
Q ss_pred hccccccccccccC-CCCCh-hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 258 RGKNFLMLMDSCLE-GHFSN-DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 258 ~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
....+.+++|+.+. ..++. .....+..++.+|++.+|.+||+|.+|++.|+.+...
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 44567788888876 55554 4667799999999999999999999999999665544
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-54 Score=395.94 Aligned_cols=246 Identities=20% Similarity=0.256 Sum_probs=209.8
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCe-eeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE-RLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~lv~e~ 131 (488)
+-..++.||+|..|+||++.++ +++.+|+|++..... ...+++.+|+++++.++||+||.+||+|..+.. ++|+|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 3456788999999999999954 688899999965432 335689999999999999999999999999985 9999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KS 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 208 (488)
|+||||++++. ..+++++....+|+.+|++||.|||+ .+ ||||||||+|||++..|.+||||||.++...+. .+
T Consensus 160 MDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~t 236 (364)
T KOG0581|consen 160 MDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANT 236 (364)
T ss_pred cCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhccc
Confidence 99999999997 44779999999999999999999996 56 999999999999999999999999999876554 57
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc---cCCCCChh-hHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC---LEGHFSND-DGTELVR 284 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~l~~ 284 (488)
+.||..|||||.+++..|+.++||||||++++|+.+|+.|++..... ...+.+++..+ ..+..|.. +++++++
T Consensus 237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~---~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~ 313 (364)
T KOG0581|consen 237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP---YLDIFELLCAIVDEPPPRLPEGEFSPEFRS 313 (364)
T ss_pred ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC---CCCHHHHHHHHhcCCCCCCCcccCCHHHHH
Confidence 89999999999999999999999999999999999999887664111 11112222221 23345554 7899999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++..||++||.+|||+.++++|
T Consensus 314 FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 314 FVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHHHHhcCCcccCCCHHHHhcC
Confidence 9999999999999999999998
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-52 Score=401.92 Aligned_cols=253 Identities=27% Similarity=0.405 Sum_probs=216.4
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCC-eeeEEEecCCC
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGE-ERLLVAEFMPN 134 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~ 134 (488)
+...+|+|+||+||+|.+.....||||++....... .+.|.+|+.+|.+++|||||+++|+|..+. ..+|||||+++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 344579999999999999655559999998655333 458999999999999999999999998887 79999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCC---C-Ccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRD---G-KSY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~---~-~~~ 209 (488)
|+|.+++.......+++..++.|+.||++||.|||++++||||||||+|||++.++ ++||+|||+++.... . ...
T Consensus 125 GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~ 204 (362)
T KOG0192|consen 125 GSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSV 204 (362)
T ss_pred CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCC
Confidence 99999997544678999999999999999999999998789999999999999998 999999999986553 2 236
Q ss_pred ccccCCCCccccc--cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 210 STNLAFTPPEYLR--TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 210 ~~t~~y~aPE~~~--~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
.||+.|||||++. ...++.|+|||||||++|||+||+.||..... ......+.....++.++..+++.+..|+.
T Consensus 205 ~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~----~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~ 280 (362)
T KOG0192|consen 205 AGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP----VQVASAVVVGGLRPPIPKECPPHLSSLME 280 (362)
T ss_pred CCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhcCCCCCCCccCCHHHHHHHH
Confidence 8899999999999 56899999999999999999999998876532 11122233344555666668899999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+||..||..||++.+++..|+.+....
T Consensus 281 ~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 281 RCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred HhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999887754
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-50 Score=375.52 Aligned_cols=248 Identities=19% Similarity=0.236 Sum_probs=205.7
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..+|.+.++||+|+||+||+|+ .+++..||||.+.... ....+.+..|+.+|+.++|||||.+++++..++.+||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 3456777889999999999999 4568999999998764 233566889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC------CCCeeccCCCcccC
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD------GNPRLSCFGLMKNS 203 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~------~~~kl~Dfgla~~~ 203 (488)
|||.||+|.++|+ ..+.+++..+..++.||+.||++||+++ ||||||||+||||+.. -.+||+|||+|+..
T Consensus 89 EyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 89 EYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 9999999999998 4567999999999999999999999999 9999999999999754 45899999999988
Q ss_pred CCCC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 204 RDGK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 204 ~~~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
.+.. +.+|++-|||||+++.++|+.|+|+||+|++||+|++|+.||........... -.......+..+...+.
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~---~~k~~~~~~~~~~~~s~ 242 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLY---IKKGNEIVPVLPAELSN 242 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH---HhccccccCchhhhccC
Confidence 7653 67999999999999999999999999999999999999999876543332220 00011112223333445
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+++...+..+|.+|-++.+...+
T Consensus 243 ~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 243 PLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred chhhhhhHHHhcCccccCchHHhhhh
Confidence 56788888888999999877776665
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-50 Score=389.20 Aligned_cols=252 Identities=27% Similarity=0.394 Sum_probs=221.8
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.++++||+|-||.||.|.+.....||||.++... ...+.|.+|+++|.+|+|+|||+++++|..++.++||||||+.|+
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS 287 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence 4678899999999999999888789999998764 345789999999999999999999999999889999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-----ccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-----YST 211 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-----~~~ 211 (488)
|.++|....+..+...+.+.++.|||+|++||++++ +|||||-..|||++++..+||+|||||+...+..- ..-
T Consensus 288 Ll~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kf 366 (468)
T KOG0197|consen 288 LLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKF 366 (468)
T ss_pred HHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCC
Confidence 999998766788999999999999999999999999 99999999999999999999999999995544321 112
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
...|.|||.+..++++.+||||||||+||||+|-...++.. +....+.+.++...+-+.|..||+++.+|+..||+
T Consensus 367 PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~----msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~ 442 (468)
T KOG0197|consen 367 PIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG----MSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWH 442 (468)
T ss_pred CceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC----CCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhh
Confidence 46799999999999999999999999999999966554333 34455566777777778889999999999999999
Q ss_pred CCCCCCCCHHHHHHHhchhhccc
Q 011349 292 YEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 292 ~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.+|++|||++.+...|+.+....
T Consensus 443 ~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 443 EDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred CCcccCCCHHHHHHHHHHhhhcc
Confidence 99999999999999988876643
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-51 Score=378.01 Aligned_cols=249 Identities=20% Similarity=0.232 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC-------hHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD-------SRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
+.|.+.+.||+|+||.|-+|. ..+|+.||||+++...... ...+.+|+++|++|+|||||+++++|...+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 446677889999999999999 6789999999998654222 23467999999999999999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeeccCCCccc
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKN 202 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~ 202 (488)
|+||||++||.|.+.+. .++.+.+....-++.|++.|+.|||+.| |+||||||+|||+..+ ..+||+|||+|+.
T Consensus 252 YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred EEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEecccchhhc
Confidence 99999999999999997 5677888889999999999999999999 9999999999999755 7899999999998
Q ss_pred CCCC---CccccccCCCCccccccCCc---ccCCceEeehHHHHHHhhCCCCCCcchhhh-hhccccccccccccCCCCC
Q 011349 203 SRDG---KSYSTNLAFTPPEYLRTGRV---IPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 203 ~~~~---~~~~~t~~y~aPE~~~~~~~---~~~sDv~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 275 (488)
.... .+.+|||.|.|||++.+..+ ..+.|+||+||+||-+++|.+||.+...+. ...+...... ...+..-
T Consensus 329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y--~f~p~~w 406 (475)
T KOG0615|consen 329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRY--AFGPLQW 406 (475)
T ss_pred cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcc--cccChhh
Confidence 8654 47899999999999987543 347899999999999999999997764333 1111110000 0111122
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
..++.+..+||.+||..||++|||+.++|+|-
T Consensus 407 ~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hp 438 (475)
T KOG0615|consen 407 DRISEEALDLINWMLVVDPENRPSADEALNHP 438 (475)
T ss_pred hhhhHHHHHHHHHhhEeCcccCcCHHHHhcCh
Confidence 34678899999999999999999999999983
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-51 Score=362.82 Aligned_cols=248 Identities=19% Similarity=0.265 Sum_probs=206.5
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCccccc-ceecCCe-eeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIG-CCCEGEE-RLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~-~~~~~~~-~~lv~ 129 (488)
.+.|+++||+|+||.||++. ..+|..||.|.++-..... .+.+..|+.+|++|+|||||++++ .+..+.. ++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 45788899999999999999 7789999999998554332 457899999999999999999999 4444444 89999
Q ss_pred ecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 130 EFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSK---GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 130 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~---~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
|||.+|+|...|++. ..+.+++..+|+++.|++.||..+|++ +-|+||||||.||+|+.+|.+||+||||++...
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 999999999999753 557899999999999999999999993 338999999999999999999999999999887
Q ss_pred CCC----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC-hhhH
Q 011349 205 DGK----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS-NDDG 279 (488)
Q Consensus 205 ~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 279 (488)
... +.+|||.||+||.+.+.+|+++|||||+||++|||+.-.+||.+........ .+.+.--++.| ...+
T Consensus 180 s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~-----KI~qgd~~~~p~~~YS 254 (375)
T KOG0591|consen 180 SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCK-----KIEQGDYPPLPDEHYS 254 (375)
T ss_pred chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHH-----HHHcCCCCCCcHHHhh
Confidence 654 5689999999999999999999999999999999999999998763222211 11122122233 4567
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.++..||..|+..||+.||+.-.++..+
T Consensus 255 ~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 255 TDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred hHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 8999999999999999999965555443
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-50 Score=387.24 Aligned_cols=245 Identities=18% Similarity=0.205 Sum_probs=212.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|...+.||+|+|+.||+++. ++|..||+|++.+.. ....+.+.+||++.++|+|||||+++++|.+.+++|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 3467777889999999999995 899999999997643 233567999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
|+|++++|..+++ .+.++++.++..++.||+.||.|||+.+ |||||||..|++++++.++||+|||||......
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 9999999999887 6788999999999999999999999999 999999999999999999999999999877633
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
.+.+|||.|+|||++.....+..+||||+||++|-|++|++||........-.. +.. ..-.+|...+.+..+|
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~----Ik~--~~Y~~P~~ls~~A~dL 248 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNK----IKL--NEYSMPSHLSAEAKDL 248 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHH----HHh--cCcccccccCHHHHHH
Confidence 478999999999999988999999999999999999999999876532221111 000 1112445667889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
|.++|+.+|.+|||+++|+.|=
T Consensus 249 I~~lL~~~P~~Rpsl~~vL~h~ 270 (592)
T KOG0575|consen 249 IRKLLRPNPSERPSLDEVLDHP 270 (592)
T ss_pred HHHHhcCCcccCCCHHHHhcCH
Confidence 9999999999999999999983
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-49 Score=364.39 Aligned_cols=245 Identities=22% Similarity=0.245 Sum_probs=208.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+..+++.||+|+||+||.++ .++++.+|+|++++.... +.+....|..+|.+++||.||+++..|++++.+|+|+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl 104 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL 104 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence 345788999999999999999 566999999999865432 3557889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
||+.||.|..+|. +.+.+++..+..++.+|+.||.|||+++ ||||||||+|||||.+|+++|+||||++....
T Consensus 105 d~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~ 181 (357)
T KOG0598|consen 105 DYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDA 181 (357)
T ss_pred eccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCCCc
Confidence 9999999999997 5677999999999999999999999999 99999999999999999999999999985433
Q ss_pred CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 206 GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
..+++||+.|||||++.+..++..+|.||||+++|||++|.+||.......+........ ....+...+.+.+++
T Consensus 182 t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-----~~~~p~~ls~~ardl 256 (357)
T KOG0598|consen 182 TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-----LPLPPGYLSEEARDL 256 (357)
T ss_pred cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-----CCCCCccCCHHHHHH
Confidence 346799999999999999999999999999999999999999998764333222221111 112233357889999
Q ss_pred HHHhccCCCCCCC----CHHHHHHH
Q 011349 286 ASRCLQYEPRERP----NAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rp----s~~~il~~ 306 (488)
+.++|..||++|. ++.+|-+|
T Consensus 257 l~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 257 LKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred HHHHhccCHHHhcCCCCChHHhhcC
Confidence 9999999999995 45555544
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-49 Score=350.84 Aligned_cols=248 Identities=23% Similarity=0.312 Sum_probs=200.7
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|..++++|+|+||+||+++ .++|+.||||+|..+.. .-.+-..+|+++|++++|+|+|.++.+|......+||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 46778899999999999999 55699999999976542 1234578999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-C---C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-G---K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-~---~ 207 (488)
|+. ++.+.|.+ ....++...+.+++.|++.|+.|+|+++ +|||||||+|||++.+|.+||||||+|+.... + +
T Consensus 83 ~dh-TvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT 159 (396)
T KOG0593|consen 83 CDH-TVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT 159 (396)
T ss_pred cch-HHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchhh
Confidence 985 55555654 3345899999999999999999999999 99999999999999999999999999998763 3 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh--------------------cccccccc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR--------------------GKNFLMLM 266 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~--------------------~~~~~~~~ 266 (488)
.+..|..|.|||.+.| .+|....||||+||++.||++|.+.||+...-... ...+..+.
T Consensus 160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~ 239 (396)
T KOG0593|consen 160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR 239 (396)
T ss_pred hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence 4577999999999988 78999999999999999999999988876321100 00000000
Q ss_pred ccc------cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DSC------LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~~------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
-+. +...+| ..+.-+.+++..||+.||.+|++.++++.|
T Consensus 240 lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 240 LPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred cCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 000 011111 234568999999999999999999999987
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-48 Score=364.63 Aligned_cols=251 Identities=22% Similarity=0.318 Sum_probs=205.5
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC--eeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE--ERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~ 132 (488)
+...+.||+|+||.||++.. ++|...|||.+........+.+.+|+.+|++++|||||+++|...... .+++.|||+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~ 98 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA 98 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence 45567789999999999994 458999999987664333677999999999999999999999855544 689999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCcccCCC------
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRD------ 205 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~------ 205 (488)
++|+|.+++.+..+ .|++..+..+..||++||.|||++| +|||||||+|||++. ++.+||+|||+++....
T Consensus 99 ~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~ 176 (313)
T KOG0198|consen 99 PGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD 176 (313)
T ss_pred CCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence 99999999986444 7999999999999999999999999 999999999999999 79999999999886652
Q ss_pred -CCccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 -GKSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 -~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.....||+.|||||++..+ ...+++|||||||++.||+||++||... . ........+......+.+|...+.+..
T Consensus 177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~--~~~~~~~~ig~~~~~P~ip~~ls~~a~ 253 (313)
T KOG0198|consen 177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-F--EEAEALLLIGREDSLPEIPDSLSDEAK 253 (313)
T ss_pred ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-c--chHHHHHHHhccCCCCCCCcccCHHHH
Confidence 2256899999999999853 3446999999999999999998877652 0 000111111111122356677889999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
+++.+|+..+|++|||+.++|.|.-...
T Consensus 254 ~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 254 DFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred HHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 9999999999999999999999965433
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-48 Score=368.05 Aligned_cols=249 Identities=19% Similarity=0.270 Sum_probs=207.9
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHH--HHHHHHHHhhcC-CCCCcccccceecCC-eeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQ--FLEEARAVGLLR-SERLVNLIGCCCEGE-ERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l~-h~niv~~~~~~~~~~-~~~lv 128 (488)
..|.++++||.|+||.||+|+ ..+|..||||+++..- ...++ -+||++.|++|+ |||||++.+++.+.+ .+|+|
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf-~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKF-YSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhh-ccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 356889999999999999999 7789999999998654 22343 478999999998 999999999999888 89999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
||||+ .+|+++++++ ++.|++..+..|+.||+.||+|+|.+| +.|||+||+|||+.....+||+|||+||.+...
T Consensus 89 fE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP 165 (538)
T KOG0661|consen 89 FEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPP 165 (538)
T ss_pred HHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCC
Confidence 99997 8999999875 788999999999999999999999999 999999999999999999999999999987654
Q ss_pred -CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhh--hhhc---------------cc------
Q 011349 207 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD--LIRG---------------KN------ 261 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~--~~~~---------------~~------ 261 (488)
+.++.|..|+|||++.. +-|+.+.||||+|||++|+.+-++.|++...- .++- ..
T Consensus 166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn 245 (538)
T KOG0661|consen 166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMN 245 (538)
T ss_pred cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhc
Confidence 45678999999998854 77999999999999999999999999875221 1100 00
Q ss_pred --cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 262 --FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 262 --~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+.......+..-++ ..+.++.+||.+|+..||.+|||+.+++++-
T Consensus 246 f~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 246 FRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred cCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 00111111111122 2678899999999999999999999999984
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-47 Score=333.23 Aligned_cols=248 Identities=22% Similarity=0.277 Sum_probs=206.3
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|..++++|+|+||+||+|+ .++|+.||||+++.....+ .....+|++.|+.++|+||+.++++|.+.+.+.||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 45677889999999999999 7789999999998765332 35789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
++ .+|+..|++ +...++..++..++.++++||+|||++. |+||||||.|+|++++|.+||+|||+++......
T Consensus 83 m~-tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 83 MP-TDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred cc-ccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 98 899998876 6678999999999999999999999999 9999999999999999999999999999876543
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----------cc------------cc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----------KN------------FL 263 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-----------~~------------~~ 263 (488)
....|..|.|||.+.| ..|+...||||.|||+.||+.|.+.+++...-.... .. +.
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 2356899999999987 679999999999999999999998777653211100 00 01
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+.... .-+.++.++.+|+..||..||.+|+++.+++++
T Consensus 240 ~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 240 QFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 011111111 222345677999999999999999999999987
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-47 Score=358.77 Aligned_cols=249 Identities=22% Similarity=0.279 Sum_probs=203.0
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 129 (488)
.+..+++||+|+||.||+|+ ..+|+.||+|++..+. ........+||.+|++|+||||+++.+...+. ..+|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 45778899999999999999 7789999999998766 33355678999999999999999999998876 6899999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
|||+ -+|..++.. ....|++.++..++.||+.||.|+|++| |+|||||.+|||||.+|.+||+|||||+.+....
T Consensus 198 eYMd-hDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~ 274 (560)
T KOG0600|consen 198 EYMD-HDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA 274 (560)
T ss_pred eccc-chhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence 9998 689888853 3457999999999999999999999999 9999999999999999999999999999765433
Q ss_pred ---ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-------c---cc-cc--cccc-cc
Q 011349 208 ---SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------G---KN-FL--MLMD-SC 269 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------~---~~-~~--~~~~-~~ 269 (488)
..+.|..|.|||.+.| ..|+.+.|+||.||||.||++|++++++...-... + .. +. .+.. ..
T Consensus 275 ~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~ 354 (560)
T KOG0600|consen 275 PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATI 354 (560)
T ss_pred ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccc
Confidence 3456899999999988 56999999999999999999999888765221100 0 00 00 0000 00
Q ss_pred cCCC--C-------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 270 LEGH--F-------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 270 ~~~~--~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+. + -...+....+|+..+|..||.+|.|+.++|.+
T Consensus 355 ~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 355 FKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 0000 0 11245778999999999999999999999986
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-46 Score=358.18 Aligned_cols=235 Identities=20% Similarity=0.314 Sum_probs=207.7
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
++=||.|+.|-||+|++++ +.||||+++.-. ..+|+-|++|+||||+.+.|+|.....+|||||||..|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl~n-etVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHN-ETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeeccC-ceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 3457999999999999855 459999986432 46788999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---CCccccccCC
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---GKSYSTNLAF 215 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---~~~~~~t~~y 215 (488)
..|+ .+++++......|..+|+.|+.|||.+. |||||||.-||||+.+..|||+|||-++...+ ..++.||..|
T Consensus 201 ~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW 277 (904)
T KOG4721|consen 201 EVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW 277 (904)
T ss_pred HHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh
Confidence 9998 6788999999999999999999999998 99999999999999999999999999886544 3578999999
Q ss_pred CCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCC
Q 011349 216 TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295 (488)
Q Consensus 216 ~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 295 (488)
||||+++..+.+.|+||||||||||||+||..|+... .....+..+-...+....|..+|+.+.-|+++||...|.
T Consensus 278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV----dssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpR 353 (904)
T KOG4721|consen 278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV----DSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPR 353 (904)
T ss_pred hCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc----chheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999886543 122333444555667778889999999999999999999
Q ss_pred CCCCHHHHHHHhc
Q 011349 296 ERPNAKSLVASLT 308 (488)
Q Consensus 296 ~Rps~~~il~~l~ 308 (488)
.||++++|+.||+
T Consensus 354 NRPSFrqil~Hld 366 (904)
T KOG4721|consen 354 NRPSFRQILLHLD 366 (904)
T ss_pred CCccHHHHHHHHh
Confidence 9999999999986
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=351.11 Aligned_cols=254 Identities=19% Similarity=0.234 Sum_probs=210.2
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCCh-HHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDS-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+-..|.+..+||.|..++||+|+ ...+..||||+++.+...+. +.+.+|+..|+.++||||++++..|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 44567888999999999999999 67789999999998776554 78999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
.||.+||+.++++..-...+++..+..|++++++||.|||.+| .||||||+.||||+++|.|||+|||.+..+...
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 9999999999998765566999999999999999999999999 999999999999999999999999976543322
Q ss_pred -----CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc----ccCCCCC
Q 011349 207 -----KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS----CLEGHFS 275 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 275 (488)
.++.||+.|||||+++. ..|+.|+||||||++.+||.+|..||.....-.+.-..+...... .......
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~ 262 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDED 262 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHh
Confidence 45688999999999654 569999999999999999999999876542211111111111110 1111111
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+..+.+++..||++||.+|||+++++++
T Consensus 263 k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 263 KKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred hhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 2245689999999999999999999999987
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=362.31 Aligned_cols=246 Identities=19% Similarity=0.287 Sum_probs=211.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..|....+||+|+.|.||.|. ..+++.||||.+........+-+.+|+.+|+..+|+|||++++.|...+.+++|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 455666789999999999999 6678899999999887666778999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
+||+|.+.+. ...+++.++..|+++++.||+|||.++ |+|||||.+|||++.+|.+||+|||++..+... .+
T Consensus 353 ~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T 428 (550)
T KOG0578|consen 353 EGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST 428 (550)
T ss_pred CCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence 9999999994 556999999999999999999999999 999999999999999999999999998876543 46
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..|||.|||||+.....|+++.||||||++++||+-|.+|+.... +......+.. .....-..+...++.+.+++.+
T Consensus 429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~-PlrAlyLIa~--ng~P~lk~~~klS~~~kdFL~~ 505 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN-PLRALYLIAT--NGTPKLKNPEKLSPELKDFLDR 505 (550)
T ss_pred ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC-hHHHHHHHhh--cCCCCcCCccccCHHHHHHHHH
Confidence 789999999999999999999999999999999999998876431 1110000000 1111223345567899999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..||++|+++.++|+|
T Consensus 506 cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 506 CLVVDVEQRASAKELLEH 523 (550)
T ss_pred HhhcchhcCCCHHHHhcC
Confidence 999999999999999998
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=359.18 Aligned_cols=245 Identities=21% Similarity=0.259 Sum_probs=209.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 128 (488)
.++.+.+.||.|+|++|++|+ .++++.||||++.+.-. ...+-+.+|-.+|.+| .||.|++|+..|.+...+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 344677888999999999999 67899999999865431 1234578899999999 799999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 205 (488)
+||+++|+|.++|. +-+.|++.....++.+|+.||.|||++| ||||||||+|||||.|++++|+|||.|+.+..
T Consensus 153 Le~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~ 229 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQK 229 (604)
T ss_pred EEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChhhc
Confidence 99999999999998 4577999999999999999999999999 99999999999999999999999999986532
Q ss_pred ------------C--CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC
Q 011349 206 ------------G--KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 206 ------------~--~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
. .+++||..|.+||++..+..++.+|+|+|||+||+|+.|.+||.+...-.. +..++. +.
T Consensus 230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli----FqkI~~--l~ 303 (604)
T KOG0592|consen 230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI----FQKIQA--LD 303 (604)
T ss_pred cccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH----HHHHHH--hc
Confidence 1 357899999999999999999999999999999999999999876522221 122221 12
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
-.++...++.+.+|+.+.|..||.+|+|.++|.+|.
T Consensus 304 y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 304 YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred ccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 346667778999999999999999999999999984
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=359.13 Aligned_cols=242 Identities=19% Similarity=0.251 Sum_probs=209.7
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+.+.||+|+||.||||+ ..+.+.||+|.+.+....+ .+.+.+|+++++.++|||||.++++|....++++|+||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 45667778999999999999 5678999999997665333 45799999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+.| +|..+|. ..+.++++++..|+.+++.||.|||+.+ |+|||+||.|||++..|++|+||||+|+......
T Consensus 83 a~g-~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt 158 (808)
T KOG0597|consen 83 AVG-DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT 158 (808)
T ss_pred hhh-hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence 985 9999997 6778999999999999999999999999 9999999999999999999999999999877654
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
+..|||.|||||...+++|+..+|+||+||++|||++|++||........-..... ++ ..+|...+..+..++.
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~---d~---v~~p~~~S~~f~nfl~ 232 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK---DP---VKPPSTASSSFVNFLQ 232 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---CC---CCCcccccHHHHHHHH
Confidence 45789999999999999999999999999999999999999876533222111111 11 1234466788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
..|.+||..|.|..+++.|
T Consensus 233 gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 233 GLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHhhcChhhcccHHHHhcC
Confidence 9999999999999999987
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-46 Score=334.58 Aligned_cols=257 Identities=19% Similarity=0.198 Sum_probs=208.3
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceec--C
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCE--G 122 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~--~ 122 (488)
...++.+++.++.+|++|+||+||+|+ ..+++.||+|+++.+.... .-.-.+||.+|.+++|||||.+-.+... -
T Consensus 70 ~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~ 149 (419)
T KOG0663|consen 70 GGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM 149 (419)
T ss_pred cCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence 345556677889999999999999999 5679999999999765221 2356899999999999999999887654 4
Q ss_pred CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
+.+|+|||||+ -+|..++... .++|...++..++.|+++|+.|||.+. |+||||||+|+|++..|.+||+|||+|+.
T Consensus 150 d~iy~VMe~~E-hDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 150 DKIYIVMEYVE-HDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred ceeeeeHHHHH-hhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhhh
Confidence 57999999998 7999999763 468999999999999999999999999 99999999999999999999999999998
Q ss_pred CCCC----CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc------------------
Q 011349 203 SRDG----KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG------------------ 259 (488)
Q Consensus 203 ~~~~----~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~------------------ 259 (488)
+... +....|..|.|||.+.| ..|+.+.|+||+|||+.||+++++.|++...-....
T Consensus 227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 7765 34567999999999988 568999999999999999999999888753211100
Q ss_pred -------cccccccccccCCCCChh-hHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 260 -------KNFLMLMDSCLEGHFSND-DGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 260 -------~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
..+.......++..+... .+..-.+|+..+|..||.+|.|+.+.|+|=
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~ 362 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE 362 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence 001111111122233322 457788999999999999999999999983
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=351.38 Aligned_cols=243 Identities=17% Similarity=0.275 Sum_probs=210.4
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
|+.+..||+|+||.||+|. ..+++.||+|++......+ .+++++|+.+|.+++++||.++|+.+..+..++++||||.
T Consensus 15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~ 94 (467)
T KOG0201|consen 15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCG 94 (467)
T ss_pred cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhc
Confidence 4555778999999999999 5679999999998766444 5789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
||++.+.+. .+..+++..+.-++++++.||.|||.++ .+|||||+.|||+..+|.+||+|||++...... .++
T Consensus 95 gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tf 171 (467)
T KOG0201|consen 95 GGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTF 171 (467)
T ss_pred Ccchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhccccc
Confidence 999999996 4455589999999999999999999999 999999999999999999999999998765432 578
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.||+.|||||++.+..|+.++||||||++.+||++|.+|+... ......-++.....+.....+++.+.+++..|
T Consensus 172 vGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~-----hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~C 246 (467)
T KOG0201|consen 172 VGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL-----HPMRVLFLIPKSAPPRLDGDFSPPFKEFVEAC 246 (467)
T ss_pred cccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCccc-----CcceEEEeccCCCCCccccccCHHHHHHHHHH
Confidence 9999999999999889999999999999999999999876442 11233333444444444456778899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|.+||+.||++.++++|
T Consensus 247 L~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 247 LDKNPEFRPSAKELLKH 263 (467)
T ss_pred hhcCcccCcCHHHHhhh
Confidence 99999999999999987
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-46 Score=332.83 Aligned_cols=234 Identities=18% Similarity=0.216 Sum_probs=204.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
++++++.||.|+||.|.+++ ..+|..+|+|+++....-. .+...+|..+|+.+.||+++++++.|.+.+.+|+|||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme 124 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME 124 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence 44678899999999999999 5568999999998665333 3457789999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-cc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-SY 209 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-~~ 209 (488)
|++||.|..+++ +.++++++.+..++.||+.||.|||+.+ |++|||||+|||+|.+|.+||+|||.|+...... +.
T Consensus 125 yv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~Tl 201 (355)
T KOG0616|consen 125 YVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTL 201 (355)
T ss_pred ccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEEEe
Confidence 999999999997 5678999999999999999999999999 9999999999999999999999999999876653 67
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+|||.|+|||.++...++.++|.|||||++|||+.|.+||..+....+- ..++... -.+|...+.++.+|+..+
T Consensus 202 CGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY----~KI~~~~--v~fP~~fs~~~kdLl~~L 275 (355)
T KOG0616|consen 202 CGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIY----EKILEGK--VKFPSYFSSDAKDLLKKL 275 (355)
T ss_pred cCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHH----HHHHhCc--ccCCcccCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999876442211 1122211 246667788999999999
Q ss_pred ccCCCCCC
Q 011349 290 LQYEPRER 297 (488)
Q Consensus 290 l~~dp~~R 297 (488)
|+.|-.+|
T Consensus 276 L~vD~t~R 283 (355)
T KOG0616|consen 276 LQVDLTKR 283 (355)
T ss_pred HhhhhHhh
Confidence 99999999
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=358.45 Aligned_cols=245 Identities=21% Similarity=0.237 Sum_probs=208.2
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC----C-CChHHHHHHHHHHhhcC-CCCCcccccceecCCee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA----W-PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEER 125 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 125 (488)
...|.+.+.||+|+||.|++|. ..+++.||||++.... . ...+.+.+|+.+++.++ ||||++++.++.....+
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 4567888999999999999998 5578999999877642 1 23456778999999998 99999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSR 204 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 204 (488)
++||||+.||+|.+++.. .+++.+..+..++.|++.|++|||++| |+||||||+|||++.+ +++||+|||++....
T Consensus 96 ~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred EEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 999999999999999974 678999999999999999999999999 9999999999999999 999999999998772
Q ss_pred -C---CCccccccCCCCccccccCC-cc-cCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 205 -D---GKSYSTNLAFTPPEYLRTGR-VI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 205 -~---~~~~~~t~~y~aPE~~~~~~-~~-~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
. ..+.+||+.|+|||++.+.. |+ .++||||+||+||-|++|..||........... +... .-.+|...
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k----i~~~--~~~~p~~~ 246 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK----IRKG--EFKIPSYL 246 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH----HhcC--CccCCCCc
Confidence 2 34779999999999999877 75 799999999999999999999986433322221 1111 11234444
Q ss_pred -HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 279 -GTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 279 -~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
++++..|+.+||..||.+|+|+.+|+.+
T Consensus 247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 247 LSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 7889999999999999999999999955
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-46 Score=370.13 Aligned_cols=324 Identities=19% Similarity=0.257 Sum_probs=265.0
Q ss_pred ccCHHHHHHHhcCCCc------ccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCCC-hHHHHHHHHHHhhcC
Q 011349 40 EFNLDQLRAATSGFCA------DNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWPD-SRQFLEEARAVGLLR 108 (488)
Q Consensus 40 ~~~~~~~~~~~~~~~~------~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~ 108 (488)
.+++++--.|...|.. -.|-+.||.|.||.|++|.++- ...||||.++...... ..+|+.|+.||.+++
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 4667664444444432 2344678999999999999543 4569999999765443 458999999999999
Q ss_pred CCCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 109 SERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 109 h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
||||++|.|+.......+||+|||++|+|+.+|+.+. +.|++.+...++++|+.|+.||-+.+ +|||||-..|||++.
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVNs 766 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVNS 766 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeecc
Confidence 9999999999999999999999999999999998754 55999999999999999999999999 999999999999999
Q ss_pred CCCCeeccCCCcccCCCCCcc----c-c--ccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcc
Q 011349 189 DGNPRLSCFGLMKNSRDGKSY----S-T--NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGK 260 (488)
Q Consensus 189 ~~~~kl~Dfgla~~~~~~~~~----~-~--t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~ 260 (488)
+...|++||||++...+.... . | ..+|.|||.+...++|.+||||||||++||.++ |..|++. +.++
T Consensus 767 nLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd-----mSNQ 841 (996)
T KOG0196|consen 767 NLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-----MSNQ 841 (996)
T ss_pred ceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc-----cchH
Confidence 999999999999977654311 1 1 368999999999999999999999999999776 6677665 3445
Q ss_pred ccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCCCCccCCCC-----CCCCCCCccc
Q 011349 261 NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIP-----HGTASTKQTI 335 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 335 (488)
+....+....+.+.|.++|..|.+|+..||++|-.+||.+.+|+..|.++..............+ -...+.+...
T Consensus 842 dVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld~~~~~~~ 921 (996)
T KOG0196|consen 842 DVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLDRSGSDFT 921 (996)
T ss_pred HHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccCCCCCCCc
Confidence 55556666777788899999999999999999999999999999999998876543332221111 1122344456
Q ss_pred ccCcchhhhhchhhhHHHHHHHhhcccCchhhhhh
Q 011349 336 TLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANE 370 (488)
Q Consensus 336 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 370 (488)
+..++++|...|++....+.|...||.+.+.+.+.
T Consensus 922 ~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~~V~q~ 956 (996)
T KOG0196|consen 922 PFRSVGDWLEAIKMGRYKEHFAAAGYTSFEDVAQM 956 (996)
T ss_pred ccCCHHHHHHHhhhhHHHHHHHhcCcccHHHHHhh
Confidence 67788999999999999999999999999866543
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-45 Score=357.98 Aligned_cols=254 Identities=22% Similarity=0.328 Sum_probs=202.1
Q ss_pred cccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecC-Cee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEG-EER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~~~ 125 (488)
.+++.+.||+|+||.||+|.+ .+++.||||+++..... ....+.+|+.++..+ +||||+++++++... ...
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL 87 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence 357788899999999999973 23567999999754322 245789999999999 899999999988764 458
Q ss_pred eEEEecCCCCChhhhhccCC------------------------------------------------------------
Q 011349 126 LLVAEFMPNETLSKHLFHWE------------------------------------------------------------ 145 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------ 145 (488)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (338)
T cd05102 88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW 167 (338)
T ss_pred EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence 99999999999999886421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC------ccccccCCCCcc
Q 011349 146 NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPE 219 (488)
Q Consensus 146 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE 219 (488)
..++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...+++.|+|||
T Consensus 168 ~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 246 (338)
T cd05102 168 KSPLTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE 246 (338)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence 134888999999999999999999999 9999999999999999999999999998653221 233467899999
Q ss_pred ccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC
Q 011349 220 YLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298 (488)
Q Consensus 220 ~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 298 (488)
++.+..++.++|||||||++|||++ |..||........ +...+........+...++.+.+|+.+||+.||.+||
T Consensus 247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP 322 (338)
T cd05102 247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE----FCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERP 322 (338)
T ss_pred HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH----HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence 9998889999999999999999997 8888765321110 0011111111123345567899999999999999999
Q ss_pred CHHHHHHHhchhhcc
Q 011349 299 NAKSLVASLTPLQKE 313 (488)
Q Consensus 299 s~~~il~~l~~~~~~ 313 (488)
|+.++++.|+.+..+
T Consensus 323 s~~el~~~l~~~~~~ 337 (338)
T cd05102 323 TFSALVEILGDLLQE 337 (338)
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-45 Score=356.13 Aligned_cols=245 Identities=18% Similarity=0.255 Sum_probs=214.6
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC-C--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA-W--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
....+.+.+.||.|+.|.|-+|+ ..+|+.+|||++.... . .....+.+|+-+|+-+.||||+++|+++.+..++|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 35677888999999999999999 6789999999997652 1 124568999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
|.||++||.|.+++. ..+++++.++.++++||+.|+.|+|..+ |+||||||+|+|||..+++||+|||+|.....+
T Consensus 90 vlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 999999999999998 6788999999999999999999999999 999999999999999999999999999876655
Q ss_pred --CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC--CCChhhHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGTE 281 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 281 (488)
.+.+|++.|.+||+++|.+| +.++||||.|||||.|+||+.||.++.... ++....++ ..|..++.+
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~--------LLlKV~~G~f~MPs~Is~e 238 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV--------LLLKVQRGVFEMPSNISSE 238 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHH--------HHHHHHcCcccCCCcCCHH
Confidence 37899999999999999988 569999999999999999999987653322 22222222 245667899
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.++|+.+|+..||++|.|+++|++|-
T Consensus 239 aQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 239 AQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHHHHHHHhccCccccccHHHHhhCc
Confidence 99999999999999999999999994
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=344.94 Aligned_cols=261 Identities=15% Similarity=0.234 Sum_probs=211.1
Q ss_pred CCCccccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCC
Q 011349 35 LPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSER 111 (488)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~n 111 (488)
+...+.++.+++...+ ...+|+|++|.||+|.+ +|+.||||.++...... .+.+.+|+.+|++++|||
T Consensus 9 ~~~~~~i~~~~i~~~~--------~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 79 (283)
T PHA02988 9 INDIKCIESDDIDKYT--------SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNN 79 (283)
T ss_pred cCcceecCHHHcCCCC--------CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCC
Confidence 4455666777763221 12469999999999998 78889999998654333 356789999999999999
Q ss_pred Ccccccceec----CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceee
Q 011349 112 LVNLIGCCCE----GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILF 186 (488)
Q Consensus 112 iv~~~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill 186 (488)
|+++++++.+ ....++||||++||+|.+++. ....+++...+.++.+++.||.|||+. + ++||||||+|||+
T Consensus 80 Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill 156 (283)
T PHA02988 80 ILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLV 156 (283)
T ss_pred EEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEE
Confidence 9999999876 346899999999999999997 345799999999999999999999985 6 8999999999999
Q ss_pred cCCCCCeeccCCCcccCCCC-CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc
Q 011349 187 DQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL 263 (488)
Q Consensus 187 ~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 263 (488)
++++.+||+|||+++..... ....+++.|+|||.+.+ ..++.++|||||||++|||+||+.||......... .
T Consensus 157 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~----~ 232 (283)
T PHA02988 157 TENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY----D 232 (283)
T ss_pred CCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH----H
Confidence 99999999999998865433 24467899999999976 67899999999999999999999988654222111 1
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
.+.........+..++..+.+++.+||+.||++|||+.+++..|+.+.
T Consensus 233 ~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 233 LIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 111111222344456789999999999999999999999999998765
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-46 Score=373.13 Aligned_cols=253 Identities=25% Similarity=0.364 Sum_probs=213.6
Q ss_pred cccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 57 NIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.++++||+|+||.||+|... ....||||.++..... ...+|++|+++|..++|||||+++|+|..++..++|+
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvF 568 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVF 568 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEE
Confidence 46788999999999999842 2457999999987755 4678999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC--------CC----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 130 EFMPNETLSKHLFHW--------EN----QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 130 e~~~~gsL~~~l~~~--------~~----~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
|||..|+|.++|... .+ .+|+..+.+.|+.|||.|+.||-++. +|||||-.+|+||+++..|||+||
T Consensus 569 EYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIsDf 647 (774)
T KOG1026|consen 569 EYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKISDF 647 (774)
T ss_pred EecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEeccc
Confidence 999999999999742 12 23899999999999999999999998 999999999999999999999999
Q ss_pred CCcccCCCCCcc------ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccccccc
Q 011349 198 GLMKNSRDGKSY------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 198 gla~~~~~~~~~------~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
||++.....+-+ .-.++|||||.+..++||.+||||||||+|||+++ |+.|+.+.. .+...+.+....
T Consensus 648 GLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS-----n~EVIe~i~~g~ 722 (774)
T KOG1026|consen 648 GLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS-----NQEVIECIRAGQ 722 (774)
T ss_pred ccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc-----hHHHHHHHHcCC
Confidence 999977655432 22579999999999999999999999999999998 555655432 222222222222
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
--..|..+|.++.+|+..||+.+|.+||++.+|-..|+.+.....
T Consensus 723 lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 723 LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 245677899999999999999999999999999999988776543
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-45 Score=353.52 Aligned_cols=249 Identities=22% Similarity=0.342 Sum_probs=205.9
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
..+...||+|+||+||+|.| .|. ||||+++...... .+.|.+|+.++++-+|.||+-+.|+|..++. .||+.+|+
T Consensus 394 v~l~~rIGsGsFGtV~Rg~w-hGd-VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCe 470 (678)
T KOG0193|consen 394 VLLGERIGSGSFGTVYRGRW-HGD-VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCE 470 (678)
T ss_pred hhccceeccccccceeeccc-ccc-eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhcc
Confidence 35667899999999999997 444 9999999876554 4579999999999999999999999987776 99999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC------CC
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------GK 207 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~~ 207 (488)
|.+|+.+|+- ....|...+.+.|+.||+.|+.|||.++ |||||||..||++.+++.|||+||||+..... ..
T Consensus 471 GsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~ 548 (678)
T KOG0193|consen 471 GSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLE 548 (678)
T ss_pred Cchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeeccccccC
Confidence 9999999965 3456999999999999999999999999 99999999999999999999999999864321 12
Q ss_pred ccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC---CCChhhHHH
Q 011349 208 SYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG---HFSNDDGTE 281 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 281 (488)
...|...|||||+++. .+|++.|||||||||+|||+||..|+.....+ ..+..+-...+.. .....++++
T Consensus 549 qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d----qIifmVGrG~l~pd~s~~~s~~pk~ 624 (678)
T KOG0193|consen 549 QPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD----QIIFMVGRGYLMPDLSKIRSNCPKA 624 (678)
T ss_pred CCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh----heEEEecccccCccchhhhccCHHH
Confidence 3456789999999975 56899999999999999999999887643222 1122221111111 123457889
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+|+..||..++++||.+.+|+..|+.+.+.
T Consensus 625 mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 625 MKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred HHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 99999999999999999999999988887764
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-45 Score=347.20 Aligned_cols=249 Identities=19% Similarity=0.158 Sum_probs=205.7
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+.+++.+++.||+|+||.||+|+ ..+|..+|+|+++++... ..+.+..|-.+|....+|+||+++-.|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 44566889999999999999999 567999999999876533 34567889999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++||++..+|. ..+.|++..+..++.+++.||..+|+.| +|||||||+|+|||..|++||+||||+.....
T Consensus 219 iMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 999999999999997 5678999999999999999999999999 99999999999999999999999999742110
Q ss_pred -----------------------C--------------------------CccccccCCCCccccccCCcccCCceEeeh
Q 011349 206 -----------------------G--------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFG 236 (488)
Q Consensus 206 -----------------------~--------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG 236 (488)
. .+.+|||.|||||++.+..|+..+|.||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0 023679999999999999999999999999
Q ss_pred HHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC---CHHHHHHH
Q 011349 237 TLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP---NAKSLVAS 306 (488)
Q Consensus 237 ~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~il~~ 306 (488)
||+||||.|-+||........-... ..+...+.-+.....+++..+||.+|+. ||++|. .++||-+|
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI--~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKI--VNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHH--HHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence 9999999999999776443221110 0111112222222345889999999998 999995 57787776
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=373.15 Aligned_cols=255 Identities=18% Similarity=0.215 Sum_probs=202.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.++++||+|+||.||+|.. .+|+.||||++....... .+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4568889999999999999994 468999999997543222 356899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 130 EFMPNETLSKHLFHW---------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 130 e~~~~gsL~~~l~~~---------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
||++||+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCcc
Confidence 999999999988531 1234667788999999999999999999 999999999999999999999999999
Q ss_pred ccCCC----------------------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh
Q 011349 201 KNSRD----------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR 258 (488)
Q Consensus 201 ~~~~~----------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~ 258 (488)
+.... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 76511 01235899999999999999999999999999999999999988653221111
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC-CHHHHHHHhchhhc
Q 011349 259 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP-NAKSLVASLTPLQK 312 (488)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~il~~l~~~~~ 312 (488)
.. .....+. ........++.+.+++.+||..||++|| +++++++.|+....
T Consensus 241 ~~--~~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 241 YR--DVILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hh--hhccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 10 0011110 0011124567899999999999999994 67777777766543
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=339.68 Aligned_cols=252 Identities=17% Similarity=0.184 Sum_probs=206.9
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC--------------CChHHHHHHHHHHhhcCCCCCccccc
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW--------------PDSRQFLEEARAVGLLRSERLVNLIG 117 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~~~~ 117 (488)
.+.|.++++||+|.||.|-+|. ..+++.||||++.+... ...+...+|+.+|++++|||||+++.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 4567899999999999999999 55689999999964321 12357899999999999999999999
Q ss_pred ceecC--CeeeEEEecCCCCChhhhhccCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCee
Q 011349 118 CCCEG--EERLLVAEFMPNETLSKHLFHWENQP-MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194 (488)
Q Consensus 118 ~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 194 (488)
+..+. +.+|||+|||..|.+...- ...+ +++.++++++++++.||.|||.+| ||||||||+|+||+++|++||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCcEEe
Confidence 98764 5799999999999886543 3445 999999999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC---------CccccccCCCCccccccCC----cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc
Q 011349 195 SCFGLMKNSRDG---------KSYSTNLAFTPPEYLRTGR----VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261 (488)
Q Consensus 195 ~Dfgla~~~~~~---------~~~~~t~~y~aPE~~~~~~----~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~ 261 (488)
+|||.+.....+ ....|||.|+|||.+.++. .+.+.||||+||+||.|+.|+.||.+... ...
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~----~~l 327 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE----LEL 327 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH----HHH
Confidence 999998754222 1357899999999998733 35689999999999999999999977632 223
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 262 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
+..++...+.-+..++....+.+||.++|.+||+.|.+..+|..|......
T Consensus 328 ~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 328 FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 334444443333333567889999999999999999999999999765544
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=347.29 Aligned_cols=247 Identities=18% Similarity=0.179 Sum_probs=216.9
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCe-eeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEE-RLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~lv~ 129 (488)
+.|..++.+|+|+||.++.++ ..+++.|++|.+....... .+...+|+.++++++|||||.+.+.|..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 456788899999999999999 4467889999998765433 3468999999999999999999999999888 99999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
+||+||+|.+.|.+.++..++++.+..|+.|++.|+.|||++. |+|||||++||+++.++.|||+|||+|+...+..
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 9999999999998877788999999999999999999999888 9999999999999999999999999999887653
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
+..||+.||+||.+.+.+|+.|+|||||||++|||++-+++|................ -.+.+...+.++..+
T Consensus 163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-----~~Plp~~ys~el~~l 237 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-----YSPLPSMYSSELRSL 237 (426)
T ss_pred hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-----CCCCCccccHHHHHH
Confidence 5689999999999999999999999999999999999999887654444333333322 234566678899999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+..||..+|+.||++.++|.+
T Consensus 238 v~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 238 VKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHhhcCCccCCCHHHHhhC
Confidence 999999999999999999987
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-44 Score=349.35 Aligned_cols=246 Identities=17% Similarity=0.183 Sum_probs=205.8
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++.+.+++.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 45678889999999999999995 468899999987542 12345688999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-C
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-K 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 207 (488)
|||++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 97 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 97 LEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred EcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence 99999999999987 4457899999999999999999999999 999999999999999999999999999876443 3
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||+||..||.......... .+... ...++...+..+.+|+.
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~ 247 (329)
T PTZ00263 174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYE----KILAG--RLKFPNWFDGRARDLVK 247 (329)
T ss_pred eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHH----HHhcC--CcCCCCCCCHHHHHHHH
Confidence 4578999999999999889999999999999999999999886542211111 11111 11233445678999999
Q ss_pred HhccCCCCCCCC-----HHHHHHHh
Q 011349 288 RCLQYEPRERPN-----AKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps-----~~~il~~l 307 (488)
+||+.||.+||+ +.+++.|-
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 999999999986 78888873
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=353.10 Aligned_cols=255 Identities=23% Similarity=0.348 Sum_probs=212.5
Q ss_pred cccccCCCCCCceEEEEEeCC--C---cEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE--D---RWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~--~---~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.++||+|+||.||+|.+.. + ..||||..+... .....+|.+|+++|++++|||||+++|++.....++||
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 345789999999999999533 2 238999988533 22356899999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
||+|.||+|.++|.+. ...++..+++.++.+.+.||+|||+++ +|||||-.+|+|++.++.+||+|||+++......
T Consensus 240 mEl~~gGsL~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~ 317 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVM 317 (474)
T ss_pred EEecCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceee
Confidence 9999999999999853 236999999999999999999999999 9999999999999999999999999987654211
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...-...|+|||.+..+.+++++|||||||++||+++ |..|+++........ .+.....+...+...|.++.
T Consensus 318 ~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~----kI~~~~~r~~~~~~~p~~~~ 393 (474)
T KOG0194|consen 318 KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKA----KIVKNGYRMPIPSKTPKELA 393 (474)
T ss_pred ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHH----HHHhcCccCCCCCCCHHHHH
Confidence 1123578999999999999999999999999999999 777777654332222 12133344455667789999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
.++.+||..+|++||||.++.+.|+.+......+
T Consensus 394 ~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 394 KVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred HHHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999998876554
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-44 Score=350.43 Aligned_cols=237 Identities=19% Similarity=0.224 Sum_probs=199.5
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.||+|+||.||+|.. .+|+.||||+++.... .....+.+|+.++++++||||+++++++..++..++||||++||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 579999999999994 5789999999975421 223467889999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCccccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYSTN 212 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t 212 (488)
|.+++. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 82 LFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence 999886 4567999999999999999999999999 99999999999999999999999999875422 2245689
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 292 (488)
+.|+|||++.+..++.++|||||||++|||+||+.||............. .. ...++...++++.+++.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~----~~--~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----ME--EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH----cC--CCCCCCCCCHHHHHHHHHHccC
Confidence 99999999999899999999999999999999999886543222111111 00 1233445678899999999999
Q ss_pred CCCCCC-----CHHHHHHH
Q 011349 293 EPRERP-----NAKSLVAS 306 (488)
Q Consensus 293 dp~~Rp-----s~~~il~~ 306 (488)
||++|| ++.++++|
T Consensus 233 dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 233 DPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CHHHcCCCCCCCHHHHHcC
Confidence 999999 89999887
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=333.31 Aligned_cols=243 Identities=18% Similarity=0.263 Sum_probs=212.5
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChH---HHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSR---QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+.+.||+|+||.|-+|. +..|+.||||.++.+...+.+ .+.+|+++|+.|+||||+.++.+|...+.+.||||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 45778889999999999999 678999999999988766654 57899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|..+|.|++++. ..+.|++.++..+++||..|+.|+|.++ ++|||||.+|||+|+++++||+||||+-.+.+..
T Consensus 134 YaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLq 210 (668)
T KOG0611|consen 134 YASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQ 210 (668)
T ss_pred ecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHHH
Confidence 999999999998 5677999999999999999999999999 9999999999999999999999999998876654
Q ss_pred ccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC-ChhhHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF-SNDDGTELVRL 285 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l 285 (488)
+++|++.|.+||.+.|.+| .+..|-|||||+||-|+.|..||.+.... .++.++.++.+ .+..|....-|
T Consensus 211 TFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk--------~lvrQIs~GaYrEP~~PSdA~gL 282 (668)
T KOG0611|consen 211 TFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK--------RLVRQISRGAYREPETPSDASGL 282 (668)
T ss_pred HhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH--------HHHHHhhcccccCCCCCchHHHH
Confidence 7899999999999999887 57899999999999999999998765322 22222222222 12335678899
Q ss_pred HHHhccCCCCCCCCHHHHHHHhc
Q 011349 286 ASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l~ 308 (488)
|.+||..+|++|.|+.+|..|-.
T Consensus 283 IRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 283 IRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred HHHHHhcCcccchhHHHHhhhhe
Confidence 99999999999999999999854
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-45 Score=335.42 Aligned_cols=242 Identities=24% Similarity=0.292 Sum_probs=196.5
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC-----eeeEEEecC
Q 011349 59 VSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE-----ERLLVAEFM 132 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~ 132 (488)
.+.+|+|+||.||+|. ..++..||||+...+. +--.+|+++|+.++|||||++..+|.... ...+|||||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 3456999999999999 5567899999986544 34468999999999999999998886532 356899999
Q ss_pred CCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCCCCC--
Q 011349 133 PNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~~-- 207 (488)
+ .+|.+.+++. .+..++.-.+.-+..||++||.|||+.+ |+||||||+|+|+|.+ |.+||||||.|+....+.
T Consensus 105 P-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn 182 (364)
T KOG0658|consen 105 P-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN 182 (364)
T ss_pred h-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc
Confidence 8 7999998742 3567888899999999999999999999 9999999999999965 999999999999876543
Q ss_pred -ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-----------------------cccc
Q 011349 208 -SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----------------------GKNF 262 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-----------------------~~~~ 262 (488)
++..|..|+|||.+.| ..|+.+.||||.|||+.||+-|++.|++....... ...+
T Consensus 183 iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~ 262 (364)
T KOG0658|consen 183 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKF 262 (364)
T ss_pred eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccC
Confidence 5677999999999988 56999999999999999999999999876321110 0011
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.++....+...+....++++.+|+.++|..+|.+|.++.+++.|
T Consensus 263 p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 263 PQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11111112122445667899999999999999999999999987
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-44 Score=344.09 Aligned_cols=247 Identities=17% Similarity=0.210 Sum_probs=202.4
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+++.||+|+||.||+|. ..+|+.||||.+...... ....+.+|+.++++++|+||+++++++.+++..++||||+
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05631 3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIM 82 (285)
T ss_pred eEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEec
Confidence 567788999999999999 467999999998754322 2346789999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Ccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSY 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 209 (488)
++|+|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.++|+|||++...... ...
T Consensus 83 ~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05631 83 NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR 161 (285)
T ss_pred CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCC
Confidence 9999998886544557999999999999999999999999 999999999999999999999999999865432 234
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .....+. .....++...+..+.+|+.+|
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~-~~~~~~~-~~~~~~~~~~s~~~~~li~~~ 239 (285)
T cd05631 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE-EVDRRVK-EDQEEYSEKFSEDAKSICRML 239 (285)
T ss_pred CCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH-HHHHHhh-cccccCCccCCHHHHHHHHHH
Confidence 67999999999999999999999999999999999999886532111000 0000010 111223445677899999999
Q ss_pred ccCCCCCCCC-----HHHHHHH
Q 011349 290 LQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps-----~~~il~~ 306 (488)
|..||.+||+ ++++++|
T Consensus 240 l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 240 LTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred hhcCHHHhcCCCCCCHHHHhcC
Confidence 9999999997 8888886
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=332.18 Aligned_cols=245 Identities=20% Similarity=0.285 Sum_probs=200.3
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEcc--CCCCCChHHHHHHHHHHhhcCCCCCcccccceec-----CCeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFN--RSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE-----GEERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~lv 128 (488)
..++.||+|+||.|..+. ..+|..||||++. -....+.++..+|+++|+.++|+||+.+++++.. -..+|+|
T Consensus 25 ~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV 104 (359)
T KOG0660|consen 25 VLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLV 104 (359)
T ss_pred cccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEe
Confidence 346889999999999999 5679999999997 3444456788999999999999999999998865 3468999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
+|+|+ .+|...|+ .+..|+...+..++.||++||.|+|+.+ |+||||||+|+|++.+..+||||||+|+.....
T Consensus 105 ~elMe-tDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~ 180 (359)
T KOG0660|consen 105 FELME-TDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFE 180 (359)
T ss_pred hhHHh-hHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccCc
Confidence 99994 89999996 4556999999999999999999999999 999999999999999999999999999987431
Q ss_pred ----CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhh-------------------hhhcccc
Q 011349 207 ----KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-------------------LIRGKNF 262 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~-------------------~~~~~~~ 262 (488)
+.+..|..|.|||.+.. ..||.+.||||.|||+.||++|++.|++...- .+.....
T Consensus 181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a 260 (359)
T KOG0660|consen 181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA 260 (359)
T ss_pred ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence 35567999999998855 77999999999999999999999999875210 0010001
Q ss_pred cccc---ccccCC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLM---DSCLEG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~---~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+ ....+. .++ ..++...+|+.+||..||.+|+|++++|+|
T Consensus 261 r~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 261 RPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111 111111 122 456789999999999999999999999998
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-44 Score=352.30 Aligned_cols=242 Identities=20% Similarity=0.320 Sum_probs=206.8
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.++++.||+|+||+|+++. ..+++.+|||+++++.. .+.+....|.+++... +||.+++++.+|.+.+++|+||
T Consensus 369 ~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvm 448 (694)
T KOG0694|consen 369 DFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVM 448 (694)
T ss_pred ceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEE
Confidence 44788999999999999999 45688999999998753 3456788899999888 4999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC----C
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----D 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~ 205 (488)
||+.||++..++ ....|++..+..++..|+.||.|||+++ |||||||.+|||||.+|++||+|||+++... .
T Consensus 449 ey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~ 524 (694)
T KOG0694|consen 449 EYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDR 524 (694)
T ss_pred EecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCCCCCc
Confidence 999999965544 4567999999999999999999999999 9999999999999999999999999999654 3
Q ss_pred CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 206 GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
..+++|||.|||||++.+..|+.++|.|||||+||||+.|..||+++..+..-.. ++.. ...+|..++.+...+
T Consensus 525 TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fds----I~~d--~~~yP~~ls~ea~~i 598 (694)
T KOG0694|consen 525 TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDS----IVND--EVRYPRFLSKEAIAI 598 (694)
T ss_pred cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH----HhcC--CCCCCCcccHHHHHH
Confidence 4578999999999999999999999999999999999999999997644332221 1111 123566778999999
Q ss_pred HHHhccCCCCCCCC-----HHHHHHH
Q 011349 286 ASRCLQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps-----~~~il~~ 306 (488)
+.++|.++|++|.. +.+|..|
T Consensus 599 l~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 599 MRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred HHHHhccCcccccCCCCCCchhhhhC
Confidence 99999999999964 4556554
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=345.71 Aligned_cols=244 Identities=17% Similarity=0.172 Sum_probs=204.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 457788999999999999995 4689999999865432 224568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Ccc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSY 209 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 209 (488)
|+++|+|.+++. ..+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 82 YVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 999999999987 4457999999999999999999999999 999999999999999999999999999866443 245
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.||+.|+|||++.+..++.++|||||||++|+|+||+.||.......... .+... ...++...+..+.+++.+|
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~----~i~~~--~~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE----KILAG--KLEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHHhC--CcCCCccCCHHHHHHHHHH
Confidence 68999999999998889999999999999999999999886543221111 11111 1123444567899999999
Q ss_pred ccCCCCCCCC-----HHHHHHHh
Q 011349 290 LQYEPRERPN-----AKSLVASL 307 (488)
Q Consensus 290 l~~dp~~Rps-----~~~il~~l 307 (488)
|+.||.+||+ +.+++.|-
T Consensus 233 l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred cCCCHHHccCCccCCHHHHhcCc
Confidence 9999999995 99999873
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=346.22 Aligned_cols=250 Identities=19% Similarity=0.186 Sum_probs=205.3
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|... +++.||||+++... ......+.+|+.++..++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 4678899999999999999954 58899999997542 1234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-CCcc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-GKSY 209 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-~~~~ 209 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ....
T Consensus 82 ~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 82 YVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 999999999996 4457899999999999999999999999 99999999999999999999999999986544 2355
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc--cccccccccccCCCCChhhHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG--KNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
.||+.|+|||++.+..++.++|||||||++|||++|..||.......... ......+............+.++.+++.
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~ 238 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLIT 238 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHH
Confidence 78999999999999899999999999999999999999886543221110 0001111111110011234678999999
Q ss_pred HhccCCCCCCCCHHHHHHHh
Q 011349 288 RCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l 307 (488)
+||..+|.+||++.+++.+-
T Consensus 239 ~~l~~~~~rr~s~~~ll~h~ 258 (333)
T cd05600 239 KLINDPSRRFGSLEDIKNHP 258 (333)
T ss_pred HHhhChhhhcCCHHHHHhCc
Confidence 99999999999999999883
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-44 Score=309.91 Aligned_cols=244 Identities=20% Similarity=0.235 Sum_probs=211.0
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
++.+.||+|-||.||.|+ .+++-.||+|++.++.. ....++.+|+++-+.|+||||+++|++|.+....||++||.
T Consensus 25 eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya 104 (281)
T KOG0580|consen 25 EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYA 104 (281)
T ss_pred cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEec
Confidence 577889999999999999 56688899999876542 23568999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--CCccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSYS 210 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~~~ 210 (488)
.+|+|...|.......+++.....++.|++.||.|+|.++ ||||||||+|+|++..+.+|++|||-+..... ..+.+
T Consensus 105 ~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlc 183 (281)
T KOG0580|consen 105 PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLC 183 (281)
T ss_pred CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeee
Confidence 9999999998666678999999999999999999999999 99999999999999999999999998876533 34789
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
||..|.+||+..+...+...|+|++|++.||++.|.+||.....+.. ...+.. ..-.+|..++.+..++|++|+
T Consensus 184 gt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~et----YkrI~k--~~~~~p~~is~~a~dlI~~ll 257 (281)
T KOG0580|consen 184 GTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSET----YKRIRK--VDLKFPSTISGGAADLISRLL 257 (281)
T ss_pred cccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHH----HHHHHH--ccccCCcccChhHHHHHHHHh
Confidence 99999999999999999999999999999999999999876532211 111111 122345667889999999999
Q ss_pred cCCCCCCCCHHHHHHHh
Q 011349 291 QYEPRERPNAKSLVASL 307 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~l 307 (488)
.++|.+|.+..+++.|-
T Consensus 258 ~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 258 VKNPIERLALTEVMDHP 274 (281)
T ss_pred ccCccccccHHHHhhhH
Confidence 99999999999999874
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=344.71 Aligned_cols=238 Identities=18% Similarity=0.230 Sum_probs=199.3
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.||+|+||.||++. ..+++.||||++..... .....+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 57999999999999 45689999999975432 234568899999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cccccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTN 212 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t 212 (488)
|..++. ....+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 82 LFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 998886 3457999999999999999999999999 999999999999999999999999998754321 235689
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 292 (488)
+.|+|||++.+..++.++|||||||++|+|++|+.||.............. ....++...+.++.+++.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~------~~~~~p~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM------EDIKFPRTLSADAKSLLSGLLIK 232 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc------CCccCCCCCCHHHHHHHHHHcCC
Confidence 999999999988999999999999999999999998865432221111100 11123445678899999999999
Q ss_pred CCCCCC-----CHHHHHHHh
Q 011349 293 EPRERP-----NAKSLVASL 307 (488)
Q Consensus 293 dp~~Rp-----s~~~il~~l 307 (488)
||.+|| ++.++++|-
T Consensus 233 dP~~R~~~~~~~~~~il~h~ 252 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRHS 252 (328)
T ss_pred CHHHcCCCCCCCHHHHhcCC
Confidence 999997 899999873
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=345.50 Aligned_cols=252 Identities=21% Similarity=0.250 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..+.+++.||+|+||.||++.. .++..||+|.+...... ....+.+|+++|++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 3567889999999999999995 46888999998765322 235799999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Ccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 209 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~ 209 (488)
++|++|.+++. ....+++..+..++.|++.||.|||+.+.|+||||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 85 MDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 99999999996 34568999999999999999999998644999999999999999999999999998765432 245
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc---cc--------c---------------
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK---NF--------L--------------- 263 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~---~~--------~--------------- 263 (488)
.+|+.|+|||++.+..++.++|||||||++|||+||+.||........... .. .
T Consensus 163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence 689999999999988899999999999999999999998854322111000 00 0
Q ss_pred ------------cccc---cccCCCC-ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 264 ------------MLMD---SCLEGHF-SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 264 ------------~~~~---~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
...+ ....... ....++++.+|+.+||+.||++|||+.++++|.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0000 0000011 113467899999999999999999999999984
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=347.35 Aligned_cols=245 Identities=19% Similarity=0.213 Sum_probs=203.8
Q ss_pred CCcccccccCCCCCCceEEEEEeCC--CcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDE--DRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+..+.+++.||+|+||.||+|.+.. +..||||++.... ....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3456788999999999999998433 3689999986432 1234568899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 109 v~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~ 185 (340)
T PTZ00426 109 VLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT 185 (340)
T ss_pred EEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCCc
Confidence 999999999999997 4457999999999999999999999999 999999999999999999999999999865433
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
....||+.|+|||++.+..++.++|||||||++|||++|..||........... +.... ..++...+..+.+++
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~----i~~~~--~~~p~~~~~~~~~li 259 (340)
T PTZ00426 186 YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQK----ILEGI--IYFPKFLDNNCKHLM 259 (340)
T ss_pred ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHH----HhcCC--CCCCCCCCHHHHHHH
Confidence 345789999999999988899999999999999999999998865432211111 11111 123444567889999
Q ss_pred HHhccCCCCCCC-----CHHHHHHH
Q 011349 287 SRCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rp-----s~~~il~~ 306 (488)
.+||+.||++|+ +++++++|
T Consensus 260 ~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 260 KKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHcccCHHHcCCCCCCCHHHHHcC
Confidence 999999999995 89999887
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=342.16 Aligned_cols=236 Identities=20% Similarity=0.230 Sum_probs=196.8
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||+|+||.||+|.. .+++.||||+++... ......+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999995 468899999987532 22345688999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNL 213 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~ 213 (488)
.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....||+
T Consensus 81 ~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQ--REGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 99986 3456999999999999999999999999 999999999999999999999999998754322 2356899
Q ss_pred CCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 214 ~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
.|+|||++.+..++.++|||||||++|||+||+.||........... .... ...++...++.+.+++.+||..|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRK----ILQE--PLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHH----HHcC--CCCCCCcCCHHHHHHHHHHcCCC
Confidence 99999999998999999999999999999999999865432221111 1111 11334456788999999999999
Q ss_pred CCCCCC---HHHHHHH
Q 011349 294 PRERPN---AKSLVAS 306 (488)
Q Consensus 294 p~~Rps---~~~il~~ 306 (488)
|.+||+ +.+++.|
T Consensus 232 p~~R~~~~~~~e~l~h 247 (312)
T cd05585 232 PTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHcCCCCCHHHHHcC
Confidence 999975 6777766
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=351.11 Aligned_cols=249 Identities=21% Similarity=0.327 Sum_probs=200.0
Q ss_pred ccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
+.+.+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.++..+ +||||++++++|..++..++
T Consensus 37 ~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~l 116 (375)
T cd05104 37 LSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLV 116 (375)
T ss_pred eehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCccee
Confidence 46778899999999999973 2356899999975432 2345788999999999 89999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------------------------------------------------------------
Q 011349 128 VAEFMPNETLSKHLFHWE-------------------------------------------------------------- 145 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~-------------------------------------------------------------- 145 (488)
||||++||+|.+++....
T Consensus 117 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (375)
T cd05104 117 ITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYID 196 (375)
T ss_pred eehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecc
Confidence 999999999999885321
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC------c
Q 011349 146 -----------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------S 208 (488)
Q Consensus 146 -----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~ 208 (488)
...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++...... .
T Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 275 (375)
T cd05104 197 QDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGN 275 (375)
T ss_pred cccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCC
Confidence 125789999999999999999999999 9999999999999999999999999998654322 1
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||.+.+..++.++|||||||++|||++ |..|+....... .....+........+...+.++.+|+.
T Consensus 276 ~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~ 351 (375)
T cd05104 276 ARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS----KFYKMIKEGYRMLSPECAPSEMYDIMK 351 (375)
T ss_pred CCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH----HHHHHHHhCccCCCCCCCCHHHHHHHH
Confidence 233567999999999999999999999999999998 666665432111 111111111122223344678999999
Q ss_pred HhccCCCCCCCCHHHHHHHhch
Q 011349 288 RCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~ 309 (488)
+||+.||++|||+.+|++.|+.
T Consensus 352 ~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 352 SCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHccCChhHCcCHHHHHHHHHh
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=344.41 Aligned_cols=237 Identities=18% Similarity=0.238 Sum_probs=197.9
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.||+|+||.||++. ..+|..||+|+++.... .....+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 57999999999999 45689999999975421 223467889999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cccccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTN 212 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t 212 (488)
|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||
T Consensus 82 L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 82 LFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence 998886 3457999999999999999999999999 999999999999999999999999998753221 235689
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 292 (488)
+.|+|||++.+..++.++|||||||++|||++|+.||............ ... ...++...++++.+++.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~----~~~--~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI----LME--EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----hcC--CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999889999999999999999999999988654222111111 100 1123445678899999999999
Q ss_pred CCCCCC-----CHHHHHHH
Q 011349 293 EPRERP-----NAKSLVAS 306 (488)
Q Consensus 293 dp~~Rp-----s~~~il~~ 306 (488)
||.+|| ++.++++|
T Consensus 233 dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CHHHhCCCCCCCHHHHHcC
Confidence 999998 89999887
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=351.06 Aligned_cols=252 Identities=21% Similarity=0.323 Sum_probs=202.4
Q ss_pred cccccccCCCCCCceEEEEEe-C-----CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-D-----EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~-----~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
.+.+.+.||+|+||.||+|.. . ++..||||+++...... ...+.+|+.+++.+ +|+|||+++++|...+..+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 346788899999999999873 2 23579999997654222 35688999999999 8999999999999999999
Q ss_pred EEEecCCCCChhhhhccCC-------------------------------------------------------------
Q 011349 127 LVAEFMPNETLSKHLFHWE------------------------------------------------------------- 145 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~------------------------------------------------------------- 145 (488)
+||||+++|+|.+++....
T Consensus 119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T cd05106 119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK 198 (374)
T ss_pred EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence 9999999999999885311
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC------ccccc
Q 011349 146 -------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTN 212 (488)
Q Consensus 146 -------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t 212 (488)
..++++.++++++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++...... ...++
T Consensus 199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~ 277 (374)
T cd05106 199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277 (374)
T ss_pred chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence 135788999999999999999999999 9999999999999999999999999987654322 12235
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
+.|+|||++.+..++.++|||||||++|||++ |+.||+...... ..............+...++++.+++.+||+
T Consensus 278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 353 (374)
T cd05106 278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS----KFYKMVKRGYQMSRPDFAPPEIYSIMKMCWN 353 (374)
T ss_pred cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH----HHHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence 67999999988899999999999999999997 888876532111 1111111112222333456889999999999
Q ss_pred CCCCCCCCHHHHHHHhchhh
Q 011349 292 YEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 292 ~dp~~Rps~~~il~~l~~~~ 311 (488)
.||.+|||+.++++.|+++.
T Consensus 354 ~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 354 LEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CChhhCcCHHHHHHHHHHHh
Confidence 99999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-43 Score=333.58 Aligned_cols=249 Identities=20% Similarity=0.274 Sum_probs=203.3
Q ss_pred cccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+.+.+.||+|+||.||+|.+. .+..||+|.++..... ....+.+|+.++.+++||||+++++++..++..++||
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 85 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVT 85 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEE
Confidence 4577888999999999999843 3668999999865422 2357899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.++++|||.+.......
T Consensus 86 e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~ 163 (266)
T cd05064 86 EYMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY 163 (266)
T ss_pred EeCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccchh
Confidence 99999999999864 2357899999999999999999999999 9999999999999999999999999876543221
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...++..|+|||.+.+..++.++|||||||++||+++ |..||........ ...+........+..++..+.
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 238 (266)
T cd05064 164 TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV-----IKAVEDGFRLPAPRNCPNLLH 238 (266)
T ss_pred cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH-----HHHHHCCCCCCCCCCCCHHHH
Confidence 2234578999999998999999999999999999775 8888765422211 111111112233455678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+++.+||+.+|.+||++.+|++.|.++
T Consensus 239 ~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 239 QLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-43 Score=330.79 Aligned_cols=250 Identities=22% Similarity=0.309 Sum_probs=207.5
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+.++++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 4567889999999999999998788889999987543 235689999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05072 85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 163 (261)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceeccCC
Confidence 999999997555567899999999999999999999999 9999999999999999999999999998654322 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||++.+..++.++|||||||++|+|+| |..|+........... +......+.....+.++.+++.
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~ 238 (261)
T cd05072 164 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA-----LQRGYRMPRMENCPDELYDIMK 238 (261)
T ss_pred CccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH-----HHcCCCCCCCCCCCHHHHHHHH
Confidence 234568999999988889999999999999999998 8877754322111111 1111111222345678999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchh
Q 011349 288 RCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+||..+|++||+++++.+.|+.+
T Consensus 239 ~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 239 TCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHccCCcccCcCHHHHHHHHhcC
Confidence 99999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=368.50 Aligned_cols=253 Identities=24% Similarity=0.378 Sum_probs=210.3
Q ss_pred cccccCCCCCCceEEEEEeCC--Cc----EEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE--DR----WIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+...||+|+||.||+|.+.+ |. .||||.++... .+...+|.+|..+|+.++|||||+++|+|.+....+|++
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~l 774 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILL 774 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEe
Confidence 445678999999999999543 43 38999998764 334568999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 130 EFMPNETLSKHLFHW-----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 130 e~~~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
|||+||+|..+|++. ....++....+.++.|||+|+.||++++ +|||||..+|+||+....|||+|||+|+...
T Consensus 775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARDIY 853 (1025)
T ss_pred hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHhhh
Confidence 999999999999863 1456899999999999999999999999 9999999999999999999999999999554
Q ss_pred CCCcc------ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccc-ccccccCCCCChh
Q 011349 205 DGKSY------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM-LMDSCLEGHFSND 277 (488)
Q Consensus 205 ~~~~~------~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 277 (488)
....+ .-...|||||.+..+.+|.|+|||||||+|||++|...+|+.. .....+.. ..... +-..|..
T Consensus 854 ~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~----~~n~~v~~~~~~gg-RL~~P~~ 928 (1025)
T KOG1095|consen 854 DKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPS----RSNFEVLLDVLEGG-RLDPPSY 928 (1025)
T ss_pred hchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCC----cchHHHHHHHHhCC-ccCCCCC
Confidence 43211 2246899999999999999999999999999999976655543 11122222 11222 4566778
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
||..+.+||..||+.+|++||++..|++.+..+.....
T Consensus 929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 929 CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 89999999999999999999999999998887766543
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-43 Score=304.96 Aligned_cols=257 Identities=18% Similarity=0.193 Sum_probs=210.9
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC-----ee
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE-----ER 125 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 125 (488)
|-+.|+|.+.||+|||+.||+++ ..++..+|+|++......+.+...+|++..++++||||++++++...+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34578999999999999999999 7789999999998877677888999999999999999999999886544 48
Q ss_pred eEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeecCCCCCeeccCCCccc
Q 011349 126 LLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
||+++|...|||.+.+... ++..+++.+++.|+.+|++||.+||+.. +++||||||.|||+++.+.++|.|||.+..
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 9999999999999998753 4457999999999999999999999985 599999999999999999999999999875
Q ss_pred CCCC-------------CccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-ccc
Q 011349 203 SRDG-------------KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-LML 265 (488)
Q Consensus 203 ~~~~-------------~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~ 265 (488)
..-. .....|..|.|||.+.- ...+.++|||||||+||+|+.|..||..... .+..+ ..+
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSlaLAv 255 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLALAV 255 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEEEee
Confidence 5321 12345899999999864 4578899999999999999999999864321 11111 112
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
......-+-....+..+.+++..|++.||.+||++.+++..+..+.
T Consensus 256 ~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 256 QNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 2212211222236789999999999999999999999999987653
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-43 Score=330.30 Aligned_cols=249 Identities=21% Similarity=0.335 Sum_probs=207.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
++.+.+.||+|+||.||+|.. ++++.||+|++.... .....+.+|+.+++.++|+||+++++++...+..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 346677889999999999994 458889999987543 345679999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++....... .
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~ 164 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 164 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeeccCC
Confidence 999999987544567899999999999999999999999 9999999999999999999999999988765432 1
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||.+.+..++.++|||||||++|||++ |..|++....... ...+........+...+.++.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~ 239 (263)
T cd05052 165 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----YELLEKGYRMERPEGCPPKVYELMR 239 (263)
T ss_pred CCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 123567999999998899999999999999999998 8877765422211 1111122233445556789999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchh
Q 011349 288 RCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+||..+|++|||+.++++.|+.+
T Consensus 240 ~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 240 ACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHccCCcccCCCHHHHHHHHHhh
Confidence 99999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-43 Score=337.55 Aligned_cols=252 Identities=21% Similarity=0.254 Sum_probs=197.8
Q ss_pred cccccccCCCCCCceEEEEEeCC-----------------CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccc
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE-----------------DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLI 116 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~ 116 (488)
.+.+.++||+|+||.||+|.+.+ +..||||.+...... ....+.+|+.++.+++||||++++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 85 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL 85 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 45678889999999999997532 346999998765322 235789999999999999999999
Q ss_pred cceecCCeeeEEEecCCCCChhhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc
Q 011349 117 GCCCEGEERLLVAEFMPNETLSKHLFHWE-----------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179 (488)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dl 179 (488)
+++.+.+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~dl 164 (304)
T cd05096 86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDL 164 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCc
Confidence 99999999999999999999999885321 134788899999999999999999999 999999
Q ss_pred cCCceeecCCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCC--CCCCc
Q 011349 180 NTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK--HIPPS 251 (488)
Q Consensus 180 kp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~--~p~~~ 251 (488)
||+|||++.++.+||+|||+++...... ...++..|+|||++.++.++.++|||||||++|||+++. .|+..
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 9999999999999999999998654322 223467899999998888999999999999999998754 44433
Q ss_pred chhhhhhccccccccc---cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 252 HALDLIRGKNFLMLMD---SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 252 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
........ ....... .......+..++..+.+++.+||+.+|++|||+.+|.+.|+
T Consensus 245 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 245 LTDEQVIE-NAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCHHHHHH-HHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 21111100 0000000 01111223456788999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-43 Score=347.08 Aligned_cols=247 Identities=23% Similarity=0.218 Sum_probs=203.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++..++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 457888999999999999995 4689999999975421 234578899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++|++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 82 YMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999999974 367999999999999999999999999 9999999999999999999999999987654322
Q ss_pred ------------------------------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh
Q 011349 208 ------------------------------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI 257 (488)
Q Consensus 208 ------------------------------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~ 257 (488)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 34678999999999999999999999999999999999998865432211
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC-HHHHHHHh
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN-AKSLVASL 307 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~il~~l 307 (488)
... +.... .....+.....++++.+++.+||. +|.+||+ +.++++|.
T Consensus 239 ~~~-i~~~~-~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp 286 (350)
T cd05573 239 YNK-IINWK-ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286 (350)
T ss_pred HHH-HhccC-CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence 110 00000 111111112247889999999997 9999999 99999973
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=327.19 Aligned_cols=246 Identities=21% Similarity=0.313 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++.+++.||+|+||.||++.+.++..+|+|.+.... .....+.+|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 3457788999999999999998788889999987543 335678999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+|+|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++...... .
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 83 NGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred CCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 99999988642 346899999999999999999999999 9999999999999999999999999987654322 1
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||.+.+..++.++||||||+++|||++ |+.|+........... + ........+...+..+.+++.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~----i-~~~~~~~~~~~~~~~~~~li~ 235 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEM----I-SRGFRLYRPKLASMTVYEVMY 235 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH----H-HCCCCCCCCCCCCHHHHHHHH
Confidence 234567999999998889999999999999999999 7777654321111100 0 001111123334578999999
Q ss_pred HhccCCCCCCCCHHHHHHHh
Q 011349 288 RCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l 307 (488)
+||..+|.+||++.++++.|
T Consensus 236 ~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 236 SCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHccCCcccCcCHHHHHHhh
Confidence 99999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-43 Score=333.82 Aligned_cols=250 Identities=23% Similarity=0.349 Sum_probs=204.7
Q ss_pred cccccccCCCCCCceEEEEEeCC-C-----cEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE-D-----RWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
++.+++.||+|+||.||+|.... + ..||+|.++..... ....+.+|+.++++++||||+++++++......++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 45778899999999999998432 2 57999998754422 23568999999999999999999999998889999
Q ss_pred EEecCCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 128 VAEFMPNETLSKHLFHWEN--------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
+|||+++++|.+++..... ..+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.++
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~ 164 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVK 164 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcEE
Confidence 9999999999999864211 45889999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccc
Q 011349 194 LSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 194 l~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 266 (488)
|+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+...... ...+
T Consensus 165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~-----~~~i 239 (283)
T cd05048 165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV-----IEMI 239 (283)
T ss_pred ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHH
Confidence 9999998765332 12345788999999988899999999999999999998 8888765322211 1111
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
........+..++.++.+|+.+||+.+|.+||++.+|+++|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 240 RSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11122234456778999999999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-43 Score=347.17 Aligned_cols=247 Identities=19% Similarity=0.178 Sum_probs=198.1
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||+|. ..+++.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 35788999999999999999 45688999999975432 223568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 205 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||+++....
T Consensus 82 ~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 999999999986 3456899999999999999999999999 99999999999999999999999999753210
Q ss_pred ----------------------------------------------CCccccccCCCCccccccCCcccCCceEeehHHH
Q 011349 206 ----------------------------------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL 239 (488)
Q Consensus 206 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il 239 (488)
.....||+.|+|||.+.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 0124689999999999988899999999999999
Q ss_pred HHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH--hccCCCCCCCCHHHHHHH
Q 011349 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR--CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 240 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dp~~Rps~~~il~~ 306 (488)
|||+||..||.............. .......+.....++++.+++.+ |+..+|..||++.+++.|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVIN--WENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHc--cccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 999999998865432211111000 00111111112346788999988 445666679999999998
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=333.14 Aligned_cols=249 Identities=19% Similarity=0.219 Sum_probs=199.0
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||+|... +++.||||+++.... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 4578889999999999999954 688899999875432 2345788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 206 (488)
++++++..+.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99877765443 3456999999999999999999999999 999999999999999999999999999865432
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh--hccc------------------ccccc
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--RGKN------------------FLMLM 266 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~--~~~~------------------~~~~~ 266 (488)
....+|+.|+|||++.+..++.++|||||||++|||++|++||+....... .... .....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 234678999999999988899999999999999999999988865421110 0000 00000
Q ss_pred ccccC------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DSCLE------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+... .......+..+.+|+.+||+.||++|||++++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 00111246779999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=338.64 Aligned_cols=238 Identities=20% Similarity=0.256 Sum_probs=197.6
Q ss_pred ccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC----CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 60 SEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW----PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.||+|+||.||++.. .+++.||||+++.... .....+.+|+.+|+.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5689999999999984 3578899999875321 2234678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 99999999986 4456889999999999999999999999 999999999999999999999999998753322 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+... ....+...++.+.+++.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~li~ 232 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTI----DKILKG--KLNLPPYLTPEARDLLK 232 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHH----HHHHcC--CCCCCCCCCHHHHHHHH
Confidence 346899999999999888999999999999999999999988654322111 111111 11234455788999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 011349 288 RCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rp-----s~~~il~~ 306 (488)
+||+.+|++|| ++.+++.+
T Consensus 233 ~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 233 KLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHcccCHhHcCCCCCCCHHHHhcC
Confidence 99999999999 89998886
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-43 Score=341.92 Aligned_cols=238 Identities=20% Similarity=0.237 Sum_probs=197.7
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.||+|+||.||++. ..+|+.||+|++..... .....+.+|++++..++||||+++++++...+..++||||++||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 57999999999999 45789999999975421 224567889999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYST 211 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~ 211 (488)
|..++. ....+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++..... ....|
T Consensus 82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 82 LFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence 998886 34579999999999999999999997 67 999999999999999999999999998753221 23468
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||+||+.||............. . ....++...++++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~----~--~~~~~p~~~~~~~~~li~~~L~ 232 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL----M--EEIRFPRTLSPEAKSLLSGLLK 232 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh----c--CCCCCCCCCCHHHHHHHHHHhh
Confidence 999999999998899999999999999999999999886543221111100 0 0112344557889999999999
Q ss_pred CCCCCCC-----CHHHHHHHh
Q 011349 292 YEPRERP-----NAKSLVASL 307 (488)
Q Consensus 292 ~dp~~Rp-----s~~~il~~l 307 (488)
.||++|+ ++.++++|-
T Consensus 233 ~dP~~R~~~~~~~~~~il~h~ 253 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQHK 253 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcCC
Confidence 9999996 899999873
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-43 Score=345.49 Aligned_cols=247 Identities=18% Similarity=0.188 Sum_probs=196.6
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.++++.+++.||+|+||.||+|.. .+++.||||++...... ....+.+|+++++.++|+||+++++++...+..++||
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 344556778899999999999994 46899999998654322 2357899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||+++++|.+.. ..++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 152 e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 152 EFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred ecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence 999999986543 3567888999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 -KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....||..|+|||++.. ...+.++|||||||++|||++|+.||.......+.. ....+........+...+.
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 302 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWAS--LMCAICMSQPPEAPATASR 302 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHH--HHHHHhccCCCCCCCccCH
Confidence 24578999999998753 234568999999999999999999886321111100 0000000111223345578
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+|+.+||..||++|||+.++++|-
T Consensus 303 ~l~~li~~~l~~~P~~Rpt~~ell~hp 329 (353)
T PLN00034 303 EFRHFISCCLQREPAKRWSAMQLLQHP 329 (353)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 899999999999999999999999983
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-44 Score=336.70 Aligned_cols=244 Identities=27% Similarity=0.449 Sum_probs=194.7
Q ss_pred ccccCCCCCCceEEEEEeC-----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 58 IVSEHGEKAPNVVYKGLVD-----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.+.||.|+||.||+|.+. .+..|+||.++..... ..+.+.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4567899999999999965 3667999999764322 257899999999999999999999999988889999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 206 (488)
+++|+|.++|.......+++.+++.|+.||+.||.|||+.+ ++|+||+++||++++++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 99999999998654678999999999999999999999998 999999999999999999999999999876322
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
........|+|||.+.+..++.++||||||+++|||+| |+.|+....... +...+........+..++..+.+
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 236 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE-----IIEKLKQGQRLPIPDNCPKDIYS 236 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH-----HHHHHHTTEETTSBTTSBHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccccceeccchhHHHHH
Confidence 22345678999999998889999999999999999999 566654432111 11111122223344456788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+||+.+|++|||+.++++.|
T Consensus 237 li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 237 LIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHhcC
Confidence 99999999999999999999875
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-43 Score=329.30 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=209.8
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
+.+++.||.|+||.||+|...++..||+|++..........+.+|+.+++.++|+||+++++++......++||||++++
T Consensus 8 y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (261)
T cd05148 8 FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKG 87 (261)
T ss_pred HHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccC
Confidence 56788899999999999997778999999998776555678999999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~~~ 211 (488)
+|.+++.......+++.++..++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++....... ...+
T Consensus 88 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~ 166 (261)
T cd05148 88 SLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI 166 (261)
T ss_pred CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCC
Confidence 9999997655667999999999999999999999999 9999999999999999999999999987654321 2234
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
+..|++||.+.+..++.++||||||+++|+|++ |..|+........ + ..+........+..++..+.+++.+||
T Consensus 167 ~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~i~~~l 241 (261)
T cd05148 167 PYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV----Y-DQITAGYRMPCPAKCPQEIYKIMLECW 241 (261)
T ss_pred ceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH----H-HHHHhCCcCCCCCCCCHHHHHHHHHHc
Confidence 568999999988889999999999999999998 7777654321111 1 111112222344566788999999999
Q ss_pred cCCCCCCCCHHHHHHHhchh
Q 011349 291 QYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~l~~~ 310 (488)
..+|.+|||+.++++.|+.+
T Consensus 242 ~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 242 AAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCchhCcCHHHHHHHHhcC
Confidence 99999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=337.13 Aligned_cols=252 Identities=16% Similarity=0.264 Sum_probs=203.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCc----EEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDR----WIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++++++.||+|+||.||+|.+ .++. .||||+++.... ...+.+.+|+.+++.++||||+++++++... ..++|
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v 86 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI 86 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceee
Confidence 457788899999999999984 3344 389999975432 2346789999999999999999999998764 57899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
+||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 87 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 164 (316)
T cd05108 87 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK 164 (316)
T ss_pred eecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCCc
Confidence 999999999999874 2346899999999999999999999999 9999999999999999999999999998764322
Q ss_pred -----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...++..|+|||.+.+..++.++|||||||++|||+| |..|+.+...... ...+........+..++..
T Consensus 165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd05108 165 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-----SSILEKGERLPQPPICTID 239 (316)
T ss_pred ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHhCCCCCCCCCCCCHH
Confidence 1223568999999998899999999999999999998 8877754322211 1111111122223445678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+.+++.+||..+|.+||++.+++..|..+....
T Consensus 240 ~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 240 VYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999998887654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=318.76 Aligned_cols=249 Identities=20% Similarity=0.246 Sum_probs=199.7
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCC-CcccccceecCC------ee
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSER-LVNLIGCCCEGE------ER 125 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~------~~ 125 (488)
+..+++||+|+||+||+|+ ..+|+.||+|++...... ......+|+.+|+.++|+| ||++++++...+ ..
T Consensus 13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l 92 (323)
T KOG0594|consen 13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL 92 (323)
T ss_pred HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence 4556678999999999999 667999999999876532 3456799999999999999 999999998877 78
Q ss_pred eEEEecCCCCChhhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 126 LLVAEFMPNETLSKHLFHWEN--QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
++|+||++ .+|..++..... ..++...+..++.||+.||+|||+++ |+||||||.|||++++|.+||+|||+|+..
T Consensus 93 ~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 93 YLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLARAF 170 (323)
T ss_pred EEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchHHHh
Confidence 99999997 799999975332 35788899999999999999999999 999999999999999999999999999865
Q ss_pred CC----CCccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-----------cccccccc-
Q 011349 204 RD----GKSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----------GKNFLMLM- 266 (488)
Q Consensus 204 ~~----~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-----------~~~~~~~~- 266 (488)
.- -.+..+|..|.|||++.|. .|+...||||+|||+.||+++++.|++....... ...+....
T Consensus 171 ~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~ 250 (323)
T KOG0594|consen 171 SIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSS 250 (323)
T ss_pred cCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccc
Confidence 42 2345679999999999885 6999999999999999999999988876321110 01110000
Q ss_pred ----ccccC-----CCCChh---hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 ----DSCLE-----GHFSND---DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ----~~~~~-----~~~~~~---~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..... ...... ..+...+++.+||+.+|.+|.|+..++.|
T Consensus 251 ~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 251 LPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 00000 001111 12478999999999999999999999998
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=338.60 Aligned_cols=241 Identities=21% Similarity=0.272 Sum_probs=204.5
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 59 VSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++.||+|+||-||-|. ..+.+.||||+++-+..+. ..++.+|+..|++++|||+|.+-|||......+||||||-
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl- 109 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL- 109 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-
Confidence 4678999999999999 5678889999998765444 4579999999999999999999999999999999999996
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccccC
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 214 (488)
||-.|++.- ...++-+..+..|..+.+.||+|||+.+ .||||||..|||+++.|.|||+|||.|....+..+++|||.
T Consensus 110 GSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPy 187 (948)
T KOG0577|consen 110 GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPY 187 (948)
T ss_pred ccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCCcc
Confidence 787787743 4567999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 215 FTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 215 y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|||||++.. +.|+-++|||||||+..||.-.++|...... +. .+-.+-....+.-.....+..+.+++..||+
T Consensus 188 wMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-MS---ALYHIAQNesPtLqs~eWS~~F~~Fvd~CLq 263 (948)
T KOG0577|consen 188 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MS---ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQ 263 (948)
T ss_pred ccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-HH---HHHHHHhcCCCCCCCchhHHHHHHHHHHHHh
Confidence 999999854 7899999999999999999999977544311 00 0111111111111244678899999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 011349 292 YEPRERPNAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~~il~~ 306 (488)
+-|.+|||.++++.|
T Consensus 264 KipqeRptse~ll~H 278 (948)
T KOG0577|consen 264 KIPQERPTSEELLKH 278 (948)
T ss_pred hCcccCCcHHHHhhc
Confidence 999999999999886
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-43 Score=346.12 Aligned_cols=246 Identities=17% Similarity=0.136 Sum_probs=199.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++..++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 457788999999999999994 5689999999975321 223467889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||+++.....
T Consensus 82 ~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 82 YLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999987 3456999999999999999999999999 999999999999999999999999998653211
Q ss_pred --------------------------------------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCC
Q 011349 207 --------------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI 248 (488)
Q Consensus 207 --------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p 248 (488)
....||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 023589999999999988999999999999999999999998
Q ss_pred CCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC---HHHHHHH
Q 011349 249 PPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN---AKSLVAS 306 (488)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~ 306 (488)
|............ ... ............++.+.+++.+|+. +|.+|++ +.+++.|
T Consensus 239 f~~~~~~~~~~~i-~~~-~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 239 FCSDNPQETYRKI-INW-KETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCHHHHHHHH-HcC-CCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 8654322111000 000 0001101111346788999999996 9999987 9999887
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=339.64 Aligned_cols=250 Identities=21% Similarity=0.269 Sum_probs=200.6
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.++++||.|+||.||++... ++..||+|.+...... ....+.+|++++++++||||++++++|..++..++||||+
T Consensus 6 ~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 85 (333)
T cd06650 6 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 85 (333)
T ss_pred hhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecC
Confidence 4578889999999999999954 6888999998764322 2356899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYS 210 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~ 210 (488)
++++|.+++. ....+++..+..++.|++.||.|||+.++++||||||+|||+++++.+||+|||++...... ....
T Consensus 86 ~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 163 (333)
T cd06650 86 DGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (333)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence 9999999996 34568999999999999999999998533999999999999999999999999998765332 3456
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-------cccc--------------------
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------KNFL-------------------- 263 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-------~~~~-------------------- 263 (488)
+|..|+|||++.+..++.++|||||||++|||++|+.||.......... ....
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (333)
T cd06650 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGP 243 (333)
T ss_pred CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcc
Confidence 8899999999998889999999999999999999998876432111100 0000
Q ss_pred ---------cccccc---cCCCCC-hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 ---------MLMDSC---LEGHFS-NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ---------~~~~~~---~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+.. .....+ ...+.++.+|+.+||+.||++|||+.+++.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 244 DSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred cccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 000000 000011 1235678999999999999999999999987
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=325.84 Aligned_cols=248 Identities=22% Similarity=0.328 Sum_probs=205.8
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+++++.||+|++|.||+|...+++.||||.++... ...+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY 85 (261)
T ss_pred heeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccC
Confidence 357788899999999999997777889999997654 3456799999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--cc---
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--SY--- 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~~--- 209 (488)
++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++...... ..
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 164 (261)
T cd05068 86 GSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGA 164 (261)
T ss_pred CcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCC
Confidence 99999997544457999999999999999999999999 9999999999999999999999999988664322 11
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+..|+|||.+.+..++.++||||||+++|||+| |+.|+......... ..+........+...+..+.+++.+
T Consensus 165 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~ 239 (261)
T cd05068 165 KFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVL-----QQVDQGYRMPCPPGCPKELYDIMLD 239 (261)
T ss_pred cCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 12357999999998889999999999999999999 88776543221111 1111111122344567889999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|.+||++.+++..|+.
T Consensus 240 ~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 240 CWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HhhcCcccCCCHHHHHHHHhc
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=332.52 Aligned_cols=251 Identities=19% Similarity=0.246 Sum_probs=199.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.|.++++||.|+||.||+|.. .+++.||+|+++.... .....+.+|+.++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 45678889999999999999994 4688999999875432 234568899999999999999999999999899999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~ 160 (288)
T cd07871 84 YLD-SDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY 160 (288)
T ss_pred CCC-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence 997 589888854 3345899999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc--------------------cccccc
Q 011349 207 KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG--------------------KNFLML 265 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~--------------------~~~~~~ 265 (488)
....+++.|+|||.+.+ ..++.++|||||||++|||+||++||.......... ..+...
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07871 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY 240 (288)
T ss_pred cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence 23467899999999875 568999999999999999999998886542211000 000000
Q ss_pred cccccCC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 MDSCLEG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ~~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.... ......+.++.+|+.+||..||.+|||++++++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 0011345678999999999999999999999976
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=338.06 Aligned_cols=242 Identities=19% Similarity=0.279 Sum_probs=197.4
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHH---hhcCCCCCcccccceecCCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAV---GLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
|++++.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++ +.++||||+++++++..++..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 35778899999999999994 568999999997542 12234566776665 566799999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 205 (488)
|||++|++|...+. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 99999999998884 456999999999999999999999999 99999999999999999999999999875332
Q ss_pred -CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 206 -GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 206 -~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||........... +... ...++...+..+.+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~ 230 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDS----IVND--EVRYPRFLSREAIS 230 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhC--CCCCCCCCCHHHHH
Confidence 2245689999999999998999999999999999999999998865432211111 1111 11234455788999
Q ss_pred HHHHhccCCCCCCC-----CHHHHHHHh
Q 011349 285 LASRCLQYEPRERP-----NAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rp-----s~~~il~~l 307 (488)
++.+||..||.+|| ++.+++++-
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 99999999999999 678887763
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=344.69 Aligned_cols=253 Identities=20% Similarity=0.270 Sum_probs=203.2
Q ss_pred cccccccCCCCCCceEEEEEeC-C-----CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcC-CCCCcccccceecCCeee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-E-----DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 126 (488)
.+.+++.||+|+||.||+|... . +..||||+++..... ..+.+.+|+.++.++. ||||+++++++...+..+
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~ 117 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIY 117 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceE
Confidence 4567889999999999999842 1 346999999765432 2457899999999996 999999999999999999
Q ss_pred EEEecCCCCChhhhhccCC-------------------------------------------------------------
Q 011349 127 LVAEFMPNETLSKHLFHWE------------------------------------------------------------- 145 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~------------------------------------------------------------- 145 (488)
+||||+++|+|.+++....
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T cd05105 118 IITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEA 197 (400)
T ss_pred EEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhh
Confidence 9999999999998875321
Q ss_pred ---------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCC
Q 011349 146 ---------------------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNP 192 (488)
Q Consensus 146 ---------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~ 192 (488)
...+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~~ 276 (400)
T cd05105 198 SKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKIV 276 (400)
T ss_pred hhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCEE
Confidence 124788899999999999999999999 9999999999999999999
Q ss_pred eeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccc
Q 011349 193 RLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLML 265 (488)
Q Consensus 193 kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 265 (488)
||+|||+++...... ...+++.|+|||.+.+..++.++|||||||++|||++ |..|++....+.. +...
T Consensus 277 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~----~~~~ 352 (400)
T cd05105 277 KICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST----FYNK 352 (400)
T ss_pred EEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH----HHHH
Confidence 999999987653321 2345678999999998889999999999999999997 8877765322111 0111
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
+........+...+..+.+++.+||..+|++|||+.+|.+.|+.+.+
T Consensus 353 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 353 IKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11111222344567889999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=334.68 Aligned_cols=250 Identities=18% Similarity=0.170 Sum_probs=196.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+++.||+|+||.||+|.. .+++.||||+++..... ....+.+|+.+++.++||||+++++++.++...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 3567889999999999999995 46889999999754322 234678999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++..... .
T Consensus 85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 161 (303)
T cd07869 85 VH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161 (303)
T ss_pred CC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence 96 678777754 3456899999999999999999999999 999999999999999999999999998754321 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc--------cc----------cccc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF--------LM----------LMDS 268 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~--------~~----------~~~~ 268 (488)
...+|+.|+|||++.+ ..++.++|||||||++|||+||..||.+........... .. ....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 3467899999999875 457889999999999999999999886531110000000 00 0000
Q ss_pred ccCCCCC---------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 CLEGHFS---------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ~~~~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
......+ ...+..+.+|+.+||+.||.+|||+.++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 0000000 0123568899999999999999999999986
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=343.93 Aligned_cols=248 Identities=19% Similarity=0.171 Sum_probs=202.3
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+...+.+++.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 445678889999999999999994 468899999986432 1233457899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||++||+|.+++. +..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 121 v~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 121 VMEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999999885 345889999999999999999999999 999999999999999999999999998765432
Q ss_pred ----CccccccCCCCccccccC----CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC--h
Q 011349 207 ----KSYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS--N 276 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~----~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 276 (488)
....||+.|+|||.+.+. .++.++|||||||++|||++|+.||........ ...+........++ .
T Consensus 197 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~ 272 (370)
T cd05596 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT----YSKIMDHKNSLTFPDDI 272 (370)
T ss_pred cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH----HHHHHcCCCcCCCCCcC
Confidence 245689999999998653 478899999999999999999999876532211 11111111111122 2
Q ss_pred hhHHHHHHHHHHhccCCCCC--CCCHHHHHHHh
Q 011349 277 DDGTELVRLASRCLQYEPRE--RPNAKSLVASL 307 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~--Rps~~~il~~l 307 (488)
..+.++.+++.+||..+|.+ |+|+.+++.|-
T Consensus 273 ~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 273 EISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred CCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 35688999999999999988 99999999884
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=337.13 Aligned_cols=237 Identities=20% Similarity=0.272 Sum_probs=195.8
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++... ....+.+..|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 579999999999995 468899999987532 22345678899998877 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 82 DLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred hHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 9999886 4457999999999999999999999999 99999999999999999999999999875322 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|+.||............ ... ....+...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i----~~~--~~~~~~~~~~~~~~li~~~L~ 232 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI----LND--EVVYPTWLSQDAVDILKAFMT 232 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH----hcC--CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999888999999999999999999999988654322211111 111 112333456789999999999
Q ss_pred CCCCCCCCH------HHHHHH
Q 011349 292 YEPRERPNA------KSLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~------~~il~~ 306 (488)
.||.+||++ ++++.|
T Consensus 233 ~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 233 KNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred cCHHHCCCCCCCCCHHHHHcC
Confidence 999999998 677665
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=330.04 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=202.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
++.+++++.||+|+||.||+|.. .++..||+|.+..... .....+.+|+.+++.++||||+++++++..+...+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 34567889999999999999983 2467899999975432 22357889999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWE---------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
+||||+++++|.+++.... ...+++.++..++.|++.||.|||+++ ++||||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCc
Confidence 9999999999999885211 235889999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++ |..|+.+...... ..
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~-----~~ 237 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV-----IE 237 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-----HH
Confidence 999999999765332 22334667999999988889999999999999999999 7777654321111 11
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
.+........+..++..+.+++.+||+.+|.+||++.+|++.|..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111122344567889999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=324.80 Aligned_cols=246 Identities=23% Similarity=0.314 Sum_probs=201.8
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++.+++.||+|+||.||+|.+.++..||||.+.... .....+.+|+.++++++||||+++++++......++||||+.+
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 457888999999999999997777779999987544 3456799999999999999999999999988889999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++... ...+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+++...... ..
T Consensus 84 ~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 161 (256)
T cd05113 84 GCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGS 161 (256)
T ss_pred CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCC
Confidence 9999998642 336899999999999999999999999 9999999999999999999999999987654322 12
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|++||.+.+..++.++|||||||++|+|+| |..|+............ ........+...+..+.+++.+
T Consensus 162 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05113 162 KFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV-----SQGLRLYRPHLASEKVYAIMYS 236 (256)
T ss_pred ccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH-----hcCCCCCCCCCCCHHHHHHHHH
Confidence 34567999999988889999999999999999999 87776543221111110 1111111223346789999999
Q ss_pred hccCCCCCCCCHHHHHHHhc
Q 011349 289 CLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~ 308 (488)
||..+|.+||++.+++..|+
T Consensus 237 cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 237 CWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HcCCCcccCCCHHHHHHhhC
Confidence 99999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=345.47 Aligned_cols=247 Identities=18% Similarity=0.162 Sum_probs=199.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.|.+++.||+|+||.||+|. ..+++.||||++.... ......+.+|+.+|++++||||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 356889999999999999999 4568999999986432 122456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
||++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 9999999999996 3456899999999999999999999999 99999999999999999999999999742210
Q ss_pred -------------------------------------------CCccccccCCCCccccccCCcccCCceEeehHHHHHH
Q 011349 206 -------------------------------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242 (488)
Q Consensus 206 -------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el 242 (488)
.....||+.|+|||++.+..++.++|||||||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0124689999999999998999999999999999999
Q ss_pred hhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC---CHHHHHHH
Q 011349 243 LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP---NAKSLVAS 306 (488)
Q Consensus 243 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~il~~ 306 (488)
++|+.||............. ..............++++.+++.+|+ .+|.+|+ ++.+++.|
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVI--NWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHh--ccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999987543221111100 00011111112235677889999977 5999999 89999988
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=336.24 Aligned_cols=237 Identities=18% Similarity=0.247 Sum_probs=196.1
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++... ....+.+..|.+++..+ +||||+++++++..++..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 579999999999995 458899999987542 12334677899999876 7999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|...+. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 82 DLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence 9998886 4456999999999999999999999999 99999999999999999999999999875432 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||+||+.||........... +... ....+...+.++.+++.+||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~ll~~~L~ 232 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFES----ILHD--DVLYPVWLSKEAVSILKAFMT 232 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHHHHHHHhc
Confidence 9999999999988999999999999999999999998865432221111 1111 112233456789999999999
Q ss_pred CCCCCCC-------CHHHHHHH
Q 011349 292 YEPRERP-------NAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rp-------s~~~il~~ 306 (488)
.||++|| ++.++++|
T Consensus 233 ~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 233 KNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred cCHHHcCCCCCCCCCHHHHhcC
Confidence 9999999 88888877
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=339.07 Aligned_cols=247 Identities=19% Similarity=0.223 Sum_probs=199.1
Q ss_pred ccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCC----CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSA----WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
+.+++.||+|+||.||++.. .+++.||+|++.... ....+.+..|+.++..+ +|+||+++++++...+..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 56788999999999999874 358899999986432 12235688899999999 5999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999986 4456999999999999999999999999 999999999999999999999999998764322
Q ss_pred -----CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 -----KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....||+.|+|||.+.+. .++.++|||||||++|||+||+.||...............+.. ....++...+.
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 236 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIGP 236 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCH
Confidence 235689999999999864 4788999999999999999999988532111000000000110 11233445678
Q ss_pred HHHHHHHHhccCCCCCCC-----CHHHHHHHh
Q 011349 281 ELVRLASRCLQYEPRERP-----NAKSLVASL 307 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rp-----s~~~il~~l 307 (488)
.+.+++.+||..||++|| +++++++|-
T Consensus 237 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 237 EAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 899999999999999999 788998873
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=343.28 Aligned_cols=247 Identities=16% Similarity=0.102 Sum_probs=195.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||+||+|.. .+++.||||+++.... .....+.+|+.++..++|+||+++++.+.+....++|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 356788899999999999984 5688999999975321 223468889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 82 FLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999997 4567999999999999999999999999 999999999999999999999999998753211
Q ss_pred -----------------------------------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCc
Q 011349 207 -----------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 251 (488)
Q Consensus 207 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~ 251 (488)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 124689999999999998999999999999999999999999865
Q ss_pred chhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc--CCCCCCCCHHHHHHH
Q 011349 252 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ--YEPRERPNAKSLVAS 306 (488)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dp~~Rps~~~il~~ 306 (488)
........... ..... ..-+.....++++.+++.+++. .++..||++++|++|
T Consensus 239 ~~~~~~~~~i~-~~~~~-~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETPQETYKKVM-NWKET-LIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCHHHHHHHHH-cCcCc-ccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 43221111100 00000 0000011245678888888654 233456899999998
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=345.52 Aligned_cols=246 Identities=18% Similarity=0.159 Sum_probs=196.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||+|. ..+++.||||++..... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 35788899999999999999 45688999999875321 123468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 205 (488)
|++||+|.+++.+ ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 9999999999863 456899999999999999999999999 99999999999999999999999999752210
Q ss_pred ----------------------------------------------CCccccccCCCCccccccCCcccCCceEeehHHH
Q 011349 206 ----------------------------------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL 239 (488)
Q Consensus 206 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il 239 (488)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 0123588999999999998999999999999999
Q ss_pred HHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC---HHHHHHH
Q 011349 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN---AKSLVAS 306 (488)
Q Consensus 240 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~ 306 (488)
|||++|+.||............. . .......+.....++++.+++.+|+ .+|.+|++ +.+++.|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~-~-~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVI-N-WQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHH-c-cCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 99999999987542211111000 0 0011111112234677888998876 59999987 8888876
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=330.50 Aligned_cols=242 Identities=19% Similarity=0.252 Sum_probs=196.6
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||+|+||+||++.. .+++.||||++...... ..+.+..|+.+++.++|+||+++.+++..+...++||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999994 56889999998754322 234678899999999999999999999999999999999999999
Q ss_pred hhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccc
Q 011349 138 SKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYST 211 (488)
Q Consensus 138 ~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~ 211 (488)
...+... ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++...... ....|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 8877431 3456999999999999999999999999 999999999999999999999999998765432 23467
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||.+.+..++.++|||||||++|||++|+.||................... ...++...+..+.+++.+||+
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~ 237 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLA 237 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999886432111000001111111 112344567889999999999
Q ss_pred CCCCCCC-----CHHHHHHH
Q 011349 292 YEPRERP-----NAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rp-----s~~~il~~ 306 (488)
.||++|| +++++++|
T Consensus 238 ~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 238 KDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCHHHhcCCCCCCHHHHhcC
Confidence 9999999 77888876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=335.12 Aligned_cols=237 Identities=20% Similarity=0.288 Sum_probs=193.5
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++... ....+.+..|..++..+ +||||+++++++..++..++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999995 568889999997542 12334566777777655 7999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 82 DLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence 9999886 3456999999999999999999999999 99999999999999999999999999875432 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|+.||........... +.. ....++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~--~~~~~~~~~~~~~~~ll~~~l~ 232 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS----ILN--DRPHFPRWISKEAKDCLSKLFE 232 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHc--CCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999998875432221111 111 1123344567789999999999
Q ss_pred CCCCCCCCHH-HHHHH
Q 011349 292 YEPRERPNAK-SLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~-~il~~ 306 (488)
.+|.+||++. +++++
T Consensus 233 ~~P~~R~~~~~~l~~h 248 (316)
T cd05592 233 RDPTKRLGVDGDIRQH 248 (316)
T ss_pred CCHHHcCCChHHHHcC
Confidence 9999999875 56554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=337.59 Aligned_cols=241 Identities=17% Similarity=0.246 Sum_probs=195.9
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++.... .....+.+|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 579999999999994 5688999999975432 2234688999999999 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|.+++. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence 9998886 3467999999999999999999999999 99999999999999999999999999875321 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----ccccccccccCCCCChhhHHHHHHHH
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----NFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
|+.|+|||++.+..++.++|||||||++|||+||+.||........... ....+... ....+...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li 236 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKASSVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHHHHH
Confidence 9999999999998999999999999999999999998853211100000 00011111 1123445667899999
Q ss_pred HHhccCCCCCCCC------HHHHHHH
Q 011349 287 SRCLQYEPRERPN------AKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps------~~~il~~ 306 (488)
.+||..||.+||+ +.++++|
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 237 KGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999987 6788776
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=331.25 Aligned_cols=248 Identities=18% Similarity=0.210 Sum_probs=203.1
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
|++++.||+|+||.||++.. .+++.||||++...... ....+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 45678889999999999994 56899999998754322 234578899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---c
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---S 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~ 208 (488)
+++|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 99999998886544457999999999999999999999999 9999999999999999999999999988654332 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..|++.|+|||++.+..++.++|||||||++|||++|..||......... ..+...+.. ....++...+..+.+|+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEVERRVKE-DQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-HHHHHHhhh-cccccCcccCHHHHHHHHH
Confidence 46789999999999888999999999999999999999988653221110 011111111 1122344567789999999
Q ss_pred hccCCCCCCC-----CHHHHHHH
Q 011349 289 CLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rp-----s~~~il~~ 306 (488)
||..||.+|| ++.+++.+
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999 88899887
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=338.28 Aligned_cols=238 Identities=20% Similarity=0.222 Sum_probs=196.4
Q ss_pred ccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 60 SEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.||+|+||.||++.. .+|+.||||++..... .....+.+|++++++++||||+++++++..++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5689999999999874 3588999999975432 223467889999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
+|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 ~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 999999986 3456999999999999999999999999 999999999999999999999999998765433 235
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.||+.|+|||.+.+..++.++|||||||++|||+||+.||........... +... ....+...++.+.+++.+|
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~~li~~~ 232 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTM----ILKA--KLGMPQFLSPEAQSLLRAL 232 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHHHHHHH
Confidence 689999999999988899999999999999999999998865432211111 1111 1123445578899999999
Q ss_pred ccCCCCCCCC-----HHHHHHH
Q 011349 290 LQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps-----~~~il~~ 306 (488)
|+.||++||+ +.+++.+
T Consensus 233 l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 233 FKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred hhcCHhHcCCCCCCCHHHHhCC
Confidence 9999999999 4556554
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-42 Score=324.16 Aligned_cols=247 Identities=23% Similarity=0.319 Sum_probs=205.1
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.++++++||+|+||.||+|...+++.||+|.+.... .....+.+|+.++++++|+||+++++++ ..+..++||||+++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~ 84 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMEN 84 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCC
Confidence 457889999999999999998888999999997654 3456899999999999999999999886 45678999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++....+..+++.++..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05067 85 GSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGA 163 (260)
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCC
Confidence 99999987555567999999999999999999999999 9999999999999999999999999987654221 22
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||++.+..++.++||||||+++|||++ |+.|+......... ..+........+...+.++.+++.+
T Consensus 164 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05067 164 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVI-----QNLERGYRMPRPDNCPEELYELMRL 238 (260)
T ss_pred cccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHH-----HHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 34678999999998889999999999999999999 88877544222111 1111111222334456789999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|++||++++++..|+.
T Consensus 239 ~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 239 CWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HccCChhhCCCHHHHHHHhhc
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=354.63 Aligned_cols=247 Identities=17% Similarity=0.185 Sum_probs=203.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CC-CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DE-DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+.+.||+|+||.||+|.. .+ +..||+|.+..........+.+|+.+|+.++|||||++++++..++..+|||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 3478888999999999999983 34 677999987655433345678899999999999999999999999999999999
Q ss_pred CCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 132 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
++||+|.+++... ...++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999999887532 3457899999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||........... .... .....+...+.++.
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~----~~~~-~~~~~~~~~s~~~~ 300 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQ----VLYG-KYDPFPCPVSSGMK 300 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhC-CCCCCCccCCHHHH
Confidence 234689999999999988999999999999999999999998865422111111 1111 11123344567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||..+|++||++.+++.+
T Consensus 301 ~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 301 ALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHhccChhhCcCHHHHHhC
Confidence 99999999999999999999864
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-42 Score=337.57 Aligned_cols=253 Identities=21% Similarity=0.310 Sum_probs=201.2
Q ss_pred cccccccCCCCCCceEEEEEe-C-----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecC-Cee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-D-----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEG-EER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~~~ 125 (488)
.+++.+.||+|+||.||+|.. . +++.||+|+++..... ..+.+.+|+.++.++ +|+||++++++|... ...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 467888999999999999963 2 2478999999754322 234678899999999 799999999988654 568
Q ss_pred eEEEecCCCCChhhhhccCC-----------------------------------------------------------C
Q 011349 126 LLVAEFMPNETLSKHLFHWE-----------------------------------------------------------N 146 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~-----------------------------------------------------------~ 146 (488)
++||||+++++|.+++.... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999885321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC------CccccccCCCCccc
Q 011349 147 QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEY 220 (488)
Q Consensus 147 ~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~ 220 (488)
.++++..+..++.||+.||.|||+.+ |+||||||+|||+++++.++|+|||+++..... ....++..|+|||+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 36899999999999999999999999 999999999999999999999999999865322 12344678999999
Q ss_pred cccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC
Q 011349 221 LRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299 (488)
Q Consensus 221 ~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 299 (488)
+.+..++.++|||||||++|||++ |..||........ +...+........+...++++.+++.+||+.+|++||+
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs 322 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE----FCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPT 322 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH----HHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 999999999999999999999998 8877754211110 11111111112223345678999999999999999999
Q ss_pred HHHHHHHhchhhc
Q 011349 300 AKSLVASLTPLQK 312 (488)
Q Consensus 300 ~~~il~~l~~~~~ 312 (488)
+.+++++|+.+..
T Consensus 323 ~~ell~~l~~~~~ 335 (337)
T cd05054 323 FSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=337.09 Aligned_cols=241 Identities=17% Similarity=0.240 Sum_probs=195.2
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 579999999999994 5688999999976432 2234678899998877 7999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence 9998886 3457999999999999999999999999 99999999999999999999999999875322 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc----c-ccccccccCCCCChhhHHHHHHHH
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN----F-LMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
|+.|+|||++.+..++.++|||||||++|||+||+.||............ . ..+.. ....++...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~ll 236 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999987531110000000 0 00111 11234455678899999
Q ss_pred HHhccCCCCCCCC------HHHHHHH
Q 011349 287 SRCLQYEPRERPN------AKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps------~~~il~~ 306 (488)
.+||..||.+||+ +.++++|
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 237 KSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999998 4677776
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=345.10 Aligned_cols=245 Identities=18% Similarity=0.139 Sum_probs=197.1
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||++. ..+++.||||++.... ....+.+.+|++++..++||||+++++++.++...|+|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 35778899999999999998 4578999999986432 1223568889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++||+|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 82 FLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999986 3467899999999999999999999999 999999999999999999999999998632110
Q ss_pred -----------------------------------------------CccccccCCCCccccccCCcccCCceEeehHHH
Q 011349 207 -----------------------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLL 239 (488)
Q Consensus 207 -----------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il 239 (488)
....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 023589999999999988999999999999999
Q ss_pred HHHhhCCCCCCcchhhhhhccccccccccccCCCCC--hhhHHHHHHHHHHhccCCCCCC---CCHHHHHHHh
Q 011349 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS--NDDGTELVRLASRCLQYEPRER---PNAKSLVASL 307 (488)
Q Consensus 240 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~R---ps~~~il~~l 307 (488)
|||+||..||.......... .+........++ ...+.++.+++.+||. +|.+| +++.+++.|-
T Consensus 239 ~elltG~~Pf~~~~~~~~~~----~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp 306 (377)
T cd05629 239 FECLIGWPPFCSENSHETYR----KIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHP 306 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHH----HHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence 99999999886542211100 011000001111 1346789999999997 66665 5999999883
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-42 Score=328.28 Aligned_cols=248 Identities=22% Similarity=0.315 Sum_probs=203.1
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+++.||+|+||.||+|... ++..||||.++..... ..+.+.+|+++++.++|+||+++++++......++
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 85 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIM 85 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEE
Confidence 3567788999999999999853 2478999999765533 34689999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeec
Q 011349 128 VAEFMPNETLSKHLFHWE------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 195 (488)
||||+++++|.+++.... ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~ 164 (280)
T cd05049 86 VFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIG 164 (280)
T ss_pred EEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEEC
Confidence 999999999999986421 245889999999999999999999999 9999999999999999999999
Q ss_pred cCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccccc
Q 011349 196 CFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDS 268 (488)
Q Consensus 196 Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 268 (488)
|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++ |..|+.......... .+..
T Consensus 165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~-----~~~~ 239 (280)
T cd05049 165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE-----CITQ 239 (280)
T ss_pred CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHHc
Confidence 99998754322 12234678999999999999999999999999999999 888875432221111 1111
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
......+...+..+.+++.+||..||++||++.++++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 240 GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1112223456788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=336.49 Aligned_cols=242 Identities=20% Similarity=0.259 Sum_probs=198.2
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCC-CCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRS-ERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 130 (488)
+.+++.||+|+||.||+|.. .+++.||||++.... ....+.+..|+.++..++| ++|+++++++...+..|+|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 57788999999999999994 457889999987542 2234568889999999976 458889999988899999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----C
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----G 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 206 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 82 ~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05587 82 YVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTT 158 (324)
T ss_pred CCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCce
Confidence 999999999886 3456899999999999999999999999 99999999999999999999999999875321 1
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .+.. ....++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~----~i~~--~~~~~~~~~~~~~~~li 232 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ----SIME--HNVSYPKSLSKEAVSIC 232 (324)
T ss_pred eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH----HHHc--CCCCCCCCCCHHHHHHH
Confidence 23468999999999999899999999999999999999999886543221111 1111 11233445677899999
Q ss_pred HHhccCCCCCCCCH-----HHHHHH
Q 011349 287 SRCLQYEPRERPNA-----KSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~-----~~il~~ 306 (488)
.+||..||.+|++. .++++|
T Consensus 233 ~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 233 KGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 99999999999976 677665
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-42 Score=337.82 Aligned_cols=195 Identities=18% Similarity=0.204 Sum_probs=174.6
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-C-----CCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-S-----ERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~l 127 (488)
.|.|++.||+|+||.|.+|. ..+++.||||+++... .-..+...|+.+|..|+ | -|+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 55778999999999999999 6779999999998654 33457788999999997 4 489999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC--CCCeeccCCCcccCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD--GNPRLSCFGLMKNSRD 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~--~~~kl~Dfgla~~~~~ 205 (488)
|+|.+. -+|.++|+...-..|+...+..|+.||+.||.+||+.+ |||+||||+||||.+- ..+||+|||.+.....
T Consensus 266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 999995 89999999877788999999999999999999999999 9999999999999643 4799999999987655
Q ss_pred CC-ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcc
Q 011349 206 GK-SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH 252 (488)
Q Consensus 206 ~~-~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~ 252 (488)
.- ++..+..|+|||++.|.+|+.+.||||||||++||+||.+.|++.
T Consensus 344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 43 566789999999999999999999999999999999999888875
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=319.93 Aligned_cols=250 Identities=19% Similarity=0.205 Sum_probs=210.4
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+++..++++.||.|.-|+||++... ++..+|+|++.+..... ..+.+.|-+||+.++||.++.+|..|..+...|+
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCL 154 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEE
Confidence 4556688999999999999999954 46889999998665332 3467889999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC---
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR--- 204 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 204 (488)
|||||+||+|..+.++..+..|++..+..++.+|+-||.|||-.| ||+|||||+||||-++|++-|+||.|+....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 999999999999998888889999999999999999999999999 9999999999999999999999999853210
Q ss_pred ---------------------------------C------------------------CCccccccCCCCccccccCCcc
Q 011349 205 ---------------------------------D------------------------GKSYSTNLAFTPPEYLRTGRVI 227 (488)
Q Consensus 205 ---------------------------------~------------------------~~~~~~t~~y~aPE~~~~~~~~ 227 (488)
. ..+++||-.|+|||++.|..-+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0 0124578899999999999999
Q ss_pred cCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC----HHHH
Q 011349 228 PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN----AKSL 303 (488)
Q Consensus 228 ~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~i 303 (488)
.++|.|+|||++|||+.|..||.+.... ..+..++...+.-+-.+..+..+.+||.++|.+||.+|.. +.||
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~----~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNK----ETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCch----hhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 9999999999999999999999876332 2333333333322222356788999999999999999987 8888
Q ss_pred HHH
Q 011349 304 VAS 306 (488)
Q Consensus 304 l~~ 306 (488)
-+|
T Consensus 390 K~H 392 (459)
T KOG0610|consen 390 KRH 392 (459)
T ss_pred hcC
Confidence 776
|
|
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=329.03 Aligned_cols=251 Identities=20% Similarity=0.261 Sum_probs=202.9
Q ss_pred CCcccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
++.++++++||+|+||.||+|... .+..||||+++...... .+.+.+|+.++..++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 345677889999999999999842 24779999998554222 35688999999999999999999999999999
Q ss_pred eEEEecCCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 126 LLVAEFMPNETLSKHLFHW--------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++++||+.+++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCc
Confidence 9999999999999988521 1235889999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++...... ...+++.|+|||.+.++.++.++|||||||++|||+| |..|+....... ...
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~~ 237 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD-----VIE 237 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHH
Confidence 9999999987654322 2234678999999988889999999999999999998 665654432211 111
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
.+........+..++..+.+++.+||+.+|.+||++.+|+..|+.
T Consensus 238 ~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111111223455677889999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-42 Score=328.82 Aligned_cols=250 Identities=22% Similarity=0.255 Sum_probs=194.7
Q ss_pred cccccccCCCCCCceEEEEEe-C-CCcEEEEEEccCCCCC--ChHHHHHHHHHHhhc---CCCCCcccccceec-----C
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-D-EDRWIAVKRFNRSAWP--DSRQFLEEARAVGLL---RSERLVNLIGCCCE-----G 122 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~~~~~~~~-----~ 122 (488)
.|.+++.||+|+||.||+|.. . +++.||||+++..... ....+.+|+.+++.+ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 467888999999999999985 3 4678999998754322 234567788877766 69999999998852 4
Q ss_pred CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
...++||||+. ++|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 56899999996 69999887545566999999999999999999999999 99999999999999999999999999876
Q ss_pred CCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------cccc---c
Q 011349 203 SRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NFLM---L 265 (488)
Q Consensus 203 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----------~~~~---~ 265 (488)
.... ....+|+.|+|||.+.+..++.++|||||||++|||++|++||........... .+.. .
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 239 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence 5432 244678999999999888899999999999999999999988865422110000 0000 0
Q ss_pred cccccC-------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 MDSCLE-------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... .......+..+.+++.+||+.||++|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000000 00112345778999999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-42 Score=340.19 Aligned_cols=246 Identities=20% Similarity=0.193 Sum_probs=199.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
-..|.+++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++.++...++|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 34678889999999999999995 468899999986422 12344688999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||++||+|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 122 ~Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 122 MEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred EcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence 99999999999985 345899999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccccCCCCccccccC----CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC--hh
Q 011349 207 ---KSYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS--ND 277 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~----~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 277 (488)
....||+.|+|||++.+. .++.++|||||||++|||+||+.||........ ...+........++ ..
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~ 273 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT----YSKIMDHKNSLNFPEDVE 273 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCcccCCCCccc
Confidence 245689999999999753 378899999999999999999999875432111 11111111111122 23
Q ss_pred hHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRE--RPNAKSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~--Rps~~~il~~ 306 (488)
.+..+.+++.+||..+|.+ |+++.++++|
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 274 ISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 4678899999999855543 8999999998
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-42 Score=334.04 Aligned_cols=237 Identities=19% Similarity=0.251 Sum_probs=194.4
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+|..||||+++... ......+..|..++... +||||+++++++.+.+..++||||+.||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 579999999999995 468899999997542 12345677788888765 8999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||+++.... .....|
T Consensus 82 ~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05620 82 DLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG 158 (316)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence 9999886 3456899999999999999999999999 99999999999999999999999999874321 234568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|+.||............ .. ....++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI----RV--DTPHYPRWITKESKDILEKLFE 232 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH----Hh--CCCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999998654332211110 00 1122333456789999999999
Q ss_pred CCCCCCCCHH-HHHHH
Q 011349 292 YEPRERPNAK-SLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~-~il~~ 306 (488)
.||++||++. +++.|
T Consensus 233 ~dP~~R~~~~~~~~~h 248 (316)
T cd05620 233 RDPTRRLGVVGNIRGH 248 (316)
T ss_pred CCHHHcCCChHHHHcC
Confidence 9999999984 66654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-42 Score=323.78 Aligned_cols=251 Identities=18% Similarity=0.153 Sum_probs=202.5
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..++.+++.||+|+||.||+|.. .+++.||+|++..........+.+|+.++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 34578889999999999999994 57889999999765544556788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+++++|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++...... .
T Consensus 88 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 88 CGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 99999999886 3457899999999999999999999999 999999999999999999999999998865422 2
Q ss_pred ccccccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 SYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...+++.|+|||.+. ...++.++|||||||++|||++|+.|+.................... ........+..+.+
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 243 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPP-KLKDKTKWSSTFHN 243 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCC-CCccccccCHHHHH
Confidence 346788999999884 34578899999999999999999987743311100000000000000 00112234678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+||..+|++|||+++++++|
T Consensus 244 li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 244 FVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHhhCChhhCcCHHHHhcCC
Confidence 99999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=338.40 Aligned_cols=247 Identities=21% Similarity=0.321 Sum_probs=194.5
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC-----CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~l 127 (488)
|.+.+.||+|+||.||+|. ..++..||||+++... ......+.+|+.+++.++||||+++++++... ...++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 5678889999999999999 4578999999987432 22345688999999999999999999987543 24799
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 82 VFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFNDT 157 (338)
T ss_pred EEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence 999995 78998886 4456999999999999999999999999 999999999999999999999999999754321
Q ss_pred ------CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh-------------------hc
Q 011349 207 ------KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-------------------RG 259 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~-------------------~~ 259 (488)
....+|+.|+|||++.+ ..++.++|||||||++|||+||++||........ ..
T Consensus 158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 237 (338)
T cd07859 158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRN 237 (338)
T ss_pred CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 23468899999999876 6789999999999999999999988865321100 00
Q ss_pred cccccccc---cccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 KNFLMLMD---SCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 ~~~~~~~~---~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
......+. ......+ .+..++.+.+++.+||..||++|||++++++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000000 0000000 01245678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-44 Score=309.08 Aligned_cols=247 Identities=21% Similarity=0.222 Sum_probs=203.9
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+-++||+|.|++||++. ..+|+.+|+|+++... ..+.+++.+|+++.+.|+|||||++.+........|+|+|+|
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m 92 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 92 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecc
Confidence 3555678999999999998 5679999999987543 235678999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec---CCCCCeeccCCCcccCCCCC--
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~~-- 207 (488)
.|++|..-|. .+-.+++..+-..+.||+++|.|+|.++ |||||+||.|+|+. ....+||+|||+|.....+.
T Consensus 93 ~G~dl~~eIV--~R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~ 169 (355)
T KOG0033|consen 93 TGGELFEDIV--AREFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW 169 (355)
T ss_pred cchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence 9999987665 3355788899999999999999999999 99999999999995 33468999999999887543
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...|||+|||||++...+|+..+|||+.||+||-|+.|.+||++.....+-.+......+ ..++.-+.++++..+|+
T Consensus 170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd--~~~~~w~~is~~Ak~Lv 247 (355)
T KOG0033|consen 170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD--YPSPEWDTVTPEAKSLI 247 (355)
T ss_pred ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC--CCCcccCcCCHHHHHHH
Confidence 457899999999999999999999999999999999999999885433322222111111 11112224567899999
Q ss_pred HHhccCCCCCCCCHHHHHHHh
Q 011349 287 SRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l 307 (488)
.+||..||.+|.|+.|.|+|-
T Consensus 248 rrML~~dP~kRIta~EAL~Hp 268 (355)
T KOG0033|consen 248 RRMLTVNPKKRITADEALKHP 268 (355)
T ss_pred HHHhccChhhhccHHHHhCCc
Confidence 999999999999999999873
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-42 Score=334.98 Aligned_cols=242 Identities=19% Similarity=0.264 Sum_probs=198.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+++++.||+|+||.||+|.. .+++.||||+++.... .....+..|..++..+ +|++|+++++++...+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 46788899999999999995 4578999999875432 2234567788888887 58999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----C
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----G 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 206 (488)
|+++|+|.+.+. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 82 ~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~ 158 (323)
T cd05616 82 YVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTT 158 (323)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcc
Confidence 999999999886 3456999999999999999999999999 99999999999999999999999999875432 2
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .+... ...++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~s~~~~~li 232 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ----SIMEH--NVAYPKSMSKEAVAIC 232 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHH----HHHhC--CCCCCCcCCHHHHHHH
Confidence 24568999999999999999999999999999999999999886543222111 11111 1223445678899999
Q ss_pred HHhccCCCCCCCCH-----HHHHHH
Q 011349 287 SRCLQYEPRERPNA-----KSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~-----~~il~~ 306 (488)
.+||+.+|.+|++. .+++.|
T Consensus 233 ~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 233 KGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHcccCHHhcCCCCCCCHHHHhcC
Confidence 99999999999974 666655
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-42 Score=321.80 Aligned_cols=245 Identities=24% Similarity=0.323 Sum_probs=200.9
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++.+.+.||+|+||.||+|.+.++..+|||++.... .....+.+|+.+++.++||||+++++++...+..++||||++|
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 356778899999999999998777789999987543 2346788999999999999999999999988999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-----c
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-----Y 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-----~ 209 (488)
++|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||+++...+... .
T Consensus 84 ~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 161 (256)
T cd05059 84 GCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGT 161 (256)
T ss_pred CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceecccccccccCCC
Confidence 9999998642 346899999999999999999999999 99999999999999999999999999876543221 1
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||.+.+..++.++||||||+++|||+| |..|+......... ..+........+...+.++.+++.+
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05059 162 KFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV-----ESVSAGYRLYRPKLAPTEVYTIMYS 236 (256)
T ss_pred CCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH-----HHHHcCCcCCCCCCCCHHHHHHHHH
Confidence 22357999999998889999999999999999999 67666433211111 1111111222334467889999999
Q ss_pred hccCCCCCCCCHHHHHHHh
Q 011349 289 CLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l 307 (488)
||..+|++|||+.++++.|
T Consensus 237 cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 237 CWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HhcCChhhCcCHHHHHHHh
Confidence 9999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=321.42 Aligned_cols=247 Identities=25% Similarity=0.343 Sum_probs=203.4
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.++++++||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+|++++++++. ....++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 4577889999999999999987888899999976543 4567999999999999999999999874 5668999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++.......+++.++..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05070 85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCC
Confidence 99999987544556899999999999999999999999 9999999999999999999999999987654322 12
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||.+.+..++.++||||||+++|+|++ |..|+........ ...+........+...+..+.+++.+
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05070 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV-----LEQVERGYRMPCPQDCPISLHELMLQ 238 (260)
T ss_pred CCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 34567999999988889999999999999999999 7777654321111 11111112223344567889999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|++|||+.++.+.|+.
T Consensus 239 ~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 239 CWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HcccCcccCcCHHHHHHHHhc
Confidence 999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-42 Score=326.69 Aligned_cols=243 Identities=17% Similarity=0.219 Sum_probs=194.6
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||+|+||.||++.. .+|+.||+|++...... ....+..|++++++++||||+++++++..+...++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999994 56899999998643211 234566799999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---ccccccC
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---SYSTNLA 214 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~~~~t~~ 214 (488)
.+++.......+++..+..++.||+.||.|||+.+ ++||||||+||++++++.++|+|||++....... ...++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 98886545556899999999999999999999999 9999999999999999999999999987654432 3467899
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|+|||++.+..++.++|||||||++|||++|+.|+...................... ......+.++.+++.+||+.||
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P 238 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKP 238 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCH
Confidence 999999998889999999999999999999998876432111100000111111111 0112356789999999999999
Q ss_pred CCCCCHHHHHHH
Q 011349 295 RERPNAKSLVAS 306 (488)
Q Consensus 295 ~~Rps~~~il~~ 306 (488)
++||++.++++.
T Consensus 239 ~~R~~~~~~~~~ 250 (277)
T cd05607 239 EDRLGSREKNDD 250 (277)
T ss_pred hhCCCCccchhh
Confidence 999999766544
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-42 Score=328.25 Aligned_cols=253 Identities=22% Similarity=0.291 Sum_probs=206.1
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++.+.+.||+|+||.||+|... ++..|++|.+........+.+.+|+.++++++|+||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 3466788999999999999732 3456999998766544456799999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCee
Q 011349 129 AEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 194 (488)
|||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+||+++.++.++|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l 164 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKI 164 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEE
Confidence 99999999999986421 234899999999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccc
Q 011349 195 SCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMD 267 (488)
Q Consensus 195 ~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 267 (488)
+|||++...... ....++..|+|||++.+..++.++|||||||++|||+| |..|+.......... .+.
T Consensus 165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-----~~~ 239 (291)
T cd05094 165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE-----CIT 239 (291)
T ss_pred CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHh
Confidence 999998755332 22345678999999998889999999999999999999 887764432211110 011
Q ss_pred cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 268 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.......+...+..+.+++.+||+.+|.+|||+.++++.|+.+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 240 QGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111122334567899999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-42 Score=340.79 Aligned_cols=243 Identities=16% Similarity=0.184 Sum_probs=195.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..|.+++.||+|+||.||++. ..+++.||||... ...+.+|++++++++||||+++++++..+...++|||++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 457899999999999999999 4578899999754 245789999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----CC
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-----GK 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-----~~ 207 (488)
. ++|..++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 166 ~-~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 241 (391)
T PHA03212 166 K-TDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY 241 (391)
T ss_pred C-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence 5 78888886 3456899999999999999999999999 99999999999999999999999999875322 12
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh--------hh----h--c-----------ccc
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD--------LI----R--G-----------KNF 262 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~--------~~----~--~-----------~~~ 262 (488)
...||+.|+|||++.+..++.++|||||||++|||+||..|+...... .. . + ...
T Consensus 242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~ 321 (391)
T PHA03212 242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL 321 (391)
T ss_pred cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence 357899999999999889999999999999999999999776432100 00 0 0 000
Q ss_pred cccc----cccc-----CCCC--ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLM----DSCL-----EGHF--SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~----~~~~-----~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... .... +..+ ....+.++.+|+.+||+.||.+|||+.+++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000 0000 0000 01246689999999999999999999999986
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=321.89 Aligned_cols=248 Identities=21% Similarity=0.285 Sum_probs=202.6
Q ss_pred ccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+.+.+.||+|+||.||+|.+.. ...||||.++..... ....|.+|+.++++++||||+++++.+...+..++|||
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 85 (266)
T cd05033 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE 85 (266)
T ss_pred ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence 4567788999999999998642 457999998765422 24578899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||+++......
T Consensus 86 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (266)
T cd05033 86 YMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY 163 (266)
T ss_pred cCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence 9999999999864 2347899999999999999999999999 9999999999999999999999999998764211
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+......... ..+......+.+...+..+.
T Consensus 164 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~ 238 (266)
T cd05033 164 TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVI-----KAVEDGYRLPPPMDCPSALY 238 (266)
T ss_pred eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHH
Confidence 1233568999999998889999999999999999998 88776543222111 11111112223345678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+++.+||+.+|++||++.+++++|..+
T Consensus 239 ~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 239 QLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-42 Score=333.23 Aligned_cols=237 Identities=19% Similarity=0.275 Sum_probs=196.6
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++... ......+.+|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999995 458889999997542 22345677899999888 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++.++..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 82 DLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence 9998886 3457999999999999999999999999 99999999999999999999999999875322 123468
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........... +... ...++...+..+.+++.+||.
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~~~l~ 232 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS----ILED--EVRYPRWLSKEAKSILKSFLT 232 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHH----HHcC--CCCCCCcCCHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999998865432211111 1110 112334457889999999999
Q ss_pred CCCCCCCCH-----HHHHHH
Q 011349 292 YEPRERPNA-----KSLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~-----~~il~~ 306 (488)
.||.+||++ .+++.+
T Consensus 233 ~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 233 KNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCHHHcCCCCCCCHHHHhcC
Confidence 999999999 888876
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-42 Score=332.71 Aligned_cols=237 Identities=20% Similarity=0.260 Sum_probs=193.8
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++... ......+..|..++... +||||+++++++.+.+..++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 579999999999995 458899999997542 12345567788888765 8999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|.+++. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05619 82 DLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG 158 (316)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence 9999986 3456899999999999999999999999 99999999999999999999999999875322 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|+.||........... +.. ....++...+.++.+++.+||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~-----i~~-~~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS-----IRM-DNPCYPRWLTREAKDILVKLFV 232 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHH-----HHh-CCCCCCccCCHHHHHHHHHHhc
Confidence 9999999999988999999999999999999999998865432211110 000 0112333456789999999999
Q ss_pred CCCCCCCCHH-HHHHH
Q 011349 292 YEPRERPNAK-SLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~-~il~~ 306 (488)
.||.+||++. +++.+
T Consensus 233 ~~P~~R~~~~~~l~~h 248 (316)
T cd05619 233 REPERRLGVKGDIRQH 248 (316)
T ss_pred cCHhhcCCChHHHHcC
Confidence 9999999997 66554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-42 Score=333.75 Aligned_cols=237 Identities=20% Similarity=0.237 Sum_probs=191.8
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHH-HHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEAR-AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+|+.||||++..... .....+..|.. +++.++||||+++++++...+..++||||++||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 579999999999995 5689999999875321 12334555555 467889999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence 9999886 4567999999999999999999999999 99999999999999999999999999875322 223468
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|..||........... +.... ...+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~----i~~~~--~~~~~~~~~~~~~li~~~l~ 232 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDN----ILNKP--LRLKPNISVSARHLLEGLLQ 232 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHH----HHcCC--CCCCCCCCHHHHHHHHHHhh
Confidence 9999999999998999999999999999999999998865432221111 11111 11233456789999999999
Q ss_pred CCCCCCCCHH----HHHHH
Q 011349 292 YEPRERPNAK----SLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~----~il~~ 306 (488)
.||.+||++. +++.+
T Consensus 233 ~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 233 KDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred cCHHhCCCCCCCHHHHHcC
Confidence 9999999884 66554
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=320.95 Aligned_cols=248 Identities=24% Similarity=0.312 Sum_probs=202.1
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.++||+|+||.||+|...++..||||+++... ...+.+.+|+.++++++||||+++++++. ....++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (262)
T cd05071 7 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSK 84 (262)
T ss_pred HeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCC
Confidence 467889999999999999997666679999997543 24567899999999999999999999874 4568999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++...... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~ 163 (262)
T cd05071 85 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 163 (262)
T ss_pred CcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccccCC
Confidence 99999997544456899999999999999999999999 9999999999999999999999999987654322 22
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||+..+..++.++|||||||++|||+| |..|+.......... ..........+...+..+.+++.+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~ 238 (262)
T cd05071 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-----QVERGYRMPCPPECPESLHDLMCQ 238 (262)
T ss_pred cccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHH-----HHhcCCCCCCccccCHHHHHHHHH
Confidence 34567999999988889999999999999999999 666654432211111 011111112334567889999999
Q ss_pred hccCCCCCCCCHHHHHHHhchh
Q 011349 289 CLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~ 310 (488)
||+.+|++||++.++++.|+..
T Consensus 239 ~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 239 CWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HccCCcccCCCHHHHHHHHHHh
Confidence 9999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-42 Score=327.63 Aligned_cols=252 Identities=23% Similarity=0.292 Sum_probs=204.3
Q ss_pred ccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+.+.||+|+||.||++.. .++..+|+|.+..........+.+|+.++++++||||+++++++...+..++||
T Consensus 7 ~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 86 (288)
T cd05093 7 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVF 86 (288)
T ss_pred eeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence 46778889999999999974 234568999987655344567999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCC
Q 011349 130 EFMPNETLSKHLFHWE-----------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 198 (488)
||+++++|.+++.... ...+++.+++.++.|++.||.|||+.+ ++||||||+||++++++.++|+|||
T Consensus 87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg 165 (288)
T cd05093 87 EYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFG 165 (288)
T ss_pred EcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccCC
Confidence 9999999999986321 235899999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccC
Q 011349 199 LMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 199 la~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
+++...... ...++..|+|||++.+..++.++|||||||++|+|+| |..|+........... +. ....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~----i~-~~~~ 240 (288)
T cd05093 166 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC----IT-QGRV 240 (288)
T ss_pred ccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HH-cCCc
Confidence 987653321 2234678999999998889999999999999999999 7777654322111110 00 0011
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
...+...+.++.+++.+||+.+|.+|||+.++++.|+.+.+.
T Consensus 241 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 241 LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 112234567899999999999999999999999999988865
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=320.63 Aligned_cols=248 Identities=23% Similarity=0.318 Sum_probs=203.0
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccccccee-cCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC-EGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~ 132 (488)
..+.+.+.||+|+||.||++.. .|..||+|.++... ..+.+.+|+.++++++|+|++++++++. .++..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 3567788899999999999986 47779999986543 3567899999999999999999999764 456789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-cccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-SYST 211 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-~~~~ 211 (488)
++++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||++++++.+||+|||+++...... ...+
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 161 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 161 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCCcc
Confidence 9999999997544456899999999999999999999999 9999999999999999999999999988654332 3344
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
+..|+|||++.+..++.++|||||||++|||++ |+.|+......... ..+........+..+++.+.+++.+||
T Consensus 162 ~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l 236 (256)
T cd05082 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-----PRVEKGYKMDAPDGCPPVVYDVMKQCW 236 (256)
T ss_pred ceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHhcCCCCCCCCCCCHHHHHHHHHHh
Confidence 668999999988889999999999999999998 88776543222111 111111122334456788999999999
Q ss_pred cCCCCCCCCHHHHHHHhchh
Q 011349 291 QYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~l~~~ 310 (488)
..+|++|||+.++++.|+.+
T Consensus 237 ~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 237 HLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred cCChhhCcCHHHHHHHHhcC
Confidence 99999999999999998754
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=320.16 Aligned_cols=240 Identities=22% Similarity=0.277 Sum_probs=196.3
Q ss_pred cCCCCCCceEEEEEe---CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV---DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
+||+|+||.||+|.+ .++..||||+++..... ..+.+.+|+.+++.++||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 579999999999974 35788999998754322 2457899999999999999999999874 55779999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-------
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS------- 208 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~------- 208 (488)
+|.+++. ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 9999986 3456899999999999999999999999 99999999999999999999999999986543321
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+++.|+|||.+....++.++|||||||++|||+| |..||....... ....+........+...++++.+++.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE-----VTQMIESGERMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 123478999999988889999999999999999998 887775432211 11112222223345556788999999
Q ss_pred HhccCCCCCCCCHHHHHHHhch
Q 011349 288 RCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~ 309 (488)
+||+.||++||++.+|...|+.
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhc
Confidence 9999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=324.17 Aligned_cols=251 Identities=22% Similarity=0.322 Sum_probs=200.5
Q ss_pred cccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 128 (488)
.+++.||+|+||+||++.+ .++..||+|.++.... .....+.+|+++++.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 5778899999999988652 3577899999976542 2345788999999999999999999987653 358999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++++|.+++. ...+++.++..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++......
T Consensus 87 ~e~~~~~~l~~~~~---~~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLP---KHKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 99999999999985 345999999999999999999999999 9999999999999999999999999988654322
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh---hhhc-------cccccccccccC
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD---LIRG-------KNFLMLMDSCLE 271 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~---~~~~-------~~~~~~~~~~~~ 271 (488)
...++..|+|||.+.+..++.++||||||+++|||+||..|+...... .... ............
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 123456799999998888999999999999999999999876432111 0000 001111111222
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
...+...+..+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 2334556789999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-42 Score=336.26 Aligned_cols=247 Identities=17% Similarity=0.155 Sum_probs=199.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||++. ..+++.||||+++.... .....+.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 35778889999999999999 45789999999975432 234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++||+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 82 YQPGGDLLSLLNR-YEDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 9999999999964 2357999999999999999999999999 9999999999999999999999999997654332
Q ss_pred --ccccccCCCCccccc------cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 208 --SYSTNLAFTPPEYLR------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~------~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
...||+.|+|||++. +..++.++|||||||++|||++|+.||........... +... ......+.....+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~-i~~~-~~~~~~~~~~~~~ 237 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNN-IMNF-QRFLKFPEDPKVS 237 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHH-HHcC-CCccCCCCCCCCC
Confidence 236789999999986 45678899999999999999999998865422111110 0000 0001111112356
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.+|+.+||. +|.+|||+.+++.|
T Consensus 238 ~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 238 SDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 789999999997 99999999999987
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=313.08 Aligned_cols=241 Identities=17% Similarity=0.257 Sum_probs=208.3
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.++++||+|+||.||+|. .++|+.||||.+..+. +.+++.+|+.+|+++..|+||++||.+.....+++|||||--|
T Consensus 36 Di~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 36 DIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence 567899999999999999 5679999999987654 6789999999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~ 211 (488)
++.++++- ++.+|++.++..+++..++||+|||... -||||||..|||++-+|++||+|||++....+. .+..|
T Consensus 114 SiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIG 191 (502)
T KOG0574|consen 114 SISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIG 191 (502)
T ss_pred cHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcccc
Confidence 99998864 6778999999999999999999999998 899999999999999999999999999876553 46789
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC--CChhhHHHHHHHHHHh
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FSNDDGTELVRLASRC 289 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~c 289 (488)
|+.|||||++..-.|+.++||||||++..||..|++|+... ......-+++....+. -|...+.++.+++..|
T Consensus 192 TPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI-----HPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 192 TPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI-----HPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred CcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc-----cccceeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 99999999999989999999999999999999999775432 1111111222222222 3456788999999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|.+.|++|-|+.++++|
T Consensus 267 LiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 267 LIKKPEERKTALRLCEH 283 (502)
T ss_pred hcCCHHHHHHHHHHhhh
Confidence 99999999999999987
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=319.20 Aligned_cols=241 Identities=24% Similarity=0.356 Sum_probs=196.2
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
.||+|+||.||+|.. .+++.||+|.+...... ....+.+|++++++++||||+++++++......++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 579999999999994 57889999988654322 2457999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc------cccc
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS------YSTN 212 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~------~~~t 212 (488)
+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........ ...+
T Consensus 82 ~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 159 (252)
T cd05084 82 TFLRT-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP 159 (252)
T ss_pred HHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence 99863 3346899999999999999999999999 99999999999999999999999999876443211 1223
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
..|+|||.+.++.++.++|||||||++|||++ |..|+....... ....+........+...+..+.+++.+||.
T Consensus 160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 234 (252)
T cd05084 160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-----TREAIEQGVRLPCPELCPDAVYRLMERCWE 234 (252)
T ss_pred eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-----HHHHHHcCCCCCCcccCCHHHHHHHHHHcC
Confidence 56999999998889999999999999999998 666553321111 111111112223444557889999999999
Q ss_pred CCCCCCCCHHHHHHHhc
Q 011349 292 YEPRERPNAKSLVASLT 308 (488)
Q Consensus 292 ~dp~~Rps~~~il~~l~ 308 (488)
.+|++|||+.++++.|.
T Consensus 235 ~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 235 YDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CChhhCcCHHHHHHHHh
Confidence 99999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=321.02 Aligned_cols=253 Identities=16% Similarity=0.220 Sum_probs=206.0
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+.+.||+|+||.||+|. ..+++.||||.++.....+ ...+.+|+.+++.++||||+++++++...+..++|||
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence 45778889999999999999 4578999999886533222 3468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 131 FMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|+++++|.+++... ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 99999999888532 2355899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc-cCCCCChhhHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC-LEGHFSNDDGTELV 283 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 283 (488)
...+++.|+|||.+.+..++.++||||||+++|||++|+.|+.....+... ....+... .....+...+..+.
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08228 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS---LCQKIEQCDYPPLPTEHYSEKLR 238 (267)
T ss_pred HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH---HHHHHhcCCCCCCChhhcCHHHH
Confidence 346788999999998888999999999999999999999987543221111 01111111 11112234567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
+++.+||..+|++||++.++++.++.++
T Consensus 239 ~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 239 ELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 9999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=325.65 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=202.1
Q ss_pred CCcccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
+....+.++||+|+||.||++... ++..||+|.+..........+.+|+++++.++|+||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 344567889999999999999632 35679999987655444568999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 127 LVAEFMPNETLSKHLFHWEN-------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
+||||+++++|.+++..... ..+++..+..++.||+.||.|||+.+ ++||||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEE
Confidence 99999999999999864321 35899999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccc
Q 011349 194 LSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 194 l~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 266 (488)
|+|||++....... ...+++.|+|||.+.+..++.++|||||||++|||++ |.+|+........ . ...
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~----~-~~~ 237 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA----I-ECI 237 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH----H-HHH
Confidence 99999987543221 2234678999999998889999999999999999998 7776643221111 0 001
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
........+..+++.+.+++.+||+.||.+||++.+|++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 238 TQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111112233455678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=327.46 Aligned_cols=252 Identities=18% Similarity=0.252 Sum_probs=208.4
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..++-...+.+++.||+|+||.||+|. ..+++.||+|.+........+.+.+|+.+++.++|+||+++++.+..+...+
T Consensus 14 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~ 93 (296)
T cd06654 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 93 (296)
T ss_pred ccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 344445567888899999999999999 4568899999998766556678999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||++|++|.+++. ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 94 lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 94 VVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred EeecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 9999999999999984 346899999999999999999999999 999999999999999999999999998764432
Q ss_pred ----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 ----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||.......... ............+...+..+
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l 246 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY---LIATNGTPELQNPEKLSAIF 246 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH---HHhcCCCCCCCCccccCHHH
Confidence 23467889999999998889999999999999999999999886542211100 00011111112233456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+||..+|++||++.+++.+
T Consensus 247 ~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 247 RDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHHCcCCcccCcCHHHHhhC
Confidence 999999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=327.41 Aligned_cols=256 Identities=21% Similarity=0.260 Sum_probs=203.3
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCc--EEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDR--WIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
|+++.+.+.||+|+||.||+|.+. ++. .+|+|.++.... .....+.+|+.++.++ +||||+++++++...+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 455678888999999999999953 454 468887764332 2345788999999999 89999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 128 VAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
||||+++++|.+++.... ...+++.+++.++.||+.||.|||+.+ ++||||||+|||++.++.+|
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcEE
Confidence 999999999999986421 235889999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccc
Q 011349 194 LSCFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSC 269 (488)
Q Consensus 194 l~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 269 (488)
|+|||++...... .....+..|+|||.+.+..++.++|||||||++|||+| |..||......... ..+...
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-----~~~~~~ 239 (303)
T cd05088 165 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-----EKLPQG 239 (303)
T ss_pred eCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHH-----HHHhcC
Confidence 9999998643211 11223567999999988889999999999999999998 88776543221111 111111
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.....+...+..+.+|+.+||+.+|++||++.+++..|..+....
T Consensus 240 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 240 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 122233345678999999999999999999999999998876554
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=320.22 Aligned_cols=255 Identities=16% Similarity=0.195 Sum_probs=207.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+.+.+.||.|+||.||+|. ..++..||||.+...... ....+.+|+.+++.++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 345778889999999999999 467899999988654322 2347889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 130 EFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||+++++|.+++... ....+++.+++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999999988632 3456899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...++..|+|||.+.+..++.++||||||+++|+|++|..|+.....+...... .+.........+...+..+.
T Consensus 161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--KIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh--hhhcCCCCCCCcccccHHHH
Confidence 346788999999998888999999999999999999999887543221111100 01011111111234567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
+++.+||..+|.+|||+.+|++.++++.
T Consensus 239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 239 QLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 9999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=345.33 Aligned_cols=251 Identities=18% Similarity=0.160 Sum_probs=207.6
Q ss_pred cccccccCCCCCCceEEEEEeCCC-cEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccce-ec------CCee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDED-RWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCC-CE------GEER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~-~~------~~~~ 125 (488)
...|.+.|.+|||+.||+|....+ ..||+|++-..+....+.+.+|+++|++|+ |+|||.+++.. .. .-.+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 457788899999999999996554 899999987666666788999999999996 99999999932 21 1257
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
+|.||||.||.|-+++..+....|++.++++|+.|+++|+++||... ||||||||-+||||+.+|..||||||.+....
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~ 197 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKI 197 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccccc
Confidence 89999999999999998665666999999999999999999999975 69999999999999999999999999987433
Q ss_pred CCC-------------ccccccCCCCcccc---ccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc
Q 011349 205 DGK-------------SYSTNLAFTPPEYL---RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 268 (488)
Q Consensus 205 ~~~-------------~~~~t~~y~aPE~~---~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 268 (488)
... ....|+.|+|||++ .+...+.|+|||+|||+||-|+....||...+. ..++..
T Consensus 198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--------laIlng 269 (738)
T KOG1989|consen 198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--------LAILNG 269 (738)
T ss_pred CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--------eeEEec
Confidence 221 12458999999987 457789999999999999999999999865422 222222
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
...-+..+..+..+.+||..||+.+|.+||++-+++..+..+...
T Consensus 270 ~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 270 NYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred cccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 222222345688999999999999999999999999998877644
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=318.19 Aligned_cols=245 Identities=21% Similarity=0.274 Sum_probs=204.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.+.+.||+|++|.||+|.. .+++.|++|.+..... .....+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 45667889999999999995 4688999999875432 23567899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
+|++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++...... .
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 9999999997644567999999999999999999999999 9999999999999999999999999988654432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+++.|+|||++.+..++.++|||||||++++|+||+.|+........... ... ......+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08529 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK----IIR-GVFPPVSQMYSQQLAQLIDQ 235 (256)
T ss_pred cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHc-CCCCCCccccCHHHHHHHHH
Confidence 4578899999999988899999999999999999999998765432111111 111 11122333556789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||+.+|++||++.+++.+
T Consensus 236 ~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 236 CLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HccCCcccCcCHHHHhhC
Confidence 999999999999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=322.28 Aligned_cols=251 Identities=18% Similarity=0.244 Sum_probs=199.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCc----EEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDR----WIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++++++.||+|+||+||+|.+ .+++ .|++|.+...... ....+..|+..+.+++||||+++++++. +...++|
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEE
Confidence 346778899999999999995 3454 4788887643321 2356788888999999999999999875 4567899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
+||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++......
T Consensus 87 ~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 87 TQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred EEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence 999999999999964 3456999999999999999999999999 9999999999999999999999999997653321
Q ss_pred -----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...++..|+|||.+.++.++.++|||||||++|||+| |..|+.+...... ...+........+..++..
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-----PDLLEKGERLAQPQICTID 239 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCCCcCCCCCCCCHH
Confidence 2345678999999998889999999999999999998 8877755322111 1111111111222334567
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+++.+||..+|++|||+.++++.|..+...
T Consensus 240 ~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 240 VYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 89999999999999999999999999887754
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-42 Score=349.04 Aligned_cols=247 Identities=18% Similarity=0.196 Sum_probs=202.9
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCC-------
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGE------- 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 123 (488)
..|.+.+.||+|+||+||+|. ..+|+.||||++...... ....+.+|+..+..++|+||++++..+....
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 456888899999999999998 567999999999765422 2346889999999999999999888765432
Q ss_pred -eeeEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 124 -ERLLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 124 -~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGls 190 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFS 190 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecccC
Confidence 368999999999999988642 3457999999999999999999999999 999999999999999999999999998
Q ss_pred ccCCC------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC
Q 011349 201 KNSRD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 201 ~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
+.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||............ .. ......
T Consensus 191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~----~~-~~~~~~ 265 (496)
T PTZ00283 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT----LA-GRYDPL 265 (496)
T ss_pred eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----hc-CCCCCC
Confidence 76432 22456899999999999989999999999999999999999988654322111111 11 111234
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+...++++.+++.+||..||.+||++.+++.+
T Consensus 266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 45567889999999999999999999999986
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-42 Score=338.41 Aligned_cols=244 Identities=16% Similarity=0.133 Sum_probs=197.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||++.. .+++.||||+++... ......+.+|+.++..++||||+++++.+.+++..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 357788899999999999994 568999999997432 1234568889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++||+|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 82 FLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred CCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999986 4567999999999999999999999999 999999999999999999999999998643211
Q ss_pred -----------------------------------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCc
Q 011349 207 -----------------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 251 (488)
Q Consensus 207 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~ 251 (488)
....||+.|+|||++.+..++.++|||||||++|||+||..||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 124689999999999999999999999999999999999998865
Q ss_pred chhhhhhccccccccccccCCCCC--hhhHHHHHHHHHHhccCCCCCCCC---HHHHHHH
Q 011349 252 HALDLIRGKNFLMLMDSCLEGHFS--NDDGTELVRLASRCLQYEPRERPN---AKSLVAS 306 (488)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~ 306 (488)
......... +........++ ...+.++.+++.+|+. +|.+|++ +.+++.|
T Consensus 239 ~~~~~~~~~----i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 239 ETPQETYRK----VMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCHHHHHHH----HHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 432221111 11000000111 1245778999999874 9999984 7788877
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=325.54 Aligned_cols=256 Identities=19% Similarity=0.242 Sum_probs=204.4
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCc--EEEEEEccCCC-CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDR--WIAVKRFNRSA-WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
|+++.+.+.||+|+||.||+|... ++. .+++|.++... ....+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 356678889999999999999854 343 47898887432 22345789999999999 79999999999998889999
Q ss_pred EEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 128 VAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEE
Confidence 999999999999986421 135889999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccc
Q 011349 194 LSCFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSC 269 (488)
Q Consensus 194 l~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 269 (488)
|+|||++...... .....+..|+|||++.+..++.++|||||||++|||++ |..||.......... .+...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~-----~~~~~ 234 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE-----KLPQG 234 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHhcC
Confidence 9999998643321 11223457999999988889999999999999999998 888775442221111 11111
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.....+..++..+.+|+.+||..+|.+|||+.+++..|+.+....
T Consensus 235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 122234456788999999999999999999999999998877654
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=324.53 Aligned_cols=250 Identities=22% Similarity=0.321 Sum_probs=203.0
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
+.+++.||+|+||.||++... ....||+|.+..... .....+.+|+.++.++ +|+||+++++++..++..++
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 93 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYV 93 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEE
Confidence 467788999999999999853 236799999875432 2234688999999999 79999999999999999999
Q ss_pred EEecCCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 128 VAEFMPNETLSKHLFHW--------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
||||+++|+|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+|
T Consensus 94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~k 172 (293)
T cd05053 94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVMK 172 (293)
T ss_pred EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeEE
Confidence 99999999999998531 2356899999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccc
Q 011349 194 LSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 194 l~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 266 (488)
|+|||+++...... ...++..|+|||.+.+..++.++|||||||++|||++ |..|++........ ..+
T Consensus 173 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~ 247 (293)
T cd05053 173 IADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-----KLL 247 (293)
T ss_pred eCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH-----HHH
Confidence 99999998654322 1223567999999988889999999999999999998 87776543222111 111
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
........+...+..+.+|+.+||..+|.+|||+.++++.|+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 248 KEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111122334456788999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-42 Score=345.68 Aligned_cols=246 Identities=21% Similarity=0.248 Sum_probs=192.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC--------Cee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--------EER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------~~~ 125 (488)
.|.+++.||+|+||.||+|.. .+++.||||++.... ....+|+.+|+.++|||||++++++... ..+
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 568889999999999999995 568899999985432 3456899999999999999998876432 246
Q ss_pred eEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCccc
Q 011349 126 LLVAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKN 202 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~ 202 (488)
++||||++ ++|.+++.. .....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.
T Consensus 143 ~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~~ 220 (440)
T PTZ00036 143 NVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKN 220 (440)
T ss_pred EEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccchh
Confidence 79999997 577776643 23567999999999999999999999999 99999999999998654 799999999986
Q ss_pred CCCC---CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc----------------
Q 011349 203 SRDG---KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF---------------- 262 (488)
Q Consensus 203 ~~~~---~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~---------------- 262 (488)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||+||.+||.+...........
T Consensus 221 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~ 300 (440)
T PTZ00036 221 LLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNP 300 (440)
T ss_pred ccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhch
Confidence 5432 24567899999999876 468999999999999999999998886542211000000
Q ss_pred -------ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 -------LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 -------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.......+...++...+.++.+|+.+||..||.+|||+.+++.|
T Consensus 301 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 301 NYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00000011112233456789999999999999999999999987
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=322.98 Aligned_cols=254 Identities=20% Similarity=0.311 Sum_probs=201.1
Q ss_pred cccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 127 (488)
.+.+++.||+|+||.||+|.. .++..||||.+........+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 356788899999999999974 2578899999976654445678999999999999999999998754 346899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 85 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 85 VMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred EEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 9999999999999864 2346899999999999999999999999 9999999999999999999999999998654332
Q ss_pred c-------cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh---ccc--------cccccccc
Q 011349 208 S-------YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR---GKN--------FLMLMDSC 269 (488)
Q Consensus 208 ~-------~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~---~~~--------~~~~~~~~ 269 (488)
. ..++..|+|||++.+..++.++|||||||++|||++|..++......... ... ....+...
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN 242 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence 1 11234599999999888999999999999999999987654322111100 000 00111111
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.....+...+.++.+++.+||..+|++|||+.++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 12223345678899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=317.93 Aligned_cols=239 Identities=21% Similarity=0.348 Sum_probs=192.2
Q ss_pred cCCCCCCceEEEEEeCC-------------CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 61 EHGEKAPNVVYKGLVDE-------------DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.||+|+||.||+|.+.. ...|++|.+..........+..|+.+++.++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 57999999999998432 23589999876554445678899999999999999999999998889999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC-------CeeccCCCc
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-------PRLSCFGLM 200 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~-------~kl~Dfgla 200 (488)
||||+++++|..++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. ++++|||++
T Consensus 82 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 82 VEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999999888753 3456999999999999999999999999 999999999999987664 899999999
Q ss_pred ccCCCCCccccccCCCCccccc-cCCcccCCceEeehHHHHHHh-hCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 201 KNSRDGKSYSTNLAFTPPEYLR-TGRVIPESVVYSFGTLLLDLL-SGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 201 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~sDv~slG~il~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
..........++..|+|||.+. +..++.++|||||||++|||+ +|..|+......... ....... ......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-----~~~~~~~--~~~~~~ 232 (262)
T cd05077 160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-----RFYEGQC--MLVTPS 232 (262)
T ss_pred ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-----HHHhcCc--cCCCCC
Confidence 8776655667889999999886 466889999999999999998 466665433211110 0000100 111223
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+.++.+|+.+||+.||.+||++.+|+.+|+
T Consensus 233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 233 CKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 567899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=332.19 Aligned_cols=241 Identities=17% Similarity=0.233 Sum_probs=195.0
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.++.++ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 579999999999994 5688999999986432 2234688999999998 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 82 DLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence 9998886 3457999999999999999999999999 99999999999999999999999999875321 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh-hc--cccccccccccCCCCChhhHHHHHHHHHH
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-RG--KNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
|+.|+|||++.+..++.++|||||||++|||+||+.||........ .. ......... ....+...+..+.+++.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~ 236 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSVKASHVLKG 236 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999998853211000 00 000011111 112344556789999999
Q ss_pred hccCCCCCCCCH------HHHHHH
Q 011349 289 CLQYEPRERPNA------KSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~------~~il~~ 306 (488)
||..||.+|+++ .+++.|
T Consensus 237 ~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 237 FLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HhccCHHHcCCCCCCCCHHHHHcC
Confidence 999999999984 577766
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=317.88 Aligned_cols=248 Identities=25% Similarity=0.358 Sum_probs=205.8
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.+.||.|+||.||+|.. .|+.||||.+..... ..+.+.+|+.+++.++|+||+++++++......++||||+++
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 446778889999999999986 478899999986653 456899999999999999999999999988999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-ccccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-YSTNL 213 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~t~ 213 (488)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++....... ...+.
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 163 (256)
T cd05039 85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPV 163 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCCCcc
Confidence 99999997544447999999999999999999999999 99999999999999999999999999987643322 23356
Q ss_pred CCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC
Q 011349 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292 (488)
Q Consensus 214 ~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 292 (488)
.|+|||++.+..++.++||||||+++|||++ |..|+......... ..+........+...++.+.+++.+||..
T Consensus 164 ~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 238 (256)
T cd05039 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-----PHVEKGYRMEAPEGCPPEVYKVMKDCWEL 238 (256)
T ss_pred cccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHhcCCCCCCccCCCHHHHHHHHHHhcc
Confidence 7999999988889999999999999999997 88776543222111 11111112223345578899999999999
Q ss_pred CCCCCCCHHHHHHHhchh
Q 011349 293 EPRERPNAKSLVASLTPL 310 (488)
Q Consensus 293 dp~~Rps~~~il~~l~~~ 310 (488)
+|++|||+.++++.|+.+
T Consensus 239 ~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 239 DPAKRPTFKQLREQLALI 256 (256)
T ss_pred ChhhCcCHHHHHHHHhcC
Confidence 999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=323.04 Aligned_cols=247 Identities=20% Similarity=0.330 Sum_probs=197.6
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+.+.+.||+|+||.||+|... .+..||||+++.... .....+.+|+.+++.++||||+++++++..+...++|
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 87 (277)
T cd05062 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 87 (277)
T ss_pred ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEE
Confidence 466778899999999998742 256799999865332 2234688999999999999999999999988999999
Q ss_pred EecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 129 AEFMPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
|||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~ 166 (277)
T cd05062 88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMT 166 (277)
T ss_pred EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCc
Confidence 99999999999986421 134678899999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCC
Q 011349 201 KNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 201 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
+...... ...+++.|+|||.+.++.++.++|||||||++|||++ |..|+......... ..+.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~-----~~~~~~~~~~ 241 (277)
T cd05062 167 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVL-----RFVMEGGLLD 241 (277)
T ss_pred cccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHcCCcCC
Confidence 7543322 2234678999999998889999999999999999999 56666543221111 1111111112
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+...+..+.+++.+||+.+|++|||+.+++..|+
T Consensus 242 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 242 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 33455678999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=321.37 Aligned_cols=240 Identities=23% Similarity=0.365 Sum_probs=194.0
Q ss_pred cCCCCCCceEEEEEeC-CC-------cEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 61 EHGEKAPNVVYKGLVD-ED-------RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.||+|+||.||+|... .+ ..||+|.+........+.+..|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 5799999999999843 22 348888886554344567899999999999999999999999989999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC--------CeeccCCCcccCC
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--------PRLSCFGLMKNSR 204 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~--------~kl~Dfgla~~~~ 204 (488)
++|+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++. ++++|||++....
T Consensus 82 ~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 82 KFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred CCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 99999999864 2346899999999999999999999999 999999999999987765 5999999988776
Q ss_pred CCCccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 205 DGKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 205 ~~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
......+++.|+|||++.+ ..++.++|||||||++|||++|..++......... . ..... ....+...+.++.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~---~~~~~--~~~~~~~~~~~~~ 233 (258)
T cd05078 160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-L---QFYED--RHQLPAPKWTELA 233 (258)
T ss_pred CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-H---HHHHc--cccCCCCCcHHHH
Confidence 6666778899999999986 45789999999999999999996444322111100 0 00010 1123334457899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+++.+||+.+|++|||++++++.|+
T Consensus 234 ~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 234 NLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHhccChhhCCCHHHHHHhcC
Confidence 9999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=322.90 Aligned_cols=247 Identities=19% Similarity=0.226 Sum_probs=200.4
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+.+.||+|+||+||+|.. .+++.||+|.+...... ....+.+|+++++.++|+||+.+.+++..++..++||||+
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05632 3 RQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIM 82 (285)
T ss_pred eEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEec
Confidence 4556789999999999994 56889999998754322 2345788999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Ccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSY 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 209 (488)
++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++...... ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05632 83 NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR 161 (285)
T ss_pred cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCC
Confidence 9999998886544557999999999999999999999999 999999999999999999999999998765332 234
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.|+..|+|||.+.+..++.++|||||||++|||++|..||.......... .....+.. ....++...+..+.+|+.+|
T Consensus 162 ~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05632 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKRE-EVDRRVLE-TEEVYSAKFSEEAKSICKML 239 (285)
T ss_pred CCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHhhhc-cccccCccCCHHHHHHHHHH
Confidence 67899999999998889999999999999999999999886532211110 01111100 01123344567889999999
Q ss_pred ccCCCCCCCC-----HHHHHHH
Q 011349 290 LQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps-----~~~il~~ 306 (488)
|+.||++||+ +.+++.+
T Consensus 240 l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 240 LTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ccCCHhHcCCCcccChHHHHcC
Confidence 9999999999 7788876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=335.76 Aligned_cols=247 Identities=19% Similarity=0.237 Sum_probs=205.3
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.++||+.||.|+||.||+|..+ ++-..|.|+|........+++.-|+++|..+.||+||++++.|...+.++|..|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 34589999999999999999944 45556889887766667789999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC----CCCc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGKS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~~ 208 (488)
.||-++.++.. -+..|++.++.-++.|++.||.|||+++ |||||||..|||++-+|.++|+|||++.... ...+
T Consensus 112 ~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs 189 (1187)
T KOG0579|consen 112 GGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS 189 (1187)
T ss_pred CCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence 99999887765 4567999999999999999999999999 9999999999999999999999999875433 2458
Q ss_pred cccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc-ccCCCCChhhHHHH
Q 011349 209 YSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS-CLEGHFSNDDGTEL 282 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 282 (488)
+.|||.|||||+... .+|+.++||||||++|.||..+.+|...-.. +. .+..+-.. ......|..++..+
T Consensus 190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp--MR--VllKiaKSePPTLlqPS~Ws~~F 265 (1187)
T KOG0579|consen 190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP--MR--VLLKIAKSEPPTLLQPSHWSRSF 265 (1187)
T ss_pred ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch--HH--HHHHHhhcCCCcccCcchhhhHH
Confidence 899999999998753 6799999999999999999999976432211 10 01111111 11112345677889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+||.+||..||++.++++|
T Consensus 266 ~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 266 SDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHHHHHhcCCccCCCHHHHhhC
Confidence 999999999999999999999987
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=330.37 Aligned_cols=232 Identities=20% Similarity=0.244 Sum_probs=188.6
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHH-HHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEAR-AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||||++..... .....+..|.. +++.++||||+++++++.+.+..++||||++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999995 4688999999865321 12334555554 578889999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|...+. ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 82 ELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence 9998886 3456899999999999999999999999 99999999999999999999999999875322 123468
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||.+.+..++.++|||||||++|||++|..||........... +... ....+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~----i~~~--~~~~~~~~~~~~~~li~~~l~ 232 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDN----ILHK--PLQLPGGKTVAACDLLVGLLH 232 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHH----HhcC--CCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999998865432221111 1111 112344556789999999999
Q ss_pred CCCCCCCCHH
Q 011349 292 YEPRERPNAK 301 (488)
Q Consensus 292 ~dp~~Rps~~ 301 (488)
.||.+||++.
T Consensus 233 ~~p~~R~~~~ 242 (321)
T cd05603 233 KDQRRRLGAK 242 (321)
T ss_pred CCHhhcCCCC
Confidence 9999998764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=335.72 Aligned_cols=250 Identities=20% Similarity=0.179 Sum_probs=199.5
Q ss_pred hcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 50 TSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 50 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
.-....+.+++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++.+++..
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 33345668889999999999999995 468889999986422 12234578999999999999999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||++||+|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 119 ~lv~Ey~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 119 YMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred EEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence 99999999999999985 345899999999999999999999999 99999999999999999999999999976543
Q ss_pred C-----CccccccCCCCccccccC----CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc--cCCCC
Q 011349 206 G-----KSYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC--LEGHF 274 (488)
Q Consensus 206 ~-----~~~~~t~~y~aPE~~~~~----~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 274 (488)
. ....||+.|+|||++.+. .++.++|||||||++|||++|..||........ ...+.... ...+.
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~ 270 (371)
T cd05622 195 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT----YSKIMNHKNSLTFPD 270 (371)
T ss_pred CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCCcccCCC
Confidence 2 245689999999998753 378899999999999999999999875432111 11111110 11111
Q ss_pred ChhhHHHHHHHHHHhccCCCCC--CCCHHHHHHHh
Q 011349 275 SNDDGTELVRLASRCLQYEPRE--RPNAKSLVASL 307 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~--Rps~~~il~~l 307 (488)
....+..+.+++.+||..++.+ |+++.++++|.
T Consensus 271 ~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 271 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 2245678999999999844433 78999999885
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=330.86 Aligned_cols=234 Identities=20% Similarity=0.225 Sum_probs=189.2
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHH-HHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEAR-AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|.. .+++.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||++|+
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 579999999999995 4678899999875321 12234444544 567789999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 82 ELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence 9999886 3456889999999999999999999999 99999999999999999999999999875432 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|..||.......... .+... ....+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~----~i~~~--~~~~~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD----NILNK--PLQLKPNITNSARHLLEGLLQ 232 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHH----HHHhC--CcCCCCCCCHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999886543221111 11111 112233456789999999999
Q ss_pred CCCCCCCCHHHH
Q 011349 292 YEPRERPNAKSL 303 (488)
Q Consensus 292 ~dp~~Rps~~~i 303 (488)
.+|.+||++.+.
T Consensus 233 ~~p~~R~~~~~~ 244 (325)
T cd05602 233 KDRTKRLGAKDD 244 (325)
T ss_pred cCHHHCCCCCCC
Confidence 999999987743
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=331.95 Aligned_cols=232 Identities=19% Similarity=0.211 Sum_probs=188.9
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHH-HHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEAR-AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|. ..+|+.||||++..... .....+..|.. +++.++||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 57999999999999 45789999999865421 22334556655 467789999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCcccc
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYST 211 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 211 (488)
+|...+. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (325)
T cd05604 82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG 158 (325)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence 9998886 4567999999999999999999999999 99999999999999999999999999875322 224568
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
|+.|+|||++.+..++.++|||||||++|||++|..||........... ..... ...+...+..+.+++.+||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~ll~~ll~ 232 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDN----ILHKP--LVLRPGASLTAWSILEELLE 232 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHH----HHcCC--ccCCCCCCHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999998865432221111 11110 11223456778999999999
Q ss_pred CCCCCCCCHH
Q 011349 292 YEPRERPNAK 301 (488)
Q Consensus 292 ~dp~~Rps~~ 301 (488)
.+|.+||++.
T Consensus 233 ~~p~~R~~~~ 242 (325)
T cd05604 233 KDRQRRLGAK 242 (325)
T ss_pred cCHHhcCCCC
Confidence 9999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=328.40 Aligned_cols=246 Identities=20% Similarity=0.176 Sum_probs=208.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 129 (488)
.|.+.+.||+|.||.||+++. .+|+.+|+|++....... ...+.+|+.+|+++. |||||.++++|.+....++||
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvm 115 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVM 115 (382)
T ss_pred cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEE
Confidence 467778899999999999994 459999999998766443 358999999999998 999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC----CCCCeeccCCCcccCCC
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ----DGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgla~~~~~ 205 (488)
|++.||.|.+.|... .+++..+..++.||+.++.|||+.| |+||||||+|+|+.. ++.+|++|||++.....
T Consensus 116 EL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 116 ELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred EecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 999999999999754 3999999999999999999999999 999999999999953 35799999999998776
Q ss_pred C---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 206 G---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 206 ~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
. ...+||+.|+|||++.+..++..+||||+||++|.|++|.+||.+..............+ ....+.-...+..+
T Consensus 192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--~f~~~~w~~is~~a 269 (382)
T KOG0032|consen 192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--DFTSEPWDDISESA 269 (382)
T ss_pred CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--CCCCCCccccCHHH
Confidence 3 356899999999999999999999999999999999999999987653332221111100 11112222457889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+|+..||..|+|+.++++|
T Consensus 270 kd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 270 KDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HHHHHHhcccCcccCCCHHHHhcC
Confidence 999999999999999999999997
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=317.59 Aligned_cols=248 Identities=25% Similarity=0.351 Sum_probs=206.1
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++.+.+.||+|+||.||+|...++..||||.+.... .....+.+|+.++++++|+||+++++++......++||||+++
T Consensus 7 ~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 85 (261)
T cd05034 7 SLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSK 85 (261)
T ss_pred heeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCC
Confidence 456788899999999999998778889999998654 3456899999999999999999999999888899999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 86 ~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 164 (261)
T cd05034 86 GSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGA 164 (261)
T ss_pred CCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhcc
Confidence 99999997645567999999999999999999999999 9999999999999999999999999987654321 22
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+..|+|||.+.+..++.++||||||+++++|+| |+.|+.......... .+........+...+.++.+++.+
T Consensus 165 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~ 239 (261)
T cd05034 165 KFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLE-----QVERGYRMPRPPNCPEELYDLMLQ 239 (261)
T ss_pred CCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHHHHH
Confidence 33568999999998889999999999999999999 887775432211111 111111222334457789999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|++||++.++++.|+.
T Consensus 240 ~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 240 CWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HcccCcccCCCHHHHHHHHhc
Confidence 999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-41 Score=316.77 Aligned_cols=242 Identities=20% Similarity=0.274 Sum_probs=196.1
Q ss_pred cCCCCCCceEEEEEeC---CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
.||+|+||.||+|.+. .+..||||++...... ..+.+.+|+.++++++||||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4799999999999753 3556999999765422 2456899999999999999999999875 457899999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-------c
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-------Y 209 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-------~ 209 (488)
|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++........ .
T Consensus 81 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999864 3456999999999999999999999999 99999999999999999999999999875543221 1
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||.+.+..++.++|||||||++||+++ |..|+....... ....+........+..+++++.+++.+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~ 233 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-----VMSFIEQGKRLDCPAECPPEMYALMKD 233 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-----HHHHHHCCCCCCCCCCCCHHHHHHHHH
Confidence 22468999999988889999999999999999996 887765432211 111111222233455567899999999
Q ss_pred hccCCCCCCCCHHHHHHHhchh
Q 011349 289 CLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~ 310 (488)
||..+|++||++.+|.+.|+.+
T Consensus 234 c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 234 CWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HcCCChhhCcCHHHHHHHHhhh
Confidence 9999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=317.03 Aligned_cols=247 Identities=23% Similarity=0.303 Sum_probs=201.7
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.+.||+|++|.||+|....+..||+|.+.... ...+.+.+|+.++++++|+|++++++++. .+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 356778899999999999997777779999987544 33567899999999999999999998874 4568999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05069 85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence 99999997544456899999999999999999999999 9999999999999999999999999997653322 22
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||...+..++.++|||||||++|||+| |..|+.......... .+........+...+..+.+++.+
T Consensus 164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05069 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLE-----QVERGYRMPCPQGCPESLHELMKL 238 (260)
T ss_pred ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCcccCHHHHHHHHH
Confidence 34678999999988889999999999999999999 777765432211111 011111122344567889999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|.+||+++++++.|+.
T Consensus 239 ~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 239 CWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HccCCcccCcCHHHHHHHHhc
Confidence 999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=329.40 Aligned_cols=241 Identities=18% Similarity=0.265 Sum_probs=195.9
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEec
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
++++.||+|+||.||+|. ..+|+.||||+++... ....+.+..|..++..+. |++|+++++++...+..++||||
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey 82 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEY 82 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcC
Confidence 566788999999999999 4568999999987542 123356788999998885 57788899999888999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CC
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GK 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~ 207 (488)
++||+|.+++. ....+++.++..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.... ..
T Consensus 83 ~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 83 VNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 99999999886 4456999999999999999999999999 99999999999999999999999999875432 22
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .+... ...++...+.++.+++.
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~ 233 (323)
T cd05615 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ----SIMEH--NVSYPKSLSKEAVSICK 233 (323)
T ss_pred CccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH----HHHhC--CCCCCccCCHHHHHHHH
Confidence 4468999999999998889999999999999999999999886543221111 11111 11234455678999999
Q ss_pred HhccCCCCCCCCH-----HHHHHH
Q 011349 288 RCLQYEPRERPNA-----KSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~-----~~il~~ 306 (488)
+||+.+|.+|++. .++++|
T Consensus 234 ~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 234 GLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred HHcccCHhhCCCCCCCCHHHHhcC
Confidence 9999999999974 455554
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=336.50 Aligned_cols=250 Identities=20% Similarity=0.283 Sum_probs=201.0
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcC-CCCCcccccceecCCeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 127 (488)
+.+.+.||+|+||.||+|.+. .+..||||+++...... .+.+.+|+.+|.++. |||||++++++...+..++
T Consensus 39 ~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~i 118 (401)
T cd05107 39 LVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYI 118 (401)
T ss_pred eehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEE
Confidence 456788999999999999853 24579999998654222 346889999999997 9999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------------------------------------------------------------
Q 011349 128 VAEFMPNETLSKHLFHWE-------------------------------------------------------------- 145 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~-------------------------------------------------------------- 145 (488)
||||+++|+|.+++....
T Consensus 119 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (401)
T cd05107 119 ITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGT 198 (401)
T ss_pred EEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhh
Confidence 999999999999886421
Q ss_pred ----------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 146 ----------------------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 146 ----------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
...+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~~ 277 (401)
T cd05107 199 VKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGKL 277 (401)
T ss_pred hhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCCE
Confidence 124678889999999999999999998 999999999999999999
Q ss_pred CeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |..|+........ ...
T Consensus 278 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~----~~~ 353 (401)
T cd05107 278 VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ----FYN 353 (401)
T ss_pred EEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH----HHH
Confidence 999999999764321 12345678999999998889999999999999999998 7777654321111 011
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.+....+...+...+.++.+++.+||..+|.+||++.+|+..|+.+
T Consensus 354 ~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 354 AIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111112233445678899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=325.27 Aligned_cols=250 Identities=21% Similarity=0.310 Sum_probs=201.8
Q ss_pred ccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
+.+.+.||+|+||.||+|.. ..+..||||+++.... ...+.+.+|+.+++++ +||||+++++++...+..++
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 116 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILV 116 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEE
Confidence 46677889999999999973 1245799999875432 2245689999999999 79999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++|+|.+++.......+++.++..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||+++......
T Consensus 117 v~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 195 (302)
T cd05055 117 ITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDS 195 (302)
T ss_pred EEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCCC
Confidence 999999999999997534445899999999999999999999999 9999999999999999999999999988654322
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...++..|+|||.+.+..++.++|||||||++|||+| |..|+........ +...+........+...+.
T Consensus 196 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 271 (302)
T cd05055 196 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK----FYKLIKEGYRMAQPEHAPA 271 (302)
T ss_pred ceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH----HHHHHHcCCcCCCCCCCCH
Confidence 2234678999999998889999999999999999998 8877654321110 1111111112222334567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
++.+++.+||..+|++|||+.+++..|+++
T Consensus 272 ~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 272 EIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 899999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=318.11 Aligned_cols=244 Identities=20% Similarity=0.247 Sum_probs=201.0
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC-----ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP-----DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+.||+|++|.||+|. ..+++.||+|.+...... ....+.+|+.++++++||||+++++++..++..++|||
T Consensus 5 ~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 84 (263)
T cd06625 5 RRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFME 84 (263)
T ss_pred cccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEE
Confidence 566778999999999999 456899999998754321 13468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++|++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++.....
T Consensus 85 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~ 161 (263)
T cd06625 85 YMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG 161 (263)
T ss_pred ECCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence 999999999986 3456899999999999999999999999 999999999999999999999999998754322
Q ss_pred ---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....++..|+|||.+.+..++.++||||||+++|||++|+.||........ .............+...+..+.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 237 (263)
T cd06625 162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA----IFKIATQPTNPQLPSHVSPDAR 237 (263)
T ss_pred ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH----HHHHhccCCCCCCCccCCHHHH
Confidence 234567899999999998899999999999999999999988754311110 0111111122234455678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+++.+||..+|.+|||+.+++.+.
T Consensus 238 ~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 238 NFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred HHHHHHhhcCcccCCCHHHHhhCC
Confidence 999999999999999999999863
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=326.97 Aligned_cols=254 Identities=20% Similarity=0.308 Sum_probs=205.1
Q ss_pred cccccccCCCCCCceEEEEEeC--------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD--------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEE 124 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 124 (488)
.+.+.+.||+|+||.||++... ++..||+|.++.... .....+.+|+.++..+ +||||+++++++...+.
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 98 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 4678899999999999999742 235699999986532 2345688999999999 79999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG 190 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~ 190 (488)
.++||||+++|+|.+++.... ...+++.+++.++.|++.||.|||+.+ ++||||||+||+++.++
T Consensus 99 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~ 177 (307)
T cd05098 99 LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDN 177 (307)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCCC
Confidence 999999999999999996432 135899999999999999999999999 99999999999999999
Q ss_pred CCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccc
Q 011349 191 NPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFL 263 (488)
Q Consensus 191 ~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~ 263 (488)
.+||+|||+++...... ...+++.|+|||.+.+..++.++|||||||++|||++ |..|+........ .
T Consensus 178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~-----~ 252 (307)
T cd05098 178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-----F 252 (307)
T ss_pred cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH-----H
Confidence 99999999987654321 1123468999999998889999999999999999998 7666654322111 1
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..+........+...+.++.+++.+||..+|.+|||+.++++.|+.+....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 253 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 111111222334456788999999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=321.25 Aligned_cols=239 Identities=23% Similarity=0.353 Sum_probs=190.6
Q ss_pred cCCCCCCceEEEEEeCC-------------------------CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccc
Q 011349 61 EHGEKAPNVVYKGLVDE-------------------------DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNL 115 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 115 (488)
.||+|+||.||+|.+.. ...|++|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 57999999999997421 23589999876543334578899999999999999999
Q ss_pred ccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-----
Q 011349 116 IGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----- 190 (488)
Q Consensus 116 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~----- 190 (488)
++++..+...++||||+++|+|..++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999988864 3456899999999999999999999999 99999999999997644
Q ss_pred --CCeeccCCCcccCCCCCccccccCCCCcccccc-CCcccCCceEeehHHHHHHh-hCCCCCCcchhhhhhcccccccc
Q 011349 191 --NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLL-SGKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 191 --~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~-tg~~p~~~~~~~~~~~~~~~~~~ 266 (488)
.+|++|||++..........++..|+|||.+.+ ..++.++|||||||++|||+ +|..|+......... ...
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~ 234 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-----RFY 234 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-----HHH
Confidence 379999999876554445567889999998875 56899999999999999985 677776543221110 011
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
... ...+...++.+.+++.+||+.+|++|||+.++++.|.
T Consensus 235 ~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 235 EKK--HRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred Hhc--cCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 110 1122223467899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=320.54 Aligned_cols=253 Identities=19% Similarity=0.311 Sum_probs=200.1
Q ss_pred ccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
+.+++.||+|+||.||++.+ .++..||+|.++... ......+.+|+.+++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 46788899999999999974 347789999987543 22345799999999999999999999988765 56899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||++|++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 86 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 86 IMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999999999854 2346899999999999999999999999 9999999999999999999999999998654322
Q ss_pred -------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-------ccc---ccccccccc
Q 011349 208 -------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------GKN---FLMLMDSCL 270 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------~~~---~~~~~~~~~ 270 (488)
...++..|+|||.+.+..++.++|||||||++|||+|+..|.......... ... ....+....
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK 243 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc
Confidence 234566799999998888999999999999999999987653221100000 000 000011111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
....+...+..+.+|+.+||+.+|.+|||+.+++..|+.+
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 244 RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1222344678899999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=327.44 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=209.0
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCCh-HHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.+.++||+|-||.|.++....+..||||+++.....+. .+|.+|+++|.+|+|||||+++|+|..++.+++|+|||++|
T Consensus 541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnG 620 (807)
T KOG1094|consen 541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENG 620 (807)
T ss_pred ehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcC
Confidence 46689999999999999998889999999998765554 78999999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccc-----
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYS----- 210 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~----- 210 (488)
+|.+++....-..+......+|+.||+.||+||.+.+ +|||||.+.|+|+|.++++||+|||+++....+..+.
T Consensus 621 DLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~ 699 (807)
T KOG1094|consen 621 DLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRA 699 (807)
T ss_pred cHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceeeecce
Confidence 9999997544344566778889999999999999999 9999999999999999999999999999776655432
Q ss_pred -cccCCCCccccccCCcccCCceEeehHHHHHHhh--CCCCCCcchhhhhhccccccccccc---cCCCCChhhHHHHHH
Q 011349 211 -TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--GKHIPPSHALDLIRGKNFLMLMDSC---LEGHFSNDDGTELVR 284 (488)
Q Consensus 211 -~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~ 284 (488)
-.++|||||.+.-+++|.+||||+||+++||+++ ...|+.....+.. .++...+++.. .-...|.-+|..+.+
T Consensus 700 vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-ven~~~~~~~~~~~~~l~~P~~cp~~lye 778 (807)
T KOG1094|consen 700 VLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-VENAGEFFRDQGRQVVLSRPPACPQGLYE 778 (807)
T ss_pred eeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-HHhhhhhcCCCCcceeccCCCcCcHHHHH
Confidence 2589999999999999999999999999999865 4556543322211 11112222211 112345567899999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 285 LASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
++.+||..|-++||+++++..+|...
T Consensus 779 lml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 779 LMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 99999999999999999999988653
|
|
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=324.78 Aligned_cols=254 Identities=18% Similarity=0.265 Sum_probs=209.4
Q ss_pred HHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCe
Q 011349 46 LRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124 (488)
Q Consensus 46 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 124 (488)
+...++-...|.+++.||+|+||.||+|. ..+++.||||.+........+.+.+|+.+++.++|+||+++++++..++.
T Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 90 (297)
T cd06656 11 IVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 90 (297)
T ss_pred hcccCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCE
Confidence 33444555677889999999999999999 46799999999987665556778999999999999999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+++++|.+++. ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....
T Consensus 91 ~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 91 LWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred EEEeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 999999999999999984 356899999999999999999999999 9999999999999999999999999987654
Q ss_pred CCC----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 205 DGK----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 205 ~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
... ...+++.|+|||.+.+..++.++|||||||++|+|++|..||........ ..............+...+.
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 243 (297)
T cd06656 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYLIATNGTPELQNPERLSA 243 (297)
T ss_pred CCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh---eeeeccCCCCCCCCccccCH
Confidence 322 34578899999999988899999999999999999999988754321110 00000011111122344567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+++.+||..+|++||++.+++.+
T Consensus 244 ~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 244 VFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 78999999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=332.16 Aligned_cols=241 Identities=19% Similarity=0.269 Sum_probs=205.9
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhh
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 139 (488)
.||+|+||+||-|+ .+++..+|||-+........+-+..|+.+-++++|.|||+++|.+.+++.+-|.||-++||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 47999999999999 55677899999987776667789999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCcccCC----CCCccccc
Q 011349 140 HLFHWENQPM--KWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSR----DGKSYSTN 212 (488)
Q Consensus 140 ~l~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~----~~~~~~~t 212 (488)
+++. .=+++ ++.+.-.+.+||++||.|||++. |||||||-+|||++ -.|.+||+|||-+++.. -..++.||
T Consensus 662 LLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGT 739 (1226)
T KOG4279|consen 662 LLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGT 739 (1226)
T ss_pred HHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCccccccccc
Confidence 9975 23556 78889999999999999999998 99999999999996 67899999999887653 34578999
Q ss_pred cCCCCccccccC--CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 213 LAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 213 ~~y~aPE~~~~~--~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
..|||||++..+ .|..++|||||||++.||.||++||..-+.+...- ..+---..++++|.+.+.+...+|.+|+
T Consensus 740 LQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM---FkVGmyKvHP~iPeelsaeak~FilrcF 816 (1226)
T KOG4279|consen 740 LQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM---FKVGMYKVHPPIPEELSAEAKNFILRCF 816 (1226)
T ss_pred hhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh---hhhcceecCCCCcHHHHHHHHHHHHHHc
Confidence 999999999764 48899999999999999999999986543221111 1111112456788889999999999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 011349 291 QYEPRERPNAKSLVAS 306 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~ 306 (488)
.+||.+||++.++|..
T Consensus 817 epd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 817 EPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCCcccCccHHHhccC
Confidence 9999999999999975
|
|
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-41 Score=314.09 Aligned_cols=241 Identities=26% Similarity=0.394 Sum_probs=198.7
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhh
Q 011349 61 EHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 139 (488)
.||+|+||.||+|...+++.||+|.++...... ...+.+|++++++++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 579999999999998788899999987654322 3468899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----ccccccC
Q 011349 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SYSTNLA 214 (488)
Q Consensus 140 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~~~t~~ 214 (488)
++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... ...++..
T Consensus 82 ~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05085 82 FLRK-KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK 159 (250)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence 8864 2346899999999999999999999999 9999999999999999999999999987543321 1233567
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
|+|||++.+..++.++||||||+++|++++ |..||.......... .+........+...+..+.+++.+||..+
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 234 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQARE-----QVEKGYRMSCPQKCPDDVYKVMQRCWDYK 234 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHHHHHHcccC
Confidence 999999998889999999999999999998 887775542221111 11111122334456788999999999999
Q ss_pred CCCCCCHHHHHHHhc
Q 011349 294 PRERPNAKSLVASLT 308 (488)
Q Consensus 294 p~~Rps~~~il~~l~ 308 (488)
|++||++.++++.|.
T Consensus 235 p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 235 PENRPKFSELQKELA 249 (250)
T ss_pred cccCCCHHHHHHHhc
Confidence 999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=322.72 Aligned_cols=257 Identities=16% Similarity=0.189 Sum_probs=205.4
Q ss_pred HHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC
Q 011349 45 QLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE 123 (488)
Q Consensus 45 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 123 (488)
++.+--...+.|+++++||.|+||.||+|.. .++..|++|.+........+.+.+|+.+++.++||||+++++++..+.
T Consensus 3 ~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 82 (292)
T cd06644 3 HVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG 82 (292)
T ss_pred hhhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence 3444444455678999999999999999995 458899999998665445667899999999999999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
..++||||+++++|..++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSAKN 160 (292)
T ss_pred eEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999999999887753 3456899999999999999999999999 999999999999999999999999998754
Q ss_pred CCC----CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC
Q 011349 204 RDG----KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 204 ~~~----~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
... ....+++.|+|||++.+ ..++.++|||||||++|||++|..|+.......... ....... .....
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~--~~~~~ 237 (292)
T cd06644 161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL-KIAKSEP--PTLSQ 237 (292)
T ss_pred cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHH-HHhcCCC--ccCCC
Confidence 322 23457889999999853 446789999999999999999998875432111100 0000000 01112
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+...+.++.+++.+||..+|++||++.+++++
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 238 PSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 33456789999999999999999999999876
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=317.08 Aligned_cols=248 Identities=20% Similarity=0.295 Sum_probs=198.9
Q ss_pred cccccCCCCCCceEEEEEeC-C---CcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCe------
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-E---DRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEE------ 124 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 124 (488)
.+.+.||+|+||.||+|... + +..||||+++..... ....+.+|++.++.++||||+++++++.....
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 46778899999999999853 2 367999999764422 23578999999999999999999998866544
Q ss_pred eeEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 125 RLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
.++||||+++|+|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccce
Confidence 79999999999999888532 2246899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCC
Q 011349 201 KNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 201 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
+...... ....+..|+|||.+.+..++.++|||||||++|||++ |..|+........ ...+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~-----~~~~~~~~~~~ 235 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI-----YDYLRHGNRLK 235 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCC
Confidence 8654332 1234568999999988889999999999999999999 7666654322111 11111111222
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.+...+..+.+++.+||..||.+|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 3445678899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=315.74 Aligned_cols=253 Identities=19% Similarity=0.267 Sum_probs=206.9
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+.+.||+|+||.||+|... +|+.||+|.++.... ...+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 82 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence 3567788899999999999955 789999999864322 224578999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 131 FMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|+++++|.+++... ....+++.++..++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 99999999988642 3456899999999999999999999999 999999999999999999999999998765432
Q ss_pred --CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh-hhHHHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN-DDGTELV 283 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 283 (488)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.|+......... ....+........+. ..+..+.
T Consensus 162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS---LCKKIEKCDYPPLPADHYSEELR 238 (267)
T ss_pred ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHH---HHhhhhcCCCCCCChhhcCHHHH
Confidence 2346788999999999888999999999999999999999887543221111 000111111112222 4567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
+++.+||..+|++|||+.+|++.|+.+.
T Consensus 239 ~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 239 DLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 9999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-41 Score=319.73 Aligned_cols=251 Identities=18% Similarity=0.260 Sum_probs=200.9
Q ss_pred ccccccCCCCCCceEEEEEe-CCCc----EEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDR----WIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+++.||+|+||+||+|.+ .+++ .||||.++..... ....+.+|+.++..++||||+++++++.. ...+++|
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~ 87 (279)
T cd05109 9 LKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVT 87 (279)
T ss_pred eeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEE
Confidence 46778899999999999984 4554 4899998754322 24578899999999999999999998865 4578999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++......
T Consensus 88 ~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~ 165 (279)
T cd05109 88 QLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 165 (279)
T ss_pred EcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccce
Confidence 99999999999864 2356999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
...+++.|+|||.+.+..++.++|||||||++|||+| |..|+........ ...+........+...+..+
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 240 (279)
T cd05109 166 YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-----PDLLEKGERLPQPPICTIDV 240 (279)
T ss_pred eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCCCcCCCCccCCHHH
Confidence 1233568999999988889999999999999999998 7776643221111 11111111222234456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.+++.+||..||++||++.+++..|..+....
T Consensus 241 ~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 241 YMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 99999999999999999999999998776543
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=326.68 Aligned_cols=252 Identities=20% Similarity=0.309 Sum_probs=203.4
Q ss_pred ccccccCCCCCCceEEEEEe--------CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV--------DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
+.+.+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++......
T Consensus 17 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (304)
T cd05101 17 LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 96 (304)
T ss_pred eeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCce
Confidence 46778899999999999973 124579999987543 22346789999999999 899999999999999999
Q ss_pred eEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++||||+++|+|.+++.... ...+++.++..++.||+.||.|||+++ ++||||||+||++++++.
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~~~ 175 (304)
T cd05101 97 YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTENNV 175 (304)
T ss_pred EEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCCCc
Confidence 99999999999999986421 235788999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++...... ...+++.|+|||++.+..++.++||||||+++|||++ |..|+..........
T Consensus 176 ~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~----- 250 (304)
T cd05101 176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----- 250 (304)
T ss_pred EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH-----
Confidence 9999999998654321 2234578999999988889999999999999999998 666665432222111
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+........+..++..+.+++.+||..+|.+|||+.++++.|+++...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 251 LLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1111112223445678899999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=322.96 Aligned_cols=247 Identities=18% Similarity=0.247 Sum_probs=201.1
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+.+.||+|+||.||++. ..+++.||||.+....... ...+.+|+.++++++|+||+.+++.+.+.+..++||||+
T Consensus 3 ~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05630 3 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 82 (285)
T ss_pred eeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEec
Confidence 455678999999999999 4568899999987543222 245778999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---SY 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~~ 209 (488)
+|++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ..
T Consensus 83 ~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05630 83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR 161 (285)
T ss_pred CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCC
Confidence 9999999886544456999999999999999999999999 9999999999999999999999999987654332 34
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.|+..|+|||++.+..++.++|||||||++|+|++|..||........ .......... .....+...++++.+|+.+|
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05630 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVKE-VQEEYSEKFSPDARSLCKML 239 (285)
T ss_pred CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHHHhhhhh-hhhhcCccCCHHHHHHHHHH
Confidence 678999999999988999999999999999999999998864321100 0001111111 11123344567899999999
Q ss_pred ccCCCCCCCC-----HHHHHHH
Q 011349 290 LQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps-----~~~il~~ 306 (488)
|+.||++||| +.++++|
T Consensus 240 l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 240 LCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred hhcCHHHccCCCCCchHHHHcC
Confidence 9999999999 8899986
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-41 Score=322.03 Aligned_cols=252 Identities=19% Similarity=0.281 Sum_probs=203.8
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+++.+.||+|+||.||+|... ....|++|.+...... ..+.+.+|+.+++.++||||+++++.+...+..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 356788899999999999842 2356899988754422 245788999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccC----------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee
Q 011349 129 AEFMPNETLSKHLFHW----------------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~----------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill 186 (488)
|||+.+++|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+|||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill 160 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLV 160 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEE
Confidence 9999999999987531 1235889999999999999999999999 9999999999999
Q ss_pred cCCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhc
Q 011349 187 DQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRG 259 (488)
Q Consensus 187 ~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~ 259 (488)
++++.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|||+| |..|+........
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-- 238 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL-- 238 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH--
Confidence 999999999999987653321 2234678999999988889999999999999999999 8877754322211
Q ss_pred cccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 260 KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
............+...+.++.+++.+||+.+|++||++.++++.|+.+..+
T Consensus 239 ---~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 239 ---FNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred ---HHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 111122222233445668899999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=320.21 Aligned_cols=247 Identities=17% Similarity=0.177 Sum_probs=200.2
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+++++.||.|+||.||+|... ++..+++|.+........+.+.+|+++++.++||||+++++++..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 467788999999999999954 5788999998765544456789999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYS 210 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~ 210 (488)
++|..++.. ...++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....
T Consensus 87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999888753 3457999999999999999999999999 999999999999999999999999998754332 2346
Q ss_pred cccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 211 TNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 211 ~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
+++.|+|||++. +..++.++|||||||++|||++|++|+................ ......+...+.++.++
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l 241 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE---PPTLAQPSRWSSEFKDF 241 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC---CCCCCCccccCHHHHHH
Confidence 789999999984 3457889999999999999999998875432111100000000 00112233456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+||+.+|.+||++.+++.+-
T Consensus 242 i~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 242 LKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred HHHHccCChhhCcCHHHHhcCC
Confidence 9999999999999999998773
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=314.66 Aligned_cols=243 Identities=28% Similarity=0.390 Sum_probs=202.6
Q ss_pred ccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+.||+|+||.||+|.... +..|+||.++...... .+.+.+|++.++.++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 357999999999999543 7889999998765333 57899999999999999999999999998999999999999
Q ss_pred CChhhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 135 ETLSKHLFHWE-------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 135 gsL~~~l~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
++|.+++.... ...+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||.+......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEccccccccccccc
Confidence 99999997531 367999999999999999999999999 999999999999999999999999999876543
Q ss_pred -----CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....++..|+|||.+.+..++.++|||||||++|||++ |..|+......... ..+........+...+.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 234 (262)
T cd00192 160 YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVL-----EYLRKGYRLPKPEYCPD 234 (262)
T ss_pred ccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHHcCCCCCCCccCCh
Confidence 23456789999999988889999999999999999999 57776544221111 11111122234445678
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
++.+++.+||..+|.+|||+.+++++|+
T Consensus 235 ~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 235 ELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 9999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-41 Score=318.23 Aligned_cols=250 Identities=21% Similarity=0.292 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCceEEEEEeC-CC---cEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-ED---RWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+.+++.+.||+|+||.||+|... ++ ..||||++..... .....|..|+.+++.++||||+++++++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 34577888999999999999953 33 3699999875431 2245799999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS 208 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 208 (488)
|||+++++|.+++.. ..+.+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 84 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 84 TEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 999999999999864 3456899999999999999999999999 99999999999999999999999999875543211
Q ss_pred -------cc--cccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 209 -------YS--TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 209 -------~~--~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
.. .+..|+|||.+.+..++.++|||||||++|||++ |..|+......... ..+........+..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~-----~~i~~~~~~~~~~~~ 236 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-----NAIEQDYRLPPPMDC 236 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHH-----HHHHcCCcCCCcccC
Confidence 11 1347999999998899999999999999999887 88777543221111 111111122233456
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+..+.+++.+||..+|.+||++.+++..|+.+
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 237 PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 77899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=318.61 Aligned_cols=244 Identities=14% Similarity=0.185 Sum_probs=196.7
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecC------CeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEG------EERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~------~~~~lv 128 (488)
.+.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.++.++ +|+||+++++++... ...++|
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv 87 (272)
T cd06637 9 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV 87 (272)
T ss_pred hHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEE
Confidence 5667789999999999994 568889999987554 3456789999999999 699999999998653 458999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 205 (488)
|||+.+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~ 166 (272)
T cd06637 88 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 166 (272)
T ss_pred EEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccccc
Confidence 99999999999987544567999999999999999999999999 99999999999999999999999999876532
Q ss_pred -CCccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 206 -GKSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 206 -~~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
.....|++.|+|||++.+ ..++.++|||||||++|||++|+.|+.......... ...............+
T Consensus 167 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 242 (272)
T cd06637 167 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKSKKWS 242 (272)
T ss_pred cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH----HHhcCCCCCCCCCCcC
Confidence 224567889999999863 457889999999999999999998875432111100 0011111111223456
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.+|+.+||..+|.+|||+.+++.+
T Consensus 243 ~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 243 KKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 789999999999999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=319.95 Aligned_cols=247 Identities=21% Similarity=0.319 Sum_probs=199.6
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+.+++.||+|+||.||+|.+. .+..||+|.+...... ....+.+|+.+++.++|+||+++++++.+....++|
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 87 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFIL 87 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEE
Confidence 367788899999999999954 3567999988754422 234689999999999999999999999988899999
Q ss_pred EecCCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeeccCCCc
Q 011349 129 AEFMPNETLSKHLFHWEN-----QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGLM 200 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla 200 (488)
|||++|++|.+++..... ..+++..++.++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||++
T Consensus 88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~ 166 (277)
T cd05036 88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMA 166 (277)
T ss_pred EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCccc
Confidence 999999999999864321 25899999999999999999999999 99999999999998654 5899999999
Q ss_pred ccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCC
Q 011349 201 KNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 201 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
+...... ....+..|+|||++.+..++.++|||||||++|||++ |..||........ ...+.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~-----~~~~~~~~~~~ 241 (277)
T cd05036 167 RDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV-----MEFVTGGGRLD 241 (277)
T ss_pred cccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHcCCcCC
Confidence 8653321 1222467999999998899999999999999999997 8777654322211 11111112223
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+...+..+.+++.+||+.+|++|||+.+++++|.
T Consensus 242 ~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 242 PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 44556788999999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=335.12 Aligned_cols=248 Identities=17% Similarity=0.223 Sum_probs=195.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCC-----eeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE-----ERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~l 127 (488)
+.+++.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+ ..++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 36778899999999999994 578999999986532 123457889999999999999999999998766 7899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+. ++|.+.+. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 82 VTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred Eeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 999996 68888775 4567999999999999999999999999 999999999999999999999999998764332
Q ss_pred ----CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc--------c----------cc
Q 011349 207 ----KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------N----------FL 263 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------~----------~~ 263 (488)
....+|+.|+|||.+.+. .++.++|||||||++|||++|+.||........... . ..
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence 123568899999999874 478999999999999999999998865421110000 0 00
Q ss_pred c-ccccccC-------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 264 M-LMDSCLE-------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 264 ~-~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
. +...... .......+.++.+|+.+||+.||.+|||+.+++.|-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 0 0000000 011223467889999999999999999999999873
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=317.80 Aligned_cols=248 Identities=23% Similarity=0.301 Sum_probs=195.7
Q ss_pred cccccCCCCCCceEEEEEeCC-Cc--EEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecC------Cee
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE-DR--WIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EER 125 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~ 125 (488)
.+.+.||+|+||.||+|.... +. .||||.++.... ...+.+.+|+.+++.++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 356778999999999999544 33 589999876432 2245788999999999999999999987432 246
Q ss_pred eEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 126 LLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
++||||+++|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||+++++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCccc
Confidence 8999999999999887421 2345899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCC
Q 011349 202 NSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 202 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
...... ...+++.|++||.+.+..++.++|||||||++|||++ |..|+......... ..+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~ 235 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIY-----DYLRQGNRLKQ 235 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHcCCCCCC
Confidence 654322 2234678999999998889999999999999999999 67776543221110 01111111122
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 236 PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 345567899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-41 Score=318.00 Aligned_cols=247 Identities=17% Similarity=0.169 Sum_probs=199.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.+.||+|+||.||+|. ..+++.||+|.++.........+.+|+.+++.++||||+++++.+...+..++||||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 34677788999999999999 45688999999876654445678899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
+++|.+++. ..+.+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ...
T Consensus 90 ~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06645 90 GGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF 166 (267)
T ss_pred CCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccc
Confidence 999999986 4457999999999999999999999999 999999999999999999999999998754322 244
Q ss_pred ccccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-cccccccccCCCCChhhHHHHHHH
Q 011349 210 STNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-FLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 210 ~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
.|+..|+|||++. ...++.++|||||||++|+|++|..|+............ ......+... .....+..+.++
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 244 (267)
T cd06645 167 IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFHHF 244 (267)
T ss_pred cCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHHHH
Confidence 6789999999974 456888999999999999999999887543211100000 0000001000 011245678999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||..+|++|||+.+++++
T Consensus 245 i~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 245 VKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHccCCchhCcCHHHHhcC
Confidence 999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-41 Score=321.35 Aligned_cols=249 Identities=18% Similarity=0.183 Sum_probs=194.1
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhc---CCCCCcccccceec-----CCe
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLL---RSERLVNLIGCCCE-----GEE 124 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~niv~~~~~~~~-----~~~ 124 (488)
|.+++.||+|+||.||+|. ..+++.||+|.++..... ....+.+|+.+++.+ +||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 5678889999999999999 457899999998754322 234566788877766 69999999998764 245
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+. ++|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 82 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 82 VTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred EEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 899999997 58988886544556999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------ccccc-----
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NFLML----- 265 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----------~~~~~----- 265 (488)
.. ....+|..|+|||++.+..++.++|||||||++|+|++|++||........... .+...
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07863 160 CQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPR 239 (288)
T ss_pred CcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccc
Confidence 33 234678899999999988899999999999999999999988754322110000 00000
Q ss_pred --cccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 --MDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 --~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... .......+..+.+++.+||+.||++|||+.+++.|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 240 GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 01112345778999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=315.51 Aligned_cols=245 Identities=17% Similarity=0.191 Sum_probs=203.5
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+++.||.|+||.||++.. .++..||+|.++... ....+.+.+|+.+++.++|+||+++++.+.+++..++||||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 46788899999999999994 468889999986533 2335678899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
+++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++...... ...
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (255)
T cd08219 82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY 160 (255)
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence 999999886545566899999999999999999999999 999999999999999999999999998765432 234
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.+++.|+|||++.+..++.++||||||+++|+|++|..||........... .. .......+...+..+.+++.+|
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~li~~~ 235 (255)
T cd08219 161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK----VC-QGSYKPLPSHYSYELRSLIKQM 235 (255)
T ss_pred cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH----Hh-cCCCCCCCcccCHHHHHHHHHH
Confidence 678899999999988899999999999999999999998865432211111 00 1111123344567899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|..||++|||+.+++..
T Consensus 236 l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 236 FKRNPRSRPSATTILSR 252 (255)
T ss_pred HhCCcccCCCHHHHhhc
Confidence 99999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=314.73 Aligned_cols=242 Identities=23% Similarity=0.282 Sum_probs=197.6
Q ss_pred cCCCCCCceEEEEEeCC--Cc--EEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLVDE--DR--WIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|++|.||+|.+.+ ++ .||||.+..... ...+.+.+|+.++++++||||+++++.+.. ...++||||++++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 57999999999998533 33 699999987765 345689999999999999999999999988 8899999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-------c
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-------S 208 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~ 208 (488)
+|.+.+.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence 9999997533256899999999999999999999999 9999999999999999999999999988664421 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||++.+..++.++|||||||++|||+| |..|+........... ... .......+...+..+.+++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~li~ 235 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKK-IDK---EGERLERPEACPQDIYNVML 235 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHh---cCCcCCCCccCCHHHHHHHH
Confidence 345678999999998889999999999999999999 8887643321111000 000 11111223345678999999
Q ss_pred HhccCCCCCCCCHHHHHHHhc
Q 011349 288 RCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~ 308 (488)
+||..+|++|||+.++++.|.
T Consensus 236 ~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 236 QCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHCCCCcccCCCHHHHHHHhc
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=324.98 Aligned_cols=246 Identities=24% Similarity=0.363 Sum_probs=212.6
Q ss_pred cccCCCCCCceEEEEEeCC---Cc--EEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 59 VSEHGEKAPNVVYKGLVDE---DR--WIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~---~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
-+.||.|.||.||+|.+.+ |. .||||..+.+. ..+.+.|..|+.+|+.++|||||+++|+|.+ ...+||||++
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~ 472 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELA 472 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEecc
Confidence 3568999999999999432 33 48999998754 3446789999999999999999999999964 6789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcccc-
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST- 211 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~- 211 (488)
+-|.|..+|.. +...|+......++.||+.||.|||+.. +|||||-..|||+.+.-.+||+|||+++...+..-+..
T Consensus 473 ~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS 550 (974)
T KOG4257|consen 473 PLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS 550 (974)
T ss_pred cchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence 99999999975 4456999999999999999999999998 99999999999999999999999999998877653332
Q ss_pred ----ccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 212 ----NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 212 ----t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
.+-|||||.+....++.+||||-|||++||++. |..||.+ +.+.+....+...-+.+.|+.||+.+..|+
T Consensus 551 ~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg-----vkNsDVI~~iEnGeRlP~P~nCPp~LYslm 625 (974)
T KOG4257|consen 551 RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG-----VKNSDVIGHIENGERLPCPPNCPPALYSLM 625 (974)
T ss_pred ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc-----ccccceEEEecCCCCCCCCCCCChHHHHHH
Confidence 357999999999999999999999999999876 7777765 445555556666677788999999999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+||+.+|.+||++.++...|..+..
T Consensus 626 skcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 626 SKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHHhccCcccCCcHHHHHHHHHHHHH
Confidence 99999999999999999998876543
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-41 Score=326.83 Aligned_cols=249 Identities=19% Similarity=0.148 Sum_probs=196.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+|.+++.||+|+||.||++.. .+++.||||+++... ....+.+.+|+.++..++|+||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 467889999999999999994 468899999986422 1234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++||+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred cCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 9999999999864 2456899999999999999999999999 9999999999999999999999999987654322
Q ss_pred --ccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 --SYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...||+.|+|||++.+ ..++.++|||||||++|||++|+.||............... .............+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~ 238 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH-KEHFQFPPDVTDVSE 238 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcC-CCcccCCCccCCCCH
Confidence 2358999999999863 45788999999999999999999988654221111100000 000000111123567
Q ss_pred HHHHHHHHhccCCCC--CCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPR--ERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~--~Rps~~~il~~ 306 (488)
.+.+++.+|+..++. .||++.+++.|
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 239 EAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 889999998865433 47899999998
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=314.56 Aligned_cols=247 Identities=22% Similarity=0.220 Sum_probs=190.8
Q ss_pred ccCCCCCCceEEEEEeCC---CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 60 SEHGEKAPNVVYKGLVDE---DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
+.||+|+||.||+|...+ +..+|+|.++..... ....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 357999999999998543 457999998765422 2347889999999999999999999999888999999999999
Q ss_pred ChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 136 TLSKHLFHWE---NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 136 sL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 9999986422 235677888899999999999999999 9999999999999999999999999987543321
Q ss_pred -ccccccCCCCccccccC-------CcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 208 -SYSTNLAFTPPEYLRTG-------RVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~-------~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
...++..|+|||++.+. .++.++||||||+++|||++ |..||......................+......
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL 239 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence 23456789999998642 35789999999999999996 9888754322211111111111111112222234
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+..+.+++.+|| .+|++|||+.+|+..|+
T Consensus 240 ~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 240 SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 577899999999 68999999999998874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-41 Score=319.60 Aligned_cols=244 Identities=20% Similarity=0.249 Sum_probs=197.1
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++++.||+|+||.||+|. ..+++.||||++..... .....+.+|+.++.+++||||+++++++...+..++||||++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 82 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD 82 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence 4677889999999999999 45788999999875432 224568899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Ccccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYST 211 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~~ 211 (488)
+++|..+. .+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....+
T Consensus 83 ~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (279)
T cd06619 83 GGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVG 155 (279)
T ss_pred CCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCC
Confidence 99996542 3788999999999999999999999 999999999999999999999999998765432 34578
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh--c-cccccccccccCCCCChhhHHHHHHHHHH
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR--G-KNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
|..|+|||++.+..++.++|||||||++|+|++|+.||......... . ...................++++.+++.+
T Consensus 156 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (279)
T cd06619 156 TNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQ 235 (279)
T ss_pred ChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHH
Confidence 89999999999888999999999999999999999887542111000 0 00000011111111112345789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||+.+|++||++++++.+
T Consensus 236 ~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 236 CMRKQPKERPAPENLMDH 253 (279)
T ss_pred HhhCChhhCCCHHHHhcC
Confidence 999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-41 Score=328.74 Aligned_cols=253 Identities=21% Similarity=0.292 Sum_probs=199.3
Q ss_pred cccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecC-Cee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEG-EER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~~~ 125 (488)
.+.+.+.||+|+||.||+|.. .+++.||||+++..... ....+.+|+.++.++ +||||+++++++... ...
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 87 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence 457889999999999999973 34678999999765422 235688999999999 689999999988654 467
Q ss_pred eEEEecCCCCChhhhhccCC------------------------------------------------------------
Q 011349 126 LLVAEFMPNETLSKHLFHWE------------------------------------------------------------ 145 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------ 145 (488)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999886321
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC------ccccccC
Q 011349 146 -----NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTNLA 214 (488)
Q Consensus 146 -----~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~~ 214 (488)
...+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....... ...++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 246 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence 124788899999999999999999999 9999999999999999999999999987653221 2234567
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
|+|||.+.+..++.++|||||||++|+|++ |..|++....... ....+........+...++++.+++.+||+.+
T Consensus 247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~ 322 (343)
T cd05103 247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 322 (343)
T ss_pred eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH----HHHHHhccCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999988889999999999999999997 7777654321110 01111111111222334568999999999999
Q ss_pred CCCCCCHHHHHHHhchhhc
Q 011349 294 PRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 294 p~~Rps~~~il~~l~~~~~ 312 (488)
|++|||+.+|+++|+.+..
T Consensus 323 p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 323 PSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=313.48 Aligned_cols=247 Identities=21% Similarity=0.309 Sum_probs=202.4
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.++||+|+||.||+|....+..||+|.+.... ...+.+.+|+.++++++|+||+++++++.. ...++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~ 84 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAK 84 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCC
Confidence 356788899999999999997777889999987543 234678999999999999999999999877 778999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
++|.+++.......+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 163 (260)
T cd05073 85 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 163 (260)
T ss_pred CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCC
Confidence 99999997545567899999999999999999999999 9999999999999999999999999987654322 12
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||++.+..++.++|||||||++|+++| |..|+.......... .+........+...+.++.+++.+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~ 238 (260)
T cd05073 164 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR-----ALERGYRMPRPENCPEELYNIMMR 238 (260)
T ss_pred cccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHH-----HHhCCCCCCCcccCCHHHHHHHHH
Confidence 34567999999998889999999999999999999 777765432221111 111111112233456789999999
Q ss_pred hccCCCCCCCCHHHHHHHhch
Q 011349 289 CLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~ 309 (488)
||..+|++||++.+++..|+.
T Consensus 239 ~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 239 CWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HcccCcccCcCHHHHHHHHhc
Confidence 999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=320.85 Aligned_cols=252 Identities=17% Similarity=0.251 Sum_probs=207.3
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+.....+.+++.||.|++|.||+|. ..+++.||||.+........+.+.+|+.+++.++||||+++++++...+..+
T Consensus 13 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (296)
T cd06655 13 SIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELF 92 (296)
T ss_pred hcCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEE
Confidence 333334457888999999999999998 4678999999997665555678899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|..++. ...+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 93 lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 93 VVMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EEEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 9999999999999884 346899999999999999999999999 999999999999999999999999998765432
Q ss_pred C----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 K----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 ~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
. ...++..|+|||.+.+..++.++|||||||++|+|++|+.||........... .. .........+...++.+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 245 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IA--TNGTPELQNPEKLSPIF 245 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HH--hcCCcccCCcccCCHHH
Confidence 2 34578899999999988899999999999999999999988765322110000 00 00011112233456789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+||..||.+||++.+++.+
T Consensus 246 ~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 246 RDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHHHHHHhhcChhhCCCHHHHhhC
Confidence 999999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=314.98 Aligned_cols=246 Identities=21% Similarity=0.299 Sum_probs=192.2
Q ss_pred cCCCCCCceEEEEEeC----CCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCccccccee-cCCeeeEEEecCCC
Q 011349 61 EHGEKAPNVVYKGLVD----EDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCC-EGEERLLVAEFMPN 134 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~ 134 (488)
.||+|+||.||+|... ....||||.+.... ....+.+.+|+.+++.++||||+++++++. .++..++||||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 5799999999999843 23579999986432 223457889999999999999999999775 45568999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-------
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------- 207 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------- 207 (488)
++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++......
T Consensus 82 ~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 82 GDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 999999864 2345778888999999999999999999 9999999999999999999999999987543221
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...++..|+|||.+.+..++.++|||||||++|||++|+.|+....... .....+........+...+..+.+++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li 235 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF----DITVYLLQGRRLLQPEYCPDPLYEVM 235 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHhcCCCCCCCCcCCHHHHHHH
Confidence 2234678999999988889999999999999999999655443221110 00001111111122334467899999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+||..+|++||++.+++..|+.+..
T Consensus 236 ~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 236 LSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred HHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 99999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-41 Score=318.51 Aligned_cols=248 Identities=22% Similarity=0.353 Sum_probs=201.4
Q ss_pred cccccccCCCCCCceEEEEEeCC------CcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE------DRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+++.||+|+||.||+|.... +..||+|.+..... .....+.+|+.++..++||||+++++++......++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~ 86 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLV 86 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEE
Confidence 35678889999999999998532 36799999875432 223468899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 128 VAEFMPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
||||+++++|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~ 165 (277)
T cd05032 87 VMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCccc
Confidence 999999999999986421 234788999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCC
Q 011349 200 MKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 200 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
++..... ....++..|+|||.+.+..++.++|||||||++||++| |..|+.......... .+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~ 240 (277)
T cd05032 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK-----FVIDGGHL 240 (277)
T ss_pred chhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH-----HHhcCCCC
Confidence 8765332 22345678999999988889999999999999999998 777765432221111 11111122
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
..+...+..+.+++.+||..+|++|||+.++++.|+
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 241 DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 334455788999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=327.10 Aligned_cols=249 Identities=19% Similarity=0.298 Sum_probs=217.2
Q ss_pred ccccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 58 IVSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
+..+||-|.||.||.|.|+. .-.||||.++.+. -..++|++|+.+|+.++|||+|+++|+|.....+|||+|||..|+
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGN 349 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGN 349 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCcc
Confidence 45689999999999999765 6679999998776 456899999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--cccc---
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--SYST--- 211 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~~~~--- 211 (488)
|.++|++..+..++.-..+.++.||..|+.||..++ +|||||-..|+|+.++..+|++||||++.+.... ...|
T Consensus 350 LLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKF 428 (1157)
T KOG4278|consen 350 LLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKF 428 (1157)
T ss_pred HHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccC
Confidence 999998877778888899999999999999999999 9999999999999999999999999999876543 2223
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCC-CCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK-HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
.+-|.|||-+....++.|+|||+|||+|||+.|.. .|+++.. ..++-.++....+..-|..||+.+.+|+..||
T Consensus 429 PIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----lSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW 503 (1157)
T KOG4278|consen 429 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYGLLEKGYRMDGPEGCPPKVYELMRACW 503 (1157)
T ss_pred cccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----HHHHHHHHhccccccCCCCCCHHHHHHHHHHh
Confidence 47899999999999999999999999999998854 5666532 23334455556666778889999999999999
Q ss_pred cCCCCCCCCHHHHHHHhchhhcc
Q 011349 291 QYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+|.+||++.++-+.++.+...
T Consensus 504 ~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 504 NWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred cCCcccCccHHHHHHHHHHHhcc
Confidence 99999999999999999876543
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=320.00 Aligned_cols=253 Identities=19% Similarity=0.257 Sum_probs=199.2
Q ss_pred cccccccCCCCCCceEEEEEeCC-----------------CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccc
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE-----------------DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLI 116 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~ 116 (488)
.+.++++||+|+||.||+|.... +..||+|.+...... ....+.+|++++++++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 85 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLL 85 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 56788999999999999988432 245899998765422 345788999999999999999999
Q ss_pred cceecCCeeeEEEecCCCCChhhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec
Q 011349 117 GCCCEGEERLLVAEFMPNETLSKHLFHWE---------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187 (488)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~ 187 (488)
+++..++..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05051 86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeec
Confidence 99999899999999999999999986422 126899999999999999999999999 99999999999999
Q ss_pred CCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh--CCCCCCcchhhhh-h
Q 011349 188 QDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--GKHIPPSHALDLI-R 258 (488)
Q Consensus 188 ~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t--g~~p~~~~~~~~~-~ 258 (488)
.++.++|+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..|+........ .
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05051 165 KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIE 244 (296)
T ss_pred CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHH
Confidence 99999999999987653322 2344678999999988889999999999999999998 4444432211110 0
Q ss_pred c-cccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 259 G-KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 259 ~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
. ...............+...+.++.+++.+||+.||.+|||+.+|++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 245 NAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 0 0000000011111223345678999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=330.19 Aligned_cols=248 Identities=15% Similarity=0.184 Sum_probs=194.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCC------e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE------E 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 124 (488)
..|.+++.||+|+||.||++.. .+|..||||++.... ......+.+|+.+++.++||||+++++++.... .
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence 4567889999999999999994 568999999997542 223457889999999999999999999886543 4
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||++ ++|...+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 101 VYLVMELMD-ANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred eEEEEeCCC-cCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 799999997 56666663 34889999999999999999999999 9999999999999999999999999997654
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-------c--------------
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------K-------------- 260 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-------~-------------- 260 (488)
.. ....+|+.|+|||.+.+..++.++|||||||++|+|+||+.||.......... .
T Consensus 175 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (359)
T cd07876 175 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVR 254 (359)
T ss_pred cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 32 23567899999999999899999999999999999999999886432100000 0
Q ss_pred ------------ccccccccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 261 ------------NFLMLMDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 261 ------------~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.+.+....... .......++.+.+|+.+||..||++|||+.+++.|-
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 255 NYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 00000000000 001112346789999999999999999999999974
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=313.96 Aligned_cols=246 Identities=24% Similarity=0.353 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
..+.+.+.||+|+||.||++.. +++.||+|.++... ....+.+|+.+++.++|||++++++++.. +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCC
Confidence 4567888999999999999975 67789999986543 34678999999999999999999998865 45799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Cccccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTN 212 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t 212 (488)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .....+
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP 160 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCC
Confidence 999999997544556899999999999999999999999 999999999999999999999999998765432 223345
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
..|+|||.+.+..++.++|||||||++|||++ |+.|+......... ...........+...+..+.+++.+||.
T Consensus 161 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~ 235 (254)
T cd05083 161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK-----ECVEKGYRMEPPEGCPADVYVLMTSCWE 235 (254)
T ss_pred ceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHH-----HHHhCCCCCCCCCcCCHHHHHHHHHHcC
Confidence 68999999988889999999999999999998 88776544322111 1111112222334557889999999999
Q ss_pred CCCCCCCCHHHHHHHhch
Q 011349 292 YEPRERPNAKSLVASLTP 309 (488)
Q Consensus 292 ~dp~~Rps~~~il~~l~~ 309 (488)
.+|.+||++.+++..|+.
T Consensus 236 ~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 236 TEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CChhhCcCHHHHHHHHcc
Confidence 999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-41 Score=326.19 Aligned_cols=248 Identities=19% Similarity=0.212 Sum_probs=194.0
Q ss_pred ccccCCCC--CCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 58 IVSEHGEK--APNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 58 ~~~~lG~G--~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+++.||+| +||+||++. ..+|+.||||++....... .+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45678998 788999998 5678999999997654222 346788999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC------
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------ 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------ 206 (488)
++|+|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++++||+........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 9999999986544456999999999999999999999999 999999999999999999999999865432211
Q ss_pred -----CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh----cccccccccc-------
Q 011349 207 -----KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----GKNFLMLMDS------- 268 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~----~~~~~~~~~~------- 268 (488)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ........+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 12245678999999976 45889999999999999999999988643211100 0000000000
Q ss_pred -----------------------------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 -----------------------------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 -----------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..........++.+.+++.+||+.||++|||+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 00001122345689999999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=318.32 Aligned_cols=242 Identities=17% Similarity=0.289 Sum_probs=200.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+++.||+|+||.||+|.. .++..||+|.+..... ...+.+.+|+.++++++||||+++++++..+...++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 34566789999999999984 4688899999875432 224578999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 209 (488)
+++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....... ..
T Consensus 86 ~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06642 86 GGSALDLLK---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence 999999884 456899999999999999999999999 9999999999999999999999999987654332 23
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.++..|+|||++.+..++.++|||||||++|||+||..|+........ ...+............+..+.+++.+|
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06642 162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----LFLIPKNSPPTLEGQYSKPFKEFVEAC 236 (277)
T ss_pred cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----HhhhhcCCCCCCCcccCHHHHHHHHHH
Confidence 567899999999988899999999999999999999987653211111 111111112223334567899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|..+|++||++.+++.+
T Consensus 237 l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 237 LNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCCcccCcCHHHHHHh
Confidence 99999999999999997
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=319.10 Aligned_cols=254 Identities=24% Similarity=0.330 Sum_probs=204.0
Q ss_pred cccccccCCCCCCceEEEEEeC-----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceec--CCeee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~ 126 (488)
.+.+++.||+|+||.||+|.+. ++..||||+++..... ..+.+.+|+++++.++|+||+++++++.. +...+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4567788999999999999853 3678999999866533 35689999999999999999999998877 55789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 85 lv~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05038 85 LIMEYLPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPED 162 (284)
T ss_pred EEEecCCCCCHHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence 99999999999999964 2335999999999999999999999999 999999999999999999999999999876532
Q ss_pred C-------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh----------ccccccccccc
Q 011349 207 K-------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----------GKNFLMLMDSC 269 (488)
Q Consensus 207 ~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~----------~~~~~~~~~~~ 269 (488)
. ...++..|++||.+.+..++.++||||||++++||+||..|+......... .......+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05038 163 KDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG 242 (284)
T ss_pred CcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC
Confidence 1 123345699999998888999999999999999999999876432211100 00011111111
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.....+..++.++.+++.+||..+|.+|||+.++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 243 ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 22223345567899999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=312.05 Aligned_cols=242 Identities=26% Similarity=0.406 Sum_probs=199.2
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
+.||.|+||.||++....++.||+|++...... ....+.+|++++++++|+||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 357999999999999766899999998765533 3457999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC------ccccc
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------SYSTN 212 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t 212 (488)
+++.. ....+++..+..++.+++.||.|||+++ ++||||||+||+++.++.++|+|||++....... ....+
T Consensus 81 ~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (251)
T cd05041 81 TFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP 158 (251)
T ss_pred HHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence 99864 2346899999999999999999999999 9999999999999999999999999988654221 12235
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
..|+|||.+.++.++.++|||||||++|||+| |..|+......... ..+........+...+..+.+++.+||.
T Consensus 159 ~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~l~ 233 (251)
T cd05041 159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR-----ERIESGYRMPAPQLCPEEIYRLMLQCWA 233 (251)
T ss_pred eccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH-----HHHhcCCCCCCCccCCHHHHHHHHHHhc
Confidence 67999999988889999999999999999999 66666443221111 1111111222344567889999999999
Q ss_pred CCCCCCCCHHHHHHHhc
Q 011349 292 YEPRERPNAKSLVASLT 308 (488)
Q Consensus 292 ~dp~~Rps~~~il~~l~ 308 (488)
.+|.+|||+.++++.|+
T Consensus 234 ~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 234 YDPENRPSFSEIYNELQ 250 (251)
T ss_pred cChhhCcCHHHHHHHhh
Confidence 99999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=312.91 Aligned_cols=246 Identities=23% Similarity=0.336 Sum_probs=201.3
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++.+.+.||.|+||.||+|.+.++..+|+|.+.... .....+.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 4567888999999999999997678889999987543 345679999999999999999999999998899999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 83 ~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05112 83 HGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG 160 (256)
T ss_pred CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence 9999998864 2356899999999999999999999999 9999999999999999999999999987553321 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..++..|+|||.+.++.++.++||||||+++|||++ |..|+.......... .+........+...+..+.+|+.
T Consensus 161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~ 235 (256)
T cd05112 161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVE-----TINAGFRLYKPRLASQSVYELMQ 235 (256)
T ss_pred CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH-----HHhCCCCCCCCCCCCHHHHHHHH
Confidence 234568999999998889999999999999999998 777765432111111 00111111122234678999999
Q ss_pred HhccCCCCCCCCHHHHHHHh
Q 011349 288 RCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l 307 (488)
+||..+|++|||+.++++.|
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 236 HCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHcccChhhCCCHHHHHHhh
Confidence 99999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=316.51 Aligned_cols=253 Identities=17% Similarity=0.214 Sum_probs=202.9
Q ss_pred HHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCe
Q 011349 46 LRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124 (488)
Q Consensus 46 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 124 (488)
++.++++++...+ ||+|+||.||+|. ..++..||+|.+........+.+.+|+.++++++|+||+++++++..++.
T Consensus 3 ~~~~~~~~~~~~~---lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (268)
T cd06624 3 YEYEYDENGERVV---LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF 79 (268)
T ss_pred cccccccCCceEE---EecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCE
Confidence 4456777765554 5999999999999 45688899999887665556689999999999999999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCcc
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPM--KWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMK 201 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~ 201 (488)
.++|+||+++++|.+++... ...+ ++..+..++.||+.||.|||+.+ |+||||||+||+++. ++.++|+|||++.
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 99999999999999998642 2345 88899999999999999999999 999999999999976 6799999999987
Q ss_pred cCCCC----CccccccCCCCccccccCC--cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 202 NSRDG----KSYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 202 ~~~~~----~~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
..... ....+++.|+|||.+.+.. ++.++||||||+++|+|++|+.|+.......... ...........++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~ 234 (268)
T cd06624 158 RLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM---FKVGMFKIHPEIP 234 (268)
T ss_pred ecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH---hhhhhhccCCCCC
Confidence 65322 2345788999999986643 7889999999999999999998875431111000 0000001122344
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...++++.+++.+||+.+|.+|||+.+++.+
T Consensus 235 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 235 ESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred cccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 4567889999999999999999999999876
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=322.11 Aligned_cols=251 Identities=20% Similarity=0.254 Sum_probs=200.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+++++.||+|+||.||++.. .++..||+|.++..... ...++.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 357788899999999999994 46888999998754322 2346889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCC--Ccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSY 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~ 209 (488)
+|++|.+++.. ...+++..+..++.||+.||.|||+. + ++|+||||+|||+++++.++|+|||++...... ...
T Consensus 82 ~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (308)
T cd06615 82 DGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 158 (308)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccccC
Confidence 99999999973 46689999999999999999999984 6 999999999999999999999999998765432 345
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc---cccccc---------------------
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG---KNFLML--------------------- 265 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~---~~~~~~--------------------- 265 (488)
.++..|+|||.+.+..++.++|||||||++|+|+||+.|+.......... ......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (308)
T cd06615 159 VGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA 238 (308)
T ss_pred CCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence 67899999999988889999999999999999999998875432111100 000000
Q ss_pred ----cccc---cCCCCC-hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 266 ----MDSC---LEGHFS-NDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 266 ----~~~~---~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+.. ..+..+ ...+.++.+++.+||..+|++|||+.+++.+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 0000 000111 124567999999999999999999999999843
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=321.94 Aligned_cols=252 Identities=21% Similarity=0.319 Sum_probs=202.7
Q ss_pred ccccccCCCCCCceEEEEEeC--------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD--------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
+.+.+.||+|+||.||+|... ....||+|+++.... .....+.+|+.+++++ +||||+++++++...+..
T Consensus 14 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 93 (314)
T cd05099 14 LVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPL 93 (314)
T ss_pred eeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCce
Confidence 457788999999999999731 245699999875432 2245688999999999 699999999999988899
Q ss_pred eEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++||||+++|+|.+++.... ...+++.++..++.||+.||.|||+++ ++||||||+|||++.++.
T Consensus 94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~ 172 (314)
T cd05099 94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDNV 172 (314)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCCc
Confidence 99999999999999986421 245899999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|||++ |..|+......... .
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~-----~ 247 (314)
T cd05099 173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF-----K 247 (314)
T ss_pred EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH-----H
Confidence 9999999998654321 1123467999999988889999999999999999999 77776543221111 1
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+........+..++.++.+++.+||..+|++|||+.++++.|..+...
T Consensus 248 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 248 LLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 1111111223445677899999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=316.14 Aligned_cols=247 Identities=21% Similarity=0.295 Sum_probs=200.1
Q ss_pred cccccCCCCCCceEEEEEeC-CCc---EEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-EDR---WIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-~~~---~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...+.||+|+||.||+|... ++. .+|||++..... ...+.+..|++++++++||||+++.+++...+..++||||
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (268)
T cd05063 8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEY 87 (268)
T ss_pred eEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEc
Confidence 44567899999999999954 333 699999875532 2245789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc---
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--- 208 (488)
+++++|.+++.. ....+++.++..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 88 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 165 (268)
T cd05063 88 MENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTY 165 (268)
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceecccccccce
Confidence 999999999864 3456899999999999999999999999 99999999999999999999999999876543211
Q ss_pred ----cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 209 ----YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 209 ----~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...+..|+|||++.+..++.++|||||||++|||+| |..|+........ ...+......+.+...+..+.
T Consensus 166 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~ 240 (268)
T cd05063 166 TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEV-----MKAINDGFRLPAPMDCPSAVY 240 (268)
T ss_pred eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHH-----HHHHhcCCCCCCCCCCCHHHH
Confidence 112357999999988889999999999999999998 8888754322111 111111122223345678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+++.+||+.+|++||++.++++.|+++
T Consensus 241 ~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 241 QLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-41 Score=324.12 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=198.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.++++||+|+||.||+|.. .+++.||||.++..... ....+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 4578899999999999999994 46888999998754422 234678999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
++ ++|.+++.. .+..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 86 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (309)
T cd07872 86 LD-KDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYS 162 (309)
T ss_pred CC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCccccc
Confidence 97 588887754 3445899999999999999999999999 999999999999999999999999998754322 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------cccc--------cc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------FLML--------MD 267 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------~~~~--------~~ 267 (488)
...+|+.|+|||.+.+ ..++.++|||||||++|+|+||+.||............ +... ..
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07872 163 NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYN 242 (309)
T ss_pred cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence 3456889999999865 46889999999999999999999888654321110000 0000 00
Q ss_pred -cccCC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 -SCLEG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 -~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.... ......+.++.+++.+||..||.+|||+.+++.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 00000 0112346778999999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=313.11 Aligned_cols=243 Identities=24% Similarity=0.347 Sum_probs=196.8
Q ss_pred ccCCCCCCceEEEEEeC-C---CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLVD-E---DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++||+|+||.||+|.+. . +..||+|.+...... ..+.+.+|+.+++.++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 36799999999999842 2 267999999866532 3457899999999999999999999875 5568999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcc-----
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY----- 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~----- 209 (488)
++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999973 347999999999999999999999999 999999999999999999999999998865433221
Q ss_pred --ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 210 --STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 210 --~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
.++..|+|||.+.+..++.++|||||||++|+|++ |..|+....... ....+........+..++..+.+++
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li 231 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE-----VIAMLESGERLPRPEECPQEIYSIM 231 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH-----HHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 12457999999998889999999999999999998 887764432111 1111111112233445668899999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhh
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
.+||..+|.+||++.++++.|+.+.
T Consensus 232 ~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 232 LSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHhcCChhhCcCHHHHHHHHHhcc
Confidence 9999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=328.19 Aligned_cols=243 Identities=21% Similarity=0.300 Sum_probs=208.0
Q ss_pred ccccCCCCCCceEEEEEeCC--Cc--EEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 58 IVSEHGEKAPNVVYKGLVDE--DR--WIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.++||+|.||+|++|.|.. |+ .||||+++.+... ...+|.+|+.+|.+|+|+|++++||+..+ ....+|||++
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 45678999999999999643 44 4899999987755 56789999999999999999999999876 7789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcc---
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--- 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~--- 209 (488)
+.|+|.+.|++.....|.....-.++.||+.||.||.+++ +|||||-..|+|+-....|||+||||.+.+......
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 9999999998755667888999999999999999999999 999999999999999999999999999987655432
Q ss_pred ----ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCC-CCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 210 ----STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH-IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 210 ----~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
.....|+|||.++..+++.+||||+|||+||||+|+.. ||.+. ....+.+.++..-+..-+..|+.++.+
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-----~g~qIL~~iD~~erLpRPk~csedIY~ 346 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-----RGIQILKNIDAGERLPRPKYCSEDIYQ 346 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-----CHHHHHHhccccccCCCCCCChHHHHH
Confidence 22467999999999999999999999999999999664 54442 334445556655555667789999999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++..||..+|++|||+..|.+.+
T Consensus 347 imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 347 IMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHhccCCccccccHHHHHHhH
Confidence 99999999999999999997543
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=323.51 Aligned_cols=254 Identities=20% Similarity=0.304 Sum_probs=204.1
Q ss_pred ccccccCCCCCCceEEEEEeC--------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD--------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
+.+.+.||+|+||.||+|... .+..||+|.++.... ...+.+.+|+.+++++ +||||+++++++...+..
T Consensus 14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 93 (334)
T cd05100 14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 93 (334)
T ss_pred eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCce
Confidence 578889999999999999732 123689999875432 2245789999999999 799999999999999999
Q ss_pred eEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++||||+++|+|.+++.... ...+++.++..++.||+.||.|||+++ ++||||||+|||++.++.
T Consensus 94 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~~ 172 (334)
T cd05100 94 YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDNV 172 (334)
T ss_pred EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCc
Confidence 99999999999999986421 235888999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|||++ |..|+......... .
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~ 247 (334)
T cd05100 173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-----K 247 (334)
T ss_pred EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH-----H
Confidence 9999999988654322 1223467999999998889999999999999999998 77766543222111 1
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
.+........+...+.++.+++.+||+.+|.+|||+.+++..|+.+.....
T Consensus 248 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 248 LLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 111112223344556789999999999999999999999999998876543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=319.27 Aligned_cols=253 Identities=18% Similarity=0.250 Sum_probs=197.0
Q ss_pred cccccccCCCCCCceEEEEEeCC---------------CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccc
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE---------------DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGC 118 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~ 118 (488)
.+++.++||+|+||.||++.... ...||||.++..... ....+.+|++++++++|+||++++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 56788999999999999987532 234899999765322 23468999999999999999999999
Q ss_pred eecCCeeeEEEecCCCCChhhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 119 CCEGEERLLVAEFMPNETLSKHLFHWE----------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 119 ~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
+...+..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||++++
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~ 164 (295)
T cd05097 86 CVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGN 164 (295)
T ss_pred EcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcC
Confidence 999999999999999999999885321 124788999999999999999999999 999999999999999
Q ss_pred CCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhC--CCCCCcchhhhhhc-
Q 011349 189 DGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG--KHIPPSHALDLIRG- 259 (488)
Q Consensus 189 ~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg--~~p~~~~~~~~~~~- 259 (488)
++.+||+|||++....... ...++..|+|||.+.++.++.++|||||||++++|+++ ..|+..........
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 244 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN 244 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence 9999999999987654322 12335689999999888899999999999999999984 44443321111100
Q ss_pred -cccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 260 -KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 260 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
...............+...+..+.+|+.+||+.+|++|||+.+|++.|.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 245 TGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0000000011111223345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=314.09 Aligned_cols=247 Identities=20% Similarity=0.233 Sum_probs=188.4
Q ss_pred ccCCCCCCceEEEEEeCC---CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 60 SEHGEKAPNVVYKGLVDE---DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
++||+|+||.||+|...+ ...+|+|.+...... ....+.+|+.+++.++|+||+++++.+......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 357999999999997433 346888887654322 2346889999999999999999999999999999999999999
Q ss_pred ChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC------
Q 011349 136 TLSKHLFHWE---NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------ 206 (488)
Q Consensus 136 sL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------ 206 (488)
+|.+++.... ....++.....++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 9999986432 233567888999999999999999999 999999999999999999999999998754322
Q ss_pred CccccccCCCCcccccc-------CCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 207 KSYSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
....+++.|+|||++.. ..++.++|||||||++|||++ |..|+.........................+...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKY 239 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccC
Confidence 12334677999998743 356789999999999999999 5555543321111111111111111122233455
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+..+.+++..|| .||++|||+++|++.|.
T Consensus 240 ~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 240 SDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 678889999999 59999999999998863
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=314.05 Aligned_cols=242 Identities=18% Similarity=0.314 Sum_probs=200.1
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCCh---------HHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDS---------RQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
.+.+.||.|++|.||+|.. .+++.||+|.+........ +.+.+|+.++++++||||+++++++...+..+
T Consensus 3 ~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (267)
T cd06628 3 IKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLN 82 (267)
T ss_pred cccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccE
Confidence 4566789999999999984 4688899999875543221 45889999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++.....
T Consensus 83 lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 83 IFLEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred EEEEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 9999999999999996 3466899999999999999999999999 999999999999999999999999998766421
Q ss_pred ----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 207 ----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 207 ----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
....++..|+|||.+.+..++.++|||||||++|+|++|+.||....... ...... .......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~-~~~~~~~~~ 234 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ----AIFKIG-ENASPEIPS 234 (267)
T ss_pred cccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH----HHHHHh-ccCCCcCCc
Confidence 12356789999999998889999999999999999999999886532111 001111 112223444
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+..+.+++.+||+.+|.+||++.+++++
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 235 NISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 567889999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=314.16 Aligned_cols=249 Identities=22% Similarity=0.286 Sum_probs=201.5
Q ss_pred cccccccCCCCCCceEEEEEeC-C---CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-E---DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+++.+.||+|+||.||+|... + +..||+|.++..... ..+.+.+|+.++.+++||||+++++++..++..++||
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVT 84 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence 3467788999999999999843 2 337999998754322 2457899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc-
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS- 208 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~- 208 (488)
||+++++|.+++.. ....+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 85 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd05066 85 EYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162 (267)
T ss_pred EcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence 99999999999964 3356899999999999999999999999 99999999999999999999999999886543321
Q ss_pred ------cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 209 ------YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 209 ------~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
..++..|++||.+.+..++.++|||||||++||+++ |..|+.......... .+......+.+...+..
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 237 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIK-----AIEEGYRLPAPMDCPAA 237 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHH-----HHhCCCcCCCCCCCCHH
Confidence 122457999999998889999999999999999886 888775432211100 01111112233455788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+.+++.+||+.+|.+||++.++++.|..+
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 238 LHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 99999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=311.53 Aligned_cols=249 Identities=16% Similarity=0.169 Sum_probs=203.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.+.||.|+||.||+|.. .+++.+++|.+........+.+.+|+.++++++||||+++++++......+++|||++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence 356778899999999999995 4678899999987665566789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
+++|.+++.. ....+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ...
T Consensus 84 ~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (262)
T cd06613 84 GGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF 161 (262)
T ss_pred CCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence 9999998864 2357999999999999999999999999 999999999999999999999999998765432 234
Q ss_pred ccccCCCCccccccC---CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTG---RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~---~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
.++..|+|||.+.+. .++.++|||||||++|+|+||+.|+................... .....+...+.++.+++
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li 240 (262)
T cd06613 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPP-PKLKDKEKWSPVFHDFI 240 (262)
T ss_pred cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-ccccchhhhhHHHHHHH
Confidence 567889999999776 78999999999999999999998876432111100000000000 01112334567899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||..+|.+|||+.+++.+
T Consensus 241 ~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 241 KKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHcCCChhhCCCHHHHhcC
Confidence 99999999999999999865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=330.11 Aligned_cols=247 Identities=15% Similarity=0.210 Sum_probs=194.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecC------Ce
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 124 (488)
..|.+++.||+|+||.||++.. ..++.||||++..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence 4568889999999999999984 4688999999975432 2245688999999999999999999988643 35
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||++ ++|.+.+. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 97 ~~lv~e~~~-~~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 97 VYLVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred eEEEhhhhc-ccHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 799999997 56766663 34889999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc------------------ccc
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------------------NFL 263 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------------------~~~ 263 (488)
.. ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+......... ...
T Consensus 171 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (355)
T cd07874 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_pred CccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHH
Confidence 43 245679999999999988899999999999999999999998865321100000 000
Q ss_pred cc---------------ccccc---CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 ML---------------MDSCL---EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~---------------~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ..... ....+...+..+.+|+.+||..||++|||+.++++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00 00000 001112234678999999999999999999999997
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=324.76 Aligned_cols=249 Identities=18% Similarity=0.144 Sum_probs=196.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+++. .+++.||||++.... ......+.+|+.++..++|+||+++++++.+.+..|+|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 467889999999999999994 468889999986422 1223457889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++||+|.+++.. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 y~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 82 YYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred CCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 9999999999964 2356899999999999999999999999 9999999999999999999999999987654322
Q ss_pred --ccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 --SYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...||+.|+|||++.+ +.++.++|||||||++|||++|+.||............... ......+......+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~~~ 238 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH-EERFQFPSHITDVSE 238 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcC-CCcccCCCccccCCH
Confidence 2468999999999875 46788999999999999999999998654221111100000 000000111123467
Q ss_pred HHHHHHHHhccCCCCC--CCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRE--RPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~--Rps~~~il~~ 306 (488)
++.+++.+|+..++.+ |++++++++|
T Consensus 239 ~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 239 EAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 8999999999866544 4689999887
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=311.38 Aligned_cols=246 Identities=19% Similarity=0.220 Sum_probs=204.3
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+++.||.|+||.||.+. ..+++.|++|.+.... ......+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 5678889999999999998 5568899999987543 233457899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
++++|.+++.......+++.++..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++....... .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 9999999997544567899999999999999999999999 9999999999999999999999999987654432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+++.|+|||.+.+..++.++||||||+++|||++|..|+........... ..... ....+...+.++.+++.+
T Consensus 161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08221 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK----IVQGN-YTPVVSVYSSELISLVHS 235 (256)
T ss_pred cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHcCC-CCCCccccCHHHHHHHHH
Confidence 4678999999999888889999999999999999999988765322111111 11111 111223456789999999
Q ss_pred hccCCCCCCCCHHHHHHHh
Q 011349 289 CLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l 307 (488)
||..+|.+||++.++++++
T Consensus 236 ~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 236 LLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HcccCcccCCCHHHHhhCc
Confidence 9999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=318.25 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=199.5
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+++.||+|+||.||+|... .+..||+|.++..... ....+.+|+.+++.++||||+++++++......++
T Consensus 7 ~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (288)
T cd05061 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV 86 (288)
T ss_pred HceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence 4577889999999999999743 2457999998754322 23468899999999999999999999998899999
Q ss_pred EEecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 128 VAEFMPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+||++++++.++|+|||+
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~ 165 (288)
T cd05061 87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGM 165 (288)
T ss_pred EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCc
Confidence 999999999999996421 234567889999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCC
Q 011349 200 MKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 200 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
++...... ...++..|+|||.+.++.++.++|||||||++|||++ |..|+.......... .+... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~----~~~~~-~~~ 240 (288)
T cd05061 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK----FVMDG-GYL 240 (288)
T ss_pred cccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH----HHHcC-CCC
Confidence 87543321 2234667999999998889999999999999999999 566654432211111 01111 111
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
..+...++.+.+++.+||+.+|++|||+.++++.|+...
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 241 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 223345678999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=315.40 Aligned_cols=243 Identities=17% Similarity=0.272 Sum_probs=201.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.+++.||.|++|.||+|.. .+++.||+|.+.... ......+.+|+.+++.++|+||+++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 356778889999999999994 468899999987553 233457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
++++|.+++.. .++++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+++..... ..
T Consensus 82 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 82 GGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 99999999853 37999999999999999999999999 999999999999999999999999998766533 24
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh-hHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND-DGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 287 (488)
..+++.|+|||.+.+..++.++|||||||++|+|+||..|+........ ...+........+.. .+..+.+++.
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV-----LFLIPKNNPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH-----HHHhhhcCCCCCcccccCHHHHHHHH
Confidence 4678889999999988899999999999999999999988754321111 001111111112222 5678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..+|++|||+++++.+
T Consensus 233 ~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 233 LCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHhhCChhhCcCHHHHhhC
Confidence 9999999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=327.66 Aligned_cols=236 Identities=20% Similarity=0.204 Sum_probs=188.8
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhc---CCCCCcccccceecCCeeeEEEecCCC
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLL---RSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
||+|+||+||+|.. .+++.||||++...... ....+..|..++... +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999994 56899999998643211 223455677777665 699999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYS 210 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~ 210 (488)
|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||+++.... .....
T Consensus 81 g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 99999886 4567999999999999999999999999 99999999999999999999999999875432 22456
Q ss_pred cccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC-hhhHHHHHHHHHH
Q 011349 211 TNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS-NDDGTELVRLASR 288 (488)
Q Consensus 211 ~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~ 288 (488)
||+.|+|||++.+. .++.++|||||||++|+|+||+.||........... +..... .++ ...+..+.+++.+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~----i~~~~~--~~~~~~~~~~~~~li~~ 231 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRN----IAFGKV--RFPKNVLSDEGRQFVKG 231 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHH----HHcCCC--CCCCccCCHHHHHHHHH
Confidence 89999999998764 478999999999999999999999865432221110 000000 111 1246788999999
Q ss_pred hccCCCCCCC----CHHHHHHH
Q 011349 289 CLQYEPRERP----NAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rp----s~~~il~~ 306 (488)
||..||.+|| ++.++++|
T Consensus 232 ~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 232 LLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred HcCCCHHHCCCCCCCHHHHhcC
Confidence 9999999998 57777775
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=297.79 Aligned_cols=253 Identities=20% Similarity=0.206 Sum_probs=205.1
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC----C----hHHHHHHHHHHhhc-CCCCCccccc
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP----D----SRQFLEEARAVGLL-RSERLVNLIG 117 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----~----~~~~~~E~~~l~~l-~h~niv~~~~ 117 (488)
.+...|..|.-.+.+|.|..++|-++. ..+|..+|+|++...... . .+.-.+|+.+|+++ .||+|+.+.+
T Consensus 11 aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 11 AAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 344445555555667999999999988 567888999998643311 1 23456899999999 5999999999
Q ss_pred ceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 118 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
++..+...++|+|.|+.|.|.|+|. +...+++....+|++|+.+|+.|||.++ ||||||||+|||+|++.++||+||
T Consensus 91 ~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 91 VYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred eccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEecc
Confidence 9999999999999999999999997 5678999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCCC---ccccccCCCCcccccc------CCcccCCceEeehHHHHHHhhCCCCCCcchhhh----hhcccccc
Q 011349 198 GLMKNSRDGK---SYSTNLAFTPPEYLRT------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL----IRGKNFLM 264 (488)
Q Consensus 198 gla~~~~~~~---~~~~t~~y~aPE~~~~------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~----~~~~~~~~ 264 (488)
|++.....+. ..+|||+|+|||.+.. ..|+...|+|++||++|.|+.|.+||+-...-. +..++..
T Consensus 168 GFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyq- 246 (411)
T KOG0599|consen 168 GFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQ- 246 (411)
T ss_pred ceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccc-
Confidence 9999887765 5689999999999864 357889999999999999999998876432111 1111110
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
...+.=.+.+....+||.+||+.||.+|.|++++|+|---
T Consensus 247 -----F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 247 -----FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred -----cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 0111112446778999999999999999999999998543
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=313.60 Aligned_cols=245 Identities=22% Similarity=0.268 Sum_probs=195.3
Q ss_pred cCCCCCCceEEEEEeC-CCc--EEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEKAPNVVYKGLVD-EDR--WIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||+|+||.||+|... ++. .+++|.++.... ...+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 4799999999999954 444 478898875432 2345788999999999 7999999999999989999999999999
Q ss_pred ChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 136 TLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 136 sL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
+|.+++.... ...+++.++..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++.
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCcc
Confidence 9999986421 134889999999999999999999999 9999999999999999999999999986
Q ss_pred cCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 202 NSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 202 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
..... .....+..|+|||++.+..++.++|||||||++|||++ |..||......... ..+........+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~ 235 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-----EKLPQGYRLEKPLN 235 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHH-----HHHhCCCCCCCCCc
Confidence 43211 11223567999999988889999999999999999997 88877543221111 11111111223334
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
.+.++.+++.+||..+|.+|||+.+++..|..+.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 5678999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=317.61 Aligned_cols=248 Identities=18% Similarity=0.236 Sum_probs=202.8
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...+.++++||.|+||.||+|.. .++..||+|.+........+.+.+|++++++++||||+++++.+..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 34568889999999999999995 46889999999765544556789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 84 CDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred cCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 999999998864 3456999999999999999999999999 999999999999999999999999988654332 2
Q ss_pred ccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc-cCCCCChhhHHH
Q 011349 208 SYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC-LEGHFSNDDGTE 281 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 281 (488)
...+++.|++||.+. +..++.++|||||||++|+|++|+.|+........ ........ .....+...+.+
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 237 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV----LLKILKSEPPTLDQPSKWSSS 237 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH----HHHHhcCCCCCcCCcccCCHH
Confidence 345788999999975 34567899999999999999999988754321110 00011000 011123345678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+++.+||..+|.+||++.+++++
T Consensus 238 ~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 238 FNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHHHHHhccChhhCcCHHHHhcC
Confidence 9999999999999999999999887
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=311.28 Aligned_cols=245 Identities=17% Similarity=0.193 Sum_probs=201.2
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceec-CCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCE-GEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~ 131 (488)
|.+++.||.|++|.||++.. .+++.||||++..... ...+.+.+|++++++++|+|++++++.+.. ....++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 57888999999999999994 4578899999875432 234568899999999999999999988764 4467999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+++++|.+++.......+++.+++.++.+++.||.+||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 99999999997544567999999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...+++.|+|||++.+..++.++|||||||++++|++|+.|+........... .... .....+...++.+.+++.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~li~ 235 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYR----IIEG-KLPPMPKDYSPELGELIA 235 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH----HHhc-CCCCCccccCHHHHHHHH
Confidence 34578899999999988899999999999999999999988764322211111 1111 111233456688999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||+.+|++||++.+++.+
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 236 TMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHhccCcccCCCHHHHhcC
Confidence 9999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=311.54 Aligned_cols=237 Identities=23% Similarity=0.360 Sum_probs=190.7
Q ss_pred cCCCCCCceEEEEEeCC-C----------cEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 61 EHGEKAPNVVYKGLVDE-D----------RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.||+|+||.||+|.... + ..|++|.+...... ...+.+|+.+++.++||||+++++++.. ...++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 57999999999999644 3 25888887655432 6789999999999999999999999987 7789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-------CCeeccCCCccc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-------NPRLSCFGLMKN 202 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-------~~kl~Dfgla~~ 202 (488)
||+++|+|.+++... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||++..
T Consensus 80 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 80 EYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 999999999998742 236899999999999999999999999 99999999999999887 799999999987
Q ss_pred CCCCCccccccCCCCccccccC--CcccCCceEeehHHHHHHhhC-CCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 203 SRDGKSYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 203 ~~~~~~~~~t~~y~aPE~~~~~--~~~~~sDv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
........++..|+|||++.+. .++.++|||||||++|||++| ..|+........ ...... ....+....
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-----~~~~~~--~~~~~~~~~ 230 (259)
T cd05037 158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-----ERFYQD--QHRLPMPDC 230 (259)
T ss_pred cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-----HHHHhc--CCCCCCCCc
Confidence 6665556677889999999876 789999999999999999996 444332211100 000000 011111123
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
..+.+++.+||..+|.+|||+.++++.|+
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 78999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=315.70 Aligned_cols=252 Identities=18% Similarity=0.241 Sum_probs=202.7
Q ss_pred ccccccCCCCCCceEEEEEeCC-----CcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceec-CCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDE-----DRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCE-GEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv 128 (488)
+.+.+.||+|+||.||+|.... +..|++|++..... .....+.+|+.++++++|+||+++++++.. +...+++
T Consensus 8 ~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 87 (280)
T cd05043 8 VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVL 87 (280)
T ss_pred eEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEE
Confidence 4566788999999999999655 67899999875432 224568899999999999999999998766 4678999
Q ss_pred EecCCCCChhhhhccCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 129 AEFMPNETLSKHLFHWEN------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
+||+++++|.+++..... ..+++.+++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++.
T Consensus 88 ~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~~ 166 (280)
T cd05043 88 YPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSRD 166 (280)
T ss_pred EEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCccc
Confidence 999999999999864321 46899999999999999999999999 99999999999999999999999999986
Q ss_pred CCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 203 SRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 203 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
..... ...++..|+|||++.+..++.++|||||||++||+++ |+.|+......... ..+........+
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~ 241 (280)
T cd05043 167 LFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMA-----AYLKDGYRLAQP 241 (280)
T ss_pred ccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHH-----HHHHcCCCCCCC
Confidence 54322 2334678999999988889999999999999999999 88777543221111 111111111223
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
..+++++.+++.+||..+|++|||+.+++..|+.+...
T Consensus 242 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 242 INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 34567899999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=317.05 Aligned_cols=255 Identities=20% Similarity=0.263 Sum_probs=205.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+++++++.||+|+||+||++.. .+++.||+|++..... ...+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 4567888999999999999994 5688999999875432 2346789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KS 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 208 (488)
+++++|.+++. ..+.+++..+..++.+++.||.|||+. + ++||||||+||++++++.++|+|||++...... ..
T Consensus 85 ~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~ 161 (284)
T cd06620 85 MDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT 161 (284)
T ss_pred CCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence 99999999886 345799999999999999999999974 6 999999999999999999999999998754322 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh---hc----cccccccccccCCCCC-hhhHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI---RG----KNFLMLMDSCLEGHFS-NDDGT 280 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~---~~----~~~~~~~~~~~~~~~~-~~~~~ 280 (488)
..++..|+|||++.+..++.++|||||||++|+|+||+.||........ .. .......... ....+ ...+.
T Consensus 162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 240 (284)
T cd06620 162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLPSSDFPE 240 (284)
T ss_pred cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCCchhcCH
Confidence 5678999999999888899999999999999999999998764322100 00 0011111111 11111 22567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+.+++.+||..||++|||+.+++++..-++.
T Consensus 241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 241 DLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 89999999999999999999999998654443
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=325.16 Aligned_cols=247 Identities=15% Similarity=0.201 Sum_probs=194.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC------Ce
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 124 (488)
..|.+++.||+|+||.||+|.. ..++.||||++.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 3567888999999999999994 468889999997543 22345788999999999999999999987543 35
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.|+||||++ ++|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 104 VYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred EEEEEeCCC-CCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 799999997 57777764 34889999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-------------------
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF------------------- 262 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~------------------- 262 (488)
.. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||............+
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (364)
T cd07875 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 257 (364)
T ss_pred CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHH
Confidence 43 24567899999999999999999999999999999999999886532111000000
Q ss_pred --------------cccccccc---CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 --------------LMLMDSCL---EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 --------------~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........ ........+..+.+|+.+||..||.+|||+.++++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 001111124578999999999999999999999997
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-41 Score=321.61 Aligned_cols=246 Identities=19% Similarity=0.236 Sum_probs=200.6
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 130 (488)
..|.++++||+||.+.||++...+.+.+|+|++..... .....|.+|+..|.+|+ |.+||++++|-..++.+|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 46889999999999999999987778899998765432 23567999999999995 9999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|-+ -+|..+|.........| .+..++.|++.++.++|.+| |||.||||.|+|+- .|.+||+|||+|..+....
T Consensus 441 ~Gd-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred ccc-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCccccce
Confidence 986 89999997644333334 78889999999999999999 99999999999997 6799999999999876543
Q ss_pred ---ccccccCCCCccccccC-----------CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC
Q 011349 208 ---SYSTNLAFTPPEYLRTG-----------RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~-----------~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
+.+||+.||+||.+... +.+++|||||||||||+|+.|++||.... . ....+..+.++...-+
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-n--~~aKl~aI~~P~~~Ie 593 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-N--QIAKLHAITDPNHEIE 593 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-H--HHHHHHhhcCCCcccc
Confidence 56899999999998542 36789999999999999999998764321 1 1223344444433334
Q ss_pred CChhh-HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 274 FSNDD-GTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 274 ~~~~~-~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
++... ..++++++..||..||.+|||+.++|+|
T Consensus 594 fp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 594 FPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 44322 2349999999999999999999999987
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=314.79 Aligned_cols=243 Identities=16% Similarity=0.272 Sum_probs=203.2
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+..++.||.|+||.||+|.. .++..||||++..... .....+.+|+.++++++||||+++++++..+...++||||++
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCC
Confidence 45678899999999999995 4688999999875432 234578999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 209 (488)
|++|.+++. ..++++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 86 ~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06640 86 GGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccc
Confidence 999999985 356899999999999999999999999 9999999999999999999999999987654322 33
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.++..|+|||.+.+..++.++|||||||++|||+||..|+........ ............+...+..+.+++.+|
T Consensus 162 ~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06640 162 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----LFLIPKNNPPTLTGEFSKPFKEFIDAC 236 (277)
T ss_pred cCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----hhhhhcCCCCCCchhhhHHHHHHHHHH
Confidence 567889999999988899999999999999999999988754321111 111111222334456778899999999
Q ss_pred ccCCCCCCCCHHHHHHHh
Q 011349 290 LQYEPRERPNAKSLVASL 307 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l 307 (488)
|..+|++||++.+++.+-
T Consensus 237 l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06640 237 LNKDPSFRPTAKELLKHK 254 (277)
T ss_pred cccCcccCcCHHHHHhCh
Confidence 999999999999999883
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=325.07 Aligned_cols=249 Identities=19% Similarity=0.239 Sum_probs=195.4
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecC------C
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEG------E 123 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 123 (488)
...|.+++.||.|+||.||+|. ..+++.||||++..... ...+.+.+|+.++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 3456788999999999999999 45788999999875431 2235678999999999999999999988543 3
Q ss_pred eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
..+++++++ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred cEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccceec
Confidence 478999998 789988874 456999999999999999999999999 999999999999999999999999999875
Q ss_pred CCC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-------cccccc----------
Q 011349 204 RDG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------GKNFLM---------- 264 (488)
Q Consensus 204 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------~~~~~~---------- 264 (488)
... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... ......
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07878 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHA 248 (343)
T ss_pred CCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhH
Confidence 543 34578999999999876 56889999999999999999999888653211000 000000
Q ss_pred --cccc---ccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 --LMDS---CLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 --~~~~---~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... .... ......++.+.+|+.+||..||.+|||+.+++.|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 249 RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000 0001234567899999999999999999999987
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=315.93 Aligned_cols=256 Identities=14% Similarity=0.195 Sum_probs=201.9
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccce
Q 011349 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCC 119 (488)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 119 (488)
++.++....+. +.+.+.||.|+||.||+|.. .+++.||+|++.... .....+..|+.++.++ +|+||+++++++
T Consensus 7 ~~~~~~~~~~~---~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 7 DLSALRDPAGI---FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhcChhhh---hhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 44444444444 46777889999999999994 568899999986543 2345788999999999 699999999998
Q ss_pred ec------CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 120 CE------GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 120 ~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
.. ....++||||+++|+|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEE
Confidence 53 457899999999999999997655566899999999999999999999999 99999999999999999999
Q ss_pred eccCCCcccCCC----CCccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccc
Q 011349 194 LSCFGLMKNSRD----GKSYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 194 l~Dfgla~~~~~----~~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 264 (488)
|+|||++..... .....+++.|+|||.+. +..++.++|||||||++|||++|..||....... ....
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~----~~~~ 237 (282)
T cd06636 162 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR----ALFL 237 (282)
T ss_pred EeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh----hhhh
Confidence 999999875432 23456788999999986 3467889999999999999999998875432110 0111
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..............+..+.+++.+||..||.+|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 238 IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 111111111223456789999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=312.68 Aligned_cols=244 Identities=19% Similarity=0.270 Sum_probs=200.3
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+.+.||.|+||.||+|...+++.+|||.+...... ....+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 4567788999999999999878999999998754321 1245889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
||++|++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 82 EFVPGGSISSILN--RFGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred ecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 9999999999996 3456899999999999999999999999 99999999999999999999999999875421
Q ss_pred ------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc-ccCCCCChhh
Q 011349 206 ------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS-CLEGHFSNDD 278 (488)
Q Consensus 206 ------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 278 (488)
.....++..|+|||++.+..++.++|||||||++|+|++|..||........ ....... ......+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 234 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA----MFYIGAHRGLMPRLPDSF 234 (265)
T ss_pred ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH----HHHhhhccCCCCCCCCCC
Confidence 1134578899999999988899999999999999999999988754211100 0000000 1112234456
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.++.+++.+||..+|++||++.+++.+
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 7889999999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=322.82 Aligned_cols=249 Identities=18% Similarity=0.146 Sum_probs=196.1
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||++... +++.||+|++.... ......+..|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 4578889999999999999954 57889999986421 1123458889999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|+++|+|.+++.+ ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999999999964 2456899999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 -KSYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....||+.|+|||++. ...++.++|||||||++|||++|+.||............... ......+.....+++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~s~ 238 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH-KERFQFPAQVTDVSE 238 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-CccccCCCccccCCH
Confidence 1346899999999986 246788999999999999999999998654221111110000 000001111234578
Q ss_pred HHHHHHHHhccCCCCC--CCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRE--RPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~--Rps~~~il~~ 306 (488)
++.+++.+|+..++.+ |+++.++++|
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 239 DAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 8999999998655444 6899999988
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=334.13 Aligned_cols=242 Identities=19% Similarity=0.179 Sum_probs=191.3
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+.+.+.||+|+||.||+|... .++.||||... ...+.+|+++|++++|+|||++++++..++..++|||++.
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~- 243 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR- 243 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence 577888999999999999954 58889999643 2346789999999999999999999999999999999995
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC------Cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KS 208 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~ 208 (488)
++|.+++.. ....+++.+++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 244 ~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 321 (461)
T PHA03211 244 SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG 321 (461)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence 788888754 3346999999999999999999999999 999999999999999999999999998765322 13
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchh------------hhhhccccc-ccccc-------
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL------------DLIRGKNFL-MLMDS------- 268 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~------------~~~~~~~~~-~~~~~------- 268 (488)
..||+.|+|||++.+..++.++|||||||++|||++|..++..... ..+...... ..+..
T Consensus 322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~ 401 (461)
T PHA03211 322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV 401 (461)
T ss_pred cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHH
Confidence 4689999999999999999999999999999999998765432110 001000000 00000
Q ss_pred ---------ccCCC-----CC--hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 ---------CLEGH-----FS--NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ---------~~~~~-----~~--~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..... +. ...+..+.+|+.+||+.||.+|||+.|+|+|
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 402 SQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000 00 0123578899999999999999999999987
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=316.79 Aligned_cols=249 Identities=22% Similarity=0.305 Sum_probs=199.5
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
++.+++.||+|+||.||+|... ++..||+|++...... ....+.+|+.++++++||||+++++++..+...++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (288)
T cd05050 6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCL 85 (288)
T ss_pred hceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEE
Confidence 3467888999999999999853 4678999998754322 24568899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec
Q 011349 128 VAEFMPNETLSKHLFHWE--------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~ 187 (488)
||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+||+++
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~ 164 (288)
T cd05050 86 LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVG 164 (288)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEec
Confidence 999999999999986321 134788999999999999999999999 99999999999999
Q ss_pred CCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcc
Q 011349 188 QDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGK 260 (488)
Q Consensus 188 ~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~ 260 (488)
+++.++|+|||++....... ....+..|+|||.+.+..++.++|||||||++|||++ |..|+.........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~-- 242 (288)
T cd05050 165 ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVI-- 242 (288)
T ss_pred CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH--
Confidence 99999999999987543221 2233567999999988889999999999999999998 76666443221111
Q ss_pred ccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 261 NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
.. +........+...+.++.+++.+||+.+|.+|||+.++++.|++
T Consensus 243 --~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 243 --YY-VRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --HH-HhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 00 11111112233456889999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=315.41 Aligned_cols=249 Identities=18% Similarity=0.253 Sum_probs=201.0
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
++++++.||+|+||.||++... ++..||+|.+.... ......+.+|+.++++++||||+++++.+...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 4678899999999999999954 78999999987542 122457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cc
Q 011349 133 PNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 208 (488)
+|++|..++.... ...+++..+..++.|++.||.|||+. + ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT 160 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence 9999998886321 23799999999999999999999974 6 999999999999999999999999998765332 23
Q ss_pred cccccCCCCccccccCC------cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 209 YSTNLAFTPPEYLRTGR------VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~------~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
..+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||......... ........ ......+...+.++
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ 238 (286)
T cd06622 161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF-AQLSAIVD-GDPPTLPSGYSDDA 238 (286)
T ss_pred CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH-HHHHHHhh-cCCCCCCcccCHHH
Confidence 45778999999986543 478999999999999999999987543221110 01111111 11223444567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+||..+|++||++.+++.+
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 239 QDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHHHHHHcccCcccCCCHHHHhcC
Confidence 999999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=315.61 Aligned_cols=252 Identities=19% Similarity=0.267 Sum_probs=196.7
Q ss_pred ccccccCCCCCCceEEEEEeC-----------------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCccccc
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-----------------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIG 117 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~ 117 (488)
+.+.+.||+|+||.||++... ++..||+|+++..... ....+.+|+.+++.++|+||+++++
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~ 86 (296)
T cd05095 7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLA 86 (296)
T ss_pred ceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 467888999999999998532 2346899999765322 2457899999999999999999999
Q ss_pred ceecCCeeeEEEecCCCCChhhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 118 CCCEGEERLLVAEFMPNETLSKHLFHWE---------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 118 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
++...+..++||||+++++|.+++.... ...+++.++..++.||+.||.|||+.+ ++||||||+|||++.
T Consensus 87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~~ 165 (296)
T cd05095 87 VCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGK 165 (296)
T ss_pred EEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEcC
Confidence 9999999999999999999999986421 124778899999999999999999999 999999999999999
Q ss_pred CCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh--CCCCCCcchhhhhhc-
Q 011349 189 DGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--GKHIPPSHALDLIRG- 259 (488)
Q Consensus 189 ~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t--g~~p~~~~~~~~~~~- 259 (488)
++.++|+|||+++...... ...+++.|++||...++.++.++|||||||++|||+| |..|+..........
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 245 (296)
T cd05095 166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIEN 245 (296)
T ss_pred CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHH
Confidence 9999999999988654322 2233578999999888889999999999999999998 555553321111100
Q ss_pred -cccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 260 -KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 260 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
...............+..++..+.+++.+||+.||.+||++.+|++.|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 246 TGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0000000000111223345688999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=314.59 Aligned_cols=259 Identities=15% Similarity=0.173 Sum_probs=202.1
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccc
Q 011349 41 FNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGC 118 (488)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~ 118 (488)
+.++.+..++++| .+++.||+|+||.||+|.. .+++.+|+|++.... .....+.+|+.+++.+ +||||++++++
T Consensus 8 ~~~~~~~~~~~~~---~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 83 (286)
T cd06638 8 IIFDSFPDPSDTW---EIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGM 83 (286)
T ss_pred EEeecCCCcccce---eeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeee
Confidence 4455555666666 6788899999999999984 568899999986533 2245788999999999 69999999998
Q ss_pred ee-----cCCeeeEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 119 CC-----EGEERLLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 119 ~~-----~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
+. .++..++||||++|++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGG 162 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCC
Confidence 74 345689999999999999887531 3456899999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCC----CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc
Q 011349 192 PRLSCFGLMKNSRDG----KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 262 (488)
++|+|||++...... ....+++.|+|||.+.. ..++.++|||||||++|||++|+.|+......... ...
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~-~~~ 241 (286)
T cd06638 163 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL-FKI 241 (286)
T ss_pred EEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH-hhc
Confidence 999999998765432 23467899999999853 44788999999999999999999887543211100 000
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.... ......+...+..+.+++.+||+.+|++|||+.++++++
T Consensus 242 ~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 242 PRNP--PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred cccC--CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0000 001111223456799999999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=318.55 Aligned_cols=244 Identities=16% Similarity=0.217 Sum_probs=185.4
Q ss_pred cccCCCCCCceEEEEEeC---CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeEEEecCC
Q 011349 59 VSEHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLLVAEFMP 133 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~ 133 (488)
.++||+|+||.||+|... +++.||+|.+.... ....+.+|+.++++++||||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 357899999999999853 46789999987543 23567899999999999999999998854 456899999996
Q ss_pred CCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee----cCCCCCeeccCCCccc
Q 011349 134 NETLSKHLFHW-------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKN 202 (488)
Q Consensus 134 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~ 202 (488)
++|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 6888776421 1235899999999999999999999999 9999999999999 4567899999999976
Q ss_pred CCCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc---------------
Q 011349 203 SRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG--------------- 259 (488)
Q Consensus 203 ~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~--------------- 259 (488)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||++|++||.....+....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 5432 23467899999999977 458899999999999999999998875321110000
Q ss_pred -----ccc---c------cccccccCCC------------CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 -----KNF---L------MLMDSCLEGH------------FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 -----~~~---~------~~~~~~~~~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+ . .......... .....+..+.+|+.+||+.||.+|||++++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 0 0000000000 000123467899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=311.91 Aligned_cols=250 Identities=23% Similarity=0.294 Sum_probs=201.4
Q ss_pred ccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+.+.+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++.+ ...++|||
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e 86 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVME 86 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEE
Confidence 4667888999999999998533 2468999987554 2234579999999999999999999998865 56789999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 87 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 164 (270)
T cd05056 87 LAPLGELRSYLQV-NKYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK 164 (270)
T ss_pred cCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeeccccccee
Confidence 9999999999964 2346899999999999999999999999 9999999999999999999999999987654332
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...++..|+|||.+.+..++.++||||||+++||+++ |..||.......... .+........+..++..+.+
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 239 (270)
T cd05056 165 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG-----RIENGERLPMPPNCPPTLYS 239 (270)
T ss_pred cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-----HHHcCCcCCCCCCCCHHHHH
Confidence 1223467999999988889999999999999999986 888875542211110 01111111234456788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 285 LASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
++.+||..+|.+|||+.+++..|..+...
T Consensus 240 li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 240 LMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-40 Score=308.81 Aligned_cols=245 Identities=17% Similarity=0.212 Sum_probs=202.0
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.+.||+|+||.||+|... ++..|++|.+..... .+.+.+|++++++++|+||+++++++..+...++++||++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 3567788899999999999965 488999999875532 6789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 209 (488)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....... ..
T Consensus 82 ~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (256)
T cd06612 82 AGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV 159 (256)
T ss_pred CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence 9999999854 3467899999999999999999999999 9999999999999999999999999988655432 23
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.++..|+|||++.+..++.++||||||+++|+|++|+.|+........... .... .......+...+..+.+++.+|
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~i~~~ 236 (256)
T cd06612 160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM-IPNK--PPPTLSDPEKWSPEFNDFVKKC 236 (256)
T ss_pred cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh-hccC--CCCCCCchhhcCHHHHHHHHHH
Confidence 468899999999988899999999999999999999988754321110000 0000 0001112334557899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|+.+|.+|||+.+++.+
T Consensus 237 l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 237 LVKDPEERPSAIQLLQH 253 (256)
T ss_pred HhcChhhCcCHHHHhcC
Confidence 99999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=321.73 Aligned_cols=243 Identities=12% Similarity=0.156 Sum_probs=190.9
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.+++.||+|+||.||+|... ++..||+|+.... ....|+.++++++||||+++++++......++|||++.
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence 4688899999999999999954 5778999985432 23579999999999999999999999999999999995
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Cccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 210 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~ 210 (488)
++|.+++.. ....+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 141 -~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 141 -SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred -CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 688888854 3457999999999999999999999999 999999999999999999999999998754322 2456
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhh----h--hcccccccc------cc----------
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL----I--RGKNFLMLM------DS---------- 268 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~----~--~~~~~~~~~------~~---------- 268 (488)
||+.|+|||++.+..++.++|||||||++|||+++..++....... . ....+...+ ..
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRL 297 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHH
Confidence 8999999999999899999999999999999999766543211000 0 000000000 00
Q ss_pred ---------ccCCCC-------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 ---------CLEGHF-------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ---------~~~~~~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+..+ ....+..+.+||.+||+.||.+|||+.++++|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 298 VRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 000000 01234566789999999999999999999987
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=312.06 Aligned_cols=251 Identities=18% Similarity=0.263 Sum_probs=203.2
Q ss_pred cccccccCCCCCCceEEEEEeC-CCc----EEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDR----WIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++++++.||+|+||.||+|... +|. .||+|.+...... ....+.+|+.++.+++||||+++++++.. ...++|
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v 86 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLI 86 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEE
Confidence 3467788999999999999843 343 5899998765432 24578899999999999999999999876 789999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS 208 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 208 (488)
|||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 87 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 164 (279)
T cd05057 87 TQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164 (279)
T ss_pred EecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence 999999999999864 3345999999999999999999999998 99999999999999999999999999986543321
Q ss_pred ------cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 209 ------YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 209 ------~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
..++..|+|||.+....++.++|||||||++||+++ |+.|+......... ..+........+..++..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 239 (279)
T cd05057 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIP-----DLLEKGERLPQPPICTID 239 (279)
T ss_pred ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHH-----HHHhCCCCCCCCCCCCHH
Confidence 122467999999988889999999999999999999 88887654222111 111111112223345678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+++.+||..+|..||++.++++.|..+.+.
T Consensus 240 ~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 240 VYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=308.36 Aligned_cols=243 Identities=19% Similarity=0.285 Sum_probs=207.2
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+-+.||+|.|.+|-+|+ .-+|..||||++.+....+ ...+.+|++.|+-++|||||++|.+......+|||.|+-
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG 99 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG 99 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence 3445667999999999998 4589999999998766544 347899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCcccCCCC---Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG---KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~---~~ 208 (488)
++|+|.++|.+.. ..+++....+++.||+.|+.|+|+.. +|||||||+||.+- .-|-|||.|||++-...++ .+
T Consensus 100 D~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 100 DGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred CCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence 9999999998644 44999999999999999999999998 99999999999874 5689999999998776655 47
Q ss_pred cccccCCCCccccccCCcc-cCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~-~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
.+|+..|.|||.+.|..|+ ++.||||||||||.|++|++||...... +.+..+++= .-..|...+.+..+||.
T Consensus 178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS----ETLTmImDC--KYtvPshvS~eCrdLI~ 251 (864)
T KOG4717|consen 178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS----ETLTMIMDC--KYTVPSHVSKECRDLIQ 251 (864)
T ss_pred ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch----hhhhhhhcc--cccCchhhhHHHHHHHH
Confidence 7999999999999998885 5899999999999999999998754222 122222221 12456778899999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
.||..||.+|.+.++|..+
T Consensus 252 sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 252 SMLVRDPKKRASLEEIVST 270 (864)
T ss_pred HHHhcCchhhccHHHHhcc
Confidence 9999999999999999876
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=319.61 Aligned_cols=247 Identities=19% Similarity=0.193 Sum_probs=202.4
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+++.+.||+|+||.||+|... +++.||||.+...... ..+.+..|+++++.++|+||+++++++..+...++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 3567788999999999999954 5899999999765433 34568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|+.|++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 999999999987544567999999999999999999999999 999999999999999999999999987654221
Q ss_pred -----------------------------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh
Q 011349 207 -----------------------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI 257 (488)
Q Consensus 207 -----------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~ 257 (488)
....||..|+|||++.+..++.++||||||+++|+|++|..|+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 123567889999999988899999999999999999999998865432211
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCC----HHHHHHH
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN----AKSLVAS 306 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~il~~ 306 (488)
+................+..+.+++.+||..+|++||| +.+++.+
T Consensus 241 ----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 241 ----FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred ----HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 11111111111111125788999999999999999999 8888875
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=312.14 Aligned_cols=249 Identities=20% Similarity=0.290 Sum_probs=199.4
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.++..||.|+||.||+|... ....|++|.+...... ..+.+.+|++++++++|+||+++++++......++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (275)
T cd05046 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYM 85 (275)
T ss_pred hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceE
Confidence 3467888999999999999853 2457999998754433 24679999999999999999999999988889999
Q ss_pred EEecCCCCChhhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 128 VAEFMPNETLSKHLFHWEN-------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
||||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEcccccc
Confidence 9999999999999974331 26899999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCC-----CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCC
Q 011349 201 KNSRDG-----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 201 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
...... ....++..|+|||.+.+...+.++||||||+++|+|++ |..|+.......... ...........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~ 240 (275)
T cd05046 165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLN----RLQAGKLELPV 240 (275)
T ss_pred cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHH----HHHcCCcCCCC
Confidence 754321 22345677999999988888999999999999999999 555654321111100 11101111122
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+...+..+.+++.+||..+|.+|||+.+++..|.
T Consensus 241 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 241 PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 3345688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=314.89 Aligned_cols=249 Identities=20% Similarity=0.230 Sum_probs=196.1
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+++.||+|++|.||+|.. .++..||||+++.... .....+.+|+.++++++||||+++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence 56778899999999999995 4689999999875432 22457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 133 PNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+ ++|.+++.... +..+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (285)
T cd07861 82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT 159 (285)
T ss_pred C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence 7 68888875432 357999999999999999999999999 999999999999999999999999998754322 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc--------------------cccccc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------------------NFLMLM 266 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------------------~~~~~~ 266 (488)
...+++.|+|||.+.+ ..++.++|||||||++|+|+||++|+........... ......
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (285)
T cd07861 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF 239 (285)
T ss_pred CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence 2355789999998875 4478899999999999999999988764321100000 000000
Q ss_pred ccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.... .......++++.+++.+||..||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000 00112346788999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-40 Score=311.21 Aligned_cols=248 Identities=20% Similarity=0.223 Sum_probs=197.4
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC----------ChHHHHHHHHHHhhcCCCCCcccccceecCCe
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP----------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 124 (488)
+.+.+.||.|+||.||+|. ..+|+.||||.++..... ..+.+.+|+.+++.++||||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 4566788999999999998 456889999988643211 02357889999999999999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||+|+||+++.++.++|+|||+++...
T Consensus 83 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred eEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 9999999999999999863 367999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC------CccccccCCCCccccccCC--cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 205 DG------KSYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 205 ~~------~~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
.. ....++..|+|||.+.... ++.++||||||+++|++++|..|+...........................
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM 239 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccc
Confidence 32 2345788999999987654 789999999999999999999887533211100000000011111112223
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+..+.+++.+||..+|.+|||+.+++.|
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 240 NLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 456889999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=327.89 Aligned_cols=244 Identities=18% Similarity=0.211 Sum_probs=196.1
Q ss_pred cccccccCCCCCCceEEEEEeC---CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||++... .+..||||.+... ..+.+|+++|++++||||+++++++......++|||+
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 4688999999999999999743 3577999988643 3456899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+. ++|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||+++......
T Consensus 168 ~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~ 243 (392)
T PHA03207 168 YK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243 (392)
T ss_pred cC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence 96 78888884 4567999999999999999999999999 9999999999999999999999999987654321
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhh--------hhc---cc--cc--------c
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL--------IRG---KN--FL--------M 264 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~--------~~~---~~--~~--------~ 264 (488)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ... .. +. .
T Consensus 244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 323 (392)
T PHA03207 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK 323 (392)
T ss_pred ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence 3468999999999998899999999999999999999999886532110 000 00 00 0
Q ss_pred ---ccccccCCCCC-------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 265 ---LMDSCLEGHFS-------NDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 265 ---~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
......+..+. ...+.++.++|.+||..||++|||+.+++.+-
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p 376 (392)
T PHA03207 324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP 376 (392)
T ss_pred HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 00000011110 12346788999999999999999999999983
|
|
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=309.22 Aligned_cols=246 Identities=17% Similarity=0.197 Sum_probs=186.6
Q ss_pred cCCCCCCceEEEEEeCCC---cEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGLVDED---RWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
+||+|+||.||+|...++ ..+++|.+..... ...+.+.+|+.+++.++||||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 579999999999984433 3466777665432 235679999999999999999999999999899999999999999
Q ss_pred hhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC------CCc
Q 011349 137 LSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------GKS 208 (488)
Q Consensus 137 L~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~~~ 208 (488)
|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++..... ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 999986421 234677788899999999999999999 99999999999999999999999999864321 223
Q ss_pred cccccCCCCcccccc-------CCcccCCceEeehHHHHHHhhCCC-CCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 209 YSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLSGKH-IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~il~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
..++..|+|||++.+ ..++.++|||||||++|||+++.. |+......................+..+...++
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE 240 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence 456789999998753 245789999999999999998654 443221111111101111111112223334567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+.+++..|| .+|++||++++|++.|.
T Consensus 241 ~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 241 RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 8899999999 67999999999998774
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=309.30 Aligned_cols=250 Identities=20% Similarity=0.283 Sum_probs=201.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+.+.+.||.|+||.||+|.. .++..||+|++..... .....+.+|+++++.++|+||+++++.+..++..++|||++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 357788899999999999994 4688899999975442 24567999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 133 PNETLSKHLFHWEN-QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999964322 56899999999999999999999999 9999999999999999999999999987654432
Q ss_pred ----ccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC-CChhhHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH-FSNDDGTE 281 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 281 (488)
...++..|+|||.+... .++.++|||||||++|+|++|+.|+............... ........ .....+..
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGADYKKYSKS 239 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC-CCCCcCCccccccccHH
Confidence 23578899999998876 7899999999999999999999887543211110010110 01111111 11245678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+++.+||..||++||++.+++.|
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 240 FRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred HHHHHHHHcCCChhhCcCHHHHhhC
Confidence 9999999999999999999999976
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=308.44 Aligned_cols=245 Identities=16% Similarity=0.192 Sum_probs=203.2
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+++.||+|+||.||++. ..+++.||+|.+..... .....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 5678889999999999999 45688999999875432 23457899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
++++|.+++.......+++.++..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08218 82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART 160 (256)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence 9999999886544456899999999999999999999999 9999999999999999999999999987654432 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+++.|+|||++.+..++.++|||||||++++|+||+.|+.......... ..... .....+...+.++.+++.+
T Consensus 161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08218 161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVL----KIIRG-SYPPVSSHYSYDLRNLVSQ 235 (256)
T ss_pred ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHH----HHhcC-CCCCCcccCCHHHHHHHHH
Confidence 356888999999998889999999999999999999998875432211111 11111 1112344557789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||+.+|.+||++.+++++
T Consensus 236 ~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 236 LFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HhhCChhhCcCHHHHhhC
Confidence 999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=344.41 Aligned_cols=249 Identities=18% Similarity=0.214 Sum_probs=196.0
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 127 (488)
+..|.+++.||+|+||.||+|.. .++..||+|++...... ....|..|+.++++++|||||+++++|.. ...+||
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 34678999999999999999994 45788999998754322 24578999999999999999999998854 356899
Q ss_pred EEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC------CcccccccCCceeecC-----------
Q 011349 128 VAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKG------RALYHDLNTYRILFDQ----------- 188 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~iiH~Dlkp~Nill~~----------- 188 (488)
||||+++|+|.++|... ....+++..++.|+.||+.||.|||+.+ +||||||||+||||+.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 99999999999998642 2357999999999999999999999842 2999999999999964
Q ss_pred ------CCCCeeccCCCcccCCCC---CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh
Q 011349 189 ------DGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI 257 (488)
Q Consensus 189 ------~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~ 257 (488)
.+.+||+|||++...... ....||+.|+|||++.+ ..++.++|||||||+||||+||..||........
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~q 251 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQ 251 (1021)
T ss_pred ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHH
Confidence 235899999999865432 23468999999999864 4588999999999999999999998854311100
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+...+..... ......+.++.+||.+||..+|.+||++.+++.+
T Consensus 252 ----li~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 252 ----LISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred ----HHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 0011111000 0112346789999999999999999999999965
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-40 Score=316.05 Aligned_cols=252 Identities=18% Similarity=0.263 Sum_probs=199.8
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+..|.++++||.|+||.||+|.. .+++.||+|.++..... ....+.+|+.+++.++||||+++++++..++..++||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 345678899999999999999995 46889999998754322 2456789999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 84 EYLD-KDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred eccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 9997 689888864 3456899999999999999999999999 999999999999999999999999998754322
Q ss_pred -CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-----------cccccccccc-----
Q 011349 207 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----------GKNFLMLMDS----- 268 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-----------~~~~~~~~~~----- 268 (488)
....+++.|+|||.+.+ ..++.++|||||||++|||+||++||......... ...+......
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 23356889999999875 45788999999999999999999888654221100 0000000000
Q ss_pred ----ccC----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 ----CLE----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ----~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
... .......++.+.+|+.+||..||.+|||+.+++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000 01112346788999999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-40 Score=316.30 Aligned_cols=249 Identities=19% Similarity=0.309 Sum_probs=198.4
Q ss_pred cccccCCCCCCceEEEEEe-CCCc----EEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDR----WIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+++.||+|+||.||+|.+ .+|. .||+|.+....... ...+.+|+.+++.++||||+++++++.. ...++|+|
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~v~e 88 (303)
T cd05110 10 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQ 88 (303)
T ss_pred eeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-CCceeeeh
Confidence 5667889999999999984 3454 47999887554222 3368899999999999999999998865 45679999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 89 ~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 166 (303)
T cd05110 89 LMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 166 (303)
T ss_pred hcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCccccc
Confidence 9999999999864 3346899999999999999999999999 9999999999999999999999999998654321
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...++..|+|||.+.+..++.++|||||||++|||++ |+.|+........ ...+........+..++..+.
T Consensus 167 ~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd05110 167 NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-----PDLLEKGERLPQPPICTIDVY 241 (303)
T ss_pred ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHCCCCCCCCCCCCHHHH
Confidence 2234678999999998889999999999999999997 7777754322111 111111111122334567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+++.+||..+|++||++.+++..|+.+...
T Consensus 242 ~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 242 MVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=311.43 Aligned_cols=242 Identities=22% Similarity=0.337 Sum_probs=195.8
Q ss_pred cCCCCCCceEEEEEeCC-------CcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 61 EHGEKAPNVVYKGLVDE-------DRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.||+|+||.||+|...+ +..||||.+..... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 47999999999998532 25799999865432 23567899999999999999999999999889999999999
Q ss_pred CCCChhhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-----CCeeccCCCccc
Q 011349 133 PNETLSKHLFHW-----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-----NPRLSCFGLMKN 202 (488)
Q Consensus 133 ~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-----~~kl~Dfgla~~ 202 (488)
++++|.+++... ....+++.++..++.|++.||.|||+.+ ++|+||||+||+++.++ .++|+|||+++.
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 999999998642 2234889999999999999999999999 99999999999999877 899999999876
Q ss_pred CCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 203 SRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 203 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
..... ...++..|+|||.+.++.++.++|||||||++|||+| |..|+........ ...+........+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~-----~~~~~~~~~~~~~ 235 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV-----LQHVTAGGRLQKP 235 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH-----HHHHhcCCccCCc
Confidence 53321 2234678999999998899999999999999999998 8877754321111 1111111112233
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
...+..+.+++.+||..+|.+||++.++++.|+
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 456788999999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-40 Score=313.43 Aligned_cols=249 Identities=22% Similarity=0.269 Sum_probs=197.7
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|++++.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++++++|+||+++++++......++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 3577888999999999999954 689999999865432 2235688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+++++|..++. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 99988887765 3446999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc---cccccc-------c----------
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG---KNFLML-------M---------- 266 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~---~~~~~~-------~---------- 266 (488)
...++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+........ ...... .
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3456789999999876 457889999999999999999998876432110000 000000 0
Q ss_pred ccccCCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DSCLEGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+..... .....+..+.+++.+||..+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000000 011235778999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=310.02 Aligned_cols=242 Identities=19% Similarity=0.242 Sum_probs=194.3
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-----ChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-----DSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv 128 (488)
.+.+.||+|+||.||+|.. .++..||+|++...... ....+.+|+.++++++||||+++++++.. +...+++
T Consensus 5 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~ 84 (266)
T cd06651 5 RRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIF 84 (266)
T ss_pred cccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEE
Confidence 5567779999999999994 56899999998654311 13468899999999999999999998865 3568899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 85 MEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 99999999999986 3456899999999999999999999999 999999999999999999999999998754321
Q ss_pred -----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 207 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
....++..|+|||.+.+..++.++|||||||++|||++|+.||....... .............++...++.
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 237 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA----AIFKIATQPTNPQLPSHISEH 237 (266)
T ss_pred cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH----HHHHHhcCCCCCCCchhcCHH
Confidence 12356889999999998889999999999999999999998875431111 111111111223344455677
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+..++ +||..+|++||++++++.|
T Consensus 238 ~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 238 ARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HHHHH-HHhcCChhhCcCHHHHhcC
Confidence 88888 6888899999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=315.81 Aligned_cols=240 Identities=20% Similarity=0.263 Sum_probs=197.3
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
..||+|+||.||++.. .++..||||.+........+.+.+|+.+++.++|+||+++++.+..++..++||||+++++|.
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence 4579999999999994 468899999987655444567899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----CccccccC
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNLA 214 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~ 214 (488)
+++. ...+++.++..++.||+.||.|||+.+ ++||||||+||++++++.++|+|||++...... ....++..
T Consensus 108 ~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 183 (292)
T cd06658 108 DIVT---HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPY 183 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCcc
Confidence 9884 346899999999999999999999999 999999999999999999999999998754322 23457889
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|+|||.+.+..++.++||||||+++|||++|+.|+......... ............ .....+..+.+++.+||..||
T Consensus 184 y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P 260 (292)
T cd06658 184 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM-RRIRDNLPPRVK--DSHKVSSVLRGFLDLMLVREP 260 (292)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhcCCCccc--cccccCHHHHHHHHHHccCCh
Confidence 99999998888999999999999999999999887643221110 001111111111 112345678999999999999
Q ss_pred CCCCCHHHHHHH
Q 011349 295 RERPNAKSLVAS 306 (488)
Q Consensus 295 ~~Rps~~~il~~ 306 (488)
.+|||+.+++++
T Consensus 261 ~~Rpt~~~il~~ 272 (292)
T cd06658 261 SQRATAQELLQH 272 (292)
T ss_pred hHCcCHHHHhhC
Confidence 999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=317.18 Aligned_cols=246 Identities=24% Similarity=0.373 Sum_probs=198.8
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChH--HHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSR--QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|++++.||+|+||+||++... +++.||+|++......... ...+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 467889999999999999954 5678999999876533222 3456999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC----CCCCc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS----RDGKS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~~~~ 208 (488)
++++|.+++. ....+++..+..++.||++||.+||+.+ ++|+||||+||+++.++.++|+|||.+... .....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred cccccccccc--cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 9889999996 4567999999999999999999999999 999999999999999999999999998753 12234
Q ss_pred cccccCCCCccccc-cCCcccCCceEeehHHHHHHhhCCCCCCcchhh---hhhccccccccccccCCCCChhhHHHHHH
Q 011349 209 YSTNLAFTPPEYLR-TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD---LIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 209 ~~~t~~y~aPE~~~-~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
..++..|+|||.+. +...+.++||||||+++|+|++|..|+...... .............. .......+..+.+
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~ 235 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSS--SQQSREKSEELRD 235 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHH--TTSHTTSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccc--ccccchhHHHHHH
Confidence 56788999999998 788999999999999999999999887654111 00000000000000 0011112478999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+||+.||++|||+.+++++
T Consensus 236 li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 236 LIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHHSSSSGGGSTTHHHHHTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999875
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=307.12 Aligned_cols=245 Identities=18% Similarity=0.210 Sum_probs=202.1
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|++++.||+|+||.||++.. .+++.+|||.+...... ....+.+|+.+++.++||||+++++.+..++..++||||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 56778899999999999994 56888999998765322 3457899999999999999999999999889999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCCCCC---c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDGK---S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~~---~ 208 (488)
++++|.+++.......+++..+..++.+++.||.|||+++ ++|+||||+||+++++ +.++|+|||++....... .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (256)
T cd08220 82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT 160 (256)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence 9999999997544556899999999999999999999999 9999999999999855 457999999998665432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..++..|+|||.+.+..++.++||||||+++|+|++|+.|+.............. ......+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~ 235 (256)
T cd08220 161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS-----GTFAPISDRYSPDLRQLILS 235 (256)
T ss_pred cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh-----cCCCCCCCCcCHHHHHHHHH
Confidence 4578899999999988899999999999999999999988755422211111111 11112333457789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..+|++|||+.+++.+
T Consensus 236 ~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 236 MLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HccCChhhCCCHHHHhhC
Confidence 999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=306.99 Aligned_cols=245 Identities=26% Similarity=0.391 Sum_probs=199.5
Q ss_pred cccccCCCCCCceEEEEEeCC-C----cEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE-D----RWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+++.||.|+||.||++.... + ..||+|++...... ....+..|+.+++.++|+||+++++++.+.+..++|||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456788999999999999543 3 78999999766533 45689999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc--
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS-- 208 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-- 208 (488)
|+++++|.+++.......+++.++..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 999999999996433223999999999999999999999999 99999999999999999999999999876654321
Q ss_pred ---cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 209 ---YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 209 ---~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
..+++.|+|||.+.+..++.++||||||+++++|++ |.+|+.......... .+........+...+.++.+
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 235 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLE-----YLKKGYRLPKPENCPPEIYK 235 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHhcCCCCCCCCcCCHHHHH
Confidence 235688999999988889999999999999999999 666554322211111 11111112233346788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+||..+|++|||+.++++.|
T Consensus 236 ~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 236 LMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHCcCChhhCcCHHHHHhhC
Confidence 99999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=313.39 Aligned_cols=243 Identities=19% Similarity=0.240 Sum_probs=202.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||++.. .+++.||+|++..... ...+.+.+|++++++++||||+++++++..+...++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 457788999999999999994 4689999999875432 234568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Ccc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSY 209 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 209 (488)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||+++..... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 9999999999873 467999999999999999999999999 999999999999999999999999998876543 234
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.+++.|+|||.+.+...+.++||||||+++|+|++|..|+.......... .... ....++...+..+.+++.+|
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~--~~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYE----KILE--GKVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHhc--CCccCCccCCHHHHHHHHHH
Confidence 67899999999988888999999999999999999998876543211111 1111 11123444568899999999
Q ss_pred ccCCCCCCC-----CHHHHHHH
Q 011349 290 LQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rp-----s~~~il~~ 306 (488)
|..+|.+|+ ++.+++.+
T Consensus 233 l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ccCCHHHccCcccCCHHHHHcC
Confidence 999999998 78888876
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=313.63 Aligned_cols=247 Identities=18% Similarity=0.260 Sum_probs=203.4
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
....+.+++.||+|+||.||++.. .++..||+|.+........+.+.+|+.+++.++||||+++++.+...+..++|+|
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 335567888999999999999984 5688899999876554456678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~ 172 (293)
T cd06647 97 YLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 172 (293)
T ss_pred cCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceeccccccccc
Confidence 999999999985 345889999999999999999999999 9999999999999999999999999886544322
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc-ccccCCCCChhhHHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM-DSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l 285 (488)
...+++.|++||.+.+..++.++|||||||++|++++|..||........ ..... ........+...+..+.++
T Consensus 173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l 248 (293)
T cd06647 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LYLIATNGTPELQNPEKLSAIFRDF 248 (293)
T ss_pred ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh----eeehhcCCCCCCCCccccCHHHHHH
Confidence 33577889999999888899999999999999999999988764321110 00000 0111111223346789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||..+|++||++.+++.|
T Consensus 249 i~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 249 LNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHccCChhhCcCHHHHhcC
Confidence 999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=314.31 Aligned_cols=246 Identities=20% Similarity=0.228 Sum_probs=199.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||+|.. .+++.||+|++....... ...+.+|+.+++.++||||+++++++..++..++|||
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e 95 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVME 95 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHH
Confidence 356777899999999999995 468899999987543222 2468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYS 210 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 210 (488)
|++ |+|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++..........
T Consensus 96 ~~~-g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~ 172 (307)
T cd06607 96 YCL-GSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFV 172 (307)
T ss_pred hhC-CCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCCcc
Confidence 997 677776643 3456999999999999999999999999 9999999999999999999999999998776666677
Q ss_pred cccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 211 TNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 211 ~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
+++.|+|||++. ...++.++||||||+++|||+||.+|+........... ..........+...+..+.+++.
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~ 248 (307)
T cd06607 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----IAQNDSPTLSSNDWSDYFRNFVD 248 (307)
T ss_pred CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH----HhcCCCCCCCchhhCHHHHHHHH
Confidence 889999999874 35688999999999999999999988754321111000 00000011112235678999999
Q ss_pred HhccCCCCCCCCHHHHHHHh
Q 011349 288 RCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l 307 (488)
+||..+|++||++.+++.+.
T Consensus 249 ~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 249 SCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred HHhcCChhhCcCHHHHhcCh
Confidence 99999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=314.26 Aligned_cols=240 Identities=20% Similarity=0.244 Sum_probs=198.1
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
..||+|+||.||+|.. .+++.||||.+........+.+.+|+.+++.++||||+++++++..++..++||||+++++|.
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 106 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence 4679999999999994 468899999997655455667899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----CccccccC
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNLA 214 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~ 214 (488)
.++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....++..
T Consensus 107 ~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 182 (297)
T cd06659 107 DIVS---QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPY 182 (297)
T ss_pred HHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCcc
Confidence 9874 356899999999999999999999999 999999999999999999999999998754332 23467899
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|+|||++.+..++.++|||||||++|||++|+.|+.......... ........ ........+..+.+++.+||..+|
T Consensus 183 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~l~~~i~~~l~~~P 259 (297)
T cd06659 183 WMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-RLRDSPPP--KLKNAHKISPVLRDFLERMLTREP 259 (297)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhccCCC--CccccCCCCHHHHHHHHHHhcCCc
Confidence 999999998889999999999999999999998875432111100 00000000 011122345779999999999999
Q ss_pred CCCCCHHHHHHH
Q 011349 295 RERPNAKSLVAS 306 (488)
Q Consensus 295 ~~Rps~~~il~~ 306 (488)
.+||++.+++++
T Consensus 260 ~~Rps~~~ll~~ 271 (297)
T cd06659 260 QERATAQELLDH 271 (297)
T ss_pred ccCcCHHHHhhC
Confidence 999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-40 Score=308.29 Aligned_cols=245 Identities=21% Similarity=0.230 Sum_probs=203.0
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
|++.+.||.|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++||||+++++++..+...++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 467888999999999999954 688999999975432 2356789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Cc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KS 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~ 208 (488)
+.|++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 82 LLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence 999999999963 357999999999999999999999999 999999999999999999999999998765543 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..++..|+|||.+.+..++.++|+||||+++|+|++|..|+....... ...+...... .....+...+..+.+++.+
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~ 235 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RDQIRAKQET-ADVLYPATWSTEAIDAINK 235 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HHHHHHHhcc-ccccCcccCcHHHHHHHHH
Confidence 457789999999988889999999999999999999998876543110 0001111111 2233445567899999999
Q ss_pred hccCCCCCCCCH--HHHHHH
Q 011349 289 CLQYEPRERPNA--KSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~--~~il~~ 306 (488)
||..||.+||++ ++++++
T Consensus 236 ~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 236 LLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred HccCChhHcCCccHHHHhcC
Confidence 999999999999 776643
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=308.86 Aligned_cols=243 Identities=19% Similarity=0.205 Sum_probs=195.7
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-----ChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-----DSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
+.+.+.||+|+||.||+|.. .++..||||.+...... ..+.+.+|+.++++++||||+++++++.+. ..+++
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence 46677889999999999994 56899999998643211 134688899999999999999999988663 46889
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++....
T Consensus 84 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 84 FMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence 9999999999999863 356889999999999999999999999 99999999999999999999999999875432
Q ss_pred -----CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 206 -----GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 206 -----~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
.....++..|+|||.+.+..++.++|||||||++|||++|+.|+........ .............+...+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 236 (265)
T cd06652 161 LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA----IFKIATQPTNPVLPPHVSD 236 (265)
T ss_pred ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH----HHHHhcCCCCCCCchhhCH
Confidence 1234578899999999888899999999999999999999988754311111 1111111122334455667
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+++.+|+. +|.+||++++++.+
T Consensus 237 ~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 237 HCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 88999999994 99999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=313.15 Aligned_cols=248 Identities=19% Similarity=0.181 Sum_probs=194.4
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+++.||+|+||.||+|.. .+|+.||+|.++..... ....+.+|+.++++++||||+++++++.+....++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 46778899999999999995 56899999998754322 2346788999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||+++..... ..
T Consensus 82 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 82 D-QDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred C-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 7 578887754 3456999999999999999999999999 999999999999999999999999998865432 23
Q ss_pred cccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchh-hhhhcc--------------ccccccccccC-
Q 011349 209 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHAL-DLIRGK--------------NFLMLMDSCLE- 271 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~-~~~~~~--------------~~~~~~~~~~~- 271 (488)
..+++.|+|||.+.+. .++.++|||||||++|+|+||+.|+..... ...... ......+....
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP 238 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence 4567899999998764 468899999999999999999987532211 000000 00000000000
Q ss_pred --------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 272 --------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 272 --------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.......+.++.+++.+||..||.+|||+.+++.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 01112345788999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=334.36 Aligned_cols=247 Identities=18% Similarity=0.200 Sum_probs=188.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCC------CCcccccceecC-Ceee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSE------RLVNLIGCCCEG-EERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~~-~~~~ 126 (488)
.|.+++.||+|+||+||+|.. .+++.||||+++... .....+..|+.+++.++|. +++++++++... ...+
T Consensus 130 ~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~ 208 (467)
T PTZ00284 130 RFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMC 208 (467)
T ss_pred cEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEE
Confidence 467888999999999999994 568889999996432 2234567788888877654 578888888654 5789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCC---------------
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDG--------------- 190 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~--------------- 190 (488)
+|||++ |++|.+++. ..+.+++..+..|+.||+.||.|||++ + ||||||||+|||++.++
T Consensus 209 iv~~~~-g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 209 IVMPKY-GPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred EEEecc-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 999998 688988886 346799999999999999999999984 8 99999999999998665
Q ss_pred -CCeeccCCCcccCCC-CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc------ccc
Q 011349 191 -NPRLSCFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG------KNF 262 (488)
Q Consensus 191 -~~kl~Dfgla~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~------~~~ 262 (488)
.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... ..+
T Consensus 285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~ 364 (467)
T PTZ00284 285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL 364 (467)
T ss_pred ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence 489999998865433 235678999999999999999999999999999999999999886532110000 000
Q ss_pred -------------ccccccc--cCCCC---------------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 -------------LMLMDSC--LEGHF---------------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 -------------~~~~~~~--~~~~~---------------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.... +.... .....+.+.+||.+||..||.+|||+.++++|
T Consensus 365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 365 PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 0000000 00000 00123567899999999999999999999997
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=292.99 Aligned_cols=248 Identities=21% Similarity=0.278 Sum_probs=198.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+-.+++.||+|+.|.|+++++ .+|...|||.+.... ....++++..++++...+ +|.||+.+|+|..+..+++.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 345678899999999999994 568999999997654 333456778888877774 89999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---c
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---S 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~ 208 (488)
|. --++.+++. -.+++++..+-++...++.||.||.++..|||||+||+|||+|+.|++||||||++.+..+.. .
T Consensus 173 Ms-~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtr 250 (391)
T KOG0983|consen 173 MS-TCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTR 250 (391)
T ss_pred HH-HHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccccccc
Confidence 94 455555543 456799999999999999999999987669999999999999999999999999998776543 4
Q ss_pred cccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
..|-+.|||||.+.- .+|+.++||||||++|+||.||..|+.+...+......+....++.++.. ...++.++++
T Consensus 251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~--~gFSp~F~~f 328 (391)
T KOG0983|consen 251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGH--MGFSPDFQSF 328 (391)
T ss_pred ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcc--cCcCHHHHHH
Confidence 467789999999853 46888999999999999999999998875433222111221112222211 2257889999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+..||.+|+.+||...++++|
T Consensus 329 v~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 329 VKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHhhcCcccCcchHHHhcC
Confidence 999999999999999999987
|
|
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=312.48 Aligned_cols=249 Identities=21% Similarity=0.276 Sum_probs=196.8
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.+++++.||+|+||.||+|... +++.||+|++...... ..+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 3567889999999999999964 5889999998654322 245688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+++++|..+.. ....+++.++..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 82 VDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred CCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 99999988765 3345899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh------ccccc----------ccccccc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR------GKNFL----------MLMDSCL 270 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~------~~~~~----------~~~~~~~ 270 (488)
...++..|+|||++.+ ..++.++|||||||++|||++|++|+......... ...+. .......
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 2356789999999875 45788999999999999999999877543210000 00000 0000000
Q ss_pred CC---------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 271 EG---------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 271 ~~---------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ...+..+..+.+++.+||..+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00 0112346789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=306.29 Aligned_cols=243 Identities=20% Similarity=0.250 Sum_probs=199.5
Q ss_pred cccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-----ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-----DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+.||+|+||.||+|... ++..|++|.+...... ..+.+.+|+.+++.++|+||+++++++..+...++|||
T Consensus 3 ~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 82 (258)
T cd06632 3 RKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLE 82 (258)
T ss_pred cccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEE
Confidence 45567899999999999955 7899999998654321 24578999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---C
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---K 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 207 (488)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... .
T Consensus 83 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~ 159 (258)
T cd06632 83 LVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAK 159 (258)
T ss_pred ecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceecccccccc
Confidence 9999999999863 456899999999999999999999999 999999999999999999999999998765433 2
Q ss_pred ccccccCCCCccccccCC-cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...++..|++||.+.... ++.++|+|||||++|+|++|+.|+........ .............+...++.+.+++
T Consensus 160 ~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li 235 (258)
T cd06632 160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA----VFKIGRSKELPPIPDHLSDEAKDFI 235 (258)
T ss_pred ccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH----HHHHHhcccCCCcCCCcCHHHHHHH
Confidence 445788999999987766 89999999999999999999988754321110 0001110111233445568899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||..+|.+||++.+++.+
T Consensus 236 ~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 236 LKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHHhhcCcccCcCHHHHhcC
Confidence 99999999999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=314.21 Aligned_cols=247 Identities=17% Similarity=0.129 Sum_probs=197.1
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+++.||+|+||.||++.. .+++.||||.+..... .....+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 356788899999999999995 4578899999876542 223468899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 205 (488)
|++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++....
T Consensus 82 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 82 YVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 9999999999963 456999999999999999999999999 99999999999999999999999999863210
Q ss_pred --------------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC
Q 011349 206 --------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 206 --------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
.....++..|+|||.+.+..++.++|||||||++|||++|..|+.+............... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~---~~ 235 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI---EW 235 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc---CC
Confidence 0123467789999999888899999999999999999999998865432221111111000 00
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.......+.++.+++.+||+.+|++||++.++.+.|
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 236 PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred CCccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 111123567899999999999999999854444443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=305.45 Aligned_cols=244 Identities=20% Similarity=0.293 Sum_probs=200.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+.+.||+|+||.||+|.. .+++.|++|.++..... ..+.+..|+.+++.++|+||+++++++...+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 56778899999999999994 47889999999866543 4567999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
++++|.+++. ....+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~ 158 (264)
T cd06626 82 SGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE 158 (264)
T ss_pred CCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence 9999999986 3456899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ---ccccccCCCCccccccCC---cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh--hhH
Q 011349 208 ---SYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN--DDG 279 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~---~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 279 (488)
...++..|+|||++.+.. .+.++||||||+++|++++|..||.............. .......+. ..+
T Consensus 159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 234 (264)
T cd06626 159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG----AGHKPPIPDSLQLS 234 (264)
T ss_pred cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHh----cCCCCCCCcccccC
Confidence 235678999999998766 88999999999999999999998754311110000000 011111222 236
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.+++.+||+.+|.+|||+.+++.+
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 788999999999999999999999865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=314.06 Aligned_cols=250 Identities=18% Similarity=0.245 Sum_probs=202.4
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..++.||+|+||.||+|.. .++..||+|++....... ...+.+|++++++++|||++++++++..+...++||||+
T Consensus 28 ~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 107 (317)
T cd06635 28 TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYC 107 (317)
T ss_pred hhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCC
Confidence 4567789999999999994 568899999987543222 346889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t 212 (488)
. |+|.+.+.. ...++++.++..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........++
T Consensus 108 ~-g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (317)
T cd06635 108 L-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGT 184 (317)
T ss_pred C-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccCC
Confidence 7 577777653 3456999999999999999999999999 999999999999999999999999998877666667789
Q ss_pred cCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 213 LAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 213 ~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+.|+|||++. ++.++.++|||||||++|||++|+.|+........ ...+.........+...++.+.+++.+|
T Consensus 185 ~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~ 260 (317)
T cd06635 185 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPTLQSNEWSDYFRNFVDSC 260 (317)
T ss_pred ccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH----HHHHHhccCCCCCCccccHHHHHHHHHH
Confidence 9999999974 45688999999999999999999988754321110 0111111111112234567899999999
Q ss_pred ccCCCCCCCCHHHHHHHhchhhcc
Q 011349 290 LQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
|+.+|.+||++.+++.++..+...
T Consensus 261 l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 261 LQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred ccCCcccCcCHHHHHhChhhhccC
Confidence 999999999999999987655443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=307.82 Aligned_cols=252 Identities=14% Similarity=0.145 Sum_probs=197.2
Q ss_pred HHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceec
Q 011349 44 DQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCE 121 (488)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 121 (488)
.++....++|...+.++ ||+|+||.||++. ..++..+|+|.+........ |+.....+ +||||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 7 SELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence 34444445554333333 5999999999999 45688899999875432221 22222223 69999999999999
Q ss_pred CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCc
Q 011349 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLM 200 (488)
Q Consensus 122 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla 200 (488)
++..++||||+++++|.+++.. ...+++.++..++.||+.||.|||+.+ ++||||||+||+++.++ .++|+|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 9999999999999999999963 347999999999999999999999999 99999999999999888 9999999999
Q ss_pred ccCCCCCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 201 KNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 201 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
+.........++..|+|||++.+..++.++|||||||++|||++|+.|+............+...... ....+...++
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 235 (267)
T PHA03390 158 KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK--KLPFIKNVSK 235 (267)
T ss_pred eecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc--cCCcccccCH
Confidence 87776666778999999999998889999999999999999999998876432221111111111111 1122335678
Q ss_pred HHHHHHHHhccCCCCCCCC-HHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPN-AKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps-~~~il~~ 306 (488)
.+.+++.+||+.+|.+||+ ++++++|
T Consensus 236 ~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 236 NANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred HHHHHHHHHhccChhhCCchHHHHhcC
Confidence 8999999999999999995 6999865
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=307.80 Aligned_cols=246 Identities=20% Similarity=0.281 Sum_probs=199.6
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
...+.||+|++|.||+|. ..+++.||+|.+...... ..+.+.+|+.++++++|+||+++++++.+++..++||
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~ 82 (268)
T cd06630 3 LKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFV 82 (268)
T ss_pred cccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEE
Confidence 455677999999999998 567899999998754321 1356889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~-- 206 (488)
||++|++|.+++. ...++++..+..++.||+.||.|||+.+ ++|+||||+||+++.++ .++|+|||++......
T Consensus 83 e~~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~ 159 (268)
T cd06630 83 EWMAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT 159 (268)
T ss_pred eccCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence 9999999999986 3457899999999999999999999999 99999999999998776 5999999998765432
Q ss_pred ------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 ------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....++..|+|||.+.+..++.++||||||+++++|++|..|+......... ...............+...++
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL-ALIFKIASATTAPSIPEHLSP 238 (268)
T ss_pred cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH-HHHHHHhccCCCCCCchhhCH
Confidence 1235678999999998888999999999999999999999887533211000 001111111122344555678
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+++.+||..+|.+||++.+++.+
T Consensus 239 ~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 239 GLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 89999999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=309.08 Aligned_cols=248 Identities=20% Similarity=0.278 Sum_probs=201.6
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+++.||.|++|.||++... +++.||+|.+..... .....+.+|++++++++||||+++++.+......++|+||++
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD 82 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence 456778899999999999954 688999999876542 234578999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYS 210 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~ 210 (488)
+++|.+++... ...+++..+..++.|++.||.|||+ .+ ++|+||||+||++++++.++|+|||.+...... ....
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (265)
T cd06605 83 GGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV 160 (265)
T ss_pred CCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhccc
Confidence 99999998642 2678999999999999999999999 88 999999999999999999999999998755322 1256
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-ccccccccccccCCCCChh-hHHHHHHHHHH
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-GKNFLMLMDSCLEGHFSND-DGTELVRLASR 288 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~ 288 (488)
++..|+|||.+.+..++.++||||||+++|+|++|+.|+......... .......... .....+.. .+.++.++|.+
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~ 239 (265)
T cd06605 161 GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPPRLPSGKFSPDFQDFVNL 239 (265)
T ss_pred CChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCCCCChhhcCHHHHHHHHH
Confidence 788999999999889999999999999999999999887543110000 0001111111 11122222 56789999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..+|.+|||+.+++.+
T Consensus 240 ~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 240 CLIKDPRERPSYKELLEH 257 (265)
T ss_pred HcCCCchhCcCHHHHhhC
Confidence 999999999999999876
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=309.08 Aligned_cols=242 Identities=17% Similarity=0.278 Sum_probs=200.5
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.++++||.|+||.||+|.. .++..||||.+..... .....+.+|+.++.+++||||+++++++..+...++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 35677889999999999984 5688999999865432 223578899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 209 (488)
+++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... ..
T Consensus 86 ~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06641 86 GGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence 999999884 456899999999999999999999999 9999999999999999999999999987654322 34
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.++..|+|||.+.+..++.++|||||||++|+|++|..|+........ ...+........+...+.++.+++.+|
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (277)
T cd06641 162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV-----LFLIPKNNPPTLEGNYSKPLKEFVEAC 236 (277)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH-----HHHHhcCCCCCCCcccCHHHHHHHHHH
Confidence 568889999999888899999999999999999999988754321111 011111112223345568899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|..+|.+||++.+++.+
T Consensus 237 l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 237 LNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCChhhCcCHHHHHhC
Confidence 99999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=310.46 Aligned_cols=248 Identities=21% Similarity=0.276 Sum_probs=198.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+.+.||.|+||.||+|.. .+|+.||||++..... .....+.+|+.++++++||||+++++++..+...++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 56788899999999999995 5689999999976542 22467999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
+++|.+++.. ....+++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 -~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 82 -PSDLSEVLRD-EERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred -CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 9999998864 3366999999999999999999999999 9999999999999999999999999988664432
Q ss_pred ccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc--------------------ccccc
Q 011349 208 SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------------------FLMLM 266 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--------------------~~~~~ 266 (488)
...++..|+|||.+.+. .++.++|||||||+++||+||.+++............ .....
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT 238 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence 34578899999998754 4688999999999999999997666443211000000 00000
Q ss_pred cccc----CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DSCL----EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... ........+..+.+++.+||..+|.+|||+++++.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 000112345789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=311.70 Aligned_cols=257 Identities=16% Similarity=0.172 Sum_probs=201.8
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccc
Q 011349 41 FNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGC 118 (488)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~ 118 (488)
+++.++..++++| .+++.||+|+||.||+|.. .+++.+|+|++.... .....+.+|+.+++++ +|||+++++++
T Consensus 12 ~~~~~~~~~~~~y---~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 12 LGLESLGDPTDTW---EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred hhcccCCCCCCCe---EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 4555666666665 6778889999999999994 568899999986543 2345788999999999 79999999999
Q ss_pred eecC-----CeeeEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 119 CCEG-----EERLLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 119 ~~~~-----~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
+... +..++||||++|++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTEGG 166 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCC
Confidence 8653 3589999999999999987531 3456899999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCC----CccccccCCCCccccccC-----CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc
Q 011349 192 PRLSCFGLMKNSRDG----KSYSTNLAFTPPEYLRTG-----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~-----~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 262 (488)
+||+|||++...... ....++..|+|||.+... .++.++|||||||++|||++|+.|+........ .
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~----~ 242 (291)
T cd06639 167 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT----L 242 (291)
T ss_pred EEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH----H
Confidence 999999998765432 234578899999998643 368899999999999999999988754321110 0
Q ss_pred cccccc-ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLMDS-CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... ......+...+..+.+++.+||+.+|++||++.+++.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 243 FKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 000000 00011122345679999999999999999999999986
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=305.83 Aligned_cols=245 Identities=18% Similarity=0.232 Sum_probs=202.1
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e 130 (488)
|++++.||.|+||.||++. ..++..||+|.++..... ..+.+..|+.++++++||||+++++++.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 5678889999999999998 456889999998754432 23468899999999999999999997754 456899999
Q ss_pred cCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 131 FMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCS-----SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 131 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
|+++++|.+++... ....+++..++.++.||+.||.||| +.+ ++|+||||+||++++++.+||+|||++...
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEecccccccc
Confidence 99999999998642 2467999999999999999999999 888 999999999999999999999999998876
Q ss_pred CCCC----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 204 RDGK----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 204 ~~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
.... ...+++.|+|||.+.+..++.++||||||+++++|++|..|+........ ...+........+...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 235 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQL-----ASKIKEGKFRRIPYRYS 235 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHH-----HHHHhcCCCCCCccccC
Confidence 5433 34678999999999988899999999999999999999988765422111 11111112223444567
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+.+++.+||..+|++||++.+|+++
T Consensus 236 ~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 236 SELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 889999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=293.95 Aligned_cols=242 Identities=19% Similarity=0.229 Sum_probs=205.4
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChH---HHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSR---QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...++.||+|+||.|.+++ ..+|+.+|+|++++...-..+ .-..|-++|+..+||.+..+--.|...+++|+||||
T Consensus 170 FdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMey 249 (516)
T KOG0690|consen 170 FDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEY 249 (516)
T ss_pred hhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEE
Confidence 3567889999999999999 678999999999877644433 346789999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC----CCC
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DGK 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~ 207 (488)
..||.|.-+|. ..+.+++.....+..+|+.||.|||+++ ||+||||.+|.|+|.+|++||+||||++... ...
T Consensus 250 anGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~k 326 (516)
T KOG0690|consen 250 ANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTK 326 (516)
T ss_pred ccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhcccccceec
Confidence 99999999887 4567999999999999999999999999 9999999999999999999999999998543 345
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
+++|||.|+|||++....|..+.|.|.+||++|||++|+.||+.......-.- ++-. .-.+|...+++...|+.
T Consensus 327 TFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeL----Il~e--d~kFPr~ls~eAktLLs 400 (516)
T KOG0690|consen 327 TFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFEL----ILME--DLKFPRTLSPEAKTLLS 400 (516)
T ss_pred cccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHH----HHhh--hccCCccCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999876533221111 1111 12466677889999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 011349 288 RCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rp-----s~~~il~~ 306 (488)
.+|.+||.+|. .+.+|.+|
T Consensus 401 GLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 401 GLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred HHhhcChHhhcCCCchhHHHHHhh
Confidence 99999999995 45566554
|
|
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=311.72 Aligned_cols=248 Identities=20% Similarity=0.251 Sum_probs=194.2
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
..++.||+|+||.||++.. .+++.||||.+...... ....+.+|+.++.++. |+||+++++++..+...+++|||+.
T Consensus 7 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~ 86 (288)
T cd06616 7 KDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD 86 (288)
T ss_pred HHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc
Confidence 3456789999999999994 56899999998754322 3457889999999996 9999999999998889999999996
Q ss_pred CCChhhhh---ccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 134 NETLSKHL---FHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 134 ~gsL~~~l---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
++|.++. .......+++..+..++.+++.||.|||+. + ++||||||+||+++.++.++|+|||+++.....
T Consensus 87 -~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 164 (288)
T cd06616 87 -ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK 164 (288)
T ss_pred -CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc
Confidence 5665543 222346799999999999999999999985 7 999999999999999999999999998754432
Q ss_pred CccccccCCCCccccccC---CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTG---RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~---~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....+++.|+|||.+.+. .++.++|||||||++|||++|+.||..................+......+...+.++.
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (288)
T cd06616 165 TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFV 244 (288)
T ss_pred ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHH
Confidence 234578899999999765 68899999999999999999998876432110000000000111111222234677899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+|+.+||+.+|++|||+.+|+.+
T Consensus 245 ~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 245 NFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=314.33 Aligned_cols=243 Identities=14% Similarity=0.213 Sum_probs=184.5
Q ss_pred ccCCCCCCceEEEEEeC---CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec--CCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~ 134 (488)
.+||+|+||.||+|... ++..||+|.+.... ....+.+|+.+++.++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 46899999999999854 35789999987543 23568899999999999999999998854 457899999996
Q ss_pred CChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee----cCCCCCeeccCCCcccC
Q 011349 135 ETLSKHLFHW-------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 135 gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~ 203 (488)
++|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 5777776421 2235889999999999999999999999 9999999999999 56679999999999865
Q ss_pred CCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc----------------
Q 011349 204 RDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG---------------- 259 (488)
Q Consensus 204 ~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~---------------- 259 (488)
... ....+|+.|+|||.+.+ ..++.++|||||||++|||+||++||.....+....
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 432 23467899999999876 457899999999999999999998875321110000
Q ss_pred ----cccc---------cccccccC------------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 ----KNFL---------MLMDSCLE------------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 ----~~~~---------~~~~~~~~------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+. ........ ..........+.+|+.+||..||.+|||+.++++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000 00000000 00011123568899999999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=306.71 Aligned_cols=247 Identities=15% Similarity=0.182 Sum_probs=197.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCC------ee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGE------ER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~------~~ 125 (488)
+.|.+++.||.|++|.||+|.. .+++.|++|++.... ...+.+.+|+.+++++ .|+||+++++++.... ..
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 3457888999999999999995 467889999987654 2356799999999999 6999999999986544 48
Q ss_pred eEEEecCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 126 LLVAEFMPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
++||||+++++|.+++.... +..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceec
Confidence 99999999999999886432 467999999999999999999999999 999999999999999999999999998754
Q ss_pred CCC----CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc-CCC
Q 011349 204 RDG----KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL-EGH 273 (488)
Q Consensus 204 ~~~----~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 273 (488)
... ....++..|+|||.+.. ..++.++|||||||++++|+||..|+........ ......... ...
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~ 239 (275)
T cd06608 164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA----LFKIPRNPPPTLK 239 (275)
T ss_pred ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH----HHHhhccCCCCCC
Confidence 332 23457889999998754 3467899999999999999999988754311111 011111111 111
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+...+..+.+++.+||..||++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 240 SPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 122356789999999999999999999999875
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=309.51 Aligned_cols=249 Identities=19% Similarity=0.254 Sum_probs=194.5
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+++.||.|++|.||+|... +++.||||.+...... ....+.+|++++++++|+||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 45678889999999999999954 6889999998754322 234577899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+. ++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... .
T Consensus 85 ~~-~~L~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (291)
T cd07844 85 LD-TDLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYS 161 (291)
T ss_pred CC-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCcccc
Confidence 97 599988864 2346899999999999999999999999 999999999999999999999999998754321 1
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhh--hhh----------cccccccc--------
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD--LIR----------GKNFLMLM-------- 266 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~--~~~----------~~~~~~~~-------- 266 (488)
...++..|+|||.+.+ ..++.++|||||||++|+|++|..||...... ... ...+....
T Consensus 162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07844 162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPY 241 (291)
T ss_pred ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccc
Confidence 2345788999999876 45788999999999999999999887543210 000 00000000
Q ss_pred ------ccccCCCCChhhH--HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 ------DSCLEGHFSNDDG--TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ------~~~~~~~~~~~~~--~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........ .... ..+.+++.+||..+|++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 242 SFPFYPPRPLINHA-PRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccCChhHHHhC-cCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000000 0112 678899999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=309.47 Aligned_cols=241 Identities=20% Similarity=0.261 Sum_probs=197.9
Q ss_pred cccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 59 VSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
.+.||+|++|.||++.. .+++.|++|++........+.+.+|+.+++.++||||+++++++..++..++|+||++|++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 45679999999999994 56889999998765544456789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNL 213 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~ 213 (488)
.+++.. ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....+++
T Consensus 104 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 179 (285)
T cd06648 104 TDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 179 (285)
T ss_pred HHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCc
Confidence 999853 56899999999999999999999999 999999999999999999999999987654332 2345788
Q ss_pred CCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 214 ~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
.|+|||.+.+..++.++|||||||++|||++|+.|+.......... .......... ..+...+..+.+++.+||..+
T Consensus 180 ~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~ 256 (285)
T cd06648 180 YWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK-RIRDNLPPKL--KNLHKVSPRLRSFLDRMLVRD 256 (285)
T ss_pred cccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH-HHHhcCCCCC--cccccCCHHHHHHHHHHcccC
Confidence 9999999998889999999999999999999998875432111100 0111111111 112235678999999999999
Q ss_pred CCCCCCHHHHHHH
Q 011349 294 PRERPNAKSLVAS 306 (488)
Q Consensus 294 p~~Rps~~~il~~ 306 (488)
|++|||+.+++++
T Consensus 257 p~~Rpt~~~il~~ 269 (285)
T cd06648 257 PAQRATAAELLNH 269 (285)
T ss_pred hhhCcCHHHHccC
Confidence 9999999999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-39 Score=305.62 Aligned_cols=242 Identities=19% Similarity=0.259 Sum_probs=198.2
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcC---CCCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLR---SERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e 130 (488)
|.+++.||.|+||.||+|.. .+++.||||.++... ......+.+|+.+++.++ |||++++++++..+...++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 45677889999999999994 578999999987543 233567889999999996 9999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++|++|.+++. ...+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 83 YAEGGSVRTLMK---AGPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred cCCCCcHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence 999999999885 347999999999999999999999999 9999999999999999999999999987654432
Q ss_pred -ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh-hhHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN-DDGTELVR 284 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ 284 (488)
...++..|+|||.+.+ ..++.++|||||||++|+|++|..|+.......... ..........+. ..+.++.+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 233 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-----LIPKSKPPRLEDNGYSKLLRE 233 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh-----ccccCCCCCCCcccCCHHHHH
Confidence 3467889999999875 446889999999999999999998875432211110 011111111222 25678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+||..||++||++.+++.+
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhC
Confidence 9999999999999999999985
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=308.37 Aligned_cols=249 Identities=20% Similarity=0.236 Sum_probs=196.4
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|++++.||.|++|.||+|.. .+|+.||||.+...... ....+.+|++++++++||||+++++++.+++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 46778889999999999995 46889999998754322 2357889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
. ++|..++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 6 68988886545567999999999999999999999999 999999999999999999999999998755432 22
Q ss_pred cccccCCCCccccccCC-cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc--------------------cccc
Q 011349 209 YSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL--------------------MLMD 267 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~-~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--------------------~~~~ 267 (488)
..+++.|+|||.+.+.. ++.++|||||||++|||+||+.||.............. ....
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 34578899999887644 58899999999999999999988765422110000000 0000
Q ss_pred cccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 SCLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 ~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..... ......+..+.+++.+||+.||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000 0111245678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=304.15 Aligned_cols=246 Identities=20% Similarity=0.275 Sum_probs=204.0
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++.+.||.|++|.||+|... +++.|+||++..... .....+.+|+..+.+++|+||+++++++......++||||++
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD 82 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence 467788999999999999955 599999999876653 235679999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
+++|.+++.. ...+++..++.++.|+++||.|||+ .+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 83 ~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 159 (264)
T cd06623 83 GGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT 159 (264)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCcccc
Confidence 9999999963 3679999999999999999999999 98 9999999999999999999999999988664432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh-hHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND-DGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 287 (488)
..++..|+|||.+.+..++.++||||||+++|+|+||..|+........ ......+.. ......+.. .+..+.+++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~ 237 (264)
T cd06623 160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF-FELMQAICD-GPPPSLPAEEFSPEFRDFIS 237 (264)
T ss_pred eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCH-HHHHHHHhc-CCCCCCCcccCCHHHHHHHH
Confidence 4567899999999988899999999999999999999988755421000 000011111 111222333 5788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..+|++||++.+++++
T Consensus 238 ~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 238 ACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHccCChhhCCCHHHHHhC
Confidence 9999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=307.62 Aligned_cols=247 Identities=19% Similarity=0.262 Sum_probs=193.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHH-HhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARA-VGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
++.+++.||+|+||.||+|.. .+|+.||||+++.... .....+..|+.+ ++.++||||+++++++..++..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 356788899999999999995 4699999999876532 223456667765 5566899999999999999999999999
Q ss_pred CCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 132 MPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
++ |+|.+++... ....+++..++.++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 97 7888777542 335799999999999999999999997 7 9999999999999999999999999988654322
Q ss_pred --ccccccCCCCcccccc----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 --SYSTNLAFTPPEYLRT----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...++..|+|||.+.+ ..++.++|+|||||++|+|++|+.|+........ ..................+.+
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ---QLKQVVEEPSPQLPAEKFSPE 236 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH---HHHHHHhcCCCCCCccccCHH
Confidence 2457889999998865 4468899999999999999999988753211100 011111111111111234678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+++.+||..+|.+||++.+++.+
T Consensus 237 l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 237 FQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-39 Score=307.19 Aligned_cols=251 Identities=18% Similarity=0.220 Sum_probs=198.9
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~ 131 (488)
+.++++||.|++|.||+|.. .+++.||+|.+..... .....+.+|++++++++||||+++++++... ..+++||||
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 82 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY 82 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence 46678889999999999995 4688899999875432 2345799999999999999999999988653 468999999
Q ss_pred CCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--C
Q 011349 132 MPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~ 207 (488)
++|++|.+++.. .....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... .
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (287)
T cd06621 83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG 161 (287)
T ss_pred cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeeccccccccccccc
Confidence 999999987653 13456899999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc----ccccCCCCC--hhhHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM----DSCLEGHFS--NDDGTE 281 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~ 281 (488)
...++..|+|||.+.+..++.++|||||||++|+|++|..|+................+ ......... ...++.
T Consensus 162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (287)
T cd06621 162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEE 241 (287)
T ss_pred cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHH
Confidence 34568899999999988999999999999999999999988764411000000000000 001111111 234678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+++.+||..+|++|||+.+++.+-
T Consensus 242 ~~~li~~~l~~~p~~Rpt~~eil~~~ 267 (287)
T cd06621 242 FKDFIKQCLEKDPTRRPTPWDMLEHP 267 (287)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHhCc
Confidence 99999999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=304.97 Aligned_cols=248 Identities=17% Similarity=0.247 Sum_probs=198.5
Q ss_pred ccccccCCCCCCceEEEEEeCC--CcEEEEEEccCCCC----------CChHHHHHHHHHHhh-cCCCCCcccccceecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDE--DRWIAVKRFNRSAW----------PDSRQFLEEARAVGL-LRSERLVNLIGCCCEG 122 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~ 122 (488)
|.+.+.||+|+||.||+|.... ++.+|||.+..... ....++.+|+.++.+ ++||||+++++++..+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 4567788999999999999644 78899998864321 123457788888875 6999999999999999
Q ss_pred CeeeEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCC
Q 011349 123 EERLLVAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
+..++||||++|++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||||+||++++++.++|+|||+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccc
Confidence 999999999999999988743 134568999999999999999999996 56 99999999999999999999999999
Q ss_pred cccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 200 MKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 200 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
+...... ....++..|++||.+.+..++.++||||||+++|+|++|+.|+.......... ........+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~ 236 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLAT----KIVEAVYEPLPEG 236 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHH----HHhhccCCcCCcc
Confidence 9865543 24467889999999998889999999999999999999998875432211111 1111111111112
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
..++.+.+++.+||+.||++||++.++.++++
T Consensus 237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 237 MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 34678999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=307.66 Aligned_cols=246 Identities=18% Similarity=0.237 Sum_probs=201.4
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+...+|+|++|.||+|... ++..|++|++..... ..+.+.+|+++++.++|+||+++++++......++|+||++
T Consensus 20 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 98 (286)
T cd06614 20 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMD 98 (286)
T ss_pred cchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccC
Confidence 3456677899999999999965 688899999976543 45678999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
|++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 99 ~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 176 (286)
T cd06614 99 GGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSV 176 (286)
T ss_pred CCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccc
Confidence 999999997422 37999999999999999999999999 999999999999999999999999987654432 233
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.++..|++||.+.+..++.++|||||||++|+|++|..|+.............. ........+...+..+.+++.+|
T Consensus 177 ~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~ 253 (286)
T cd06614 177 VGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT---KGIPPLKNPEKWSPEFKDFLNKC 253 (286)
T ss_pred cCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cCCCCCcchhhCCHHHHHHHHHH
Confidence 567899999999888899999999999999999999988754321111000000 00001111223567899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|+.+|.+||++.+++.+
T Consensus 254 l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 254 LVKDPEKRPSAEELLQH 270 (286)
T ss_pred hccChhhCcCHHHHhhC
Confidence 99999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=305.15 Aligned_cols=248 Identities=20% Similarity=0.269 Sum_probs=194.7
Q ss_pred cccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCC------e
Q 011349 57 NIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGE------E 124 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 124 (488)
.+.+.||+|+||.||+|.+. ++..||||++..... ...+.+.+|+++++.++||||+++++++.... .
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 45677899999999999843 367899999875432 23457889999999999999999999886532 2
Q ss_pred eeEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 125 RLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
.++++||+.+|+|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECccccc
Confidence 47899999999998877421 1235889999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCC
Q 011349 201 KNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 201 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
+...... ...+++.|++||.+.+..++.++|||||||++|||++ |.+|+.......... .+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~ 235 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYN-----YLIKGNRLK 235 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHH-----HHHcCCcCC
Confidence 8654322 2234568999999988889999999999999999999 666654332111100 000001112
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.+...+..+.+++.+||+.+|++|||+.+++..|+.+
T Consensus 236 ~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 236 QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2234567899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=345.74 Aligned_cols=241 Identities=18% Similarity=0.236 Sum_probs=200.4
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 59 VSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
...||.|.||.||.|. .++|...|+|-++... ......+.+|+.++..+.|||+|+++|+=.+.+..+|.||||+||
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 3456999999999999 7789999999886433 233457889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--------
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-------- 207 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------- 207 (488)
+|.+++. .++..++.....+..|++.|+.|||++| ||||||||+||+++.+|.+|++|||.|..+....
T Consensus 1320 sLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~ 1396 (1509)
T KOG4645|consen 1320 SLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQ 1396 (1509)
T ss_pred cHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHH
Confidence 9999997 3455778888889999999999999999 9999999999999999999999999998765432
Q ss_pred ccccccCCCCccccccCC---cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~---~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...||+.|||||++.+.. -..+.||||||||++||+||+.||....... .+.--+.....+.+|...+.+-.+
T Consensus 1397 ~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~----aIMy~V~~gh~Pq~P~~ls~~g~d 1472 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW----AIMYHVAAGHKPQIPERLSSEGRD 1472 (1509)
T ss_pred hhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh----HHHhHHhccCCCCCchhhhHhHHH
Confidence 467899999999998733 4568999999999999999999875321110 011111112234566668899999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+||..||..|+++.+++++
T Consensus 1473 Fle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1473 FLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred HHHHHHhcCchhhhHHHHHHHh
Confidence 9999999999999999999987
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=302.81 Aligned_cols=240 Identities=18% Similarity=0.214 Sum_probs=198.3
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||.|++|.||+|.. .+++.||+|++...... ..+.+.+|+.+++.++||||+++++.+.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 59999999999995 45889999999754422 245789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---CccccccC
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLA 214 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~ 214 (488)
.+++. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILR--DRGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 99996 3456899999999999999999999999 999999999999999999999999999876543 23457889
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|++||.+.+..++.++|+||||+++|+|++|..|+.....+.. ..............++...+..+.+++.+||..+|
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 235 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM--EIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNP 235 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH--HHHHHHhccCCCCCCCcccCHHHHHHHHHHccCCh
Confidence 9999999888899999999999999999999988765431100 00111111112233444457889999999999999
Q ss_pred CCCCC-----HHHHHHH
Q 011349 295 RERPN-----AKSLVAS 306 (488)
Q Consensus 295 ~~Rps-----~~~il~~ 306 (488)
++||+ +.+++++
T Consensus 236 ~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 236 EERLGNLKGGIKDIKKH 252 (262)
T ss_pred hhCcCCcccCHHHHhcC
Confidence 99999 8888875
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=308.58 Aligned_cols=249 Identities=22% Similarity=0.297 Sum_probs=198.4
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.+++++.||+|+||.||+|... +++.||||+++.... .....+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 3577888999999999999954 688999999875432 2346789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
++++.+..++. ....+++.++..++.||+.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 82 VERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 99877766554 3456899999999999999999999999 9999999999999999999999999988655432
Q ss_pred -ccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhh--hc------------------cccc--
Q 011349 208 -SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--RG------------------KNFL-- 263 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~--~~------------------~~~~-- 263 (488)
...++..|+|||++.+. .++.++||||||+++|+|++|.+|+........ .. ....
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 34567889999999887 789999999999999999999987764311100 00 0000
Q ss_pred ccccc----ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 MLMDS----CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+. .....++...+.++.+++.+||..+|++|||+++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 00011222347889999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=301.67 Aligned_cols=245 Identities=16% Similarity=0.243 Sum_probs=200.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.+.+.||+|+||.||+|.. .+|..||+|.+..... ...+.+.+|+.+++.++|+||+++++.+......++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 35677889999999999994 4688899999875432 23457889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCCCC----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~~---- 207 (488)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++ .++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence 9999999987544456899999999999999999999999 99999999999999876 46999999987664432
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...+++.|+|||++.+..++.++||||||++++||++|..|+.......... ...... ........+..+.+++.
T Consensus 161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~i~ 235 (257)
T cd08225 161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVL----KICQGY-FAPISPNFSRDLRSLIS 235 (257)
T ss_pred ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH----HHhccc-CCCCCCCCCHHHHHHHH
Confidence 2357889999999988889999999999999999999998876432211111 111111 11223345678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..+|++|||+.+++.+
T Consensus 236 ~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 236 QLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHhccChhhCcCHHHHhhC
Confidence 9999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=308.65 Aligned_cols=250 Identities=19% Similarity=0.216 Sum_probs=197.1
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 128 (488)
..+.+++.||.|+||.||+|... +++.||||.++...... ...+.+|+.++.+++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 45677888999999999999954 68899999997544222 33577899999999999999999998877 789999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~-~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 85 MEYVE-HDLKSLMET-MKQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred ehhcC-cCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 99997 599888864 2346999999999999999999999999 999999999999999999999999998865443
Q ss_pred --CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc------------------------
Q 011349 207 --KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG------------------------ 259 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~------------------------ 259 (488)
....+++.|+|||.+.+. .++.++||||||+++|+|++|.+|+..........
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAK 241 (293)
T ss_pred ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhc
Confidence 233467889999998764 46889999999999999999998875432110000
Q ss_pred -cccccccccccCCCCChh-hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 -KNFLMLMDSCLEGHFSND-DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 -~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..........+...++.. .++.+.+++.+||+.+|++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred ccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000011111223322 46778999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-39 Score=309.07 Aligned_cols=248 Identities=21% Similarity=0.197 Sum_probs=195.6
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-----ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-----DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+++.||.|+||.||+|.. .+++.||||.+...... ....+..|++++++++|+||+++++++.+.+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 45677889999999999995 46899999999765433 2345778999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||+ +++|.+++.... ..+++..+..++.||++||.|||+++ ++|+||||+||+++.++.++|+|||+++......
T Consensus 82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 999 899999996422 37999999999999999999999999 9999999999999999999999999998664432
Q ss_pred --ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------------cccccc
Q 011349 208 --SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------------FLMLMD 267 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------------~~~~~~ 267 (488)
...+++.|+|||.+.+ ..++.++|||||||++|||++|.+++............ ......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence 2345778999999865 45788999999999999999997665432210000000 000000
Q ss_pred cccCC-----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 SCLEG-----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 ~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..... ......+..+.+++.+||..+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000 1112346789999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=302.39 Aligned_cols=242 Identities=17% Similarity=0.160 Sum_probs=191.8
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHH-hhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAV-GLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+.||.|+||.||+|.. .+++.||||.+....... ...+..|..++ ...+|+|++++++++..++..++||||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4679999999999994 568899999987543221 22345555544 444899999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccccC
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 214 (488)
++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||+++.........++..
T Consensus 82 ~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence 99999986 3456899999999999999999999999 99999999999999999999999999887665556678899
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|++||.+.+..++.++||||||+++|+|+||..|+................. .........+++.+.+++.+||..+|
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p 236 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRI--NWPEEVKEFCSPEAVDLINRLLCMDP 236 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--CCCCcccccCCHHHHHHHHHHccCCH
Confidence 9999999888889999999999999999999988765422211110000000 01112223457889999999999999
Q ss_pred CCCCCHH---HHHHH
Q 011349 295 RERPNAK---SLVAS 306 (488)
Q Consensus 295 ~~Rps~~---~il~~ 306 (488)
++||++. +++.|
T Consensus 237 ~~R~~~~~~~~~l~~ 251 (260)
T cd05611 237 AKRLGANGYQEIKSH 251 (260)
T ss_pred HHccCCCcHHHHHcC
Confidence 9999665 55444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-39 Score=305.20 Aligned_cols=239 Identities=18% Similarity=0.186 Sum_probs=189.4
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhh---cCCCCCcccccceecCCeeeEEEecCCC
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGL---LRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~---l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
||+|+||.||++.. .+++.||||.+....... ...+.+|..+++. .+||||+.+++++..++..++||||++|
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG 81 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence 69999999999995 568999999987543221 2234455544444 3699999999999988999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cccccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~~t 212 (488)
++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.++|+|||++...... ....++
T Consensus 82 ~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (279)
T cd05633 82 GDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (279)
T ss_pred CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence 99999886 3456999999999999999999999999 999999999999999999999999998754332 234678
Q ss_pred cCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
..|+|||.+.+ ..++.++|||||||++|+|++|..||......... ...... .......+...+.++.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMT-LTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HHHHHh-hcCCcCCccccCHHHHHHHHHHhc
Confidence 99999999864 56889999999999999999999988643211110 000000 011223344567889999999999
Q ss_pred CCCCCCC-----CHHHHHHH
Q 011349 292 YEPRERP-----NAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rp-----s~~~il~~ 306 (488)
.||.+|| |++++++|
T Consensus 236 ~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 236 RDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CCHHHhcCCCCCCHHHHHhC
Confidence 9999999 69999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-39 Score=304.92 Aligned_cols=242 Identities=18% Similarity=0.226 Sum_probs=195.2
Q ss_pred CCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||+|+||+||++. ..+|+.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 5999999999998 45689999999865321 2244678899999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---CccccccC
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLA 214 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~ 214 (488)
.+++.......+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 99987544457999999999999999999999999 999999999999999999999999998765432 23456789
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|+|||.+.+..++.++|||||||++++|++|+.||......... ..+..... ......+...++.+.+++.+||+.+|
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p 237 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK-EELKRRTL-EMAVEYPDKFSPEAKDLCEALLQKDP 237 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH-HHHHhccc-cccccCCccCCHHHHHHHHHHccCCh
Confidence 99999998888999999999999999999999887543211000 00000000 01122334457889999999999999
Q ss_pred CCCC-----CHHHHHHH
Q 011349 295 RERP-----NAKSLVAS 306 (488)
Q Consensus 295 ~~Rp-----s~~~il~~ 306 (488)
.+|| ++.+++.|
T Consensus 238 ~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 238 EKRLGCRGGSADEVREH 254 (277)
T ss_pred hHccCCCcccHHHHHhC
Confidence 9999 77777765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=291.37 Aligned_cols=252 Identities=15% Similarity=0.212 Sum_probs=197.1
Q ss_pred cccccccCCCCCCceEEEEE-eCC----CcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceec-CCeee
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDE----DRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCE-GEERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~----~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~ 126 (488)
.|++++.||+|+||.||+|+ .++ ...+|||+|+.... .-.....+|+.+++.++||||+.+..+|.. +..++
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 46789999999999999996 222 23689999986532 235678999999999999999999999987 77899
Q ss_pred EEEecCCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC----CCCeeccCCC
Q 011349 127 LVAEFMPNETLSKHLFHW---ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD----GNPRLSCFGL 199 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfgl 199 (488)
+++||.+ -+|..+|+.. ....++...+..|++||+.|+.|||++- |+||||||+|||+..+ |.|||+|||+
T Consensus 105 l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 105 LLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred EEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeecccH
Confidence 9999998 6898888743 2357999999999999999999999999 9999999999999766 9999999999
Q ss_pred cccCCCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc--------cc
Q 011349 200 MKNSRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------FL 263 (488)
Q Consensus 200 a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--------~~ 263 (488)
++...+. .....|..|.|||.+.| ..||++.|||+.|||+.||+|-.+.|.+.....-.... +.
T Consensus 183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf 262 (438)
T KOG0666|consen 183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIF 262 (438)
T ss_pred HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHH
Confidence 9976542 34566899999999988 56999999999999999999999877654222111100 00
Q ss_pred cccc---------------------cccCCCCCh-----------hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 264 MLMD---------------------SCLEGHFSN-----------DDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 264 ~~~~---------------------~~~~~~~~~-----------~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+++. ......+.. .-++...+|+.++|..||-+|.|+++.+++.-
T Consensus 263 ~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y 339 (438)
T KOG0666|consen 263 EVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY 339 (438)
T ss_pred HHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence 0000 000000000 01234789999999999999999999999854
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=305.34 Aligned_cols=240 Identities=20% Similarity=0.267 Sum_probs=196.8
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChh
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 138 (488)
..||+|+||.||++.. .+++.||||++..........+.+|+.+++.++|+||+++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 4579999999999985 578999999987554444567899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----CccccccC
Q 011349 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNLA 214 (488)
Q Consensus 139 ~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~ 214 (488)
+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....+++.
T Consensus 106 ~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06657 106 DIVT---HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY 181 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCcc
Confidence 9874 446899999999999999999999999 999999999999999999999999988655332 23457889
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|++||.+.+..++.++||||||+++|+|++|..|+.......... ........... .....+..+.+++.+||..+|
T Consensus 182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~P 258 (292)
T cd06657 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPKLK--NLHKVSPSLKGFLDRLLVRDP 258 (292)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhhCCcccC--CcccCCHHHHHHHHHHHhCCc
Confidence 999999988888999999999999999999998875432111100 00111111110 112346778999999999999
Q ss_pred CCCCCHHHHHHH
Q 011349 295 RERPNAKSLVAS 306 (488)
Q Consensus 295 ~~Rps~~~il~~ 306 (488)
.+||++.+++.+
T Consensus 259 ~~R~~~~~ll~~ 270 (292)
T cd06657 259 AQRATAAELLKH 270 (292)
T ss_pred ccCcCHHHHhcC
Confidence 999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=305.73 Aligned_cols=249 Identities=18% Similarity=0.197 Sum_probs=193.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.+++.||+|+||.||+|.. .++..||||++....... ...+.+|+.+++.++|+||+++++++..+...++||||+
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYM 85 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEecc
Confidence 457888999999999999984 568899999987554222 346789999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
. ++|.+.+.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..... ..
T Consensus 86 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 162 (291)
T cd07870 86 H-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSS 162 (291)
T ss_pred c-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCC
Confidence 6 677776643 2356888999999999999999999999 999999999999999999999999998754322 23
Q ss_pred cccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc------------------ccccccccc
Q 011349 209 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------------------NFLMLMDSC 269 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------------------~~~~~~~~~ 269 (488)
..+++.|+|||.+.+. .++.++|||||||++|||+||..||........... .........
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07870 163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW 242 (291)
T ss_pred ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchh
Confidence 3568899999998763 578899999999999999999988754321100000 000000000
Q ss_pred cCCCCC---------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 270 LEGHFS---------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 270 ~~~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+ ...+..+.+++.+|+..||.+|||+.+++.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 243 FLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred ccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000 0124678899999999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=303.42 Aligned_cols=248 Identities=20% Similarity=0.236 Sum_probs=195.7
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+++.||.|++|.||+|.. .+|..||||++...... ....+.+|+++++.++|||++++++++.+++..++||||++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~ 81 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD 81 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence 5677889999999999994 57999999998754322 23568899999999999999999999999999999999995
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
++|.+++.......+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ...
T Consensus 82 -~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 159 (283)
T cd07835 82 -LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHE 159 (283)
T ss_pred -cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcc
Confidence 79999886433346999999999999999999999998 999999999999999999999999998754322 223
Q ss_pred ccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc--------------------cccccccc
Q 011349 210 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------------------NFLMLMDS 268 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------------------~~~~~~~~ 268 (488)
.++..|+|||++.+. .++.++||||||+++|+|++|+.||........... ........
T Consensus 160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07835 160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK 239 (283)
T ss_pred ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence 457889999988664 568899999999999999999988754321100000 00000000
Q ss_pred c---cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 C---LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ~---~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. .........+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 240 WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 0011122345788999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=296.97 Aligned_cols=246 Identities=21% Similarity=0.243 Sum_probs=203.2
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
|.+.+.||+|++|.||++... ++..|++|++..........+.+|+.+++.++|+||+++++++......++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 456678899999999999964 6889999999876544567899999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Ccccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYST 211 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~ 211 (488)
++|.+++... ...+++..+..++.|++.||.+||+.+ ++|+||+|+||++++++.++|+|||.+...... ....+
T Consensus 82 ~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 159 (253)
T cd05122 82 GSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG 159 (253)
T ss_pred CcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeeccccccccccccccceec
Confidence 9999998642 257999999999999999999999998 999999999999999999999999998876554 35567
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
+..|++||.+.+..++.++||||||+++++|++|+.|+.................. ....+...+..+.+++.+||.
T Consensus 160 ~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~ 236 (253)
T cd05122 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPP---GLRNPEKWSDEFKDFLKKCLQ 236 (253)
T ss_pred CCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCC---CcCcccccCHHHHHHHHHHcc
Confidence 88999999998888999999999999999999999887544111110000000000 001111236789999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 011349 292 YEPRERPNAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rps~~~il~~ 306 (488)
.||++|||+.+++.+
T Consensus 237 ~~p~~R~t~~~~l~~ 251 (253)
T cd05122 237 KNPEKRPTAEQLLKH 251 (253)
T ss_pred CChhhCCCHHHHhcC
Confidence 999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=306.89 Aligned_cols=245 Identities=19% Similarity=0.212 Sum_probs=197.9
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..++.||+|+||.||+|.. .++..||||.+...... ....+.+|+++++.++|+|++++++++......++||||+
T Consensus 18 ~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 97 (308)
T cd06634 18 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC 97 (308)
T ss_pred HHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEcc
Confidence 4456789999999999994 46888999998643222 2346889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t 212 (488)
. |+|.+.+.. ....+++.++..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++..........++
T Consensus 98 ~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (308)
T cd06634 98 L-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGT 174 (308)
T ss_pred C-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccccCC
Confidence 7 688777643 3456899999999999999999999999 999999999999999999999999999877666667788
Q ss_pred cCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 213 LAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 213 ~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+.|+|||.+. ...++.++|||||||++|+|++|..|+.......... ...............+..+.+++.+|
T Consensus 175 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~c 250 (308)
T cd06634 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----HIAQNESPALQSGHWSEYFRNFVDSC 250 (308)
T ss_pred ccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH----HHhhcCCCCcCcccccHHHHHHHHHH
Confidence 9999999975 3567889999999999999999998875432111100 01111111111234567899999999
Q ss_pred ccCCCCCCCCHHHHHHHhc
Q 011349 290 LQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l~ 308 (488)
|..+|.+||++.+++.+..
T Consensus 251 l~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 251 LQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred hhCCcccCCCHHHHhhCcc
Confidence 9999999999999998844
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=305.49 Aligned_cols=256 Identities=19% Similarity=0.221 Sum_probs=209.6
Q ss_pred HHHHHh-cCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccce
Q 011349 45 QLRAAT-SGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCC 119 (488)
Q Consensus 45 ~~~~~~-~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~ 119 (488)
|..-.| +.|..++++ |+|+||.||-+. ..+|+.+|.|++.+... .......+|-.+|.+++.+.||.+--.|
T Consensus 178 E~qpvt~n~F~~~Rvl---GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf 254 (591)
T KOG0986|consen 178 ELQPVTKNTFRVYRVL---GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF 254 (591)
T ss_pred HhhhccccceeeeEEE---ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee
Confidence 444444 346666665 999999999998 56799999999864432 2234578999999999999999999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
.+.+.+++|+..|.||+|.-+|.+..+..|++..+..++.+|+.||.+||+.+ ||+|||||+|||+|++|+++|+|.||
T Consensus 255 eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGL 333 (591)
T KOG0986|consen 255 ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGL 333 (591)
T ss_pred cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccce
Confidence 99999999999999999999998777778999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 200 MKNSRDGK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 200 a~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
|..+..+. ...||.+|||||++....|+.+.|.|||||+||||+.|+.||....... ..+.+...+- .....++.
T Consensus 334 Avei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv-k~eEvdrr~~-~~~~ey~~ 411 (591)
T KOG0986|consen 334 AVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV-KREEVDRRTL-EDPEEYSD 411 (591)
T ss_pred EEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh-hHHHHHHHHh-cchhhccc
Confidence 99877654 3478999999999999999999999999999999999999986542111 1111111100 01224566
Q ss_pred hhHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 011349 277 DDGTELVRLASRCLQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps-----~~~il~~ 306 (488)
..+++..+|....|.+||++|.. +.++.+|
T Consensus 412 kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 412 KFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred ccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 67889999999999999999964 4456555
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=311.13 Aligned_cols=248 Identities=19% Similarity=0.248 Sum_probs=212.5
Q ss_pred cCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+.+.-|.+++.||+|.|++|.+|. ..++..||||.+.+..... .+.+.+|+++|..++|||||+++.+......+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 445567899999999999999999 4568999999998776443 3568999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+.+|.+++++. ..+++.+..+..++.|+..|++|||+++ |+|||||++||||+.+.++||+|||++......
T Consensus 133 V~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~ 209 (596)
T KOG0586|consen 133 VMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYGL 209 (596)
T ss_pred EEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeecccc
Confidence 999999999999998 4566777999999999999999999999 999999999999999999999999999876543
Q ss_pred --CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC--CChhhHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FSNDDGTE 281 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 281 (488)
.+++|++.|.|||++.+.++ ++.+|+||+|++||-|+.|..||.+....... ++.+.+. ++...+.+
T Consensus 210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr--------~rvl~gk~rIp~~ms~d 281 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELR--------PRVLRGKYRIPFYMSCD 281 (596)
T ss_pred cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccccc--------chheeeeecccceeech
Confidence 47899999999999999776 67999999999999999999998765333222 2222221 23345677
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
..+++.++|.++|.+|++++++.++-..
T Consensus 282 ce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 282 CEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred hHHHHHHhhccCccccCCHHHhhhhccc
Confidence 8999999999999999999999998543
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=309.48 Aligned_cols=246 Identities=18% Similarity=0.219 Sum_probs=191.1
Q ss_pred cCCCC--CCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCC
Q 011349 61 EHGEK--APNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 61 ~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.||.| +||+||++.. .+|+.||||++...... ..+.+.+|+.+++.++||||++++++|..++..++||||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 34555 9999999995 57999999998754322 2357889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---------
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--------- 206 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--------- 206 (488)
+|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++++||+.+......
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD 163 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence 9999987544456899999999999999999999999 999999999999999999999999854322111
Q ss_pred --CccccccCCCCccccccC--CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc-------------------
Q 011349 207 --KSYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL------------------- 263 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~--~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~------------------- 263 (488)
....++..|+|||++.+. .++.++|||||||++|||++|+.|+..............
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (328)
T cd08226 164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRM 243 (328)
T ss_pred ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhh
Confidence 011235679999999763 478899999999999999999988764321110000000
Q ss_pred ----------------------cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 264 ----------------------MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 264 ----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
...........+...+..+.+|+.+||..||++|||+.+++++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~ 309 (328)
T cd08226 244 KNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA 309 (328)
T ss_pred ccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence 00000111122234567899999999999999999999999873
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=287.20 Aligned_cols=249 Identities=17% Similarity=0.158 Sum_probs=200.5
Q ss_pred HhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceec----C
Q 011349 49 ATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCE----G 122 (488)
Q Consensus 49 ~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~ 122 (488)
.|.+|+-.. ++||-|-.|.|-.+. ..+|+.+|+|++. +.....+|+++--.. .|||||++++++.. .
T Consensus 59 itedY~is~--qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 59 ITEDYSISW--QVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred chhhheehh--hhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 444444332 568999999999998 5579999999985 345678899887777 59999999999864 3
Q ss_pred CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec---CCCCCeeccCCC
Q 011349 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGL 199 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgl 199 (488)
..+.+|||.|+||.|...|..+..+.+++.++..|+.||+.|+.|||+.+ |.||||||+|+|.. .+..+||+|||+
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEeccccc
Confidence 46789999999999999999877888999999999999999999999999 99999999999996 456789999999
Q ss_pred cccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC-
Q 011349 200 MKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS- 275 (488)
Q Consensus 200 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 275 (488)
|+..... .+.+-|+.|.|||++...+|+..+|+||+||++|-|++|-+||+..-...+..+-...+..... .||
T Consensus 211 AK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy--~FP~ 288 (400)
T KOG0604|consen 211 AKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQY--EFPE 288 (400)
T ss_pred ccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCc--cCCC
Confidence 9976533 3567799999999999999999999999999999999999998764221111111111111111 122
Q ss_pred ---hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 276 ---NDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 276 ---~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
..++....++|+.+|..+|.+|.|+.++++|-
T Consensus 289 pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp 323 (400)
T KOG0604|consen 289 PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP 323 (400)
T ss_pred hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence 24578889999999999999999999999873
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=306.60 Aligned_cols=242 Identities=20% Similarity=0.236 Sum_probs=195.8
Q ss_pred ccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 58 IVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+++||+|+||.||+|.. .++..|++|++....... ...+.+|+++++.++|||++++++++.+....++||||+.
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 104 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL 104 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence 356689999999999994 568899999987543222 3468899999999999999999999999999999999996
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcccccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 213 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~ 213 (488)
++|.+++.. ...++++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++..........++.
T Consensus 105 -~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~ 181 (313)
T cd06633 105 -GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTP 181 (313)
T ss_pred -CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccc
Confidence 677777753 3456999999999999999999999999 9999999999999999999999999987766556677889
Q ss_pred CCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 214 AFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 214 ~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
.|+|||++. ...++.++|||||||++|+|++|..|+............ .............+..+.+++.+||
T Consensus 182 ~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l 257 (313)
T cd06633 182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----AQNDSPTLQSNEWTDSFRGFVDYCL 257 (313)
T ss_pred cccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH----HhcCCCCCCccccCHHHHHHHHHHc
Confidence 999999984 356888999999999999999999887553211110000 0000111112234567999999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 011349 291 QYEPRERPNAKSLVAS 306 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~ 306 (488)
+.+|.+||++.+++.+
T Consensus 258 ~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 258 QKIPQERPASAELLRH 273 (313)
T ss_pred cCChhhCcCHHHHhcC
Confidence 9999999999999976
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=299.37 Aligned_cols=243 Identities=19% Similarity=0.221 Sum_probs=197.8
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC-----CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA-----WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
+.+.+.||+|+||.||+|. ..++..||+|.+.... ......+.+|+.++++++|+||+++++++.+. ...++
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence 4677888999999999999 4568999999875321 12234788999999999999999999988664 46889
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+++++|.+++. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.....
T Consensus 84 v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 84 FVEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EEEeCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 999999999999986 3456899999999999999999999999 999999999999999999999999998764321
Q ss_pred ------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 ------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....++..|+|||.+.+..++.++|||||||++++|++|+.||....... ..............+...++
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~p~~~~~ 236 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA----AIFKIATQPTKPMLPDGVSD 236 (264)
T ss_pred ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH----HHHHHHcCCCCCCCCcccCH
Confidence 13457889999999998889999999999999999999998875431111 11112222223345566778
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+++.+||. +|..||++.+++.|
T Consensus 237 ~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 237 ACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred HHHHHHHHHhc-CcccCccHHHHhcC
Confidence 89999999998 57999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=328.55 Aligned_cols=251 Identities=17% Similarity=0.204 Sum_probs=184.7
Q ss_pred CcccccccCCCCCCceEEEEEeCC--CcEEEEEEcc--------------C---CCCCChHHHHHHHHHHhhcCCCCCcc
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE--DRWIAVKRFN--------------R---SAWPDSRQFLEEARAVGLLRSERLVN 114 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~--------------~---~~~~~~~~~~~E~~~l~~l~h~niv~ 114 (488)
..|.++++||+|+||.||++..+. +..+++|.+. . ........+.+|+.+|++++|||||+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 457899999999999999987432 2222222111 0 01112346889999999999999999
Q ss_pred cccceecCCeeeEEEecCCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 115 LIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 115 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
+++++...+..|+|++++. ++|.+++.... .......++..|+.||+.||.|||+++ ||||||||+|||++.++.
T Consensus 228 l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 228 IEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCDGK 305 (501)
T ss_pred EeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCC
Confidence 9999999999999999995 67777764311 122345678889999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC-----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh-----hhhc--
Q 011349 192 PRLSCFGLMKNSRDGK-----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-----LIRG-- 259 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~-----~~~~-- 259 (488)
+||+|||+++...... ...||+.|+|||++.+..++.++|||||||++|||++|..+|...... ....
T Consensus 306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~ 385 (501)
T PHA03210 306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIID 385 (501)
T ss_pred EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHH
Confidence 9999999998654322 356899999999999999999999999999999999998655432110 0000
Q ss_pred ------ccc-------ccccccc----cCCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 ------KNF-------LMLMDSC----LEGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 ------~~~-------~~~~~~~----~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+ ...+... ....+ ....+..+.+++.+||..||.+|||+.+++.+
T Consensus 386 ~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 386 SLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred hcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000 0000000 00000 01134567888999999999999999999987
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=296.49 Aligned_cols=243 Identities=21% Similarity=0.308 Sum_probs=203.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.+.+.||+|++|.||++.. .+++.|+||.+..... .....+.+|++++++++|+|++++++++......++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 45678899999999999985 4688899999987654 23467999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (254)
T cd06627 82 ENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS 158 (254)
T ss_pred CCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCcccccc
Confidence 99999999863 367999999999999999999999999 9999999999999999999999999998765433 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..++..|+|||...+..++.++||||||+++++|++|..|+......... .... .......+...+..+.+++.+
T Consensus 159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~i~~ 233 (254)
T cd06627 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL----FRIV-QDDHPPLPEGISPELKDFLMQ 233 (254)
T ss_pred cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH----HHHh-ccCCCCCCCCCCHHHHHHHHH
Confidence 45788999999998877899999999999999999999887543211100 0000 111223444567889999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..+|++|||+.+++.+
T Consensus 234 ~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 234 CFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHhCChhhCcCHHHHhcC
Confidence 999999999999999864
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=303.90 Aligned_cols=251 Identities=12% Similarity=0.043 Sum_probs=184.5
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCCCh-----------HHHHHHHHHHhhcCCCCCcccccc
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWPDS-----------RQFLEEARAVGLLRSERLVNLIGC 118 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~~~~ 118 (488)
..+.+.+.||+|+||.||+|...+ +..+|+|+......... .....+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 357888999999999999999543 45567776543321110 112234445666789999999997
Q ss_pred eecCC----eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCee
Q 011349 119 CCEGE----ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194 (488)
Q Consensus 119 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 194 (488)
+.... ..++++|++. .++.+.+.. ....++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEE
Confidence 76543 3478888874 577766642 234688899999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC-----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhh-hhcccc
Q 011349 195 SCFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-IRGKNF 262 (488)
Q Consensus 195 ~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~-~~~~~~ 262 (488)
+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~ 247 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK 247 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence 999998754311 22468999999999999999999999999999999999998886542110 000000
Q ss_pred ccccccccCC-CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 263 LMLMDSCLEG-HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 263 ~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
...+.....+ .....+++.+.+++..||..+|++||++.++++.|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 248 CDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 0011111111 112244688999999999999999999999998763
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=301.21 Aligned_cols=247 Identities=21% Similarity=0.244 Sum_probs=192.1
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcC-CCCCcccccceecC--CeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLR-SERLVNLIGCCCEG--EERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e 130 (488)
|.++++||+|+||.||+|. ..+++.||+|+++.... .......+|+.++.++. |+||+++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 3567889999999999999 45688999999875432 22334567999999995 99999999999887 88999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---C
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---K 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 207 (488)
|++ ++|.+.+.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++. +.+||+|||+++..... .
T Consensus 81 ~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMD-MNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCC-ccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 997 588887754 2356899999999999999999999999 999999999999999 99999999999865433 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh-h------ccccc---cc------ccccc
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-R------GKNFL---ML------MDSCL 270 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~-~------~~~~~---~~------~~~~~ 270 (488)
...++..|+|||.+.+ +.++.++|||||||++|||++|..|++....... . ..... .. .....
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 3456889999997654 5578899999999999999999988865321110 0 00000 00 00000
Q ss_pred CC-------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 271 EG-------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 271 ~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ......+..+.+++.+||..+|++||++.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 0112346889999999999999999999999876
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=304.67 Aligned_cols=253 Identities=19% Similarity=0.213 Sum_probs=195.7
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecC--Ceee
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEG--EERL 126 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 126 (488)
+.+.+++++.||.|+||.||+|.. .+|+.||+|++....... ...+.+|+.++++++|+||+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 345678888999999999999995 568999999987543222 23567899999999999999999998654 4689
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+. ++|.+++.. ....+++.++..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++......
T Consensus 85 lv~e~~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCE-QDLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999997 588888764 2356999999999999999999999999 999999999999999999999999998866533
Q ss_pred C----ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------ccccccc-------
Q 011349 207 K----SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------NFLMLMD------- 267 (488)
Q Consensus 207 ~----~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-------~~~~~~~------- 267 (488)
. ...++..|+|||.+.+ ..++.++|||||||++|||++|.+|+........... .......
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07845 162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL 241 (309)
T ss_pred cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence 1 2234678999999876 4578999999999999999999988764322111000 0000000
Q ss_pred --cc-cC-CCC------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 268 --SC-LE-GHF------SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 268 --~~-~~-~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.. .. ... ....++.+.++|.+||..||++|||+.+++.|-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~ 291 (309)
T cd07845 242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS 291 (309)
T ss_pred cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 00 00 000 011357788999999999999999999999873
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=308.26 Aligned_cols=248 Identities=17% Similarity=0.254 Sum_probs=195.5
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC-----Ceee
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 126 (488)
.|.+++.||+|+||.||+|. ..+++.||||.+.... ......+.+|+.+++.++|+||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 35678889999999999999 4578999999987532 22345678899999999999999999988654 3479
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 86 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 86 IVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred EEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 9999996 78988886 4467999999999999999999999999 999999999999999999999999999866443
Q ss_pred ----CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhh----------------h---hcccc
Q 011349 207 ----KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL----------------I---RGKNF 262 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~----------------~---~~~~~ 262 (488)
....++..|+|||.+.+ ..++.++|||||||++|+|++|++||....... . .....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 23456889999998865 468899999999999999999998875432100 0 00000
Q ss_pred cccc---ccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLM---DSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~---~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+ ..... .......++++.+++.+||..+|++|||+.+++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000 00000 00112356788999999999999999999999998
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-38 Score=310.00 Aligned_cols=246 Identities=15% Similarity=0.216 Sum_probs=194.0
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC------Cee
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~ 125 (488)
.|.+++.||+|+||.||+|. ..+++.||||++.... ......+.+|+.++++++||||+++++++... ...
T Consensus 17 ~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 96 (353)
T cd07850 17 RYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDV 96 (353)
T ss_pred ceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcE
Confidence 45778889999999999999 4578999999986432 22345678899999999999999999987643 357
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||+. ++|.+.+.. .++...+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 97 YLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred EEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 99999996 688887742 2899999999999999999999999 99999999999999999999999999986544
Q ss_pred CC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----------------------
Q 011349 206 GK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG----------------------- 259 (488)
Q Consensus 206 ~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~----------------------- 259 (488)
.. ...++..|+|||.+.+..++.++|||||||++|+|++|+.||..........
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
T cd07850 171 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRN 250 (353)
T ss_pred CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhH
Confidence 32 3456889999999999999999999999999999999998876432100000
Q ss_pred ----------cccccccccccC----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 ----------KNFLMLMDSCLE----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 ----------~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+......... ...+...+..+.+++.+||+.||++|||+.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 251 YVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000000 00122346678999999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=302.93 Aligned_cols=251 Identities=19% Similarity=0.178 Sum_probs=194.9
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
..+.+.+.||.|++|.||+|.. .+++.||||.+..... ...+.+.+|++++++++||||+++++++..+...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 3567888999999999999995 4688999999865432 223568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCcccCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~--- 206 (488)
|++ ++|.+++.......+++..+..++.||+.||.|||+++ ++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 996 68888876434445788899999999999999999999 999999999999985 567899999999754322
Q ss_pred -CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------ccccccc----------
Q 011349 207 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------NFLMLMD---------- 267 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-------~~~~~~~---------- 267 (488)
....+++.|+|||.+.+ ..++.++|||||||++|+|+||.+|+........... .....+.
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 23356789999999876 4578899999999999999999988754321100000 0000000
Q ss_pred --cccCC----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 --SCLEG----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 --~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.... ......+..+.+++.+||+.+|++||++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0112345778999999999999999999999986
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-38 Score=298.67 Aligned_cols=239 Identities=19% Similarity=0.192 Sum_probs=189.1
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHH---HHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 62 HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEAR---AVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 62 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~---~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
||+|+||.||+|.. .+++.||||.+....... ...+..|.. .++...||||+++++++...+..++||||++|
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g 81 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 81 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence 69999999999984 568899999987543221 122444443 34445799999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cccccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~~t 212 (488)
++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....|+
T Consensus 82 ~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (278)
T cd05606 82 GDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (278)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCC
Confidence 99999886 4457999999999999999999999999 999999999999999999999999998754332 245688
Q ss_pred cCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhcc
Q 011349 213 LAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291 (488)
Q Consensus 213 ~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 291 (488)
..|+|||.+.++ .++.++|||||||++|||++|+.||......... ...... .......+...+..+.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~--~~~~~~-~~~~~~~~~~~s~~~~~li~~~l~ 235 (278)
T cd05606 159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMT-LTMAVELPDSFSPELRSLLEGLLQ 235 (278)
T ss_pred cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH--HHHHHh-hccCCCCCCcCCHHHHHHHHHHhh
Confidence 999999999754 6899999999999999999999887643111000 000000 011223344457889999999999
Q ss_pred CCCCCCC-----CHHHHHHH
Q 011349 292 YEPRERP-----NAKSLVAS 306 (488)
Q Consensus 292 ~dp~~Rp-----s~~~il~~ 306 (488)
.+|.+|| ++.+++++
T Consensus 236 ~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 236 RDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred cCHHhccCCCCCCHHHHHhC
Confidence 9999999 99999876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=295.78 Aligned_cols=245 Identities=20% Similarity=0.244 Sum_probs=203.2
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 130 (488)
+.+.+.||+|++|.||+|... +++.|++|++..... ...+.+.+|+.++++++|+||+++++.+... ...++|||
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 345677899999999999955 688999999876543 2356789999999999999999999999888 88999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 158 (260)
T cd06606 82 YVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE 158 (260)
T ss_pred ecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEecccccccc
Confidence 9999999999874 337999999999999999999999999 9999999999999999999999999988665432
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...++..|++||.+.+...+.++||||||+++++|++|..|+........ ..............+...+..+.+
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T cd06606 159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA---ALYKIGSSGEPPEIPEHLSEEAKD 235 (260)
T ss_pred cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HHHhccccCCCcCCCcccCHHHHH
Confidence 34568899999999888899999999999999999999988765431110 001111111222344455788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+||..+|.+||++.+++.+
T Consensus 236 ~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 236 FLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHHhCcCChhhCCCHHHHhhC
Confidence 9999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-38 Score=295.00 Aligned_cols=245 Identities=20% Similarity=0.246 Sum_probs=205.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+.+.||.|+||.||++.. .++..|++|++..... .....+.+|+++++.++|+|++++++.+..+...++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 46778889999999999995 4688999999976543 34567899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 133 PNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 9999999987532 467999999999999999999999998 9999999999999999999999999987654432
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+++.|+|||.+.+..++.++||||||+++++|++|..|+............. .......+...+..+.+++
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i 235 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKIL-----KGQYPPIPSQYSSELRNLV 235 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHh-----cCCCCCCCCCCCHHHHHHH
Confidence 3457889999999988889999999999999999999998875542221111111 1112233445678899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||..+|++|||+.+++.+
T Consensus 236 ~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 236 SSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHcCCChhhCcCHHHHhcC
Confidence 99999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=298.56 Aligned_cols=236 Identities=22% Similarity=0.252 Sum_probs=192.6
Q ss_pred CCCCCCceEEEEEeC-CCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||.|+||.||++... +|+.|++|.+..... ...+.+.+|++++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999965 499999999976543 2345789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----------
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----------- 206 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----------- 206 (488)
.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999874 347999999999999999999999999 999999999999999999999999998754332
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh--hHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND--DGTELV 283 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 283 (488)
....++..|++||.+.+...+.++||||||+++|++++|..|+........... ...... ..+.. .+..+.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~ 231 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQN----ILNGKI--EWPEDVEVSDEAI 231 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HhcCCc--CCCccccCCHHHH
Confidence 123567889999999888899999999999999999999988754422211111 110011 11222 368899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||+.+|.+|||+..+.+.
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~~~~~ 254 (265)
T cd05579 232 DLISKLLVPDPEKRLGAKSIEEI 254 (265)
T ss_pred HHHHHHhcCCHhhcCCCccHHHH
Confidence 99999999999999999444433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-38 Score=295.56 Aligned_cols=245 Identities=18% Similarity=0.242 Sum_probs=203.4
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.+.+.||.|+||.||++. ..++..+|||.+...... ....+.+|+++++.++|+||+++++++......++||||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 4677889999999999998 456889999998764322 2456889999999999999999999999999999999999
Q ss_pred CCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cc
Q 011349 133 PNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 208 (488)
++++|.+++.+. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 999999988642 2356899999999999999999999999 999999999999999999999999998766443 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..+++.|++||.+.+..++.++|+||||+++|+|++|+.|+.......... .+........+...+.++.+++.+
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRY-----KVQRGKYPPIPPIYSQDLQNFIRS 235 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHhcCCCCCCchhhCHHHHHHHHH
Confidence 456889999999998889999999999999999999998876543221111 111112223344567889999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..+|++||++.+++.+
T Consensus 236 ~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 236 MLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HcCCCcccCCCHHHHhcC
Confidence 999999999999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=310.26 Aligned_cols=247 Identities=16% Similarity=0.230 Sum_probs=192.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecC-----CeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~l 127 (488)
.|.+++.||+|+||.||+|. ..+|+.||||+++.... .....+.+|+.++++++|+||+++++++... ...++
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEE
Confidence 45788889999999999998 45789999999874322 2345688899999999999999999986543 35799
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
|+||+. ++|.+.+. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 86 v~e~~~-~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 86 VQELME-TDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred Eehhcc-cCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 999996 68888773 457999999999999999999999999 9999999999999999999999999987654321
Q ss_pred -------ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh--------h---ccccccccc-
Q 011349 208 -------SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--------R---GKNFLMLMD- 267 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~--------~---~~~~~~~~~- 267 (488)
...+|..|+|||.+.+ ..++.++|||||||++|+|++|+.||........ . ......+..
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL 240 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence 2356889999998754 5688999999999999999999988754321100 0 000000000
Q ss_pred ----------cccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 ----------SCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 ----------~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... ..+..+.++.+++.+||+.+|++|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000 011235678999999999999999999999998
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=305.07 Aligned_cols=249 Identities=17% Similarity=0.221 Sum_probs=193.2
Q ss_pred ccccccCCCCCCceEEEEEeC---CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD---EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
|.+++.||+|+||.||+|... ++..||||.+.... ....+.+.+|+.++.+++||||+++++++... ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 467788999999999999953 57899999998643 23346788999999999999999999999887 78999
Q ss_pred EEecCCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC----CCCCeeccCCCc
Q 011349 128 VAEFMPNETLSKHLFHW---ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ----DGNPRLSCFGLM 200 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgla 200 (488)
||||++ ++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||++
T Consensus 82 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 82 LFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 999997 5677666421 2247899999999999999999999999 999999999999999 999999999998
Q ss_pred ccCCCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh--------------
Q 011349 201 KNSRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------------- 258 (488)
Q Consensus 201 ~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------------- 258 (488)
...... ....++..|+|||.+.+ ..++.++|||||||++++|++|.+|+.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 865332 23356788999998876 45789999999999999999999887543221100
Q ss_pred ---------------ccccccccccccCCCCC---------h--hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 259 ---------------GKNFLMLMDSCLEGHFS---------N--DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 259 ---------------~~~~~~~~~~~~~~~~~---------~--~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........+......++ . ..+..+.+++.+||+.||++|||+.+++.+
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00000000000001111 0 234578999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=301.06 Aligned_cols=248 Identities=23% Similarity=0.262 Sum_probs=195.5
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 130 (488)
|.+++.||.|+||.||+|... +++.||||++.... ......+.+|+.+++.++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 356788999999999999954 58899999998663 22345788999999999999999999999887 78999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
|++ ++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~~-~~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMD-HDLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred ccc-ccHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 997 589888864 2257999999999999999999999999 9999999999999999999999999988665432
Q ss_pred --ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------ccccc--------
Q 011349 208 --SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NFLML-------- 265 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----------~~~~~-------- 265 (488)
...++..|+|||.+.+ ..++.++||||||+++|||+||+.|+........... .+...
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 2345778999998765 4578999999999999999999988754322111000 00000
Q ss_pred ------cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 ------MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........+...++..+.+++.+||..+|.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000001111136788999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-38 Score=303.64 Aligned_cols=244 Identities=20% Similarity=0.217 Sum_probs=188.1
Q ss_pred CCCCCCceEEEEEeCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhh
Q 011349 62 HGEKAPNVVYKGLVDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139 (488)
Q Consensus 62 lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 139 (488)
+|.|+++.||++.. +++.||||+++... ....+.+.+|+.+++.++|+||+++++++...+..+++|||+++++|.+
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 88 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence 34444444444433 78999999997652 2335679999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----------Cc
Q 011349 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----------KS 208 (488)
Q Consensus 140 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----------~~ 208 (488)
++.......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||.+...... ..
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~ 167 (314)
T cd08216 89 LLKTHFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKS 167 (314)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeecccccccccccccccc
Confidence 997544556899999999999999999999999 999999999999999999999999988644321 12
Q ss_pred cccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc----cccccc---------------
Q 011349 209 YSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN----FLMLMD--------------- 267 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~----~~~~~~--------------- 267 (488)
..++..|+|||.+.+ ..++.++|||||||++|||++|..||............ ....+.
T Consensus 168 ~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (314)
T cd08216 168 SVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSR 247 (314)
T ss_pred ccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccc
Confidence 345678999999876 35788999999999999999999987643211100000 000000
Q ss_pred ---------cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 268 ---------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 268 ---------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
...........+.++.+++.+||..||++|||+.+++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 248 SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 0001112223456789999999999999999999999973
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-39 Score=327.92 Aligned_cols=253 Identities=20% Similarity=0.191 Sum_probs=209.0
Q ss_pred HHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccC---CCCCChHHHHHHHHHHhhcCCCCCcccccceecC
Q 011349 47 RAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNR---SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG 122 (488)
Q Consensus 47 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 122 (488)
....-+-+++.|++.||+|+||.|..++ ..+++.||+|++++ ....+..-|..|-.+|..-+.+-|++++-.|.++
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 3333344556899999999999999999 45689999999986 3334566799999999999999999999999999
Q ss_pred CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
.++|+||||++||+|-.++.+. .++|+..+..++..|+-||.-||+.| +|||||||+|||||..|++||+|||.+-.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~--~~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKF--DRLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred cceEEEEecccCchHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchhHHh
Confidence 9999999999999999999743 37999999999999999999999999 99999999999999999999999998876
Q ss_pred CCCC-----CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC
Q 011349 203 SRDG-----KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 203 ~~~~-----~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
+... ...+|||.|++||+++. +.|++.+|.||+||++|||+.|..||+....-..-+. +++..-.-
T Consensus 225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~K----Im~hk~~l 300 (1317)
T KOG0612|consen 225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGK----IMNHKESL 300 (1317)
T ss_pred cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHH----Hhchhhhc
Confidence 6533 25689999999999863 5689999999999999999999999987643322222 22221111
Q ss_pred CCC--hhhHHHHHHHHHHhccCCCCCCCC---HHHHHHHh
Q 011349 273 HFS--NDDGTELVRLASRCLQYEPRERPN---AKSLVASL 307 (488)
Q Consensus 273 ~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~l 307 (488)
.+| ..++.+..+||.+.+ .+|+.|.. ++++-.|.
T Consensus 301 ~FP~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 301 SFPDETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred CCCcccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCc
Confidence 233 347889999999988 47888987 99999884
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=302.83 Aligned_cols=249 Identities=18% Similarity=0.197 Sum_probs=192.2
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcC-CCCCcccccceecCCe-----ee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEE-----RL 126 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~-----~~ 126 (488)
+.+.+.||+|+||.||+|.. .+++.||||.+..... .....+.+|+.+++.++ ||||+++++++...+. .+
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence 46778889999999999995 4689999999875432 22457889999999995 6999999999877665 89
Q ss_pred EEEecCCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCccc
Q 011349 127 LVAEFMPNETLSKHLFHWE---NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKN 202 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~ 202 (488)
+||||+++ +|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||+++.
T Consensus 83 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 83 LVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeeccccee
Confidence 99999984 8888875422 346899999999999999999999999 999999999999998 88999999999875
Q ss_pred CCCC----CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------ccccc-
Q 011349 203 SRDG----KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NFLML- 265 (488)
Q Consensus 203 ~~~~----~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----------~~~~~- 265 (488)
.... ....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||........... .+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 4322 22345788999998865 4578999999999999999999988765321110000 00000
Q ss_pred --c-----cc---ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 --M-----DS---CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 --~-----~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. .. ..........+.++.++|.+||..+|.+||++.+++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 00 00000112356779999999999999999999999876
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=313.29 Aligned_cols=239 Identities=17% Similarity=0.220 Sum_probs=194.2
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEccCC----CCCChHHHHHHHHHHhhcCCCCCcccccceecCCe--eeEEEecCC
Q 011349 61 EHGEKAPNVVYKGLV-DEDRWIAVKRFNRS----AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE--RLLVAEFMP 133 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~~ 133 (488)
.||+|+|-+||+|.. .+|-.||.--++.. .....+.|..|+.+|+.|+|||||+++.+|.+..+ +.+|+|++.
T Consensus 47 vLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~T 126 (632)
T KOG0584|consen 47 VLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFT 126 (632)
T ss_pred hcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeeccc
Confidence 469999999999994 45777774433322 12335789999999999999999999999987655 889999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeec-CCCCCeeccCCCcccCCCC--Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG--KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~--~~~ 209 (488)
.|+|..+++ +.+.++...+..|++||++||.|||++. ||||||||-+||+|+ ..|.|||+|.|||...... .+.
T Consensus 127 SGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksv 204 (632)
T KOG0584|consen 127 SGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSV 204 (632)
T ss_pred CCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccccee
Confidence 999999998 4566899999999999999999999985 699999999999997 5689999999999876543 456
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.|||.|||||+.. ..|+...||||||++++||+|+..|+........- ...+.....+..+.....++++++|.+|
T Consensus 205 IGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQI---YKKV~SGiKP~sl~kV~dPevr~fIekC 280 (632)
T KOG0584|consen 205 IGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQI---YKKVTSGIKPAALSKVKDPEVREFIEKC 280 (632)
T ss_pred ccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHH---HHHHHcCCCHHHhhccCCHHHHHHHHHH
Confidence 8999999999997 78999999999999999999999987665332211 1222222222223333357899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|.. .++|||+.++|.+
T Consensus 281 l~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 281 LAT-KSERLSAKELLKD 296 (632)
T ss_pred hcC-chhccCHHHHhhC
Confidence 999 9999999999987
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=306.98 Aligned_cols=248 Identities=17% Similarity=0.264 Sum_probs=194.5
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceec----CCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 128 (488)
+.+.+.||.|+||.||+|. ..+|..||+|++.... ......+.+|+.+|++++||||+++++++.. ....++|
T Consensus 7 y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 86 (334)
T cd07855 7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVV 86 (334)
T ss_pred eeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEE
Confidence 4567788999999999999 4569999999987543 2234568889999999999999999998753 3468999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++......
T Consensus 87 ~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 87 MDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred Eehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 99996 68998886 3456999999999999999999999999 999999999999999999999999998765322
Q ss_pred ------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh-------hcc------------
Q 011349 207 ------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-------RGK------------ 260 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~-------~~~------------ 260 (488)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .+.
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 242 (334)
T cd07855 163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSD 242 (334)
T ss_pred CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchh
Confidence 12357889999999865 5688999999999999999999998865321100 000
Q ss_pred ccccccccc-cCCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 261 NFLMLMDSC-LEGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 261 ~~~~~~~~~-~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
......... .... .....+.++.+++.+||+.+|.+|||+.+++.+-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 243 RVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 000000000 0000 1123467899999999999999999999999873
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=344.80 Aligned_cols=245 Identities=23% Similarity=0.373 Sum_probs=196.5
Q ss_pred cccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 59 VSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
...||+|+||.||+|.. .++..||||++..... ....|++.+++++|||||+++++|.+.+..++||||+++|+|
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L 770 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNL 770 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcH
Confidence 34569999999999995 5789999999875432 223568899999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccccC
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCS---SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 214 (488)
.+++. .++|.++..|+.||+.||+||| +.+ |+||||||+||+++.++..++. ||............+|+.
T Consensus 771 ~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~ 843 (968)
T PLN00113 771 SEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSA 843 (968)
T ss_pred HHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCCcccccc
Confidence 99994 2899999999999999999999 456 9999999999999998888875 776655444445577899
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh----------hhhccccccccccccCC--CCChhhHHHH
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD----------LIRGKNFLMLMDSCLEG--HFSNDDGTEL 282 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~----------~~~~~~~~~~~~~~~~~--~~~~~~~~~l 282 (488)
|+|||++.+..++.++|||||||++|||+||+.|+...... ..........+++.... ..+.....++
T Consensus 844 y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (968)
T PLN00113 844 YVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEV 923 (968)
T ss_pred ccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHH
Confidence 99999999999999999999999999999999987432110 00111122223333322 2233455678
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.+++.+||+.+|++||||.++++.|+.+.+..
T Consensus 924 ~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 924 MNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 89999999999999999999999999886643
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=300.74 Aligned_cols=249 Identities=19% Similarity=0.240 Sum_probs=195.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.++++||.|++|.||+|.. .+|..||||+++..... ....+.+|+.++++++|+||+++++++...+..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 46778899999999999995 46889999999765432 34567889999999999999999999999999999999998
Q ss_pred CCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 134 NETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 134 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
++|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.++|+|||++...... ..
T Consensus 82 -~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 82 -KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred -ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 58888875422 346899999999999999999999999 999999999999999999999999998754322 23
Q ss_pred cccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-----------------cccccccc
Q 011349 209 YSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-----------------LMLMDSCL 270 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-----------------~~~~~~~~ 270 (488)
..++..|++||.+.+ ..++.++|||||||++|+|++|+.|+............. ........
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 456788999999866 456889999999999999999998875432211000000 00000000
Q ss_pred C------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 271 E------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 271 ~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. ....+..+..+.+++.+||+.||.+||++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 00112345778999999999999999999999865
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=296.59 Aligned_cols=248 Identities=17% Similarity=0.269 Sum_probs=195.3
Q ss_pred cccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCC
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.||.|++|+||+|... +++.|+||++..... .......+|+..+.+++ |+||+++++++..++..++||||+
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 80 (283)
T cd07830 2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM- 80 (283)
T ss_pred eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-
Confidence 56778999999999999954 588899999875432 22334567999999998 999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Cccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYS 210 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~ 210 (488)
+|+|.+++.......+++.++..++.|++.+|.|||+++ ++|+||+|+||++++++.++|+|||++...... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYV 159 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCC
Confidence 789999887544457899999999999999999999999 999999999999999999999999999866543 2345
Q ss_pred cccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc---------------------ccccccccc
Q 011349 211 TNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG---------------------KNFLMLMDS 268 (488)
Q Consensus 211 ~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~---------------------~~~~~~~~~ 268 (488)
++..|+|||.+.+ ..++.++||||||++++||++|++|++......... ......+..
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07830 160 STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQ 239 (283)
T ss_pred CcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccc
Confidence 6889999998854 557899999999999999999998875442111000 000000000
Q ss_pred ccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 CLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
... .......+..+.+++.+||+.+|++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 240 FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000 00111225779999999999999999999999875
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=299.19 Aligned_cols=243 Identities=21% Similarity=0.249 Sum_probs=201.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 129 (488)
.|.+.+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.++++++ ||||+++++++..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 457788899999999999994 4799999999876432 22356889999999998 999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
|++++++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~--~~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIR--KYGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999999999997 3457999999999999999999999999 9999999999999999999999999987544322
Q ss_pred ----------------------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccc
Q 011349 208 ----------------------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLML 265 (488)
Q Consensus 208 ----------------------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 265 (488)
...++..|+|||.+.+..++.++||||||++++++++|..|+........ +...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~ 234 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT----FQKI 234 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH----HHHH
Confidence 22457889999999888899999999999999999999988764421111 1111
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCH----HHHHHH
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA----KSLVAS 306 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~----~~il~~ 306 (488)
. .....++...++.+.+++.+||+.+|.+||++ ++++.|
T Consensus 235 ~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 235 L--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred H--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1 11123344557889999999999999999999 888765
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=306.09 Aligned_cols=247 Identities=20% Similarity=0.287 Sum_probs=198.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCC-----eeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE-----ERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~l 127 (488)
|.+.+.||.|+||.||+|.. .++..||||++.... ....+.+.+|+.+++.++|+||+++++++.... ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 46778899999999999995 458999999987643 234567999999999999999999999988765 7899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 82 v~e~~~-~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 82 VTELME-TDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157 (330)
T ss_pred Eecchh-hhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence 999997 68988886 3457999999999999999999999999 9999999999999999999999999988665432
Q ss_pred -------ccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------------------
Q 011349 208 -------SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------------------- 260 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------------------- 260 (488)
...++..|+|||.+.+. .++.++||||||+++|+|++|.+||...........
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 237 (330)
T cd07834 158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSE 237 (330)
T ss_pred cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcccc
Confidence 34568889999999887 789999999999999999999988865422110000
Q ss_pred ccccccc---ccc---CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 NFLMLMD---SCL---EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 ~~~~~~~---~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+. ... ........+..+.+++.+||+.+|.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000000 000 000112246789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=299.12 Aligned_cols=248 Identities=21% Similarity=0.270 Sum_probs=198.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|.+++.||.|++|.||+|.. .+++.+++|.+...... ....+.+|+.++++++|+||+++++++..+...++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 35677899999999999994 47889999998765432 3467889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----c
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----S 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 208 (488)
+ ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||.+....... .
T Consensus 81 ~-~~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 D-TDLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred C-CCHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 7 588888764 2357999999999999999999999999 9999999999999999999999999987665432 3
Q ss_pred cccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----------cccccccc---------
Q 011349 209 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----------KNFLMLMD--------- 267 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-----------~~~~~~~~--------- 267 (488)
..++..|+|||.+.+. .++.++||||||+++|+|+||+.||+......... ..+.....
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 4567889999999876 78999999999999999999998875432111000 00000000
Q ss_pred -c---ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 -S---CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 -~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. ..........+.++.+++.+||..||.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 00001122356789999999999999999999999875
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=295.98 Aligned_cols=248 Identities=21% Similarity=0.231 Sum_probs=193.8
Q ss_pred cccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC--hHHHHHHHHHHhhc---CCCCCcccccceecCCe-----e
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD--SRQFLEEARAVGLL---RSERLVNLIGCCCEGEE-----R 125 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~-----~ 125 (488)
.+++.||+|+||.||+|... +++.||||+++...... ...+.+|+.+++++ +|+||+++++++...+. .
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 81 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL 81 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence 56778899999999999965 48999999997543222 34567788877766 59999999999987776 9
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
+++|||+. ++|.+++.......+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 82 TLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYSF 159 (287)
T ss_pred EEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence 99999997 58988886544446999999999999999999999999 99999999999999999999999999877643
Q ss_pred CC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc------------------c
Q 011349 206 GK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL------------------M 264 (488)
Q Consensus 206 ~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~------------------~ 264 (488)
.. ...++..|+|||.+.+..++.++|||||||++|||++|.+|+.............. .
T Consensus 160 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (287)
T cd07838 160 EMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRS 239 (287)
T ss_pred CcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchh
Confidence 32 23467889999999988899999999999999999999877754322110000000 0
Q ss_pred ccccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 LMDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 ~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....... .......+..+.+++.+||..||.+||++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 240 SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000 11112345778899999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=299.20 Aligned_cols=249 Identities=20% Similarity=0.281 Sum_probs=194.9
Q ss_pred CCcccccccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 129 (488)
+..+.+.+.||+|+||.||+|.... ++.||||.++..... ....+.+|+.++.+.. ||||+++++++......++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 4456778899999999999999654 889999999764322 3346777888777775 999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
||+. ++|.+++.. ....+++..+..++.||+.||.|||+. + ++||||+|+||++++++.+||+|||++.......
T Consensus 94 e~~~-~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 94 ELMS-TCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred eccC-cCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 9995 677777654 235799999999999999999999984 7 9999999999999999999999999987654322
Q ss_pred --ccccccCCCCccccccCC----cccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc-CCCCChhhHH
Q 011349 208 --SYSTNLAFTPPEYLRTGR----VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL-EGHFSNDDGT 280 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~----~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 280 (488)
...++..|+|||.+.+.. ++.++||||||+++|+|++|+.||........ .......... ........+.
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 247 (296)
T cd06618 171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE---VLTKILQEEPPSLPPNEGFSP 247 (296)
T ss_pred ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH---HHHHHhcCCCCCCCCCCCCCH
Confidence 234678899999987653 78899999999999999999988754211100 0001111110 0011113467
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+++.+||..||.+||++.+++.+.
T Consensus 248 ~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 248 DFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 899999999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=304.96 Aligned_cols=246 Identities=21% Similarity=0.275 Sum_probs=191.4
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC--CCChHHHHHHHHHHhhc-CCCCCcccccceecC--CeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA--WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEG--EERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~--~~~~lv~ 129 (488)
+.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++++ +||||+++++++... ...++||
T Consensus 9 y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~ 88 (337)
T cd07852 9 YEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVF 88 (337)
T ss_pred HHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEe
Confidence 456678899999999999954 68889999885432 22345678899999999 999999999988653 3689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||++ ++|..++.. ..+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 89 e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 89 EYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred cccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 9997 699988853 37899999999999999999999999 9999999999999999999999999987654322
Q ss_pred -------ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------------------
Q 011349 208 -------SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------------------- 260 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------------------- 260 (488)
...++..|+|||.+.+ ..++.++||||||+++|+|+||+.||...........
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (337)
T cd07852 164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSP 243 (337)
T ss_pred ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhh
Confidence 2356889999998865 4578899999999999999999988754321110000
Q ss_pred cccccccccc------CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 NFLMLMDSCL------EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 ~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+.... ........+.++.+++.+||+.+|++|||+.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 244 FAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000000 001111246789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=285.83 Aligned_cols=247 Identities=19% Similarity=0.228 Sum_probs=193.4
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 59 VSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
++.||.|+||+|++.. .+.|+..|||+++.... .+..++..|.+...+- +.||||+++|.+..++..++.||+|+ -
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-I 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-h
Confidence 4578999999999998 55799999999987764 3356788888876666 69999999999999999999999996 7
Q ss_pred Chhhhhc---cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---Ccc
Q 011349 136 TLSKHLF---HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSY 209 (488)
Q Consensus 136 sL~~~l~---~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 209 (488)
||..+.+ ......+++.-.-+|..-...||.||-+.-+||||||||+|||++..|.+||||||++....+. +.-
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~d 227 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVD 227 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhc
Confidence 7766543 2355679999999999999999999998766999999999999999999999999998765443 233
Q ss_pred ccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc-CCCCChhhHHHHHHHH
Q 011349 210 STNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL-EGHFSNDDGTELVRLA 286 (488)
Q Consensus 210 ~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li 286 (488)
.|-..|||||.+.. ..|+-+|||||||++|+|+.||+.|+..+..-.-....+..--.+.+ ...-....+..+..+|
T Consensus 228 aGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fi 307 (361)
T KOG1006|consen 228 AGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFI 307 (361)
T ss_pred cCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHH
Confidence 56678999999854 44888999999999999999999887655321111110000000111 1111123567899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
..||.+|-..||.+.+++++
T Consensus 308 ntCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 308 NTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHhhcccccCcchhhhhcC
Confidence 99999999999999999875
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=299.16 Aligned_cols=246 Identities=19% Similarity=0.240 Sum_probs=196.2
Q ss_pred ccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC----CChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW----PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
+.+.+.||.|+||.||+|.. .+|..||+|+++.... ...+.+.+|+.+++++ +|+||+++++++..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 46778899999999999985 3688999999875331 2245688999999999 5999999999999888999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 99999999999999863 456899999999999999999999999 999999999999999999999999998765432
Q ss_pred C-----ccccccCCCCccccccC--CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 207 K-----SYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 207 ~-----~~~~t~~y~aPE~~~~~--~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
. ...++..|+|||.+.+. .++.++||||||+++|+|+||..|+......... ......+.. ....++...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~ 236 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ-AEISRRILK-SEPPYPQEMS 236 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH-HHHHHHhhc-cCCCCCccCC
Confidence 1 34578899999998753 4678999999999999999999887532110000 000000000 1122344567
Q ss_pred HHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rp-----s~~~il~~ 306 (488)
+.+.+++.+||..+|++|| ++.+++.+
T Consensus 237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 8899999999999999997 77888776
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=300.58 Aligned_cols=251 Identities=20% Similarity=0.245 Sum_probs=190.8
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCC------
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGE------ 123 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 123 (488)
.+.|.++++||+|+||.||+|.. .+++.||||++...... ....+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 34567889999999999999995 46889999998654322 2335678999999999999999999886543
Q ss_pred --eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 124 --ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 124 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
..++||||+. ++|.+.+.. ....+++.++..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 3599999996 688887753 3346899999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCCC--------ccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-------ccccccc
Q 011349 202 NSRDGK--------SYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------GKNFLML 265 (488)
Q Consensus 202 ~~~~~~--------~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------~~~~~~~ 265 (488)
...... ...++..|+|||.+.+. .++.++||||||+++|||+||.+|+......... .......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 653321 23457789999988764 4788999999999999999999877543211000 0000000
Q ss_pred ---------cc-----cccCCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 ---------MD-----SCLEGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ---------~~-----~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+ ....... +...+..+.+++.+||..||.+|||+.++++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00 0000000 00123567899999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=298.21 Aligned_cols=249 Identities=19% Similarity=0.243 Sum_probs=197.0
Q ss_pred ccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC----CChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW----PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
+.+.+.||+|++|.||++.. .+++.||||+++.... ...+.+.+|+.++.++ +||||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 46778899999999999883 3578899999875321 2235688999999999 5999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++.....
T Consensus 82 lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999886 3456899999999999999999999999 999999999999999999999999998764432
Q ss_pred C-----ccccccCCCCccccccCC--cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 207 K-----SYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 207 ~-----~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
. ...++..|++||.+.+.. .+.++||||||+++|||+||..|+................... ....+...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTMS 236 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCcccC
Confidence 2 235788999999987654 7889999999999999999998875321110000000011111 122334456
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
..+.+++.+||+.+|++|||+.++...|+.
T Consensus 237 ~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 237 AEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 789999999999999999998877666543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=304.28 Aligned_cols=264 Identities=15% Similarity=0.199 Sum_probs=199.4
Q ss_pred CHHHHHHHhc-CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCccccc
Q 011349 42 NLDQLRAATS-GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIG 117 (488)
Q Consensus 42 ~~~~~~~~~~-~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~ 117 (488)
+..|+..++. -...+.+.+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.+++.++||||+++++
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 81 (342)
T cd07879 2 YREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLD 81 (342)
T ss_pred chhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhh
Confidence 4445555541 223556788899999999999994 5689999999875321 12346889999999999999999999
Q ss_pred ceecCC------eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 118 CCCEGE------ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 118 ~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++.... ..++|+||+. .+|..++ +..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~~ 155 (342)
T cd07879 82 VFTSAVSGDEFQDFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDCE 155 (342)
T ss_pred eecccccCCCCceEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCC
Confidence 886542 4699999996 5777655 245899999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc---------
Q 011349 192 PRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------- 260 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------- 260 (488)
++|+|||+++..... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........
T Consensus 156 ~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd07879 156 LKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 235 (342)
T ss_pred EEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 999999998865433 23466889999999876 4688999999999999999999998865421100000
Q ss_pred ----------cccc---ccccccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH--hchhh
Q 011349 261 ----------NFLM---LMDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVAS--LTPLQ 311 (488)
Q Consensus 261 ----------~~~~---~~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--l~~~~ 311 (488)
.... .......... .+..+..+.+++.+||+.||.+||++.+++.| ++..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0000 0000000000 11245678999999999999999999999987 55443
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-38 Score=308.66 Aligned_cols=192 Identities=22% Similarity=0.276 Sum_probs=167.8
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCC------eeeEEEec
Q 011349 60 SEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE------ERLLVAEF 131 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~ 131 (488)
+.||+|+||.||+|+ ..+|+.||||.++... ....+..-+|+++|++++|+|||+++++=.+.. ...+||||
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy 98 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY 98 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence 456999999999999 6789999999998754 334667889999999999999999998755433 46899999
Q ss_pred CCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec--CCCC--CeeccCCCcccCCCC
Q 011349 132 MPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGN--PRLSCFGLMKNSRDG 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~--~~~~--~kl~Dfgla~~~~~~ 206 (488)
|.||||+..+.+.+ ...|++.+.+.++.+++.||.|||+++ |+||||||.||++- .+|+ .||+|||.|+...++
T Consensus 99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~ 177 (732)
T KOG4250|consen 99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN 177 (732)
T ss_pred cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccCCCC
Confidence 99999999997643 356999999999999999999999999 99999999999993 4443 699999999988876
Q ss_pred C---ccccccCCCCccccc-cCCcccCCceEeehHHHHHHhhCCCCCCcc
Q 011349 207 K---SYSTNLAFTPPEYLR-TGRVIPESVVYSFGTLLLDLLSGKHIPPSH 252 (488)
Q Consensus 207 ~---~~~~t~~y~aPE~~~-~~~~~~~sDv~slG~il~el~tg~~p~~~~ 252 (488)
. +..||..|.+||... .+.|+..+|.|||||++|+++||..||-..
T Consensus 178 s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 178 SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 5 668999999999998 488999999999999999999999998544
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=278.43 Aligned_cols=254 Identities=21% Similarity=0.218 Sum_probs=204.3
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccce
Q 011349 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCC 119 (488)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 119 (488)
++.++.+.|. +.||+|+|+.|-.++ ..+|..+|||++.+.......++.+|++++.+++ |+||++++++|
T Consensus 74 ~F~d~YkLt~--------e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF 145 (463)
T KOG0607|consen 74 KFEDMYKLTS--------ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF 145 (463)
T ss_pred hHHHHHHhHH--------HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence 4666666664 346999999999998 8899999999998876566778999999999995 99999999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeecc
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSC 196 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~D 196 (488)
.++..+|||||-|.||+|..+|. .+.-|++.++..+..+|+.||.|||.+| |.||||||+|||..... -+||||
T Consensus 146 Edd~~FYLVfEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 146 EDDTRFYLVFEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred cccceEEEEEecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeec
Confidence 99999999999999999999998 5667999999999999999999999999 99999999999996544 479999
Q ss_pred CCCcccCCCC-----------CccccccCCCCccccc---c--CCcccCCceEeehHHHHHHhhCCCCCCcchhhh--hh
Q 011349 197 FGLMKNSRDG-----------KSYSTNLAFTPPEYLR---T--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL--IR 258 (488)
Q Consensus 197 fgla~~~~~~-----------~~~~~t~~y~aPE~~~---~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~--~~ 258 (488)
|.|..-.... .+.+|+..|||||+.. + ..|+.++|.||||||||-|++|-+||.+..... +.
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd 302 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD 302 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence 9987643221 1456778899999863 2 458889999999999999999999997652211 11
Q ss_pred cccc-----ccccccccCC--CCCh----hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 259 GKNF-----LMLMDSCLEG--HFSN----DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 259 ~~~~-----~~~~~~~~~~--~~~~----~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.. ..++..+..+ ++|. .++.+..++++.+|..|+.+|.++.+++.|
T Consensus 303 rGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 303 RGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred CCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 1110 1111111111 2333 356788999999999999999999999885
|
|
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=304.27 Aligned_cols=260 Identities=17% Similarity=0.225 Sum_probs=200.6
Q ss_pred cccCHHHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCccc
Q 011349 39 REFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNL 115 (488)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~ 115 (488)
+.....++..++++| .+++.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~~~~~~~y---~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~ 81 (345)
T cd07877 5 RQELNKTIWEVPERY---QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 81 (345)
T ss_pred hhhHHHHHhhccCce---EEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccce
Confidence 444556666666665 677888999999999998 45789999999975431 224568899999999999999999
Q ss_pred ccceecC------CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 116 IGCCCEG------EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 116 ~~~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
++++... ...+++++++ |++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~ 156 (345)
T cd07877 82 LDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNED 156 (345)
T ss_pred eeeeeecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCC
Confidence 9987543 3468888887 789988874 346999999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC-ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------
Q 011349 190 GNPRLSCFGLMKNSRDGK-SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------- 260 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~-~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------- 260 (488)
+.+||+|||++....... ...++..|+|||.+.+ ..++.++|||||||++|||++|+.|++..........
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (345)
T cd07877 157 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 236 (345)
T ss_pred CCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999999988654432 3467889999999876 5688899999999999999999988764321110000
Q ss_pred c---c------------ccccccccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 N---F------------LMLMDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 ~---~------------~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. . ...+.......+ ....++.+.+++.+||..||.+||++.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 0 000000000000 11235678999999999999999999999988
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=258.30 Aligned_cols=248 Identities=21% Similarity=0.252 Sum_probs=197.8
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
|..+++||+|+||+||+|+ .++++.||+|+++.+... -.....+|+-+|+.+.|+|||+++++...+..+-+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 4556788999999999999 677999999999865422 2457899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Cc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 208 (488)
. .+|..+... -++.++...+..++.|+++||.|+|+++ +.|||+||.|.||+.+|.+||+|||+++-..-. +.
T Consensus 84 d-qdlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcysa 160 (292)
T KOG0662|consen 84 D-QDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160 (292)
T ss_pred h-HHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec
Confidence 6 788888765 4567999999999999999999999999 999999999999999999999999999865433 23
Q ss_pred cccccCCCCccccccC-CcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccc--------------cccccccCC
Q 011349 209 YSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFL--------------MLMDSCLEG 272 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~--------------~~~~~~~~~ 272 (488)
...|..|.+|.++.|. -|+.+.|+||-||++.|+.. |++.|++...+......+. .+.+-..-+
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp 240 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP 240 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence 3568999999999884 48899999999999999987 5555776544322211111 111111111
Q ss_pred CCCh---------hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 273 HFSN---------DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 273 ~~~~---------~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.++. .....-++++.+.+..+|..|.+++..+++
T Consensus 241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 2221 122345789999999999999999999876
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=304.82 Aligned_cols=248 Identities=17% Similarity=0.211 Sum_probs=192.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC----------
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG---------- 122 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---------- 122 (488)
+.+.+++.||.|+||.||+|. ..+|..||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 356788899999999999999 456899999999776655567789999999999999999999876543
Q ss_pred ----CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccC
Q 011349 123 ----EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCF 197 (488)
Q Consensus 123 ----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Df 197 (488)
...++||||++ ++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++ +++.++|+||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCc
Confidence 35789999997 68988874 356999999999999999999999999 99999999999997 4567899999
Q ss_pred CCcccCCCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc---------
Q 011349 198 GLMKNSRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------- 260 (488)
Q Consensus 198 gla~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------- 260 (488)
|+++..... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 998754321 12246788999998754 5678899999999999999999998864321100000
Q ss_pred -----ccccccc-----cccCC-----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 -----NFLMLMD-----SCLEG-----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 -----~~~~~~~-----~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....... ..... ......+.++.+++.+||..||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000000 00000 0112345778999999999999999999999986
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=292.82 Aligned_cols=247 Identities=22% Similarity=0.264 Sum_probs=196.0
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.||+|++|.||+|+. .+++.||+|++.... ....+.+..|+.++++++|+||+++++++...+..++||||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD 81 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence 4567789999999999995 458999999998653 2234578899999999999999999999999999999999997
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----SY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 209 (488)
++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++...... ..
T Consensus 82 -~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 82 -MDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred -cCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 6999999642 246999999999999999999999999 9999999999999999999999999987654332 23
Q ss_pred ccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----------c------c---ccccccc
Q 011349 210 STNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----------K------N---FLMLMDS 268 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-----------~------~---~~~~~~~ 268 (488)
.++..|+|||.+.+. .++.++|||||||+++||++|.+|+.......... . . .......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 446789999998776 78999999999999999999988775542211000 0 0 0000000
Q ss_pred ccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 CLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... ...+..+..+.+++.+||..+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000 0111235789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=291.20 Aligned_cols=244 Identities=14% Similarity=0.168 Sum_probs=195.4
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC-----CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA-----WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
|.+.+.||+|+||.||++... .+..+++|.++... ......+..|+.+++.++||||+++++++.+....++||
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 567788999999999999853 34556666665322 122346778999999999999999999999999999999
Q ss_pred ecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 130 EFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||+++++|.+++.. .....+++..+..++.|++.||.|||+.+ ++|+||||+||++++ +.++|+|||++......
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 99999999988853 23457999999999999999999999999 999999999999975 56999999998765432
Q ss_pred ---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....+++.|+|||.+.+..++.++|+||||+++|+|++|..|+.......... ... .......+...+.++.
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~ 234 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVL----RIV-EGPTPSLPETYSRQLN 234 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH----HHH-cCCCCCCcchhcHHHH
Confidence 23457889999999988888999999999999999999998875432211111 111 1112223445678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||..+|++||++.+++.+
T Consensus 235 ~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 235 SIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHHHHhcCChhhCcCHHHHhhC
Confidence 99999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=301.64 Aligned_cols=251 Identities=19% Similarity=0.273 Sum_probs=195.9
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceec-CC
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCE-GE 123 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~ 123 (488)
..+++| .+++.||.|+||.||+|. ..++..||||++.... ....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 7 ~~~~~y---~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 7 EITNRY---VDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ccccce---EEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 345544 677888999999999998 4578999999886432 2234678899999999999999999998865 56
Q ss_pred eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
..++||||+ +++|.+++. ..++++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++...
T Consensus 84 ~~~lv~e~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQ 158 (328)
T ss_pred cEEEEeehh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCcccccccc
Confidence 789999999 578988884 456889999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh---------------h----cccc
Q 011349 204 RDG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI---------------R----GKNF 262 (488)
Q Consensus 204 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~---------------~----~~~~ 262 (488)
... ....++..|+|||.+.+ ..++.++|||||||++|+|+||+.||........ . ....
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd07856 159 DPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENT 238 (328)
T ss_pred CCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhh
Confidence 433 23456889999998866 5689999999999999999999988764321100 0 0000
Q ss_pred ccccccc-cCCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LMLMDSC-LEGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~~~~~~-~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+... ..... ....+..+.+++.+||+.+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 239 LRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 00011 12345789999999999999999999999887
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=297.20 Aligned_cols=247 Identities=23% Similarity=0.240 Sum_probs=191.6
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCC---------
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGE--------- 123 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------- 123 (488)
+.+.+.||.|+||.||+|... +|+.||||+++.... .....+.+|+.++++++||||+++++++....
T Consensus 9 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 88 (302)
T cd07864 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDK 88 (302)
T ss_pred hheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccC
Confidence 467788899999999999954 588999999975432 22356788999999999999999999887654
Q ss_pred -eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 124 -ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 124 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
..++|+||+++ +|...+.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||++++++.+||+|||++..
T Consensus 89 ~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~ 165 (302)
T cd07864 89 GAFYLVFEYMDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLARL 165 (302)
T ss_pred CcEEEEEcccCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCccccccc
Confidence 78999999985 77777753 2346999999999999999999999999 99999999999999999999999999886
Q ss_pred CCCCC-----ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-------ccccccccc--
Q 011349 203 SRDGK-----SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-------GKNFLMLMD-- 267 (488)
Q Consensus 203 ~~~~~-----~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-------~~~~~~~~~-- 267 (488)
..... ...++..|+|||.+.+ ..++.++|||||||+++||++|++|+......... .........
T Consensus 166 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (302)
T cd07864 166 YNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDV 245 (302)
T ss_pred ccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccc
Confidence 54332 1234778999998865 45788999999999999999999877543211000 000000000
Q ss_pred ----------------cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 ----------------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 ----------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... ......+..+.+++.+||..+|.+||++.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 246 IKLPYFNTMKPKKQYRRRLR-EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred cccccccccccccccccchh-hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 0111246789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=287.37 Aligned_cols=236 Identities=23% Similarity=0.252 Sum_probs=196.3
Q ss_pred CCCCCCceEEEEEeC-CCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 62 HGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 62 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
||.|+||.||++... +++.||+|.+...... ....+..|+.++++++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 599999999999954 5889999998765432 245789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccccccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNL 213 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~ 213 (488)
.+++. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++.
T Consensus 81 ~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLS--KEGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 99996 3446899999999999999999999999 999999999999999999999999998765442 2445788
Q ss_pred CCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 214 ~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
.|++||...+...+.++|+||||+++|++++|..|+......... ..... ....++...+..+.+++.+||..|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~----~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIY----EKILK--DPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHhc--CCCCCCCCCCHHHHHHHHHHhcCC
Confidence 999999998888899999999999999999999887544221111 11111 122344445788999999999999
Q ss_pred CCCCCCH---HHHHHH
Q 011349 294 PRERPNA---KSLVAS 306 (488)
Q Consensus 294 p~~Rps~---~~il~~ 306 (488)
|++||++ .+++.+
T Consensus 232 p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 232 PTKRLGSGGAEEIKAH 247 (250)
T ss_pred HhhCCCcccHHHHHhC
Confidence 9999999 666554
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=304.65 Aligned_cols=243 Identities=22% Similarity=0.241 Sum_probs=204.3
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+..|.+...+|.|+|+.|-.+. ..+++..+||++.... .+..+|+.++... +||||+++.+++.++.+.|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 35677888899999999999998 5678889999997663 3445778777766 6999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee-cCCCCCeeccCCCcccCCCC-C
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF-DQDGNPRLSCFGLMKNSRDG-K 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill-~~~~~~kl~Dfgla~~~~~~-~ 207 (488)
|++.|+-|.+.+.. ...+. ..+..|+.+|+.|+.|||++| ||||||||+|||+ ++.++++|+|||.++..... .
T Consensus 396 e~l~g~ell~ri~~--~~~~~-~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~ 471 (612)
T KOG0603|consen 396 ELLDGGELLRRIRS--KPEFC-SEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD 471 (612)
T ss_pred hhccccHHHHHHHh--cchhH-HHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence 99999988887752 23233 778889999999999999999 9999999999999 69999999999999887665 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
+.+-|..|.|||++....+++++|+||||++||+|++|+.|+.....+ .++......+.++..++....+|+.
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKdLl~ 544 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKDLLQ 544 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHHHHH
Confidence 446688999999999999999999999999999999999988655333 2333333444555677889999999
Q ss_pred HhccCCCCCCCCHHHHHHHhch
Q 011349 288 RCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~ 309 (488)
+||+.||.+||++.++..|-..
T Consensus 545 ~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 545 QLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HhccCChhhCcChhhhccCcch
Confidence 9999999999999999988443
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=301.65 Aligned_cols=244 Identities=19% Similarity=0.211 Sum_probs=190.9
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--------------hHHHHHHHHHHhhcCCCCCcccccceecCCe
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--------------SRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 124 (488)
+.||.|+||+||+|.. .+++.||||++....... ...+.+|+++++.++|+||+++++++..++.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 94 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF 94 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCc
Confidence 5589999999999994 468999999986543221 1247899999999999999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+. ++|.+++. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....
T Consensus 95 ~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 95 INLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLARRYG 170 (335)
T ss_pred EEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCccceeecc
Confidence 999999997 68999886 4456999999999999999999999999 9999999999999999999999999987554
Q ss_pred CC------------------CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc----
Q 011349 205 DG------------------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN---- 261 (488)
Q Consensus 205 ~~------------------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~---- 261 (488)
.. ....++..|+|||.+.+. .++.++|||||||++|||+||.+|+............
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~ 250 (335)
T PTZ00024 171 YPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELL 250 (335)
T ss_pred cccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 10 122357789999998764 4688999999999999999999887644221100000
Q ss_pred -------ccccc--------ccccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 262 -------FLMLM--------DSCLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 262 -------~~~~~--------~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+.... ...... ......+..+.+++.+||+.+|++|||+.+++.+-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 251 GTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred CCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 00000 000000 00112356789999999999999999999999863
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=296.62 Aligned_cols=250 Identities=20% Similarity=0.229 Sum_probs=190.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCC-------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGE------- 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 123 (488)
..+.+++.||.|+||.||+|.. .+++.||||++......+ ...+.+|+++++.++||||+++++++....
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence 4567888999999999999994 468899999986543222 346789999999999999999999875433
Q ss_pred -eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 124 -ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 124 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
..++||||+. ++|...+.. ....+++.++..++.||++||.|||+.+ ++|+||||+||++++++.++|+|||+++.
T Consensus 88 ~~~~lv~~~~~-~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 88 GSVYMVTPYMD-HDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred ceEEEEEecCC-cCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccchh
Confidence 4699999997 577776653 3457999999999999999999999999 99999999999999999999999999875
Q ss_pred CCCCC---------------ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc------
Q 011349 203 SRDGK---------------SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------ 260 (488)
Q Consensus 203 ~~~~~---------------~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------ 260 (488)
..... ...+++.|+|||.+.+ ..++.++|||||||++|||++|++|+.+.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~ 244 (311)
T cd07866 165 YDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCG 244 (311)
T ss_pred ccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 43221 1234678999998865 4578999999999999999999988754321110000
Q ss_pred -----------ccccccccccCCCCC-------hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 -----------NFLMLMDSCLEGHFS-------NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 -----------~~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..............+ ....+.+.+++.+||..+|.+|||+.+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred CCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 000000000000001 1123678899999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-37 Score=285.32 Aligned_cols=224 Identities=20% Similarity=0.238 Sum_probs=181.6
Q ss_pred CCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhhhhcc
Q 011349 65 KAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH 143 (488)
Q Consensus 65 G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 143 (488)
|.+|.||++. ..+++.||+|.+.... .+.+|...+....||||+++++++...+..++||||++||+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 8899999999 4578999999997543 234455555666799999999999999999999999999999999863
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-CccccccCCCCccccc
Q 011349 144 WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLR 222 (488)
Q Consensus 144 ~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~ 222 (488)
...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 446999999999999999999999999 999999999999999999999999987655433 2344567899999998
Q ss_pred cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCH--
Q 011349 223 TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA-- 300 (488)
Q Consensus 223 ~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~-- 300 (488)
+..++.++||||+|+++|||++|..|+....... ........+...++.+.+++.+||+.||++||++
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 8889999999999999999999997654321110 0001112334456789999999999999999986
Q ss_pred ---HHHHHH
Q 011349 301 ---KSLVAS 306 (488)
Q Consensus 301 ---~~il~~ 306 (488)
++++.|
T Consensus 226 ~~~~~~~~h 234 (237)
T cd05576 226 AGVEDIKSH 234 (237)
T ss_pred cchHHHHcC
Confidence 555543
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=301.00 Aligned_cols=247 Identities=16% Similarity=0.212 Sum_probs=194.2
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCC------ee
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGE------ER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~ 125 (488)
.|.+++.||+|+||.||+|. ..++..||||++...... ....+.+|+.+++.++||||+++++++.... ..
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07880 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDF 95 (343)
T ss_pred ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceE
Confidence 46788899999999999998 557999999998653322 2346889999999999999999999887543 35
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||+ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 96 ~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 96 YLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred EEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 8999999 789988874 456999999999999999999999999 99999999999999999999999999986644
Q ss_pred CC-ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------------------cccc
Q 011349 206 GK-SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-------------------NFLM 264 (488)
Q Consensus 206 ~~-~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-------------------~~~~ 264 (488)
.. ...+++.|+|||.+.+ ..++.++|||||||++|+|++|..||........... ....
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (343)
T cd07880 171 EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKN 250 (343)
T ss_pred CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHH
Confidence 32 3467889999999876 4578899999999999999999988764321100000 0000
Q ss_pred c---cccccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 L---MDSCLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 ~---~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. +...... ......++.+.+++.+|+..||.+|||+.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 251 YVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0000000 0112345678999999999999999999999976
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-38 Score=289.24 Aligned_cols=234 Identities=21% Similarity=0.282 Sum_probs=196.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+++..||+|+||.|.+|.. -+.+.+|||+++.+..-. .+--..|-++|.-. +-|.++++..+|.+-+.+|+|||
T Consensus 351 FnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVME 430 (683)
T KOG0696|consen 351 FNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVME 430 (683)
T ss_pred cceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEE
Confidence 46788899999999999984 457789999998765322 22234566777666 57889999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC----CC
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----DG 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~ 206 (488)
|+.||+|--+|. .-+.+.++.+..++.+|+-||-|||++| ||+||||.+|||+|.+|++||+|||+++... ..
T Consensus 431 yvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TT 507 (683)
T KOG0696|consen 431 YVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTT 507 (683)
T ss_pred EecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCCcce
Confidence 999999988886 4567999999999999999999999999 9999999999999999999999999998543 33
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
.+++|||.|+|||.+..++|+.+.|.|||||+||||+.|.+||.+...+.+- ..+.+. .-.+|...+.+...+.
T Consensus 508 kTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF----~aI~eh--nvsyPKslSkEAv~ic 581 (683)
T KOG0696|consen 508 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF----QAIMEH--NVSYPKSLSKEAVAIC 581 (683)
T ss_pred eeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHHc--cCcCcccccHHHHHHH
Confidence 5789999999999999999999999999999999999999999876443322 222221 1246777789999999
Q ss_pred HHhccCCCCCCC
Q 011349 287 SRCLQYEPRERP 298 (488)
Q Consensus 287 ~~cl~~dp~~Rp 298 (488)
...|.+.|.+|.
T Consensus 582 kg~ltK~P~kRL 593 (683)
T KOG0696|consen 582 KGLLTKHPGKRL 593 (683)
T ss_pred HHHhhcCCcccc
Confidence 999999999995
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=302.06 Aligned_cols=248 Identities=19% Similarity=0.240 Sum_probs=195.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCe------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE------ 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 124 (488)
+.|.+++.||+|++|.||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++...+.
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 4567888999999999999995 468899999987532 2234567889999999999999999998876554
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++|+||+ +++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.++|+|||++....
T Consensus 95 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 95 VYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred EEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 89999999 679999885 356999999999999999999999999 9999999999999999999999999988654
Q ss_pred CC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-------cccc----------
Q 011349 205 DG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-------FLML---------- 265 (488)
Q Consensus 205 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-------~~~~---------- 265 (488)
.. ....++..|+|||.+.+ ..++.++|||||||++|+|+||+.||+........... ....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07851 170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESAR 249 (343)
T ss_pred ccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHH
Confidence 33 34467888999999865 46788999999999999999999888643221100000 0000
Q ss_pred -----cccccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 -----MDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 -----~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.......+ ....+..+.+++.+||..+|.+|||+.+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 250 NYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000000 11236789999999999999999999999987
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=294.52 Aligned_cols=241 Identities=20% Similarity=0.185 Sum_probs=198.2
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 60 SEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
+.||+|.||+||-|+ .++|+.||||++.+..... ..++.+|+.+|+.++||.||.+...|.+.+.+++|||-+.| +
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-D 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-D 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-h
Confidence 457999999999999 5679999999998765443 45789999999999999999999999999999999999975 5
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeeccCCCcccCCCC---Cccc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDG---KSYS 210 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~---~~~~ 210 (488)
..+.|...+.++|++.....++.||+.||.|||-++ |+|+||||+|||+.+. -.+||||||.|+.+... .+..
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence 555554546788999999999999999999999999 9999999999999644 36899999999988765 3678
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
||+.|+|||+++.+.|+.+-|+||.|||+|--++|..||.....-.-..++..-+.++... .+++...++||..+|
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW----~eis~~AidlIn~LL 803 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPW----SEISPEAIDLINNLL 803 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCch----hhcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998886542211111111111111111 245678899999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 011349 291 QYEPRERPNAKSLVAS 306 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~ 306 (488)
+..-.+|.|.+..+.|
T Consensus 804 qVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 804 QVKMRKRYSVDKSLSH 819 (888)
T ss_pred HHHHHHhcchHhhccc
Confidence 9999999998887766
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=297.12 Aligned_cols=247 Identities=17% Similarity=0.222 Sum_probs=189.7
Q ss_pred ccccccCCCCCCceEEEEEe-CC--CcEEEEEEccCCC--CCChHHHHHHHHHHhhc-CCCCCcccccceecC----Cee
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DE--DRWIAVKRFNRSA--WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEG----EER 125 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~----~~~ 125 (488)
+.+.+.||+|+||.||++.. .+ +..||||++.... ....+.+.+|+.+++++ .||||+++++++... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 46778899999999999994 34 7789999986432 12245688999999999 599999999875432 457
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++++||+. ++|.+.+. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||+++....
T Consensus 82 ~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 82 YLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 89999996 78998886 4567999999999999999999999999 99999999999999999999999999975442
Q ss_pred C--------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh------------------
Q 011349 206 G--------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR------------------ 258 (488)
Q Consensus 206 ~--------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~------------------ 258 (488)
. ....+|..|+|||.+.+ ..++.++|||||||++|+|++|.+||.........
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 1 12467889999998765 46889999999999999999999887543210000
Q ss_pred -ccc---cccccccccCC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 259 -GKN---FLMLMDSCLEG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 259 -~~~---~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
... ........... ......+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000 00000000000 0111235789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=274.76 Aligned_cols=250 Identities=20% Similarity=0.240 Sum_probs=194.2
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC--------Ce
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--------EE 124 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------~~ 124 (488)
|..+.++|+|.||.||+|+ ..+|+.||+|++-..+ ..-.....+|+++|..+.|+|++.++..|... ..
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 4445678999999999999 5568889999875432 22345688999999999999999999998642 34
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
+|+||.+|+ -+|..++.. ....++..++.+++.++..||.|+|+.. |+|||+||+|+||+.+|.+||+|||+++...
T Consensus 99 ~ylVf~~ce-hDLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 99 FYLVFDFCE-HDLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred eeeeHHHhh-hhHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeecccccccee
Confidence 899999997 689988864 3467999999999999999999999998 9999999999999999999999999997654
Q ss_pred CCC--------ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhh-------hhcccccccccc
Q 011349 205 DGK--------SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-------IRGKNFLMLMDS 268 (488)
Q Consensus 205 ~~~--------~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~-------~~~~~~~~~~~~ 268 (488)
... ....|..|.+||.+.| ..++++.|||+-|||+.||+||.+.+.+..... .-+....+.++.
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~ 255 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN 255 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence 432 2234889999999987 679999999999999999999998776542211 111111111111
Q ss_pred ---------ccCCCCCh-------------hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 269 ---------CLEGHFSN-------------DDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 269 ---------~~~~~~~~-------------~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
....+.+. .-.++..+|+..++..||.+|+++++++.|--
T Consensus 256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 00000110 11246889999999999999999999999854
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=317.38 Aligned_cols=248 Identities=20% Similarity=0.231 Sum_probs=186.0
Q ss_pred HHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecC--
Q 011349 47 RAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG-- 122 (488)
Q Consensus 47 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-- 122 (488)
.+.-++| ..+..||+||||.||+++ .-+|+.||||+|.... ......+.+|+..|.+|+|||||+++..|.+.
T Consensus 475 SRY~~DF---EEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 475 SRYLNDF---EELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hhHhhhh---HHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 4555566 445567999999999999 4489999999998764 12234689999999999999999987644310
Q ss_pred --------------------------------------------------------------------------------
Q 011349 123 -------------------------------------------------------------------------------- 122 (488)
Q Consensus 123 -------------------------------------------------------------------------------- 122 (488)
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence
Q ss_pred -------------------------------------CeeeEEEecCCCCChhhhhccCCCCCC-CHHHHHHHHHHHHHH
Q 011349 123 -------------------------------------EERLLVAEFMPNETLSKHLFHWENQPM-KWAMRVRVALYLAQA 164 (488)
Q Consensus 123 -------------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l-~~~~~~~i~~~i~~~ 164 (488)
..+||-||||+..+|.+++.. +... .....++++++|++|
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~--N~~~~~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR--NHFNSQRDEAWRLFREILEG 709 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh--cccchhhHHHHHHHHHHHHH
Confidence 014788999998888877753 2222 467899999999999
Q ss_pred HHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC----------------------CCCccccccCCCCccccc
Q 011349 165 LDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR----------------------DGKSYSTNLAFTPPEYLR 222 (488)
Q Consensus 165 l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----------------------~~~~~~~t~~y~aPE~~~ 222 (488)
|.|+|++| +|||||||.||++|+++.|||+|||+|.... +.+...||.-|+|||++.
T Consensus 710 LaYIH~~g-iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 710 LAYIHDQG-IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHHHHhCc-eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 99999999 9999999999999999999999999998621 112457899999999998
Q ss_pred cC---CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC--CChhhHHHHHHHHHHhccCCCCCC
Q 011349 223 TG---RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FSNDDGTELVRLASRCLQYEPRER 297 (488)
Q Consensus 223 ~~---~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~R 297 (488)
+. .|+.|+|+||||||++||+.- |...- -+...+..+.+..++.+ +.....+.-..+|.+|++.||.+|
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~TsM---ERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kR 862 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLYP---FGTSM---ERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKR 862 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhcc---CCchH---HHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccC
Confidence 74 499999999999999999854 33221 11111111112211111 222233455789999999999999
Q ss_pred CCHHHHHHH
Q 011349 298 PNAKSLVAS 306 (488)
Q Consensus 298 ps~~~il~~ 306 (488)
||+.++|.+
T Consensus 863 PtA~eLL~s 871 (1351)
T KOG1035|consen 863 PTATELLNS 871 (1351)
T ss_pred CCHHHHhhc
Confidence 999999875
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=320.84 Aligned_cols=146 Identities=25% Similarity=0.276 Sum_probs=130.5
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+..|.++++||+|+||.||+|... +++.||||+++...... ...+..|+.++..++||||+++++++......|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 356788999999999999999954 68899999997543222 35788999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
|||+.|++|.+++. ....+++..++.|+.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~--~~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLH--IYGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999986 3456899999999999999999999999 9999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=281.84 Aligned_cols=249 Identities=16% Similarity=0.170 Sum_probs=197.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-C-CC----CcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-S-ER----LVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~n----iv~~~~~~~~~~~~~l 127 (488)
.|.++..+|+|+||.|-.+. .+.+..||||+++... .-.+...-|+++|+++. + |+ +|.+.++|...++.+|
T Consensus 90 Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCi 168 (415)
T KOG0671|consen 90 RYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICI 168 (415)
T ss_pred ceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEE
Confidence 56788999999999999998 4457889999997543 22345678999999993 2 32 7888889999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-------------------
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ------------------- 188 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~------------------- 188 (488)
|+|.+ |.|+.+++....-.+++..++..|+.|+++++.|||+.+ ++|-||||+|||+.+
T Consensus 169 vfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ 246 (415)
T KOG0671|consen 169 VFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL 246 (415)
T ss_pred EEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceeccC
Confidence 99999 679999998777788999999999999999999999999 999999999999932
Q ss_pred -CCCCeeccCCCcccCCCC-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhh---hhcccc-
Q 011349 189 -DGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL---IRGKNF- 262 (488)
Q Consensus 189 -~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~---~~~~~~- 262 (488)
+..++|+|||.|...... ...+.|..|.|||++.+-.++.++||||+||||.|+.||...|+.+.... +....+
T Consensus 247 ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG 326 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG 326 (415)
T ss_pred CCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC
Confidence 235789999999876654 45577999999999999999999999999999999999998887653111 000000
Q ss_pred --------------------------------ccccccccC----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 --------------------------------LMLMDSCLE----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 --------------------------------~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+.+.. .........++.+|+.+||..||.+|+|+.|++.|
T Consensus 327 p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 327 PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 000000000 00111234679999999999999999999999987
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=282.18 Aligned_cols=252 Identities=20% Similarity=0.285 Sum_probs=192.9
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc--CCCCCcccccceecCC----eeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL--RSERLVNLIGCCCEGE----ERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~----~~~lv~e 130 (488)
++++.+|+|.||.||+|.+ +++.||||++... +.+.|+.|-.+.+.. +|+||++++++-..+. .++||++
T Consensus 213 ~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hhHHHhhcCccceeehhhc-cCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 3455669999999999998 4478999999753 356788888877655 7999999999865554 7899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK--------GRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
|.+.|+|.++|+ ...++|....+|+..+++||+|||+. .+|+|||||..|||+-+|++.-|+|||||..
T Consensus 289 fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 289 FHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred eccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 999999999994 56799999999999999999999984 2399999999999999999999999999987
Q ss_pred CCCCC------ccccccCCCCccccccCC-cc-----cCCceEeehHHHHHHhhCCCCCCcchhh--------hhhc---
Q 011349 203 SRDGK------SYSTNLAFTPPEYLRTGR-VI-----PESVVYSFGTLLLDLLSGKHIPPSHALD--------LIRG--- 259 (488)
Q Consensus 203 ~~~~~------~~~~t~~y~aPE~~~~~~-~~-----~~sDv~slG~il~el~tg~~p~~~~~~~--------~~~~--- 259 (488)
...+. ...||.+|||||++.+.. +. .+.||||+|.|||||++..........+ .+..
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 65432 357899999999997632 22 3699999999999999876432100000 0000
Q ss_pred -ccccc-ccccccCCCCChh-----hHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 260 -KNFLM-LMDSCLEGHFSND-----DGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 260 -~~~~~-~~~~~~~~~~~~~-----~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..+.. ++....++.++.. -..-+.+.+..||+.||+.|.|+.=+-+.+..+.....
T Consensus 446 ~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 446 LEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 00111 1111122233322 24668899999999999999999998888887776554
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=302.27 Aligned_cols=244 Identities=14% Similarity=0.219 Sum_probs=204.4
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceec-----CCeeeEEE
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCE-----GEERLLVA 129 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~-----~~~~~lv~ 129 (488)
.|+..+|.|.+|.||+++ .++++.+|||+...+. ...+++..|..+|+.. .|||++.++|+|.. ++.++|||
T Consensus 22 ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVM 100 (953)
T KOG0587|consen 22 EIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVM 100 (953)
T ss_pred EEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEe
Confidence 677788999999999999 7789999999998766 3456788899999998 59999999999863 56899999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
|||.|||..|+++...+..+.|..+..|++.++.||.+||... ++|||||-.|||++.++.|||+|||++.....
T Consensus 101 EfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~gr 179 (953)
T KOG0587|consen 101 EFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGR 179 (953)
T ss_pred eccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeeccccc
Confidence 9999999999998877889999999999999999999999998 99999999999999999999999999876544
Q ss_pred CCccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccc-cccccCCCCChhhH
Q 011349 206 GKSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLML-MDSCLEGHFSNDDG 279 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 279 (488)
..+..||+.|||||++.. ..|+..+|+||||++..||.-|.+|+-.. .....+..+ ..+.....-+...+
T Consensus 180 RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm----HPmraLF~IpRNPPPkLkrp~kWs 255 (953)
T KOG0587|consen 180 RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM----HPMRALFLIPRNPPPKLKRPKKWS 255 (953)
T ss_pred ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc----chhhhhccCCCCCCccccchhhHH
Confidence 347789999999999964 34777999999999999999998775332 111111111 11122222355678
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.++|..||.+|.++||++.+++.|
T Consensus 256 ~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 256 KKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred HHHHHHHHHHHhhccccCcchhhhccC
Confidence 999999999999999999999999876
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=302.08 Aligned_cols=249 Identities=19% Similarity=0.268 Sum_probs=208.2
Q ss_pred cccccCCCCCCceEEEEE-eCCCc----EEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDR----WIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+..++||+|+||+||+|. ...|. +||||++..... ....++..|+-+|.+++|||+++++++|.... +.||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 345788999999999999 44443 689999876543 34678999999999999999999999997755 889999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcc-
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY- 209 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~- 209 (488)
|+++|+|.++++. .+.++.....+.|..||++||.|||.+. ++||||-.+|||+..-.++|+.|||+++........
T Consensus 778 ~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 778 LMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred hcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 9999999999976 5567999999999999999999999998 999999999999999999999999999987654322
Q ss_pred -----ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 210 -----STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 210 -----~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
...+.|||-|.+....++.+||||||||++||++| |..|..+... ..+..++....+...|+.++-++.
T Consensus 856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-----~eI~dlle~geRLsqPpiCtiDVy 930 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-----EEIPDLLEKGERLSQPPICTIDVY 930 (1177)
T ss_pred cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH-----HHhhHHHhccccCCCCCCccHHHH
Confidence 22467999999999999999999999999999988 6666655322 223333333344456777889999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.++.+||..|+..||+++++...+.++.+.
T Consensus 931 ~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 931 MVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred HHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 999999999999999999999998876554
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=278.38 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=194.6
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc--CCCCCcccccceecCC----eeeEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL--RSERLVNLIGCCCEGE----ERLLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~----~~~lv~e 130 (488)
.+++.+|+|.||.||+|.+ .|+.||||+|... +.+.+.+|.++.+.+ +|+||+.+++.-..+. .++||++
T Consensus 214 ~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTd 289 (513)
T KOG2052|consen 214 VLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTD 289 (513)
T ss_pred EEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeee
Confidence 5678899999999999998 6677999999743 467889999998876 9999999999865543 5899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----C--CcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-----G--RALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~--~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
|.+.|||.|+|. ...++....++++..++.||++||.. | -|.|||||..|||+..++..-|+|+|||-..
T Consensus 290 YHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h 366 (513)
T KOG2052|consen 290 YHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 366 (513)
T ss_pred cccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEe
Confidence 999999999994 57799999999999999999999963 2 2999999999999999999999999998755
Q ss_pred CCC--------CccccccCCCCccccccCC----c--ccCCceEeehHHHHHHhhCC----------CCCCcchhhhhhc
Q 011349 204 RDG--------KSYSTNLAFTPPEYLRTGR----V--IPESVVYSFGTLLLDLLSGK----------HIPPSHALDLIRG 259 (488)
Q Consensus 204 ~~~--------~~~~~t~~y~aPE~~~~~~----~--~~~sDv~slG~il~el~tg~----------~p~~~~~~~~~~~ 259 (488)
... ...+||.+|||||++.... + -..+||||||.|+||+.... .||.+........
T Consensus 367 ~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~ 446 (513)
T KOG2052|consen 367 DSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSF 446 (513)
T ss_pred cccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCH
Confidence 432 3568999999999997532 2 13699999999999987542 3444332221111
Q ss_pred cccccc-cccccCCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 260 KNFLML-MDSCLEGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 260 ~~~~~~-~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
+.+..+ ....+++.. +......+.+|++.||..+|..|.|+-.+.+.|.++..
T Consensus 447 eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 447 EEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 111111 111222222 23455778899999999999999999999999888775
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=307.98 Aligned_cols=250 Identities=20% Similarity=0.301 Sum_probs=205.3
Q ss_pred ccccCCCCCCceEEEEEeC----C----CcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 58 IVSEHGEKAPNVVYKGLVD----E----DRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
+.+.||+|.||.|++|... . ...||||.++..... +.+.+..|+++|..+ +|+||+.++|+|...+..++
T Consensus 300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~ 379 (609)
T KOG0200|consen 300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYV 379 (609)
T ss_pred ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEE
Confidence 3347899999999999832 1 346999999876533 356799999999999 69999999999999999999
Q ss_pred EEecCCCCChhhhhccCC------------C--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCe
Q 011349 128 VAEFMPNETLSKHLFHWE------------N--QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPR 193 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~k 193 (488)
|+||+..|+|.+++++.+ . ..++....+.++.||+.|+.||++.. +|||||-.+|||+..+..+|
T Consensus 380 v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~k 458 (609)
T KOG0200|consen 380 IVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIK 458 (609)
T ss_pred EEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEE
Confidence 999999999999997533 0 13889999999999999999999998 99999999999999999999
Q ss_pred eccCCCcccCCCCCcc-----cc--ccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc
Q 011349 194 LSCFGLMKNSRDGKSY-----ST--NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 194 l~Dfgla~~~~~~~~~-----~~--t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 266 (488)
|+|||+++.......+ .+ ...|||||.+....|+.+||||||||+||||+|...+|+.... ....+.+.+
T Consensus 459 IaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~---~~~~l~~~l 535 (609)
T KOG0200|consen 459 IADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP---PTEELLEFL 535 (609)
T ss_pred EccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC---cHHHHHHHH
Confidence 9999999976554322 11 2459999999999999999999999999999996654443210 011122234
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
....+...|..++.++.+++..||+.+|++||++.++.+.+....
T Consensus 536 ~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 536 KEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 444555667778899999999999999999999999999998853
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=277.70 Aligned_cols=247 Identities=21% Similarity=0.295 Sum_probs=193.3
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC-CCC------hHHHHHHHHHHhhcCCCCCcccccceec-CCeee
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA-WPD------SRQFLEEARAVGLLRSERLVNLIGCCCE-GEERL 126 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~ 126 (488)
|-++..||+|+|+.||+|. +..++.||||+-..+. +.+ .+...+|.++-+.|.||.||++|++|.- .+.+|
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC 544 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC 544 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence 4567789999999999999 6678899999865432 122 1246789999999999999999999965 45689
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeec---CCCCCeeccCCCccc
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFD---QDGNPRLSCFGLMKN 202 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~ 202 (488)
-|.|||+|.+|+-+|+ ....+++.++..|+.||+.||.||.+. .||||-||||.|||+- .-|.+||+||||++.
T Consensus 545 TVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 545 TVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred eeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 9999999999998887 567799999999999999999999986 4699999999999995 447899999999997
Q ss_pred CCCCC-----------ccccccCCCCccccccC----CcccCCceEeehHHHHHHhhCCCCCCcchh--hhhhccccccc
Q 011349 203 SRDGK-----------SYSTNLAFTPPEYLRTG----RVIPESVVYSFGTLLLDLLSGKHIPPSHAL--DLIRGKNFLML 265 (488)
Q Consensus 203 ~~~~~-----------~~~~t~~y~aPE~~~~~----~~~~~sDv~slG~il~el~tg~~p~~~~~~--~~~~~~~~~~~ 265 (488)
+.... ...||..|++||.+.-+ +.+.++||||.|||+|+++.|+.||-.... +.+....+...
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkA 702 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKA 702 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcc
Confidence 75432 24679999999998643 468899999999999999999999864421 11111111111
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ..-+.-+.++.+...+|.+||++.-++|....++..+
T Consensus 703 tE--VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 703 TE--VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred ee--ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 10 0111122456788999999999999999988887765
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=287.45 Aligned_cols=249 Identities=16% Similarity=0.180 Sum_probs=209.3
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCc-EEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDR-WIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
++..+++..||-|+||.|-++...... .+|+|++++...-+ .+.+..|-.+|..++.|.||++|--|.+...+|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 344467788999999999999865544 48999998654433 34588899999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
||-|-||.|+..+. .++.|+..+...++..+++|+.|||++| ||+|||||+|.++|.+|-+||.|||+|+.+..+.
T Consensus 499 mEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 499 MEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred HHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence 99999999999997 6778999999999999999999999999 9999999999999999999999999999887654
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
+++|||.|.|||.+.....+.++|.||||+++|||+||.+||.+...-. .. ..++..+-.-.+|..++....+|
T Consensus 576 TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk-tY---n~ILkGid~i~~Pr~I~k~a~~L 651 (732)
T KOG0614|consen 576 TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK-TY---NLILKGIDKIEFPRRITKTATDL 651 (732)
T ss_pred eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH-HH---HHHHhhhhhhhcccccchhHHHH
Confidence 7899999999999999999999999999999999999999886542111 11 11222222234666778889999
Q ss_pred HHHhccCCCCCCCC-----HHHHHHHhc
Q 011349 286 ASRCLQYEPRERPN-----AKSLVASLT 308 (488)
Q Consensus 286 i~~cl~~dp~~Rps-----~~~il~~l~ 308 (488)
|.+++..+|.+|.. +.+|-+|-.
T Consensus 652 ik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 652 IKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred HHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 99999999999964 777777743
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-36 Score=256.08 Aligned_cols=259 Identities=19% Similarity=0.265 Sum_probs=208.5
Q ss_pred cccCHHHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccc
Q 011349 39 REFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLI 116 (488)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~ 116 (488)
..++++.....+.+-+.|++++++|+|.++.||.|. ..+.+.++||++++.. .+.+.+|+.+|+.|+ ||||++++
T Consensus 23 eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~ 99 (338)
T KOG0668|consen 23 EYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLL 99 (338)
T ss_pred hhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehh
Confidence 457888877778888899999999999999999999 5678889999998654 568999999999997 99999999
Q ss_pred cceecC--CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCe
Q 011349 117 GCCCEG--EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPR 193 (488)
Q Consensus 117 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~k 193 (488)
+...++ ..+.||+||+.+.+...+. ..|+...+..++.+++.||.|+|+.| |+|||+||.|++||. .-.++
T Consensus 100 DiV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~rkLr 173 (338)
T KOG0668|consen 100 DIVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELRKLR 173 (338)
T ss_pred hhhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhceee
Confidence 998765 4688999999988777655 35888899999999999999999999 999999999999985 45699
Q ss_pred eccCCCcccCCCCCcc---ccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchh---hhhh--------
Q 011349 194 LSCFGLMKNSRDGKSY---STNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL---DLIR-------- 258 (488)
Q Consensus 194 l~Dfgla~~~~~~~~~---~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~---~~~~-------- 258 (488)
|+|+|+|....++..+ ..+..|--||.+.. ..++.+-|+|||||++..|+..+.||..... ....
T Consensus 174 lIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~ 253 (338)
T KOG0668|consen 174 LIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTD 253 (338)
T ss_pred eeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChH
Confidence 9999999988877654 44678899999976 5688999999999999999999998753210 0000
Q ss_pred -------------cccccccccc--------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 259 -------------GKNFLMLMDS--------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 259 -------------~~~~~~~~~~--------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+..++.. .....-..-.+++..+++.+.|..|-.+|+|+.|.+.|
T Consensus 254 el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 254 ELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 0011111111 11111111235789999999999999999999999987
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=268.45 Aligned_cols=233 Identities=22% Similarity=0.279 Sum_probs=192.8
Q ss_pred CCceEEEEEeC-CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhhhhcc
Q 011349 66 APNVVYKGLVD-EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH 143 (488)
Q Consensus 66 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 143 (488)
+||.||+|... +++.||+|++....... .+.+.+|++.+++++|+||+++++.+......++||||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 57899999965 58999999998766444 67899999999999999999999999998999999999999999999863
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---CccccccCCCCccc
Q 011349 144 WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEY 220 (488)
Q Consensus 144 ~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~ 220 (488)
...+++..++.++.+++.+|.+||+.+ ++|+||+|+||++++++.++|+|||.+...... ....++..|++||.
T Consensus 81 --~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 --RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 233899999999999999999999999 999999999999999999999999998876553 34567889999999
Q ss_pred cccCCcccCCceEeehHHHHHHhhCCCCCCcc-hhhhhhccccccccccccCCCCCh--hhHHHHHHHHHHhccCCCCCC
Q 011349 221 LRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH-ALDLIRGKNFLMLMDSCLEGHFSN--DDGTELVRLASRCLQYEPRER 297 (488)
Q Consensus 221 ~~~~~~~~~sDv~slG~il~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dp~~R 297 (488)
+.+..++.++||||||+++++|++|..|+... ..... .............. ..+.++.+++.+||..+|++|
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 232 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLEL-----FKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKR 232 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH-----HHHHhccCCCCccccccCCHHHHHHHHHHccCCchhc
Confidence 98888999999999999999999999887542 11111 11111111111111 156789999999999999999
Q ss_pred CCHHHHHHH
Q 011349 298 PNAKSLVAS 306 (488)
Q Consensus 298 ps~~~il~~ 306 (488)
|++.+++++
T Consensus 233 p~~~~~~~~ 241 (244)
T smart00220 233 LTAEEALQH 241 (244)
T ss_pred cCHHHHhhC
Confidence 999999874
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=284.45 Aligned_cols=259 Identities=18% Similarity=0.186 Sum_probs=200.4
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCccccc
Q 011349 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIG 117 (488)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~ 117 (488)
.|..|.++-=+=+-...|+.||-|+||.|.++. .++...+|+|.+.+...- ....+..|-.||..-+.+-||+||-
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 455566665555556788999999999999998 566778999998754322 2235678999999999999999999
Q ss_pred ceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 118 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
.|.+.+.+|+||+|++||++-.+|. .-+-|++..+..++.++.+|+.+.|..| +|||||||+|||||.+|++||+||
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeec
Confidence 9999999999999999999999998 4567999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCC---------CC-------------------------------------CccccccCCCCccccccCCcccCCc
Q 011349 198 GLMKNSR---------DG-------------------------------------KSYSTNLAFTPPEYLRTGRVIPESV 231 (488)
Q Consensus 198 gla~~~~---------~~-------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sD 231 (488)
||+.-.. .+ -...||+.|+|||++....++..+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 9974221 00 0235799999999999999999999
Q ss_pred eEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC---CHHHHHHH
Q 011349 232 VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP---NAKSLVAS 306 (488)
Q Consensus 232 v~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~il~~ 306 (488)
.||.|||||||+.|++||-....... ......+...+.-.+....+++..++|.+++ .+++.|. .+++|..|
T Consensus 854 wws~gvil~em~~g~~pf~~~tp~~t--q~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaH 928 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTPGET--QYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAH 928 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCCCcc--eeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcC
Confidence 99999999999999999865422211 1111122222333334445667777776655 3566774 34445554
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=249.28 Aligned_cols=198 Identities=19% Similarity=0.228 Sum_probs=167.6
Q ss_pred ccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCC
Q 011349 58 IVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+||+|++|.|-+.+ ..+|...|+|.+...-. +...+.++|+.+..+. .+|.+|.++|........++.||.|.
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~- 128 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD- 128 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-
Confidence 35678999999999988 56799999999976542 3345788899887766 69999999999999999999999996
Q ss_pred CChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--c-c
Q 011349 135 ETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--S-Y 209 (488)
Q Consensus 135 gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~-~ 209 (488)
-||..+..+ ..++.+++..+-+|+..+..||.|||++-.+||||+||+|||++.+|++|+||||++....+.- + .
T Consensus 129 tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~d 208 (282)
T KOG0984|consen 129 TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMD 208 (282)
T ss_pred hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHh
Confidence 788776543 2567899999999999999999999998669999999999999999999999999998766542 1 3
Q ss_pred ccccCCCCcccccc----CCcccCCceEeehHHHHHHhhCCCCCCcchhhh
Q 011349 210 STNLAFTPPEYLRT----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL 256 (488)
Q Consensus 210 ~~t~~y~aPE~~~~----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~ 256 (488)
.|-..|||||.+.. ..|+-+|||||||+++.||.+++.|++.+..+.
T Consensus 209 aGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF 259 (282)
T KOG0984|consen 209 AGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPF 259 (282)
T ss_pred cCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHH
Confidence 45678999999864 368899999999999999999999887664443
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=299.76 Aligned_cols=249 Identities=18% Similarity=0.199 Sum_probs=165.8
Q ss_pred CCcccccccCCCCCCceEEEEEe-CC----CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccc------eec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DE----DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGC------CCE 121 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~------~~~ 121 (488)
.+.+.+.+.||+|+||.||+|.+ .+ +..||||++.... ..+....+ .++...+.+++.+... ...
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence 44667888999999999999995 44 6889999986433 11111111 1222223333333222 134
Q ss_pred CCeeeEEEecCCCCChhhhhccCCC------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCc
Q 011349 122 GEERLLVAEFMPNETLSKHLFHWEN------------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183 (488)
Q Consensus 122 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~N 183 (488)
+...++||||+.+++|.+++..... .......+..++.||+.||.|||+.+ |+||||||+|
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLKP~N 285 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVKPQN 285 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCCHHH
Confidence 5678999999999999998863211 01123446689999999999999999 9999999999
Q ss_pred eeecC-CCCCeeccCCCcccCCCC-----CccccccCCCCccccccC----------------------CcccCCceEee
Q 011349 184 ILFDQ-DGNPRLSCFGLMKNSRDG-----KSYSTNLAFTPPEYLRTG----------------------RVIPESVVYSF 235 (488)
Q Consensus 184 ill~~-~~~~kl~Dfgla~~~~~~-----~~~~~t~~y~aPE~~~~~----------------------~~~~~sDv~sl 235 (488)
||++. ++.+||+|||+++..... ....+|+.|+|||.+... .++.++|||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl 365 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA 365 (566)
T ss_pred EEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence 99985 689999999999865332 345778999999966432 13346699999
Q ss_pred hHHHHHHhhCCCCCCcchhhhh---hc--c---ccccccccccCCC------CChhhHHHHHHHHHHhccCCCCCCCCHH
Q 011349 236 GTLLLDLLSGKHIPPSHALDLI---RG--K---NFLMLMDSCLEGH------FSNDDGTELVRLASRCLQYEPRERPNAK 301 (488)
Q Consensus 236 G~il~el~tg~~p~~~~~~~~~---~~--~---~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dp~~Rps~~ 301 (488)
||+||||+++..+......... .. . .+........... ..........+|+.+||..||++|||+.
T Consensus 366 GviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~ 445 (566)
T PLN03225 366 GLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAK 445 (566)
T ss_pred HHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHH
Confidence 9999999998654432211110 00 0 0001111110000 0001123455899999999999999999
Q ss_pred HHHHH
Q 011349 302 SLVAS 306 (488)
Q Consensus 302 ~il~~ 306 (488)
++++|
T Consensus 446 e~L~H 450 (566)
T PLN03225 446 AALAH 450 (566)
T ss_pred HHhCC
Confidence 99997
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=264.97 Aligned_cols=240 Identities=17% Similarity=0.248 Sum_probs=198.0
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 128 (488)
.+..+++.||+|+|..|..+. .++.+.+|+|++++.-. .+.+-.+.|-.+..+- +||.+|.+..+|.+...+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 345788899999999999999 56788899999986543 3455678888888877 699999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC----C
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS----R 204 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~ 204 (488)
.||++||+|--++. ..+.++++.+..+..+|+-||.|||+.| ||+||||..|||+|..|++||+|+|+++.. .
T Consensus 330 ieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~gd 406 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD 406 (593)
T ss_pred EEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCCCc
Confidence 99999999977665 5667999999999999999999999999 999999999999999999999999998753 2
Q ss_pred CCCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh----ccccccccccccCCCCChhhHH
Q 011349 205 DGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR----GKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 205 ~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
..++++|||.|+|||.++|..|.++.|.|+|||+++||+.|+.||.--..+... .-.+..++...+ .+|...+-
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--riprslsv 484 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPRSLSV 484 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--cccceeeh
Confidence 345789999999999999999999999999999999999999998643221111 111122222222 23445566
Q ss_pred HHHHHHHHhccCCCCCCC
Q 011349 281 ELVRLASRCLQYEPRERP 298 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rp 298 (488)
....++...|.+||.+|.
T Consensus 485 kas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 485 KASHVLKGFLNKDPKERL 502 (593)
T ss_pred hhHHHHHHhhcCCcHHhc
Confidence 778899999999999995
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=284.76 Aligned_cols=252 Identities=16% Similarity=0.172 Sum_probs=177.1
Q ss_pred cccccccCCCCCCceEEEEEe-----------------CCCcEEEEEEccCCCCCChHH--------------HHHHHHH
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-----------------DEDRWIAVKRFNRSAWPDSRQ--------------FLEEARA 103 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E~~~ 103 (488)
.+.+.++||+|+||+||+|.. ..++.||||+++.......++ ...|+.+
T Consensus 146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~ 225 (507)
T PLN03224 146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYM 225 (507)
T ss_pred CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHH
Confidence 446777889999999999963 235679999997654222223 3447777
Q ss_pred HhhcCCCCC-----cccccceec--------CCeeeEEEecCCCCChhhhhccCC----------------------CCC
Q 011349 104 VGLLRSERL-----VNLIGCCCE--------GEERLLVAEFMPNETLSKHLFHWE----------------------NQP 148 (488)
Q Consensus 104 l~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~ 148 (488)
+.+++|.++ ++++++|.. .+..+|||||+++++|.+++.... ...
T Consensus 226 l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~ 305 (507)
T PLN03224 226 CAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK 305 (507)
T ss_pred HHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence 777876554 677777653 346899999999999999886321 123
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----ccccccCCCCcccccc
Q 011349 149 MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 223 (488)
Q Consensus 149 l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~~~t~~y~aPE~~~~ 223 (488)
+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++....... ...+|+.|+|||.+..
T Consensus 306 ~~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~ 384 (507)
T PLN03224 306 RDINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM 384 (507)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence 467789999999999999999999 9999999999999999999999999997654322 1233789999998854
Q ss_pred CCc----------------------ccCCceEeehHHHHHHhhCCCCCCcchh---hhhhc-c----ccccccccccCCC
Q 011349 224 GRV----------------------IPESVVYSFGTLLLDLLSGKHIPPSHAL---DLIRG-K----NFLMLMDSCLEGH 273 (488)
Q Consensus 224 ~~~----------------------~~~sDv~slG~il~el~tg~~p~~~~~~---~~~~~-~----~~~~~~~~~~~~~ 273 (488)
... ..+.||||+||++++|++|..++..... ..... . .+.........-.
T Consensus 385 ~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~ 464 (507)
T PLN03224 385 PQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS 464 (507)
T ss_pred CCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcc
Confidence 221 1247999999999999999753222100 00000 0 0000000111111
Q ss_pred CChhhHHHHHHHHHHhccCCC---CCCCCHHHHHHHh
Q 011349 274 FSNDDGTELVRLASRCLQYEP---RERPNAKSLVASL 307 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp---~~Rps~~~il~~l 307 (488)
.....+....+|+.++|..+| .+|+|+.++++|-
T Consensus 465 ~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp 501 (507)
T PLN03224 465 LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHR 501 (507)
T ss_pred cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCC
Confidence 122346788999999999766 6899999999883
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=260.13 Aligned_cols=246 Identities=17% Similarity=0.250 Sum_probs=191.0
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC-----CeeeEEEec
Q 011349 60 SEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERLLVAEF 131 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~ 131 (488)
+.||.|+||+||-+. -++|+.||+|++...- ....+.+.+|+++|..++|.|++..++...-. ..+|+|+|+
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL 138 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL 138 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 457999999999998 4579999999986432 22356899999999999999999998876533 257899999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc---
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--- 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--- 208 (488)
|. .+|..+|. ..+.++...+.-++.||++||.|||+.+ |.||||||.|.|++++..+||||||+++.......
T Consensus 139 mQ-SDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM 214 (449)
T KOG0664|consen 139 MQ-SDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM 214 (449)
T ss_pred HH-hhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhhhh
Confidence 96 89999887 6778999999999999999999999999 99999999999999999999999999997655432
Q ss_pred --cccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchh--------hhhh-----------cccccccc
Q 011349 209 --YSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL--------DLIR-----------GKNFLMLM 266 (488)
Q Consensus 209 --~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~--------~~~~-----------~~~~~~~~ 266 (488)
...|..|.|||.++| ..|+.+.||||.||++.|++..+..|..... +... ++....++
T Consensus 215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~L 294 (449)
T KOG0664|consen 215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVL 294 (449)
T ss_pred HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhh
Confidence 244789999999998 5699999999999999999988877653311 0000 00111111
Q ss_pred ccccCC-C--------CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 267 DSCLEG-H--------FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 267 ~~~~~~-~--------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
....+. . .+..-..+...++..++..||++|.+..+.+.++..
T Consensus 295 R~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 295 RAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred ccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 111111 0 111223457788899999999999999999988643
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=284.72 Aligned_cols=240 Identities=23% Similarity=0.231 Sum_probs=181.0
Q ss_pred CCcccccccCCCCCCc-eEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPN-VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
|+...++ |.|+.| .||+|.+ .|+.||||++-... ..-.++|+..|+.- .|||||++++.-.+....||..|
T Consensus 511 ~~~~eil---G~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEIL---GYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHc---ccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 4444444 666555 5799998 66789999986543 34678999999999 59999999998888899999999
Q ss_pred cCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---C--CCCeeccCCCcccC
Q 011349 131 FMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---D--GNPRLSCFGLMKNS 203 (488)
Q Consensus 131 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~--~~~kl~Dfgla~~~ 203 (488)
.|. .+|.+++... ..........+.++.|++.||++||+.+ ||||||||.||||+- + .+++|+|||+++..
T Consensus 584 LC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 584 LCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred Hhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 996 8999999752 1111111345778999999999999998 999999999999975 3 46899999999977
Q ss_pred CCCC-------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhC-CCCCCcchhhhhhccccccccccccCCCCC
Q 011349 204 RDGK-------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 204 ~~~~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
..+. ...||-+|+|||++.....+.++|||||||++|..++| .+||-...... .++..-......-...
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~---~NIl~~~~~L~~L~~~ 738 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ---ANILTGNYTLVHLEPL 738 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh---hhhhcCccceeeeccC
Confidence 5432 44689999999999988888899999999999999998 45554331111 0100000000000001
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+ .+..+||.+|+..+|..||++.+|+.|
T Consensus 739 ~d--~eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 739 PD--CEAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred ch--HHHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 11 178999999999999999999999988
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-34 Score=277.05 Aligned_cols=248 Identities=17% Similarity=0.156 Sum_probs=205.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+|.++.++|.|++|.|||++ ..+++..|||+++.....+...++.|+-+++.++|||||-++|.+...+..+++||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 456778889999999999999 6679999999999888778888999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKS 208 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~ 208 (488)
.||+|.+..+ -.+++++.++..+.++.+.||.|||+.+ -+|||||-.|||+++.|.+|++|||.+..+.. ..+
T Consensus 95 gggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks 171 (829)
T KOG0576|consen 95 GGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS 171 (829)
T ss_pred CCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence 9999999776 5678999999999999999999999999 99999999999999999999999999876543 457
Q ss_pred cccccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-ccccccccCCCCChhhHHHHHH
Q 011349 209 YSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-LMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 209 ~~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
+.||+.|||||+.. .+.|+..+|||++|+...|+---.+|.... .+.....-. ....++. ...-.....+.+-+
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl-hpmr~l~LmTkS~~qpp-~lkDk~kws~~fh~ 249 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL-HPMRALFLMTKSGFQPP-TLKDKTKWSEFFHN 249 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc-chHHHHHHhhccCCCCC-cccCCccchHHHHH
Confidence 89999999999873 367899999999999999998777553221 111000000 0111111 11122345678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.|+.++|.+||+++.++.|
T Consensus 250 fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 250 FVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred HHHHHhcCCCccCCChhhheec
Confidence 9999999999999999998875
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-33 Score=264.32 Aligned_cols=250 Identities=18% Similarity=0.182 Sum_probs=198.3
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC------CCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR------SERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~ 126 (488)
+.|.+.+..|+|-|++|.+|. ...|..||||+|..+.. -.+.=++|+++|.+|. -.|+++++-.|.+.+++|
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 357888889999999999999 44578999999976542 1234568999999995 358999999999999999
Q ss_pred EEEecCCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCC
Q 011349 127 LVAEFMPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSR 204 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 204 (488)
||+|-+. -+|.++|++. .+..|....+..++.|+.-||..|-..| |+|.||||.|||+++. ..+||||||.|....
T Consensus 511 lVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ 588 (752)
T KOG0670|consen 511 LVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFAS 588 (752)
T ss_pred EEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCccccccc
Confidence 9999995 8999999753 3456888999999999999999999999 9999999999999865 568999999998776
Q ss_pred CCC--ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh----------------hccc-----
Q 011349 205 DGK--SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI----------------RGKN----- 261 (488)
Q Consensus 205 ~~~--~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~----------------~~~~----- 261 (488)
... .+..+..|.|||.+.|.+|+...|+||.||+||||.||+..|++.....+ ..+.
T Consensus 589 eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqH 668 (752)
T KOG0670|consen 589 ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQH 668 (752)
T ss_pred cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhh
Confidence 543 45567889999999999999999999999999999999999987632211 0000
Q ss_pred c-------------------ccccccc---------c--CCCCChh---hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 F-------------------LMLMDSC---------L--EGHFSND---DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 ~-------------------~~~~~~~---------~--~~~~~~~---~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+ ..++... + ...++.+ ....+.+|+..||..||++|.|..++|.|
T Consensus 669 FD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 669 FDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred cccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 0 0000000 0 0112222 33578899999999999999999999987
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-32 Score=248.14 Aligned_cols=243 Identities=17% Similarity=0.234 Sum_probs=190.2
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEccCC--CCCChHHHHHHHHHHhhcCCCCCcccccceecC------CeeeE
Q 011349 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRS--AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EERLL 127 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~l 127 (488)
.-++.+|.|.- .|.-+. .-.+++||+|++... .....++..+|..++..+.|+||++++.+|.-. ...|+
T Consensus 20 ~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~ 98 (369)
T KOG0665|consen 20 VNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYL 98 (369)
T ss_pred eeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHH
Confidence 33556788877 566665 335888999998644 234467889999999999999999999998643 35799
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
|||+|. .+|...+. -.++-.++..|..|++.|+.|||+.+ |+||||||+||++..+..+||.|||+++.....
T Consensus 99 v~e~m~-~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~ 172 (369)
T KOG0665|consen 99 VMELMD-ANLCQVIL----MELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDF 172 (369)
T ss_pred HHHhhh-hHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCccc
Confidence 999996 89988875 34788899999999999999999999 999999999999999999999999999876544
Q ss_pred --CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh-h---------------------------
Q 011349 207 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-L--------------------------- 256 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~-~--------------------------- 256 (488)
+.+..|..|.|||++.+..+...+||||+||++.||++|+..|++...- .
T Consensus 173 ~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv 252 (369)
T KOG0665|consen 173 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYV 252 (369)
T ss_pred ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHh
Confidence 3556789999999999988999999999999999999999888764110 0
Q ss_pred -----hhccccccccccccC-C--CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 257 -----IRGKNFLMLMDSCLE-G--HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 257 -----~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+.+.++.... . +.+......+.+++.+||..+|++|.|++++|.|
T Consensus 253 ~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 253 ENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000111111111111 0 1111234568899999999999999999999998
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=252.22 Aligned_cols=137 Identities=16% Similarity=0.205 Sum_probs=116.5
Q ss_pred HhcCCC--cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-----C---CCCccccc
Q 011349 49 ATSGFC--ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-----S---ERLVNLIG 117 (488)
Q Consensus 49 ~~~~~~--~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~ 117 (488)
...-|. .|.++++||.|.|++||++. ..+.+.||+|+.+... .-.+....||++|++++ | .+||+|++
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD 149 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLD 149 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeec
Confidence 334454 78899999999999999999 5678889999987543 23456788999999994 2 36999999
Q ss_pred ceec----CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec
Q 011349 118 CCCE----GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187 (488)
Q Consensus 118 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~ 187 (488)
.|.. +.++++|+|++ |.+|..+|....-+.++...+..|+.||+.||.|||+...|||-||||+|||+.
T Consensus 150 ~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 150 HFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred cceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 9965 46899999999 799999998766678999999999999999999999986699999999999993
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-32 Score=249.94 Aligned_cols=252 Identities=19% Similarity=0.203 Sum_probs=202.2
Q ss_pred cccccCCCCCCceEEEEEeCC------CcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceec-CCeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE------DRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCE-GEERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv 128 (488)
++.-.+-+|+||.||+|.+.+ .+.|-||.++....+- ...+..|...+..++|||+.++.+++.+ ...++++
T Consensus 287 ~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~ 366 (563)
T KOG1024|consen 287 RLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVL 366 (563)
T ss_pred echhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEE
Confidence 344456899999999997533 4457788887654332 3468899999999999999999999865 4578899
Q ss_pred EecCCCCChhhhhc-----c-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 129 AEFMPNETLSKHLF-----H-WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 129 ~e~~~~gsL~~~l~-----~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
+.++.-|+|..++. + ...+.++..+...++.|++.|+.|||+.+ |||.||-..|.+||+..++||+|=.+++.
T Consensus 367 y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRD 445 (563)
T KOG1024|consen 367 YPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRD 445 (563)
T ss_pred EeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhccc
Confidence 99998899999997 2 13356888899999999999999999999 99999999999999999999999999997
Q ss_pred CCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 203 SRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 203 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
.-+.. .......||+||.+....|+.++|||||||+||||+|-...|..+. ........+....+-..|.
T Consensus 446 LFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI----DPfEm~~ylkdGyRlaQP~ 521 (563)
T KOG1024|consen 446 LFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI----DPFEMEHYLKDGYRLAQPF 521 (563)
T ss_pred cCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc----CHHHHHHHHhccceecCCC
Confidence 76543 2234578999999999999999999999999999998554444331 1122223333344445677
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.||+++..++..||...|++||+++++..-|......
T Consensus 522 NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 522 NCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999998876543
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-32 Score=261.74 Aligned_cols=199 Identities=14% Similarity=0.175 Sum_probs=174.3
Q ss_pred HhcCCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC--------ChHHHHHHHHHHhhcC---CCCCcccc
Q 011349 49 ATSGFCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP--------DSRQFLEEARAVGLLR---SERLVNLI 116 (488)
Q Consensus 49 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---h~niv~~~ 116 (488)
.-++|++|..++++|.|+||.|++|.++ +...|+||.+.+...- ....+-.|+.+|..++ |+||++++
T Consensus 556 ~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 556 EYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLL 635 (772)
T ss_pred eecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhh
Confidence 3467889999999999999999999954 4667999998765421 1224678999999996 99999999
Q ss_pred cceecCCeeeEEEecC-CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeec
Q 011349 117 GCCCEGEERLLVAEFM-PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195 (488)
Q Consensus 117 ~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 195 (488)
++|.+++.+||+||-. +|-+|.++|. ....+++.++.-|++||+.|+++||+.+ |||||||-+||.++.+|-+||+
T Consensus 636 dfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 636 DFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred heeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEEe
Confidence 9999999999999974 5678999997 4567999999999999999999999999 9999999999999999999999
Q ss_pred cCCCcccCCCC--CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCC
Q 011349 196 CFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPP 250 (488)
Q Consensus 196 Dfgla~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~ 250 (488)
|||.+.....+ ..+.||..|.|||++.|.+| ...-|||++|++||.++....|++
T Consensus 713 dfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 713 DFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99998876554 57899999999999999876 567999999999999999888765
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=237.54 Aligned_cols=207 Identities=27% Similarity=0.378 Sum_probs=183.4
Q ss_pred CCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhh
Q 011349 62 HGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139 (488)
Q Consensus 62 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 139 (488)
||.|++|.||++... +++.++||++...... ....+.+|++.++.++|++|+++++++......+++||++.|++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 589999999999964 4889999999866532 24679999999999999999999999999899999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCcccCCCC----CccccccC
Q 011349 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG----KSYSTNLA 214 (488)
Q Consensus 140 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~----~~~~~t~~ 214 (488)
++... ...+++..+..++.+++.+|.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... ....+...
T Consensus 81 ~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKEN-EGKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 98632 146899999999999999999999999 999999999999998 899999999998866543 23456789
Q ss_pred CCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 215 FTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 215 y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
|++||.+... ..+.++|+|++|+++++| ..+.+++.+|+..+
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~ 201 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD 201 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence 9999999876 788999999999999998 46899999999999
Q ss_pred CCCCCCHHHHHHHh
Q 011349 294 PRERPNAKSLVASL 307 (488)
Q Consensus 294 p~~Rps~~~il~~l 307 (488)
|.+||++.++++++
T Consensus 202 p~~R~~~~~l~~~~ 215 (215)
T cd00180 202 PEKRPSAKEILEHL 215 (215)
T ss_pred cccCcCHHHHhhCC
Confidence 99999999998764
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=233.51 Aligned_cols=245 Identities=19% Similarity=0.207 Sum_probs=186.0
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccc-eecCCeeeEEEecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGC-CCEGEERLLVAEFM 132 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~-~~~~~~~~lv~e~~ 132 (488)
|+|.+.||+|.||.+-++.++ +.+.+++|-+.... ...++|.+|..---.| .|.||+.-|++ |...+..++++||+
T Consensus 26 y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~a 104 (378)
T KOG1345|consen 26 YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFA 104 (378)
T ss_pred hhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccC
Confidence 477888999999999999954 57789999987654 4578899999887777 48999988775 45567788999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec--CCCCCeeccCCCcccCCCCCcc-
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGNPRLSCFGLMKNSRDGKSY- 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~~~- 209 (488)
+.|+|..-+. ...+.+.-..+++.|++.||.|+|+++ +||||||.+||||- +..++||||||+.+.....-..
T Consensus 105 P~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~ 180 (378)
T KOG1345|consen 105 PRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYL 180 (378)
T ss_pred ccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceehhh
Confidence 9999999884 455889999999999999999999999 99999999999993 4458999999998766544322
Q ss_pred ccccCCCCccccccC-----CcccCCceEeehHHHHHHhhCCCCCCcchhhh---hhccccccccccccCCCCChhhHHH
Q 011349 210 STNLAFTPPEYLRTG-----RVIPESVVYSFGTLLLDLLSGKHIPPSHALDL---IRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~-----~~~~~sDv~slG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
..+..|.+||.+... ...+.+|||.||++++.++||..|+....... +....+..-....++..+. ..++.
T Consensus 181 ~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~-~fs~~ 259 (378)
T KOG1345|consen 181 EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFN-PFSEK 259 (378)
T ss_pred hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhc-ccCHH
Confidence 336789999987542 35789999999999999999998876432211 1111111111112222222 23466
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+..+..+-|..+|++|--..++.+.
T Consensus 260 a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 260 ALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred HHHHHHHhcCCcccccchhHHHHHH
Confidence 8889999999999999544444443
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=242.93 Aligned_cols=244 Identities=23% Similarity=0.334 Sum_probs=191.2
Q ss_pred cccccccCCCCCCceEEEEEe-C---CCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-D---EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+.++.+||.|+|++||++.. . .++.||+|.+.... ....+.+|+++|..+. +.||+++.+++..++...+|+
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence 457788899999999999993 3 46789999997654 4567999999999995 999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCcccCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSR---- 204 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~---- 204 (488)
||++...-.+++. .++...+..+++.++.||.++|.+| ||||||||+|+|.+ ..++-.|+|||+|....
T Consensus 115 p~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~ 188 (418)
T KOG1167|consen 115 PYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ 188 (418)
T ss_pred cccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence 9999988888874 3778999999999999999999999 99999999999997 45678999999986110
Q ss_pred -------------C--C-----------------------------CccccccCCCCcccccc-CCcccCCceEeehHHH
Q 011349 205 -------------D--G-----------------------------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLL 239 (488)
Q Consensus 205 -------------~--~-----------------------------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il 239 (488)
. + -...||++|.|||++.. ...++++||||-|||+
T Consensus 189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL 268 (418)
T ss_pred hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence 0 0 01247899999999876 5678999999999999
Q ss_pred HHHhhCCCCCCcchhhh--------------------hhcc-------c----------cccc-cccccC--------CC
Q 011349 240 LDLLSGKHIPPSHALDL--------------------IRGK-------N----------FLML-MDSCLE--------GH 273 (488)
Q Consensus 240 ~el~tg~~p~~~~~~~~--------------------~~~~-------~----------~~~~-~~~~~~--------~~ 273 (488)
+-+++++.||.....+. ..+. . +..+ ...+.. ..
T Consensus 269 Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~ 348 (418)
T KOG1167|consen 269 LSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREI 348 (418)
T ss_pred ehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecc
Confidence 99999999985431110 0001 0 0000 011111 11
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+..+.+++.+|+..||.+|.|+++.|.|
T Consensus 349 ~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 349 GSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 112234578999999999999999999999987
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=234.17 Aligned_cols=192 Identities=24% Similarity=0.284 Sum_probs=170.0
Q ss_pred cccccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 57 NIVSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.||.|++|.||++.... ++.+|+|.+...... ..+.+.+|++.++.++|+|++++++++......++++|++++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~ 81 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG 81 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence 455678999999999999654 889999999876544 567899999999999999999999999888999999999999
Q ss_pred CChhhhhccCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Cc
Q 011349 135 ETLSKHLFHWENQP-MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KS 208 (488)
Q Consensus 135 gsL~~~l~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 208 (488)
++|.+++.. ... +++..+..++.+++.+|.+||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 82 ~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (225)
T smart00221 82 GDLFDYLRK--KGGKLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT 158 (225)
T ss_pred CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence 999999863 233 899999999999999999999998 999999999999999999999999998876554 34
Q ss_pred cccccCCCCcccc-ccCCcccCCceEeehHHHHHHhhCCCCCCc
Q 011349 209 YSTNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLSGKHIPPS 251 (488)
Q Consensus 209 ~~~t~~y~aPE~~-~~~~~~~~sDv~slG~il~el~tg~~p~~~ 251 (488)
..++..|++||.+ ....++.++|||+||+++++|++|+.||+.
T Consensus 159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 5677889999998 667788899999999999999999998855
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-29 Score=272.89 Aligned_cols=192 Identities=15% Similarity=0.144 Sum_probs=142.2
Q ss_pred hcCC-CCCcccccce-------ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccc
Q 011349 106 LLRS-ERLVNLIGCC-------CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177 (488)
Q Consensus 106 ~l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~ 177 (488)
.++| +||++++++| .+...+++++|++ +++|.++|.. ....+++.+++.++.||+.||.|||+++ |+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG-IVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC-eeec
Confidence 4455 5788888877 2334577889988 5799999964 3456999999999999999999999999 9999
Q ss_pred cccCCceeec-------------------CCCCCeeccCCCcccCCCC--------------------CccccccCCCCc
Q 011349 178 DLNTYRILFD-------------------QDGNPRLSCFGLMKNSRDG--------------------KSYSTNLAFTPP 218 (488)
Q Consensus 178 Dlkp~Nill~-------------------~~~~~kl~Dfgla~~~~~~--------------------~~~~~t~~y~aP 218 (488)
||||+||||+ .++.+|++|||+++..... ....||+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 9999999994 3556778888887642110 013468889999
Q ss_pred cccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC
Q 011349 219 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298 (488)
Q Consensus 219 E~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 298 (488)
|++.+..++.++|||||||+||||++|.+|+...... .... .....+ ... ....+....++.+||..+|.+||
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~-~~~~-~~~~~~----~~~-~~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT-MSSL-RHRVLP----PQI-LLNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH-HHHH-HHhhcC----hhh-hhcCHHHHHHHHHhCCCChhhCc
Confidence 9999999999999999999999999988765432111 0000 000111 111 11134567889999999999999
Q ss_pred CHHHHHHHh
Q 011349 299 NAKSLVASL 307 (488)
Q Consensus 299 s~~~il~~l 307 (488)
++.+++++-
T Consensus 258 s~~eil~h~ 266 (793)
T PLN00181 258 SMSELLQSE 266 (793)
T ss_pred ChHHHhhch
Confidence 999999873
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-29 Score=222.19 Aligned_cols=254 Identities=20% Similarity=0.282 Sum_probs=204.5
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
++++-+++.+|.....|..|+|+++.+. +++|+++.... ...++|..|.-.|+-+.||||+.+++.|..+.++.++.
T Consensus 188 d~~~lnl~tkl~e~hsgelwrgrwqgnd-ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~is 266 (448)
T KOG0195|consen 188 DVSSLNLITKLAESHSGELWRGRWQGND-IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIIS 266 (448)
T ss_pred chhhhhhhhhhccCCCcccccccccCcc-hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEee
Confidence 3455567778899999999999996655 66788765432 23568999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccc-cccCCceeecCCCCCeeccCCCcccCCCCCc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKS 208 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~-Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 208 (488)
.||+.|||+..++...+-.++..++.+++.+|++|++|||+..|++.| -|....|++|++.+++|+ .+-++...+...
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~g 345 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVG 345 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccc
Confidence 999999999999876677788999999999999999999999878877 899999999999988874 233333333334
Q ss_pred cccccCCCCccccccCCc---ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRV---IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~---~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....|.||+||.++..+- -.++|+|||.+++||+.|...||.....-... ..+--..++..+|+..+..+.+|
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg----mkialeglrv~ippgis~hm~kl 421 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG----MKIALEGLRVHIPPGISRHMNKL 421 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh----hhhhhccccccCCCCccHHHHHH
Confidence 455789999999987553 34799999999999999999988654221111 11222334556777888999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 286 ASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
+.-|+..||.+||.+..|+-.|++++
T Consensus 422 m~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 422 MNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHhcCCCCcCCCcceehhhHHHhc
Confidence 99999999999999999999888764
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-28 Score=214.93 Aligned_cols=168 Identities=18% Similarity=0.126 Sum_probs=128.2
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccccC
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 214 (488)
|||.+++.. .+..+++.+++.|+.||+.||.|||+.+ ||+|||++.++.+|+ ||+++...... ..||+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 689999864 3456999999999999999999999987 999999999999999 99988665433 368899
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc-cC-CCCChhhHH--HHHHHHHHhc
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC-LE-GHFSNDDGT--ELVRLASRCL 290 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~--~l~~li~~cl 290 (488)
|||||++.+..++.++|||||||++|||+||+.|+............+....... .. ...+...+. .+.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 9999999999999999999999999999999988754311100000000000000 00 011122333 6999999999
Q ss_pred cCCCCCCCCHHHHHHHhchhhcc
Q 011349 291 QYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
..+|.+||++.+++.++..+..+
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred hcccccccCHHHHHHHHHHHHHH
Confidence 99999999999999998766543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=223.20 Aligned_cols=257 Identities=15% Similarity=0.117 Sum_probs=199.6
Q ss_pred cccccccCCCCCCceEEEEEeCCC--cEEEEEEccCCCCCChHHHHHHHHHHhhcCC----CCCcccccce-ecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDED--RWIAVKRFNRSAWPDSRQFLEEARAVGLLRS----ERLVNLIGCC-CEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~-~~~~~~~l 127 (488)
.+.+.++||+|+||.||+|..... ..+|+|............+..|+.++..+.. +++..+++.+ ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 578899999999999999995443 4789998876543333378899999999973 6899999998 47778999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-----CCCeeccCCCcc-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-----GNPRLSCFGLMK- 201 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-----~~~kl~Dfgla~- 201 (488)
||+.+ |.+|.++......+.++..+++.|+.|++.+|.+||+.| ++||||||+|++++.. ..+.|.|||+++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 99999 899999886545578999999999999999999999999 9999999999999855 358999999998
Q ss_pred -cCCC------------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc
Q 011349 202 -NSRD------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 268 (488)
Q Consensus 202 -~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 268 (488)
.... ...+.||..|+++..+.+...+++.|+||++.++.|++.|..|+........ ...+......
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~~ 255 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPRK 255 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhhh
Confidence 3211 1134589999999999999999999999999999999999977644321100 1111111111
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..........+.++..+...+-..+...+|....+...|+......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 256 LLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 1111122334577888888888899999999999999988776654
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-27 Score=205.39 Aligned_cols=265 Identities=15% Similarity=0.144 Sum_probs=209.4
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccce
Q 011349 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCC 119 (488)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 119 (488)
+.+++..++ .|.++++||+|+||.+|.|. ..+|..||||+-+... ...++..|.++.+.|+ ...|+.+..++
T Consensus 7 s~~~~iv~g----ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~ 80 (341)
T KOG1163|consen 7 SLEELIVGG----KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYG 80 (341)
T ss_pred chhhheecc----ceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhc
Confidence 445555444 47899999999999999999 7789999999976544 3357889999999996 57899999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeecc
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSC 196 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~D 196 (488)
.+...-.+||+++ |.||++++.- ..+.++..+++-++-|++.-+.|+|.++ +|||||||+|+|..-+ ..+.|+|
T Consensus 81 ~e~~ynvlVMdLL-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LID 157 (341)
T KOG1163|consen 81 TEKDYNVLVMDLL-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLID 157 (341)
T ss_pred cccccceeeeecc-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEe
Confidence 9999999999999 8999998753 5677999999999999999999999999 9999999999999743 4578999
Q ss_pred CCCcccCCC-----------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh--hhhccccc
Q 011349 197 FGLMKNSRD-----------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD--LIRGKNFL 263 (488)
Q Consensus 197 fgla~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~ 263 (488)
||+++...+ .....||..|.+-..+.+...+.+.|+-|+|.+|..+.-|..||.+-... ....+.+.
T Consensus 158 FGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~ 237 (341)
T KOG1163|consen 158 FGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKIS 237 (341)
T ss_pred ccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHH
Confidence 999986643 23567899999998888888899999999999999999999887664221 11111121
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
+..-...........|.++...+..|-..--++-|...-+.+.+.-+.....
T Consensus 238 EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln 289 (341)
T KOG1163|consen 238 EKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLN 289 (341)
T ss_pred HhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence 1111111222344567889999999999999999999888887776655443
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-27 Score=211.01 Aligned_cols=254 Identities=16% Similarity=0.166 Sum_probs=204.2
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++.++||+|+||+.+.|+ +-++++||||.-...+ ...++.-|.+..+.| ..++|+..+-+...+-.-.||||++
T Consensus 30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred ceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 4788999999999999999 7789999999876543 346788888888888 4799999999888888899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-----CCCeeccCCCcccCCCC--
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-----GNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-----~~~kl~Dfgla~~~~~~-- 206 (488)
|.||+|++ ...++.|+..++..++.|++.-++|+|++. +|.|||||+|+||+.- ..+.++|||+|+.+.+.
T Consensus 107 GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 107 GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 89999977 457888999999999999999999999999 9999999999999743 35789999999976543
Q ss_pred ---------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh--hccccccccccccCCCCC
Q 011349 207 ---------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--RGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 207 ---------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 275 (488)
.+..||.+||+-....|...+.+.|+-|||-++...+-|..||.+-..+.. ..+.+.+...........
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc 264 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLC 264 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHH
Confidence 356789999999999999999999999999999999999998876422211 111111111111111223
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...|.++..-+...-..+-.+-|..+-+...+..+....
T Consensus 265 ~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 265 EGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred hcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 345778888888888888899999988888777665543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=216.85 Aligned_cols=164 Identities=18% Similarity=0.076 Sum_probs=126.6
Q ss_pred ccccccCCCCCCceEEEEEeC--CCcEEEEEEccCCCC-----CChHHHHHHHHHHhhcCCCCCcc-cccceecCCeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD--EDRWIAVKRFNRSAW-----PDSRQFLEEARAVGLLRSERLVN-LIGCCCEGEERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~l 127 (488)
|.+.+.||+|+||+||+|.+. +++.||||++..... ...+.|.+|+++|++++|+|++. ++++ +..++
T Consensus 20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~L 95 (365)
T PRK09188 20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGL 95 (365)
T ss_pred ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEE
Confidence 567788899999999999853 577789998753311 12456899999999999999985 4432 45799
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc-cCCceeecCCCCCeeccCCCcccCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL-NTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dl-kp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
||||++|++|.. +. .. . ...++.+++.+|.|||+.| |+|||| ||+|||++.++.+||+|||+++.....
T Consensus 96 VmE~~~G~~L~~-~~--~~---~---~~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 96 VRGWTEGVPLHL-AR--PH---G---DPAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRR 165 (365)
T ss_pred EEEccCCCCHHH-hC--cc---c---hHHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceecccC
Confidence 999999999963 21 11 1 1467899999999999999 999999 999999999999999999999865433
Q ss_pred C------------ccccccCCCCccccccC------CcccCCceE
Q 011349 207 K------------SYSTNLAFTPPEYLRTG------RVIPESVVY 233 (488)
Q Consensus 207 ~------------~~~~t~~y~aPE~~~~~------~~~~~sDv~ 233 (488)
. ...+++.|++||.+.-. ..+..+|-|
T Consensus 166 ~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 166 GALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred cchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 2 23457789999998642 234456766
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=205.05 Aligned_cols=248 Identities=23% Similarity=0.270 Sum_probs=193.2
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCC-CCcccccceecCCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSE-RLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.+...||.|+||.||++... ..+++|.+....... ...+.+|+.+++.+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 456678899999999999875 779999998665333 56799999999999988 799999999777778999999
Q ss_pred CCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCC----
Q 011349 132 MPNETLSKHLFHWEN-QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~---- 205 (488)
+.++++.+++..... ..++......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||+++....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999977753111 26999999999999999999999999 99999999999999888 799999999875432
Q ss_pred ------CCccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhh---hhhccccccccccccCCC
Q 011349 206 ------GKSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALD---LIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 206 ------~~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~ 273 (488)
.....+|..|++||.+.+ ...+...|+||+|++++++++|..|+...... ......+.....+.....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence 245578999999999987 57888999999999999999999885543210 000000111110001111
Q ss_pred CCh----hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 274 FSN----DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 274 ~~~----~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
... .....+.+++..|+..+|..|.+.......
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111 113578899999999999999988887765
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-24 Score=190.14 Aligned_cols=140 Identities=16% Similarity=0.145 Sum_probs=110.7
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC--C-------hH-----------------HHHHHHHHHhhcCCCCC
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP--D-------SR-----------------QFLEEARAVGLLRSERL 112 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~-----------------~~~~E~~~l~~l~h~ni 112 (488)
.+.||+|+||.||+|...+|+.||||+++..... . .. ...+|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4678999999999999778999999999764321 1 01 22359999999988887
Q ss_pred cccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCcccccccCCceeecCCCC
Q 011349 113 VNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 113 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
.....+.. ...+|||||++|+++...+. ....++...+..++.|++.+|.++ |+.+ |+||||||+|||++ ++.
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CCc
Confidence 54333222 23489999999877765432 345799999999999999999999 6888 99999999999998 578
Q ss_pred CeeccCCCcccCC
Q 011349 192 PRLSCFGLMKNSR 204 (488)
Q Consensus 192 ~kl~Dfgla~~~~ 204 (488)
++|+|||++....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6e-24 Score=191.24 Aligned_cols=168 Identities=12% Similarity=0.047 Sum_probs=131.6
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHH---------HHHHHHHHhhcCCCCCcccccceecC---
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQ---------FLEEARAVGLLRSERLVNLIGCCCEG--- 122 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~~~~~~~~~--- 122 (488)
.+++++.+|.|+||.||+... ++..+|||.+.......... +.+|+..+.++.|++|..+.+++...
T Consensus 32 ~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~ 110 (232)
T PRK10359 32 NIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERK 110 (232)
T ss_pred ceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccc
Confidence 468888999999999999665 56679999998655433332 68999999999999999998886543
Q ss_pred -----CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 123 -----EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 123 -----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
+..+|||||++|.+|.++.. ++. ....+++.+|..+|+.| ++|||+||+||+++.+| ++|+||
T Consensus 111 ~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 111 TLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred cccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEEC
Confidence 35789999999999987642 333 24569999999999999 99999999999999888 999999
Q ss_pred CCcccCCCCCccccccCCCCccccccCCcccCCceEeehHHHHHHh
Q 011349 198 GLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 243 (488)
Q Consensus 198 gla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~ 243 (488)
|..+........ ..+.....+..++|+||||+++.-+.
T Consensus 179 g~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 179 SGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence 987655322111 01333455677999999999887653
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-24 Score=223.61 Aligned_cols=242 Identities=16% Similarity=0.107 Sum_probs=183.0
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEccCC--CCCChH----HHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 59 VSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRS--AWPDSR----QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...+|.|++|.|+.+. .......+.|.+... ...... .+..|+.+-..++|+|++..+..+.+.....-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 4457999999887776 333444555544311 111111 266788888899999999988888777766667999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 206 (488)
|++ +|..++. ....++...+-.++.|++.|+.|+|+.| +.|||+||+|++++.+|.+||+|||.+......
T Consensus 403 ~~~-Dlf~~~~--~~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 403 CPY-DLFSLVM--SNGKLTPLEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred ccH-HHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 998 9999996 3357899999999999999999999999 999999999999999999999999998754322
Q ss_pred ---CccccccCCCCccccccCCccc-CCceEeehHHHHHHhhCCCCCCcchhhhhh-----ccccccccccccCCCCChh
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIP-ESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----GKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~-~sDv~slG~il~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 277 (488)
....|+..|+|||.+.+..|.+ ..||||.|+++..|++|+.||......... ........ .-.......
T Consensus 479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 556 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIF--EGPNRLLSL 556 (601)
T ss_pred hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccc--cChHHHHHh
Confidence 2457889999999999999976 699999999999999999877543221110 00000000 000112234
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+...+.++.+||+.+|.+|.|+++|++.
T Consensus 557 lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 557 LPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred chhhHHHHHHHHccCChhheecHHHHhhC
Confidence 57788999999999999999999999975
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.9e-23 Score=182.62 Aligned_cols=142 Identities=17% Similarity=0.176 Sum_probs=113.2
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC---------------------C-----hHHHHHHHHHHhhcCCCC
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP---------------------D-----SRQFLEEARAVGLLRSER 111 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~n 111 (488)
+.+.||+|+||.||+|...+|+.||||+++..... . ...+.+|...+.++.|++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 1 INGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CCceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35678999999999999768999999999865311 0 112467899999999998
Q ss_pred CcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCC
Q 011349 112 LVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDG 190 (488)
Q Consensus 112 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~ 190 (488)
+.....+... ..+|||||++|+++..... ....++......++.|++.++.++|+ .| |+||||||+||+++ ++
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~ 154 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CC
Confidence 7554444332 2489999999876544322 33568888999999999999999999 88 99999999999999 88
Q ss_pred CCeeccCCCcccCCC
Q 011349 191 NPRLSCFGLMKNSRD 205 (488)
Q Consensus 191 ~~kl~Dfgla~~~~~ 205 (488)
.++|+|||++.....
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999986644
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-23 Score=207.31 Aligned_cols=224 Identities=20% Similarity=0.234 Sum_probs=186.4
Q ss_pred CCCCCCceEEEEE----eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCCC
Q 011349 62 HGEKAPNVVYKGL----VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 62 lG~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+|+|+||.|+++. .+.|..+|+|++++..... ......|..++..++ ||.+|++.-.+..+...++++++..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6999999999876 3347789999987644221 114456788888886 99999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCccccccC
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 214 (488)
|.|...+. ....++......+...++-++.++|+.+ ++|||+|++||+++.+|++++.|||+++........+||..
T Consensus 82 g~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e 158 (612)
T KOG0603|consen 82 GDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE 158 (612)
T ss_pred chhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence 99998886 4566888888899999999999999999 99999999999999999999999999998777666699999
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 294 (488)
|||||.+. ....++|.||||++++||+||..||.......+ +. .....|......+.+++..++..+|
T Consensus 159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~I--------l~--~~~~~p~~l~~~a~~~~~~l~~r~p 226 (612)
T KOG0603|consen 159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRI--------LK--AELEMPRELSAEARSLFRQLFKRNP 226 (612)
T ss_pred hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHH--------hh--hccCCchhhhHHHHHHHHHHHhhCH
Confidence 99999998 467789999999999999999988866211111 11 1234566778889999999999999
Q ss_pred CCCCCH
Q 011349 295 RERPNA 300 (488)
Q Consensus 295 ~~Rps~ 300 (488)
..|.-.
T Consensus 227 ~nrLg~ 232 (612)
T KOG0603|consen 227 ENRLGA 232 (612)
T ss_pred HHHhcc
Confidence 999543
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-23 Score=212.96 Aligned_cols=243 Identities=18% Similarity=0.206 Sum_probs=180.3
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCC-CCChHHHHHHHHH--HhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSA-WPDSRQFLEEARA--VGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+....+.||++.|=.|.+|+++.|. |+||++-... .-..+.|.+.++- ...++|||++.+.-+-....-.|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4456678899999999999988888 9999986544 2334444444443 4444899999999888778888999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+. .+|+|.|. .+.-+..-+...|+.|++.||.-+|..| |+|||||.+||||+..+.+.|+||...+...-..
T Consensus 103 vk-hnLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 103 VK-HNLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred Hh-hhhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 96 79999996 4555777888999999999999999999 9999999999999999999999999876432111
Q ss_pred -------ccccccCCCCccccccC----------C-cccCCceEeehHHHHHHhhC-CCCCCcchhhhhhcccccccccc
Q 011349 208 -------SYSTNLAFTPPEYLRTG----------R-VIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDS 268 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~----------~-~~~~sDv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~ 268 (488)
+...-..|+|||.+... . .+++.||||+||+++||++- ++||.-...-.++... ......
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~e~ 257 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDPEQ 257 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCHHH
Confidence 11223569999987531 1 67899999999999999886 5444322211122211 111111
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.+.. + ....++.++..|++.||++|.++++.|+.-
T Consensus 258 ~Le~-I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 258 LLEK-I---EDVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred HHHh-C---cCccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 1111 1 123689999999999999999999999873
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-21 Score=172.15 Aligned_cols=180 Identities=14% Similarity=0.097 Sum_probs=137.9
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC----hHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecC
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD----SRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+...|++|+||+||.+.. .+.+++.+.+.....-. ...+.+|+++|++|. |+++++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 455679999999997765 67778888887654311 125789999999995 5889999885 3469999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc-cCCceeecCCCCCeeccCCCcccCCCCCcc--
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL-NTYRILFDQDGNPRLSCFGLMKNSRDGKSY-- 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dl-kp~Nill~~~~~~kl~Dfgla~~~~~~~~~-- 209 (488)
.|.+|...+. . ....++.|++.+|.++|+.| |+|||| ||+|||++.++.++|+|||++.........
T Consensus 81 ~G~~L~~~~~---~------~~~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 81 AGAAMYQRPP---R------GDLAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred cCccHHhhhh---h------hhHHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 9999875442 1 12357889999999999999 999999 799999999999999999999855433210
Q ss_pred ---------------ccccCCCCcccccc-CCcc-cCCceEeehHHHHHHhhCCCCCCcc
Q 011349 210 ---------------STNLAFTPPEYLRT-GRVI-PESVVYSFGTLLLDLLSGKHIPPSH 252 (488)
Q Consensus 210 ---------------~~t~~y~aPE~~~~-~~~~-~~sDv~slG~il~el~tg~~p~~~~ 252 (488)
..++.|++|+...- ...+ ...+.++-|+-+|.++|++.+...+
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 13567777765432 1233 4678899999999999999876543
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.2e-22 Score=195.52 Aligned_cols=209 Identities=20% Similarity=0.295 Sum_probs=163.9
Q ss_pred HhhcCCCCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCc-ccccccCC
Q 011349 104 VGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRA-LYHDLNTY 182 (488)
Q Consensus 104 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~i-iH~Dlkp~ 182 (488)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++.-...++++|+.||.|||... | .|+.++++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP-IGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc-ceeeeeeccc
Confidence 4678999999999999999999999999999999999975 4567999999999999999999999986 5 99999999
Q ss_pred ceeecCCCCCeeccCCCcccCCCC------CccccccCCCCccccccC-------CcccCCceEeehHHHHHHhhCCCCC
Q 011349 183 RILFDQDGNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTG-------RVIPESVVYSFGTLLLDLLSGKHIP 249 (488)
Q Consensus 183 Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~-------~~~~~sDv~slG~il~el~tg~~p~ 249 (488)
|.++|..+.+||+|||+....... ........|.|||.+++. ..+.+.||||||++++|+++.+.||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 999999999999999998766421 112234679999999863 1467899999999999999999988
Q ss_pred Ccchhhhhhccccccc---cccccCCCCC-h-hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 250 PSHALDLIRGKNFLML---MDSCLEGHFS-N-DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 250 ~~~~~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..........+....+ .....++... . ..++++..++.+||..+|..||+++.+-..++.+.+..
T Consensus 159 ~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred ccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 6532211111111111 1111222221 1 34557999999999999999999999999988777653
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-21 Score=174.25 Aligned_cols=107 Identities=21% Similarity=0.325 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
....|+.++.+|+.+++.++|++|+..|++||+++|+ ++.+|.|||.+|.++|+|+.|+++|+.||.+||.+.++|-++
T Consensus 77 ~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~RL 155 (304)
T KOG0553|consen 77 DKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGRL 155 (304)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHHH
Confidence 4467899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|.+|+.+|++++|++.|++||++||++.
T Consensus 156 G~A~~~~gk~~~A~~aykKaLeldP~Ne 183 (304)
T KOG0553|consen 156 GLAYLALGKYEEAIEAYKKALELDPDNE 183 (304)
T ss_pred HHHHHccCcHHHHHHHHHhhhccCCCcH
Confidence 9999999999999999999999999874
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.8e-21 Score=172.83 Aligned_cols=133 Identities=15% Similarity=0.092 Sum_probs=105.5
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-----CCCCCcccccceecCC---eee-EEEe
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-----RSERLVNLIGCCCEGE---ERL-LVAE 130 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~---~~~-lv~e 130 (488)
..||+|+||.||. ..+++. .+||++........+.+.+|+.+++.+ .||||++++|++.++. ..+ +|||
T Consensus 8 ~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 8 SPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred ceecCCCceEEEE-CCCCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 3569999999995 323444 479998776545567899999999999 5799999999998763 333 7899
Q ss_pred c--CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCcccccccCCceeecC----CCCCeeccCCCc
Q 011349 131 F--MPNETLSKHLFHWENQPMKWAMRVRVALYLAQAL-DYCSSKGRALYHDLNTYRILFDQ----DGNPRLSCFGLM 200 (488)
Q Consensus 131 ~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgla 200 (488)
| +++++|.+++.. ..+++. ..++.+++.++ .|||+++ |+||||||+|||++. ++.++|+||+.+
T Consensus 86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 9 567999999953 346655 36678888888 9999999 999999999999973 347999995544
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-21 Score=181.20 Aligned_cols=227 Identities=20% Similarity=0.200 Sum_probs=146.6
Q ss_pred cccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCC----------CCCcccccceec---
Q 011349 59 VSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRS----------ERLVNLIGCCCE--- 121 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h----------~niv~~~~~~~~--- 121 (488)
.+.||.|+++.||.+.+ .+++.+|||++..... ...+++.+|.-....+.+ -.++--++...-
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 35689999999999995 4689999999865442 234567777655555322 122222222211
Q ss_pred ------C---C-----eeeEEEecCCCCChhhhhcc---CCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCC
Q 011349 122 ------G---E-----ERLLVAEFMPNETLSKHLFH---WEN--QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTY 182 (488)
Q Consensus 122 ------~---~-----~~~lv~e~~~~gsL~~~l~~---~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~ 182 (488)
. . +.+++|+-+. ++|.+++.- ... ..+....++.+..|+++.+++||+.| ++|+||||+
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi~~~ 174 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-LVHGDIKPE 174 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGG
T ss_pred CcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-eEeccccee
Confidence 1 1 2467888885 788887642 111 12334456677799999999999999 999999999
Q ss_pred ceeecCCCCCeeccCCCcccCCCCCc-cccccCCCCcccccc--------CCcccCCceEeehHHHHHHhhCCCCCCcch
Q 011349 183 RILFDQDGNPRLSCFGLMKNSRDGKS-YSTNLAFTPPEYLRT--------GRVIPESVVYSFGTLLLDLLSGKHIPPSHA 253 (488)
Q Consensus 183 Nill~~~~~~kl~Dfgla~~~~~~~~-~~~t~~y~aPE~~~~--------~~~~~~sDv~slG~il~el~tg~~p~~~~~ 253 (488)
|++++.+|.++|+||+.......... ...+..|.+||.... -.++.+.|.|+||+++|.|++|..|+....
T Consensus 175 nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~ 254 (288)
T PF14531_consen 175 NFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSS 254 (288)
T ss_dssp GEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCG
T ss_pred eEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCC
Confidence 99999999999999998766554333 344678999997743 247889999999999999999998876442
Q ss_pred hhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCC
Q 011349 254 LDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297 (488)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 297 (488)
....... .+ ..+. +.|..+..||..+|+.+|.+|
T Consensus 255 ~~~~~~~----~f-----~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 255 PEADPEW----DF-----SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GGSTSGG----GG-----TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccccccc----cc-----hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 2111111 11 1223 678899999999999999987
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-20 Score=174.74 Aligned_cols=191 Identities=15% Similarity=0.171 Sum_probs=145.4
Q ss_pred CCCCCcccccceecC---------------------------CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHH
Q 011349 108 RSERLVNLIGCCCEG---------------------------EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALY 160 (488)
Q Consensus 108 ~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 160 (488)
+|||||++.++|.+. ..+|+||.-.+ .+|..++- ....+.....-|+.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~---~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLW---TRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHh---cCCCchHHHHHHHHH
Confidence 699999999988642 24789998886 79999984 455777788889999
Q ss_pred HHHHHHHHHhCCCcccccccCCceee--cCCCC--CeeccCCCcccCCC----------CCccccccCCCCccccccCC-
Q 011349 161 LAQALDYCSSKGRALYHDLNTYRILF--DQDGN--PRLSCFGLMKNSRD----------GKSYSTNLAFTPPEYLRTGR- 225 (488)
Q Consensus 161 i~~~l~~LH~~~~iiH~Dlkp~Nill--~~~~~--~kl~Dfgla~~~~~----------~~~~~~t~~y~aPE~~~~~~- 225 (488)
+++|+.|||.+| |.|||+|.+|||+ |+|+. +.|+|||.+--... .-...|+-..||||+....+
T Consensus 350 lLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999999 9999999999999 45553 68999997642221 11334567789999987522
Q ss_pred ----c-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCH
Q 011349 226 ----V-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNA 300 (488)
Q Consensus 226 ----~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 300 (488)
. -.++|.|+.|.+.||+++...||+....-...... ..+..-+..+..+++.+++++...|+.||++|++.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~----Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT----YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh----hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 1 24899999999999999999999874332222222 12222345667788999999999999999999987
Q ss_pred HHHHHHh
Q 011349 301 KSLVASL 307 (488)
Q Consensus 301 ~~il~~l 307 (488)
.-....|
T Consensus 505 ~iAANvl 511 (598)
T KOG4158|consen 505 NIAANVL 511 (598)
T ss_pred cHHHhHH
Confidence 7665554
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.9e-20 Score=169.32 Aligned_cols=158 Identities=16% Similarity=0.095 Sum_probs=119.0
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCceEEEEE--eCCCcEEEEEEccCCCCC-------------------C-----h
Q 011349 41 FNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGL--VDEDRWIAVKRFNRSAWP-------------------D-----S 94 (488)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~-------------------~-----~ 94 (488)
.+..++....+.=..+.+.+.||+|+||.||+|. ..+|+.||||+++..... . .
T Consensus 15 ~~~~~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (237)
T smart00090 15 RTRLALYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVR 94 (237)
T ss_pred HHHHHHHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHH
Confidence 3444444444333356788899999999999998 568999999998754311 0 1
Q ss_pred HHHHHHHHHHhhcCCCC--CcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 011349 95 RQFLEEARAVGLLRSER--LVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG 172 (488)
Q Consensus 95 ~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 172 (488)
..+.+|+.++.++.+.+ ++++++. ...++||||++|++|..... ....+...+...++.||+.+|.+||+.+
T Consensus 95 ~~~~~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g 168 (237)
T smart00090 95 LWAEKEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEG 168 (237)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 23568999999997533 3444432 23589999999988876543 2345666778899999999999999997
Q ss_pred CcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 173 RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 173 ~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
+++||||||+||+++ ++.++|+|||.+.....
T Consensus 169 ~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 169 ELVHGDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred CEEeCCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 799999999999999 88999999999875443
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-19 Score=165.00 Aligned_cols=134 Identities=18% Similarity=0.169 Sum_probs=113.7
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--------hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--------SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.||+|++|.||+|.. .|..|+||+........ ...+.+|+.++..+.|++++....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4679999999999987 67779999876443221 13578899999999999988877777777888999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
++|++|.+++.. . .+ .+..++.+++.+|.++|+.+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~--~---~~-~~~~i~~~i~~~l~~lH~~~-i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINS--N---GM-EELELSREIGRLVGKLHSAG-IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHh--c---cH-HHHHHHHHHHHHHHHHHhCC-cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999998852 1 12 88899999999999999999 99999999999999 78999999998764
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.1e-20 Score=180.73 Aligned_cols=168 Identities=23% Similarity=0.335 Sum_probs=128.0
Q ss_pred eeeEEEecCCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 124 ERLLVAEFMPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
.+||.|++|...+|.++|.+. .....++...+.++.|++.|+.| ++ .+|+|+||.||+...+..+||.|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheee
Confidence 478999999999999999743 34467888999999999999999 77 99999999999999999999999999765
Q ss_pred CCCCC----------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCC-CCCCcchhhhhhccccccccccccC
Q 011349 203 SRDGK----------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK-HIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 203 ~~~~~----------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
..... ...||..||+||.+.+..|+.++||||||++|+|+++-- ..+. ....+..+-+..+.
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e-------r~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE-------RIATLTDIRDGIIP 478 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH-------HHHhhhhhhcCCCC
Confidence 54332 356899999999999999999999999999999999731 1111 11111222222222
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHH
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 303 (488)
+.+-.+. +.-..|+.+++...|.+||++.+.
T Consensus 479 ~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 479 PEFLQDY-PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hHHhhcC-cHHHHHHHHhcCCCcccCchHHHH
Confidence 1121122 334689999999999999955444
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-19 Score=190.01 Aligned_cols=240 Identities=16% Similarity=0.137 Sum_probs=175.3
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC---CCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR---SERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.+.|-+.+|+|+||.||+|...+|+.||+|+-++.+.= +|.-=.+++.+|+ -+-|..+..++.-.+.-+||+||
T Consensus 699 ~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey 775 (974)
T KOG1166|consen 699 KFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEY 775 (974)
T ss_pred eEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeec
Confidence 34677889999999999999778999999998765421 1222233444444 24566666666667788999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-------CCCCCeeccCCCcccCC
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-------QDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-------~~~~~kl~Dfgla~~~~ 204 (488)
.+.|||.+++. ..+.++|..+..++.|+++.+..||..+ |||+||||+|+||. +..-++|+|||-+-.+.
T Consensus 776 ~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 776 SPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred cccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 99999999997 5677999999999999999999999999 99999999999994 23458999999876443
Q ss_pred ---CCC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 205 ---DGK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 205 ---~~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
++. ...+|-.+-.+|+..|.+++...|.|.|.-+++-|+.|+..- ...+....+... ++...
T Consensus 853 lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------~~~g~~~~~~~~-----~~Ry~ 920 (974)
T KOG1166|consen 853 LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------VKNGSSWMVKTN-----FPRYW 920 (974)
T ss_pred EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------hcCCcceecccc-----chhhh
Confidence 332 335688899999999999999999999999999999998421 111111111111 11111
Q ss_pred -HHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 279 -GTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 279 -~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
-.-+-+++..+|..|-..=|...++...|+.+..
T Consensus 921 ~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 921 KRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred hHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence 1235567777777443333777777777766544
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.5e-19 Score=158.54 Aligned_cols=137 Identities=17% Similarity=0.142 Sum_probs=109.0
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC----------------------ChHHHHHHHHHHhhcCCCC--
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP----------------------DSRQFLEEARAVGLLRSER-- 111 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h~n-- 111 (488)
+.+.+.||+|+||.||++...+|+.||||++...... ....+.+|+.++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 4667788999999999999878999999987653310 0113678999999998774
Q ss_pred CcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 112 LVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 112 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++..++ ....++||||++|++|..... ......++.+++.++.++|+.+ ++||||||+||+++.++.
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~g-i~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHG-IIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCC-CCcCCCCcccEEEcCCCc
Confidence 444443 234589999999999976542 1345678899999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCC
Q 011349 192 PRLSCFGLMKNSRD 205 (488)
Q Consensus 192 ~kl~Dfgla~~~~~ 205 (488)
++|+|||++.....
T Consensus 164 ~~liDfg~~~~~~~ 177 (198)
T cd05144 164 IYIIDWPQMVSTDH 177 (198)
T ss_pred EEEEECCccccCCC
Confidence 99999999865543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.2e-19 Score=158.96 Aligned_cols=129 Identities=17% Similarity=0.192 Sum_probs=106.6
Q ss_pred CCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--------hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 62 HGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--------SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 62 lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
||+|+||.||+|.+ +|..|++|......... ...+.+|++++..++|+++.....++......++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 69999999999985 67789999865433211 2457789999999998876665555666677899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
|++|.+.+.. .. . .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||+++.
T Consensus 81 g~~l~~~~~~--~~-~------~~~~~i~~~l~~lH~~g-i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEE--GN-D------ELLREIGRLVGKLHKAG-IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhh--cH-H------HHHHHHHHHHHHHHHCC-eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999988742 11 1 78999999999999999 99999999999999 88999999999865
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-19 Score=185.48 Aligned_cols=200 Identities=19% Similarity=0.162 Sum_probs=143.4
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.|+.+..|++|-||.++++ +.+++|+ ++++.+ -+.+. ++.....|.+ |
T Consensus 85 f~~IklisngAygavylvrh~~trqrfa~-kiNkq~-----lilRn--ilt~a~npfv---------------v------ 135 (1205)
T KOG0606|consen 85 FNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN-----LILRN--ILTFAGNPFV---------------V------ 135 (1205)
T ss_pred cceeEeeccCCCCceeeeeccccccchhh-cccccc-----hhhhc--cccccCCcce---------------e------
Confidence 367888899999999999964 4677888 554333 11111 2222222222 2
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---------
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--------- 205 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--------- 205 (488)
|+-...++ .-++++... +.++.|||+.+ |+|||+||+|.+|+.-|++|+.|||+++....
T Consensus 136 gDc~tllk--~~g~lPvdm--------vla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg 204 (1205)
T KOG0606|consen 136 GDCATLLK--NIGPLPVDM--------VLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEG 204 (1205)
T ss_pred chhhhhcc--cCCCCcchh--------hHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhc
Confidence 44444454 223444333 67899999999 99999999999999999999999999764311
Q ss_pred ----------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 206 ----------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 206 ----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
....+||+.|+|||++..+.|...+|.|++|+|+||.+-|..||.++....+-...+...+ ...+-.
T Consensus 205 ~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i---~wpE~d 281 (1205)
T KOG0606|consen 205 HIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI---EWPEED 281 (1205)
T ss_pred chHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc---cccccC
Confidence 1234789999999999999999999999999999999999999988754443332222211 112223
Q ss_pred hhhHHHHHHHHHHhccCCCCCCC
Q 011349 276 NDDGTELVRLASRCLQYEPRERP 298 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rp 298 (488)
...++++++++.++|+.+|..|-
T Consensus 282 ea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 282 EALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred cCCCHHHHHHHHHHHHhChHhhc
Confidence 34568899999999999999993
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-18 Score=177.63 Aligned_cols=133 Identities=20% Similarity=0.179 Sum_probs=108.1
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEc-cCC-CCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRF-NRS-AWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~-~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..+.||+|+||+||+|.+.... +++|+. ... ... ..+.+.+|++++..++|++++....++......++||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred ccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 3567799999999999875544 444432 211 111 1246889999999999999998877777777889999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
||++|++|.+++. ....++.+++.+|.+||+.+ ++||||||+|||+ +++.++|+|||+++..
T Consensus 416 E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g-iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 416 EYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG-IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC-CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999998873 45778999999999999999 9999999999999 5789999999998753
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-17 Score=148.00 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=99.8
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHH----------------------HHHHHHHHhhcCCCC--C
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQ----------------------FLEEARAVGLLRSER--L 112 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~n--i 112 (488)
.+.||+|+||.||+|...+++.||||+++...... ... ...|...+.++.+.+ +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 45789999999999997789999999987543211 111 135666666664433 4
Q ss_pred cccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCC
Q 011349 113 VNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 113 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~ 191 (488)
++.+++ ...++||||++|+++..... ...... .....++.+++.++.++|. .+ ++|+||||+||+++ ++.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l--~~~~~~-~~~~~~~~~~~~~l~~lh~~~~-ivH~Dl~p~Nili~-~~~ 152 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRL--KDVRLL-EDPEELYDQILELMRKLYREAG-LVHGDLSEYNILVD-DGK 152 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhh--hhhhhc-ccHHHHHHHHHHHHHHHhhccC-cCcCCCChhhEEEE-CCc
Confidence 444433 24589999999855432111 111111 6778999999999999999 88 99999999999999 899
Q ss_pred CeeccCCCcccCCC
Q 011349 192 PRLSCFGLMKNSRD 205 (488)
Q Consensus 192 ~kl~Dfgla~~~~~ 205 (488)
++|+|||.+.....
T Consensus 153 ~~liDfg~a~~~~~ 166 (187)
T cd05119 153 VYIIDVPQAVEIDH 166 (187)
T ss_pred EEEEECcccccccC
Confidence 99999999975543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.6e-17 Score=142.90 Aligned_cols=135 Identities=16% Similarity=0.025 Sum_probs=114.2
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCC--CCCcccccceecCCeeeEEEecCCCC
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS--ERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
+++.+|.|.++.||++...+ ..++||....... ...+.+|+.+++.++| .++++++++....+..+++|||++|+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35678999999999999755 6799999876542 4679999999999976 58999998888778899999999987
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK---GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 136 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++..+ +......++.+++.+|.++|.. + ++|+|++|.||+++..+.++++|||.+.....
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~-i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLV-LCHGDLHPGNILVDDGKILGIIDWEYAGYGPP 141 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceE-EEecCCCcceEEEECCcEEEEEecccccCCCh
Confidence 77543 5667788899999999999985 5 99999999999999989999999999875443
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.1e-17 Score=149.14 Aligned_cols=133 Identities=18% Similarity=0.157 Sum_probs=103.0
Q ss_pred CC-CCCCceEEEEEeCCCcEEEEEEccCCCC-------------CChHHHHHHHHHHhhcCCCCC--cccccceecCC--
Q 011349 62 HG-EKAPNVVYKGLVDEDRWIAVKRFNRSAW-------------PDSRQFLEEARAVGLLRSERL--VNLIGCCCEGE-- 123 (488)
Q Consensus 62 lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~~-- 123 (488)
|| .|+.|+||.+... +..++||.+..... .....+.+|+.++.++.|++| +..+++.....
T Consensus 39 lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~ 117 (239)
T PRK01723 39 VGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL 117 (239)
T ss_pred eecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc
Confidence 46 7788889988874 66699998854221 123468899999999998885 66676644322
Q ss_pred --eeeEEEecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 124 --ERLLVAEFMPN-ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 124 --~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
..++|||+++| .+|.+++. ..+++.. .+.+|+.+|.+||+.| |+||||||.|||++.++.++|+|||.+
T Consensus 118 ~~~~~lV~e~l~G~~~L~~~l~---~~~l~~~----~~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 118 FYRADILIERIEGARDLVALLQ---EAPLSEE----QWQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred ceeeeEEEEecCCCCCHHHHHh---cCCCCHH----HHHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 23599999997 68988874 3345544 3578999999999999 999999999999998899999999998
Q ss_pred ccC
Q 011349 201 KNS 203 (488)
Q Consensus 201 ~~~ 203 (488)
...
T Consensus 190 ~~~ 192 (239)
T PRK01723 190 ELR 192 (239)
T ss_pred ccC
Confidence 754
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.4e-18 Score=176.60 Aligned_cols=250 Identities=17% Similarity=0.133 Sum_probs=190.6
Q ss_pred CCcccccccCCCCCCceEEEEEe--CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV--DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 127 (488)
...+.+++.||+|+|+.|-.... .....+|+|.+.... .........|..+-..+. |+|++++++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 45567778899999999988874 334557777776543 122334556888888886 9999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccccccCCceeecCCC-CCeeccCCCcccCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS-SKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRD 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~ 205 (488)
+++|..|+++.+.+........+....-.++.|+..++.|+| ..+ +.|+|+||+|.+++..+ .++++|||+|.....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999999883222225677788889999999999999 888 99999999999999999 999999999987665
Q ss_pred -CC------cccc-ccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC--CCC
Q 011349 206 -GK------SYST-NLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE--GHF 274 (488)
Q Consensus 206 -~~------~~~~-t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 274 (488)
.. ...| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+........ ........... ...
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~ 254 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG---RYSSWKSNKGRFTQLP 254 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc---cceeecccccccccCc
Confidence 22 3467 9999999999874 457789999999999999999987654322211 11111111111 111
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.........+++.+++..+|..|.+.+++...
T Consensus 255 ~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 255 WNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cccCChhhhhcccccccCCchhcccccccccc
Confidence 22345667889999999999999999888765
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.2e-16 Score=133.07 Aligned_cols=103 Identities=13% Similarity=0.143 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..++..|..+++.|+|++|+..|++++.++|. +..+|.++|.++..+|++++|+..|++|++++|+++.+++++|.++
T Consensus 24 p~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l 102 (144)
T PRK15359 24 PETVYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCL 102 (144)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 345778899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+|++++|++.|++|++++|++.
T Consensus 103 ~~~g~~~eAi~~~~~Al~~~p~~~ 126 (144)
T PRK15359 103 KMMGEPGLAREAFQTAIKMSYADA 126 (144)
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999864
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-16 Score=154.62 Aligned_cols=103 Identities=25% Similarity=0.462 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..-+.+|+.+|+.|+|..|+..|++||+.+|+ ++.+|.|||.||.+++.+..|++|++++|+++|++.++|.++|.++
T Consensus 358 A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al 436 (539)
T KOG0548|consen 358 AEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAAL 436 (539)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 667788899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+.+|++|++.|.+++++||++.
T Consensus 437 ~~mk~ydkAleay~eale~dp~~~ 460 (539)
T KOG0548|consen 437 RAMKEYDKALEAYQEALELDPSNA 460 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhH
Confidence 999999999999999999999864
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.8e-16 Score=150.77 Aligned_cols=103 Identities=29% Similarity=0.494 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..+..+|++++..|||+.|+..|++||.++|. +..+|.||+.||..+|+|++|+++..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 456789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+|+|++|+..|.++|+.||+++
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~ 104 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNK 104 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchH
Confidence 999999999999999999999874
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.9e-16 Score=129.93 Aligned_cols=109 Identities=18% Similarity=0.256 Sum_probs=101.6
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS----PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT 453 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~ 453 (488)
.....+..++..|+.+|.+|+|++|...|+.||++.|.-. ..+|.|+|.|+++++.++.||.+|.+||+|+|.+.+
T Consensus 90 k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~k 169 (271)
T KOG4234|consen 90 KAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEK 169 (271)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHH
Confidence 3457788999999999999999999999999999998722 358999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 454 AFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 454 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|+.++|.+|.++.+|++|+++|++.+++||.++
T Consensus 170 Al~RRAeayek~ek~eealeDyKki~E~dPs~~ 202 (271)
T KOG4234|consen 170 ALERRAEAYEKMEKYEEALEDYKKILESDPSRR 202 (271)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchH
Confidence 999999999999999999999999999999864
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-15 Score=151.07 Aligned_cols=241 Identities=22% Similarity=0.235 Sum_probs=184.5
Q ss_pred cccccCCC--CCCceEEEEEe---CCCcEEEEEEccC--CCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEE
Q 011349 57 NIVSEHGE--KAPNVVYKGLV---DEDRWIAVKRFNR--SAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 57 ~~~~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+|. |.+|.||.+.. .++..+|+|+-+. ........=.+|+....++ .|+|.++.+..+...+..++-
T Consensus 117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq 196 (524)
T KOG0601|consen 117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ 196 (524)
T ss_pred ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence 44567799 99999999885 4577899998443 3223344456777777788 499999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccC
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ----ALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNS 203 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~ 203 (488)
+|++ +.+|..+... ...-++....+.+..+... ||.++|+.+ ++|-|+||.||++..+ ...+++|||+...+
T Consensus 197 tE~~-~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 197 TELC-GESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred eccc-cchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeEEc
Confidence 9999 4888888763 2234788888999999999 999999999 9999999999999988 78899999998877
Q ss_pred CCCC---------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC
Q 011349 204 RDGK---------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 204 ~~~~---------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
.+.. ...+...|++||... +.++..+|+|++|.++.+..++..++...-. ..+.++-...+..++
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-----~~W~~~r~~~ip~e~ 347 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN-----SSWSQLRQGYIPLEF 347 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC-----CCccccccccCchhh
Confidence 6543 114567899999987 5788899999999999999999876532211 112222222233344
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+.++...+..+++.+|-.|++.+.+.++
T Consensus 348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 44445667779999999999999998877664
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5e-15 Score=135.19 Aligned_cols=104 Identities=25% Similarity=0.336 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..++++|+.||++|.|++||.||+++|..+|. ++.++.|||.+|+++++|..|..+|+.|+.|+..+.+||.++|.
T Consensus 95 ~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~~ 173 (536)
T KOG4648|consen 95 KKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRMQ 173 (536)
T ss_pred HhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHHH
Confidence 44556899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+...+|+..||.++++.+|+|+|+.
T Consensus 174 AR~~Lg~~~EAKkD~E~vL~LEP~~ 198 (536)
T KOG4648|consen 174 ARESLGNNMEAKKDCETVLALEPKN 198 (536)
T ss_pred HHHHHhhHHHHHHhHHHHHhhCccc
Confidence 9999999999999999999999984
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.6e-15 Score=144.62 Aligned_cols=102 Identities=24% Similarity=0.333 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 463 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 463 (488)
..+..+|+.++..|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhccccccc
Q 011349 464 GLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 464 ~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|+|++|+.+|++|++++|++.
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~ 104 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDS 104 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999864
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.1e-15 Score=141.69 Aligned_cols=98 Identities=24% Similarity=0.379 Sum_probs=94.0
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
++.+.|.+++++||.+|++|+|++||++|++||++.|+ .+..|.||+.||..+|++++.++++.+|++++|++.+|+++
T Consensus 110 ~~~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~R 188 (606)
T KOG0547|consen 110 ERLKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLR 188 (606)
T ss_pred HHHHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHH
Confidence 34577899999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHH
Q 011349 458 QAAALFGLGMNNDAQETLK 476 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~ 476 (488)
++.++..+|++++|+.+..
T Consensus 189 RA~A~E~lg~~~eal~D~t 207 (606)
T KOG0547|consen 189 RASAHEQLGKFDEALFDVT 207 (606)
T ss_pred HHHHHHhhccHHHHHHhhh
Confidence 9999999999999998865
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-14 Score=120.83 Aligned_cols=101 Identities=18% Similarity=0.048 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+..+..|..|..+++.|++++|...|+-+..++|. ++..|+++|.|+..+|+|++|+..|.+|+.++|+++.++++.|.
T Consensus 33 ~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~ 111 (157)
T PRK15363 33 QPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAE 111 (157)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 55678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~ 482 (488)
|++.+|+.++|.+.|+.|+..-
T Consensus 112 c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 112 CYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999775
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.4e-15 Score=148.36 Aligned_cols=140 Identities=20% Similarity=0.139 Sum_probs=99.2
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCCh----------------------------------------HHHHH
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS----------------------------------------RQFLE 99 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~ 99 (488)
+.||.|++|.||+|++.+|+.||||+.++...... -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 46899999999999998999999999875421100 02455
Q ss_pred HHHHHhhcC----CCCCccccccee-cCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHH-HHHHHHhCCC
Q 011349 100 EARAVGLLR----SERLVNLIGCCC-EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ-ALDYCSSKGR 173 (488)
Q Consensus 100 E~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~-~l~~LH~~~~ 173 (488)
|+..+.++. |.+-+.+-.++. ..+..+|||||++|++|.+...... ..+ ....++..++. .+..+|..|
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~l~ql~~~g- 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLARSFLNQVLRDG- 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHHHHHHHhCC-
Confidence 666666662 222222222222 2345789999999999988764211 112 23456666666 468889999
Q ss_pred cccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 174 ALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 174 iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
++|+|+||.||+++.++.++++|||++....
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999986553
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.5e-15 Score=138.33 Aligned_cols=109 Identities=20% Similarity=0.316 Sum_probs=99.5
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC--------------chHHHhcHHHHHHhhCCHHHHHHHHHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV--------------SPTVFARRCLCYLLSDMPQEALGDAMQ 443 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~~~ 443 (488)
+.++.|...+.+|+.+|+.|+|..|...|++|+..-+.. ...+++|+|.||+++++|.+|+..+++
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 577888999999999999999999999999998543210 125799999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 444 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|+++|+|.+|+|++|.|+..+|+|+.|+.+|++|++++|+|+
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nk 325 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNK 325 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcH
Confidence 9999999999999999999999999999999999999999975
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.3e-14 Score=136.20 Aligned_cols=105 Identities=11% Similarity=-0.017 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..|+++|..+...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|++.|+++++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+++..|++++|++.|+++++++|++.
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999753
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-13 Score=116.13 Aligned_cols=105 Identities=13% Similarity=0.211 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++...+.+|..++..|++++|+..|+++++.+|. ++.++.++|.++..+|++++|+..++++++++|+++..++.+|.
T Consensus 15 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~ 93 (135)
T TIGR02552 15 EQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAE 93 (135)
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 45677899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|++.
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~p~~~ 119 (135)
T TIGR02552 94 CLLALGEPESALKALDLAIEICGENP 119 (135)
T ss_pred HHHHcCCHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999865
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.8e-13 Score=122.51 Aligned_cols=107 Identities=14% Similarity=0.096 Sum_probs=100.3
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHH-HhhCC--HHHHHHHHHHHHHhCCCCHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCY-LLSDM--PQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~-~~~~~--~~~A~~~~~~al~l~p~~~~a~ 455 (488)
..+++..|...|..+...|++++|+..|++|++++|+ ++.++.++|.++ ...|+ +++|++.++++++++|+++.++
T Consensus 69 ~P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al 147 (198)
T PRK10370 69 NPQNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTAL 147 (198)
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHH
Confidence 3467889999999999999999999999999999999 999999999985 67787 5999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 456 YLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 456 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+|.+++.+|++++|+.+|+++++++|.+.
T Consensus 148 ~~LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 148 MLLASDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 9999999999999999999999999988643
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.3e-14 Score=136.58 Aligned_cols=106 Identities=13% Similarity=0.074 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.-+.+..+.|..+-++|++++|+.+|++||.+.|. .+.+|.|+|..|-.+|+.++|+++|++||+++|.+++|+.++|.
T Consensus 386 ~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLas 464 (966)
T KOG4626|consen 386 EFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNLAS 464 (966)
T ss_pred hhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhHHH
Confidence 44678889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccccC
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKHR 487 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~~ 487 (488)
+|...|+..+|++.|+.||+++||-++
T Consensus 465 i~kDsGni~~AI~sY~~aLklkPDfpd 491 (966)
T KOG4626|consen 465 IYKDSGNIPEAIQSYRTALKLKPDFPD 491 (966)
T ss_pred HhhccCCcHHHHHHHHHHHccCCCCch
Confidence 999999999999999999999999664
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.7e-13 Score=120.33 Aligned_cols=129 Identities=19% Similarity=0.075 Sum_probs=97.4
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCC-cccccceecCCeeeEEEecCCCCCh
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERL-VNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
++.++.|.++.||++... +..|++|....... ....+.+|+.+++.+.+.++ ++++.+. ....++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 356789999999999874 67799999865432 23357889999999976554 4555443 3345899999999887
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----cccccccCCceeecCCCCCeeccCCCccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGR----ALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
...- . ....++.+++++|..||+.+. ++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 6431 1 113456799999999999871 49999999999999 67899999998764
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.8e-14 Score=144.75 Aligned_cols=144 Identities=15% Similarity=0.110 Sum_probs=93.4
Q ss_pred CCcccccccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCC--------------------------C--------hH--
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWP--------------------------D--------SR-- 95 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------------------------~--------~~-- 95 (488)
|+.+.. +.+|+|++|.||+|++++ |+.||||++++.-.. + .+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 333444 678999999999999776 999999999754210 0 01
Q ss_pred ----HHHHHHHHHhhcC----CCCCcccccceec-CCeeeEEEecCCCCChhhhhccCCCC----CCCHHHHHHHHHHHH
Q 011349 96 ----QFLEEARAVGLLR----SERLVNLIGCCCE-GEERLLVAEFMPNETLSKHLFHWENQ----PMKWAMRVRVALYLA 162 (488)
Q Consensus 96 ----~~~~E~~~l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~----~l~~~~~~~i~~~i~ 162 (488)
++.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+++.++-.-...+ .+....+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 2445555555552 3333333333322 34568999999999998742110111 13333333334443
Q ss_pred HHHHHHHhCCCcccccccCCceeecCCC----CCeeccCCCcccCCC
Q 011349 163 QALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNSRD 205 (488)
Q Consensus 163 ~~l~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~~~ 205 (488)
+..| ++|+|+||.||+++.++ .++++|||++.....
T Consensus 277 ------f~~G-ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 ------FRDG-FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------HhCC-eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 4578 99999999999999888 999999999876543
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.4e-14 Score=127.53 Aligned_cols=200 Identities=17% Similarity=0.208 Sum_probs=141.9
Q ss_pred HHHhhcCCCCCcccccceecC-----CeeeEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-C
Q 011349 102 RAVGLLRSERLVNLIGCCCEG-----EERLLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKG-R 173 (488)
Q Consensus 102 ~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~ 173 (488)
..|-++-|.|||+++.++.+. ....+++|||..|+|..+|++. ....+......+|+.||+.||.|||+.. +
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 345566799999999998653 3578999999999999999753 3456888889999999999999999974 5
Q ss_pred cccccccCCceeecCCCCCeeccCCCcccC------C--CCCccccccCCCCccccccCCcccCCceEeehHHHHHHhhC
Q 011349 174 ALYHDLNTYRILFDQDGNPRLSCFGLMKNS------R--DGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 245 (488)
Q Consensus 174 iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~------~--~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg 245 (488)
|+|+++...-|++..+|-+|+.----.... . ......+-++|.+||.-.....+-++|||+||...+||..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 899999999999998888887421111000 0 01112345889999998777788899999999999999988
Q ss_pred CCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhch
Q 011349 246 KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309 (488)
Q Consensus 246 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 309 (488)
..-+................+ .. .....=+.++..|+...|..||+|.+++-|.--
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i----~~----len~lqr~~i~kcl~~eP~~rp~ar~llfHpll 334 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVI----IG----LENGLQRGSITKCLEGEPNGRPDARLLLFHPLL 334 (458)
T ss_pred eeccCCCcceeehhhhhhhhe----ee----ccCccccCcCcccccCCCCCCcchhhhhcCcee
Confidence 753222111101111111100 00 001122567899999999999999999988543
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.7e-13 Score=132.67 Aligned_cols=163 Identities=14% Similarity=0.162 Sum_probs=129.0
Q ss_pred eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHH
Q 011349 75 VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154 (488)
Q Consensus 75 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~ 154 (488)
..++.+|.|...+...........+-++.|+.++||||+++++.+...+..|||+|-+ ..|..++.. ++...+
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~-----l~~~~v 106 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE-----LGKEEV 106 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH-----hHHHHH
Confidence 5678889999988766433456788899999999999999999999999999999999 478888853 345666
Q ss_pred HHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCc----cccccCCCCccccccCCcccCC
Q 011349 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS----YSTNLAFTPPEYLRTGRVIPES 230 (488)
Q Consensus 155 ~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~----~~~t~~y~aPE~~~~~~~~~~s 230 (488)
.-.+.||+.||.|||..+.++|++|.-+-|+++..|..||++|-++........ ..---.|..|+.+.... -..
T Consensus 107 ~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~ 184 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSI 184 (690)
T ss_pred HHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cch
Confidence 677899999999999776699999999999999999999999988765433221 11122455665543221 346
Q ss_pred ceEeehHHHHHHhhCC
Q 011349 231 VVYSFGTLLLDLLSGK 246 (488)
Q Consensus 231 Dv~slG~il~el~tg~ 246 (488)
|.|.|||+++|++.|.
T Consensus 185 D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 185 DSWGLGCLIEELFNGS 200 (690)
T ss_pred hhhhHHHHHHHHhCcc
Confidence 9999999999999994
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.3e-13 Score=117.26 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=107.4
Q ss_pred cCchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhh--------ccCCCC---------chHHHhcH
Q 011349 362 KDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFI--------DGGTMV---------SPTVFARR 424 (488)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai--------~~~p~~---------~~~~~~~~ 424 (488)
...++...+.+.-...+.++....+.++||.+|+.|+|.+|...|..|| +..|-+ ...++.|.
T Consensus 157 e~P~qYq~e~WqlsddeKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy 236 (329)
T KOG0545|consen 157 EAPSQYQRETWQLSDDEKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNY 236 (329)
T ss_pred cCchhhccccccCCchHhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhH
Confidence 3444455566666667788889999999999999999999999999997 223430 33578999
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 425 CLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 425 a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+.|++..|+|-++++++..++..+|+|.+|||++|.++..--+.++|.++|.++|++||.
T Consensus 237 ~QC~L~~~e~yevleh~seiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldps 296 (329)
T KOG0545|consen 237 CQCLLKKEEYYEVLEHCSEILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPS 296 (329)
T ss_pred HHHHhhHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChh
Confidence 999999999999999999999999999999999999999999999999999999999995
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.6e-13 Score=134.35 Aligned_cols=243 Identities=16% Similarity=0.120 Sum_probs=179.4
Q ss_pred cccccCCCCCCceEEEEEe--CCCcEEEEEEccCCCCCChHH--HHHHHHHHhhc-CCCCCcccccceecCCeeeEEEec
Q 011349 57 NIVSEHGEKAPNVVYKGLV--DEDRWIAVKRFNRSAWPDSRQ--FLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..+..||.|.|+.|+.... .++..+++|.+.........+ -..|+-+...+ .|.++++....|......|+--||
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~ 347 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEF 347 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhh
Confidence 5677889999999999873 457789999887654333322 34577777777 599999998888888888899999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCCCC-Ccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDG-KSY 209 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~-~~~ 209 (488)
|.++++...+. ....+.+..++++..|++.++.++|+.. ++|+|+||+||++..+ +.-++.|||......-. ...
T Consensus 348 ~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~-~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~ 424 (524)
T KOG0601|consen 348 CEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKL-FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVF 424 (524)
T ss_pred hcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchh-hhcccccccceeeccchhhhhccccccccccceecccc
Confidence 99998876663 4456888899999999999999999999 9999999999999876 78899999998653221 122
Q ss_pred c-cccCC-CCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 210 S-TNLAF-TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 210 ~-~t~~y-~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
. ++..| .+|.......+..+.|++|||..+.+.+++.+..+.. ..+..+...... . .......+..+..
T Consensus 425 ~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-------~~~~~i~~~~~p-~-~~~~~~~~q~~~k 495 (524)
T KOG0601|consen 425 HHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-------VQSLTIRSGDTP-N-LPGLKLQLQVLLK 495 (524)
T ss_pred cccccccccchhhccccccccccccccccccccccccCcccCccc-------ccceeeeccccc-C-CCchHHhhhhhhh
Confidence 2 23334 3555555577888999999999999999998643321 111111111111 1 1122367888899
Q ss_pred HhccCCCCCCCCHHHHHHHhchhh
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
.+...++..||.+.++..+.+..+
T Consensus 496 v~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 496 VMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred hhcCCccccchhhhhhcccchhhh
Confidence 999999999999999887765443
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.1e-13 Score=130.76 Aligned_cols=105 Identities=10% Similarity=0.026 Sum_probs=101.0
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
....+.+.++.|+++.+.|.+++|...|.+|++..|. .+.+++|+|.+|.++|++++|+.+|..||.++|.+++||.++
T Consensus 350 ~p~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda~~Nm 428 (966)
T KOG4626|consen 350 CPNHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADALSNM 428 (966)
T ss_pred CCccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHHHHhc
Confidence 3466889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
|..|..+|+.++|+++|.+|+.++|.
T Consensus 429 Gnt~ke~g~v~~A~q~y~rAI~~nPt 454 (966)
T KOG4626|consen 429 GNTYKEMGDVSAAIQCYTRAIQINPT 454 (966)
T ss_pred chHHHHhhhHHHHHHHHHHHHhcCcH
Confidence 99999999999999999999999995
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.3e-13 Score=125.73 Aligned_cols=104 Identities=23% Similarity=0.360 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC---CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM---VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
+.-..|...|+.+|++|+|..|.++|+.||.++|. .++.+|.|||.++..+|+..+|+.+++.|++|+|.+.+||.+
T Consensus 247 k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall~ 326 (486)
T KOG0550|consen 247 KKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALLR 326 (486)
T ss_pred HHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHHHH
Confidence 56688999999999999999999999999999997 234679999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+|.|+..+++|++|+++|++|++++-+
T Consensus 327 ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 327 RANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999988654
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.5e-13 Score=98.00 Aligned_cols=67 Identities=19% Similarity=0.242 Sum_probs=46.3
Q ss_pred chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCC-ChHHHHHHHHHhhcccc
Q 011349 417 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLG-MNNDAQETLKDGTNLEA 483 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~p 483 (488)
++.+|.++|.++...|+|++|+.+|++|++++|+++.+|+++|.++..+| ++++|+++|++|+++||
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 45566666777777777777777777777777777777777777777776 56777777777776666
|
... |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.9e-12 Score=113.13 Aligned_cols=137 Identities=12% Similarity=0.120 Sum_probs=100.9
Q ss_pred cccCCCCCCceEEEEEeCC-------CcEEEEEEccCCCC---------------------CC-hHHH----HHHHHHHh
Q 011349 59 VSEHGEKAPNVVYKGLVDE-------DRWIAVKRFNRSAW---------------------PD-SRQF----LEEARAVG 105 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~---------------------~~-~~~~----~~E~~~l~ 105 (488)
.+.||.|--+.||.|...+ +..+|||+.+.+.. .+ ...+ .+|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3567999999999998443 47899998753210 01 1122 38999999
Q ss_pred hcCC--CCCcccccceecCCeeeEEEecCCCCChhh-hhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCcccccccC
Q 011349 106 LLRS--ERLVNLIGCCCEGEERLLVAEFMPNETLSK-HLFHWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYHDLNT 181 (488)
Q Consensus 106 ~l~h--~niv~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~iiH~Dlkp 181 (488)
++.. -+++..+++ ..-+|||||+.+..+.. .+ ....++..+...+..+++.+|..| |..+ +||+||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L---kd~~~~~~~~~~i~~~i~~~l~~l~H~~g-lVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL---KDAKLNDEEMKNAYYQVLSMMKQLYKECN-LVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh---hccccCHHHHHHHHHHHHHHHHHHHHhCC-eecCCCCH
Confidence 9953 567777764 45689999997643422 22 223456667778899999999999 8888 99999999
Q ss_pred CceeecCCCCCeeccCCCcccCC
Q 011349 182 YRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 182 ~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.|||++ ++.+.|+|||.+-...
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCC
Confidence 999997 4689999999876554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.3e-12 Score=136.67 Aligned_cols=104 Identities=26% Similarity=0.369 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
+...+..++++|+.+++.|+|++|+..|+++|++.|+ +..|.|+|.||.++|++++|++++++|++++|++.++|+++
T Consensus 123 ~~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~ 200 (615)
T TIGR00990 123 RKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRR 200 (615)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 3456788999999999999999999999999999995 56899999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
|.+|..+|++++|+.+|..++.+++.
T Consensus 201 a~a~~~lg~~~eA~~~~~~~~~~~~~ 226 (615)
T TIGR00990 201 ANAYDGLGKYADALLDLTASCIIDGF 226 (615)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999888766553
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.1e-13 Score=97.44 Aligned_cols=67 Identities=21% Similarity=0.262 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC-CHHHHHHHHHHHHHhCC
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-MPQEALGDAMQAQVISP 449 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~l~p 449 (488)
+|..|+.+|..++..|+|++|+..|++||+++|+ ++.+|+++|.||..+| ++++|++++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 5789999999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.36 E-value=7e-12 Score=102.86 Aligned_cols=103 Identities=17% Similarity=0.155 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC---HHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---PTAFY 456 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~ 456 (488)
+..++..|..+++.|+|++|++.|+++++.+|+ + +.+++.+|.++.+.|++++|+..+++++..+|++ +.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (119)
T TIGR02795 2 EEAYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALL 80 (119)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHH
Confidence 467899999999999999999999999999987 4 5688899999999999999999999999999986 67899
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|.++..+|++++|+..|+++++..|+..
T Consensus 81 ~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 110 (119)
T TIGR02795 81 KLGMSLQELGDKEKAKATLQQVIKRYPGSS 110 (119)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHCcCCh
Confidence 999999999999999999999999999864
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.9e-12 Score=113.02 Aligned_cols=99 Identities=22% Similarity=0.332 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..+.++|+.+|..++|..|+.+|.+||.++|. .+.+|.|+|.||+++++++.+..++.+|++++|+.++++|.+|.+
T Consensus 9 ~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~~ 87 (284)
T KOG4642|consen 9 SAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQW 87 (284)
T ss_pred HHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcc
Q 011349 462 LFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l 481 (488)
+.....|++|+..+.+|..+
T Consensus 88 ~l~s~~~~eaI~~Lqra~sl 107 (284)
T KOG4642|consen 88 LLQSKGYDEAIKVLQRAYSL 107 (284)
T ss_pred HHhhccccHHHHHHHHHHHH
Confidence 99999999999999999655
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.2e-12 Score=117.13 Aligned_cols=107 Identities=17% Similarity=0.226 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
....+++..++.|..++..|+|..|+..|-.||+.+|+ +..+++.||.+|+.+|+-..|+.+++++|++.|++.-|...
T Consensus 33 ~~~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQ 111 (504)
T KOG0624|consen 33 ASPADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQ 111 (504)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHH
Confidence 44577888999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|.++.++|++++|.++|+.+|+.+|.+
T Consensus 112 Rg~vllK~Gele~A~~DF~~vl~~~~s~ 139 (504)
T KOG0624|consen 112 RGVVLLKQGELEQAEADFDQVLQHEPSN 139 (504)
T ss_pred hchhhhhcccHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999964
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.4e-12 Score=127.37 Aligned_cols=104 Identities=14% Similarity=0.189 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++....-+|..|+-.|+|++|+.+|+.||..+|+ +..+|+.+|..+..-.+.++||..|.+|++|.|++.+++|++|.
T Consensus 428 ~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgI 506 (579)
T KOG1125|consen 428 IDPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGI 506 (579)
T ss_pred CChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhh
Confidence 45667778999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+++.+|.|+||.+.|-.||.+.++.
T Consensus 507 S~mNlG~ykEA~~hlL~AL~mq~ks 531 (579)
T KOG1125|consen 507 SCMNLGAYKEAVKHLLEALSMQRKS 531 (579)
T ss_pred hhhhhhhHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999998873
|
|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.5e-12 Score=117.49 Aligned_cols=106 Identities=21% Similarity=0.308 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc---CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG---GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
-+.|..+++.||.+|+.++|..|+++|+++|.. ||+.++.+|+|||.|.+-+|+|..||.|+.+|++++|.+.+||+
T Consensus 78 ~E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~ 157 (390)
T KOG0551|consen 78 HEQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYI 157 (390)
T ss_pred HHHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhh
Confidence 357889999999999999999999999999964 67777899999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+-|.|++.+.++++|....+..+.+|-+.
T Consensus 158 R~Akc~~eLe~~~~a~nw~ee~~~~d~e~ 186 (390)
T KOG0551|consen 158 RGAKCLLELERFAEAVNWCEEGLQIDDEA 186 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhHHH
Confidence 99999999999999999999888876553
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.1e-11 Score=108.14 Aligned_cols=102 Identities=16% Similarity=0.064 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh--CCCCHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI--SPDWPTAFYLQAA 460 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l--~p~~~~a~~~~g~ 460 (488)
..+|.-+|..|...|+.+.|-+.|++|+.++|+ +..+++|-|.-+...|+|++|...|++|+.. .|.-++.|-|+|.
T Consensus 69 ~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~eN~G~ 147 (250)
T COG3063 69 YLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLENLGL 147 (250)
T ss_pred HHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhhhhHH
Confidence 444555555555555555555555555555555 5555555555555555555555555555543 2333445555555
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
|-.++|+++.|.++|+++|++||++
T Consensus 148 Cal~~gq~~~A~~~l~raL~~dp~~ 172 (250)
T COG3063 148 CALKAGQFDQAEEYLKRALELDPQF 172 (250)
T ss_pred HHhhcCCchhHHHHHHHHHHhCcCC
Confidence 5555555555555555555555543
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.4e-13 Score=127.28 Aligned_cols=104 Identities=24% Similarity=0.314 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.|..+.++|+.++..++|+.|+..|.|||+++|+ .+.+|.+|+.++++.++|..|+.|+.+||+++|.+.++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
...++++.+|+.+|+.+..+.|+++
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~ 106 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDP 106 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcH
Confidence 9999999999999999999999865
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-12 Score=129.73 Aligned_cols=105 Identities=13% Similarity=0.098 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+++|...||++--+++++.||++|++||++||+ .+-+|..+|.=+.....|+.|..+|..||.++|.+..|||.+|.
T Consensus 419 ~sPesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwYGlG~ 497 (638)
T KOG1126|consen 419 NSPESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWYGLGT 497 (638)
T ss_pred CCcHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHHhhhh
Confidence 55789999999999999999999999999999998 88888888888888888999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|.++++++.|.-.|++|++++|.+.
T Consensus 498 vy~Kqek~e~Ae~~fqkA~~INP~ns 523 (638)
T KOG1126|consen 498 VYLKQEKLEFAEFHFQKAVEINPSNS 523 (638)
T ss_pred heeccchhhHHHHHHHhhhcCCccch
Confidence 99999999999999999999888753
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-11 Score=95.76 Aligned_cols=99 Identities=21% Similarity=0.320 Sum_probs=94.9
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 011349 385 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 464 (488)
Q Consensus 385 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 464 (488)
.++.+|..++..|++++|+..|+++++..|. +..++..+|.++...+++++|+..+++++++.|.+..+++.+|.++..
T Consensus 2 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (100)
T cd00189 2 ALLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYK 80 (100)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 5788999999999999999999999999999 888999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhccccc
Q 011349 465 LGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 465 ~~~~~~A~~~~~~al~l~p~ 484 (488)
+|++++|...++++++++|+
T Consensus 81 ~~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 81 LGKYEEALEAYEKALELDPN 100 (100)
T ss_pred HHhHHHHHHHHHHHHccCCC
Confidence 99999999999999999884
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.9e-11 Score=107.50 Aligned_cols=107 Identities=19% Similarity=0.183 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
....+..++.+|..+...|++++|+..|+++++..|+. ...++.++|.++..+|++++|+..+++++++.|++..+++
T Consensus 31 ~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 110 (172)
T PRK02603 31 KAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALN 110 (172)
T ss_pred HhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 44667889999999999999999999999999887651 2468999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCC--------------hHHHHHHHHHhhcccccc
Q 011349 457 LQAAALFGLGM--------------NNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 457 ~~g~~~~~~~~--------------~~~A~~~~~~al~l~p~~ 485 (488)
.+|.++..+|+ +++|++.++++++++|++
T Consensus 111 ~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~ 153 (172)
T PRK02603 111 NIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNN 153 (172)
T ss_pred HHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchh
Confidence 99999999998 788999999999999975
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-11 Score=131.04 Aligned_cols=101 Identities=14% Similarity=0.119 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..|..+|..++..|+|++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+.+|+++++++|++..+|+++|.++
T Consensus 365 ~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~kal~l~P~~~~~~~~la~~~ 443 (615)
T TIGR00990 365 TQSYIKRASMNLELGDPDKAEEDFDKALKLNSE-DPDIYYHRAQLHFIKGEFAQAGKDYQKSIDLDPDFIFSHIQLGVTQ 443 (615)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCccCHHHHHHHHHHH
Confidence 344555555555555555555555555555555 5555555555555555555555555555555555555555555555
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+.+|++++|+..|+++++++|+
T Consensus 444 ~~~g~~~eA~~~~~~al~~~P~ 465 (615)
T TIGR00990 444 YKEGSIASSMATFRRCKKNFPE 465 (615)
T ss_pred HHCCCHHHHHHHHHHHHHhCCC
Confidence 5555555555555555555554
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.5e-11 Score=112.93 Aligned_cols=140 Identities=17% Similarity=0.172 Sum_probs=109.9
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCC--CCCcccccceecC---CeeeEEEecCC
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRS--ERLVNLIGCCCEG---EERLLVAEFMP 133 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~---~~~~lv~e~~~ 133 (488)
+.+|.|..+.||++...+|..+++|....... .....+.+|+++++.+.+ .++++++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 45799999999999976677899999865432 134578999999999975 3467777776653 25689999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------------
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG----------------------------------------- 172 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------------- 172 (488)
|.++.+.+. ...++..+...++.+++++|..||+..
T Consensus 84 G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 998887653 145778888888889999998888420
Q ss_pred --------------CcccccccCCceeecC--CCCCeeccCCCccc
Q 011349 173 --------------RALYHDLNTYRILFDQ--DGNPRLSCFGLMKN 202 (488)
Q Consensus 173 --------------~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~ 202 (488)
.++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1589999999999998 56688999998764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.2e-12 Score=97.20 Aligned_cols=83 Identities=20% Similarity=0.355 Sum_probs=74.9
Q ss_pred hcCChHHHHHHHHHhhccCCCC-chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHH
Q 011349 395 RAKDFPTAIECYTHFIDGGTMV-SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQE 473 (488)
Q Consensus 395 ~~~~~~~A~~~~~~ai~~~p~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~ 473 (488)
++|+|+.|+..|+++++.+|.+ +..+++++|.||+++|+|++|+..+++ ++.+|.++..++.+|.+++.+|+|++|++
T Consensus 1 ~~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~ 79 (84)
T PF12895_consen 1 DQGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIK 79 (84)
T ss_dssp HTT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHH
T ss_pred CCccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 3689999999999999999963 466777899999999999999999999 99999999999999999999999999999
Q ss_pred HHHHh
Q 011349 474 TLKDG 478 (488)
Q Consensus 474 ~~~~a 478 (488)
.|++|
T Consensus 80 ~l~~~ 84 (84)
T PF12895_consen 80 ALEKA 84 (84)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99886
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.6e-11 Score=104.62 Aligned_cols=107 Identities=18% Similarity=0.106 Sum_probs=93.7
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC--CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM--VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
....+..++..|..+...|+|++|+..|++|+.+.|+ +.+.++.++|.+|...|++++|+..+++|++++|.+..++.
T Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~ 110 (168)
T CHL00033 31 GEKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALN 110 (168)
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 3456889999999999999999999999999988665 13458999999999999999999999999999999999999
Q ss_pred HHHHHHH-------hCCChH-------HHHHHHHHhhcccccc
Q 011349 457 LQAAALF-------GLGMNN-------DAQETLKDGTNLEAKK 485 (488)
Q Consensus 457 ~~g~~~~-------~~~~~~-------~A~~~~~~al~l~p~~ 485 (488)
++|.++. .+|+++ +|+..|++++.++|++
T Consensus 111 ~la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~ 153 (168)
T CHL00033 111 NMAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGN 153 (168)
T ss_pred HHHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 9999999 777866 6666777788888864
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-12 Score=134.61 Aligned_cols=242 Identities=18% Similarity=0.131 Sum_probs=171.2
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+....+++.+-+|+++.++.+. --.|...++|+..... ..+.+...++-.++-..++|-+++...-+......+||
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 3334566677899999999877 3335444555443221 12223333333344344567777666656667789999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 205 (488)
++|..|++|...++ ..+..+..-....+..+..++.+||+.. ++|+|++|.|+++..+++.++.|||.......
T Consensus 883 ~~~~~~~~~~Skl~--~~~~~saepaRs~i~~~vqs~e~L~s~~-r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLH--NSGCLSAEPARSPILERVQSLESLHSSL-RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hHHhccCCchhhhh--cCCCcccccccchhHHHHhhhhccccch-hhcccccccchhhcccCCcccCccccccccccccC
Confidence 99999999999886 3445666667777888899999999998 99999999999999999999999984332110
Q ss_pred --------------------------------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcch
Q 011349 206 --------------------------------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHA 253 (488)
Q Consensus 206 --------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~ 253 (488)
.....+|+.|.+||...+......+|.|++|++++|.++|.+||....
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 001246889999999999999999999999999999999998876553
Q ss_pred hhhhhcccccccccccc-CCCCChhhHHHHHHHHHHhccCCCCCCCCHH
Q 011349 254 LDLIRGKNFLMLMDSCL-EGHFSNDDGTELVRLASRCLQYEPRERPNAK 301 (488)
Q Consensus 254 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 301 (488)
.... +..++.... ...-+...+....+++.+.+..+|.+|..+.
T Consensus 1040 pq~~----f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1040 PQQI----FENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhh----hhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 3222 222222111 1222334567889999999999999997655
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.1e-11 Score=93.07 Aligned_cols=102 Identities=20% Similarity=0.193 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----HHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW----PTAF 455 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~----~~a~ 455 (488)
.+....+.-+|..+...|+.+.|++.|.++|.+.|. .+.+|+|||.++...|+.++|+.++++|+++.-+. -.+|
T Consensus 40 ~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa~ 118 (175)
T KOG4555|consen 40 IKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQAF 118 (175)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHHH
Confidence 345567778999999999999999999999999999 99999999999999999999999999999997654 3579
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhccc
Q 011349 456 YLQAAALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 456 ~~~g~~~~~~~~~~~A~~~~~~al~l~ 482 (488)
..+|..|..+|+.+.|..+|+.|.++-
T Consensus 119 vQRg~lyRl~g~dd~AR~DFe~AA~LG 145 (175)
T KOG4555|consen 119 VQRGLLYRLLGNDDAARADFEAAAQLG 145 (175)
T ss_pred HHHHHHHHHhCchHHHHHhHHHHHHhC
Confidence 999999999999999999999998764
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4e-11 Score=102.12 Aligned_cols=131 Identities=20% Similarity=0.149 Sum_probs=97.9
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEEEccCCC--CCC------hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 61 EHGEKAPNVVYKGLVDEDRWIAVKRFNRSA--WPD------SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+++|+-+.+|.+.+. |..+.+|.=.+.. .+. .+.-.+|++++.+++--.|..-.=+..+...-.|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 4589999999999763 4446666432221 111 134678999999997555554444555677788999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
+|..|.+.+... ...++..|-.-+.-||..| |+|+||.++||+++.++ +.++||||+...
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g-ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKAG-IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC-eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 999999888531 2567778888888999999 99999999999998665 999999998743
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.1e-11 Score=131.50 Aligned_cols=103 Identities=12% Similarity=-0.080 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..+...|.++.+.|++++|+..|+++++++|+ ++.+++++|.++...|++++|++.|++|++++|+++.+++++|.++
T Consensus 609 ~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~al 687 (987)
T PRK09782 609 ANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYVN 687 (987)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 678899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+|++++|+++|++|++++|+..
T Consensus 688 ~~lGd~~eA~~~l~~Al~l~P~~a 711 (987)
T PRK09782 688 QRLDDMAATQHYARLVIDDIDNQA 711 (987)
T ss_pred HHCCCHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999864
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.8e-11 Score=113.80 Aligned_cols=97 Identities=14% Similarity=0.038 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++.+|..+|..+...|+|++|+..|+++++++|+ +..+|.++|.++...|++++|+++++++++++|+++...+.. .
T Consensus 96 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~g~~~eA~~~~~~al~~~P~~~~~~~~~-~ 173 (296)
T PRK11189 96 DMADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAYLNRGIALYYGGRYELAQDDLLAFYQDDPNDPYRALWL-Y 173 (296)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHH-H
Confidence 45678888888888888888888888888888888 888888888888888888888888888888777765211111 1
Q ss_pred HHHhCCChHHHHHHHHHhh
Q 011349 461 ALFGLGMNNDAQETLKDGT 479 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al 479 (488)
.+...+++++|++.|++++
T Consensus 174 l~~~~~~~~~A~~~l~~~~ 192 (296)
T PRK11189 174 LAESKLDPKQAKENLKQRY 192 (296)
T ss_pred HHHccCCHHHHHHHHHHHH
Confidence 1223445555555554443
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.8e-11 Score=100.19 Aligned_cols=144 Identities=19% Similarity=0.184 Sum_probs=103.9
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEE-ccCCC-CC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKR-FNRSA-WP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~-~~~~~-~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+..+-+|+-+.|+++.+ .|+.+.||. +.+.- .+ ...+..+|+++|.+++--.|.--.=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 345568899999999987 566667774 32211 11 1346788999999997545443333455566668999
Q ss_pred ecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeeccCCCcccC
Q 011349 130 EFMPN-ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGLMKNS 203 (488)
Q Consensus 130 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla~~~ 203 (488)
||++| .++.+++...............++..|-+.+.-||..+ +||+||..+||++..++ .+.++|||++...
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd-iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND-IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC-eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 99986 48888886544444444445788999999999999999 99999999999996554 3589999997543
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.5e-11 Score=124.67 Aligned_cols=99 Identities=9% Similarity=-0.077 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++.++..+|..+...|++++|+..|++|++++|+ ++.+++++|.++..+|++++|+..++++++++|+++.+++.++.+
T Consensus 337 ~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~~~~ 415 (553)
T PRK12370 337 NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWI 415 (553)
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHHHHH
Confidence 3444445555555555555555555555555555 555555555555555555555555555555555555444444444
Q ss_pred HHhCCChHHHHHHHHHhhcc
Q 011349 462 LFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l 481 (488)
++.+|++++|++.++++++.
T Consensus 416 ~~~~g~~eeA~~~~~~~l~~ 435 (553)
T PRK12370 416 TYYHTGIDDAIRLGDELRSQ 435 (553)
T ss_pred HHhccCHHHHHHHHHHHHHh
Confidence 44455555555555555444
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.24 E-value=8e-11 Score=112.81 Aligned_cols=102 Identities=18% Similarity=0.234 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+.++.-+|.-+|-.|++..|-+.|+++|+++|. +...|..||.+|+...+-++-..+|.+|..+||+|++.||.+|..+
T Consensus 326 A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm~ 404 (606)
T KOG0547|consen 326 AEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQMR 404 (606)
T ss_pred HHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHHH
Confidence 778888899999999999999999999999998 7777889999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhcccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+-+++|++|+++|++|+.|+|++
T Consensus 405 flL~q~e~A~aDF~Kai~L~pe~ 427 (606)
T KOG0547|consen 405 FLLQQYEEAIADFQKAISLDPEN 427 (606)
T ss_pred HHHHHHHHHHHHHHHHhhcChhh
Confidence 99999999999999999999975
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1e-10 Score=122.67 Aligned_cols=109 Identities=8% Similarity=-0.075 Sum_probs=95.0
Q ss_pred hhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 377 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 377 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
.+.+.++.+++..|.+..+.|.|++|+..+..+++++|+ +..++.+++.++.+++++++|+..+++++..+|+++.+++
T Consensus 80 ~~~~~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~ 158 (694)
T PRK15179 80 RRYPHTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREIL 158 (694)
T ss_pred HhccccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHH
Confidence 455677888888999999999999999999999999998 8888888999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|.++.++|++++|++.|+++++.+|+..
T Consensus 159 ~~a~~l~~~g~~~~A~~~y~~~~~~~p~~~ 188 (694)
T PRK15179 159 LEAKSWDEIGQSEQADACFERLSRQHPEFE 188 (694)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHhcCCCcH
Confidence 999999999999999999999988777643
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=5e-11 Score=101.19 Aligned_cols=85 Identities=15% Similarity=0.042 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++.+|..+|.++...|+|++|+..|+++++++|+ ++.+++++|.|+..+|++++|+..|++|++++|+++.++.++|
T Consensus 55 P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~~~~~ 133 (144)
T PRK15359 55 PWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQ 133 (144)
T ss_pred CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 356789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhC
Q 011349 460 AALFGL 465 (488)
Q Consensus 460 ~~~~~~ 465 (488)
.+...+
T Consensus 134 ~~~~~l 139 (144)
T PRK15359 134 NAQIMV 139 (144)
T ss_pred HHHHHH
Confidence 988765
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.9e-10 Score=108.10 Aligned_cols=107 Identities=9% Similarity=-0.040 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCH--HHHHHHHHHHHHhCCCCHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAK-DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMP--QEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~--~~A~~~~~~al~l~p~~~~a~ 455 (488)
..++..+|..+|.++...| ++++|+..++++++.+|+ +..+|++|+.++.++|+. ++++..++++++++|++..||
T Consensus 67 nP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW 145 (320)
T PLN02789 67 NPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAKNYHAW 145 (320)
T ss_pred CchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHHHH
Confidence 3467889999999999998 689999999999999999 999999999999999874 789999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 456 YLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 456 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+|.++..+|++++|+++++++|++||.+.
T Consensus 146 ~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~ 176 (320)
T PLN02789 146 SHRQWVLRTLGGWEDELEYCHQLLEEDVRNN 176 (320)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHCCCch
Confidence 9999999999999999999999999999863
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.5e-10 Score=120.85 Aligned_cols=103 Identities=13% Similarity=0.002 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC-CCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS-PDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~-p~~~~a~~~~g 459 (488)
+++.+++..|..+...|++++|+..|++|++++|. ++.++..++.+++..|++++|+..++++++.. |+++.+++.+|
T Consensus 370 ~~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~-~~~~~~~~~~~~~~~g~~eeA~~~~~~~l~~~~p~~~~~~~~la 448 (553)
T PRK12370 370 ISADIKYYYGWNLFMAGQLEEALQTINECLKLDPT-RAAAGITKLWITYYHTGIDDAIRLGDELRSQHLQDNPILLSMQV 448 (553)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-ChhhHHHHHHHHHhccCHHHHHHHHHHHHHhccccCHHHHHHHH
Confidence 45678888999999999999999999999999998 77666666767777899999999999998875 78888899999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+|..+|++++|.+.+++.+..+|+
T Consensus 449 ~~l~~~G~~~eA~~~~~~~~~~~~~ 473 (553)
T PRK12370 449 MFLSLKGKHELARKLTKEISTQEIT 473 (553)
T ss_pred HHHHhCCCHHHHHHHHHHhhhccch
Confidence 9999999999999999888777765
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.1e-10 Score=96.14 Aligned_cols=99 Identities=7% Similarity=-0.062 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+..+..|..|..+++.|+|++|...|+-....+|. ++..+..+|.|+..+++|++|+..|..|..++++++...|..|.
T Consensus 35 ~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agq 113 (165)
T PRK15331 35 DMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQ 113 (165)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHH
Confidence 45678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhc
Q 011349 461 ALFGLGMNNDAQETLKDGTN 480 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~ 480 (488)
|+..+|+.++|+.+|..+++
T Consensus 114 C~l~l~~~~~A~~~f~~a~~ 133 (165)
T PRK15331 114 CQLLMRKAAKARQCFELVNE 133 (165)
T ss_pred HHHHhCCHHHHHHHHHHHHh
Confidence 99999999999999999987
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.17 E-value=5e-11 Score=86.33 Aligned_cols=63 Identities=22% Similarity=0.262 Sum_probs=38.5
Q ss_pred cHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 423 RRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 423 ~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+|..+++.|+|++|++.|+++++.+|+++++|+.+|.++..+|++++|++.|+++++++|++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 355566666666666666666666666666666666666666666666666666666666654
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.1e-10 Score=100.24 Aligned_cols=104 Identities=11% Similarity=0.041 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
+...+.+..++|..|++.|++..|.+.+++||+.||+ +..+|.-+|.+|.+.|+.+.|-+.|++|+.++|++.+.++|.
T Consensus 31 ~~~aa~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNY 109 (250)
T COG3063 31 RNEAAKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNY 109 (250)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhh
Confidence 3455678889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
|..++.+|++++|...|++|+. +|.
T Consensus 110 G~FLC~qg~~~eA~q~F~~Al~-~P~ 134 (250)
T COG3063 110 GAFLCAQGRPEEAMQQFERALA-DPA 134 (250)
T ss_pred hHHHHhCCChHHHHHHHHHHHh-CCC
Confidence 9999999999999999999996 554
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.2e-10 Score=109.48 Aligned_cols=216 Identities=19% Similarity=0.162 Sum_probs=156.0
Q ss_pred CCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec----CCeeeEEEecCCC-CChhh
Q 011349 66 APNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLLVAEFMPN-ETLSK 139 (488)
Q Consensus 66 ~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-gsL~~ 139 (488)
.-.+.|++. .-+|..|++|+++............-+++++++.|.|||++.++|.. +..+++|++|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 345789998 55799999999965554444445567889999999999999999874 3468999999986 67776
Q ss_pred hhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 140 HLFHW-------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 140 ~l~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+.... .+...++..+|.++.|+..||.++|+.| +.-+-|.|.+||++.+.+++|+..|........
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG-LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG-LACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC-ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 55421 2334778999999999999999999999 888999999999999999999888876655443
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
.. |.+.+ -.+-|.=.||.+++-|.||..-.. ..+...... ...+....+.++.+++
T Consensus 447 ~~----------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~--~~d~~~~s~---------~~~I~~~yS~D~rn~v 502 (655)
T KOG3741|consen 447 PT----------EPLES---QQQNDLRDLGLLLLALATGTENSN--RTDSTQSSH---------LTRITTTYSTDLRNVV 502 (655)
T ss_pred CC----------cchhH---HhhhhHHHHHHHHHHHhhcccccc--cccchHHHH---------HHHhhhhhhHHHHHHH
Confidence 20 11111 124677789999999999963211 001111100 1122334567888999
Q ss_pred HHhccCCCCCCCCHHHHHHHh
Q 011349 287 SRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l 307 (488)
.......+++ -+..+++.++
T Consensus 503 ~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 503 EYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHHhcCccc-ccHHHHHHHH
Confidence 9999998887 6788887764
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.2e-10 Score=106.24 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch---HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH---H
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP---TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT---A 454 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~---a 454 (488)
..+..++.+|..++..|+|++|+..|+++++.+|. ++ .+++.+|.+|.+.|++++|+..|+++++.+|+++. +
T Consensus 31 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 109 (235)
T TIGR03302 31 WPAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYA 109 (235)
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHH
Confidence 44678999999999999999999999999999998 54 57899999999999999999999999999999887 7
Q ss_pred HHHHHHHHHhC--------CChHHHHHHHHHhhccccccc
Q 011349 455 FYLQAAALFGL--------GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 455 ~~~~g~~~~~~--------~~~~~A~~~~~~al~l~p~~~ 486 (488)
++.+|.+++.+ |++++|++.|+++++.+|+..
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 149 (235)
T TIGR03302 110 YYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSE 149 (235)
T ss_pred HHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCCh
Confidence 99999999987 899999999999999999864
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.5e-10 Score=83.73 Aligned_cols=65 Identities=18% Similarity=0.206 Sum_probs=60.9
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH
Q 011349 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 387 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 452 (488)
+.+|..+++.|+|++|+..|+++++.+|+ ++.+++.+|.++..+|++++|+..|+++++++|+++
T Consensus 1 ~~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 1 YALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred ChHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 46899999999999999999999999999 999999999999999999999999999999999985
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.1e-10 Score=101.08 Aligned_cols=126 Identities=17% Similarity=0.158 Sum_probs=85.2
Q ss_pred eEEEEEeCCCcEEEEEEccCCCCC---------------------C-----hHHHHHHHHHHhhcCCC--CCccccccee
Q 011349 69 VVYKGLVDEDRWIAVKRFNRSAWP---------------------D-----SRQFLEEARAVGLLRSE--RLVNLIGCCC 120 (488)
Q Consensus 69 ~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~--niv~~~~~~~ 120 (488)
.||.|...+|..||||+.+..... . .....+|.+.|.++..- ++++++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 389999888999999987543211 0 12467899999999755 567776542
Q ss_pred cCCeeeEEEecCC--CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHH-HHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 121 EGEERLLVAEFMP--NETLSKHLFHWENQPMKWAMRVRVALYLAQALDY-CSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 121 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
.-.|||||++ |..+..+.. ..++......++.+++..+.. +|..| ++|+||.+.|||++++ .+.++||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~----~~~~~~~~~~~~~~il~~~~~~~~~~g-ivHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKD----VDLSPEEPKELLEEILEEIIKMLHKAG-IVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHH----CGGGGSTHHHHHHHHHHHHHHHHHCTT-EEESS-STTSEEEETT-CEEE--G
T ss_pred ---CCEEEEEecCCCccchhhHHh----ccccchhHHHHHHHHHHHHHHHHHhcC-ceecCCChhhEEeecc-eEEEEec
Confidence 3479999998 666654432 122245567778888886655 57888 9999999999999977 9999999
Q ss_pred CCcccCC
Q 011349 198 GLMKNSR 204 (488)
Q Consensus 198 gla~~~~ 204 (488)
|.+....
T Consensus 151 ~qav~~~ 157 (188)
T PF01163_consen 151 GQAVDSS 157 (188)
T ss_dssp TTEEETT
T ss_pred CcceecC
Confidence 9887654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-10 Score=115.25 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+.-.+||..|.+|.++++|+.|+-.|++|++++|. +.++....|..+.++|+.++|+..|++|+.++|.++-..|.+|.
T Consensus 487 rhYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~-nsvi~~~~g~~~~~~k~~d~AL~~~~~A~~ld~kn~l~~~~~~~ 565 (638)
T KOG1126|consen 487 RHYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPS-NSVILCHIGRIQHQLKRKDKALQLYEKAIHLDPKNPLCKYHRAS 565 (638)
T ss_pred hhhHHHHhhhhheeccchhhHHHHHHHhhhcCCcc-chhHHhhhhHHHHHhhhhhHHHHHHHHHHhcCCCCchhHHHHHH
Confidence 66789999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+++.+++|++|+..+++.-++.|+.
T Consensus 566 il~~~~~~~eal~~LEeLk~~vP~e 590 (638)
T KOG1126|consen 566 ILFSLGRYVEALQELEELKELVPQE 590 (638)
T ss_pred HHHhhcchHHHHHHHHHHHHhCcch
Confidence 9999999999999999998888874
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.9e-10 Score=105.41 Aligned_cols=132 Identities=11% Similarity=0.065 Sum_probs=98.7
Q ss_pred eEEEEEeCCCcEEEEEEccCCCCC-----------ChHHHHHHHHHHhhcCCCCCc--ccccceec-----CCeeeEEEe
Q 011349 69 VVYKGLVDEDRWIAVKRFNRSAWP-----------DSRQFLEEARAVGLLRSERLV--NLIGCCCE-----GEERLLVAE 130 (488)
Q Consensus 69 ~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv--~~~~~~~~-----~~~~~lv~e 130 (488)
.|+++.+ +|+.|.||........ ....+.+|...+.++...+|. ..++++.. ...-+||||
T Consensus 37 rvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 37 RTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred eEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 4667666 6778999977543311 112488999999999655544 44555533 234789999
Q ss_pred cCCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-------CCCCeeccCCCccc
Q 011349 131 FMPNE-TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-------DGNPRLSCFGLMKN 202 (488)
Q Consensus 131 ~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-------~~~~kl~Dfgla~~ 202 (488)
++++. +|.+++......+.+...+..++.+++..+.-||..| |+|+|++++|||++. ++.+.|+||+.++.
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G-i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG-INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc-CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 99875 8988885333345667788899999999999999999 999999999999975 46789999998753
|
|
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.2e-10 Score=100.52 Aligned_cols=104 Identities=15% Similarity=0.020 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..+...+..+|..+++.|+|.+|+..+.+|..++|+ ++.+|+.+|.+|.++|++++|-..|.+|+++.|+.+.+..|+|
T Consensus 97 ~~d~~ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~nNlg 175 (257)
T COG5010 97 PKDRELLAAQGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIANNLG 175 (257)
T ss_pred cccHHHHHHHHHHHHHhcchHHHHHHHHHHhccCCC-ChhhhhHHHHHHHHccChhHHHHHHHHHHHhccCCchhhhhHH
Confidence 355566667999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
..|+-.|+++.|...+..+...-+.
T Consensus 176 ms~~L~gd~~~A~~lll~a~l~~~a 200 (257)
T COG5010 176 MSLLLRGDLEDAETLLLPAYLSPAA 200 (257)
T ss_pred HHHHHcCCHHHHHHHHHHHHhCCCC
Confidence 9999999999999999998765553
|
|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.7e-10 Score=103.04 Aligned_cols=104 Identities=10% Similarity=0.026 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC--CCCHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS--PDWPTAFYLQ 458 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~--p~~~~a~~~~ 458 (488)
..+..+...|..++..|++++|++.|+++++.+|. +..++.++|.++...|++++|+..++++++.. |.....++++
T Consensus 63 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l 141 (234)
T TIGR02521 63 DDYLAYLALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSLENA 141 (234)
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHHHHH
Confidence 45678888999999999999999999999999998 88888999999999999999999999999864 5667889999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
|.++..+|++++|.+.|+++++.+|+.
T Consensus 142 ~~~~~~~g~~~~A~~~~~~~~~~~~~~ 168 (234)
T TIGR02521 142 GLCALKAGDFDKAEKYLTRALQIDPQR 168 (234)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 999999999999999999999998874
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.3e-10 Score=101.45 Aligned_cols=91 Identities=15% Similarity=0.148 Sum_probs=85.9
Q ss_pred hcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HhCCC--hHHH
Q 011349 395 RAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL-FGLGM--NNDA 471 (488)
Q Consensus 395 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~-~~~~~--~~~A 471 (488)
..++.++++..++++++.+|+ +...|.++|.+|..+|++++|+..|++|++++|+++.+++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 368889999999999999999 9999999999999999999999999999999999999999999986 67787 5999
Q ss_pred HHHHHHhhccccccc
Q 011349 472 QETLKDGTNLEAKKH 486 (488)
Q Consensus 472 ~~~~~~al~l~p~~~ 486 (488)
.+.++++++++|++.
T Consensus 130 ~~~l~~al~~dP~~~ 144 (198)
T PRK10370 130 REMIDKALALDANEV 144 (198)
T ss_pred HHHHHHHHHhCCCCh
Confidence 999999999999864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 488 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 4e-22 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 6e-22 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-18 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-18 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 2e-18 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 3e-17 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 1e-16 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-16 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-10 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-10 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 3e-10 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 5e-10 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 7e-10 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 8e-10 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 8e-10 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 8e-10 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 1e-09 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 1e-09 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 1e-09 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-09 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 1e-09 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 1e-09 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 1e-09 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 2e-09 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-09 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-09 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-09 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-09 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-09 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-09 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 2e-09 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 2e-09 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 3e-09 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 3e-09 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 3e-09 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 3e-09 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 4e-09 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 4e-09 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 4e-09 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 5e-09 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 5e-09 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 5e-09 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 6e-09 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 6e-09 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 1e-08 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 1e-08 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 1e-08 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 1e-08 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-08 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-08 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-08 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 2e-08 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-08 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 2e-08 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-08 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-08 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 2e-08 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-08 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-08 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 2e-08 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-08 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 3e-08 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 3e-08 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 3e-08 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 3e-08 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 3e-08 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 3e-08 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 3e-08 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 3e-08 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-08 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 3e-08 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 4e-08 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 4e-08 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 5e-08 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 5e-08 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 5e-08 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 6e-08 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-08 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 8e-08 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 8e-08 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 9e-08 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 1e-07 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 1e-07 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 1e-07 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 1e-07 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 1e-07 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 1e-07 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 1e-07 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 1e-07 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 1e-07 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-07 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 2e-07 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 2e-07 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 2e-07 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 2e-07 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-07 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-07 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-07 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-07 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 2e-07 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-07 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 2e-07 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 2e-07 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-07 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 2e-07 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-07 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-07 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-07 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 2e-07 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 3e-07 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 3e-07 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 3e-07 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 3e-07 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 3e-07 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-07 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 3e-07 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 3e-07 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 3e-07 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 3e-07 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 3e-07 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 3e-07 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 3e-07 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 3e-07 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 4e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 4e-07 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 4e-07 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 4e-07 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 4e-07 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 4e-07 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 5e-07 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 5e-07 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 6e-07 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 6e-07 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 6e-07 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 7e-07 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 7e-07 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 8e-07 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 1e-06 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 1e-06 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 1e-06 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 1e-06 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 1e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 1e-06 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 1e-06 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 1e-06 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-06 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 1e-06 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 1e-06 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 1e-06 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 1e-06 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 2e-06 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 2e-06 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-06 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-06 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 2e-06 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 2e-06 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-06 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-06 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 3e-06 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 3e-06 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 3e-06 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 4e-06 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 4e-06 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 4e-06 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 4e-06 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 4e-06 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 4e-06 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 4e-06 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 4e-06 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 4e-06 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 5e-06 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 5e-06 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 5e-06 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 5e-06 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 7e-06 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 9e-06 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 9e-06 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 1e-05 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 1e-05 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-05 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-05 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-05 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-05 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-05 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 2e-05 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 2e-05 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 2e-05 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 2e-05 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 2e-05 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 2e-05 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 2e-05 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-05 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-05 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 2e-05 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 2e-05 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 2e-05 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-05 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 2e-05 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 2e-05 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 2e-05 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 2e-05 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-05 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-05 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 3e-05 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 4e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 4e-05 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 4e-05 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 4e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 5e-05 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 5e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 5e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 5e-05 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 5e-05 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 5e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 5e-05 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 5e-05 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 5e-05 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-05 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 6e-05 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 6e-05 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 6e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 6e-05 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 6e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 6e-05 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 6e-05 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 6e-05 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 7e-05 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 7e-05 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 7e-05 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 7e-05 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 8e-05 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 8e-05 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 8e-05 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 9e-05 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 9e-05 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 9e-05 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 1e-04 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 1e-04 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 1e-04 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 1e-04 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-04 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 1e-04 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 1e-04 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 1e-04 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-04 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-04 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 2e-04 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 2e-04 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 2e-04 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 2e-04 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 2e-04 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 2e-04 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 2e-04 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-04 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-04 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 3e-04 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 3e-04 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-04 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 3e-04 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 3e-04 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 3e-04 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 3e-04 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 4e-04 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 4e-04 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 4e-04 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 4e-04 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 5e-04 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 5e-04 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 5e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 5e-04 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 7e-04 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 8e-04 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 198 bits (507), Expect = 3e-60
Identities = 80/319 (25%), Positives = 142/319 (44%), Gaps = 44/319 (13%)
Query: 23 ESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVSEH---GEKAPNVVYKGLVDEDR 79
E+ LE T F F+ +L+ T+ F I GE VVYKG V+ +
Sbjct: 1 ENKSLEVSDTR----FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NT 55
Query: 80 WIAVKRFNRSAWPDS----RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNE 135
+AVK+ + +QF +E + + + E LV L+G +G++ LV +MPN
Sbjct: 56 TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115
Query: 136 TLSKHLFHWENQ-PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR------ILFDQ 188
+L L + P+ W MR ++A A +++ L+ + + +R IL D+
Sbjct: 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDE 168
Query: 189 DGNPRLSCFGLMK-NSRDGKSY-STNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDL 242
++S FGL + + + ++ ++ + T PE L G + P+S +YSFG +LL++
Sbjct: 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEI 227
Query: 243 LSGK-----HIPPSHALD-----LIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292
++G H P LD K +D + + + +AS+CL
Sbjct: 228 ITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHE 286
Query: 293 EPRERPNAKSLVASLTPLQ 311
+ +RP+ K + L +
Sbjct: 287 KKNKRPDIKKVQQLLQEMT 305
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 188 bits (480), Expect = 5e-56
Identities = 74/313 (23%), Positives = 132/313 (42%), Gaps = 24/313 (7%)
Query: 15 SNLKSNLHESSDLENGSTDALPGF-REFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKG 73
+ S S + S+ +P L L AT+ F ++ G VYKG
Sbjct: 2 GSKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLI---GHGVFGKVYKG 58
Query: 74 LVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133
++ + +A+KR + +F E + R LV+LIG C E E +L+ ++M
Sbjct: 59 VLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118
Query: 134 NETLSKHLF--HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191
N L +HL+ M W R+ + + A+ L Y ++ D+ + IL D++
Sbjct: 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL-HTRAIIHRDVKSINILLDENFV 177
Query: 192 PRLSCFGLMK-NSRDGKSY-STNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSG 245
P+++ FG+ K + +++ ST + T PEY GR+ +S VYSFG +L ++L
Sbjct: 178 PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
Query: 246 K----HIPPSH-------ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294
+ P A++ ++D L + + A +CL
Sbjct: 238 RSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSS 297
Query: 295 RERPNAKSLVASL 307
+RP+ ++ L
Sbjct: 298 EDRPSMGDVLWKL 310
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 7e-56
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 40/300 (13%)
Query: 39 REFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNR-SAWPDSRQF 97
+ F+L +L+ A+ F NI+ G VYKG + + +AVKR QF
Sbjct: 18 KRFSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQF 74
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF--HWENQPMKWAMRV 155
E + + L+ L G C ERLLV +M N +++ L P+ W R
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 134
Query: 156 RVALYLAQALDYCSSKGRALYHDLN---TYR------ILFDQDGNPRLSCFGLMKNSRDG 206
R+AL A+ L Y L+ + +R IL D++ + FGL K
Sbjct: 135 RIALGSARGLAY-------LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187
Query: 207 KSY-STNLAFT----PPEYLRTGRVIPESVVYSFGTLLLDLLSGK-----HIPP------ 250
++ +T + T PEYL TG+ ++ V+ +G +LL+L++G+
Sbjct: 188 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 251 --SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308
L++ K L+D L+G++ +++ +L+++A C Q P ERP +V L
Sbjct: 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 7e-28
Identities = 53/321 (16%), Positives = 99/321 (30%), Gaps = 53/321 (16%)
Query: 39 REFNLDQLRAATSGFCADNIVSE--HGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQ 96
+ + L + + + G V+K + + +AVK F S Q
Sbjct: 12 VDLGTENLYFQSMPLQLLEVKARGRFGC-----VWKAQLLNEY-VAVKIFPIQDK-QSWQ 64
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGE----ERLLVAEFMPNETLSKHLFHWENQPMKWA 152
E ++ ++ E ++ IG G + L+ F +LS L + W
Sbjct: 65 NEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK---ANVVSWN 121
Query: 153 MRVRVALYLAQALDYCSSKGRALY--------H-DLNTYRILFDQDGNPRLSCFGLMKNS 203
+A +A+ L Y L H D+ + +L + ++ FGL
Sbjct: 122 ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181
Query: 204 RDGKSYSTNLAFT------PPEYLRTGRVIPESV-----VYSFGTLLLDLLSGK------ 246
GKS PE L +Y+ G +L +L S
Sbjct: 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
Query: 247 ----------HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT-ELVRLASRCLQYEPR 295
I +L+ ++ L ++ G L C ++
Sbjct: 242 VDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAE 301
Query: 296 ERPNAKSLVASLTPLQKEAEV 316
R +A + +T +Q+ +
Sbjct: 302 ARLSAGCVGERITQMQRLTNI 322
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-26
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 26/260 (10%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
VYKG D +AVK N +A + F E + R ++ +G + +
Sbjct: 40 VYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAI 96
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILF 186
V ++ +L HL H + + +A A+ +DY +K + H DL + I
Sbjct: 97 VTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFL 153
Query: 187 DQDGNPRLSCFGL--MKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV---VYSFGT 237
+D ++ FGL K+ G L+ + PE +R P S VY+FG
Sbjct: 154 HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213
Query: 238 LLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293
+L +L++G+ +I + + G+ L S ++ + RL + CL+ +
Sbjct: 214 VLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS----KVRSNCPKRMKRLMAECLKKK 269
Query: 294 PRERPNAKSLVASLTPLQKE 313
ERP+ ++A + L +E
Sbjct: 270 RDERPSFPRILAEIEELARE 289
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-25
Identities = 49/262 (18%), Positives = 95/262 (36%), Gaps = 32/262 (12%)
Query: 69 VVYKGLVDEDRW----IAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEG 122
++KG RW I VK W SR F EE + + ++ ++G C
Sbjct: 25 ELWKG-----RWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP 79
Query: 123 EERLL--VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL 179
+ +MP +L L N + + V+ AL +A+ + + + + L
Sbjct: 80 PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHAL 139
Query: 180 NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESV---VYSFG 236
N+ ++ D+D R+S + K S A+ PE L+ ++SF
Sbjct: 140 NSRSVMIDEDMTARISMADV-KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA 198
Query: 237 TLLLDLLSGK----HIPPSHALDLIRGKNF-LMLMDSCLEGHFSNDDGTELVRLASRCLQ 291
LL +L++ + + + + + + +L C+
Sbjct: 199 VLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP---------HVSKLMKICMN 249
Query: 292 YEPRERPNAKSLVASLTPLQKE 313
+P +RP +V L +Q +
Sbjct: 250 EDPAKRPKFDMIVPILEKMQDK 271
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 7e-24
Identities = 56/263 (21%), Positives = 109/263 (41%), Gaps = 31/263 (11%)
Query: 69 VVYKGLVDEDRW----IAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEG 122
V++ W +AVK + +FL E + LR +V +G +
Sbjct: 52 TVHRA-----EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106
Query: 123 EERLLVAEFMPNETLSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLN 180
+V E++ +L + L + + R+ +A +A+ ++Y ++ + H +L
Sbjct: 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLK 166
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFG 236
+ +L D+ ++ FGL + S + A TP PE LR +S VYSFG
Sbjct: 167 SPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 237 TLLLDLLSGK----HIPPSHALDLIRGKNF-LMLMDSCLEGHFSNDDGTELVRLASRCLQ 291
+L +L + + ++ P+ + + K L + + ++ + C
Sbjct: 227 VILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP---------QVAAIIEGCWT 277
Query: 292 YEPRERPNAKSLVASLTPLQKEA 314
EP +RP+ +++ L PL K A
Sbjct: 278 NEPWKRPSFATIMDLLRPLIKSA 300
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 2e-23
Identities = 50/280 (17%), Positives = 91/280 (32%), Gaps = 49/280 (17%)
Query: 69 VVYKGLVDEDRW---IAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGE 123
VY G RW +A++ + + + F E A R E +V +G C
Sbjct: 48 QVYHG-----RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTY 182
++ TL + + ++A + + + Y +KG + H DL +
Sbjct: 103 HLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSK 159
Query: 183 RILFDQDGNPRLSCFGL--MKNSRDGKSYSTNLAFTP-------PEYLRTGRVIPESV-- 231
+ +D +G ++ FGL + L PE +R E
Sbjct: 160 NVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKL 218
Query: 232 -------VYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLM--DSCLEGHFSNDD 278
V++ GT+ +L + + P + + G + +
Sbjct: 219 PFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM-GTGMKPNLSQIGMGK------- 270
Query: 279 GTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPS 318
E+ + C +E ERP L+ L L K S
Sbjct: 271 --EISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLS 308
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 2e-23
Identities = 56/264 (21%), Positives = 103/264 (39%), Gaps = 41/264 (15%)
Query: 69 VVYKGLVDEDRW----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124
VV K +W +A+K+ + + F+ E R + + +V L G C
Sbjct: 23 VVCKA-----KWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--P 73
Query: 125 RLLVAEFMPNETLSKHLFHWENQP-MKWAMRVRVALYLAQALDYC-SSKGRALYH-DLNT 181
LV E+ +L L E P A + L +Q + Y S + +AL H DL
Sbjct: 74 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP 133
Query: 182 YRILFDQDGN-PRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV-VYSF 235
+L G ++ FG + D +++ TN + PE G E V+S+
Sbjct: 134 PNLLLVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFE-GSNYSEKCDVFSW 189
Query: 236 GTLLLDLLSGK------HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289
G +L ++++ + P + + L+ + + + L +RC
Sbjct: 190 GIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK---------PIESLMTRC 240
Query: 290 LQYEPRERPNAKSLVASLTPLQKE 313
+P +RP+ + +V +T L +
Sbjct: 241 WSKDPSQRPSMEEIVKIMTHLMRY 264
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 1e-21
Identities = 56/270 (20%), Positives = 101/270 (37%), Gaps = 44/270 (16%)
Query: 69 VVYKG-LVDEDRWIAVKRFNRSAWPDS-------RQFLEEARAVGLLRSERLVNLIGCCC 120
+V+KG LV + +A+K ++F E + L +V L G
Sbjct: 34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL 179
+V EF+P L L + P+KW++++R+ L +A ++Y ++ + H DL
Sbjct: 94 NP--PRMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 180 NTYRILFDQDGNPRLSC-----FGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIP-- 228
+ I C FGL S+ + L PE +
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIG-AEEESYT 206
Query: 229 ESV-VYSFGTLLLDLLSGK----HIPPSHA--LDLIRGKNF-LMLMDSCLEGHFSNDDGT 280
E YSF +L +L+G+ +++IR + + + C
Sbjct: 207 EKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP--------- 257
Query: 281 ELVRLASRCLQYEPRERPNAKSLVASLTPL 310
L + C +P++RP+ +V L+ L
Sbjct: 258 RLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 89.9 bits (223), Expect = 6e-20
Identities = 58/334 (17%), Positives = 101/334 (30%), Gaps = 68/334 (20%)
Query: 40 EFNLDQLRAATSGFCADNIVSE--HGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQF 97
E + ++ +G VYKG +D +R +AVK F+ + + + F
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLD-ERPVAVKVFS---FANRQNF 52
Query: 98 LEEAR--AVGLLRSERLVNLIGCCCEGE-----ERLLVAEFMPNETLSKHLFHWENQPMK 150
+ E V L+ + + I E LLV E+ PN +L K+L
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSD 109
Query: 151 WAMRVRVALYLAQALDY-------CSSKGRALYH-DLNTYRILFDQDGNPRLSCFGL--- 199
W R+A + + L Y A+ H DLN+ +L DG +S FGL
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 200 -----MKNSRDGKSYSTNLAFTP----PEYLR-------TGRVIPESVVYSFGTLLLDLL 243
+ + + + + T PE L + + +Y+ G + ++
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
Query: 244 SGKHI-----------PPSHALDLIRGKNFLMLMDSCLEG-------HFSNDDGT--ELV 283
M + E + + L
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK 289
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317
C + R A+ + L E
Sbjct: 290 ETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 9e-20
Identities = 57/270 (21%), Positives = 99/270 (36%), Gaps = 48/270 (17%)
Query: 69 VVYKGLVDEDRW----IAVKRFNRSAWPDS----RQFLEEARAVGLLRSERLVNLIGCCC 120
VY+ W +AVK D +EA+ +L+ ++ L G C
Sbjct: 22 KVYRA-----FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL 76
Query: 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYC-SSKGRALYH-D 178
+ LV EF L++ L + + + V A+ +A+ ++Y + H D
Sbjct: 77 KEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRD 133
Query: 179 LNTYRILFDQDGNPRLSC--------FGLMKNSRD-GKSYSTNLAFTP----PEYLRTGR 225
L + IL Q FGL +R+ ++ + A PE +R
Sbjct: 134 LKSSNILILQKVENGDLSNKILKITDFGL---AREWHRTTKMSAAGAYAWMAPEVIRASM 190
Query: 226 VIPESVVYSFGTLLLDLLSGK----HIPPSHALDLIRGKNF-LMLMDSCLEGHFSNDDGT 280
S V+S+G LL +LL+G+ I + L + +C E
Sbjct: 191 FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPE--------- 241
Query: 281 ELVRLASRCLQYEPRERPNAKSLVASLTPL 310
+L C +P RP+ +++ LT +
Sbjct: 242 PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 1e-19
Identities = 50/266 (18%), Positives = 98/266 (36%), Gaps = 26/266 (9%)
Query: 70 VYKG-LVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
K + + +K R R FL+E + + L ++ IG + + +
Sbjct: 26 AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFD 187
E++ TL + + W+ RV A +A + Y S + H DLN++ L
Sbjct: 86 TEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVR 142
Query: 188 QDGNPRLSCFGL--------------MKNSRDGKSYSTNLAFTP----PEYLRTGRVIPE 229
++ N ++ FGL + + + P PE + +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
Query: 230 SVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289
V+SFG +L +++ + P + L R +F + + L+ + + + RC
Sbjct: 203 VDVFSFGIVLCEIIGRVNADPDY---LPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRC 259
Query: 290 LQYEPRERPNAKSLVASLTPLQKEAE 315
+P +RP+ L L L+
Sbjct: 260 CDLDPEKRPSFVKLEHWLETLRMHLA 285
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 6e-17
Identities = 64/261 (24%), Positives = 105/261 (40%), Gaps = 32/261 (12%)
Query: 70 VYKG-LVDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
V+ G L ++ +AVK + PD + FL+EAR + +V LIG C + + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL---NTYR 183
V E + L E ++ +++ A ++Y SK H DL N
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARN--- 243
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF------TPPEYLRTGRVIPESVVYSFGT 237
L + ++S FG+ + DG ++ T PE L GR ES V+SFG
Sbjct: 244 CLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGI 303
Query: 238 LLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292
LL + S P + + L + C + + RL +C Y
Sbjct: 304 LLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPD---------AVFRLMEQCWAY 354
Query: 293 EPRERPNAKSLVASLTPLQKE 313
EP +RP+ ++ L ++K
Sbjct: 355 EPGQRPSFSTIYQELQSIRKR 375
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 1e-16
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQE 436
+++ K++G+ A + A++CY+ I + P +++ R Y Q+
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHNHVLYSNRSAAYAKKGDYQK 56
Query: 437 ALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKK 485
A D + + PDW + +AAAL L +A+ T + + N + K+
Sbjct: 57 AYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKE 110
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 6e-16
Identities = 48/292 (16%), Positives = 101/292 (34%), Gaps = 54/292 (18%)
Query: 70 VYKG-LVDEDRWIAVKRFNRSAWPDSRQFLEEAR--AVGLLRSERLVNLIGCCCEGEER- 125
V+ G E +AVK F + + E L+R E ++ I +G
Sbjct: 53 VWMGKWRGEK--VAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107
Query: 126 ---LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH----- 177
L+ ++ N +L +L ++ + +++A L + ++ +
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 178 --DLNTYRILFDQDGNPRLSCFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVI 227
DL + IL ++G ++ GL + ++ + T PE L +
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLN 223
Query: 228 PESV-------VYSFGTLLLDLLSGKHI--------PPSHALDLIRGKNFLMLMDSCLEG 272
+YSFG +L ++ P H L M C++
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK 283
Query: 273 -------HFSNDDGT-ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
+S+D+ ++ +L + C + P R A + +L + + ++
Sbjct: 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 1e-15
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 443
K G+AA K++ AI+ YT + ++P + R Y S ++A DA
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALS----IAPANPIYLSNRAAAYSASGQHEKAAEDAEL 70
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLE 482
A V+ P + A+ A F + A+E + G E
Sbjct: 71 ATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 2e-15
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 26/260 (10%)
Query: 70 VYKG-LVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
VY+G +AVK + +FL+EA + ++ LV L+G C ++
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFD 187
EFM L +L Q + + + +A ++ A++Y K H +L L
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVG 352
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDL 242
++ +++ FGL + + A +T PE L + +S V++FG LL ++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 243 LSGKHIP-----PSHALDLIRGKNFLMLM-DSCLEGHFSNDDGTELVRLASRCLQYEPRE 296
+ P S +L+ K++ M + C E ++ L C Q+ P +
Sbjct: 413 ATYGMSPYPGIDLSQVYELLE-KDYRMERPEGCPE---------KVYELMRACWQWNPSD 462
Query: 297 RPNAKSLVASLTPLQKEAEV 316
RP+ + + + +E+ +
Sbjct: 463 RPSFAEIHQAFETMFQESSI 482
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 2e-15
Identities = 61/256 (23%), Positives = 102/256 (39%), Gaps = 30/256 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL-LV 128
V G ++ +AVK A ++ FL EA + LR LV L+G E + L +V
Sbjct: 209 VMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFD 187
E+M +L +L + ++ +L + +A++Y H DL +L
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVS 323
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTNLAF----TPPEYLRTGRVIPESVVYSFGTLLLDLL 243
+D ++S FGL +++ S T PE LR + +S V+SFG LL ++
Sbjct: 324 EDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380
Query: 244 S-GKH----IPPSHALDLIRGKNFLMLM-DSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
S G+ IP + + K + M D C + + C + R
Sbjct: 381 SFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPP---------AVYDVMKNCWHLDAATR 430
Query: 298 PNAKSLVASLTPLQKE 313
P L L ++
Sbjct: 431 PTFLQLREQLEHIRTH 446
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 2e-15
Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 24/260 (9%)
Query: 69 VVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
VY+G+ +AVK + +FL+EA + ++ LV L+G C +
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILF 186
+ EFM L +L Q + + + +A ++ A++Y K H DL L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLV 144
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLD 241
++ +++ FGL + + A +T PE L + +S V++FG LL +
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 242 LLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 296
+ + P S +L+ + + C E ++ L C Q+ P +
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSD 255
Query: 297 RPNAKSLVASLTPLQKEAEV 316
RP+ + + + +E+ +
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 8e-15
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 12/107 (11%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 443
K +G+ F+ D+PTA+ Y + P +++ R C Q AL D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVK----RDPENAILYSNRAACLTKLMEFQRALDDCDT 72
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKK 485
+ + + +AA L + + AQ + D +N EA++
Sbjct: 73 CIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEARE 119
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 8e-15
Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 27/263 (10%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129
V+ G + +A+K FL+EA+ + LR E+LV L E E +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQ 188
E+M +L L + ++ V +A +A + Y H DL IL +
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 315
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
+ +++ FGL + D + + A +T PE GR +S V+SFG LL +L
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 244 SGKHIP-----PSHALDLIRGKNFLMLM-DSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+ +P LD + + + M C E L L +C + EP ER
Sbjct: 376 TKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPE---------SLHDLMCQCWRKEPEER 425
Query: 298 PNAKSLVASLTPLQKEAEVPSYT 320
P + L A L + P Y
Sbjct: 426 PTFEYLQAFLEDY-FTSTEPQYQ 447
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 9e-15
Identities = 61/257 (23%), Positives = 103/257 (40%), Gaps = 30/257 (11%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL-L 127
V G ++ +AVK A ++ FL EA + LR LV L+G E + L +
Sbjct: 36 DVMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILF 186
V E+M +L +L + ++ +L + +A++Y H DL +L
Sbjct: 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLV 150
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTNLAF----TPPEYLRTGRVIPESVVYSFGTLLLDL 242
+D ++S FGL +++ S T PE LR + +S V+SFG LL ++
Sbjct: 151 SEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
Query: 243 LS-GKH----IPPSHALDLIRGKNFLM-LMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 296
S G+ IP + + K + M D C + + C +
Sbjct: 208 YSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPP---------AVYEVMKNCWHLDAAM 257
Query: 297 RPNAKSLVASLTPLQKE 313
RP+ L L ++
Sbjct: 258 RPSFLQLREQLEHIKTH 274
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 1e-14
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 443
K +G+ F+ D+P A++ YT I +P +++ R CY Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIK----RNPKDAKLYSNRAACYTKLLEFQLALKDCEE 75
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKK 485
+ P + + +AAAL + A + + D + EA
Sbjct: 76 CIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAAD 122
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 1e-14
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 443
K + + F+AKD+ AI+ Y+ I+ ++P+ + R L YL ++ ALGDA +
Sbjct: 17 KTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALGDATR 72
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKK 485
A + + +Y +AA+ LG A + + +AK
Sbjct: 73 AIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKM 119
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 1e-14
Identities = 50/256 (19%), Positives = 104/256 (40%), Gaps = 24/256 (9%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
VV G +AVK + +F +EA+ + L +LV G C + +V
Sbjct: 23 VVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFD 187
E++ N L +L + ++ + + + + + + + S H DL L D
Sbjct: 82 TEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVD 138
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDL 242
+D ++S FG+ + D + S+ ++ PE + +S V++FG L+ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 243 LSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
S +P S + + + L + + ++ C P +R
Sbjct: 199 FSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD---------TIYQIMYSCWHELPEKR 249
Query: 298 PNAKSLVASLTPLQKE 313
P + L++S+ PL+++
Sbjct: 250 PTFQQLLSSIEPLREK 265
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 1e-14
Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 27/263 (10%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129
V+ G + +A+K FL+EA+ + LR E+LV L E E +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340
Query: 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQ 188
E+M +L L + ++ V +A +A + Y H DL IL +
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 398
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
+ +++ FGL + D + + A +T PE GR +S V+SFG LL +L
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 244 SGKHIP-----PSHALDLIRGKNFLMLM-DSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+ +P LD + + + M C E L L +C + EP ER
Sbjct: 459 TKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPE---------SLHDLMCQCWRKEPEER 508
Query: 298 PNAKSLVASLTPLQKEAEVPSYT 320
P + L A L + P Y
Sbjct: 509 PTFEYLQAFLEDY-FTSTEPQYQ 530
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 2e-14
Identities = 57/262 (21%), Positives = 103/262 (39%), Gaps = 27/262 (10%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129
V+ ++ +AVK + FL EA + L+ ++LV L + E ++
Sbjct: 204 VWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261
Query: 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQ 188
EFM +L L E + + +A+ + + + H DL IL
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA 319
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
+++ FGL + D + + A +T PE + G +S V+SFG LL++++
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 244 SGKHIP-----PSHALDLIRGKNFLM-LMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+ IP + + + + M ++C E EL + RC + P ER
Sbjct: 380 TYGRIPYPGMSNPEVIRALE-RGYRMPRPENCPE---------ELYNIMMRCWKNRPEER 429
Query: 298 PNAKSLVASLTPLQKEAEVPSY 319
P + + + L A Y
Sbjct: 430 PTFEYIQSVLDDF-YTATESQY 450
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 73.7 bits (181), Expect = 2e-14
Identities = 48/288 (16%), Positives = 100/288 (34%), Gaps = 52/288 (18%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEAR--AVGLLRSERLVNLIGCCCEGE---- 123
V++G + +AVK F+ + R + EA +LR E ++ I +
Sbjct: 58 VWRGKWRGEE-VAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDY-----CSSKGR-ALYH 177
+ LV+++ + +L +L + +++AL A L + ++G+ A+ H
Sbjct: 114 QLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 178 -DLNTYRILFDQDGNPRLSCFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVIP 228
DL + IL ++G ++ GL + + T PE L +
Sbjct: 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSINM 229
Query: 229 ESV-------VYSFGTLLLDLLSGKHI--------PPSHALDLIRGKNFLMLMDSCLEGH 273
+ +Y+ G + ++ I P + L M C +
Sbjct: 230 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 289
Query: 274 --------FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
S + + ++ C R A + +L+ L ++
Sbjct: 290 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 4e-14
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 443
K++G+ F + +P A CY I +P V + R LCYL P++AL D +
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 68
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 488
A + A + + ++A L+ +L ++ N
Sbjct: 69 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 113
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 4e-14
Identities = 58/280 (20%), Positives = 101/280 (36%), Gaps = 37/280 (13%)
Query: 70 VYKGL--------VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
++KG+ + + +K +++ S F E A + L + LV G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLN 180
G+E +LV EF+ +L +L +N ++ VA LA A+ + L H ++
Sbjct: 84 GDENILVQEFVKFGSLDTYLKKNKNCI-NILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140
Query: 181 TYRIL----FDQDGNPRLSC----FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVI-PESV 231
IL D+ G+ + + PPE + + + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 232 VYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286
+SFGT L ++ SG P L + EL L
Sbjct: 201 KWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-DRHQL----------PAPKAAELANLI 249
Query: 287 SRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPH 326
+ C+ YEP RP+ ++++ L L VP + H
Sbjct: 250 NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSHHHHHH 289
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 5e-14
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 12/109 (11%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 443
K G+ + ++F A+ Y I+ ++P F R Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKKHR 487
A I P + A+ AL L + +A K D N K +
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNL 120
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 70.3 bits (172), Expect = 1e-13
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 443
K++G+ F + +P A CY I +P V + R LCYL P++AL D +
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 63
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 488
A + A + + ++A L+ +L ++ N
Sbjct: 64 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 1e-13
Identities = 56/267 (20%), Positives = 102/267 (38%), Gaps = 34/267 (12%)
Query: 70 VYKGLVDEDRWI--AVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERL 126
V KG+V ++ A+K N +A R FL EA + +V L+G +G+ L
Sbjct: 45 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104
Query: 127 LVAEFMPN----ETLSKHLFHWENQPMKWAMR----VRVALYLAQALDYCSSKGRALYH- 177
++ E M L N P+ +++A +A + Y ++ H
Sbjct: 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHR 162
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVIPESV 231
DL + +D ++ FG+ ++ + Y PE L+ G S
Sbjct: 163 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 222
Query: 232 VYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286
V+SFG +L ++ + + + L + L D+C + L L
Sbjct: 223 VWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------MLFELM 273
Query: 287 SRCLQYEPRERPNAKSLVASLTPLQKE 313
C QY P+ RP+ +++S+ +
Sbjct: 274 RMCWQYNPKMRPSFLEIISSIKEEMEP 300
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 1e-13
Identities = 49/286 (17%), Positives = 98/286 (34%), Gaps = 54/286 (18%)
Query: 70 VYKG-LVDEDRWIAVKRFNRSAWPDSRQFLEEA--RAVGLLRSERLVNLIGCCCEGE--- 123
V++G E+ +AVK F+ D + + E +LR E ++ I
Sbjct: 24 VWRGSWQGEN--VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78
Query: 124 -ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH----- 177
+ L+ + +L +L + + +R+ L +A L + +
Sbjct: 79 TQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135
Query: 178 --DLNTYRILFDQDGNPRLSCFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVI 227
DL + IL ++G ++ GL +++ + T PE L +
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQ 194
Query: 228 PESV-------VYSFGTLLLDLLSGKH---IPPSHAL---DLIRGKNFLMLMDS--CLEG 272
+ +++FG +L ++ I + D++ M C++
Sbjct: 195 VDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQ 254
Query: 273 H--------FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
FS+ T L +L C P R A + +LT +
Sbjct: 255 QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 1e-13
Identities = 57/263 (21%), Positives = 97/263 (36%), Gaps = 29/263 (11%)
Query: 70 VYKGL--VDEDRWI--AVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEE 124
V++G+ E+ + A+K R+ FL+EA + +V LIG
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENP 464
Query: 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYR 183
++ E L L + + A + A L+ AL Y SK H D+
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTL 238
+L + +L FGL + D Y + + PE + R S V+ FG
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 239 LLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293
+ ++L P + + I L + +C L L ++C Y+
Sbjct: 582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 632
Query: 294 PRERPNAKSLVASLTPLQKEAEV 316
P RP L A L+ + +E ++
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKL 655
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 2e-13
Identities = 63/319 (19%), Positives = 107/319 (33%), Gaps = 54/319 (16%)
Query: 28 ENGSTDALPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV------DEDRWI 81
G T ++ +E + ++ G A VY+G V +
Sbjct: 55 FAGKTSSISDLKEVPRKNIT----------LIRGLGHGAFGEVYEGQVSGMPNDPSPLQV 104
Query: 82 AVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
AVK FL EA + + +V IG + R ++ E M L
Sbjct: 105 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 164
Query: 141 L---FHWENQPMKWAMR--VRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRL 194
L +QP AM + VA +A Y H D+ L G R+
Sbjct: 165 LRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRV 222
Query: 195 SC---FGLMKNSRD--GKSY---STNLAF----TPPEYLRTGRVIPESVVYSFGTLLLDL 242
+ FG+ +RD Y PPE G ++ +SFG LL ++
Sbjct: 223 AKIGDFGM---ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
Query: 243 LS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
S G L+ + + +C + R+ ++C Q++P +R
Sbjct: 280 FSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG---------PVYRIMTQCWQHQPEDR 330
Query: 298 PNAKSLVASLTPLQKEAEV 316
PN ++ + ++ +V
Sbjct: 331 PNFAIILERIEYCTQDPDV 349
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 3e-13
Identities = 58/270 (21%), Positives = 102/270 (37%), Gaps = 32/270 (11%)
Query: 70 VYKGLV----DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEE 124
VY G A+K +R + FL E + L ++ LIG E
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 125 RLL-VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTY 182
+ +M + L + + + P + + L +A+ ++Y + + H DL
Sbjct: 97 LPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYLAEQK--FVHRDLAAR 153
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF--------TPPEYLRTGRVIPESVVYS 234
+ D+ +++ FGL ++ D + YS T E L+T R +S V+S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 235 FGTLLLDLLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289
FG LL +LL+ G HI P + L + C + L ++ +C
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD---------SLYQVMQQC 264
Query: 290 LQYEPRERPNAKSLVASLTPLQKEAEVPSY 319
+ +P RP + LV + + Y
Sbjct: 265 WEADPAVRPTFRVLVGEVEQIVSALLGDHY 294
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 4e-13
Identities = 51/246 (20%), Positives = 91/246 (36%), Gaps = 19/246 (7%)
Query: 70 VYKGL-VDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCC---CEGE 123
VYKGL + +A S ++F EEA + L+ +V +G+
Sbjct: 42 VYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101
Query: 124 ERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNT 181
+ + LV E M + TL +L + MK + + + L + ++ + H DL
Sbjct: 102 KCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC 159
Query: 182 YRILFD-QDGNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESV-VYSFGT 237
I G+ ++ GL R + + F PE ESV VY+FG
Sbjct: 160 DNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK--YDESVDVYAFGM 217
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+L++ + + P + + + F E+ + C++ ER
Sbjct: 218 CMLEMATSE--YPYSECQNAA-QIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 274
Query: 298 PNAKSL 303
+ K L
Sbjct: 275 YSIKDL 280
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 4e-13
Identities = 54/279 (19%), Positives = 99/279 (35%), Gaps = 41/279 (14%)
Query: 69 VVYKGLVD-----EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE 123
V D +AVK+ S R F E + L+ + +V G C
Sbjct: 56 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115
Query: 124 ER--LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLN 180
R L+ E++P +L +L + + + ++ + + ++Y +K H DL
Sbjct: 116 RRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLA 172
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVIPESVVY 233
T IL + + ++ FGL K K Y PE L + S V+
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 232
Query: 234 SFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV----RLA--- 286
SFG +L +L + S + F+ ++ + +G EL+ RL
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAE------FMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 286
Query: 287 ----------SRCLQYEPRERPNAKSLVASLTPLQKEAE 315
+ C +RP+ + L + ++ +
Sbjct: 287 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 4e-13
Identities = 58/320 (18%), Positives = 106/320 (33%), Gaps = 48/320 (15%)
Query: 29 NGSTDALPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV------DEDRWIA 82
G T ++ +E + ++ G A VY+G V +A
Sbjct: 15 AGKTSSISDLKEVPRKNIT----------LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVA 64
Query: 83 VKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL 141
VK FL EA + + +V IG + R ++ E M L L
Sbjct: 65 VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124
Query: 142 -----FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLS 195
+ + + VA +A Y H D+ L G R++
Sbjct: 125 RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVA 182
Query: 196 C---FGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVIPESVVYSFGTLLLDLLS-G 245
FG+ ++ Y + PPE G ++ +SFG LL ++ S G
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 242
Query: 246 KH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 301
L+ + + +C + R+ ++C Q++P +RPN
Sbjct: 243 YMPYPSKSNQEVLEFVTSGGRMDPPKNCPG---------PVYRIMTQCWQHQPEDRPNFA 293
Query: 302 SLVASLTPLQKEAEVPSYTL 321
++ + ++ +V + L
Sbjct: 294 IILERIEYCTQDPDVINTAL 313
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 4e-13
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 24/256 (9%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
VV G +A+K + +F+EEA+ + L E+LV L G C + ++
Sbjct: 39 VVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFD 187
E+M N L +L ++ + + + + +A++Y SK H DL L +
Sbjct: 98 TEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVN 154
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDL 242
G ++S FGL + D + S+ + ++PPE L + +S +++FG L+ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 243 LSGKHIP-P----SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
S +P S + I L E ++ + C + ER
Sbjct: 215 YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---------KVYTIMYSCWHEKADER 265
Query: 298 PNAKSLVASLTPLQKE 313
P K L++++ + E
Sbjct: 266 PTFKILLSNILDVMDE 281
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 4e-13
Identities = 53/282 (18%), Positives = 95/282 (33%), Gaps = 45/282 (15%)
Query: 70 VYKGLV----DEDRWIAVKRFNRSAWPDSR--QFLEEARAVGLLRSERLVNLIGCCCEGE 123
V + + +AVK S +FL EA + + L+G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98
Query: 124 ER------LLVAEFMPN----ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGR 173
+ +++ FM + L + VR + +A ++Y SS+
Sbjct: 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN- 157
Query: 174 ALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSY---STNLAF----TPPEYLRT 223
H DL + +D ++ FGL SR Y E L
Sbjct: 158 -FIHRDLAARNCMLAEDMTVCVADFGL---SRKIYSGDYYRQGCASKLPVKWLALESLAD 213
Query: 224 GRVIPESVVYSFGTLLLDLLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278
S V++FG + ++++ G+ I + + + G N L C+E
Sbjct: 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECME------- 266
Query: 279 GTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYT 320
E+ L +C +P++RP+ L L + V S +
Sbjct: 267 --EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 6e-13
Identities = 60/288 (20%), Positives = 102/288 (35%), Gaps = 55/288 (19%)
Query: 70 VYKGLVD-----EDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGE 123
V D +AVK A P R + +E + L E ++ GCC +
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 124 ER--LLVAEFMPN----ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
LV E++P + L +H + +A ++ + + Y ++ H
Sbjct: 107 AASLQLVMEYVPLGSLRDYLPRHSIGLAQL-LLFAQQI------CEGMAYLHAQH--YIH 157
Query: 178 -DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVIPE 229
DL +L D D ++ FGL K +G Y + PE L+ +
Sbjct: 158 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA 217
Query: 230 SVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV----RL 285
S V+SFG L +LL +H + + +G + TEL+ RL
Sbjct: 218 SDVWSFGVTLYELL-------THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL 270
Query: 286 A-------------SRCLQYEPRERPNAKSLVASLTPLQK--EAEVPS 318
C + E RP ++L+ L + + + + PS
Sbjct: 271 PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPS 318
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 6e-13
Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 25/261 (9%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129
V+ G + +AVK + + FL EA + L+ +RLV L + E ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + H DL IL
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSD 144
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
+ +++ FGL + D + + A +T PE + G +S V+SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 244 SGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298
+ IP + + ++ D+C E EL +L C + P +RP
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRP 255
Query: 299 NAKSLVASLTPLQKEAEVPSY 319
L + L E Y
Sbjct: 256 TFDYLRSVLEDFFTATE-GQY 275
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 8e-13
Identities = 56/263 (21%), Positives = 96/263 (36%), Gaps = 29/263 (11%)
Query: 69 VVYKGL--VDEDRWI--AVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGE 123
V++G+ E+ + A+K R+ FL+EA + +V LIG
Sbjct: 30 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITEN 88
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTY 182
++ E L L + ++ + A L+ AL Y SK H D+
Sbjct: 89 PVWIIMELCTLGELRSFLQVRKYSLDLASL-ILYAYQLSTALAYLESKR--FVHRDIAAR 145
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGT 237
+L + +L FGL + D Y + + PE + R S V+ FG
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 205
Query: 238 LLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292
+ ++L P + + I L + +C L L ++C Y
Sbjct: 206 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAY 256
Query: 293 EPRERPNAKSLVASLTPLQKEAE 315
+P RP L A L+ + +E +
Sbjct: 257 DPSRRPRFTELKAQLSTILEEEK 279
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 9e-13
Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 24/257 (9%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
+V+ G +A+K A F+EEA + L +LV L G C E LV
Sbjct: 23 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFD 187
EFM + LS +L + + + L + + + Y + H DL L
Sbjct: 82 TEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVG 138
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGTLLLDL 242
++ ++S FG+ + D + S+ + PE R +S V+SFG L+ ++
Sbjct: 139 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
Query: 243 LSGKHIP-P----SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
S IP S ++ I L + ++ + C + P +R
Sbjct: 199 FSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST---------HVYQIMNHCWRERPEDR 249
Query: 298 PNAKSLVASLTPLQKEA 314
P L+ L + +
Sbjct: 250 PAFSRLLRQLAEIAESG 266
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 68.5 bits (167), Expect = 1e-12
Identities = 40/314 (12%), Positives = 83/314 (26%), Gaps = 68/314 (21%)
Query: 69 VVYKGL-VDEDRWIAVK---RFNRSAWPDSRQFLEEARAVGLLRSER------------- 111
+ + V R +Q EE + LLR +
Sbjct: 93 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 152
Query: 112 ---------LVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW---------ENQPMKWAM 153
+I + + +++ F + +L + ++ +
Sbjct: 153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 212
Query: 154 RVRVALYLAQALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGLMKNSRDGKSY 209
R+++ L + + L G L H L + I+ DQ G L+ F +
Sbjct: 213 RLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGASAVS 267
Query: 210 STNLAFTPPEYL----------RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG 259
F PPE + ++ G + + P+ + G
Sbjct: 268 PIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LPNTDDAALGG 325
Query: 260 KNFLMLMDSCLEGHFSNDDGT--ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317
E F + + L L+Y +R + + Q E+
Sbjct: 326 ----------SEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 375
Query: 318 SYTLMGIPHGTAST 331
+ + G +
Sbjct: 376 AALPLYQTDGEPTR 389
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 1e-12
Identities = 62/263 (23%), Positives = 103/263 (39%), Gaps = 29/263 (11%)
Query: 69 VVYKGL----VDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGE 123
VY+G+ E +AVK + D+++ F+ EA + L +V LIG E E
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEE 85
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTY 182
++ E P L +L +N + V +L + +A+ Y S H D+
Sbjct: 86 PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVIPESVVYSFGT 237
IL +L FGL + D Y ++ + PE + R S V+ F
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202
Query: 238 LLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292
+ ++LS P + ++ + L D C L L +RC Y
Sbjct: 203 CMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPP---------VLYTLMTRCWDY 253
Query: 293 EPRERPNAKSLVASLTPLQKEAE 315
+P +RP LV SL+ + + +
Sbjct: 254 DPSDRPRFTELVCSLSDVYQMEK 276
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 2e-12
Identities = 65/323 (20%), Positives = 111/323 (34%), Gaps = 37/323 (11%)
Query: 70 VYKGLV----DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEE 124
V G + ++ +A+K R+ FL EA +G ++ L G + +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY-H-DLNTY 182
++V E+M N +L L + Q V + +A + Y S G Y H DL
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAAR 176
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVIPESVVYSF 235
IL + + ++S FGL + D + T PE + + S V+S+
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
Query: 236 GTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290
G +L +++S P + + L C L +L C
Sbjct: 237 GIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA---------ALYQLMLDCW 287
Query: 291 QYEPRERPNAKSLVASLT-----PLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACS 345
Q + RP + +V+ L P + + S T G+ +
Sbjct: 288 QKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDWLN 347
Query: 346 RLDLTAIHEILEKVGYKDDEGIA 368
+ EI V Y + IA
Sbjct: 348 GVWTAHCKEIFTGVEYSSCDTIA 370
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 53/279 (18%), Positives = 98/279 (35%), Gaps = 41/279 (14%)
Query: 69 VVYKGLVD-----EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE 123
V D +AVK+ S R F E + L+ + +V G C
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84
Query: 124 ER--LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLN 180
R L+ E++P +L +L + + + ++ + + ++Y +K H DL
Sbjct: 85 RRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLA 141
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVIPESVVY 233
T IL + + ++ FGL K K + PE L + S V+
Sbjct: 142 TRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVW 201
Query: 234 SFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV----RLA--- 286
SFG +L +L + S + F+ ++ + +G EL+ RL
Sbjct: 202 SFGVVLYELFTYIEKSKSPPAE------FMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 255
Query: 287 ----------SRCLQYEPRERPNAKSLVASLTPLQKEAE 315
+ C +RP+ + L + ++
Sbjct: 256 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-12
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFI--DGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQA 444
+K G+ F+ D+ A+ YT + D + R C+L + +A +A +A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 445 QVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKK 485
A Y ++ AL LG + A L+ + N ++
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQE 137
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 3e-12
Identities = 56/270 (20%), Positives = 104/270 (38%), Gaps = 32/270 (11%)
Query: 70 VYKGLV----DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEE 124
VY G + + AVK NR FL E + +++L+G C E
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 125 -RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTY 182
L+V +M + L + + + P + + L +A+ + Y +SK H DL
Sbjct: 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASKK--FVHRDLAAR 157
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF--------TPPEYLRTGRVIPESVVYS 234
+ D+ +++ FGL ++ D + YS + E L+T + +S V+S
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 235 FGTLLLDLLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289
FG LL +L++ G + + L+ + C + L + +C
Sbjct: 218 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVMLKC 268
Query: 290 LQYEPRERPNAKSLVASLTPLQKEAEVPSY 319
+ RP+ LV+ ++ + Y
Sbjct: 269 WHPKAEMRPSFSELVSRISAIFSTFIGEHY 298
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 5e-12
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALG 439
++ K + + F+AKD+ AI+ Y+ I+ + + R L YL ++ ALG
Sbjct: 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALG 61
Query: 440 DAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 476
DA +A + + +Y +AA+ LG A +
Sbjct: 62 DATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE 98
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 5e-12
Identities = 46/268 (17%), Positives = 99/268 (36%), Gaps = 37/268 (13%)
Query: 69 VVYKG-LVDEDRW----IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEG 122
VYKG + E +A+K + P + + L+EA + + + + L+G C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL-- 179
L+ + MP L ++ + + + +A+ ++Y + L H DL
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 180 -NTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVIPESVV 232
N +L + +++ FGL K + + E + +S V
Sbjct: 146 RN---VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 202
Query: 233 YSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287
+S+G + +L++ G IP S ++ L C ++ +
Sbjct: 203 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI---------DVYMIMR 253
Query: 288 RCLQYEPRERPNAKSLVASLTPLQKEAE 315
+C + RP + L+ + + ++ +
Sbjct: 254 KCWMIDADSRPKFRELIIEFSKMARDPQ 281
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 6e-12
Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 38/279 (13%)
Query: 70 VYKGLV----DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124
VY G + + AVK NR + QFL E + +++L+G C E
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 125 -RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTY 182
L+V +M + L + + + P + + L +A+ + + +SK H DL
Sbjct: 165 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASKK--FVHRDLAAR 221
Query: 183 RILFDQDGNPRLSCFGLMKNSRD------GKSYSTNLAF-----TPPEYLRTGRVIPESV 231
+ D+ +++ FGL +RD ++ A E L+T + +S
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 232 VYSFGTLLLDLLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286
V+SFG LL +L++ G + + L+ + C + L +
Sbjct: 279 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 329
Query: 287 SRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIP 325
+C + RP+ LV+ ++ + Y +
Sbjct: 330 LKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNAT 368
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 7e-12
Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 443
+ G F D+P A++ YT I +P ++ R EA+ D +
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIK----RAPEDARGYSNRAAALAKLMSFPEAIADCNK 63
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486
A P++ A+ +A A + A ETL +A+ +
Sbjct: 64 AIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN 106
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 1e-11
Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 32/257 (12%)
Query: 69 VVYKGLVDEDRW---IAVK--RFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE 123
V KG + +AVK + + + L EA + L + +V +IG CE E
Sbjct: 32 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICEAE 90
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTY 182
+LV E L+K+L +N+ +K + + ++ + Y H DL
Sbjct: 91 SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAAR 146
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVIPESVVYSF 235
+L ++S FGL K R ++Y T+ + PE + + +S V+SF
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206
Query: 236 GTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290
G L+ + S P S ++ + C E+ L + C
Sbjct: 207 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCW 257
Query: 291 QYEPRERPNAKSLVASL 307
Y+ RP ++ L
Sbjct: 258 TYDVENRPGFAAVELRL 274
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 59/274 (21%), Positives = 101/274 (36%), Gaps = 41/274 (14%)
Query: 70 VYKGLV------DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE 123
V+ + +AVK + F EA + L+ E +V G C +G+
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
Query: 124 ERLLVAEFMPN----ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS--SKGRALY- 176
++V E+M + + L H + + L L+Q L S + G Y
Sbjct: 91 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMV-YL 149
Query: 177 ------H-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYS--TNLAF----TPPEYLRT 223
H DL T L + ++ FG+ ++ Y + PPE +
Sbjct: 150 ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY 209
Query: 224 GRVIPESVVYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278
+ ES V+SFG +L ++ + GK + + ++ I L C +
Sbjct: 210 RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK------- 262
Query: 279 GTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
E+ + C Q EP++R N K + L L K
Sbjct: 263 --EVYDVMLGCWQREPQQRLNIKEIYKILHALGK 294
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 1e-11
Identities = 53/266 (19%), Positives = 101/266 (37%), Gaps = 31/266 (11%)
Query: 70 VYKGL---VDEDRWI--AVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGE 123
VYKG+ + + A+K R FL EA +G ++ L G + +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTY 182
+++ E+M N L K L + + + V + +A + Y ++ H DL
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGMKYLANMN--YVHRDLAAR 176
Query: 183 RILFDQDGNPRLSCFGL---MKNSRDGKSYSTNLAF----TPPEYLRTGRVIPESVVYSF 235
IL + + ++S FGL +++ + ++ T PE + + S V+SF
Sbjct: 177 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 236
Query: 236 GTLLLDLLSGKHIP-P----SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290
G ++ ++++ P + I L C + +L +C
Sbjct: 237 GIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPS---------AIYQLMMQCW 287
Query: 291 QYEPRERPNAKSLVASLTPLQKEAEV 316
Q E RP +V+ L L + +
Sbjct: 288 QQERARRPKFADIVSILDKLIRAPDS 313
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 2e-11
Identities = 56/286 (19%), Positives = 105/286 (36%), Gaps = 47/286 (16%)
Query: 70 VYKGL---VDEDRW-----IAVKRFNRSAWPDSRQ-FLEEARAVGLLRS-ERLVNLIGCC 119
V +D+D+ +AVK A + E + ++ + ++NL+G C
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110
Query: 120 CEGEERLLVAEFMPNETLSKHL--------------FHWENQPMKWAMRVRVALYLAQAL 165
+ ++ E+ L ++L + M + V LA+ +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 166 DYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF----TPP 218
+Y +S+ H DL +L ++ +++ FGL ++ + Y +TN P
Sbjct: 171 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 219 EYLRTGRVIPESVVYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGH 273
E L +S V+SFG L+ ++ + G IP L++ + + +C
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN-- 286
Query: 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSY 319
EL + C P +RP K LV L + Y
Sbjct: 287 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEY 325
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 55/275 (20%), Positives = 100/275 (36%), Gaps = 45/275 (16%)
Query: 70 VYKGLVDEDRW-----IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGE 123
V D + +AVK + + +E + L E +V G C E
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 124 ER--LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLN 180
L+ EF+P+ +L ++L +N+ + +++ A+ + + +DY S+ H DL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQ--YVHRDLA 153
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVIPESVVY 233
+L + + ++ FGL K K Y + PE L + S V+
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 234 SFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV----RLAS- 287
SFG L +LL+ AL + M G + + RL
Sbjct: 214 SFGVTLHELLTYCDSDSSPMAL--------FLKMIGPTHGQMTVTRLVNTLKEGKRLPCP 265
Query: 288 ------------RCLQYEPRERPNAKSLVASLTPL 310
+C +++P R + ++L+ L
Sbjct: 266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 57/261 (21%), Positives = 91/261 (34%), Gaps = 32/261 (12%)
Query: 69 VVYKGL----VDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGE 123
V G D +A+K R+ FL EA +G ++ L G G
Sbjct: 64 EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR 123
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY-H-DLNT 181
++V E+M N +L L + Q V + + + Y S G Y H DL
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQF-TIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAA 179
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVIPESVVYS 234
+L D + ++S FGL + D +T T PE + S V+S
Sbjct: 180 RNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWS 239
Query: 235 FGTLLLDLLSGKHIP-P----SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289
FG ++ ++L+ P + + L C L +L C
Sbjct: 240 FGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH---------ALHQLMLDC 290
Query: 290 LQYEPRERPNAKSLVASLTPL 310
+ +RP +V+ L L
Sbjct: 291 WHKDRAQRPRFSQIVSVLDAL 311
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 4e-11
Identities = 46/268 (17%), Positives = 102/268 (38%), Gaps = 37/268 (13%)
Query: 69 VVYKG-LVDEDRWI----AVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEG 122
VYKG + E + A+K + P + + L+EA + + + + L+G C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL-- 179
L+ + MP L ++ ++ + + + +A+ ++Y + L H DL
Sbjct: 89 STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 180 -NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVV 232
N +L + +++ FGL K + + + E + +S V
Sbjct: 146 RN---VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 202
Query: 233 YSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287
+S+G + +L++ G IP S ++ L C ++ +
Sbjct: 203 WSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI---------DVYMIMV 253
Query: 288 RCLQYEPRERPNAKSLVASLTPLQKEAE 315
+C + RP + L+ + + ++ +
Sbjct: 254 KCWMIDADSRPKFRELIIEFSKMARDPQ 281
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 71/334 (21%), Positives = 122/334 (36%), Gaps = 52/334 (15%)
Query: 14 PSNLKSNLHESSDLENGSTDALPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKG 73
P+ K + + +EN + + + E GE A V+
Sbjct: 11 PTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIV----------LKWELGEGAFGKVFLA 60
Query: 74 ----LVDEDRWI--AVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
L+ E + AVK ++ + F EA + +L+ + +V G C EG L+
Sbjct: 61 ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120
Query: 128 VAEFMPNETLSKHL-------------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRA 174
V E+M + L++ L P+ + VA +A + Y +
Sbjct: 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-- 178
Query: 175 LYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVI 227
H DL T L Q ++ FG+ ++ Y PPE + +
Sbjct: 179 FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT 238
Query: 228 PESVVYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282
ES V+SFG +L ++ + GK + + A+D I L +C E+
Sbjct: 239 TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPP---------EV 289
Query: 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
+ C Q EP++R + K + A L L + V
Sbjct: 290 YAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 323
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 5e-11
Identities = 53/256 (20%), Positives = 91/256 (35%), Gaps = 30/256 (11%)
Query: 69 VVYKG-LVDEDRWI--AVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEE 124
V +G + I A+K + + + EA+ + L + +V LIG C+ E
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 409
Query: 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYR 183
+LV E L K L + + + + ++ + Y K H +L
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARN 466
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESVVYSFG 236
+L ++S FGL K SY T L + PE + + S V+S+G
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 237 TLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291
+ + LS P + I + C EL L S C
Sbjct: 527 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 577
Query: 292 YEPRERPNAKSLVASL 307
Y+ +RP+ ++ +
Sbjct: 578 YKWEDRPDFLTVEQRM 593
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 5e-11
Identities = 48/270 (17%), Positives = 96/270 (35%), Gaps = 41/270 (15%)
Query: 69 VVYKG-LVDEDRWI----AVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEG 122
V+KG + E I +K + S Q + A+G L +V L+G C G
Sbjct: 28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86
Query: 123 EERLLVAEFMPNETLSKHLFHWENQP-----MKWAMRVRVALYLAQALDYCSSKGRALYH 177
LV +++P +L H+ + W +++ A+ + Y G + H
Sbjct: 87 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLEEHG--MVH 138
Query: 178 -DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPES 230
+L +L +++ FG+ + + E + G+ +S
Sbjct: 139 RNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQS 198
Query: 231 VVYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285
V+S+G + +L++ G + + DL+ L C ++ +
Sbjct: 199 DVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTI---------DVYMV 249
Query: 286 ASRCLQYEPRERPNAKSLVASLTPLQKEAE 315
+C + RP K L T + ++
Sbjct: 250 MVKCWMIDENIRPTFKELANEFTRMARDPP 279
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 9e-11
Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 44/271 (16%)
Query: 70 VYKGLV----DEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGE 123
V +G + +AVK +FL EA + ++ L+G C E
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109
Query: 124 -----ERLLVAEFMPN----ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRA 174
+ +++ FM L + + ++ + +A ++Y S++
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-- 167
Query: 175 LYH-DLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSY---STNLAF----TPPEYLRTG 224
H DL + D ++ FGL S+ Y E L
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGL---SKKIYSGDYYRQGRIAKMPVKWIAIESLADR 224
Query: 225 RVIPESVVYSFGTLLLDLLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279
+S V++FG + ++ + G + D + + L + CL+
Sbjct: 225 VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD-------- 276
Query: 280 TELVRLASRCLQYEPRERPNAKSLVASLTPL 310
EL + C + +P +RP L L L
Sbjct: 277 -ELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 56/283 (19%), Positives = 96/283 (33%), Gaps = 52/283 (18%)
Query: 70 VYKGLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124
V D +AVK+ S R F E + + L S+ +V G
Sbjct: 39 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98
Query: 125 R--LLVAEFMPNETLSKHLFHWE-----NQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
+ LV E++P+ L L ++ + ++ ++ + ++Y S+ H
Sbjct: 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYLGSRR--CVH 150
Query: 178 -DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVIPE 229
DL IL + + + +++ FGL K K Y PE L +
Sbjct: 151 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQ 210
Query: 230 SVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV----RL 285
S V+SFG +L +L + S + M C + EL+ RL
Sbjct: 211 SDVWSFGVVLYELFTYCDKSCS-------PSAEFLRMMGCERDVPALSRLLELLEEGQRL 263
Query: 286 A-------------SRCLQYEPRERPNAKSLVASLTPLQKEAE 315
C P++RP+ +L L L +
Sbjct: 264 PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 3e-10
Identities = 56/271 (20%), Positives = 96/271 (35%), Gaps = 37/271 (13%)
Query: 69 VVYKGL--VDEDRWIAV-----KRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
VV +G + ++V K S F+ E A+ L L+ L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLN 180
+V E P +L L + + + R A+ +A+ + Y SK H DL
Sbjct: 92 TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL-SRYAVQVAEGMGYLESKR--FIHRDLA 148
Query: 181 TYRILFDQDGNPRLSCFGLMKN-SRDGKSYSTN------LAFTPPEYLRTGRVIPESVVY 233
+L ++ FGLM+ ++ Y A+ PE L+T S +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
Query: 234 SFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM-LMDSCLEGHFSNDDGTELVRLAS 287
FG L ++ + P S L I + + + C + ++ +
Sbjct: 209 MFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ---------DIYNVMV 259
Query: 288 RCLQYEPRERPNAKSLVASLT---PLQKEAE 315
+C ++P +RP +L L P AE
Sbjct: 260 QCWAHKPEDRPTFVALRDFLLEAQPTDMRAE 290
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 3e-10
Identities = 51/256 (19%), Positives = 91/256 (35%), Gaps = 30/256 (11%)
Query: 69 VVYKGL---VDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEE 124
V +G+ + +A+K + + + EA+ + L + +V LIG C+ E
Sbjct: 25 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 83
Query: 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYR 183
+LV E L K L + + + + ++ + Y K H DL
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARN 140
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVIPESVVYSFG 236
+L ++S FGL K SY + + PE + + S V+S+G
Sbjct: 141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 200
Query: 237 TLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291
+ + LS P + I + C EL L S C
Sbjct: 201 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 251
Query: 292 YEPRERPNAKSLVASL 307
Y+ +RP+ ++ +
Sbjct: 252 YKWEDRPDFLTVEQRM 267
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 4e-10
Identities = 58/282 (20%), Positives = 105/282 (37%), Gaps = 47/282 (16%)
Query: 70 VYKGL---VDEDRW-----IAVKRFNRSA-WPDSRQFLEEARAVGLLRS-ERLVNLIGCC 119
V +D+D+ +AVK A D + E + ++ + ++NL+G C
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144
Query: 120 CEGEERLLVAEFMPNETLSKHL--------------FHWENQPMKWAMRVRVALYLAQAL 165
+ ++ E+ L ++L H + + V A +A+ +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204
Query: 166 DYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF----TPP 218
+Y +SK H DL +L +D +++ FGL ++ Y +TN P
Sbjct: 205 EYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262
Query: 219 EYLRTGRVIPESVVYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGH 273
E L +S V+SFG LL ++ + G +P L++ + + +C
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN-- 320
Query: 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315
EL + C P +RP K LV L +
Sbjct: 321 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 60.0 bits (145), Expect = 5e-10
Identities = 30/195 (15%), Positives = 55/195 (28%), Gaps = 36/195 (18%)
Query: 126 LLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL--- 179
L +T + L ++ + R+++ L + + L G L H L
Sbjct: 178 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPV 235
Query: 180 NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESV-------- 231
+ I+ DQ G L+ F + S + F PPE I
Sbjct: 236 D---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTF 292
Query: 232 ---VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGTELVRLA 286
++ G ++ + P I L + + + L
Sbjct: 293 SFDAWALGLVIYWIWCAD--LP------ITKDAALGGSEWIFRSCKNIP----QPVRALL 340
Query: 287 SRCLQYEPRERPNAK 301
L+Y +R
Sbjct: 341 EGFLRYPKEDRLLPL 355
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 5e-10
Identities = 55/280 (19%), Positives = 101/280 (36%), Gaps = 53/280 (18%)
Query: 70 VYKGLV--------DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRS-ERLVNLIGCC 119
V E +AVK A + E + ++ + ++NL+G C
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156
Query: 120 CEGEERLLVAEFMPNETLSKHL--------------FHWENQPMKWAMRVRVALYLAQAL 165
+ ++ E+ L ++L + M + V LA+ +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 166 DYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF---- 215
+Y +S+ H DL N +L ++ +++ FGL ++ + Y +TN
Sbjct: 217 EYLASQK--CIHRDLAARN---VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 271
Query: 216 TPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCL 270
PE L +S V+SFG L+ ++ + G IP L++ + + +C
Sbjct: 272 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT 331
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
EL + C P +RP K LV L +
Sbjct: 332 N---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 60.1 bits (145), Expect = 6e-10
Identities = 47/301 (15%), Positives = 76/301 (25%), Gaps = 57/301 (18%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDS---RQFLEEARAVGLLRSERLVNL--------- 115
VV+ V+ A+K F A + E A L E
Sbjct: 77 VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136
Query: 116 -----------IGCCCEGEERLLVAEF---MP-----NETLSKHLFHW--ENQPMKWAMR 154
G++ VA + MP E L L
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196
Query: 155 VRVALYLAQALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGL-MKNSRDGKSY 209
+ L + SKG L H N + DG L K G +
Sbjct: 197 HILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRGPAS 251
Query: 210 STNLAFTPPEYL--RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
S + + P E+L T + G + + P + ++
Sbjct: 252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF--LPFGLVTPGIKGSWKRPSL 309
Query: 268 SCL---EGHFSNDDGT--ELVRLASRCLQYEPRERPNAKSLVAS--LTPLQKE--AEVPS 318
F + + L R L ++ R R + + LQ E + + +
Sbjct: 310 RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSSLST 369
Query: 319 Y 319
Sbjct: 370 G 370
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 7e-10
Identities = 60/278 (21%), Positives = 103/278 (37%), Gaps = 45/278 (16%)
Query: 70 VYKGLVDEDRW---IAVKRFNRSAWPDSRQ-FLEEARAVGLLRS-ERLVNLIGCCCEGEE 124
V K + +D A+KR A D + F E + L ++NL+G C
Sbjct: 41 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100
Query: 125 RLLVAEFMPNETLSKHL--------------FHWENQPMKWAMRVRVALYLAQALDYCSS 170
L E+ P+ L L + + + A +A+ +DY S
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160
Query: 171 KGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF----TPPEYLRT 223
K H DL IL ++ +++ FGL SR + Y T E L
Sbjct: 161 KQ--FIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNY 215
Query: 224 GRVIPESVVYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278
S V+S+G LL +++S G + + + + L +C +
Sbjct: 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD------- 268
Query: 279 GTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
E+ L +C + +P ERP+ ++ SL + +E +
Sbjct: 269 --EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 1e-09
Identities = 55/271 (20%), Positives = 98/271 (36%), Gaps = 44/271 (16%)
Query: 70 VYKGLV------DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEG 122
VYKG + ++ + +A+K A R+ F EA L+ +V L+G +
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84
Query: 123 EERLLVAEFMPN----ETLSKHLFHWENQPMKWAMRVRVALYLAQALD----------YC 168
+ ++ + + E L H + V+ AL + Y
Sbjct: 85 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL 144
Query: 169 SSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA------FTPPEYL 221
SS + H DL T +L N ++S GL + Y + PE +
Sbjct: 145 SSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI 202
Query: 222 RTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHA----LDLIRGKNFLMLMDSCLEGHFSN 276
G+ +S ++S+G +L ++ S P ++ +++IR + L D C
Sbjct: 203 MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPA----- 257
Query: 277 DDGTELVRLASRCLQYEPRERPNAKSLVASL 307
+ L C P RP K + + L
Sbjct: 258 ----WVYALMIECWNEFPSRRPRFKDIHSRL 284
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 1e-09
Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 6/115 (5%)
Query: 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEAL 438
+ E + + AF + D+ AI ++ + R C++ P++A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 439 GDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKKHRN 488
D A + D AFY + + LG + + ++ D + H
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYK 252
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 5/102 (4%)
Query: 379 QIQETLNS----KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMP 434
+++ + G A A+ + +DG + + RR +L
Sbjct: 18 LYFQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKS 76
Query: 435 QEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 476
+ AL D + + D+ A + L G ++A++ K
Sbjct: 77 KAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFK 118
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 3/101 (2%)
Query: 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFID---GGTMVSPTVFARRCLCYLLSDMPQ 435
Q+++ + + R + A Y + + R C C+ + P
Sbjct: 253 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPV 312
Query: 436 EALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 476
EA+ + + PD A +A A M ++A + +
Sbjct: 313 EAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYE 353
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 56/292 (19%), Positives = 101/292 (34%), Gaps = 55/292 (18%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERL 126
VV++ +D A+KR +R+ + E +A+ L +V E
Sbjct: 20 VVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTE 79
Query: 127 ------------LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALY----LAQALDYCSS 170
+ + E L + + V L+ +A+A+++ S
Sbjct: 80 KLQPSSPKVYLYIQMQLCRKENLKDWM---NGRCTIEERERSVCLHIFLQIAEAVEFLHS 136
Query: 171 KGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV--- 226
KG L H DL I F D ++ FGL+ + T L P TG+V
Sbjct: 137 KG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTK 194
Query: 227 ---IPESV----------VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 273
PE + ++S G +L +LL P S ++ +R +
Sbjct: 195 LYMSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVR------TLTDVRNLK 244
Query: 274 FSNDDGT---ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLM 322
F + L P ERP A +++ + + ++ + P T++
Sbjct: 245 FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN--AVFEDLDFPGKTVL 294
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-09
Identities = 12/95 (12%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 443
K++G++ F+ + A+ CY I P ++ + + + +A+ Q
Sbjct: 8 KEQGNSLFKQGLYREAVHCYDQLIT----AQPQNPVGYSNKAMALIKLGEYTQAIQMCQQ 63
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDG 478
+ +++ + L + A +++
Sbjct: 64 GLRYTSTAEHV-AIRSKLQYRLELAQGAVGSVQIP 97
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 4e-09
Identities = 53/277 (19%), Positives = 95/277 (34%), Gaps = 50/277 (18%)
Query: 70 VYKGLV------DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRS-ERLVNLIGCCCE 121
V + D +AVK +A D ++ + E + + L E +VNL+G C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121
Query: 122 GEERLLVAEFMPNETLSKHL------------FHWENQPMKWAMRVRVALYLAQALDYCS 169
G L++ E+ L L F N + + +AQ + + +
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA 181
Query: 170 SKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRD---GKSY--STNLAF----TPPE 219
SK H D+ +L ++ FGL +RD +Y N PE
Sbjct: 182 SKN--CIHRDVAARNVLLTNGHVAKIGDFGL---ARDIMNDSNYIVKGNARLPVKWMAPE 236
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP----PSHA--LDLIRGKNFLMLMDSCLEGH 273
+ +S V+S+G LL ++ S P ++ L++ + +
Sbjct: 237 SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPK-- 294
Query: 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
+ + C EP RP + + + L
Sbjct: 295 -------NIYSIMQACWALEPTHRPTFQQICSFLQEQ 324
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 4e-09
Identities = 56/253 (22%), Positives = 90/253 (35%), Gaps = 38/253 (15%)
Query: 70 VYKGLVDEDRWI-AVKRFNRSAWP--DSRQFLEEARAV-GLLRSERLVNLIGCCCEGEER 125
V+K ED + AVKR D + L E + + + V L EG
Sbjct: 73 VFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132
Query: 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRV---RVALYLAQ---ALDYCSSKGRALYHDL 179
L E +L +H W + +V YL AL + S+G ++ D+
Sbjct: 133 YLQTELC-GPSLQQHC-------EAWGASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDV 183
Query: 180 NTYRILFDQDGNPRLSCFGLMKN-SRDGKSYSTNLAF--TP----PEYLRTGRVIPESVV 232
I G +L FGL+ G P PE L+ + V
Sbjct: 184 KPANIFLGPRGRCKLGDFGLLVELGTAGAGEV----QEGDPRYMAPELLQGSYG-TAADV 238
Query: 233 YSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292
+S G +L++ P G+ + L L F+ +EL + L+
Sbjct: 239 FSLGLTILEVACNME-LPHG------GEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEP 291
Query: 293 EPRERPNAKSLVA 305
+P+ R A++L+A
Sbjct: 292 DPKLRATAEALLA 304
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 4e-09
Identities = 59/279 (21%), Positives = 103/279 (36%), Gaps = 52/279 (18%)
Query: 70 VYKGLV------DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEG 122
V K +AVK +A P + L E + + ++ L G C +
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 123 EERLLVAEFMPNETLSKHL----------------------FHWENQPMKWAMRVRVALY 160
LL+ E+ +L L H + + + + A
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 161 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF-- 215
++Q + Y + L H DL IL + ++S FGL ++ + SY +
Sbjct: 159 ISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPV 216
Query: 216 --TPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDS 268
E L +S V+SFG LL ++++ G + IPP +L++ + + D+
Sbjct: 217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDN 276
Query: 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E E+ RL +C + EP +RP + L
Sbjct: 277 CSE---------EMYRLMLQCWKQEPDKRPVFADISKDL 306
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 8e-09
Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 6/115 (5%)
Query: 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEAL 438
+ E + + AF D+ AI ++ + R C++ P++A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 439 GDAMQAQVISPDWPTAFYLQAAALFGLGMNNDA----QETLK-DGTNLEAKKHRN 488
D A + D AFY + + LG + + +E LK D + H
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYK 229
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 17/117 (14%), Positives = 40/117 (34%), Gaps = 8/117 (6%)
Query: 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFID---GGTMVSPTVFARRCLCYLLSDMPQ 435
Q+++ + + R + A Y + + R C C+ + P
Sbjct: 230 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPV 289
Query: 436 EALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK-----DGTNLEAKKHR 487
EA+ + + PD A +A A M ++A + + + + + ++
Sbjct: 290 EAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGL 346
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 7/93 (7%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLLSDMPQEALGDAMQ 443
+ G A A+ + +DG P + RR +L + AL D +
Sbjct: 7 LELGKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTK 62
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 476
+ D+ A + L G ++A++ K
Sbjct: 63 VIALKMDFTAARLQRGHLLLKQGKLDEAEDDFK 95
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 9e-09
Identities = 46/267 (17%), Positives = 84/267 (31%), Gaps = 65/267 (24%)
Query: 82 AVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL-------------LV 128
A+K+ + L E + L + +V E + +
Sbjct: 35 AIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQ 93
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYH-DL---NT 181
E+ N TL + ++ + R Q AL Y S+G + H DL N
Sbjct: 94 MEYCENGTLYDLI---HSENLNQQ-RDEYWRLFRQILEALSYIHSQG--IIHRDLKPMN- 146
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF--------------TP----PEYLRT 223
I D+ N ++ FGL KN + T E L
Sbjct: 147 --IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG 204
Query: 224 GRVIPESV-VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG------HFSN 276
E + +YS G + +++ P S G + ++ F +
Sbjct: 205 TGHYNEKIDMYSLGIIFFEMIY----PFST------GMERVNILKKLRSVSIEFPPDFDD 254
Query: 277 DDGTELVRLASRCLQYEPRERPNAKSL 303
+ ++ + ++P +RP A++L
Sbjct: 255 NKMKVEKKIIRLLIDHDPNKRPGARTL 281
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 61/287 (21%), Positives = 105/287 (36%), Gaps = 52/287 (18%)
Query: 70 VYKGLV------DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEG 122
V++ + +AVK A D + F EA + + +V L+G C G
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122
Query: 123 EERLLVAEFMPN----------------------ETLSKHLFHWENQPMKWAMRVRVALY 160
+ L+ E+M + + P+ A ++ +A
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182
Query: 161 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF-- 215
+A + Y S + H DL T L ++ +++ FGL +N Y N A
Sbjct: 183 VAAGMAYLSERK--FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 240
Query: 216 --TPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKH----IPPSHALDLIRGKNFLMLMDS 268
PPE + R ES V+++G +L ++ S G + + +R N L ++
Sbjct: 241 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 300
Query: 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315
C EL L C P +RP+ S+ L + + AE
Sbjct: 301 CPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 1e-08
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP--TVFARRCLCYLLSDMPQEALGDAMQA 444
K +G+ FR K + AI+ Y ++ + ++ CY+ ++ + + +A
Sbjct: 10 KDKGNQFFRNKKYDDAIKYYNWALE----LKEDPVFYSNLSACYVSVGDLKKVVEMSTKA 65
Query: 445 QVISPDWPTAFYLQAAALFGLGMNNDAQETLK 476
+ PD+ +A+A GLG DA L
Sbjct: 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLS 97
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 6/89 (6%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFA--RRCLCYLLSDMPQEALGDAMQA 444
+ G F D A E I+ + P V + L + E +A
Sbjct: 241 EHTGIFKFLKNDPLGAHEDIKKAIE----LFPRVNSYIYMALIMADRNDSTEYYNYFDKA 296
Query: 445 QVISPDWPTAFYLQAAALFGLGMNNDAQE 473
+ + + +Y + F L + A +
Sbjct: 297 LKLDSNNSSVYYHRGQMNFILQNYDQAGK 325
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 52/275 (18%), Positives = 95/275 (34%), Gaps = 48/275 (17%)
Query: 70 VYKGLV------DEDRWIAVKRFNRSAWPDSRQ-FLEEARA-VGLLRSERLVNLIGCCCE 121
V + D +AVK SA R+ + E + L +VNL+G C
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98
Query: 122 GEERLLVAEFMPN----------------ETLSKHLFHWENQPMKWAMRVRVALYLAQAL 165
G L++ E+ S + + + + + +A+ +
Sbjct: 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 166 DYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF----TPP 218
+ +SK H DL IL ++ FGL ++ ++ +Y N P
Sbjct: 159 AFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 219 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIP----PSHA--LDLIRGKNFLMLMDSCLEG 272
E + ES V+S+G L +L S P P + +I+ ++ +
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPA- 275
Query: 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
E+ + C +P +RP K +V +
Sbjct: 276 --------EMYDIMKTCWDADPLKRPTFKQIVQLI 302
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 2e-08
Identities = 42/279 (15%), Positives = 81/279 (29%), Gaps = 62/279 (22%)
Query: 58 IVSEHGEKAPNVVYKGLVDE--DRWIAVK--RFNRSAWPDSRQ-FLEEARAVGLLRSERL 112
++ HG P ++ +D DR +A+ D Q L + + +
Sbjct: 35 LLIFHGGVPPLQFWQA-LDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGV 93
Query: 113 VNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG 172
++ L+VAE++ +L + + +R LA A D G
Sbjct: 94 ARVLDVVHTRAGGLVVAEWIRGGSLQEVA----DTSPSPVGAIRAMQSLAAAADAAHRAG 149
Query: 173 RALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESV 231
+ + R+ DG+ L+ M P+
Sbjct: 150 --VALSIDHPSRVRVSIDGDVVLAYPATM-----------------------PDANPQDD 184
Query: 232 VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT----------- 280
+ G L LL + P + S L + G
Sbjct: 185 IRGIGASLYALLVNR--WPLPEAGV----------RSGLAPAERDTAGQPIEPADIDRDI 232
Query: 281 --ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317
++ +A+R +Q + R A +L+ + A+
Sbjct: 233 PFQISAVAARSVQGDGGIRS-ASTLLNLMQQATAVADRT 270
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 4e-08
Identities = 42/244 (17%), Positives = 86/244 (35%), Gaps = 19/244 (7%)
Query: 70 VYKGL-VDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126
++ R +K N S + E + ++ +V E
Sbjct: 40 AILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY 99
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
+V ++ L K + + + + + + AL + + + L+ D+ + I
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFL 158
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDL 242
+DG +L FG+ + + TP PE +S +++ G +L +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 243 LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPN 299
+ K A + L+ + G F S +L L S+ + PR+RP+
Sbjct: 219 CTLK--HAFEA------GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270
Query: 300 AKSL 303
S+
Sbjct: 271 VNSI 274
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 6e-08
Identities = 60/291 (20%), Positives = 98/291 (33%), Gaps = 51/291 (17%)
Query: 70 VYKGLV------DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRS-ERLVNLIGCCCE 121
V +AVK A R+ + E + + L S E +VNL+G C
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120
Query: 122 GEERLLVAEFMPN-----------ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS- 169
L+ E+ E S+ +ENQ L L +
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180
Query: 170 -SKGRALY-------H-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF--- 215
+KG + H DL +L ++ FGL ++ +Y N
Sbjct: 181 VAKGME-FLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK 239
Query: 216 -TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP------PSHALDLIRGKNFLMLMDS 268
PE L G +S V+S+G LL ++ S P ++ LI+ +
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFY 299
Query: 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSY 319
E E+ + C ++ R+RP+ +L + L +AE Y
Sbjct: 300 ATE---------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMY 341
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 8e-08
Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 20/194 (10%)
Query: 69 VVYKGLVDE--DRWIAVKRFNRSAWPDSRQFLE----EARAVGLLRSERLVNLIGCCCEG 122
VY D + +A+K + + L+ E L + +V++I E
Sbjct: 26 TVYLAE-DTILNIKVAIKAI-FIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED 83
Query: 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNT 181
+ LV E++ TLS+++ + P+ + + + + + H D+
Sbjct: 84 DCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKP 139
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF-TP----PEYLRTGRVIPESVVYSFG 236
IL D + ++ FG+ K + TN T PE + + +YS G
Sbjct: 140 QNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIG 199
Query: 237 TLLLDLLSGKHIPP 250
+L ++L G+ PP
Sbjct: 200 IVLYEMLVGE--PP 211
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 8e-08
Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 19/154 (12%)
Query: 161 LAQALDYCSSKGRALYH----DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 216
L AL C + + DL + D N +L FGL + S++ T
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGT 179
Query: 217 P----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
P PE + +S ++S G LL +L + PP + L EG
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PP------FTAFSQKELAGKIREG 231
Query: 273 HF---SNDDGTELVRLASRCLQYEPRERPNAKSL 303
F EL + +R L + RP+ + +
Sbjct: 232 KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 9e-08
Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 443
K+ G+ A++ KDF TA++ Y + + PT + Y + +
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKE----LDPTNMTYITNQAAVYFEKGDYNKCRELCEK 63
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 477
A + + + A A +G + +E KD
Sbjct: 64 AIEVGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 9e-08
Identities = 52/282 (18%), Positives = 93/282 (32%), Gaps = 47/282 (16%)
Query: 70 VYKGLV------DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRS-ERLVNLIGCCC- 120
V + R +AVK A + R + E + + + +VNL+G C
Sbjct: 43 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102
Query: 121 EGEERLLVAEFMPNETLSKHL--------------FHWENQPMKWAMRVRVALYLAQALD 166
G +++ EF LS +L + + + +A+ ++
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162
Query: 167 YCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY--STNLAF----TPPE 219
+ +S+ H DL IL + ++ FGL ++ Y + PE
Sbjct: 163 FLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGH 273
+ +S V+SFG LL ++ S P ++ + D
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-- 278
Query: 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315
E+ + C EP +RP LV L L +
Sbjct: 279 -------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 52/267 (19%), Positives = 92/267 (34%), Gaps = 50/267 (18%)
Query: 82 AVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLLVAEFMPNETL 137
A+KR D + EA L ++ L+ C E L+ F TL
Sbjct: 58 ALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTL 117
Query: 138 SKHLFHW--------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQ 188
+ E+Q + + + + L+ +KG H DL IL
Sbjct: 118 WNEIERLKDKGNFLTEDQILWLLLGI------CRGLEAIHAKG--YAHRDLKPTNILLGD 169
Query: 189 DGNPRLSCFGLMKNSR-------------DGKSYSTNLAFTPPE--YLRTGRVIPESV-V 232
+G P L G M + D + +++ PE +++ VI E V
Sbjct: 170 EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDV 229
Query: 233 YSFGTLLLDLLSGKH-----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287
+S G +L ++ G+ ++ L + S+ L +L +
Sbjct: 230 WSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSP----RHSSA----LWQLLN 281
Query: 288 RCLQYEPRERPNAKSLVASLTPLQKEA 314
+ +P +RP+ L++ L LQ A
Sbjct: 282 SMMTVDPHQRPHIPLLLSQLEALQPPA 308
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 44/273 (16%), Positives = 80/273 (29%), Gaps = 34/273 (12%)
Query: 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI 116
IV K + D + + + N +
Sbjct: 65 GIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTV 124
Query: 117 GCCCEGEERLL---VAEFMPNETLSKHLFHWENQPMKWAMRVRVALY----LAQALDYCS 169
G ++ + E L + + V L+ +A+A+++
Sbjct: 125 GQLQPSSPKVYLYIQMQLCRKENLKDWM---NRRCSLEDREHGVCLHIFIQIAEAVEFLH 181
Query: 170 SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVI-- 227
SKG ++ DL I F D ++ FGL+ + T L P TG+V
Sbjct: 182 SKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240
Query: 228 ----PESV----------VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 273
PE + ++S G +L +LL I + +
Sbjct: 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSF--STQMERVRIITD----VRNLKFPLL 294
Query: 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306
F+ + + L P ERP A ++ +
Sbjct: 295 FTQKY-PQEHMMVQDMLSPSPTERPEATDIIEN 326
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 42/271 (15%), Positives = 77/271 (28%), Gaps = 55/271 (20%)
Query: 69 VVYKGLVDEDRWI-AVKRFNRSAWPDS--RQFLEEARAV-GLLRSERLVNLIGCCCEGEE 124
V+K + D I A+KR + + L E A L + +V E +
Sbjct: 26 SVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH 85
Query: 125 RLLVAEFMPNETLSKHL--FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNT 181
L+ E+ +L+ + + K A + L + + L Y S L H D+
Sbjct: 86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKP 143
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA-F--------------TP----PEYLR 222
I + P + ++ + E
Sbjct: 144 SNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANE--- 200
Query: 223 TGRVIPESVVY-------SFGTLLLDLLSGKHIPPSHALDL---IRGKNFLMLMDSCLEG 272
V+ E+ + + ++ + P D IR +
Sbjct: 201 ---VLQENYTHLPKADIFALALTVVCAAGAE--PLPRNGDQWHEIRQGRL-----PRIPQ 250
Query: 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
S E L + +P RP+A +L
Sbjct: 251 VLSQ----EFTELLKVMIHPDPERRPSAMAL 277
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 36/182 (19%), Positives = 69/182 (37%), Gaps = 18/182 (9%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLNTYRIL 185
+ EF TL + + + + + + + + + +DY SK L + DL I
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIF 154
Query: 186 FDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLD 241
++ FGL+ + ++ + + T PE + + E +Y+ G +L +
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILAE 213
Query: 242 LLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 301
LL A + K F L D + F + L + L +P +RPN
Sbjct: 214 LLH----VCDTAFE--TSKFFTDLRDGIISDIFDK----KEKTLLQKLLSKKPEDRPNTS 263
Query: 302 SL 303
+
Sbjct: 264 EI 265
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 3e-07
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTV---FARRCLCYLLSDMPQEALGDAMQ 443
K G+AA++ KDF A Y I+ + P+ + + Y E + +
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIE----LDPSNITFYNNKAAVYFEEKKFAECVQFCEK 67
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 477
A + + + L A A+ G Q L
Sbjct: 68 AVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSL 101
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 4e-07
Identities = 54/262 (20%), Positives = 94/262 (35%), Gaps = 51/262 (19%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIG--CCCEGEER 125
+VY+G+ D +R +AVKR + + + E V LLR S+ N+I C + +
Sbjct: 40 IVYRGMFD-NRDVAVKRILPECFSFADR---E---VQLLRESDEHPNVIRYFCTEKDRQF 92
Query: 126 L-LVAEFMPNE----TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL 179
+ E K H +P+ ++ L + S + H DL
Sbjct: 93 QYIAIELCAATLQEYVEQKDFAHLGLEPIT-LLQ-----QTTSGLAHLHSLN--IVHRDL 144
Query: 180 NTYRILF---DQDGNPR--LSCFGLMKNSRDGKSYSTNLAF---TP----PEYLR---TG 224
+ IL + G + +S FGL K G+ + + T PE L
Sbjct: 145 KPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKE 204
Query: 225 RVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279
++S G + ++S P A L+ + L H +
Sbjct: 205 NPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCL-------HPEKHED 257
Query: 280 TELVRLASRCLQYEPRERPNAK 301
L + + +P++RP+AK
Sbjct: 258 VIARELIEKMIAMDPQKRPSAK 279
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 7e-07
Identities = 49/256 (19%), Positives = 95/256 (37%), Gaps = 37/256 (14%)
Query: 70 VYKGLVDED-RWIAVKRFNRSAWPDSR---QFLEEARAVGLLRSERLVNLIGCCCEGEER 125
VY+ D +A+K+ D++ ++E + L ++ E E
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107
Query: 126 LLVAEFMPNETLSKHL--FHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYH-DL 179
+V E LS+ + F + + + V Y Q AL++ S+ + H D+
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPER---TVWKYFVQLCSALEHMHSRR--VMHRDI 162
Query: 180 NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSF 235
+ G +L GL + + + +L TP PE + +S ++S
Sbjct: 163 KPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 222
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--------HFSNDDGTELVRLAS 287
G LL ++ + + P + N L + H+S EL +L +
Sbjct: 223 GCLLYEMAALQ--SPFYG----DKMNLYSLCKKIEQCDYPPLPSDHYSE----ELRQLVN 272
Query: 288 RCLQYEPRERPNAKSL 303
C+ +P +RP+ +
Sbjct: 273 MCINPDPEKRPDVTYV 288
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 49/262 (18%), Positives = 85/262 (32%), Gaps = 56/262 (21%)
Query: 70 VYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V++ AVK+ R EE A L S R+V L G EG +
Sbjct: 74 VHRMKDKQTGFQCAVKKVRL---EVFRV--EELVACAGLSSPRIVPLYGAVREGPWVNIF 128
Query: 129 AEFMPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYHDLNT 181
E + +L + + E++ YL Q L+Y ++ L+ D+
Sbjct: 129 MELLEGGSLGQLIKQMGCLPEDR---------ALYYLGQALEGLEYLHTRR-ILHGDVKA 178
Query: 182 YRILFDQDGNP-RLSCFGLMKNSRDGKSYSTNLAF-----TP----PEYLRTGRVIPESV 231
+L DG+ L FG + + L T PE V+
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE------VVMGKP 232
Query: 232 ------VYSFGTLLLDLLSGKH----IPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281
++S ++L +L+G H I + + + + +
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIRE---IPPSCA-PLTAQ 288
Query: 282 LVRLASRCLQYEPRERPNAKSL 303
++ L+ EP R +A L
Sbjct: 289 AIQ---EGLRKEPVHRASAMEL 307
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 56/272 (20%), Positives = 96/272 (35%), Gaps = 31/272 (11%)
Query: 63 GEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
GE + +V R +AVK + E + + +V +
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
GEE ++ EF+ L+ + + V + QAL Y ++G ++ D+ +
Sbjct: 114 GEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQGV-IHRDIKS 169
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG +LS FG +L TP PE + E ++S G
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 238 LLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293
++++++ G+ P A+ +R L +S S L R L +
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS---HKVSP----VLRDFLERMLVRD 282
Query: 294 PRERPNAKSL-----------VASLTPLQKEA 314
P+ER A+ L L PL +
Sbjct: 283 PQERATAQELLDHPFLLQTGLPECLVPLIQLY 314
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 52/259 (20%), Positives = 93/259 (35%), Gaps = 43/259 (16%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
+VY G + IA+K S+ EE L+ + +V +G E +
Sbjct: 37 IVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI 96
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT-YR--- 183
E +P +LS L + P+K + + Y Q L +G HD +R
Sbjct: 97 FMEQVPGGSLSA-LLRSKWGPLKDNEQT-IGFYTKQIL-----EGLKYLHDNQIVHRDIK 149
Query: 184 ---ILFDQ-DGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV---- 231
+L + G ++S FG K + T PE +I +
Sbjct: 150 GDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPE------IIDKGPRGYG 203
Query: 232 ----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC---LEGHFSNDDGTELVR 284
++S G ++++ +GK PP + L + F + M + S + +
Sbjct: 204 KAADIWSLGCTIIEMATGK--PPFYELGEPQAAMFKVGMFKVHPEIPESMS-AEAKAFIL 260
Query: 285 LASRCLQYEPRERPNAKSL 303
+C + +P +R A L
Sbjct: 261 ---KCFEPDPDKRACANDL 276
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 31/272 (11%)
Query: 63 GEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
G+ A VY + V + +A+++ N P + E + ++ +VN +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
G+E +V E++ +L+ + M V QAL++ S ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQV-IHRDIKS 144
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG+ +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 238 LLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293
+ ++++ G+ + P AL LI L + S +RCL+ +
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP---EKLSA----IFRDFLNRCLEMD 257
Query: 294 PRERPNAKSL-----------VASLTPLQKEA 314
+R +AK L ++SLTPL A
Sbjct: 258 VEKRGSAKELLQHQFLKIAKPLSSLTPLIAAA 289
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 21/178 (11%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYH-DLNTY 182
L+ E+ P T+ + L Q + R A Y+ + AL YC SK + H D+
Sbjct: 86 LILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPE 138
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESV-VYSFGTLL 239
+L G +++ FG ++ + L + PPE + GR+ E V ++S G L
Sbjct: 139 NLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLC 197
Query: 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+ L GK PP A + ++ + L SR L++ P +R
Sbjct: 198 YEFLVGK--PPFEANTYQETYKRISRVEFTFPDFVTEG----ARDLISRLLKHNPSQR 249
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 2e-06
Identities = 54/301 (17%), Positives = 101/301 (33%), Gaps = 65/301 (21%)
Query: 69 VVYKGLVDE---DRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEE 124
+Y +D R + +K S +++ + E + + + +V + E
Sbjct: 95 WIYLA-LDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNF---VEH 150
Query: 125 RL--------LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
+V E++ ++L + Q + A + L + AL Y S G +Y
Sbjct: 151 TDRHGDPVGYIVMEYVGGQSLKRSK----GQKLPVAEAIAYLLEILPALSYLHSIG-LVY 205
Query: 177 HDL---NTYRILFDQDGNPRLSCFGLMKN-SRDGKSYSTNLAFTPPEYLRTGRVIPESVV 232
+DL N I+ ++ +L G + + G Y T F PE +R + +
Sbjct: 206 NDLKPEN---IMLTEEQ-LKLIDLGAVSRINSFGYLYGT-PGFQAPEIVR-TGPTVATDI 259
Query: 233 YSFGTLLLDLLSG---------KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283
Y+ G L L +P +
Sbjct: 260 YTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYD---------------------SYG 298
Query: 284 RLASRCLQYEPRERP-NAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGE 342
RL R + +PR+R A+ + A LT + +E G+P ST + + + G
Sbjct: 299 RLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDT---GVPRPGLSTIFSPSRSTFGV 355
Query: 343 A 343
Sbjct: 356 D 356
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 24/195 (12%)
Query: 70 VYKGLVDE--DRWIAVK--RFNRSAWPDSRQ-FLEEARAVGLLRSERLVNL--IGCCCEG 122
VY+ D +R +A+K S+ P R EAR G L+ +V + G E
Sbjct: 50 VYEA-EDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG---EI 105
Query: 123 EERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLN 180
+ +L + + L+ L P+ V + + ALD + G H D+
Sbjct: 106 DGQLYVDMRLINGVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVK 161
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSF 235
IL D L FG+ + D K L + PE + +Y+
Sbjct: 162 PENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYAL 221
Query: 236 GTLLLDLLSGKHIPP 250
+L + L+G PP
Sbjct: 222 TCVLYECLTGS--PP 234
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 2e-06
Identities = 42/222 (18%), Positives = 70/222 (31%), Gaps = 46/222 (20%)
Query: 119 CCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH- 177
C+G+ + EF+ L + +K + +A+ + + + H
Sbjct: 115 LCKGQ----LVEFLKKMESRGPL--SCDTVLKIFYQT------CRAVQHMHRQKPPIIHR 162
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF------------TP----PE-- 219
DL +L G +L FG YS + TP PE
Sbjct: 163 DLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII 222
Query: 220 YLRTGRVIPESV-VYSFGTLLLDLLSGKHIPP---SHALDLIRGKNFLMLMDSCLEGHFS 275
L + I E +++ G +L L +H P L ++ GK + +
Sbjct: 223 DLYSNFPIGEKQDIWALGCILYLLCFRQH--PFEDGAKLRIVNGK-YSIPPHD----TQY 275
Query: 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317
T L LQ P ER + +V L + V
Sbjct: 276 ----TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 3e-06
Identities = 42/197 (21%), Positives = 68/197 (34%), Gaps = 25/197 (12%)
Query: 112 LVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDY 167
+V + ++L + + M L HL + Y A+ L++
Sbjct: 254 IVCMS-YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEH 307
Query: 168 CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRT 223
++ +Y DL IL D+ G+ R+S GL + K ++ T PE L+
Sbjct: 308 MHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--SVGTHGYMAPEVLQK 364
Query: 224 GRVIPESVVY-SFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGT 280
G S + S G +L LL G P K+ + L +
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDRMTLTMAVELPDSFSP 419
Query: 281 ELVRLASRCLQYEPRER 297
EL L LQ + R
Sbjct: 420 ELRSLLEGLLQRDVNRR 436
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 3e-06
Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 18/141 (12%)
Query: 357 EKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYT--------- 407
E + ++ + + + + +++Q + K+ G+ F+ + AI Y
Sbjct: 15 ENLYFQGAKKSIYDYTDE---EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT 71
Query: 408 ------HFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461
+D + + CY + +A+ A + I + A Y A
Sbjct: 72 EEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVA 131
Query: 462 LFGLGMNNDAQETLKDGTNLE 482
G +A+E L +L
Sbjct: 132 NMYFGFLEEAKENLYKAASLN 152
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 5e-06
Identities = 48/268 (17%), Positives = 96/268 (35%), Gaps = 53/268 (19%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLR-----SERLVNLIGCCCE 121
V++ L ++ + A+K N + + E + L S++++ L
Sbjct: 43 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNE---IAYLNKLQQHSDKIIRLYDYE-I 98
Query: 122 GEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYH 177
++ + +V E + L+ L ++ Y A+ G + H
Sbjct: 99 TDQYIYMVMECGNID-LNSWLKKKKSIDPWERKS-----YWKNMLEAVHTIHQHG--IVH 150
Query: 178 -DL---NTYRILFDQDGNPRLSCFGLMKNSRDGKS--YSTNLAFTP----PEYLR----- 222
DL N L DG +L FG+ + + + T PE ++
Sbjct: 151 SDLKPAN---FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 223 ------TGRVIPESVVYSFGTLLLDLLSGKHIPP-SHALDLIRGKNFLMLMDSCLEGHFS 275
++ P+S V+S G +L + GK P ++ I ++D E F
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDPNHEIEFP 262
Query: 276 NDDGTELVRLASRCLQYEPRERPNAKSL 303
+ +L + CL+ +P++R + L
Sbjct: 263 DIPEKDLQDVLKCCLKRDPKQRISIPEL 290
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 6e-06
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP---TVFARRCLCYLLSDMPQEALGDAMQ 443
K RG+ F AK+F AI+ Y + I+ + P ++ CY+ + ++ + +
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIE----LDPNEPVFYSNISACYISTGDLEKVIEFTTK 84
Query: 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 476
A I PD A +A+A LG DA L
Sbjct: 85 ALEIKPDHSKALLRRASANESLGNFTDAMFDLS 117
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 7e-04
Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 6/89 (6%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFA--RRCLCYLLSDMPQEALGDAMQA 444
G F + A I+ + PT + L + QE +A
Sbjct: 247 CYTGIFHFLKNNLLDAQVLLQESIN----LHPTPNSYIFLALTLADKENSQEFFKFFQKA 302
Query: 445 QVISPDWPTAFYLQAAALFGLGMNNDAQE 473
++P++P +Y + F L +A+E
Sbjct: 303 VDLNPEYPPTYYHRGQMYFILQDYKNAKE 331
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 6e-06
Identities = 46/199 (23%), Positives = 73/199 (36%), Gaps = 26/199 (13%)
Query: 70 VYKGLVDE--DRWIAVKRFNRSAWPDSRQFLE----EARAVGLLRSERLVNL--IGCCCE 121
V+ D R +AVK R+ F EA+ L +V + G
Sbjct: 28 VHLA-RDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET 85
Query: 122 GEERL--LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-D 178
L +V E++ TL + PM + V QAL++ G + H D
Sbjct: 86 PAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG--IIHRD 141
Query: 179 LNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESV 231
+ I+ ++ FG+ + D + T + PE R V S
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 232 VYSFGTLLLDLLSGKHIPP 250
VYS G +L ++L+G+ PP
Sbjct: 202 VYSLGCVLYEVLTGE--PP 218
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 8e-06
Identities = 27/263 (10%), Positives = 61/263 (23%), Gaps = 41/263 (15%)
Query: 69 VVYKGLVDEDR------WIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG 122
VY+ + +K + + + + +
Sbjct: 80 QVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139
Query: 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRA----- 174
+LV E TL + ++N P K + V + + ++
Sbjct: 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIK 199
Query: 175 -----LYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEY----L 221
L + D L G S D K + FT + +
Sbjct: 200 PDNFILGNGFLEQDDEDDLSAGLALIDLGQ---SIDMKLFPKGTIFTAKCETSGFQCVEM 256
Query: 222 RTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280
+ + + + + +L G ++ ++ + + D
Sbjct: 257 LSNKPWNYQIDYFGVAATVYCMLFGTYMK-------VKNEGGECKPEGLFRRLPHLDMWN 309
Query: 281 ELVRLASRCLQYEPRERPNAKSL 303
E L + L
Sbjct: 310 EFFH---VMLNIPDCHHLPSLDL 329
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 8e-06
Identities = 14/119 (11%), Positives = 39/119 (32%), Gaps = 14/119 (11%)
Query: 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYT---HFIDGGTMVSPTVFAR----------- 423
++++++ K+RG F+ + A+ Y +++ + S +
Sbjct: 142 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLN 201
Query: 424 RCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLE 482
+C+L A+ +A + + + A + A+ + L
Sbjct: 202 LAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLY 260
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 23/148 (15%)
Query: 161 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST---NLAFT 216
+ A+ YC K + H DL +L D D N +++ FG G +
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 217 PPEYLR----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PE + G PE V+S G +L L+SG +P G+N L + L G
Sbjct: 181 APELFQGKKYDG---PEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRG 229
Query: 273 HFSNDDG--TELVRLASRCLQYEPRERP 298
+ T+ L R L P +R
Sbjct: 230 KYRIPFYMSTDCENLLKRFLVLNPIKRG 257
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 40/184 (21%), Positives = 67/184 (36%), Gaps = 33/184 (17%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYH-DLNTY 182
L+ EF P L K L Q R A ++ + AL YC + + H D+
Sbjct: 91 LMLEFAPRGELYKEL-----QKHGRFDEQRSATFMEELADALHYCHERK--VIHRDIKPE 143
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESV-VYSFGTLL 239
+L G +++ FG ++ + + L + PPE + G+ E V ++ G L
Sbjct: 144 NLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIE-GKTHDEKVDLWCAGVLC 202
Query: 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG------HFSNDDGTELVRLASRCLQYE 293
+ L G PP + + + S L S+ L+Y
Sbjct: 203 YEFLVGM--PPFDS------PSHTETHRRIVNVDLKFPPFLS----DGSKDLISKLLRYH 250
Query: 294 PRER 297
P +R
Sbjct: 251 PPQR 254
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 161 LAQALDYCSSKGRALYH-DL---NTYRILFDQD-GNPRLSCFGLMKNSRDGKSYST---N 212
+ +A+ +C + G + H D+ N IL D + G +L FG +D Y+
Sbjct: 158 VLEAVRHCHNCG--VLHRDIKDEN---ILIDLNRGELKLIDFGSGALLKDTV-YTDFDGT 211
Query: 213 LAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE 271
++PPE++R R + V+S G LL D++ G IP H ++IRG+ F
Sbjct: 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG-DIPFEHDEEIIRGQVFF-------R 263
Query: 272 GHFSNDDGTELVRLASRCLQYEPRERP 298
S +E L CL P +RP
Sbjct: 264 QRVS----SECQHLIRWCLALRPSDRP 286
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 57/269 (21%), Positives = 96/269 (35%), Gaps = 35/269 (13%)
Query: 63 GEKAPNVVYKGL-VDEDRWIAVKRFN-RSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC 120
G A VV + +A+KR N + L+E +A+ +V+
Sbjct: 24 GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV 83
Query: 121 EGEERLLVAEFMPN---ETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRA 174
+E LV + + + KH+ +A L + L+Y G+
Sbjct: 84 VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ- 142
Query: 175 LYHDLNTYRILFDQDGNPRLSCFGL---MKNSRDGKSYSTNLAF--TP----PEYLRTGR 225
++ D+ IL +DG+ +++ FG+ + D F TP PE
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE------ 196
Query: 226 VIPESVVY-------SFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEGHF 274
V+ + Y SFG ++L +G PP L L + L +
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEM 256
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSL 303
G ++ S CLQ +P +RP A L
Sbjct: 257 LKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 41/262 (15%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLR--SERLVNLIGCCCEGEE 124
V++ L ++ + A+K N + + E + L+ S++++ L ++
Sbjct: 71 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-ITDQ 129
Query: 125 RL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYH-DL 179
+ +V E + L+ L ++ Y A+ G + H DL
Sbjct: 130 YIYMVMECGNID-LNSWLKKKKSIDPWERKS-----YWKNMLEAVHTIHQHG--IVHSDL 181
Query: 180 NTYRILFDQDGNPRLSCFGLMKNSRDGKS--YSTNLAFTP----PEYLR----------- 222
L DG +L FG+ + + + PE ++
Sbjct: 182 KPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKS 240
Query: 223 TGRVIPESVVYSFGTLLLDLLSGKHIPP-SHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281
++ P+S V+S G +L + GK P ++ I ++D E F + +
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDPNHEIEFPDIPEKD 296
Query: 282 LVRLASRCLQYEPRERPNAKSL 303
L + CL+ +P++R + L
Sbjct: 297 LQDVLKCCLKRDPKQRISIPEL 318
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 6/89 (6%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP--TVFARRCLCYLLSDMPQEALGDAMQA 444
K G+ ++A+ F AIE Y + + T R + A+ A
Sbjct: 9 KAEGNKFYKARQFDEAIEHYNKAWE----LHKDITYLNNRAAAEYEKGEYETAISTLNDA 64
Query: 445 QVISPDWPTAFYLQAAALFGLGMNNDAQE 473
+ + + + + +G
Sbjct: 65 VEQGREMRADYKVISKSFARIGNAYHKLG 93
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 9/92 (9%)
Query: 389 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFAR----RCLCYLLSDMPQEALGDAMQA 444
G F D+P A++ YT I +P AR R EA+ D +A
Sbjct: 145 EGKEYFTKSDWPNAVKAYTEMIK----RAPE-DARGYSNRAAALAKLMSFPEAIADCNKA 199
Query: 445 QVISPDWPTAFYLQAAALFGLGMNNDAQETLK 476
P++ A+ +A A + A ETL
Sbjct: 200 IEKDPNFVRAYIRKATAQIAVKEYASALETLD 231
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 27/147 (18%)
Query: 161 LAQALDYCSSKGRALYH-DL---NTYRILFDQD-GNPRLSCFGLMKNSRDGKSYST---N 212
+ A+ +C S+G + H D+ N IL D G +L FG D Y+
Sbjct: 148 VVAAIQHCHSRG--VVHRDIKDEN---ILIDLRRGCAKLIDFGSGALLHDEP-YTDFDGT 201
Query: 213 LAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE 271
++PPE++ + + V+S G LL D++ G IP +++ +
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCG-DIPFERDQEILEAELHF-------P 253
Query: 272 GHFSNDDGTELVRLASRCLQYEPRERP 298
H S + L RCL +P RP
Sbjct: 254 AHVS----PDCCALIRRCLAPKPSSRP 276
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 2e-05
Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 17/122 (13%)
Query: 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYT---HFIDGGTMVSP--------------TV 420
D+++ +++G+ F KD+ AI+ Y +D + +
Sbjct: 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPL 65
Query: 421 FARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTN 480
+A CYL EA + + A + +A A ++A+E LK
Sbjct: 66 YANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125
Query: 481 LE 482
Sbjct: 126 NH 127
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 25/153 (16%)
Query: 112 LVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDY 167
+V+L E + L LV M + H+++ + + R Y AQ L++
Sbjct: 247 IVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-RAIFYTAQIVSGLEH 304
Query: 168 CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVI 227
+ +Y DL +L D DGN R+S GL + G++ + A T P ++
Sbjct: 305 LHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT-PGFM-----A 357
Query: 228 PESVVY----------SFGTLLLDLLSGKHIPP 250
PE ++ + G L ++++ + P
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR--GP 388
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 45/204 (22%), Positives = 74/204 (36%), Gaps = 36/204 (17%)
Query: 112 LVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDY 167
+V+L E ++ L LV M L H++H A R Y A+ L+
Sbjct: 246 VVSLA-YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFYAAEICCGLED 301
Query: 168 CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF--TPPEYLRTGR 225
+ +Y DL IL D G+ R+S GL + +G++ T Y+
Sbjct: 302 LHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG---RVGT-VGYM---- 352
Query: 226 VIPESVVY----------SFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--H 273
PE V + G LL ++++G+ P + + E
Sbjct: 353 -APEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK--KKIKREEVERLVKEVPEE 407
Query: 274 FSNDDGTELVRLASRCLQYEPRER 297
+S + L S+ L +P ER
Sbjct: 408 YSERFSPQARSLCSQLLCKDPAER 431
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 42/175 (24%), Positives = 65/175 (37%), Gaps = 26/175 (14%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQ-PMK 150
+ F EE + + L + E L LV E+ L L + + P +
Sbjct: 104 EVSCFREERDVLVNGDRRWITQLH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE 162
Query: 151 WAMRVRVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL-MKNSRDG 206
A YLA+ A+D G ++ D+ IL D+ G+ RL+ FG +K DG
Sbjct: 163 MA-----RFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216
Query: 207 KSYSTNLAFTP----PEYLRTGRVIPESVVY-------SFGTLLLDLLSGKHIPP 250
S TP PE L+ P + Y + G ++ G+ P
Sbjct: 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ--TP 269
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 25/158 (15%)
Query: 156 RVALYLAQ---ALDYCSSKGRALYHDL---NTYRILFDQDGNPRLSCFGLMKNSRDGKSY 209
V +Y+ + AL++ G +Y D+ N IL D +G+ L+ FGL K ++
Sbjct: 160 EVQIYVGEIVLALEHLHKLG-IIYRDIKLEN---ILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 210 STNLAF--TP----PEYLRTGRVIPESVV--YSFGTLLLDLLSGKHIPPSHALDLIRGKN 261
F T P+ +R G + V +S G L+ +LL+G P +
Sbjct: 216 RAY-DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDG--EKNS 270
Query: 262 FLMLMDSCLEG--HFSNDDGTELVRLASRCLQYEPRER 297
+ L+ + + L R L +P++R
Sbjct: 271 QAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 4e-05
Identities = 48/265 (18%), Positives = 97/265 (36%), Gaps = 47/265 (17%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLR--SERLVNLIGCCCEGEE 124
V++ L ++ + A+K N + + E + L+ S++++ L ++
Sbjct: 24 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-ITDQ 82
Query: 125 RL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYH-DL 179
+ +V E + L+ L ++ Y A+ G + H DL
Sbjct: 83 YIYMVMECGNID-LNSWLKKKKSIDPWERKS-----YWKNMLEAVHTIHQHG--IVHSDL 134
Query: 180 ---NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF--TP----PEYLR-------- 222
N L DG +L FG+ + + + T PE ++
Sbjct: 135 KPAN---FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 190
Query: 223 ---TGRVIPESVVYSFGTLLLDLLSGKHIPP-SHALDLIRGKNFLMLMDSCLEGHFSNDD 278
++ P+S V+S G +L + GK P ++ I ++D E F +
Sbjct: 191 GKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQI--SKLHAIIDPNHEIEFPDIP 246
Query: 279 GTELVRLASRCLQYEPRERPNAKSL 303
+L + CL+ +P++R + L
Sbjct: 247 EKDLQDVLKCCLKRDPKQRISIPEL 271
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 4e-05
Identities = 35/206 (16%), Positives = 67/206 (32%), Gaps = 46/206 (22%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRV---RVALYLAQ---ALDYCSSKGRALYH-DL 179
++ E+M N+++ K ++ + + + + + Y ++ + + H D+
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE-KNICHRDV 178
Query: 180 ---NTYRILFDQDGNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVI--PESVV 232
N IL D++G +LS FG + D K + F PPE+ + +
Sbjct: 179 KPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDI 235
Query: 233 YSFGTLLLDLLSGK---------------------HIPPSHALDLIRGKNFLMLMDSCLE 271
+S G L + P L N +C
Sbjct: 236 WSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTN---KKSTCSN 292
Query: 272 GHFSNDDGTELVRLASRCLQYEPRER 297
SN+ + L+ P ER
Sbjct: 293 NFLSNE----DIDFLKLFLRKNPAER 314
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 5e-05
Identities = 55/275 (20%), Positives = 90/275 (32%), Gaps = 56/275 (20%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA-RAVGLLR-SERLVNLIG--CCCEGEE 124
VV++G R +AVKR F + A + LL S+ N+I C +
Sbjct: 31 VVFQGSFQ-GRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNVIRYYCSETTDR 82
Query: 125 RL-LVAEFMPNE----TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-D 178
L + E SK++ + K + + +A + + S + H D
Sbjct: 83 FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRD 140
Query: 179 LNTYRILFD-------------QDGNPRLSCFGLMKNSRDGKSYSTNLAFTP-------- 217
L IL ++ +S FGL K G+S P
Sbjct: 141 LKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRA 200
Query: 218 PEYLRTGRVIPESVVY-------SFGTLLLDLLSGKHIPPSHALD----LIRGKNFLMLM 266
PE L + S G + +LS P +IRG L M
Sbjct: 201 PELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEM 260
Query: 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 301
+ + T+L+ + + ++P +RP A
Sbjct: 261 KCLHDRSLI-AEATDLIS---QMIDHDPLKRPTAM 291
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 6e-05
Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 42/205 (20%)
Query: 112 LVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDY 167
L L + +RL V E+ L HL + R Y A+ ALDY
Sbjct: 210 LTALK-YSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSALDY 263
Query: 168 CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNLAF--TPPEYLRTG 224
S+ +Y DL ++ D+DG+ +++ FGL K +DG + T F T PEYL
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEYL--- 316
Query: 225 RVIPESVVY----------SFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG-- 272
PE + G ++ +++ G+ P ++ L + L
Sbjct: 317 --APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELILMEEI 366
Query: 273 HFSNDDGTELVRLASRCLQYEPRER 297
F G E L S L+ +P++R
Sbjct: 367 RFPRTLGPEAKSLLSGLLKKDPKQR 391
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 6e-05
Identities = 11/92 (11%), Positives = 26/92 (28%), Gaps = 7/92 (7%)
Query: 388 KRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFA---RRCLCYLLSDMPQEALGDAMQA 444
G ++A + A + + + C + ++AL
Sbjct: 23 ALGFNQYQAGKWDDAQKIFQALCM----LDHYDARYFLGLGACRQSLGLYEQALQSYSYG 78
Query: 445 QVISPDWPTAFYLQAAALFGLGMNNDAQETLK 476
++ + P + A LG + A+
Sbjct: 79 ALMDINEPRFPFHAAECHLQLGDLDGAESGFY 110
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 156 RVALYLAQ---ALDYCSSKGRALYHDL---NTYRILFDQDGNPRLSCFGLMKNSRDGKSY 209
V L++ + ALDY ++ ++ D+ N IL D+ G+ ++ F +
Sbjct: 116 TVKLFICELVMALDYLQNQR-IIHRDMKPDN---ILLDEHGHVHITDFNIAAMLPRETQI 171
Query: 210 STNLAFTP----PEYLRTGRVIPESVV---YSFGTLLLDLLSGKHIPPSHALDLIRGKNF 262
+T +A T PE + + S +S G +LL G+ P H +
Sbjct: 172 TT-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR--RPYHIRS---STSS 225
Query: 263 LMLMDSCLEG--HFSNDDGTELVRLASRCLQYEPRER 297
++ + + + E+V L + L+ P +R
Sbjct: 226 KEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 37/161 (22%), Positives = 54/161 (33%), Gaps = 34/161 (21%)
Query: 156 RVALYLAQ---ALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGL-MKNSRDGK 207
YL Q Y + H DL N + ++D ++ FGL K DG+
Sbjct: 116 EARYYLRQIVLGCQYLHRNR--VIHRDLKLGN---LFLNEDLEVKIGDFGLATKVEYDGE 170
Query: 208 SYSTN---LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL------IR 258
+ PE L E V+S G ++ LL GK PP L I+
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKETYLRIK 228
Query: 259 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ + H + L + LQ +P RP
Sbjct: 229 KNEYSI------PKHIN----PVAASLIQKMLQTDPTARPT 259
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 32/158 (20%)
Query: 161 LAQALDYCSSKGRALYH-DLNTYRILF---DQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 216
+ + Y + H DL +L +D N R+ FGL + K T
Sbjct: 135 VLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD-KIGT 191
Query: 217 P----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PE L G + V+S G +L LLSG PP + G N ++ +G
Sbjct: 192 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGC--PPFN------GANEYDILKKVEKG 242
Query: 273 HFS---------NDDGTELVRLASRCLQYEPRERPNAK 301
++ ++ +L+R + L Y P R +A+
Sbjct: 243 KYTFELPQWKKVSESAKDLIR---KMLTYVPSMRISAR 277
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 31/158 (19%), Positives = 62/158 (39%), Gaps = 32/158 (20%)
Query: 161 LAQALDYCSSKGRALYH-DLNTYRILF---DQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 216
+ + Y + H DL +L ++D ++ FGL + K T
Sbjct: 145 VLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE-RLGT 201
Query: 217 P----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PE LR + + V+S G +L LL+G PP G+ ++ +G
Sbjct: 202 AYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY--PP------FGGQTDQEILRKVEKG 252
Query: 273 HFS---------NDDGTELVRLASRCLQYEPRERPNAK 301
++ ++ +L++ + LQ++ + R +A+
Sbjct: 253 KYTFDSPEWKNVSEGAKDLIK---QMLQFDSQRRISAQ 287
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 37/161 (22%), Positives = 54/161 (33%), Gaps = 34/161 (21%)
Query: 156 RVALYLAQ---ALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGL-MKNSRDGK 207
YL Q Y + H DL N + ++D ++ FGL K DG+
Sbjct: 142 EARYYLRQIVLGCQYLHRNR--VIHRDLKLGN---LFLNEDLEVKIGDFGLATKVEYDGE 196
Query: 208 SYST---NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL------IR 258
+ PE L E V+S G ++ LL GK PP L I+
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKETYLRIK 254
Query: 259 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ + H + L + LQ +P RP
Sbjct: 255 KNEYSI------PKHIN----PVAASLIQKMLQTDPTARPT 285
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 5e-04
Identities = 39/189 (20%), Positives = 68/189 (35%), Gaps = 38/189 (20%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDYCSSKGRALYH-DL--- 179
LV E N ++++L +P ++ Q + Y S G + H DL
Sbjct: 88 LVLEMCHNGEMNRYL-KNRVKPFS---ENEARHFMHQIITGMLYLHSHG--ILHRDLTLS 141
Query: 180 NTYRILFDQDGNPRLSCFGL-MKNSRDGKSYSTN---LAFTPPEYLRTGRVIPESVVYSF 235
N +L ++ N +++ FGL + + + T + PE ES V+S
Sbjct: 142 N---LLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSL 198
Query: 236 GTLLLDLLSGKHIPPSHALDL------IRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289
G + LL G+ PP + + ++ M S E L +
Sbjct: 199 GCMFYTLLIGR--PPFDTDTVKNTLNKVVLADYEM------PSFLS----IEAKDLIHQL 246
Query: 290 LQYEPRERP 298
L+ P +R
Sbjct: 247 LRRNPADRL 255
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 40/208 (19%)
Query: 112 LVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDY 167
LV L C + E RL V E++ L H+ Q + Y A+ AL+Y
Sbjct: 72 LVGLH-SCFQTESRLFFVIEYVNGGDLMFHM-----QRQRKLPEEHARFYSAEISLALNY 125
Query: 168 CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNLAF--TPPEYLRTG 224
+G +Y DL +L D +G+ +L+ +G+ K R G + ST F T P Y+
Sbjct: 126 LHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST---FCGT-PNYI--- 177
Query: 225 RVIPESVVY----------SFGTLLLDLLSGKHIPP---SHALDLIRGKNFLMLMDSCLE 271
PE + + G L+ ++++G+ P + D L LE
Sbjct: 178 --APEILRGEDYGFSVDWWALGVLMFEMMAGR--SPFDIVGSSDNPDQNTEDYLFQVILE 233
Query: 272 G--HFSNDDGTELVRLASRCLQYEPRER 297
+ + L +P+ER
Sbjct: 234 KQIRIPRSLSVKAASVLKSFLNKDPKER 261
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 40/158 (25%), Positives = 56/158 (35%), Gaps = 32/158 (20%)
Query: 161 LAQALDYCSSKGRALYH-DLNTYRILF---DQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 216
+ A+ YC + H DL LF D +L FGL + GK T T
Sbjct: 115 VLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT-KVGT 171
Query: 217 P----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
P P+ L G PE +S G ++ LL G PP +M EG
Sbjct: 172 PYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGY--PPFS------APTDSEVMLKIREG 222
Query: 273 HFS---------NDDGTELVRLASRCLQYEPRERPNAK 301
F+ + L+R R L P++R +
Sbjct: 223 TFTFPEKDWLNVSPQAESLIR---RLLTKSPKQRITSL 257
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 40/164 (24%)
Query: 161 LAQALDYCSSKGRALYH-DL---NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 216
L + + + H DL N IL D D N +L+ FG G+ + T
Sbjct: 133 LLEVICALHKLN--IVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLRE-VCGT 186
Query: 217 P----PEYLRTGRVI------PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM 266
P PE + E ++S G ++ LL+G PP + ++++
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRKQMLML 238
Query: 267 DSCLEGHFS---------NDDGTELVRLASRCLQYEPRERPNAK 301
+ G++ +D +LV R L +P++R A+
Sbjct: 239 RMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKRYTAE 279
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 8e-04
Identities = 47/205 (22%), Positives = 80/205 (39%), Gaps = 43/205 (20%)
Query: 112 LVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDY 167
L L + +RL V E+ L HL + R Y A+ AL+Y
Sbjct: 67 LTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-----RARFYGAEIVSALEY 120
Query: 168 CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNLAF--TPPEYLRTG 224
S+ +Y D+ ++ D+DG+ +++ FGL K DG + T F T PEYL
Sbjct: 121 LHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT---FCGT-PEYL--- 172
Query: 225 RVIPESVVY----------SFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG-- 272
PE + G ++ +++ G+ P + ++ L + L
Sbjct: 173 --APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFY------NQDHERLFELILMEEI 222
Query: 273 HFSNDDGTELVRLASRCLQYEPRER 297
F E L + L+ +P++R
Sbjct: 223 RFPRTLSPEAKSLLAGLLKKDPKQR 247
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 9e-04
Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 40/208 (19%)
Query: 112 LVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ---ALDY 167
LV L C + E RL V E++ L H+ Q + Y A+ AL+Y
Sbjct: 115 LVGLH-SCFQTESRLFFVIEYVNGGDLMFHM-----QRQRKLPEEHARFYSAEISLALNY 168
Query: 168 CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNLAF--TPPEYLRTG 224
+G +Y DL +L D +G+ +L+ +G+ K R G + ST F T P Y+
Sbjct: 169 LHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST---FCGT-PNYI--- 220
Query: 225 RVIPESVVY----------SFGTLLLDLLSGKHIPP---SHALDLIRGKNFLMLMDSCLE 271
PE + + G L+ ++++G+ P + D L LE
Sbjct: 221 --APEILRGEDYGFSVDWWALGVLMFEMMAGR--SPFDIVGSSDNPDQNTEDYLFQVILE 276
Query: 272 G--HFSNDDGTELVRLASRCLQYEPRER 297
+ + L +P+ER
Sbjct: 277 KQIRIPRSLSVKAASVLKSFLNKDPKER 304
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 488 | |||
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.92 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.86 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.85 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.83 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.79 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.78 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.77 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.76 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.75 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.73 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.72 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.72 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.71 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.7 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.65 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.62 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.62 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.62 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.62 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.61 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.61 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.61 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.61 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.6 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.59 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.58 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.58 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.58 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.58 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.58 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.58 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.58 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.58 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.57 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.57 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.57 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.56 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.56 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.56 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.54 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.54 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.53 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.52 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.51 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.5 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.5 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.5 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.49 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.47 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.47 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.45 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.44 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.44 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.42 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.41 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.41 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.4 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.4 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.39 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.39 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.38 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.38 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.37 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.37 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.36 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.36 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.35 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.35 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.34 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.34 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.33 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.33 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.33 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.33 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.32 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.31 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.31 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.31 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.31 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.31 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.31 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.3 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.3 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.3 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.3 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.3 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.3 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.29 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.29 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.29 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.29 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.28 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.28 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.28 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.27 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.27 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.26 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.26 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.25 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.25 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.25 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.24 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.24 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.24 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.24 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.23 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.23 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.23 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.23 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.23 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.22 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.2 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.2 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.16 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.16 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.15 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.15 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.14 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.13 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.13 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.12 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.12 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.12 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.11 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.11 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.1 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.1 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.1 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.1 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.1 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.1 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.1 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.09 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.09 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.09 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.09 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.09 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.08 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.08 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.07 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.07 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.07 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.07 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.06 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.05 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.05 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.05 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.04 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 99.03 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.03 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 99.02 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.02 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.01 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 99.01 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.01 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.01 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.0 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.99 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.99 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.99 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.99 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.98 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.98 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.98 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.97 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.97 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.97 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 98.96 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.96 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.95 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.95 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 98.95 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.94 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.94 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 98.93 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.93 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.92 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.92 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.91 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.9 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.88 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.88 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.87 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.86 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.85 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.84 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.84 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.83 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.83 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.81 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.8 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.75 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.74 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.7 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.68 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.67 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.66 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.66 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.64 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.64 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.6 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.58 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.58 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.55 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.52 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.5 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.48 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.46 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.45 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.43 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.41 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.4 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.38 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.32 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.32 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.27 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.26 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.24 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.24 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.21 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.2 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 98.1 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.08 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.08 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 98.05 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.05 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.94 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.93 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.93 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.9 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.87 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.81 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.72 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.69 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.68 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.66 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.65 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.64 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.58 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.55 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.5 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.47 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.46 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.44 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.42 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 97.38 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.37 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.37 |
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-59 Score=443.72 Aligned_cols=256 Identities=19% Similarity=0.224 Sum_probs=206.8
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+++..+.++||+|+||+||+|++.+ .||||+++..... ..+.|.+|+.+|++++|||||++++++. .+.++||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEE
Confidence 4566788999999999999998643 4999999754422 2457999999999999999999999875 467899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
||+||+|.++|.. ....+++.++..|+.||+.||.|||+++ ||||||||+|||+++++++||+|||+|+.....
T Consensus 112 y~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 112 WCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred cCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999964 3457999999999999999999999999 999999999999999999999999999865431
Q ss_pred --CccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 207 --KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
....||+.|||||++.+ ++++.++|||||||+||||+||+.||...............-.........+..++++
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 269 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKA 269 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHH
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHH
Confidence 24579999999999964 4689999999999999999999999865322111111111111111112345567889
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+|+.+||+.||++|||+.+|+++|+.++..
T Consensus 270 l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 270 MKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999988764
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-59 Score=447.97 Aligned_cols=251 Identities=20% Similarity=0.264 Sum_probs=211.7
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
+..+++++||+|+||+||+|.+. +++.||||+++.... ...+.|.+|+.+|++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34567889999999999999862 467899999976543 23568999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNP 192 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~ 192 (488)
||||||++|+|.++|.... ...++|.+++.|+.||+.||.|||+++ ||||||||+|||+++++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCE
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCE
Confidence 9999999999999996421 246999999999999999999999999 9999999999999999999
Q ss_pred eeccCCCcccCCC------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccc
Q 011349 193 RLSCFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLML 265 (488)
Q Consensus 193 kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 265 (488)
||+|||+++.... .....||+.|||||++.++.++.++|||||||++|||+| |..||.+.....+ ...
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~-----~~~ 259 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV-----VEM 259 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHH-----HHH
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHH-----HHH
Confidence 9999999986532 234578999999999999999999999999999999999 7888765432221 112
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+......+.|..+++++.+|+.+||+.||++|||+.+|+++|+.+
T Consensus 260 i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 222233445667889999999999999999999999999999865
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-59 Score=448.74 Aligned_cols=253 Identities=23% Similarity=0.294 Sum_probs=213.1
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.++||+|+||+||+|.+. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..+||
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 3456788999999999999853 4778999999876544567899999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 129 AEFMPNETLSKHLFHW-----------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
||||+||+|.++|... ....++|.+++.|+.||+.||.|||+++ ||||||||+|||+++++++||+||
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCc
Confidence 9999999999999642 2357999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccccccc
Q 011349 198 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 198 gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
|+++..... ....||+.|||||++.++.++.++|||||||++|||+| |+.||........ ...+....
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~-----~~~i~~~~ 247 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-----IECITQGR 247 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-----HHHHHHTC
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHcCC
Confidence 999865432 23468999999999999999999999999999999999 8888866432221 11111222
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
....|..+++++.+|+.+||+.||++|||+.+|+..|+.+.+.
T Consensus 248 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 248 VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 3345667789999999999999999999999999999988764
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-59 Score=451.63 Aligned_cols=252 Identities=23% Similarity=0.306 Sum_probs=209.2
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..+.++||+|+||+||+|.+. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|||
T Consensus 43 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~ 122 (329)
T 4aoj_A 43 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVF 122 (329)
T ss_dssp EEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred eEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 456678999999999999864 47889999998765445678999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeecc
Q 011349 130 EFMPNETLSKHLFHWE-------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSC 196 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~D 196 (488)
|||+||+|.+++.... ..+++|.+++.|+.||+.||.|||+++ ||||||||+|||+++++++||+|
T Consensus 123 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp ECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECC
T ss_pred EcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEcc
Confidence 9999999999986431 246999999999999999999999999 99999999999999999999999
Q ss_pred CCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccc
Q 011349 197 FGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSC 269 (488)
Q Consensus 197 fgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 269 (488)
||+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||........ ...+...
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~-----~~~i~~g 276 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-----IDCITQG 276 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH-----HHHHHHT
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHcC
Confidence 9999865432 23568999999999999999999999999999999999 8888865432211 1111122
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+...|..+++++.+|+.+||+.||++|||+.+|+++|+.+...
T Consensus 277 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 277 RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 23445667789999999999999999999999999999998764
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-59 Score=449.02 Aligned_cols=247 Identities=16% Similarity=0.189 Sum_probs=207.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+.|.++++||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+.+|++++|||||++++++.+++.+|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4689999999999999999994 579999999997654332 4579999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
||+||+|.++|.......+++.+++.|+.||+.||.|||+++ ||||||||+||||+.+|++||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 182 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence 999999999997656667899999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+||+.|||||++.+..|+.++|||||||++|||+||+.||.+.......... .... ....+..+++++.+||
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i----~~~~-~~~~~~~~s~~~~~li 257 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI----ISGS-FPPVSLHYSYDLRSLV 257 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH----HHTC-CCCCCTTSCHHHHHHH
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH----HcCC-CCCCCccCCHHHHHHH
Confidence 2457999999999999999999999999999999999999999765332221111 1111 1233455678999999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||+.||++|||+.++++|
T Consensus 258 ~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHHTCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999986
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-58 Score=446.34 Aligned_cols=245 Identities=20% Similarity=0.250 Sum_probs=210.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.++++||+|+||+||+|.. .+|+.||||+++.......+.+.+|+.+|++++|||||+++++|.+++.+|||||||+
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 154 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 478899999999999999995 5799999999987665667789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
||+|.+++.+ ..+++.++..|+.||+.||.|||+++ ||||||||+||||+.+|++||+|||+|+..... .+.
T Consensus 155 gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 230 (346)
T 4fih_A 155 GGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 230 (346)
T ss_dssp TEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred CCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccccc
Confidence 9999999963 46999999999999999999999999 999999999999999999999999999876432 356
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+||+.|||||++.+..|+.++|||||||++|||+||++||.+......... +..... ........+++++.+||.+|
T Consensus 231 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~-i~~~~~--~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-IRDNLP--PRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSSC--CCCSCGGGSCHHHHHHHHHH
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HHcCCC--CCCCccccCCHHHHHHHHHH
Confidence 899999999999999999999999999999999999999876432211111 111010 11122345678999999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|..||++|||+.++++|
T Consensus 308 L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 308 LVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999987
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-58 Score=487.33 Aligned_cols=411 Identities=17% Similarity=0.110 Sum_probs=279.7
Q ss_pred CcccccccCCCCCCceEEEEEeC--CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCe-----e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD--EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE-----R 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-----~ 125 (488)
+.|.+++.||+|+||.||+|.+. +|+.||||++..... .....+.+|+.++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 46788999999999999999964 589999999875432 223568899999999999999999999987655 6
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
||||||++|++|.+++. ..+++.+++.|+.||+.||.|||+++ ||||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 99999999999998774 26999999999999999999999999 9999999999999975 899999999998877
Q ss_pred CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 206 GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
.....||+.|+|||++.+.. +.++|||||||++|+|++|.+|+...... ...........++.+.+|
T Consensus 234 ~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~------------~~~~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 234 FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD------------GLPEDDPVLKTYDSYGRL 300 (681)
T ss_dssp CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS------------SCCTTCHHHHHCHHHHHH
T ss_pred CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc------------cccccccccccCHHHHHH
Confidence 77778999999999997654 88999999999999999998765432110 000111111234679999
Q ss_pred HHHhccCCCCCCCC-HHHHHHHhchhhccc-----CCCCCccCC--CCCCCCCCCccccc--------------Ccchhh
Q 011349 286 ASRCLQYEPRERPN-AKSLVASLTPLQKEA-----EVPSYTLMG--IPHGTASTKQTITL--------------TPLGEA 343 (488)
Q Consensus 286 i~~cl~~dp~~Rps-~~~il~~l~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~--------------~~~~~~ 343 (488)
+.+||+.||.+||+ ++++...|..+.... ..+.+.... .+............ ....+.
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANEI 380 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHHHHHHHHHHHSCCCCCCCSSBCCCSSCCSSSHHHHGGGHHHHCCCCCCCCCHHHH
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHHHHHhhccccCCCCCcccccCCcccccccchhhhhhcccccccccccccCCHHHH
Confidence 99999999999985 566666665543211 111111000 00000000000000 000000
Q ss_pred hh---------------------chhhhHHHHHHHhhc-----------ccCchhh--hhhhhhh---------hhh---
Q 011349 344 CS---------------------RLDLTAIHEILEKVG-----------YKDDEGI--ANELSFQ---------MWT--- 377 (488)
Q Consensus 344 ~~---------------------~~~~~~i~~~l~~~~-----------~~~~~~~--~~~~~~~---------~~~--- 377 (488)
.. ..+..+....+.+.- ....+.. .....+. .+.
T Consensus 381 ~~~L~~p~~~p~~~~a~~~~a~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al 460 (681)
T 2pzi_A 381 VTALSVPLVDPTDVAASVLQATVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLA 460 (681)
T ss_dssp HHHSCCBCCCTTSTTHHHHHHTTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HhhCCCccCCCCCcchHHhhcccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 00 000011111111110 0000000 0000000 000
Q ss_pred -hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 378 -DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 378 -~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
...+++.+|+.+|.+++..|+|++|+..|++|++++|+ ++.+|+++|.+|.++|++++ +++|++|++++|+++.+|+
T Consensus 461 ~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~ 538 (681)
T 2pzi_A 461 ERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAF 538 (681)
T ss_dssp HHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHH
T ss_pred ccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHH
Confidence 01134567777777777777777777777777777777 77777777777777777777 7777777777777777888
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++|.++..+|++++|+++|++|++++|+.
T Consensus 539 ~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 567 (681)
T 2pzi_A 539 GLARARSAEGDRVGAVRTLDEVPPTSRHF 567 (681)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSCTTSTTH
T ss_pred HHHHHHHHcCCHHHHHHHHHhhcccCccc
Confidence 88888888888888888888888887764
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-58 Score=440.74 Aligned_cols=250 Identities=17% Similarity=0.122 Sum_probs=210.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...+.+.++||+|+||.||+|++ .+|+.||||+++.... ..+|+.+|+.++|||||++++++.+++.+||||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 44567888999999999999995 5699999999976542 24799999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~---- 206 (488)
|+||+|.++|.. .+.+++.++..|+.||+.||.|||+++ ||||||||+||||+.+| ++||+|||+|+.....
T Consensus 132 ~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 132 LEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999999973 457999999999999999999999999 99999999999999887 6999999999865432
Q ss_pred -----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc-ccCCCCChhhHH
Q 011349 207 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS-CLEGHFSNDDGT 280 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 280 (488)
...+||+.|||||++.+..++.++|||||||++|||+||++||........ ...+... ......+..+++
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~s~ 284 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL----CLKIASEPPPIREIPPSCAP 284 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC----HHHHHHSCCGGGGSCTTSCH
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHHcCCCCchhcCccCCH
Confidence 235799999999999999999999999999999999999999865422111 1111111 111234556788
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.+.++|.+||+.||.+|||+.|++++|.......
T Consensus 285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999998776554
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-57 Score=447.58 Aligned_cols=245 Identities=20% Similarity=0.247 Sum_probs=211.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.++++||+|+||.||+|.. .+|+.||||++........+.+.+|+.+|+.++|||||+++++|.+++.+|||||||+
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~ 231 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 231 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCC
Confidence 478899999999999999995 5699999999987766667789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
||+|.+++. ...+++.++..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... .+.
T Consensus 232 gG~L~~~i~---~~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 307 (423)
T 4fie_A 232 GGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 307 (423)
T ss_dssp TEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCC
T ss_pred CCcHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccc
Confidence 999999995 346999999999999999999999999 999999999999999999999999999876432 356
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+||+.|||||++.+..|+.++|||||||++|||++|+.||.+......... +...... .......+++++.+||.+|
T Consensus 308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~-i~~~~~~--~~~~~~~~s~~~~dli~~~ 384 (423)
T 4fie_A 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-IRDNLPP--RLKNLHKVSPSLKGFLDRL 384 (423)
T ss_dssp EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSCCC--CCSCTTSSCHHHHHHHHHH
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HHcCCCC--CCcccccCCHHHHHHHHHH
Confidence 899999999999999999999999999999999999999876432221111 1111111 1122335678899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|..||++|||+.++++|
T Consensus 385 L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 385 LVRDPAQRATAAELLKH 401 (423)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999987
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-58 Score=434.92 Aligned_cols=244 Identities=18% Similarity=0.174 Sum_probs=209.3
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+|.+++.||+|+||+||+|+ ..+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+++.+||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 357899999999999999999 4579999999997432 234567999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
|||+||+|.++|. ..+.+++.++..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+|+.....
T Consensus 112 Ey~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999999999997 3467999999999999999999999999 999999999999999999999999999875422
Q ss_pred ---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.+.+||+.|||||++.+..++.++|||||||++|||+||+.||.+......... +... ...++...++++.
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~ 262 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAK----IIKL--EYDFPEKFFPKAR 262 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHT--CCCCCTTCCHHHH
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHcC--CCCCCcccCHHHH
Confidence 356899999999999999999999999999999999999999976533222111 1111 1234556678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+||.+||..||++|||+++++.+
T Consensus 263 dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 263 DLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp HHHHHHSCSSGGGSTTSGGGTCH
T ss_pred HHHHHHccCCHhHCcChHHHcCC
Confidence 99999999999999999987543
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-57 Score=422.48 Aligned_cols=244 Identities=19% Similarity=0.252 Sum_probs=196.0
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.|.+++.||+|+||+||+|. ..+|+.||||+++.... .....+.+|+.+|++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 3567899999999999999999 45799999999976532 2345799999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+ +|+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHH--HSCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 9999 689999987 3567999999999999999999999999 999999999999999999999999999876543
Q ss_pred -CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
.+..||+.|||||++.+..+ +.++|||||||++|||+||+.||........... +... ...++...++++.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~ 241 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN----ISNG--VYTLPKFLSPGAAG 241 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHT--CCCCCTTSCHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHHH
Confidence 35689999999999998776 5799999999999999999999876533222111 1111 12344556788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
|+.+||+.||++|||++++++|
T Consensus 242 li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHC
T ss_pred HHHHHccCChhHCcCHHHHHcC
Confidence 9999999999999999999987
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-57 Score=427.43 Aligned_cols=244 Identities=19% Similarity=0.231 Sum_probs=198.6
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec----CCeeeEEE
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLLVA 129 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 129 (488)
.+.++||+|+||+||+|.+ .++..||||++...... ..+.|.+|+.+|++++|||||+++++|.+ +..+||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4556799999999999995 56889999999754322 24579999999999999999999999865 34689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeec-CCCCCeeccCCCcccCCCC-
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~- 206 (488)
|||+||+|.+++. ....+++..+..|+.||+.||.|||+++ +||||||||+|||++ .++.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~ 186 (290)
T 3fpq_A 109 ELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp ECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred eCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence 9999999999997 3467999999999999999999999986 499999999999997 4799999999999865443
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
.+.+||+.|||||++.+ .++.++|||||||++|||+||+.||.......... ..+........++...++++.+|
T Consensus 187 ~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~l 262 (290)
T 3fpq_A 187 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY---RRVTSGVKPASFDKVAIPEVKEI 262 (290)
T ss_dssp BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH---HHHTTTCCCGGGGGCCCHHHHHH
T ss_pred cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHH---HHHHcCCCCCCCCccCCHHHHHH
Confidence 35679999999999875 69999999999999999999999986532111100 01111111112233445789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||++|||+.++++|
T Consensus 263 i~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 263 IEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999987
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-56 Score=436.02 Aligned_cols=257 Identities=21% Similarity=0.272 Sum_probs=213.7
Q ss_pred CCCcccccccCCCCCCceEEEEEeCC------CcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCC-CCCcccccceecC-
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDE------DRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRS-ERLVNLIGCCCEG- 122 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h-~niv~~~~~~~~~- 122 (488)
..+.+.++++||+|+||+||+|.+.. ++.||||+++...... .+.|.+|+.+|.+++| ||||+++|+|.+.
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 34567889999999999999998432 3579999998655332 4579999999999965 8999999998764
Q ss_pred CeeeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 123 EERLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
+.++||||||++|+|.++|+... ...+++.+++.|+.||+.||.|||+++ ||||||||+|||+++
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSE 220 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECG
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCC
Confidence 56899999999999999996421 345899999999999999999999999 999999999999999
Q ss_pred CCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccc
Q 011349 189 DGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKN 261 (488)
Q Consensus 189 ~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~ 261 (488)
++++||+|||+|+...... ...||+.|||||++.+..++.++|||||||++|||+| |+.||++.... ..
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~----~~ 296 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EE 296 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----HH
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH----HH
Confidence 9999999999998764432 3467899999999999999999999999999999998 88888654211 11
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 262 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+...+....+...|..+++++.+++.+||+.||++|||+.+|+++|+.+.+.
T Consensus 297 ~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 297 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 1222223334456667788999999999999999999999999999987654
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-57 Score=429.69 Aligned_cols=244 Identities=19% Similarity=0.213 Sum_probs=201.4
Q ss_pred CcccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
++|++++.||+|+||+||+|+. .+++.||||+++.... .....+.+|+++|++++|||||++++++.+++.+||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4578999999999999999984 2478899999975432 223468899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
|||||+||+|.+++. ..+.+++.++..++.||+.||.|||+++ ||||||||+|||++.+|++||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 999999999999997 3467999999999999999999999999 99999999999999999999999999986532
Q ss_pred --CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
..+.+||+.|||||++.+..++.++|||||||++|||+||+.||.+......... +... ...++..+++++.
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~ 254 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM----ILKA--KLGMPQFLSPEAQ 254 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHH
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH----HHcC--CCCCCCcCCHHHH
Confidence 2356899999999999999999999999999999999999999876533222111 1111 1234556778999
Q ss_pred HHHHHhccCCCCCCCC-----HHHHHHH
Q 011349 284 RLASRCLQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps-----~~~il~~ 306 (488)
+|+.+||+.||++||| ++++++|
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 9999999999999998 4688876
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-55 Score=422.53 Aligned_cols=251 Identities=17% Similarity=0.228 Sum_probs=196.4
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHH--HHHHHHHhhcCCCCCcccccceecCC----eeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQF--LEEARAVGLLRSERLVNLIGCCCEGE----ERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 129 (488)
+.+.++||+|+||+||+|++ +|+.||||+++... .+.+ ..|+..+.+++|||||+++++|.+++ .++|||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 45667899999999999998 68899999996543 3333 45666667889999999999998653 579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK--------GRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
|||+||+|.+++. ..++++..+.+++.|++.||.|||++ + ||||||||+|||++.++++||+|||+++
T Consensus 81 Ey~~~gsL~~~l~---~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 81 DYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp ECCTTCBHHHHHH---HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCCCcHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 9999999999996 35699999999999999999999986 6 9999999999999999999999999998
Q ss_pred cCCCC--------CccccccCCCCccccccC------CcccCCceEeehHHHHHHhhCCCCCCcchhhhhh------c--
Q 011349 202 NSRDG--------KSYSTNLAFTPPEYLRTG------RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR------G-- 259 (488)
Q Consensus 202 ~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~------~-- 259 (488)
..... ....||+.|||||++.+. .++.++|||||||++|||+||.+|+......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 65432 134689999999999764 4778999999999999999998765322110000 0
Q ss_pred --cc-cccccccccCCCCCh-----hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 260 --KN-FLMLMDSCLEGHFSN-----DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 260 --~~-~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.. .........++..+. ..+..+.+|+.+||+.||++|||+.+|++.|+.+..+.
T Consensus 237 ~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 00 001112222333332 35678999999999999999999999999999987653
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-54 Score=413.09 Aligned_cols=241 Identities=17% Similarity=0.238 Sum_probs=188.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCC---------
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGE--------- 123 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------- 123 (488)
+|.+++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+.+|++++|||||+++++|.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 367889999999999999994 56999999999765432 2457899999999999999999999987544
Q ss_pred ---eeeEEEecCCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 124 ---ERLLVAEFMPNETLSKHLFHWEN-QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 124 ---~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
.+|+|||||+||+|.+++..... ...++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCcc
Confidence 37999999999999999974221 23566778999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC----------------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc
Q 011349 200 MKNSRDG----------------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL 263 (488)
Q Consensus 200 a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 263 (488)
|+..... .+.+||+.|||||++.+..++.++|||||||++|||++ ||......... +.
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~---~~ 238 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRT---LT 238 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH---HH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHH---HH
Confidence 9865432 13469999999999999999999999999999999996 55433211100 00
Q ss_pred cccccccCCCCCh---hhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 MLMDSCLEGHFSN---DDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
......+++ ..++.+.+|+.+||+.||.+|||+.++++|
T Consensus 239 ----~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 239 ----DVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp ----HHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----HHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111112222 334567899999999999999999999986
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-52 Score=411.35 Aligned_cols=248 Identities=15% Similarity=0.212 Sum_probs=200.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec------CCee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE------GEER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~ 125 (488)
.|.+++.||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|+++|+.++|||||++++++.. .+.+
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 589999999999999999994 57999999999755422 23568899999999999999999998753 3578
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
|||||||+ |+|.+++. ..+.+++.++..|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++....
T Consensus 135 ~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp EEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred EEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 99999996 78999997 4578999999999999999999999999 99999999999999999999999999986532
Q ss_pred --------CCccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-------cc-----
Q 011349 206 --------GKSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------LM----- 264 (488)
Q Consensus 206 --------~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-------~~----- 264 (488)
..+.+||+.|||||++.+. .++.++||||+||++|||+||++||++........... ..
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~ 290 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC--
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhh
Confidence 2356899999999998875 56899999999999999999999997653211100000 00
Q ss_pred -------c---cccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 -------L---MDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 -------~---~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. +....... ..+..++++.+||.+||..||.+|||+.++++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0 00000000 011345789999999999999999999999987
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-51 Score=399.21 Aligned_cols=244 Identities=19% Similarity=0.238 Sum_probs=196.1
Q ss_pred cccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.|.++++||+|+||+||+|+.+ +++.||||++.... ....+.+|+++|+.+ +|||||++++++.+.+.+|+||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 4689999999999999999842 46789999986543 456789999999999 6999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~-- 206 (488)
||++||+|.+++. .+++.++..++.||+.||.|||++| ||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 100 E~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 100 PYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp ECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred eCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 9999999999983 4999999999999999999999999 9999999999999876 79999999999754321
Q ss_pred ------------------------------CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhh
Q 011349 207 ------------------------------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALD 255 (488)
Q Consensus 207 ------------------------------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~ 255 (488)
.+.+||+.|||||++.+. .++.++||||+||++|||+||+.||.....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence 134689999999999875 4899999999999999999999988543211
Q ss_pred hhhc-------------------------------cccccccc------c------------ccCCCCChhhHHHHHHHH
Q 011349 256 LIRG-------------------------------KNFLMLMD------S------------CLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 256 ~~~~-------------------------------~~~~~~~~------~------------~~~~~~~~~~~~~l~~li 286 (488)
.... ........ . ..........++++.+|+
T Consensus 254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl 333 (361)
T 4f9c_A 254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL 333 (361)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence 0000 00000000 0 000011123467889999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||..||++|||++|+++|
T Consensus 334 ~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 334 DKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHTCSCTTTSCCHHHHHTS
T ss_pred HHHCcCChhHCcCHHHHhcC
Confidence 99999999999999999987
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-51 Score=418.87 Aligned_cols=249 Identities=19% Similarity=0.169 Sum_probs=204.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHH---HHHHhhcCCCCCcccccceecCCee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEE---ARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
.++|.+++.||+|+||.||+|+. .+|+.||||+++... ......+.+| +.+++.++|||||+++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 35789999999999999999994 569999999996432 1222334444 6667778999999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
|||||||+||+|.++|. ..+.+++..+..++.||+.||.|||++| ||||||||+||||+.+|++||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 99999999999999997 3467999999999999999999999999 99999999999999999999999999987654
Q ss_pred C--CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 206 G--KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 206 ~--~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
. .+.+||+.|||||++.+ ..|+.++|||||||++|||+||.+||.+....... ........ ....++...++++
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-~i~~~i~~--~~~~~p~~~S~~a 421 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLT--MAVELPDSFSPEL 421 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-HHHHHHHH--CCCCCCTTSCHHH
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhhcC--CCCCCCccCCHHH
Confidence 3 46789999999999974 57999999999999999999999998754221110 00011111 1223455677899
Q ss_pred HHHHHHhccCCCCCCCC-----HHHHHHHh
Q 011349 283 VRLASRCLQYEPRERPN-----AKSLVASL 307 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps-----~~~il~~l 307 (488)
.+||.+||..||.+|++ +++|++|-
T Consensus 422 ~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp HHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred HHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence 99999999999999998 78998873
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=421.17 Aligned_cols=249 Identities=20% Similarity=0.152 Sum_probs=210.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.|.+++.||+|+||.||+|.. .+|+.||||++......+.+.+.+|+.+|+.++|||||+++++|.+.+.+|||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 3578899999999999999994 579999999998765455667999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC--CCCeeccCCCcccCCCCC---
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD--GNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~--~~~kl~Dfgla~~~~~~~--- 207 (488)
+||+|.++|.. ....+++.++..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999999864 3457999999999999999999999999 9999999999999854 899999999999876543
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+||+.|||||++.+..++.++|||||||++|||++|.+||.+............. ............++++.+||.
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~dli~ 392 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC--DWNMDDSAFSGISEDGKDFIR 392 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT--CCCCCSGGGTTSCHHHHHHHH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhC--CCCCCcccccCCCHHHHHHHH
Confidence 457999999999999999999999999999999999999998765332221111000 000111122345678999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..||.+|||+.++++|
T Consensus 393 ~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 393 KLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TTSCSSGGGSCCHHHHHHS
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999987
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-49 Score=382.50 Aligned_cols=270 Identities=24% Similarity=0.421 Sum_probs=226.3
Q ss_pred ccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccce
Q 011349 40 EFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC 119 (488)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 119 (488)
.+++.++..++++| .+.+.||+|+||.||+|.+.+++.||||++........+.+.+|+.+++.++||||+++++++
T Consensus 28 ~~~~~~~~~~~~~y---~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 104 (321)
T 2qkw_B 28 RVPLVDLEEATNNF---DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104 (321)
T ss_dssp --CCSCCCCCCCCC---SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred eecHHHHHHHHhcc---CccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 34445555566666 677788999999999999888999999999877656677899999999999999999999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
...+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCC
T ss_pred cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeec
Confidence 99999999999999999999996432 235999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh-----------hhhcc
Q 011349 198 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD-----------LIRGK 260 (488)
Q Consensus 198 gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~-----------~~~~~ 260 (488)
|+++..... ....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .....
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 999764321 2345799999999999889999999999999999999999987643211 11122
Q ss_pred ccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 261 NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+...+++......+...+..+.+++.+||+.||++|||+.+++++|+.+.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 23344444455566778889999999999999999999999999999988764
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-48 Score=377.55 Aligned_cols=273 Identities=28% Similarity=0.466 Sum_probs=227.7
Q ss_pred CCCCccccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCC
Q 011349 34 ALPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERL 112 (488)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~ni 112 (488)
.....+.|++.++...+++| .+.+.||+|+||.||+|...+|+.||||++...... ....+.+|+.+++.++||||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~y---~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i 89 (326)
T 3uim_A 13 HLGQLKRFSLRELQVASDNF---SNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 89 (326)
T ss_dssp --CCCEECCTHHHHTTTTSS---CSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTB
T ss_pred ccCccceecHHHHHHHhhcc---ccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCc
Confidence 34456789999999888877 566777999999999999878999999999865422 23479999999999999999
Q ss_pred cccccceecCCeeeEEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccCCceeec
Q 011349 113 VNLIGCCCEGEERLLVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSK---GRALYHDLNTYRILFD 187 (488)
Q Consensus 113 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~---~~iiH~Dlkp~Nill~ 187 (488)
+++++++...+..++||||+++|+|.+++... ....+++..+..++.||+.||.|||+. + |+||||||+|||++
T Consensus 90 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLD 168 (326)
T ss_dssp CCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEEC
T ss_pred cceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEEC
Confidence 99999999999999999999999999999753 234599999999999999999999999 8 99999999999999
Q ss_pred CCCCCeeccCCCcccCCCC-----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh-------
Q 011349 188 QDGNPRLSCFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD------- 255 (488)
Q Consensus 188 ~~~~~kl~Dfgla~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~------- 255 (488)
.++.+||+|||+++..... ....||+.|+|||.+.+..++.++|||||||++|+|+||+.||......
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 248 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBH
T ss_pred CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhH
Confidence 9999999999999865432 2345899999999998888999999999999999999999988532111
Q ss_pred ------hhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 256 ------LIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 256 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
...........+.......+...+..+.+++.+||+.||.+|||+.+++++|+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 1122233344444455566778889999999999999999999999999999864
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-48 Score=374.32 Aligned_cols=256 Identities=20% Similarity=0.271 Sum_probs=214.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+.+.+.+.||+|+||.||+|.. .+++.||+|++........+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 3567888999999999999995 468999999987655445678999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
+|++|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 90 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 90 KGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp TTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred CCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 99999999975 3567999999999999999999999999 9999999999999999999999999997654321
Q ss_pred -------------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC
Q 011349 208 -------------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 208 -------------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (488)
...||+.|+|||++.+..++.++|||||||++|||++|..|+......... .............
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~ 244 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---FGLNVRGFLDRYC 244 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---SSBCHHHHHHHTC
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---HhhhhhccccccC
Confidence 346899999999999999999999999999999999999877643211111 1111111111223
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+..+++.+.+++.+||+.||++|||+.++++.|+.++...
T Consensus 245 ~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 245 PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 4455678999999999999999999999999999998764
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-48 Score=385.05 Aligned_cols=306 Identities=21% Similarity=0.264 Sum_probs=203.2
Q ss_pred cccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+.+.+.||+|+||.||+|... ++..||||+++..... ..+.|.+|+.++++++||||+++++++...+..++||
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 4677888999999999999854 5778999999765322 2457999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||+++|+|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 126 e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 126 EYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp ECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred eCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 99999999999964 3456999999999999999999999999 9999999999999999999999999998664322
Q ss_pred -----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...+++.|+|||++.+..++.++|||||||++|||++ |+.|+........ ...+........+..++..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~ 278 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEGYRLPPPMDCPAA 278 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH-----HHHHHTTEECCCCTTCBHH
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCccccHH
Confidence 1234678999999999999999999999999999998 8888765432211 1111122223344566788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCCCCccCCC--CCC---CCCCCcccccCcchhhhhchhhhHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGI--PHG---TASTKQTITLTPLGEACSRLDLTAIHEIL 356 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 356 (488)
+.+++.+||+.||.+||++.++++.|+.+.............. +.. ...........+...|...+.+....+.|
T Consensus 279 l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 358 (373)
T 2qol_A 279 LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDWLNGVWTAHCKEIF 358 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGGGGGSBCCC----CCCEEC----------------------------
T ss_pred HHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCccccccccCCCCCCcccccCCCCccccCCCCHHHHHHhccchHHHHHH
Confidence 9999999999999999999999999999876532211111100 100 01111122233455677777777788888
Q ss_pred HhhcccCchhh
Q 011349 357 EKVGYKDDEGI 367 (488)
Q Consensus 357 ~~~~~~~~~~~ 367 (488)
...|+.+.+.+
T Consensus 359 ~~~~~~~~~~~ 369 (373)
T 2qol_A 359 TGVEYSSCDTI 369 (373)
T ss_dssp -----------
T ss_pred HhcCCCcHHHH
Confidence 87777766543
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-48 Score=371.14 Aligned_cols=262 Identities=21% Similarity=0.303 Sum_probs=207.8
Q ss_pred cCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
-.+..+.+++.||+|+||.||+|.. +|+.||||++....... .+.+.+|+.++++++||||+++++++...+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3455778899999999999999987 68889999997655332 34789999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 129 AEFMPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
|||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 99999999999996321 123999999999999999999999986 4999999999999999999999999999754432
Q ss_pred ----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 ----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... ...........+...++++
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l 268 (309)
T 3p86_A 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA----AVGFKCKRLEIPRNLNPQV 268 (309)
T ss_dssp ---------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH----HHHHSCCCCCCCTTSCHHH
T ss_pred ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHHhcCCCCCCCccCCHHH
Confidence 34578999999999999999999999999999999999999886543221111 1111112234455677889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
.+|+.+||+.||.+|||+.++++.|+.+.+...++
T Consensus 269 ~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999998765433
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-48 Score=371.66 Aligned_cols=247 Identities=18% Similarity=0.242 Sum_probs=209.9
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...|.+++.||+|+||.||+|. ..+++.||||++........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 3467889999999999999999 467999999999876656677899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
++||+|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp CTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 999999999963 46999999999999999999999999 999999999999999999999999998765433 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||+||..||............. .........+...+..+.+++.
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~ 251 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDFLN 251 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHCSCCCSCGGGSCHHHHHHHH
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCCCCCCCCccccCHHHHHHHH
Confidence 4578999999999999999999999999999999999999886542211110000 0011112234456788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||+.||++|||+.++++|
T Consensus 252 ~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHSCSSTTTSCCHHHHTTC
T ss_pred HHccCChhHCcCHHHHhhC
Confidence 9999999999999999987
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-47 Score=367.82 Aligned_cols=263 Identities=19% Similarity=0.217 Sum_probs=218.5
Q ss_pred cccCHHHHHHHhcCCCc-------ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCC
Q 011349 39 REFNLDQLRAATSGFCA-------DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSE 110 (488)
Q Consensus 39 ~~~~~~~~~~~~~~~~~-------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 110 (488)
..|+++++..+++.... +...+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 56899999999876432 345567899999999999965 7999999999877666677899999999999999
Q ss_pred CCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC
Q 011349 111 RLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG 190 (488)
Q Consensus 111 niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~ 190 (488)
||+++++++...+..++||||++|++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCC
Confidence 99999999999999999999999999999984 456999999999999999999999999 99999999999999999
Q ss_pred CCeeccCCCcccCCCC----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc
Q 011349 191 NPRLSCFGLMKNSRDG----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM 266 (488)
Q Consensus 191 ~~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 266 (488)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+....
T Consensus 179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~ 257 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-RLRDSP 257 (321)
T ss_dssp CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSS
T ss_pred cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHhcCC
Confidence 9999999998765432 34578999999999999899999999999999999999999886542221111 000000
Q ss_pred ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+ ........++.+.+++.+||+.||++|||+.+++++-.
T Consensus 258 ~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 297 (321)
T 2c30_A 258 PP--KLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297 (321)
T ss_dssp CC--CCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred CC--CcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 00 01122345678999999999999999999999998743
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-48 Score=373.80 Aligned_cols=246 Identities=19% Similarity=0.266 Sum_probs=208.9
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
..+.|.+++.||+|+||.||+|.+ .+|+.||||++...... ..+.+.+|+.+|+.++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 345678999999999999999995 67999999999754322 245688999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||++||+|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 93 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 93 MEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp ECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred EECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 999999999999963 456999999999999999999999999 999999999999999999999999999865543
Q ss_pred -CccccccCCCCccccccCCcc-cCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~-~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
....||+.|+|||.+.+..++ .++|||||||++|+|+||+.||.+........... .. ....+...++++.+
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~----~~--~~~~p~~~s~~~~~ 243 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL----RG--KYRIPFYMSTDCEN 243 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----HC--CCCCCTTSCHHHHH
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH----hC--CCCCCCCCCHHHHH
Confidence 345789999999999887765 79999999999999999999987654332221111 11 11234456788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
|+.+||..||.+|||+.++++|
T Consensus 244 li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 244 LLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHCCCChhHCcCHHHHhcC
Confidence 9999999999999999999987
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=360.29 Aligned_cols=252 Identities=22% Similarity=0.296 Sum_probs=214.1
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+.+++.||+|+||.||+|...+++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 4678889999999999999998888899999998654 345789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KS 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 208 (488)
+++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..... ..
T Consensus 89 ~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 89 HGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp TCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9999999964 3456999999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+|+.|+|||.+.+..++.++||||||+++|+|+| |..||.......... .+........+...++.+.+++.
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~ 241 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-----DISTGFRLYKPRLASTHVYQIMN 241 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HHHTTCCCCCCTTSCHHHHHHHH
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHH-----HHhcCccCCCCCcCCHHHHHHHH
Confidence 456778999999998999999999999999999999 887776543222111 11111222334445788999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+||+.||++|||+.+++++|+.+...
T Consensus 242 ~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 242 HCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHccCCcccCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999988764
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=375.62 Aligned_cols=254 Identities=20% Similarity=0.311 Sum_probs=211.5
Q ss_pred CcccccccCCCCCCceEEEEEe--------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV--------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 123 (488)
+.+.+++.||+|+||.||+|.. .++..||||+++..... ..+.+.+|+.+++++ +||||+++++++...+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 4567888999999999999984 23567999999765322 245799999999999 8999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
..++||||++||+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 239 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTT
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCC
Confidence 9999999999999999997532 235899999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 262 (488)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |..||....... .
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~-----~ 314 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-----L 314 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----H
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-----H
Confidence 99999999999865432 23345788999999999999999999999999999999 888776542221 1
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
...+........+..++.++.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 315 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 112222223345556778999999999999999999999999999988654
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-47 Score=370.31 Aligned_cols=245 Identities=18% Similarity=0.219 Sum_probs=208.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCC---CCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRS---AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+.+++.||+|+||.||+|.. .+|+.||||+++.. .......+.+|+.+|+.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 4678899999999999999995 46999999999753 2234567899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 161 (337)
T 1o6l_A 85 EYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161 (337)
T ss_dssp ECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc
Confidence 99999999999873 456999999999999999999999999 99999999999999999999999999986432
Q ss_pred CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 206 GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............ ... ...++...++++.++
T Consensus 162 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i----~~~--~~~~p~~~s~~~~~l 235 (337)
T 1o6l_A 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI----LME--EIRFPRTLSPEAKSL 235 (337)
T ss_dssp BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHC--CCCCCTTSCHHHHHH
T ss_pred ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH----HcC--CCCCCCCCCHHHHHH
Confidence 23567899999999999999999999999999999999999998754332211111 111 123445567889999
Q ss_pred HHHhccCCCCCCC-----CHHHHHHHh
Q 011349 286 ASRCLQYEPRERP-----NAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rp-----s~~~il~~l 307 (488)
+.+||+.||.+|| ++.++++|-
T Consensus 236 i~~lL~~dP~~R~g~~~~~~~ei~~h~ 262 (337)
T 1o6l_A 236 LAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp HHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred HHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence 9999999999999 899999883
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=371.33 Aligned_cols=268 Identities=21% Similarity=0.268 Sum_probs=211.1
Q ss_pred cCHHHHHHHhcCCC------cccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCC
Q 011349 41 FNLDQLRAATSGFC------ADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRS 109 (488)
Q Consensus 41 ~~~~~~~~~~~~~~------~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h 109 (488)
.++.+...++..|. .+.+++.||+|+||.||+|.+. .+..||||+++..... ..+.+.+|+.++++++|
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h 109 (325)
T 3kul_A 30 HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109 (325)
T ss_dssp -------------CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCC
T ss_pred ccccCccccchhhccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 34555555555443 5678899999999999999963 3456999999865322 24579999999999999
Q ss_pred CCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 110 ERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 110 ~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
|||+++++++.+++..++||||++|++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 110 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~ 187 (325)
T 3kul_A 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSN 187 (325)
T ss_dssp TTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTT
T ss_pred CCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCC
Confidence 9999999999999999999999999999999964 3457999999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC-------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccc
Q 011349 190 GNPRLSCFGLMKNSRDGK-------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKN 261 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~ 261 (488)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|||++ |..||.........
T Consensus 188 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~--- 264 (325)
T 3kul_A 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI--- 264 (325)
T ss_dssp CCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH---
T ss_pred CCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHH---
Confidence 999999999998764432 2234678999999998899999999999999999999 88887654322211
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 262 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..+........+..++..+.+|+.+||..||.+|||+.++++.|+.+.....
T Consensus 265 --~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 265 --SSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp --HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred --HHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 1111122333455677899999999999999999999999999999887643
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-47 Score=359.19 Aligned_cols=253 Identities=20% Similarity=0.278 Sum_probs=212.2
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
..+.+++.||+|+||.||+|...++..||||+++... ...+.+.+|+.++.+++||||+++++++......++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 3568889999999999999998888889999998655 345779999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 87 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 87 NGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp TCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred CCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9999999964 2345999999999999999999999999 9999999999999999999999999998665432 2
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+|+.|+|||.+.+..++.++||||||+++|+|+| |..||........... +........+...++.+.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~ 239 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK-----VSQGHRLYRPHLASDTIYQIMY 239 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-----HHTTCCCCCCTTSCHHHHHHHH
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH-----HHcCCCCCCCCcChHHHHHHHH
Confidence 345678999999998899999999999999999999 8887754422211111 1111122233445678999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+||+.||.+|||+.+++++|+.+..+.
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 999999999999999999999987653
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-47 Score=362.31 Aligned_cols=257 Identities=17% Similarity=0.202 Sum_probs=210.1
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 91 (294)
T 4eqm_A 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME 91 (294)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence 578899999999999999994 568999999986544333 3578999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++|++|.+++.. ..++++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 92 YIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp CCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 9999999999973 457999999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||.+.+..++.++|||||||++|+|+||+.||................... .....+...++.+.++
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l 247 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN-VTTDVRKDIPQSLSNV 247 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC-HHHHSCTTSCHHHHHH
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC-cchhcccCCCHHHHHH
Confidence 23468999999999999999999999999999999999999987653322211111111111 1112234456889999
Q ss_pred HHHhccCCCCCCC-CHHHHHHHhchhhcccC
Q 011349 286 ASRCLQYEPRERP-NAKSLVASLTPLQKEAE 315 (488)
Q Consensus 286 i~~cl~~dp~~Rp-s~~~il~~l~~~~~~~~ 315 (488)
+.+||+.||.+|| +++++.+.|..+.....
T Consensus 248 i~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 248 ILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp HHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred HHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 9999999999998 99999999988766544
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-46 Score=357.04 Aligned_cols=272 Identities=27% Similarity=0.442 Sum_probs=223.0
Q ss_pred CccccCHHHHHHHhcCCCcccc---cccCCCCCCceEEEEEeCCCcEEEEEEccCCCC----CChHHHHHHHHHHhhcCC
Q 011349 37 GFREFNLDQLRAATSGFCADNI---VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW----PDSRQFLEEARAVGLLRS 109 (488)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~---~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h 109 (488)
.+..|++.++..++++|+...+ .+.||+|+||.||+|.. +++.||||++..... ...+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 3578999999999999986633 26789999999999986 678899999875431 224579999999999999
Q ss_pred CCCcccccceecCCeeeEEEecCCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 110 ERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 110 ~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
|||+++++++.+.+..++||||+++++|.+++... ...++++..++.++.||+.||.|||+.+ ++||||||+||+++.
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDE 168 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcC
Confidence 99999999999999999999999999999998642 2456999999999999999999999999 999999999999999
Q ss_pred CCCCeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh----
Q 011349 189 DGNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR---- 258 (488)
Q Consensus 189 ~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~---- 258 (488)
++.+||+|||+++..... ....||+.|+|||.+.+ .++.++||||||+++|+|+||..|+.........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999998765432 23468999999999875 5889999999999999999999887643211100
Q ss_pred ------ccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 259 ------GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 259 ------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
...+...++... ...+...+..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 001111122211 23456678899999999999999999999999999998754
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=359.21 Aligned_cols=252 Identities=22% Similarity=0.307 Sum_probs=210.5
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
..+.+++.||+|+||.||+|.+.++..||||+++... ...+.+.+|++++.+++||||+++++++.+.+..++||||++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 4568889999999999999998888899999998654 345789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KS 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 208 (488)
+++|.+++.. ....+++.+++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 103 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 103 NGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp TCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 9999999964 2456999999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||.......... .+........+...++.+.+++.
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~ 255 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-----HIAQGLRLYRPHLASEKVYTIMY 255 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-----HHHTTCCCCCCTTCCHHHHHHHH
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH-----HHhcccCCCCCCcCCHHHHHHHH
Confidence 455788999999998899999999999999999998 888876543221111 11111222334445688999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+||+.||.+|||+.+++++|..+..+
T Consensus 256 ~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 256 SCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHccCChhHCcCHHHHHHHHHHHhhc
Confidence 99999999999999999999988754
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-47 Score=371.76 Aligned_cols=247 Identities=16% Similarity=0.148 Sum_probs=205.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.|.+++.||+|+||.||+|.. .+|+.||||+++..... ..+.+.+|+.+|++++||||+++++++.+....++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 468889999999999999995 46899999999765422 24679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC----CCeeccCCCcccC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNS 203 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 203 (488)
||||++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp EEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 999999999999996 4567999999999999999999999999 99999999999998777 7999999999876
Q ss_pred CCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 204 RDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 204 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+............... ..........+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~ 247 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY--DFDEEFFSQTSE 247 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTSCH
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--CCCchhccCCCH
Confidence 543 355789999999999988999999999999999999999999876532221111000000 000011123467
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+||.+||..||.+|||+.++++|
T Consensus 248 ~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 248 LAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 89999999999999999999999986
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=379.68 Aligned_cols=253 Identities=24% Similarity=0.346 Sum_probs=211.5
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.+.+.+.||+|+||.||+|.+. +++.||||+++..... ..+.|.+|+.+|++++||||+++++++...+..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 35567889999999999999965 7899999999754322 234688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK---- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 207 (488)
+++|+|.+++.. .+..+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 194 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 194 VQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 999999999964 3346999999999999999999999999 9999999999999999999999999998654321
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...+++.|+|||.+.++.++.++|||||||++|||+| |..|+........ ...+........+..++..+.+
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~ 346 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-----REFVEKGGRLPCPELCPDAVFR 346 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH-----HHHHHTTCCCCCCTTCCHHHHH
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHH
Confidence 2234678999999998899999999999999999998 8877765432211 1112222233445567789999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 285 LASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
|+.+||+.||++|||+.++++.|+.+.+.
T Consensus 347 li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 347 LMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999988764
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=381.59 Aligned_cols=252 Identities=22% Similarity=0.320 Sum_probs=212.6
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC-eeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE-ERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~ 131 (488)
...+.+++.||+|+||.||+|.+ .|+.||||+++... ..+.|.+|+.+|++++||||+++++++.... ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 45678889999999999999987 47789999998654 4678999999999999999999999987655 79999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Cccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 210 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 210 (488)
+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 347 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 347 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------C
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCC
Confidence 99999999998654555899999999999999999999999 999999999999999999999999999865432 2345
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+++.|+|||.+.+..++.++|||||||++|||+| |+.|+....... ....+....+...+..+++.+.+|+.+|
T Consensus 348 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-----~~~~i~~~~~~~~p~~~~~~l~~li~~c 422 (450)
T 1k9a_A 348 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----VVPRVEKGYKMDAPDGCPPAVYDVMKNC 422 (450)
T ss_dssp CCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT-----HHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred CCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCcCCHHHHHHHHHH
Confidence 6789999999999999999999999999999998 888876532211 1111222233345667789999999999
Q ss_pred ccCCCCCCCCHHHHHHHhchhhcc
Q 011349 290 LQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
|+.||.+|||+.++++.|+.+...
T Consensus 423 l~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 423 WHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cCCChhHCcCHHHHHHHHHHHHHh
Confidence 999999999999999999988764
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-47 Score=364.71 Aligned_cols=259 Identities=19% Similarity=0.301 Sum_probs=210.0
Q ss_pred CcccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC--Ceee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~ 126 (488)
..+.+++.||+|+||.||+|.+ .+++.||||++........+.+.+|+.++++++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 3568889999999999999984 35889999999866544456899999999999999999999998653 4589
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 90 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 99999999999999965 3345999999999999999999999999 999999999999999999999999999865432
Q ss_pred C-------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh---cc--------cccccccc
Q 011349 207 K-------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR---GK--------NFLMLMDS 268 (488)
Q Consensus 207 ~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~---~~--------~~~~~~~~ 268 (488)
. ...+++.|+|||.+.+..++.++|||||||++|||+||..|+......... .. .....+..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 2 234567899999999999999999999999999999999876543222110 00 11111222
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
......+..+++++.+++.+||+.||++|||+.++++.|+.+....
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 2233445667889999999999999999999999999999987653
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-47 Score=369.57 Aligned_cols=255 Identities=17% Similarity=0.239 Sum_probs=203.6
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC----eeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE----ERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 129 (488)
..+.+++.||+|+||.||+|.+. ++.||||++.... .....+.+|+.++++++||||+++++++.... ..++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 45788899999999999999874 7889999996543 22345677999999999999999999998744 469999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CCcccccccCCceeecCCCCCeeccCCC
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK----------GRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~----------~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
||+++|+|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 102 e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 102 AFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCc
Confidence 99999999999953 4599999999999999999999998 8 99999999999999999999999999
Q ss_pred cccCCCC------CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh-------h---
Q 011349 200 MKNSRDG------KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI-------R--- 258 (488)
Q Consensus 200 a~~~~~~------~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~-------~--- 258 (488)
++..... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+...... .
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9754432 23568999999999986 3567789999999999999999988764311100 0
Q ss_pred -ccccc-cccccccCCCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 259 -GKNFL-MLMDSCLEGHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 259 -~~~~~-~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..... ........+.. ....+.++.+|+.+||+.||++|||+.++++.|+.+....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 00000 00111111111 1235677999999999999999999999999999987653
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-47 Score=383.59 Aligned_cols=252 Identities=20% Similarity=0.301 Sum_probs=213.2
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.+|++++||||+++++++. .+..++||||+++
T Consensus 189 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~ 266 (454)
T 1qcf_A 189 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAK 266 (454)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTT
T ss_pred HeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCC
Confidence 457788999999999999998888899999998654 45778999999999999999999999986 6678999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Ccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KSY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~~ 209 (488)
|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 267 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 345 (454)
T 1qcf_A 267 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 345 (454)
T ss_dssp CBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSS
T ss_pred CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCC
Confidence 99999997433346899999999999999999999999 999999999999999999999999999876432 233
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.+|+.|+|||.+.+..++.++|||||||++|||+| |+.|+......... ..+....+...+..+++++.+|+.+
T Consensus 346 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~li~~ 420 (454)
T 1qcf_A 346 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-----RALERGYRMPRPENCPEELYNIMMR 420 (454)
T ss_dssp SSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred cccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 45778999999998899999999999999999999 88887654322211 1111122333455678899999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhccc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
||+.||++|||+.+|++.|+.+....
T Consensus 421 cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 421 CWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred HccCChhHCcCHHHHHHHHHHHHhcc
Confidence 99999999999999999999887643
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=370.91 Aligned_cols=253 Identities=18% Similarity=0.105 Sum_probs=198.3
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
....|.+++.||+|+||+||++... +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 4567899999999999999999954 78999999997654 334678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC--CeeccCCCcccCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--PRLSCFGLMKNSRD--- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~~~~--- 205 (488)
|++||+|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++....
T Consensus 97 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 97 YASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence 9999999999863 456999999999999999999999999 999999999999987765 99999999874332
Q ss_pred CCccccccCCCCccccccCCcccC-CceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 206 GKSYSTNLAFTPPEYLRTGRVIPE-SVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 206 ~~~~~~t~~y~aPE~~~~~~~~~~-sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||...............+.............++.+.+
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 253 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHH
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHH
Confidence 235578999999999988777655 9999999999999999998865422111111111111111111112235688999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhc
Q 011349 285 LASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
|+.+||..||.+|||+.++++|-.
T Consensus 254 li~~~L~~dP~~Rps~~ell~hp~ 277 (361)
T 3uc3_A 254 LISRIFVADPATRISIPEIKTHSW 277 (361)
T ss_dssp HHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred HHHHHccCChhHCcCHHHHHhCcc
Confidence 999999999999999999999843
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=385.73 Aligned_cols=253 Identities=21% Similarity=0.331 Sum_probs=215.6
Q ss_pred CcccccccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..+.+.+.||+|+||.||+|.+.. +..||||+++... ...+.|.+|+.+|++++||||+++++++...+..++||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 346778899999999999999654 8899999998654 35678999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 9999999997655667999999999999999999999999 9999999999999999999999999998764322
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+++.|+|||.+.+..++.++|||||||++|||+| |..|+...... .....+....+...+..++..+.+|+
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li 452 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDYRMERPEGCPEKVYELM 452 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 2345678999999998899999999999999999999 88777654222 11222223333445566788999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+||+.||.+|||+.+|++.|+.+...
T Consensus 453 ~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 453 RACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999877543
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-46 Score=359.96 Aligned_cols=246 Identities=17% Similarity=0.209 Sum_probs=198.8
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--------------------------ChHHHHHHHHHHh
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--------------------------DSRQFLEEARAVG 105 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~ 105 (488)
.+.|.+++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 45678899999999999999994 56889999999754321 1356899999999
Q ss_pred hcCCCCCcccccceec--CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCc
Q 011349 106 LLRSERLVNLIGCCCE--GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183 (488)
Q Consensus 106 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~N 183 (488)
+++||||+++++++.+ .+..++||||+++++|.+++ ....+++..+..++.||+.||.|||+.+ |+||||||+|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~N 167 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSN 167 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHH
Confidence 9999999999999976 56799999999999999876 4567999999999999999999999999 9999999999
Q ss_pred eeecCCCCCeeccCCCcccCCCC----CccccccCCCCccccccCC---cccCCceEeehHHHHHHhhCCCCCCcchhhh
Q 011349 184 ILFDQDGNPRLSCFGLMKNSRDG----KSYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDL 256 (488)
Q Consensus 184 ill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~sDv~slG~il~el~tg~~p~~~~~~~~ 256 (488)
||++.++.+||+|||+++..... ....||+.|+|||.+.+.. .+.++|||||||++|+|++|+.||.......
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 247 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence 99999999999999999866543 2457899999999998754 3778999999999999999999886543221
Q ss_pred hhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 257 IRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.... +.............++++.+++.+||+.||++|||+.++++|
T Consensus 248 ~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 248 LHSK----IKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HHHH----HHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HHHH----HhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1111 111111111223456789999999999999999999999876
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=362.77 Aligned_cols=245 Identities=18% Similarity=0.229 Sum_probs=208.9
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+++.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 34678899999999999999995 469999999997532 23456788999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-C
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-K 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 207 (488)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 999999999999973 456999999999999999999999999 999999999999999999999999999876543 3
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||++|..||.......... .+... ...++...+.++.+++.
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE----KILNA--ELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHHC--CCCCCTTSCHHHHHHHH
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH----HHHhC--CCCCCCCCCHHHHHHHH
Confidence 5678999999999999999999999999999999999999986543221111 11111 11244556788999999
Q ss_pred HhccCCCCCCC-----CHHHHHHH
Q 011349 288 RCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rp-----s~~~il~~ 306 (488)
+||..||.+|| +++++++|
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhccCHHHcCCCcCCCHHHHhcC
Confidence 99999999999 89999987
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=364.15 Aligned_cols=255 Identities=22% Similarity=0.321 Sum_probs=208.6
Q ss_pred CcccccccCCCCCCceEEEEEeC-CC-------cEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-ED-------RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
..+.+++.||+|+||.||+|... ++ ..||+|++........+.+.+|+.++++++||||+++++++.+++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 35678889999999999999843 34 46999999766555567899999999999999999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC--------CeeccC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--------PRLSCF 197 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~--------~kl~Df 197 (488)
++||||++|++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+||
T Consensus 88 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccC
Confidence 999999999999999974 3344999999999999999999999999 999999999999998887 999999
Q ss_pred CCcccCCCCCccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 198 GLMKNSRDGKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 198 gla~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
|++..........+|+.|+|||.+.+ ..++.++|||||||++|||+||..|+............. . .....+.
T Consensus 166 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~----~--~~~~~~~ 239 (289)
T 4fvq_A 166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY----E--DRHQLPA 239 (289)
T ss_dssp CSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH----H--TTCCCCC
T ss_pred cccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh----h--ccCCCCC
Confidence 99987766666678999999999987 678999999999999999999766654332111111000 0 0112233
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCC
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 316 (488)
..+.++.+++.+||+.||.+|||+.+++++|+.+......
T Consensus 240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 3456789999999999999999999999999988876543
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=372.58 Aligned_cols=250 Identities=17% Similarity=0.255 Sum_probs=205.4
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
+...+.+++.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|..++.++ +|||||++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 345678999999999999999995 4688999999975432 2234688999999988 8999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD- 205 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 205 (488)
+||||++||+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++....
T Consensus 130 lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999873 456999999999999999999999999 99999999999999999999999999986322
Q ss_pred ---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----cccccccccCCCCChh
Q 011349 206 ---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----FLMLMDSCLEGHFSND 277 (488)
Q Consensus 206 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 277 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............ ...+.. ....++..
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~ 284 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRS 284 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTT
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCc
Confidence 23567899999999999999999999999999999999999998543211110000 001111 12234556
Q ss_pred hHHHHHHHHHHhccCCCCCCCCH------HHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRERPNA------KSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~------~~il~~ 306 (488)
.+.++.+|+.+||+.||.+||++ .++++|
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 77889999999999999999985 688877
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=365.84 Aligned_cols=249 Identities=16% Similarity=0.175 Sum_probs=207.3
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+..|.+++.||+|+||.||+|.. .+++.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 35678899999999999999995 468899999997543 3455789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC--CCCCeeccCCCcccCCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ--DGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~-- 207 (488)
++||+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 999999999963 3356999999999999999999999999 999999999999987 7899999999998765543
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC--CCChhhHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGTELVR 284 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 284 (488)
...||+.|+|||++.+..++.++|||||||++|+|++|..||........... +....... ......+.++.+
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN----IMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHHTCCCCCHHHHTTSCHHHHH
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHH----HHcCCCCCChhhhccCCHHHHH
Confidence 34689999999999988899999999999999999999999876433221111 11110000 001134678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHhc
Q 011349 285 LASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
++.+||..||.+|||+.++++|-.
T Consensus 237 li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 237 FVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp HHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHcCCChhHCcCHHHHhcChh
Confidence 999999999999999999999743
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=354.28 Aligned_cols=251 Identities=21% Similarity=0.279 Sum_probs=199.7
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC----ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP----DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+++.+.+.+.||+|+||.||+|.+ .++.||||+++..... ..+.+.+|+.+++.++||||+++++++..++..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 456778899999999999999997 4888999998764322 24678999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccccccCCceeecC--------CCCCeeccC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG--RALYHDLNTYRILFDQ--------DGNPRLSCF 197 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~iiH~Dlkp~Nill~~--------~~~~kl~Df 197 (488)
||||++|++|.+++. ...+++..++.++.|++.||.|||+.+ +++||||||+||+++. ++.+||+||
T Consensus 84 v~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999984 567999999999999999999999987 3789999999999985 778999999
Q ss_pred CCcccCCCC--CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 198 GLMKNSRDG--KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 198 gla~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
|+++..... ....||+.|+|||.+.+..++.++||||||+++|+|+||+.||.......... ...........+
T Consensus 161 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~ 236 (271)
T 3dtc_A 161 GLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY----GVAMNKLALPIP 236 (271)
T ss_dssp CC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH----HHHTSCCCCCCC
T ss_pred CcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----hhhcCCCCCCCC
Confidence 999865433 24578999999999998889999999999999999999999887543222111 111112223345
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
..+++.+.+++.+||+.||.+|||+.+++++|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 56678899999999999999999999999999764
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-47 Score=371.59 Aligned_cols=245 Identities=19% Similarity=0.254 Sum_probs=204.4
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+.+++.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|..++..+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 45678999999999999999995 468999999997532 22345688999999998 69999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 9999999999999973 456999999999999999999999999 99999999999999999999999999986432
Q ss_pred --CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|..||........... +... ...++...+..+.
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~~~ 252 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA----ILND--EVVYPTWLHEDAT 252 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHH
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHH----HHcC--CCCCCCCCCHHHH
Confidence 2356789999999999988899999999999999999999999876533222111 1111 1223445678899
Q ss_pred HHHHHhccCCCCCCCCH------HHHHHH
Q 011349 284 RLASRCLQYEPRERPNA------KSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~------~~il~~ 306 (488)
+++.+||..||.+||++ .++++|
T Consensus 253 ~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 253 GILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred HHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 99999999999999998 888886
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=380.14 Aligned_cols=252 Identities=24% Similarity=0.309 Sum_probs=209.2
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.+.||+|+||.||+|.+..+..||||+++... ...+.|.+|+.+|++++||||+++++++.. +..++||||+++
T Consensus 185 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~ 262 (452)
T 1fmk_A 185 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 262 (452)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred HceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcC
Confidence 456788899999999999998888889999998654 346789999999999999999999999865 778999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----SY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 209 (488)
|+|.+++....+..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 263 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 341 (452)
T 1fmk_A 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341 (452)
T ss_dssp CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCC
Confidence 99999997534456999999999999999999999999 9999999999999999999999999998654321 23
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.+++.|+|||.+.+..++.++|||||||++|||+| |+.|+.+....... ..+....+...+..++..+.+|+.+
T Consensus 342 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~li~~ 416 (452)
T 1fmk_A 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-----DQVERGYRMPCPPECPESLHDLMCQ 416 (452)
T ss_dssp -CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCCCCCCTTSCHHHHHHHHH
T ss_pred cccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 45778999999998999999999999999999999 88887654322111 1111222334455678899999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhccc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
||+.||++|||+.++++.|+.+....
T Consensus 417 cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 417 CWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HccCChhhCcCHHHHHHHHHHHhccC
Confidence 99999999999999999999887654
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=362.45 Aligned_cols=246 Identities=16% Similarity=0.142 Sum_probs=204.6
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
|.+.+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+|++++||||+++++++.+....++|
T Consensus 13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 92 (326)
T 2y0a_A 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 57888999999999999995 46899999999765422 356799999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC----CCeeccCCCcccCC
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNSR 204 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~~ 204 (488)
|||++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++...
T Consensus 93 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 93 LELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp EECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred EEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 99999999999996 4567999999999999999999999999 99999999999998887 79999999998764
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
.. ....||+.|+|||++.+..++.++|||||||++|+|++|..||.............. .............+..
T Consensus 170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 247 (326)
T 2y0a_A 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA--VNYEFEDEYFSNTSAL 247 (326)
T ss_dssp TTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH--TCCCCCHHHHTTSCHH
T ss_pred CCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHh--cCCCcCccccccCCHH
Confidence 32 345789999999999988999999999999999999999998865432211110000 0000000111234678
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+|+.+||..||.+|||+.++++|
T Consensus 248 ~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 248 AKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCChhhCCCHHHHhcC
Confidence 9999999999999999999999987
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-46 Score=370.18 Aligned_cols=256 Identities=21% Similarity=0.294 Sum_probs=213.2
Q ss_pred CcccccccCCCCCCceEEEEEeC--------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD--------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 123 (488)
..+.+.+.||+|+||.||+|... .+..||||+++..... ....+.+|+++++++ +||||+++++++..++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 45678899999999999999842 2357999999765422 235789999999999 8999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
..++||||+++|+|.+++.... ...+++.+++.|+.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 227 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTT
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCC
Confidence 9999999999999999997532 245999999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 262 (488)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |..|+........
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~----- 302 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL----- 302 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-----
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----
Confidence 99999999999865432 23356788999999999999999999999999999999 8888765432221
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
...+........+..+++++.+|+.+||+.||++|||+.+++++|+.+.....
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 303 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp HHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 11122222333445667889999999999999999999999999999886543
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=372.31 Aligned_cols=254 Identities=21% Similarity=0.312 Sum_probs=209.6
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+++.||+|+||.||+|.+. +++.||||+++.... .....+.+|+.++++++||||+++++++......++
T Consensus 72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 151 (367)
T 3l9p_A 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 151 (367)
T ss_dssp GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEE
Confidence 4678899999999999999843 466899999975432 224478999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeeccCCC
Q 011349 128 VAEFMPNETLSKHLFHWE-----NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGL 199 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgl 199 (488)
||||++||+|.+++.... ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG~ 230 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGM 230 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCcc
Confidence 999999999999997532 245999999999999999999999999 99999999999998554 599999999
Q ss_pred cccC------CCCCccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCC
Q 011349 200 MKNS------RDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 200 a~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
++.. .......+|+.|+|||++.+..++.++|||||||++|||+| |..||......... ..+......
T Consensus 231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~-----~~i~~~~~~ 305 (367)
T 3l9p_A 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL-----EFVTSGGRM 305 (367)
T ss_dssp HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHTTCCC
T ss_pred ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCCCC
Confidence 8743 22334567899999999998999999999999999999998 88877654322211 111111222
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..+..++..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 306 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 306 DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 344556788999999999999999999999999999887754
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-46 Score=369.42 Aligned_cols=249 Identities=18% Similarity=0.219 Sum_probs=206.7
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+++.|.+++.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+|+.++|||||++++++.+.+..++
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 356778999999999999999994 468899999986432 2345678999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+.||+|.+++. ....+++..+..++.||+.||.|||+.| |+||||||+|||++.++.+||+|||+++.....
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 999999999999997 4567999999999999999999999999 999999999999999999999999999865433
Q ss_pred --CccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 207 --KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
....||+.|+|||++.+ ..++.++|||||||++|||++|..||......... .....+. .....++...+..
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--~~~~~~~-~~~~~~p~~~s~~ 246 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK--EIVHTFE-TTVVTYPSAWSQE 246 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH--HHHHHHH-HCCCCCCTTSCHH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH--HHHHHHh-hcccCCCCcCCHH
Confidence 35678999999999974 45899999999999999999999998643211100 0000000 1112345566789
Q ss_pred HHHHHHHhccCCCCCCCC-HHHHHHH
Q 011349 282 LVRLASRCLQYEPRERPN-AKSLVAS 306 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps-~~~il~~ 306 (488)
+.+|+.+||..||.+||+ +++++.|
T Consensus 247 ~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 247 MVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp HHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred HHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 999999999999999998 7777765
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-46 Score=362.53 Aligned_cols=256 Identities=15% Similarity=0.141 Sum_probs=208.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+.+++.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++++ +||||+++++++..++..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 467889999999999999994 679999999987553 235689999999999 8999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC-----CeeccCCCcccCCCC-
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-----PRLSCFGLMKNSRDG- 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfgla~~~~~~- 206 (488)
+++|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 88 -~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 88 -GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 89999999752 567999999999999999999999999 999999999999998887 999999999864322
Q ss_pred ----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc---CCC
Q 011349 207 ----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL---EGH 273 (488)
Q Consensus 207 ----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~ 273 (488)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ....+..... ...
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~-~~~~i~~~~~~~~~~~ 243 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKE-RYQKIGDTKRATPIEV 243 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHH-HHHHHHHHHHHSCHHH
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHH-HHHHHHhhhccCCHHH
Confidence 34578999999999999999999999999999999999999986532111000 0000000000 000
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
.....| ++.+++.+||+.||.+||++.+|++.|+.+.......
T Consensus 244 ~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~ 286 (330)
T 2izr_A 244 LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYM 286 (330)
T ss_dssp HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 111234 8999999999999999999999999999887765443
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=359.79 Aligned_cols=248 Identities=18% Similarity=0.230 Sum_probs=198.0
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhh--cCCCCCcccccceec----CCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGL--LRSERLVNLIGCCCE----GEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~----~~~~~lv 128 (488)
.+.+++.||+|+||.||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....++|
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp GCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 567889999999999999987 7888999998653 34567777777777 789999999998654 3468999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS--------SKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
|||+++|+|.+++. ...+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 85 ~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 85 THYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp ECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred hhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 99999999999994 457999999999999999999999 888 999999999999999999999999998
Q ss_pred ccCCCC--------CccccccCCCCccccccC------CcccCCceEeehHHHHHHhhC----------CCCCCcchhhh
Q 011349 201 KNSRDG--------KSYSTNLAFTPPEYLRTG------RVIPESVVYSFGTLLLDLLSG----------KHIPPSHALDL 256 (488)
Q Consensus 201 ~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDv~slG~il~el~tg----------~~p~~~~~~~~ 256 (488)
+..... ....||+.|+|||++.+. .++.++|||||||++|||+|| ..||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 754332 233789999999999876 566799999999999999999 66664321110
Q ss_pred hhccccccc-cccccCCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 257 IRGKNFLML-MDSCLEGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 257 ~~~~~~~~~-~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
......... ........ .+...++.+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 000000000 00011111 2234678899999999999999999999999999876
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=359.87 Aligned_cols=252 Identities=21% Similarity=0.246 Sum_probs=201.5
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
-...|.+++.||+|+||.||+|...+|+.||||++....... ...+.+|+.++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 346789999999999999999998889999999997554222 357899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||++ ++|.+.+.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 99 e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 99 EFME-KDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp ECCS-EEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred cCCC-CCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 9998 588887764 3456999999999999999999999999 999999999999999999999999999865422
Q ss_pred -CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-----------cc---------
Q 011349 207 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-----------LM--------- 264 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-----------~~--------- 264 (488)
....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||............. ..
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 255 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHS
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhh
Confidence 24467999999999876 568999999999999999999999886542211100000 00
Q ss_pred ----ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 ----LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 ----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..............++++.+|+.+||+.||.+|||+.++++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000000112345788999999999999999999999986
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=365.11 Aligned_cols=252 Identities=17% Similarity=0.268 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcE----EEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRW----IAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
+.+.+++.||+|+||.||+|.+ .+++. ||+|.+.... ......+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 4578889999999999999994 44554 8888876443 233457889999999999999999999885 567899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 92 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EEECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 9999999999999964 3457999999999999999999999999 9999999999999999999999999998764332
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...+|+.|+|||++.+..++.++|||||||++|||+| |..||....... ....+........+..++.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 244 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-----VPDLLEKGERLAQPQICTI 244 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH-----HHHHHHTTCBCCCCTTBCT
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH-----HHHHHHcCCCCCCCCcCcH
Confidence 3456789999999998999999999999999999999 998876542211 1111222222333445567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
++.+++.+||..||.+|||+.+++++|+.+...
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 789999999999999999999999999988664
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-46 Score=361.76 Aligned_cols=249 Identities=18% Similarity=0.145 Sum_probs=203.9
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+..|.+++.||+|+||.||+|... +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 456789999999999999999954 7899999999754422 24578999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 205 (488)
|++||+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999999996 4567999999999999999999999999 99999999999999999999999999975432
Q ss_pred -CCccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 -GKSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 -~~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.....||+.|+|||++.+..+ +.++|||||||++|+|+||+.||.......... ................+..+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY---SDWKEKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH---HHHHTTCTTSTTGGGSCHHHH
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH---HHHhcccccCCccccCCHHHH
Confidence 124578999999999987765 789999999999999999999986532211110 001111111111234567899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+|+.+||..||.+|||+.+++++-
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred HHHHHHccCChhhCcCHHHHhhCh
Confidence 999999999999999999999874
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=355.23 Aligned_cols=256 Identities=19% Similarity=0.268 Sum_probs=203.0
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
++..+.+.+.||+|+||.||+|.+ .++.||||++... ...+.+.+|+.++++++||||+++++++. +..++||||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred CHhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 345678889999999999999987 4788999999643 24567999999999999999999999886 348999999
Q ss_pred CCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCCcccccccCCceeecCCCC-CeeccCCCcccCCCC
Q 011349 132 MPNETLSKHLFHWEN-QPMKWAMRVRVALYLAQALDYCSS---KGRALYHDLNTYRILFDQDGN-PRLSCFGLMKNSRDG 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~---~~~iiH~Dlkp~Nill~~~~~-~kl~Dfgla~~~~~~ 206 (488)
++|++|.+++..... ..+++..++.++.||+.||.|||+ ++ |+||||||+|||++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999974322 247899999999999999999999 77 999999999999998887 799999999765432
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||.......... ............+...+..+.++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~l 236 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI---MWAVHNGTRPPLIKNLPKPIESL 236 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH---HHHHHTTCCCCCBTTCCHHHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH---HHHHhcCCCCCcccccCHHHHHH
Confidence 34568999999999999899999999999999999999999886432111100 00001111223344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhchhhcccCC
Q 011349 286 ASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 316 (488)
+.+||+.||.+|||+.++++.|+.+......
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999998876543
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-46 Score=364.92 Aligned_cols=246 Identities=19% Similarity=0.199 Sum_probs=206.8
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.++.|.+++.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++...+..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 346788999999999999999995 678999999986431 2234578999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+ +|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 87 v~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp EECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99999 6899988863 456999999999999999999999999 999999999999999999999999999866543
Q ss_pred --CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....||+.|+|||.+.+..+ ++++|||||||++|+|++|+.||......... ..+.. .....+...++.+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-----~~i~~-~~~~~p~~~s~~~~ 236 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----KKVNS-CVYVMPDFLSPGAQ 236 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-----CCCCS-SCCCCCTTSCHHHH
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-----HHHHc-CCCCCcccCCHHHH
Confidence 35578999999999988776 68999999999999999999988654222111 11111 11234455678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHh
Q 011349 284 RLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+|+.+||..||.+|||+.+++++-
T Consensus 237 ~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 237 SLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp HHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred HHHHHHcCCChhHCcCHHHHHhCh
Confidence 999999999999999999999874
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-46 Score=365.63 Aligned_cols=263 Identities=23% Similarity=0.281 Sum_probs=214.3
Q ss_pred HHHHhcCCCcccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccc
Q 011349 46 LRAATSGFCADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGC 118 (488)
Q Consensus 46 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~ 118 (488)
+....-..+.+.+++.||+|+||.||+|... +++.||||+++...... .+.+.+|+.++++++||||++++++
T Consensus 39 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 118 (343)
T 1luf_A 39 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV 118 (343)
T ss_dssp HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred cceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 3333444456788999999999999999963 35789999998654222 4579999999999999999999999
Q ss_pred eecCCeeeEEEecCCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 011349 119 CCEGEERLLVAEFMPNETLSKHLFHWE----------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALY 176 (488)
Q Consensus 119 ~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH 176 (488)
+.+++..++||||+++|+|.+++.... ...+++.+++.++.||+.||.|||+++ |+|
T Consensus 119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH 197 (343)
T 1luf_A 119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVH 197 (343)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCC
T ss_pred EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eec
Confidence 999999999999999999999997532 257999999999999999999999999 999
Q ss_pred ccccCCceeecCCCCCeeccCCCcccCCC------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCC
Q 011349 177 HDLNTYRILFDQDGNPRLSCFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIP 249 (488)
Q Consensus 177 ~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~ 249 (488)
|||||+|||++.++.+||+|||+++.... .....+|+.|+|||.+.+..++.++|||||||++|||+| |..||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999875432 224467889999999998899999999999999999999 88887
Q ss_pred CcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 250 PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.......... .+........+..++..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 278 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 278 YGMAHEEVIY-----YVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TTSCHHHHHH-----HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCCChHHHHH-----HHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 6543222111 11111112344566788999999999999999999999999999987754
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=373.21 Aligned_cols=248 Identities=18% Similarity=0.188 Sum_probs=204.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||+|.. .+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~ 91 (444)
T 3soa_A 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL 91 (444)
T ss_dssp HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEe
Confidence 468889999999999999984 57899999999765432 235689999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec---CCCCCeeccCCCcccCCCCC-
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~~- 207 (488)
++||+|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++......
T Consensus 92 ~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 92 VTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp CBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 999999999873 466999999999999999999999999 99999999999998 56789999999998765432
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...||+.|+|||++.+..++.++|||||||++|+|++|.+||.................+ .........++++.+
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~ 246 (444)
T 3soa_A 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD--FPSPEWDTVTPEAKD 246 (444)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHH
T ss_pred eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC--CCccccccCCHHHHH
Confidence 457899999999999889999999999999999999999998765332221111110000 111111245688999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
|+.+||+.||.+|||+.++++|-
T Consensus 247 li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 247 LINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp HHHHHSCSSTTTSCCHHHHHHSC
T ss_pred HHHHHcCCChhHCCCHHHHhcCc
Confidence 99999999999999999999983
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-46 Score=355.03 Aligned_cols=250 Identities=19% Similarity=0.211 Sum_probs=200.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
..|.+++.||+|+||+||+|.. .+++.||||++....... ...+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4678899999999999999995 468999999997654322 3678899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|+++ +|.+.+.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 9975 66665543 4567999999999999999999999999 999999999999999999999999999865422
Q ss_pred CccccccCCCCccccccCC-cccCCceEeehHHHHHHhhCCCCCCcchh-hhhhcc-----------cc---ccccc---
Q 011349 207 KSYSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHAL-DLIRGK-----------NF---LMLMD--- 267 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~il~el~tg~~p~~~~~~-~~~~~~-----------~~---~~~~~--- 267 (488)
....+|+.|+|||.+.+.. ++.++|||||||++|||+||..|+..... ...... .+ ....+
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence 3456799999999998765 79999999999999999999887543211 100000 00 00000
Q ss_pred ------cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 ------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 ------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...........+..+.+|+.+||+.||++|||+.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000011223456889999999999999999999999987
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=370.56 Aligned_cols=255 Identities=22% Similarity=0.285 Sum_probs=208.2
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC-e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE-E 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-~ 124 (488)
+.+.+++.||+|+||.||+|.+ .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++.+.+ .
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 101 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 101 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc
Confidence 4568889999999999999973 23578999999765422 235799999999999 7999999999988755 4
Q ss_pred eeEEEecCCCCChhhhhccCCC----------------------------------------------------------
Q 011349 125 RLLVAEFMPNETLSKHLFHWEN---------------------------------------------------------- 146 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 146 (488)
.++||||++||+|.+++.....
T Consensus 102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (359)
T 3vhe_A 102 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 181 (359)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------------
T ss_pred eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccc
Confidence 8999999999999999974321
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC------CccccccC
Q 011349 147 ------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG------KSYSTNLA 214 (488)
Q Consensus 147 ------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~~ 214 (488)
..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....+|+.
T Consensus 182 ~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~ 260 (359)
T 3vhe_A 182 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260 (359)
T ss_dssp --CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred ccchhccccCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCce
Confidence 12899999999999999999999999 999999999999999999999999999865432 23456889
Q ss_pred CCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCC
Q 011349 215 FTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293 (488)
Q Consensus 215 y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 293 (488)
|+|||++.+..++.++|||||||++|||+| |..||........ ....+........+...++++.+++.+||+.|
T Consensus 261 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 336 (359)
T 3vhe_A 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE 336 (359)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH----HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred eEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH----HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999999999999999999999999999 9888765422111 11111112223344556788999999999999
Q ss_pred CCCCCCHHHHHHHhchhhcc
Q 011349 294 PRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 294 p~~Rps~~~il~~l~~~~~~ 313 (488)
|.+|||+.+++++|+.+...
T Consensus 337 P~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 337 PSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp GGGSCCHHHHHHHHHHHHHH
T ss_pred hhhCCCHHHHHHHHHHHHHH
Confidence 99999999999999988654
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-46 Score=365.33 Aligned_cols=246 Identities=16% Similarity=0.159 Sum_probs=209.9
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+++.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 45778899999999999999995 468999999986432 23456789999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-C
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-K 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 207 (488)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 120 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 999999999999973 356999999999999999999999999 999999999999999999999999999876543 3
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||++|..||.......... .+... ...++...+.++.+++.
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~~~~~~~li~ 270 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE----KIVSG--KVRFPSHFSSDLKDLLR 270 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTCCHHHHHHHH
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHH----HHHcC--CCCCCCCCCHHHHHHHH
Confidence 5689999999999999999999999999999999999999887543222111 11111 12344556788999999
Q ss_pred HhccCCCCCCCC-----HHHHHHHh
Q 011349 288 RCLQYEPRERPN-----AKSLVASL 307 (488)
Q Consensus 288 ~cl~~dp~~Rps-----~~~il~~l 307 (488)
+||+.||.+||+ +.++++|-
T Consensus 271 ~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 271 NLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred HHhhcCHHhccCCccCCHHHHHhCc
Confidence 999999999998 89998874
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=358.85 Aligned_cols=259 Identities=14% Similarity=0.134 Sum_probs=207.8
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCC--eeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE--ERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 130 (488)
.|.+++.||+|+||.||+|... +++.||||+++... ....+.+.+|+.++++++||||+++++++.... ..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 5788899999999999999954 58999999997543 233567889999999999999999999987655 7899999
Q ss_pred cCCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee----cCCCCCeeccCCCcccCCC
Q 011349 131 FMPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~~~ 205 (488)
|+++++|.+++.... ...+++.+++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 999999999997432 234999999999999999999999999 9999999999999 7788899999999987654
Q ss_pred CC---ccccccCCCCccccc--------cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc--------
Q 011349 206 GK---SYSTNLAFTPPEYLR--------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM-------- 266 (488)
Q Consensus 206 ~~---~~~~t~~y~aPE~~~--------~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~-------- 266 (488)
.. ...||+.|+|||++. +..++.++|||||||++|||+||+.||...............++
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (319)
T 4euu_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI 248 (319)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCC
T ss_pred CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccc
Confidence 33 456899999999986 46789999999999999999999988753211100000000000
Q ss_pred ---------------ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 267 ---------------DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 267 ---------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
........+...+..+.+++.+||+.||++|||+.+++++........
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~ 311 (319)
T 4euu_A 249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRG 311 (319)
T ss_dssp EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC--
T ss_pred hhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcC
Confidence 001112345677889999999999999999999999999987655443
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-46 Score=350.34 Aligned_cols=253 Identities=22% Similarity=0.293 Sum_probs=213.6
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.+.+.+++.||+|+||.||+|...+++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 35678889999999999999998888899999998655 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----C
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----K 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~ 207 (488)
++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 86 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 86 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 99999999965 3456999999999999999999999999 999999999999999999999999999865432 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+++.|+|||.+.+..++.++||||||+++|+|++ |..|+.......... .+........+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~l~~li 238 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-----DISTGFRLYKPRLASTHVYQIM 238 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HHHTTCCCCCCTTSCHHHHHHH
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHH-----HHhcCCcCCCCccCcHHHHHHH
Confidence 3456778999999998889999999999999999999 787775542221111 1111112223445578899999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+||+.||.+|||+.+++++|+.+...
T Consensus 239 ~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 239 NHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999988764
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-46 Score=352.07 Aligned_cols=255 Identities=20% Similarity=0.287 Sum_probs=211.1
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
.++.+.+++.||+|+||.||+|.+ +++.||||+++...... .+.+.+|+.++++++||||+++++++.+. ...++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 355778899999999999999998 48889999998654322 45799999999999999999999999877 77899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ +++||||||+||+++.++.++|+|||++.... .
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-~ 165 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-S 165 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-C
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec-c
Confidence 999999999999998644456999999999999999999999974 49999999999999999999999888765433 3
Q ss_pred CccccccCCCCccccccCCccc---CCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIP---ESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~---~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....+|+.|+|||.+.+...+. ++|||||||++|||+||+.||.......... ...........+...++.+.
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 241 (271)
T 3kmu_A 166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM----KVALEGLRPTIPPGISPHVS 241 (271)
T ss_dssp TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH----HHHHSCCCCCCCTTCCHHHH
T ss_pred cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH----HHHhcCCCCCCCCCCCHHHH
Confidence 3457899999999998765544 7999999999999999999886543222111 11112223344556678999
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 284 RLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
+++.+||+.||.+|||+.++++.|+.+..
T Consensus 242 ~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 242 KLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 99999999999999999999999998764
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=365.66 Aligned_cols=246 Identities=18% Similarity=0.238 Sum_probs=206.6
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
..+.+.+++.||+|+||.||+|.. .+|+.||||+++... ....+.+..|..++..+ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 345678899999999999999995 468999999997532 23456788999999987 8999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD- 205 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 205 (488)
+||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++....
T Consensus 95 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999999973 456999999999999999999999999 99999999999999999999999999986432
Q ss_pred ---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 206 ---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 206 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|..||........... +.. ....++...++++
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~----i~~--~~~~~p~~~s~~~ 245 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS----IRM--DNPFYPRWLEKEA 245 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHH--CCCCCCTTSCHHH
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHH----HHh--CCCCCCcccCHHH
Confidence 2356789999999999999999999999999999999999999876433221111 110 1123444567889
Q ss_pred HHHHHHhccCCCCCCCCHH-HHHHH
Q 011349 283 VRLASRCLQYEPRERPNAK-SLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~-~il~~ 306 (488)
.+++.+||..||.+||++. ++++|
T Consensus 246 ~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 246 KDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHHHHhcCCHhHcCCChHHHHcC
Confidence 9999999999999999997 77665
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-46 Score=355.21 Aligned_cols=253 Identities=21% Similarity=0.326 Sum_probs=215.2
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..+.+.+.||+|+||.||+|.+. ++..||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 45678889999999999999954 48889999997654 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
+|++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 9999999998656677999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+|+.|+|||.+.+..++.++||||||+++|+|++ |..|+....... ....+........+..+++.+.+++
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li 245 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYELLEKDYRMERPEGCPEKVYELM 245 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----HHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHhccCCCCCCCCCCHHHHHHH
Confidence 2345778999999998899999999999999999999 887776532221 1122222223344556678999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+||..||.+|||+.++++.|+.+...
T Consensus 246 ~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 246 RACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999887664
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=359.49 Aligned_cols=254 Identities=20% Similarity=0.281 Sum_probs=211.1
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+.+.+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 102 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL 102 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence 3567888999999999999985 2357899999976542 22457899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCce
Q 011349 127 LVAEFMPNETLSKHLFHWEN----------------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Ni 184 (488)
+||||+++++|.+++..... ..+++.+++.++.||+.||.|||+++ |+||||||+||
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NI 181 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNI 181 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGE
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheE
Confidence 99999999999999975322 34899999999999999999999999 99999999999
Q ss_pred eecCCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhh
Q 011349 185 LFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLI 257 (488)
Q Consensus 185 ll~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~ 257 (488)
+++.++.+||+|||+++...... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..|+.......
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~- 260 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER- 260 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-
Confidence 99999999999999998654332 3345788999999998889999999999999999999 888876542221
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
....+........+...++.+.+++.+||+.||.+|||+.+++++|+.+..+
T Consensus 261 ----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 261 ----LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp ----HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ----HHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 1111222222334556678999999999999999999999999999987654
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=363.97 Aligned_cols=248 Identities=19% Similarity=0.205 Sum_probs=205.1
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~ 109 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 468889999999999999995 46899999999765432 235788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeeccCCCcccCCCCC-
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~~- 207 (488)
++||+|.+.+. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+|||++.......
T Consensus 110 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 110 VTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp CCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 99999999886 4567999999999999999999999999 9999999999999764 459999999998765432
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
...||+.|+|||++.+..++.++|||||||++|+|++|.+||.................. .........++++.+|
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~l 264 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKSL 264 (362)
T ss_dssp CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTGGGGSCHHHHHH
T ss_pred cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHHH
Confidence 457899999999999889999999999999999999999998654322211110000000 0011112456889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+||..||.+|||+.++++|-
T Consensus 265 i~~~L~~dP~~R~t~~e~l~hp 286 (362)
T 2bdw_A 265 IDSMLTVNPKKRITADQALKVP 286 (362)
T ss_dssp HHHHSCSSGGGSCCHHHHTTSH
T ss_pred HHHHcCCChhhCcCHHHHhcCc
Confidence 9999999999999999999873
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=350.10 Aligned_cols=252 Identities=21% Similarity=0.353 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCCh-------HHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDS-------RQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
..+.+.+.||+|+||.||+|.. .+++.||||++........ +.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 4568889999999999999995 5789999999976543221 67899999999999999999999986554
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-cccccccCCceeecCCCC-----CeeccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGR-ALYHDLNTYRILFDQDGN-----PRLSCFGL 199 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-iiH~Dlkp~Nill~~~~~-----~kl~Dfgl 199 (488)
++||||+++++|.+.+.. ....+++..++.++.|++.||.|||+.++ ++||||||+|||++.++. +||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 799999999999988864 44579999999999999999999999864 999999999999987776 99999999
Q ss_pred cccCCCC-CccccccCCCCccccc--cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh
Q 011349 200 MKNSRDG-KSYSTNLAFTPPEYLR--TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276 (488)
Q Consensus 200 a~~~~~~-~~~~~t~~y~aPE~~~--~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (488)
++..... ....+|+.|+|||.+. ...++.++|||||||++|||++|+.||.......... .............+.
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~ 253 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEGLRPTIPE 253 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSCCCCCCCT
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccCCCCCCCc
Confidence 9865443 2457899999999984 4567889999999999999999999886532211100 111112223334556
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.+++.+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 254 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 254 DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 6778999999999999999999999999998764
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-46 Score=368.62 Aligned_cols=249 Identities=19% Similarity=0.157 Sum_probs=207.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
..|.+++.||+|+||.||+|.. .+|+.||+|++..........+.+|+.+|+.++||||+++++++.+....++||||+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 4578899999999999999995 468999999998665444567999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec--CCCCCeeccCCCcccCCCCC---
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~--- 207 (488)
+||+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++......
T Consensus 131 ~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 208 (387)
T 1kob_A 131 SGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208 (387)
T ss_dssp CCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred CCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence 99999999864 3346999999999999999999999999 99999999999997 45789999999998765443
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||+||..||.............. .............++++.+|+.
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~~li~ 286 (387)
T 1kob_A 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR--CDWEFDEDAFSSVSPEAKDFIK 286 (387)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH--CCCCCCSSTTTTSCHHHHHHHH
T ss_pred eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCccccccCCHHHHHHHH
Confidence 34689999999999998999999999999999999999998875432211110000 0001111222345788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..||.+|||+.++++|
T Consensus 287 ~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 287 NLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTSCSSGGGSCCHHHHHTS
T ss_pred HHcCCChhHCcCHHHHhhC
Confidence 9999999999999999987
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-46 Score=362.31 Aligned_cols=251 Identities=16% Similarity=0.258 Sum_probs=203.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCc----EEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDR----WIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+++.||+|+||.||+|.+ .+++ .||+|.+.... ....+.+.+|+.++++++||||+++++++..+ ..++|
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v 94 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI 94 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEE
Confidence 467888999999999999994 3444 36888886543 23456899999999999999999999999765 47899
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
+||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 95 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp EECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred EEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 999999999999975 3467999999999999999999999999 9999999999999999999999999997654322
Q ss_pred -----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||....... ....+........+..++..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 247 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTID 247 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HHHHHHTTCCCCCCTTBCHH
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-----HHHHHHcCCCCCCCccCCHH
Confidence 2345778999999999999999999999999999999 888876532221 12222222233445567788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 248 ~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999988764
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-46 Score=364.19 Aligned_cols=256 Identities=21% Similarity=0.283 Sum_probs=208.0
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
..+.+++.||+|+||.||+|.. .++..||||+++... ....+.+.+|+.++.++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 4568889999999999999995 245679999997543 23356799999999999 899999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCce
Q 011349 126 LLVAEFMPNETLSKHLFHWEN---------------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Ni 184 (488)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+||
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NI 203 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNV 203 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGE
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhE
Confidence 999999999999999975322 24899999999999999999999999 99999999999
Q ss_pred eecCCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhh
Q 011349 185 LFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLI 257 (488)
Q Consensus 185 ll~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~ 257 (488)
|++.++.+||+|||++....... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..||.......
T Consensus 204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~- 282 (344)
T 1rjb_A 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA- 282 (344)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH-
Confidence 99999999999999998654332 3345788999999998899999999999999999998 888876542111
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
.....+........+...++++.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 283 ---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 283 ---NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp ---HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ---HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 111112222233345556789999999999999999999999999999887654
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=373.56 Aligned_cols=255 Identities=20% Similarity=0.157 Sum_probs=208.3
Q ss_pred HHHhcCCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecC
Q 011349 47 RAATSGFCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG 122 (488)
Q Consensus 47 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 122 (488)
....-....+.+++.||+|+||.||+|... +++.||||+++... ....+.+.+|+.++..++|||||++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 333444567789999999999999999954 68899999986421 12345688999999999999999999999999
Q ss_pred CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCccc
Q 011349 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 123 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
+..|+||||++||+|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||+++.
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 999999999999999999853 46999999999999999999999999 99999999999999999999999999987
Q ss_pred CCCC-----CccccccCCCCccccccCC----cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC
Q 011349 203 SRDG-----KSYSTNLAFTPPEYLRTGR----VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 203 ~~~~-----~~~~~t~~y~aPE~~~~~~----~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
.... ....||+.|+|||++.+.. ++.++|||||||++|||+||+.||................. ....+
T Consensus 218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~p 295 (410)
T 3v8s_A 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN--SLTFP 295 (410)
T ss_dssp CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH--HCCCC
T ss_pred eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccc--cccCC
Confidence 6543 2567999999999998755 88999999999999999999999876533221111111000 01111
Q ss_pred CChhhHHHHHHHHHHhccCCCCC--CCCHHHHHHHh
Q 011349 274 FSNDDGTELVRLASRCLQYEPRE--RPNAKSLVASL 307 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~--Rps~~~il~~l 307 (488)
.....++++.+||.+||..+|.+ ||++++|++|-
T Consensus 296 ~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 296 DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 12245688999999999999988 99999999984
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=353.56 Aligned_cols=250 Identities=18% Similarity=0.219 Sum_probs=201.1
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+++.||+|+||.||+|...+|+.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46788999999999999999987899999999975432 2246788999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
++ ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 82 LD-QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp CS-EEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 97 599988864 3467999999999999999999999999 999999999999999999999999998765322 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------ccc-----ccccc-
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------FLM-----LMDSC- 269 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------~~~-----~~~~~- 269 (488)
...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||............ +.. ..++.
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 4467999999999976 45899999999999999999999988654221110000 000 00000
Q ss_pred ------cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 270 ------LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 270 ------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.........++++.+|+.+||+.||++|||+.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0001123456889999999999999999999999986
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-46 Score=363.96 Aligned_cols=246 Identities=20% Similarity=0.213 Sum_probs=205.6
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.+++.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence 56788899999999999994 679999999997654332 34688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 211 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 211 (488)
+. |+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.........|
T Consensus 136 ~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g 212 (348)
T 1u5q_A 136 CL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 212 (348)
T ss_dssp CS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred CC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence 97 688887753 3467999999999999999999999999 99999999999999999999999999998877777889
Q ss_pred ccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 212 NLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 212 t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
|+.|+|||++. +..++.++|||||||++|||+||+.||......... ..+.........+...+..+.+++.+
T Consensus 213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (348)
T 1u5q_A 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----YHIAQNESPALQSGHWSEYFRNFVDS 288 (348)
T ss_dssp CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHSCCCCCCCTTSCHHHHHHHHH
T ss_pred CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH----HHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence 99999999985 467899999999999999999999987654221111 01111111112233456789999999
Q ss_pred hccCCCCCCCCHHHHHHHhc
Q 011349 289 CLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~ 308 (488)
||+.||++|||+.+++++..
T Consensus 289 ~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 289 CLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp HTCSSGGGSCCHHHHTTCHH
T ss_pred HcccChhhCcCHHHHhhChh
Confidence 99999999999999998754
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-46 Score=358.21 Aligned_cols=256 Identities=21% Similarity=0.320 Sum_probs=212.2
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
+.+.+.+.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.+++++ +||||+++++++..++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 3567889999999999999984 34678999999865432 246799999999999 899999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 126 LLVAEFMPNETLSKHLFHWEN----------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ ++||||||+||+++.+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCC
Confidence 999999999999999975332 25999999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 262 (488)
+.+||+|||+++...... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..|+....... ..
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~ 257 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS----KF 257 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH----HH
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh----HH
Confidence 999999999998765432 2345788999999998899999999999999999999 888775532111 11
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...+........+...+..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 1111122222334456788999999999999999999999999999887653
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=364.16 Aligned_cols=259 Identities=21% Similarity=0.269 Sum_probs=211.9
Q ss_pred cccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccccccee--cCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC--EGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~l 127 (488)
.+.+++.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++. .....++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 567889999999999999984 358899999998765445567999999999999999999999886 4556899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++++|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 104 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp EEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred EEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 99999999999999642 346999999999999999999999999 9999999999999999999999999998664332
Q ss_pred -------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc----------ccccccccccc
Q 011349 208 -------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG----------KNFLMLMDSCL 270 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~----------~~~~~~~~~~~ 270 (488)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..|+.......... ......+....
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ 261 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC
T ss_pred ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc
Confidence 3356778999999998889999999999999999999998876543322111 11111222223
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
....+..+++.+.+|+.+||+.||.+|||+.+++++|+.+.....
T Consensus 262 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 262 RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 344556678899999999999999999999999999998876543
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-46 Score=363.82 Aligned_cols=245 Identities=20% Similarity=0.264 Sum_probs=206.9
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+.+++.||+|+||.||+|... +++.||||+++... ....+.+..|..++..+ +||||+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 456789999999999999999964 58899999997532 23456788999999988 79999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|++||+|||+++....
T Consensus 99 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 9999999999999973 356999999999999999999999999 99999999999999999999999999986432
Q ss_pred --CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+... ...++...+.++.
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~----~i~~~--~~~~p~~~s~~~~ 249 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ----SIMEH--NVAYPKSMSKEAV 249 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHC--CCCCCTTSCHHHH
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH----HHHhC--CCCCCCCCCHHHH
Confidence 235678999999999999999999999999999999999999987643322111 11111 1234556678999
Q ss_pred HHHHHhccCCCCCCCC-----HHHHHHH
Q 011349 284 RLASRCLQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps-----~~~il~~ 306 (488)
+|+.+||..||.+||+ +.++++|
T Consensus 250 ~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 250 AICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred HHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 9999999999999995 5888877
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=361.82 Aligned_cols=249 Identities=16% Similarity=0.236 Sum_probs=204.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhc-CCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 127 (488)
...+.+++.||+|+||.||+|+. .+++.||||+++...... .+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 34578899999999999999995 468899999997654332 34688999999988 89999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999999873 456999999999999999999999999 99999999999999999999999999986432
Q ss_pred --CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----cccccccccccCCCCChhh
Q 011349 206 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----KNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 206 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 278 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .....+... ...++...
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~ 242 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSL 242 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTS
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCC
Confidence 235678999999999999999999999999999999999999885421110000 000011111 12345566
Q ss_pred HHHHHHHHHHhccCCCCCCCCH------HHHHHH
Q 011349 279 GTELVRLASRCLQYEPRERPNA------KSLVAS 306 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~------~~il~~ 306 (488)
+.++.+|+.+||..||.+||++ .++++|
T Consensus 243 s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 7889999999999999999995 678776
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-46 Score=359.81 Aligned_cols=258 Identities=18% Similarity=0.237 Sum_probs=196.6
Q ss_pred CcccccccCCCCCCceEEEEEeCC-Cc---EEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCee--
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE-DR---WIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER-- 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~---~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 125 (488)
..+.+++.||+|+||.||+|.... +. .||||+++... ....+.+.+|+.++++++||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 346788899999999999999543 32 79999997653 23356799999999999999999999999876654
Q ss_pred ----eEEEecCCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccC
Q 011349 126 ----LLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197 (488)
Q Consensus 126 ----~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 197 (488)
++||||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeec
Confidence 9999999999999998632 1236999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccccccc
Q 011349 198 GLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 198 gla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
|+++...... ...+++.|+|||.+.+..++.++|||||||++|||+| |..||......... ..+....
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~-----~~~~~~~ 256 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY-----NYLIGGN 256 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-----HHHHTTC
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH-----HHHhcCC
Confidence 9998654322 3345778999999999999999999999999999999 78777553221111 1111111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
....+...+..+.+++.+||+.||.+|||+.++++.|+.+.......
T Consensus 257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~ 303 (323)
T 3qup_A 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL 303 (323)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence 22344556788999999999999999999999999999998765433
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=367.72 Aligned_cols=252 Identities=18% Similarity=0.190 Sum_probs=203.1
Q ss_pred CcccccccCCCC--CCceEEEEEeC-CCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEK--APNVVYKGLVD-EDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+.|.+++.||+| +||.||+|... +|+.||||+++...... .+.+.+|+.+++.++|||||++++++.+++..++|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 457889999999 99999999954 69999999997654222 35688899999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 205 (488)
|||+++|+|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 99999999999997655577999999999999999999999999 99999999999999999999999998754321
Q ss_pred --------CCccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccc----c----
Q 011349 206 --------GKSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM----D---- 267 (488)
Q Consensus 206 --------~~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~----~---- 267 (488)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||................+ +
T Consensus 184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (389)
T 3gni_B 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTI 263 (389)
T ss_dssp ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------
T ss_pred cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccc
Confidence 123467899999999987 5789999999999999999999999865322111100000000 0
Q ss_pred --------------------------------cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 268 --------------------------------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 268 --------------------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.......+...++.+.+|+.+||+.||.+|||+.++++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 264 PAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000011233456789999999999999999999999988
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-46 Score=366.83 Aligned_cols=244 Identities=18% Similarity=0.121 Sum_probs=198.2
Q ss_pred cccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 59 VSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
.+.||+|+||.||+|.. .+|+.||||+++.......+.+.+|+.++++++||||+++++++...+..++||||++|++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56789999999999994 56999999999876545567899999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee--cCCCCCeeccCCCcccCCCC---Cccccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF--DQDGNPRLSCFGLMKNSRDG---KSYSTN 212 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill--~~~~~~kl~Dfgla~~~~~~---~~~~~t 212 (488)
.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..... ....||
T Consensus 174 ~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt 251 (373)
T 2x4f_A 174 FDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGT 251 (373)
T ss_dssp HHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSS
T ss_pred HHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCC
Confidence 998864 3456999999999999999999999999 9999999999999 56788999999999876543 234689
Q ss_pred cCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC
Q 011349 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292 (488)
Q Consensus 213 ~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 292 (488)
+.|+|||++.+..++.++|||||||++|||+||..||.................. .........++++.+|+.+||..
T Consensus 252 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~~L~~ 329 (373)
T 2x4f_A 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--LEDEEFQDISEEAKEFISKLLIK 329 (373)
T ss_dssp CTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--SCSGGGTTSCHHHHHHHHTTSCS
T ss_pred CcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CChhhhccCCHHHHHHHHHHcCC
Confidence 9999999999888999999999999999999999998764322111111100000 00111123567899999999999
Q ss_pred CCCCCCCHHHHHHH
Q 011349 293 EPRERPNAKSLVAS 306 (488)
Q Consensus 293 dp~~Rps~~~il~~ 306 (488)
||.+|||+.++++|
T Consensus 330 dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 330 EKSWRISASEALKH 343 (373)
T ss_dssp SGGGSCCHHHHHHS
T ss_pred ChhhCCCHHHHhcC
Confidence 99999999999986
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=351.93 Aligned_cols=252 Identities=21% Similarity=0.264 Sum_probs=198.5
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
..+.+.+.||+|+||.||+|.... +..||||++...... ..+.+.+|+.++++++||||+++++++ ..+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEE
Confidence 456788999999999999998532 456999998764322 245789999999999999999999987 45678999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 94 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999999999964 3456999999999999999999999999 9999999999999999999999999998664432
Q ss_pred ----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
...+|+.|+|||.+.+..++.++|||||||++|||++ |..||........ ...+........+..+++.+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~-----~~~i~~~~~~~~~~~~~~~l 246 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-----IGRIENGERLPMPPNCPPTL 246 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----HHHHHTTCCCCCCTTCCHHH
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH-----HHHHHcCCCCCCCCCCCHHH
Confidence 2345678999999998899999999999999999997 8877764322111 11111112223455677899
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+++.+||+.||++|||+.++++.|+.+...
T Consensus 247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 247 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987653
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=351.61 Aligned_cols=253 Identities=21% Similarity=0.302 Sum_probs=211.4
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+.+++.||+|+||.||+|...++..||||+++... ...+.+.+|++++++++||||+++++++. .+..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCC
Confidence 4567889999999999999998888899999997654 34678999999999999999999999876 456899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 999999996432336999999999999999999999999 9999999999999999999999999998664432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+++.|+|||.+.+..++.++||||||+++|||+| |..|+......... ..+........+...+..+.+++.
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~ 244 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-----QNLERGYRMVRPDNCPEELYQLMR 244 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHH-----HHHhcccCCCCcccccHHHHHHHH
Confidence 345778999999998889999999999999999999 88777654222111 111111222334556788999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+||+.||++|||+.++++.|+.+....
T Consensus 245 ~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 245 LCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999887654
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=358.37 Aligned_cols=254 Identities=20% Similarity=0.281 Sum_probs=204.7
Q ss_pred cccccccCCCCCCceEEEEEeCC-----CcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDE-----DRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+.||+|+||.||+|.... +..||||+++..... ....+.+|+.++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 45667889999999999998532 235999999765422 234689999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 125 TEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp EECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 999999999999964 3467999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...+|+.|+|||.+.+..++.++|||||||++|||+| |+.||......... ..+........+..++.
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 277 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-----KAINDGFRLPTPMDCPS 277 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-----HHHHTTCCCCCCTTCBH
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHH-----HHHHCCCcCCCcccCCH
Confidence 2234678999999998899999999999999999999 88887654222111 11111122233455678
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
.+.+++.+||+.||.+||++.++++.|+.+.....
T Consensus 278 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 278 AIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 89999999999999999999999999998876543
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=358.35 Aligned_cols=245 Identities=18% Similarity=0.231 Sum_probs=198.8
Q ss_pred CcccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCCC----CChHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSAW----PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
+.|.+++.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.+|+.++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 4568889999999999999996 4789999999976532 2345688999999999999999999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 999999999999999973 456999999999999999999999999 99999999999999999999999999875432
Q ss_pred C----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 206 G----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 206 ~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
. ....||+.|+|||.+.+..++.++|||||||++|||++|+.||........... +... ...++...+.+
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~----i~~~--~~~~p~~~~~~ 247 (327)
T 3a62_A 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDK----ILKC--KLNLPPYLTQE 247 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHT--CCCCCTTSCHH
T ss_pred CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhC--CCCCCCCCCHH
Confidence 2 345789999999999988899999999999999999999999876432221111 1111 12234456788
Q ss_pred HHHHHHHhccCCCCCCC-----CHHHHHHHh
Q 011349 282 LVRLASRCLQYEPRERP-----NAKSLVASL 307 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rp-----s~~~il~~l 307 (488)
+.+++.+||..||.+|| ++.++++|-
T Consensus 248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp 278 (327)
T 3a62_A 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278 (327)
T ss_dssp HHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred HHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence 99999999999999999 788998873
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-45 Score=349.23 Aligned_cols=253 Identities=21% Similarity=0.259 Sum_probs=206.4
Q ss_pred cccccCCCCCCceEEEEEe-CCCc---EEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCee-eEEEe
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDR---WIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER-LLVAE 130 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~---~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv~e 130 (488)
.+.+.||+|+||.||+|.+ .++. .||||+++.... ...+.+.+|+.++++++||||+++++++.+.+.. ++|||
T Consensus 24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 103 (298)
T 3pls_A 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP 103 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence 3447899999999999984 3333 699999976442 2245789999999999999999999999876655 99999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----- 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 205 (488)
|+.+++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 104 ~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (298)
T 3pls_A 104 YMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181 (298)
T ss_dssp CCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred cccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence 9999999999964 3567899999999999999999999999 99999999999999999999999999975432
Q ss_pred ---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 206 ---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 206 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
.....+|+.|+|||.+.+..++.++|||||||++|+|+||..|+...... ......+........+...+..+
T Consensus 182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l 257 (298)
T 3pls_A 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLTHFLAQGRRLPQPEYCPDSL 257 (298)
T ss_dssp SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHHHHHHTTCCCCCCTTCCHHH
T ss_pred cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHHHHhhcCCCCCCCccchHHH
Confidence 22345688999999999999999999999999999999977665433111 11111122222233445567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 258 ~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 258 YQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999887654
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=360.62 Aligned_cols=247 Identities=18% Similarity=0.210 Sum_probs=203.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCC-----CCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRS-----AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.|.+++.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 468889999999999999995 56899999998632 122457899999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC---CeeccCCCcccC
Q 011349 129 AEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNS 203 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~ 203 (488)
|||++|++|.+.+... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++..
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999999998877542 3446899999999999999999999999 999999999999976554 999999999876
Q ss_pred CCC----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC--CCChh
Q 011349 204 RDG----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSND 277 (488)
Q Consensus 204 ~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 277 (488)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.......... +....... .....
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-----i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG-----IIKGKYKMNPRQWSH 258 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHH-----HHHTCCCCCHHHHTT
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHH-----HHcCCCCCCcccccc
Confidence 543 24568999999999999899999999999999999999999987643221111 11000000 00013
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.+.++.+|+.+||..||++|||+.++++|-
T Consensus 259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp 288 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLDPAERITVYEALNHP 288 (351)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcCh
Confidence 467899999999999999999999999873
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=361.18 Aligned_cols=245 Identities=19% Similarity=0.216 Sum_probs=189.7
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
|.+.+.||+|+||.||+|... +++.||||+++... ..+.+.+|+.++++++||||+++++++...+..++||||++|
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 132 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence 577889999999999999964 58899999997643 346788999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCCCC---Cc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG---KS 208 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~---~~ 208 (488)
++|.+++. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++..... ..
T Consensus 133 ~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (349)
T 2w4o_A 133 GELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT 209 (349)
T ss_dssp CBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCccccccc
Confidence 99999986 4566999999999999999999999999 999999999999975 889999999999865443 34
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..||+.|+|||++.+..++.++|||||||++|||++|..||............+... ............+.++.+|+.+
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~ 288 (349)
T 2w4o_A 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-EYYFISPWWDEVSLNAKDLVRK 288 (349)
T ss_dssp ---CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTT-CCCCCTTTTTTSCHHHHHHHHT
T ss_pred ccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhC-CCccCCchhhhCCHHHHHHHHH
Confidence 568999999999999899999999999999999999999886543221111000000 0001112223457889999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..||++|||+.++++|
T Consensus 289 ~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 289 LIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TSCSSGGGSCCHHHHHHS
T ss_pred HccCChhhCcCHHHHhcC
Confidence 999999999999999987
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=353.17 Aligned_cols=257 Identities=15% Similarity=0.131 Sum_probs=209.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.|.+++.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++.+ +|+|++++++++......++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 3568889999999999999994 679999999987543 345688999999999 799999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC-----CeeccCCCcccCCCC
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN-----PRLSCFGLMKNSRDG 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfgla~~~~~~ 206 (488)
+ +++|.+++.. .+..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 88 ~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 88 L-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred c-CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 9 8999999975 3456999999999999999999999999 999999999999987765 999999999865432
Q ss_pred -----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh--hccccccccccccCCC
Q 011349 207 -----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--RGKNFLMLMDSCLEGH 273 (488)
Q Consensus 207 -----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~ 273 (488)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ................
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 244 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH
Confidence 244689999999999998999999999999999999999998865311000 0000000000000011
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
....+++++.+++.+||+.||++|||+.+|++.|+.+.....
T Consensus 245 ~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 245 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 122456789999999999999999999999999999887654
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=367.65 Aligned_cols=248 Identities=15% Similarity=0.118 Sum_probs=193.8
Q ss_pred ccccc-ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceec----CCeeeE
Q 011349 55 ADNIV-SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCE----GEERLL 127 (488)
Q Consensus 55 ~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~~~~l 127 (488)
.|.++ +.||+|+||.||+|.. .+++.||||+++. ...+.+|+.++.++ +||||+++++++.. ....++
T Consensus 62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 44555 5799999999999995 4689999999963 35678899998555 89999999998865 567899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSR 204 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~ 204 (488)
||||++||+|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 137 v~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 999999999999997544557999999999999999999999999 999999999999987 7899999999998655
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccc--cCCCCChhhH
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSC--LEGHFSNDDG 279 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 279 (488)
.. ....||+.|+|||++.+..++.++|||||||++|||++|..||...............+.... ........++
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s 295 (400)
T 1nxk_A 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSC
T ss_pred CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCC
Confidence 33 345789999999999999999999999999999999999998865421111000000111000 0111113457
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.++.+||.+||..||.+|||+.++++|-.
T Consensus 296 ~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 88999999999999999999999999854
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=350.65 Aligned_cols=254 Identities=20% Similarity=0.269 Sum_probs=195.6
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.+.+.+.||+|+||.||+|.... .||||+++...... .+.+.+|+.++++++||||+++++++ .....++||||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 356788999999999999998533 49999997654322 35789999999999999999999965 55678999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 206 (488)
+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 101 CEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred cCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 999999999854 3466999999999999999999999999 999999999999999999999999998754321
Q ss_pred -CccccccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 -KSYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
....||+.|+|||.+. +..++.++|||||||++|+|++|+.||............................+++.+
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHH
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHH
Confidence 2346899999999986 567888999999999999999999988653221110000000000011112334567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+|+.+||+.||.+|||+.++++.|+.+.+
T Consensus 259 ~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 259 KRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 999999999999999999999999998764
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=381.75 Aligned_cols=252 Identities=24% Similarity=0.318 Sum_probs=212.5
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
.+.+.+.||+|+||.||+|.+..+..||||+++... ...+.|.+|+.+|++++||||+++++++.+ +..+|||||+++
T Consensus 268 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~ 345 (535)
T 2h8h_A 268 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 345 (535)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred hhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcC
Confidence 456788899999999999998888889999998655 346789999999999999999999999865 678999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Ccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KSY 209 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~~ 209 (488)
|+|.+++.......+++.+++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 346 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 424 (535)
T 2h8h_A 346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 424 (535)
T ss_dssp EEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCST
T ss_pred CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCC
Confidence 99999997533456999999999999999999999999 999999999999999999999999999876432 233
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.++..|+|||.+.+..++.++|||||||++|||+| |+.||........ ...+....+...+..++..+.+||.+
T Consensus 425 ~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~l~~li~~ 499 (535)
T 2h8h_A 425 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQVERGYRMPCPPECPESLHDLMCQ 499 (535)
T ss_dssp TSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH-----HHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 45788999999998899999999999999999999 8887765422211 11111222333455677899999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhccc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
||+.||++|||+.+|++.|+.+....
T Consensus 500 cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 500 CWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 99999999999999999999887654
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-46 Score=376.16 Aligned_cols=245 Identities=20% Similarity=0.246 Sum_probs=199.3
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCC---CCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRS---AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+++.||+|+||.||+|. ..+|+.||||+++.. .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 3467889999999999999999 456899999999753 223345688999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999999863 4579999999999999999999998 88 99999999999999999999999999986432
Q ss_pred --CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 --GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 --~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.............. . ...++...++++.
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~----~--~~~~p~~~~~~~~ 377 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM----E--EIRFPRTLGPEAK 377 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----C--CCCCCTTSCHHHH
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHh----C--CCCCCccCCHHHH
Confidence 2356789999999999999999999999999999999999999866533222111111 1 1224455678899
Q ss_pred HHHHHhccCCCCCCC-----CHHHHHHH
Q 011349 284 RLASRCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rp-----s~~~il~~ 306 (488)
+|+.+||+.||.+|| ++.++++|
T Consensus 378 ~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 999999999999999 99999987
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=357.25 Aligned_cols=255 Identities=22% Similarity=0.313 Sum_probs=211.3
Q ss_pred cccccCCCCCCceEEEEEeC-----CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeEE
Q 011349 57 NIVSEHGEKAPNVVYKGLVD-----EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLLV 128 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 128 (488)
.+++.||+|+||.||++.+. +++.||||+++..... ..+.+.+|+.++++++||||+++++++.+. ...++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 78899999999999988642 6888999999865422 245789999999999999999999999874 578999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++++|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 114 ~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 189 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189 (318)
T ss_dssp ECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred EecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence 999999999999953 45999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh----------hccccccccccccC
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI----------RGKNFLMLMDSCLE 271 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~----------~~~~~~~~~~~~~~ 271 (488)
...+|+.|+|||.+.+..++.++|||||||++|+|+||..|+........ ........+.....
T Consensus 190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (318)
T 3lxp_A 190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 269 (318)
T ss_dssp EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC
T ss_pred ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC
Confidence 33567889999999988999999999999999999999988754322111 01111222223333
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
...+..++..+.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 270 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 44556678899999999999999999999999999999877643
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-45 Score=359.63 Aligned_cols=247 Identities=19% Similarity=0.273 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCC--CCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRS--ERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.+++.||+|+||.||+|...+++.||||++....... .+.+.+|+.+|.+++| |||+++++++..+...++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 3578899999999999999998889999999997654322 3578999999999976 99999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
|+ .+++|.+++.. ...+++.++..++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 95 57899999974 567999999999999999999999999 99999999999997 678999999999866432
Q ss_pred ---CccccccCCCCcccccc-----------CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC
Q 011349 207 ---KSYSTNLAFTPPEYLRT-----------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~-----------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ......++.....
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~ 240 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEI 240 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHHHHCTTSCC
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH---HHHHHHhcCCccc
Confidence 24568999999999865 678889999999999999999999886432111 1112222333333
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.++...+..+.+|+.+||+.||.+|||+.++++|..
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 455555678999999999999999999999999853
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=358.07 Aligned_cols=256 Identities=20% Similarity=0.307 Sum_probs=210.7
Q ss_pred CcccccccCCCCCCceEEEEEe--------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV--------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 123 (488)
+.+.+++.||+|+||.||+|.. .++..||||+++..... ..+.+.+|+.+++++ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 4568889999999999999985 34678999999865422 245789999999999 8999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.+
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 193 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTT
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCC
Confidence 9999999999999999997432 124899999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 262 (488)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|||+| |..|+.........
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---- 269 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---- 269 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH----
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH----
Confidence 999999999998654422 3345788999999988889999999999999999999 88887654322211
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..+........+..++..+.+++.+||+.||.+|||+.+++++|+.+.....
T Consensus 270 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 270 -KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp -HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -HHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 1111112223445567889999999999999999999999999999877543
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=355.16 Aligned_cols=251 Identities=22% Similarity=0.274 Sum_probs=190.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.|.+++.||+|+||.||+|.. .+|+.||||+++.... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 4568889999999999999994 5689999999976542 2346789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 132 MPNETLSKHLFHW----ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
++ ++|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 98 6999988642 2246999999999999999999999999 999999999999999999999999999865422
Q ss_pred ---CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-------cccc---------
Q 011349 207 ---KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------LMLM--------- 266 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-------~~~~--------- 266 (488)
....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||............. ...+
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T 2pmi_A 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242 (317)
T ss_dssp CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhc
Confidence 34578999999999976 468999999999999999999999987543221100000 0000
Q ss_pred cc------------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 DS------------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ~~------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ..........+.++.+|+.+||+.||++|||+.++++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 00001112345789999999999999999999999987
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=350.64 Aligned_cols=252 Identities=22% Similarity=0.320 Sum_probs=203.8
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC-CeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG-EERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~ 131 (488)
+..+.+++.||+|+||.||+|.. +|+.||||+++... ..+.+.+|+.++++++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 45678899999999999999987 58889999997543 457899999999999999999999987654 478999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Cccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYS 210 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 210 (488)
+++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 175 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 175 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCCC
Confidence 99999999997433334899999999999999999999999 999999999999999999999999998765443 2345
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
+++.|+|||.+.+..++.++||||||+++|||+| |..|+........ ...+........+...++.+.+++.+|
T Consensus 176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~~ 250 (278)
T 1byg_A 176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPRVEKGYKMDAPDGCPPAVYEVMKNC 250 (278)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH-----HHHHTTTCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHhcCCCCCCcccCCHHHHHHHHHH
Confidence 6889999999998899999999999999999998 8887765322111 111111222334556678999999999
Q ss_pred ccCCCCCCCCHHHHHHHhchhhcc
Q 011349 290 LQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
|+.||.+|||+.++++.|+.+...
T Consensus 251 l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 251 WHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcCChhhCCCHHHHHHHHHHHHhh
Confidence 999999999999999999988764
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=358.04 Aligned_cols=244 Identities=16% Similarity=0.229 Sum_probs=195.6
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCC---------
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGE--------- 123 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------- 123 (488)
.|.+++.||+|+||.||+|... +|+.||||+++..... ..+.+.+|+.+|++++||||+++++++.+..
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 4678899999999999999965 7999999999755432 3567999999999999999999999886543
Q ss_pred ------------------------------------------------eeeEEEecCCCCChhhhhccCCC-CCCCHHHH
Q 011349 124 ------------------------------------------------ERLLVAEFMPNETLSKHLFHWEN-QPMKWAMR 154 (488)
Q Consensus 124 ------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~ 154 (488)
..++||||++|++|.+++..... ...++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 166 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC 166 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence 27999999999999999974322 34567789
Q ss_pred HHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----------------CccccccCCCCc
Q 011349 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----------------KSYSTNLAFTPP 218 (488)
Q Consensus 155 ~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----------------~~~~~t~~y~aP 218 (488)
+.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+||
T Consensus 167 ~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 245 (332)
T 3qd2_B 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245 (332)
T ss_dssp HHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred HHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence 999999999999999999 999999999999999999999999999865443 234689999999
Q ss_pred cccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCC
Q 011349 219 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298 (488)
Q Consensus 219 E~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 298 (488)
|.+.+..++.++|||||||++|||++|..|+........ .. .....+......++.+.+++.+||+.||.+||
T Consensus 246 E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 318 (332)
T 3qd2_B 246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIIT------DV-RNLKFPLLFTQKYPQEHMMVQDMLSPSPTERP 318 (332)
T ss_dssp HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHH------HH-HTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSC
T ss_pred HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHH------Hh-hccCCCcccccCChhHHHHHHHHccCCCCcCC
Confidence 999999999999999999999999999765322111000 00 00000111123456789999999999999999
Q ss_pred CHHHHHHH
Q 011349 299 NAKSLVAS 306 (488)
Q Consensus 299 s~~~il~~ 306 (488)
|+.+++++
T Consensus 319 s~~~~l~~ 326 (332)
T 3qd2_B 319 EATDIIEN 326 (332)
T ss_dssp CHHHHHHS
T ss_pred CHHHHhhc
Confidence 99999986
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=355.09 Aligned_cols=240 Identities=21% Similarity=0.202 Sum_probs=195.8
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC--hHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD--SRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.++++||+|+||+||+|... +|+.||||++....... ...+..|+..+.++ +||||+++++++.+++..++|||
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e 137 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE 137 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence 3578889999999999999964 79999999987544222 23456667666666 89999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---C
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---K 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 207 (488)
|+ +++|.+++.. .+..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 138 ~~-~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 214 (311)
T 3p1a_A 138 LC-GPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE 214 (311)
T ss_dssp CC-CCBHHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred cc-CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence 99 6899998865 3456999999999999999999999999 999999999999999999999999998766443 2
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchh-hhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL-DLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...||+.|+|||++.+ .++.++|||||||++|||++|..|+..... ..... ......++...++++.+++
T Consensus 215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~li 285 (311)
T 3p1a_A 215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ--------GYLPPEFTAGLSSELRSVL 285 (311)
T ss_dssp CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTT--------TCCCHHHHTTSCHHHHHHH
T ss_pred ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhc--------cCCCcccccCCCHHHHHHH
Confidence 4468999999999885 789999999999999999999876654321 11111 1111112234567899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||+.||++|||+.+++++
T Consensus 286 ~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 286 VMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHHSCSSTTTSCCHHHHHTS
T ss_pred HHHcCCChhhCcCHHHHHhC
Confidence 99999999999999999986
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-45 Score=350.66 Aligned_cols=251 Identities=18% Similarity=0.185 Sum_probs=200.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-----CChHHHHHHHHHHhhcC---CCCCcccccceecCC-
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-----PDSRQFLEEARAVGLLR---SERLVNLIGCCCEGE- 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~- 123 (488)
+.|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+++.++ ||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 3568899999999999999994 6789999999874321 12356788888888775 999999999997654
Q ss_pred ----eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 124 ----ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 124 ----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
..++||||+. ++|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 4899999997 69999997655556999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCC---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccc-------cc---
Q 011349 200 MKNSRDGK---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM-------LM--- 266 (488)
Q Consensus 200 a~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-------~~--- 266 (488)
++...... ...||+.|+|||++.+..++.++|||||||++|||++|++||............... .+
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSS
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccch
Confidence 98665432 457799999999999999999999999999999999999988654322111100000 00
Q ss_pred ----ccccCC-------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 ----DSCLEG-------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 ----~~~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... ......+..+.+|+.+||+.||.+|||+.++++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000000 0112346789999999999999999999999987
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=364.49 Aligned_cols=259 Identities=14% Similarity=0.132 Sum_probs=204.6
Q ss_pred CcccccccCCCCCCceEEEEEeCC------CcEEEEEEccCCCCCC-----------hHHHHHHHHHHhhcCCCCCcccc
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE------DRWIAVKRFNRSAWPD-----------SRQFLEEARAVGLLRSERLVNLI 116 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~~~ 116 (488)
..|.+++.||+|+||.||+|.+.. ++.||||++....... ...+..|+..++.++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 357889999999999999998654 4789999987654111 11234556667777899999999
Q ss_pred cceecC----CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec--CCC
Q 011349 117 GCCCEG----EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDG 190 (488)
Q Consensus 117 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~--~~~ 190 (488)
+++... ...++||||+ |++|.+++.. ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++ .++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCC
Confidence 998764 4589999999 9999999975 3467999999999999999999999999 99999999999999 889
Q ss_pred CCeeccCCCcccCCCC-----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-
Q 011349 191 NPRLSCFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR- 258 (488)
Q Consensus 191 ~~kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~- 258 (488)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 9999999999754321 2345899999999999989999999999999999999999998753211100
Q ss_pred -------ccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCCC
Q 011349 259 -------GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPS 318 (488)
Q Consensus 259 -------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~~ 318 (488)
......+++..+. ....+.++.+++.+||..+|.+||++.+|++.|+.+........
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~ 335 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKD 335 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCc
Confidence 0111122222221 12346789999999999999999999999999999887655443
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=350.13 Aligned_cols=245 Identities=19% Similarity=0.277 Sum_probs=205.8
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec-------------
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE------------- 121 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------------- 121 (488)
+.+++.||+|+||.||+|... +++.||||+++... +.+.+|++++++++||||+++++++..
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 88 (284)
T 2a19_B 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSS 88 (284)
T ss_dssp EEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------
T ss_pred cceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccc
Confidence 577888999999999999964 79999999997543 567899999999999999999998854
Q ss_pred ---CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCC
Q 011349 122 ---GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198 (488)
Q Consensus 122 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 198 (488)
....++||||+++++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg 167 (284)
T 2a19_B 89 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDFG 167 (284)
T ss_dssp CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCT
T ss_pred ccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcch
Confidence 345899999999999999997555567999999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 199 LMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 199 la~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
++...... ....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+..... .. ..+ .....+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~~-----~~~----~~~~~~ 237 (284)
T 2a19_B 168 LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-FF-----TDL----RDGIIS 237 (284)
T ss_dssp TCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH-HH-----HHH----HTTCCC
T ss_pred hheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH-HH-----HHh----hccccc
Confidence 98876543 345689999999999998999999999999999999999977543211 00 011 111223
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
...+..+.+++.+||+.||.+|||+.+++++|+.+.+...
T Consensus 238 ~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 238 DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 3456789999999999999999999999999999887644
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-45 Score=371.14 Aligned_cols=244 Identities=19% Similarity=0.249 Sum_probs=207.0
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.|.+++.||+|+||.||+|... +|+.||||+++... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46788899999999999999954 79999999996432 223467899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~ 172 (476)
T 2y94_A 96 EYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172 (476)
T ss_dssp ECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence 9999999999996 4567999999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.......... .+.... ...+...++++.+|
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~----~i~~~~--~~~p~~~s~~~~~L 246 (476)
T 2y94_A 173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK----KICDGI--FYTPQYLNPSVISL 246 (476)
T ss_dssp CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHH----HHHTTC--CCCCTTCCHHHHHH
T ss_pred cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHH----HHhcCC--cCCCccCCHHHHHH
Confidence 35578999999999988765 689999999999999999999987543222111 111111 12334456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||..||.+|||+.++++|
T Consensus 247 i~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHcCCCchhCcCHHHHHhC
Confidence 999999999999999999987
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=357.12 Aligned_cols=252 Identities=16% Similarity=0.259 Sum_probs=203.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcE----EEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRW----IAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
..|.+++.||+|+||.||+|.+ .+++. ||+|.+.... ....+.+.+|+.++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 4568889999999999999994 44543 5778776443 334678999999999999999999999997654 889
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
|+||+.+|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 94 v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 9999999999999975 3456999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...+|+.|+|||.+.+..++.++|||||||++|||++ |..||....... ....+........+..++.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 246 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPICTI 246 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HHHHHHTTCCCCCCTTBCH
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHcCCCCCCCccCCH
Confidence 2345778999999999999999999999999999999 888876542221 1222222223344556778
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 899999999999999999999999999988754
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-45 Score=360.39 Aligned_cols=253 Identities=20% Similarity=0.256 Sum_probs=197.0
Q ss_pred ccccccCCCCCCceEEEEEeC--CC--cEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceec-CCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVD--ED--RWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCE-GEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~ 129 (488)
+.+.+.||+|+||.||+|.+. ++ ..||||.++.... ...+.+.+|+.++++++||||+++++++.. .+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 456788999999999999843 22 3589999875432 234679999999999999999999998754 46789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 171 e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 171 PYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp ECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred ECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 99999999999964 4456899999999999999999999999 999999999999999999999999999865332
Q ss_pred -----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhC-CCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 207 -----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
....+|+.|+|||.+.+..++.++|||||||++|||+|| .+|+..... ......+........+..++.
T Consensus 249 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~-----~~~~~~~~~~~~~~~p~~~~~ 323 (373)
T 3c1x_A 249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQPEYCPD 323 (373)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS-----SCHHHHHHTTCCCCCCTTCCH
T ss_pred cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCH
Confidence 123457789999999999999999999999999999995 444433211 111111111112233445678
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
.+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 324 ~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 324 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999887654
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=352.89 Aligned_cols=254 Identities=20% Similarity=0.296 Sum_probs=206.6
Q ss_pred ccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecC--CeeeE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG--EERLL 127 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~l 127 (488)
+.+++.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+.+++.++||||+++++++... ...++
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence 57888999999999999983 368899999997543 23457899999999999999999999999876 56899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 103 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 180 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180 (302)
T ss_dssp EEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence 9999999999999954 3456999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh----------hcccccccccccc
Q 011349 208 -------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI----------RGKNFLMLMDSCL 270 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~----------~~~~~~~~~~~~~ 270 (488)
...+|..|+|||.+.+..++.++|||||||++|+|+||..|+........ ........+....
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (302)
T 4e5w_A 181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260 (302)
T ss_dssp CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTC
T ss_pred cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccC
Confidence 34567889999999998999999999999999999999976533211100 0011111122222
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
....+...++.+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 261 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 261 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 33455567789999999999999999999999999998764
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=371.43 Aligned_cols=252 Identities=18% Similarity=0.134 Sum_probs=205.0
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
...+.+++.||+|+||.||+|... +++.||||+++... ......+.+|+.++..++||||++++++|.+.+..++|
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 345688899999999999999954 58889999986421 12234588999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||++||+|.+++.. ....+++..+..++.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++......
T Consensus 153 ~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp ECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred EecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999999999964 2467999999999999999999999999 9999999999999999999999999997654432
Q ss_pred ----ccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 208 ----SYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
...||+.|+|||++. +..++.++|||||||++|||+||+.||................ .....+......
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p~~~~~~ 309 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK-ERFQFPTQVTDV 309 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH-HHCCCCSSCCCS
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcc-ccccCCcccccC
Confidence 357899999999997 4678999999999999999999999987653322211111000 000111112235
Q ss_pred HHHHHHHHHHhccCCCCC--CCCHHHHHHHh
Q 011349 279 GTELVRLASRCLQYEPRE--RPNAKSLVASL 307 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~--Rps~~~il~~l 307 (488)
++++.+||.+||..+|++ ||+++++++|-
T Consensus 310 s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hp 340 (437)
T 4aw2_A 310 SENAKDLIRRLICSREHRLGQNGIEDFKKHP 340 (437)
T ss_dssp CHHHHHHHHTTSSCGGGCTTTTTTHHHHTSG
T ss_pred CHHHHHHHHHHhcccccccCCCCHHHHhCCC
Confidence 788999999999888888 99999999983
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=349.67 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=211.0
Q ss_pred cccccc-cCCCCCCceEEEEEeC---CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 55 ADNIVS-EHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 55 ~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.+.+++ .||+|+||.||+|.+. ++..||||+++.... ...+.+.+|+.++++++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 345665 8999999999999853 577899999986542 2345799999999999999999999998 556799999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 89 EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp ECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999999999864 3456999999999999999999999999 9999999999999999999999999998664322
Q ss_pred -----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 -----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...+|+.|+|||.+.+..++.++|||||||++|||+| |+.||........ ...+........+..+++.
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~ 241 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-----MAFIEQGKRMECPPECPPE 241 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH-----HHHHHTTCCCCCCTTCCHH
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH-----HHHHhcCCcCCCCCCcCHH
Confidence 2345788999999998889999999999999999999 9988765422211 1111112223445567889
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
+.+++.+||..||.+|||+.+++++|+.+..+...+
T Consensus 242 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 242 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999998776543
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-45 Score=348.91 Aligned_cols=256 Identities=20% Similarity=0.254 Sum_probs=204.9
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCccccccee-cCCeeeE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCC-EGEERLL 127 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~l 127 (488)
..+.+.+.||+|+||.||+|.... ...||||.++.... ...+.+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 356778899999999999998532 23589999876442 22457899999999999999999999864 4567899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999999999964 4566899999999999999999999999 999999999999999999999999999865432
Q ss_pred -------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 207 -------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 207 -------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+...... ......+........+...+
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 258 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCP 258 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT----TTHHHHHHTTCCCCCCTTCC
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH----HHHHHHHhcCCCCCCCccCC
Confidence 2345678899999999999999999999999999999966554332111 11111111111223344567
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 259 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 259 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 889999999999999999999999999999877543
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=356.04 Aligned_cols=252 Identities=18% Similarity=0.187 Sum_probs=197.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCe----e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEE----R 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~ 125 (488)
..|.+++.||+|+||.||+|.. .+++.||||+++...... ...+.+|+.++++++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 4578889999999999999994 678999999998764333 2468899999999999999999999876543 4
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||++|++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999999973 456999999999999999999999999 99999999999999999999999999976543
Q ss_pred C-------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 206 G-------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 206 ~-------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
. ....||+.|+|||++.+..++.++|||||||++|||+||+.||................... ........
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 246 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP--PSARHEGL 246 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC--HHHHSTTC
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC--cccccCCC
Confidence 2 23457999999999999999999999999999999999999987653322211111100000 00011234
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH-hchh
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVAS-LTPL 310 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~-l~~~ 310 (488)
+.++.+++.+||+.||.+||++.+++.+ +..+
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 6789999999999999999977766654 4444
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=360.71 Aligned_cols=257 Identities=19% Similarity=0.280 Sum_probs=209.8
Q ss_pred CCCcccccccCCCCCCceEEEEEeCC-C-----cEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDE-D-----RWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE 123 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 123 (488)
..+.+.+.+.||+|+||.||+|.... + ..||||++...... ..+.+.+|+.+++++ +||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 34567888999999999999999532 3 47999999765422 245789999999999 8999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWE------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~ 191 (488)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGE
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCe
Confidence 9999999999999999986421 346899999999999999999999999 999999999999999999
Q ss_pred CeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccc
Q 011349 192 PRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 192 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 264 (488)
+||+|||+++...... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..|+....... ....
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----~~~~ 278 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS----KFYK 278 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH----HHHH
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH----HHHH
Confidence 9999999998653322 3345788999999998899999999999999999999 877775432111 1111
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+........+...+..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 1122222233445578899999999999999999999999999887653
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=352.96 Aligned_cols=256 Identities=21% Similarity=0.266 Sum_probs=208.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcE--EEEEEccCCC-CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRW--IAVKRFNRSA-WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 128 (488)
+.+.+++.||+|+||.||+|.. .++.. ||||.++... ....+.+.+|+.+++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 4567888999999999999994 45664 4999987533 23356799999999999 899999999999999999999
Q ss_pred EecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCee
Q 011349 129 AEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 194 (488)
|||+++++|.+++.... ...+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEEE
Confidence 99999999999997422 247999999999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCC---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccccccccccc
Q 011349 195 SCFGLMKNSRD---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 195 ~Dfgla~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
+|||+++.... .....+++.|+|||.+.+..++.++|||||||++|||+| |+.||.......... .+....
T Consensus 184 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~-----~~~~~~ 258 (327)
T 1fvr_A 184 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE-----KLPQGY 258 (327)
T ss_dssp CCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----HGGGTC
T ss_pred cccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHH-----HhhcCC
Confidence 99999875432 223456789999999998889999999999999999998 988876543222111 111112
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
....+...++.+.+++.+||..||.+|||+.+++++|+.+.....
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 233445667889999999999999999999999999999877643
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-45 Score=353.28 Aligned_cols=247 Identities=16% Similarity=0.151 Sum_probs=205.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.|.+++.||+|+||.||+|.. .+|+.||||+++..... ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 357889999999999999995 46899999999765422 25679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC----CCeeccCCCcccC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNS 203 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 203 (488)
||||++|++|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++ .+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp EECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 999999999999997 4567999999999999999999999999 99999999999999887 7999999999876
Q ss_pred CCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 204 RDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 204 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
... ....||+.|+|||.+.+..++.++|||||||++|+|+||..||................. ..........+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~ 247 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY--DFDEEFFSHTSE 247 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTCCH
T ss_pred CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--ccChhhhcccCH
Confidence 543 345689999999999998999999999999999999999998865432221111000000 000001123457
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+.+++.+||..||.+|||+.++++|
T Consensus 248 ~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 248 LAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 89999999999999999999999986
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-45 Score=352.01 Aligned_cols=264 Identities=16% Similarity=0.188 Sum_probs=204.6
Q ss_pred cCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+..|.+++.||+|+||.||+|.. .+|+.||||++......+ ...+.+|+.++++++||||+++++++...+..+
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence 3455678999999999999999994 578999999997643222 456899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 127 LVAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
+||||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999988632 3567999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 205 DG----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 205 ~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
.. ....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||........... ..+.............+.
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 265 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSE 265 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH--HHHHTTCSCCCCTTTSCH
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH--HHhhcccCCCCcccccCH
Confidence 32 234678999999999998999999999999999999999998865422111000 000001111111234568
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
++.+++.+||+.||.+|||+.++++.|+.+......+
T Consensus 266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 8999999999999999999999999999998876543
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=350.08 Aligned_cols=261 Identities=17% Similarity=0.205 Sum_probs=203.8
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCC
Q 011349 48 AATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGE 123 (488)
Q Consensus 48 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 123 (488)
.....+..|.+++.||+|+||.||+|.. .+++.||||++......+ .+.+.+|+.++++++||||+++++++..++
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 2h34_A 28 REGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG 107 (309)
T ss_dssp ------CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred CCCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC
Confidence 4455678889999999999999999995 468899999997654322 357899999999999999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
..++||||++|++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 108 QLYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred eEEEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 99999999999999999973 456999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 204 RDG-----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 204 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
... ....+|+.|+|||.+.+..++.++||||||+++|||+||+.||........... ...... .....+...
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~--~~~~~~~~~ 261 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAH-INQAIP--RPSTVRPGI 261 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHH-HHSCCC--CGGGTSTTC
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHH-hccCCC--CccccCCCC
Confidence 432 244678999999999998999999999999999999999998876543321111 110000 011223455
Q ss_pred HHHHHHHHHHhccCCCCCCC-CHHHHHHHhchhhccc
Q 011349 279 GTELVRLASRCLQYEPRERP-NAKSLVASLTPLQKEA 314 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rp-s~~~il~~l~~~~~~~ 314 (488)
+..+.+++.+||+.||++|| +++++++.|+.+....
T Consensus 262 ~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 262 PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 67899999999999999999 9999999998776654
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-45 Score=361.54 Aligned_cols=240 Identities=20% Similarity=0.210 Sum_probs=193.6
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHH-HhhcCCCCCcccccceecCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARA-VGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+.+++.||+|+||.||+|+. .+++.||||+++.... .....+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 34578899999999999999995 4588999999975432 223456777776 577899999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC---
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR--- 204 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 204 (488)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999999973 456999999999999999999999999 9999999999999999999999999998632
Q ss_pred -CCCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 205 -DGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 205 -~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
......||+.|+|||++.+..++.++|||||||++|||++|..||.......... .++.. ...++...+..+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~----~i~~~--~~~~~~~~~~~~~ 267 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD----NILNK--PLQLKPNITNSAR 267 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHH----HHHHS--CCCCCSSSCHHHH
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH----HHHhc--ccCCCCCCCHHHH
Confidence 2345678999999999999999999999999999999999999987653322211 11111 1123445678899
Q ss_pred HHHHHhccCCCCCCCCHH
Q 011349 284 RLASRCLQYEPRERPNAK 301 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~ 301 (488)
+|+.+||+.||.+||++.
T Consensus 268 ~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 268 HLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp HHHHHHTCSSGGGSTTTT
T ss_pred HHHHHHcccCHHhCCCCC
Confidence 999999999999999974
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=360.03 Aligned_cols=255 Identities=17% Similarity=0.144 Sum_probs=198.0
Q ss_pred CcccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCC-----------ChHHHHHHHHHHhhcCCCCCcccccc
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWP-----------DSRQFLEEARAVGLLRSERLVNLIGC 118 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~~ 118 (488)
..|.+++.||+|+||.||+|... ++..||||++...... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 46788999999999999999964 5778999999765422 12346788899999999999999999
Q ss_pred eec----CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC--CC
Q 011349 119 CCE----GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG--NP 192 (488)
Q Consensus 119 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~--~~ 192 (488)
+.. ....++||||+ |++|.+++.. ...+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcE
Confidence 987 67899999999 9999999974 347999999999999999999999999 99999999999998877 99
Q ss_pred eeccCCCcccCCCC-----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-
Q 011349 193 RLSCFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK- 260 (488)
Q Consensus 193 kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~- 260 (488)
||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||...........
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 99999999765321 234689999999999998899999999999999999999998854311111000
Q ss_pred ---ccccccccccCC-CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 261 ---NFLMLMDSCLEG-HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 261 ---~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.....+...... ......+.++.+++.+||..||++|||+.+|++.|+.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 000001100000 0011456789999999999999999999999999987655
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=377.32 Aligned_cols=250 Identities=20% Similarity=0.244 Sum_probs=209.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.+.+++.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+|+.++|||||++++++.+.+..++||
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 4567888999999999999995 479999999986432 234567889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 207 (488)
||++||+|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++......
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~ 342 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCccc
Confidence 9999999999997655556999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...||+.|+|||++.+..++.++|||||||++|||++|..||......... ..+...+. .....++...++++.+|+
T Consensus 343 ~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~-~~i~~~i~-~~~~~~p~~~s~~~~dLI 420 (576)
T 2acx_A 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVK-EVPEEYSERFSPQARSLC 420 (576)
T ss_dssp ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH-HHHHHHHH-HCCCCCCTTSCHHHHHHH
T ss_pred cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH-HHHHHHhh-cccccCCccCCHHHHHHH
Confidence 457899999999999988999999999999999999999998654211000 00011111 112234556678999999
Q ss_pred HHhccCCCCCCC-----CHHHHHHH
Q 011349 287 SRCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rp-----s~~~il~~ 306 (488)
.+||..||.+|| ++.++++|
T Consensus 421 ~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 421 SQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHhccCCHHHcCCCCCCCHHHHHhC
Confidence 999999999999 78999987
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=361.98 Aligned_cols=245 Identities=20% Similarity=0.279 Sum_probs=200.8
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcC--CCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLR--SERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|...+++.||||++...... ..+.+.+|+.+|++++ ||||+++++++...+..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 37889999999999999999777999999999765432 2457899999999996 5999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
+.+++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 137 -~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 137 -CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp -CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred -cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 457999999974 457899999999999999999999999 99999999999996 589999999999876432
Q ss_pred --CccccccCCCCcccccc-----------CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC
Q 011349 207 --KSYSTNLAFTPPEYLRT-----------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~-----------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+..+++......
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIE 288 (390)
T ss_dssp --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHCTTSCCC
T ss_pred cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhCccccCC
Confidence 24568999999999865 368889999999999999999999886532111 11122222222333
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
++...+.++.+|+.+||..||.+|||+.+++++-
T Consensus 289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 4444567899999999999999999999999884
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-45 Score=352.62 Aligned_cols=257 Identities=19% Similarity=0.250 Sum_probs=206.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccccccee----cCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC----EGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~lv 128 (488)
..|.+++.||+|+||.||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4578899999999999999995 679999999987655445667999999999999999999999987 34578999
Q ss_pred EecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 129 AEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
|||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 9999999999988642 3567999999999999999999999999 999999999999999999999999998765421
Q ss_pred C-------------ccccccCCCCccccccCC---cccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc
Q 011349 207 K-------------SYSTNLAFTPPEYLRTGR---VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 207 ~-------------~~~~t~~y~aPE~~~~~~---~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
. ...||+.|+|||.+.+.. ++.++|||||||++|||++|+.||...... ............
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~ 264 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQNQL 264 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHHCC-
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhhccC
Confidence 1 234589999999997644 688999999999999999999887532111 011111111111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
....+...+..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 265 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 265 SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 22233455788999999999999999999999999999887643
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-45 Score=360.54 Aligned_cols=262 Identities=18% Similarity=0.152 Sum_probs=206.5
Q ss_pred cccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-----CCCC
Q 011349 39 REFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-----SERL 112 (488)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~ni 112 (488)
..|++.+.....+ .|.++++||+|+||.||+|.. .+++.||||+++... ...+.+..|+.+++.+. ||||
T Consensus 23 ~~~~~~~g~~~~~---~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~i 98 (360)
T 3llt_A 23 VHFSWKKGMLLNN---AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNI 98 (360)
T ss_dssp GSCCCCTTCEETT---TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred eeeeeecceEecC---EEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCe
Confidence 3444444333344 458889999999999999995 578899999997432 23456888999999996 9999
Q ss_pred cccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC----
Q 011349 113 VNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---- 188 (488)
Q Consensus 113 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---- 188 (488)
+++++++...+..++||||+ +++|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.
T Consensus 99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCC
T ss_pred ecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEcccccc
Confidence 99999999999999999999 899999998655567999999999999999999999999 999999999999975
Q ss_pred ---------------------CCCCeeccCCCcccCCC-CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCC
Q 011349 189 ---------------------DGNPRLSCFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 246 (488)
Q Consensus 189 ---------------------~~~~kl~Dfgla~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~ 246 (488)
++.+||+|||+++.... .....||+.|+|||++.+..++.++|||||||++|||+||+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 256 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCC
Confidence 78999999999986544 34567899999999999999999999999999999999999
Q ss_pred CCCCcchhhhhhcc-------------------ccccccc-cccCCCCC--------------------hhhHHHHHHHH
Q 011349 247 HIPPSHALDLIRGK-------------------NFLMLMD-SCLEGHFS--------------------NDDGTELVRLA 286 (488)
Q Consensus 247 ~p~~~~~~~~~~~~-------------------~~~~~~~-~~~~~~~~--------------------~~~~~~l~~li 286 (488)
.||........... .....+. ......++ ...++.+.+|+
T Consensus 257 ~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 336 (360)
T 3llt_A 257 LLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFL 336 (360)
T ss_dssp CSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHH
Confidence 98865321110000 0000000 00000000 01126788999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||+.||.+|||+.++++|
T Consensus 337 ~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 337 YSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHCCSSGGGSCCHHHHTTS
T ss_pred HHHhcCChhhCCCHHHHhcC
Confidence 99999999999999999876
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=348.20 Aligned_cols=248 Identities=17% Similarity=0.159 Sum_probs=204.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.+++.||+|+||.||+|.. .+|+.||||+++.......+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVS 89 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCC
Confidence 467888999999999999995 4789999999987654455679999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCCC--c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDGK--S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~~--~ 208 (488)
+++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||++ +.++.+||+|||+++...... .
T Consensus 90 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (304)
T 2jam_A 90 GGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST 166 (304)
T ss_dssp SCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHH
T ss_pred CccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcccc
Confidence 9999998863 456999999999999999999999999 9999999999999 788999999999997654432 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..||+.|+|||.+.+..++.++|||||||++|+|++|..||................. ..........+..+.+++.+
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~ 244 (304)
T 2jam_A 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY--EFESPFWDDISESAKDFICH 244 (304)
T ss_dssp HHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC--CCCTTTTTTSCHHHHHHHHH
T ss_pred ccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCccccccCCHHHHHHHHH
Confidence 4589999999999998999999999999999999999998865432221111000000 01122334567889999999
Q ss_pred hccCCCCCCCCHHHHHHHh
Q 011349 289 CLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l 307 (488)
||..||.+|||+.+++++-
T Consensus 245 ~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 245 LLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp HHCSSTTTSCCHHHHHTSH
T ss_pred HcCCChhHCcCHHHHhcCc
Confidence 9999999999999999873
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=353.31 Aligned_cols=252 Identities=18% Similarity=0.192 Sum_probs=208.8
Q ss_pred cCHHHHHHHhcCC-CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--------ChHHHHHHHHHHhhcCCC
Q 011349 41 FNLDQLRAATSGF-CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--------DSRQFLEEARAVGLLRSE 110 (488)
Q Consensus 41 ~~~~~~~~~~~~~-~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~ 110 (488)
++++.+....+.| ..|.+++.||+|+||.||+|. ..+++.||||+++..... ....+.+|+.++++++||
T Consensus 10 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 89 (335)
T 3dls_A 10 VELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89 (335)
T ss_dssp EECCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCT
T ss_pred ccccccccCCcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCC
Confidence 3444444444333 356888999999999999999 457899999999865422 234678899999999999
Q ss_pred CCcccccceecCCeeeEEEecCCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 111 RLVNLIGCCCEGEERLLVAEFMPNE-TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 111 niv~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
||+++++++.+.+..++||||+.+| +|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 90 ~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~ 166 (335)
T 3dls_A 90 NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAED 166 (335)
T ss_dssp TBCCEEEEEECSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTT
T ss_pred CEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCC
Confidence 9999999999999999999998766 9999987 4557999999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC---ccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccc
Q 011349 190 GNPRLSCFGLMKNSRDGK---SYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLML 265 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~---~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 265 (488)
+.+||+|||+++...... ...||+.|+|||++.+..+ +.++|||||||++|+|++|..||..... .
T Consensus 167 ~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------~ 236 (335)
T 3dls_A 167 FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------T 236 (335)
T ss_dssp SCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----------G
T ss_pred CcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----------H
Confidence 999999999998765433 4568999999999988776 7899999999999999999998864311 1
Q ss_pred cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 266 MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.... ...+...++++.+|+.+||+.||.+|||+.+++++-
T Consensus 237 ~~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 237 VEAA--IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp TTTC--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred Hhhc--cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 1111 112233567899999999999999999999999983
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=353.60 Aligned_cols=253 Identities=17% Similarity=0.228 Sum_probs=199.3
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc--CCCCCcccccceecC----CeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL--RSERLVNLIGCCCEG----EERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~----~~~~lv 128 (488)
.+.+++.||+|+||.||+|... ++.||||++... ....+.+|.+++..+ +||||+++++++... ...++|
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred ceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 4588899999999999999874 889999998643 234566666666655 899999999999876 679999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccccCCceeecCCCCCeeccCCCc
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK--------GRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
|||+++|+|.+++.. ..+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 114 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 114 TDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCCc
Confidence 999999999999953 4699999999999999999999998 8 999999999999999999999999999
Q ss_pred ccCCCCC--------ccccccCCCCccccccCCcccC------CceEeehHHHHHHhhC----------CCCCCcchhhh
Q 011349 201 KNSRDGK--------SYSTNLAFTPPEYLRTGRVIPE------SVVYSFGTLLLDLLSG----------KHIPPSHALDL 256 (488)
Q Consensus 201 ~~~~~~~--------~~~~t~~y~aPE~~~~~~~~~~------sDv~slG~il~el~tg----------~~p~~~~~~~~ 256 (488)
+...... ...||+.|+|||++.+...+.. +|||||||++|||+|| ..|+.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 7654322 3468999999999987666655 9999999999999999 44443221100
Q ss_pred hhcccccc-ccccccCCCCC-----hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 257 IRGKNFLM-LMDSCLEGHFS-----NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 257 ~~~~~~~~-~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
........ ..........+ ..++.++.+|+.+||+.||.+|||+.+++++|+.+.....
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 00000000 00111122222 2577889999999999999999999999999999887643
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=368.17 Aligned_cols=249 Identities=18% Similarity=0.223 Sum_probs=184.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecC-----Cee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 125 (488)
+.|.+++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.+|+.++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 4578999999999999999994 47899999999754322 245789999999999999999999998543 568
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
|+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++....
T Consensus 133 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEeccc-cchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99999984 79999986 4567999999999999999999999999 99999999999999999999999999986532
Q ss_pred C-------------------------------CccccccCCCCcccc-ccCCcccCCceEeehHHHHHHhh---------
Q 011349 206 G-------------------------------KSYSTNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLS--------- 244 (488)
Q Consensus 206 ~-------------------------------~~~~~t~~y~aPE~~-~~~~~~~~sDv~slG~il~el~t--------- 244 (488)
. ....||+.|+|||++ .+..++.++|||||||++|||+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 1 234679999999986 45679999999999999999999
Q ss_pred --CCCCCCcchhhhhh---------------------------cc------------c---cccccccccC---CCCChh
Q 011349 245 --GKHIPPSHALDLIR---------------------------GK------------N---FLMLMDSCLE---GHFSND 277 (488)
Q Consensus 245 --g~~p~~~~~~~~~~---------------------------~~------------~---~~~~~~~~~~---~~~~~~ 277 (488)
|+++|++...-... +. . ....+..... ......
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 55555443210000 00 0 0000000000 001123
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.++++.+|+.+||..||.+|||+.++++|
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 46789999999999999999999999998
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-45 Score=345.19 Aligned_cols=242 Identities=18% Similarity=0.208 Sum_probs=204.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.+.+.||+|+||.||+|.. .++..||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT 89 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccC
Confidence 467888999999999999995 4577899999987665667889999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCC---C
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG---K 207 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~---~ 207 (488)
+++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||++ +.++.+||+|||++...... .
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (277)
T 3f3z_A 90 GGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166 (277)
T ss_dssp SCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence 9999998863 456999999999999999999999999 9999999999999 78899999999999865443 3
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCCh----hhHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN----DDGTELV 283 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~ 283 (488)
...+|+.|+|||.+.+ .++.++||||||+++|+|+||..||............ .... ...+. ..++.+.
T Consensus 167 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~ 239 (277)
T 3f3z_A 167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI----REGT--FTFPEKDWLNVSPQAE 239 (277)
T ss_dssp CCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHCC--CCCCHHHHTTSCHHHH
T ss_pred ccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH----HhCC--CCCCchhhhcCCHHHH
Confidence 4568999999999875 4899999999999999999999988654322211110 0000 01111 3467899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||+.||.+|||+.++++|
T Consensus 240 ~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 240 SLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999986
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=378.90 Aligned_cols=246 Identities=20% Similarity=0.268 Sum_probs=204.8
Q ss_pred cCCCCCCceEEEEEeC---CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
+||+|+||.||+|.+. ++..||||+++.... ...+.+.+|+.+|++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6899999999999853 466799999986542 346789999999999999999999999875 56999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-------cc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-------SY 209 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~~ 209 (488)
|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 9999964 3456999999999999999999999999 9999999999999999999999999998764322 12
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.+|+.|+|||++.+..++.++|||||||++|||+| |+.||....... ....+....+...+..+++++.+|+.+
T Consensus 500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----~~~~i~~~~~~~~p~~~~~~l~~li~~ 574 (613)
T 2ozo_A 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----VMAFIEQGKRMECPPECPPELYALMSD 574 (613)
T ss_dssp --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-----HHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 34578999999998999999999999999999998 998886542221 111222222334566678999999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhccc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
||+.||++||++.++++.|+.+....
T Consensus 575 cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 575 CWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp TTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999999876654
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-45 Score=354.56 Aligned_cols=257 Identities=19% Similarity=0.307 Sum_probs=210.8
Q ss_pred cccccccCCCCCCceEEEEEe-----CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC--eeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-----DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE--ERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 127 (488)
.+.+++.||+|+||.||+|.+ .+++.||||++........+.+.+|+.++++++||||+++++++...+ ..++
T Consensus 42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 121 (326)
T 2w1i_A 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 121 (326)
T ss_dssp GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEE
T ss_pred HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEE
Confidence 467889999999999999984 368899999998765455678999999999999999999999887644 7899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 122 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 122 IMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp EECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred EEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 9999999999999975 3356999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh---cc--------ccccccccc
Q 011349 208 -------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR---GK--------NFLMLMDSC 269 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~---~~--------~~~~~~~~~ 269 (488)
...++..|+|||.+.+..++.++|||||||++|||+||..|+......... .. .+...+...
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC
Confidence 234567899999999888999999999999999999999776533111110 00 111122222
Q ss_pred cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 270 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.....+..++.++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 280 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 280 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 22334556778999999999999999999999999999988764
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=366.98 Aligned_cols=252 Identities=19% Similarity=0.135 Sum_probs=203.8
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
..+.+.+++.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|..++..++||||+++++++.+.+..|+
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 345568889999999999999995 5799999999964321 123458899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||++||+|.+++... +..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++++||+|||+++......
T Consensus 139 VmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~ 216 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216 (412)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccCCC
Confidence 99999999999999642 346999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -----ccccccCCCCccccc-------cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 208 -----SYSTNLAFTPPEYLR-------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 208 -----~~~~t~~y~aPE~~~-------~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
...||+.|+|||++. +..++.++|||||||++|||++|+.||............... ......+..+
T Consensus 217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~ 295 (412)
T 2vd5_A 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHY-KEHLSLPLVD 295 (412)
T ss_dssp CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH-HHHCCCC---
T ss_pred ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhc-ccCcCCCccc
Confidence 357899999999997 356899999999999999999999998765332211111100 0000111122
Q ss_pred hhhHHHHHHHHHHhccCCCCCC---CCHHHHHHHh
Q 011349 276 NDDGTELVRLASRCLQYEPRER---PNAKSLVASL 307 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~R---ps~~~il~~l 307 (488)
...++++.+||.+||. +|.+| |+++++++|-
T Consensus 296 ~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hp 329 (412)
T 2vd5_A 296 EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHP 329 (412)
T ss_dssp -CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSG
T ss_pred cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCC
Confidence 3467889999999999 99998 6999999883
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-45 Score=346.10 Aligned_cols=251 Identities=23% Similarity=0.292 Sum_probs=204.4
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+.+.+.+.||+|+||.||+|.+.. +..||||++..... ...+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 90 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWII 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEE
Confidence 456788899999999999998432 33599999986532 235679999999999999999999998764 567999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 91 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 91 MELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp EECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred EecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 999999999999964 3456999999999999999999999999 9999999999999999999999999998654432
Q ss_pred ----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
...+|+.|+|||.+.+..++.++||||||+++|||+| |+.||........ ...+........+...++.+
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l 243 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV-----IGVLEKGDRLPKPDLCPPVL 243 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH-----HHHHHHTCCCCCCTTCCHHH
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH-----HHHHhcCCCCCCCCCCCHHH
Confidence 3355788999999998899999999999999999998 9988754322111 11111111223344567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+++.+||..||.+|||+.+++++|+.+..
T Consensus 244 ~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 244 YTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999998765
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=344.72 Aligned_cols=249 Identities=18% Similarity=0.201 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
..|.+++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 4678899999999999999995 46899999999754422 23578899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC---CeeccCCCcccCCCCC
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNSRDGK 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~~~~~ 207 (488)
|+++++|.+.+.. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++. +||+|||++.......
T Consensus 86 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (284)
T 3kk8_A 86 LVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162 (284)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred cCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence 9999999988863 456999999999999999999999999 999999999999976655 9999999997665433
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
...||+.|+|||.+.+..++.++||||||+++|+|++|+.||.................. .........++++.+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (284)
T 3kk8_A 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKS 240 (284)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHH
T ss_pred cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--CCchhhcccCHHHHH
Confidence 357899999999999999999999999999999999999998664332221111111100 111112345678999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+||+.||++|||+.+++++-
T Consensus 241 li~~~l~~dp~~Rps~~~~l~h~ 263 (284)
T 3kk8_A 241 LIDSMLTVNPKKRITADQALKVP 263 (284)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTSH
T ss_pred HHHHHcccChhhCCCHHHHhcCc
Confidence 99999999999999999999973
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=344.26 Aligned_cols=248 Identities=17% Similarity=0.176 Sum_probs=188.2
Q ss_pred cCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+..+.+++.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY 87 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence 4456778999999999999999995 579999999986432 123467899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999864 3467999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 ----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||......... ...... ....+...+.++
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~ 239 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL----NKVVLA--DYEMPSFLSIEA 239 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSS--CCCCCTTSCHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH----HHHhhc--ccCCccccCHHH
Confidence 2456899999999999888999999999999999999999887653211111 111110 112344567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+++.+||+.||++|||+.+++++
T Consensus 240 ~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 240 KDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHcccCHhhCCCHHHHhcC
Confidence 999999999999999999999986
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-45 Score=351.75 Aligned_cols=247 Identities=18% Similarity=0.166 Sum_probs=197.8
Q ss_pred ccccc-ccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIV-SEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.++ +.||+|+||.||+|. ..+++.||||++..........+.+|+.++.++ +||||+++++++.+.+..++||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 35564 578999999999999 457999999999876655677899999999995 799999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC---CeeccCCCcccCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~~~~-- 206 (488)
++|++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||++......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999999999974 456999999999999999999999999 999999999999987776 899999998754321
Q ss_pred ---------CccccccCCCCcccccc-----CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-----------ccc
Q 011349 207 ---------KSYSTNLAFTPPEYLRT-----GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR-----------GKN 261 (488)
Q Consensus 207 ---------~~~~~t~~y~aPE~~~~-----~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~-----------~~~ 261 (488)
....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||......... ...
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 13358999999999975 55889999999999999999999988654211000 000
Q ss_pred cccccccccCCCCC----hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 FLMLMDSCLEGHFS----NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 ~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+... ...++ ...+..+.+|+.+||+.||.+|||+.++++|
T Consensus 250 ~~~i~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 250 FESIQEG--KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHC--CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhcc--CcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000000 01122 1246789999999999999999999999997
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=349.19 Aligned_cols=255 Identities=19% Similarity=0.237 Sum_probs=199.4
Q ss_pred CcccccccCCCCCCceEEEEEeC----CCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCC----
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD----EDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGE---- 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 123 (488)
+.+.+.+.||+|+||.||+|... ++..||||+++...... .+.+.+|+.++++++||||+++++++....
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 45678888999999999999843 34579999997654322 356899999999999999999999997754
Q ss_pred -eeeEEEecCCCCChhhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCC
Q 011349 124 -ERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198 (488)
Q Consensus 124 -~~~lv~e~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 198 (488)
..++||||+++++|.+++.. .....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecC
Confidence 35999999999999998842 13467999999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccC
Q 011349 199 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 199 la~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
+++..... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..|+......... ..+.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-----~~~~~~~~ 267 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY-----DYLLHGHR 267 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-----HHHHTTCC
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH-----HHHHcCCC
Confidence 99865432 23355788999999999999999999999999999999 77776543222111 11111112
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...+...++.+.+++.+||..||.+|||+.+++++|+.+....
T Consensus 268 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 268 LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 2344556788999999999999999999999999999987653
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-45 Score=346.91 Aligned_cols=243 Identities=16% Similarity=0.181 Sum_probs=203.5
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC--ChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP--DSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|... +++.||||+++..... ....+.+|+..+..+ +||||+++++++.+.+..++|||
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e 91 (289)
T 1x8b_A 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 91 (289)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEE
Confidence 4578889999999999999954 7999999999865432 345788999999999 89999999999999999999999
Q ss_pred cCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-------------------
Q 011349 131 FMPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD------------------- 189 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~------------------- 189 (488)
|++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 92 YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp CCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------C
T ss_pred ecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 999999999996421 266999999999999999999999999 9999999999999844
Q ss_pred CCCeeccCCCcccCCCCCccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc
Q 011349 190 GNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS 268 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 268 (488)
..+||+|||++..........+|+.|+|||.+.+. .+++++|||||||++|+|++|.+++....... .+. .
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-------~~~-~ 242 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH-------EIR-Q 242 (289)
T ss_dssp CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH-------HHH-T
T ss_pred eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH-------HHH-c
Confidence 47899999999988777777899999999999875 66789999999999999999987654331110 011 1
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
......+...++.+.+++.+||+.||++|||+.++++|
T Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 243 GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 11123344567889999999999999999999999987
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-45 Score=356.73 Aligned_cols=246 Identities=19% Similarity=0.249 Sum_probs=199.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.+++.||+|+||.||+|.. .+++.||||++.... ....+|++++.++ +||||+++++++.+++..++||||+
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~ 98 (342)
T 2qr7_A 23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM 98 (342)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCC
Confidence 468889999999999999995 468899999997654 2345788999888 7999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC----CCCeeccCCCcccCCCC--
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD----GNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfgla~~~~~~-- 206 (488)
+||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||+.++ +.+||+|||+++.....
T Consensus 99 ~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 99 KGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp CSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 9999999987 4567999999999999999999999999 9999999999998433 35999999999865432
Q ss_pred --CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc--ccCCCCChhhHHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS--CLEGHFSNDDGTEL 282 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l 282 (488)
....+|+.|+|||++.+..++.++|||||||++|||++|..||........ ......+... ..........+.++
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~ 254 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP-EEILARIGSGKFSLSGGYWNSVSDTA 254 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH-HHHHHHHHHCCCCCCSTTTTTSCHHH
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH-HHHHHHHccCCcccCccccccCCHHH
Confidence 245789999999999888899999999999999999999998864211100 0000000000 11112234567889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+|+.+||..||++|||+.++++|-.
T Consensus 255 ~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 255 KDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred HHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 99999999999999999999998743
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-45 Score=354.30 Aligned_cols=240 Identities=20% Similarity=0.254 Sum_probs=181.0
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCCCCCh
Q 011349 60 SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
+.||+|+||.||+|.. .+++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||++||+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 6789999999999995 46899999999643 3567889999999997 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeeccCCCcccCCCC----Cccc
Q 011349 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSCFGLMKNSRDG----KSYS 210 (488)
Q Consensus 138 ~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla~~~~~~----~~~~ 210 (488)
.+++.. ...+++.++..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 94 ~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 999973 467999999999999999999999999 99999999999997665 7999999999865433 2456
Q ss_pred cccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC--CC----hhhHHHHHH
Q 011349 211 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH--FS----NDDGTELVR 284 (488)
Q Consensus 211 ~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~l~~ 284 (488)
+|+.|+|||++.+..++.++|||||||++|+|++|..||........ ............... ++ ...++++.+
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 249 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHHcCCCCCCcccccCCCHHHHH
Confidence 79999999999999999999999999999999999998865422110 000111111111111 11 235688999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
|+.+||..||.+|||+.++++|
T Consensus 250 li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 250 LIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHHCCCChhHCCCHHHHhcC
Confidence 9999999999999999999876
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=346.20 Aligned_cols=246 Identities=20% Similarity=0.245 Sum_probs=204.5
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+..|.+++.||+|+||.||+|.. .++..||||++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 34678889999999999999995 457789999986432 12245789999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 999999999999873 356999999999999999999999999 999999999999999999999999998655432
Q ss_pred CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..||............. .....++...+..+.+|+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li 238 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS------RVEFTFPDFVTEGARDLI 238 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH------HTCCCCCTTSCHHHHHHH
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH------hCCCCCCCcCCHHHHHHH
Confidence 34578999999999999899999999999999999999999886543222111100 011233445678899999
Q ss_pred HHhccCCCCCCCCHHHHHHHh
Q 011349 287 SRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l 307 (488)
.+||+.||.+|||+.++++|-
T Consensus 239 ~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 239 SRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp HHHCCSSGGGSCCHHHHHHCH
T ss_pred HHHhccChhhCCCHHHHhhCc
Confidence 999999999999999999984
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=352.87 Aligned_cols=257 Identities=21% Similarity=0.279 Sum_probs=208.8
Q ss_pred CCcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC-
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE- 123 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~- 123 (488)
.+.+.+++.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 34668899999999999999983 34678999999765432 235789999999999 7999999999987654
Q ss_pred eeeEEEecCCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWEN--------------QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
..++||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+||+++.+
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEK 184 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGG
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCC
Confidence 58999999999999999974321 12899999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 262 (488)
+.+||+|||+++...... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..|+........ .
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~----~ 260 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----F 260 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH----H
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH----H
Confidence 999999999998654332 3456789999999999999999999999999999998 8887754321111 1
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...+........+...++.+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 261 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 261 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1111111122334456788999999999999999999999999999887643
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-45 Score=347.69 Aligned_cols=251 Identities=22% Similarity=0.269 Sum_probs=205.9
Q ss_pred Ccccccc-cCCCCCCceEEEEEe---CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 54 CADNIVS-EHGEKAPNVVYKGLV---DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 54 ~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
..+.+.+ .||+|+||.||+|.+ .+++.||||+++...... .+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 3456676 899999999999963 346889999997654222 46799999999999999999999998 5677899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 9999999999999974 456999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 208 -------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 208 -------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
...+|+.|+|||.+.+..++.++||||||+++|+|+| |..||........ ...+........+..++
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 246 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-----TAMLEKGERMGCPAGCP 246 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----HHHHHTTCCCCCCTTCC
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCC
Confidence 2234688999999998889999999999999999999 9888765432221 11111122233455677
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999988654
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-45 Score=353.05 Aligned_cols=252 Identities=20% Similarity=0.313 Sum_probs=207.0
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.+.+.||+|+||.||+|... +++.||||++...... ....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 105 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEE
Confidence 4578889999999999999853 4778999999754422 23468999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 128 VAEFMPNETLSKHLFHWE--------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~ 184 (322)
T 1p4o_A 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGM 184 (322)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred EEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcc
Confidence 999999999999986421 246799999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCC
Q 011349 200 MKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 200 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
++...... ...+|+.|+|||.+.+..++.++|||||||++|||+| |..|+.......... .+......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~ 259 (322)
T 1p4o_A 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR-----FVMEGGLL 259 (322)
T ss_dssp CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHH-----HHHTTCCC
T ss_pred ccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHH-----HHHcCCcC
Confidence 97653321 2345788999999998899999999999999999999 777765432221111 11111112
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
..+..++..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 260 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 2344567889999999999999999999999999988755
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=372.31 Aligned_cols=251 Identities=16% Similarity=0.206 Sum_probs=207.5
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+++.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+|++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 45667888899999999999995 469999999996432 23356789999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 129 AEFMPNETLSKHLFHWE--NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
|||++||+|.+++.... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|++||+|||+++.....
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~ 342 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence 99999999999986432 456999999999999999999999999 999999999999999999999999999876443
Q ss_pred ----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 ----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
....||+.|+|||++.+..++.++|||||||++|||+||..||...............+... ...++...++.+
T Consensus 343 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~ 420 (543)
T 3c4z_A 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPAS 420 (543)
T ss_dssp CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHHH
T ss_pred CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHHH
Confidence 23578999999999999999999999999999999999999986542110000001111111 123455667899
Q ss_pred HHHHHHhccCCCCCCCCH-----HHHHHH
Q 011349 283 VRLASRCLQYEPRERPNA-----KSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~-----~~il~~ 306 (488)
.+|+.+||..||.+||++ .++++|
T Consensus 421 ~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 421 KDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp HHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred HHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 999999999999999965 778776
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=348.68 Aligned_cols=250 Identities=20% Similarity=0.226 Sum_probs=199.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
..|.+++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 4578899999999999999995 458999999987654322 3568899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|+++++|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (311)
T 4agu_A 83 YCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY 159 (311)
T ss_dssp CCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred eCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence 999999998876 4566999999999999999999999999 999999999999999999999999999865532
Q ss_pred CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc---c-------------cccccc
Q 011349 207 KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF---L-------------MLMDSC 269 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~---~-------------~~~~~~ 269 (488)
....+|+.|+|||.+.+ ..++.++|||||||++|+|+||..||............. . ......
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (311)
T 4agu_A 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239 (311)
T ss_dssp ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence 24467899999999976 668999999999999999999999886543221100000 0 000000
Q ss_pred -cC--CCC------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 270 -LE--GHF------SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 270 -~~--~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ... ....+..+.+|+.+||+.||.+|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 000 02346779999999999999999999999987
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-45 Score=362.11 Aligned_cols=248 Identities=21% Similarity=0.288 Sum_probs=189.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcC-CCCCcccccceecCC--eeeE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLR-SERLVNLIGCCCEGE--ERLL 127 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~~~l 127 (488)
..|.+++.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.++..+. ||||+++++++...+ ..|+
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 3568899999999999999994 5789999999865422 22456889999999997 999999999997543 6899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC--
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 205 (488)
||||++ ++|..++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 89 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 999997 689998853 56999999999999999999999999 99999999999999999999999999975432
Q ss_pred -----------------------CCccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc
Q 011349 206 -----------------------GKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261 (488)
Q Consensus 206 -----------------------~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~ 261 (488)
.....||+.|+|||++.+ ..++.++|||||||++|||++|++||++..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i 243 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 123468999999999987 67899999999999999999999998764321110000
Q ss_pred cccc-------c----------------------ccccCC------------CCChhhHHHHHHHHHHhccCCCCCCCCH
Q 011349 262 FLML-------M----------------------DSCLEG------------HFSNDDGTELVRLASRCLQYEPRERPNA 300 (488)
Q Consensus 262 ~~~~-------~----------------------~~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~ 300 (488)
...+ + ...... ......++++.+|+.+||..||.+|||+
T Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~ 323 (388)
T 3oz6_A 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323 (388)
T ss_dssp HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence 0000 0 000000 0011345789999999999999999999
Q ss_pred HHHHHH
Q 011349 301 KSLVAS 306 (488)
Q Consensus 301 ~~il~~ 306 (488)
.++++|
T Consensus 324 ~e~l~H 329 (388)
T 3oz6_A 324 NDALKH 329 (388)
T ss_dssp HHHTTS
T ss_pred HHHhCC
Confidence 999998
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-45 Score=354.60 Aligned_cols=258 Identities=21% Similarity=0.265 Sum_probs=198.6
Q ss_pred cCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHH--HhhcCCCCCccccccee-----cCC
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARA--VGLLRSERLVNLIGCCC-----EGE 123 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~-----~~~ 123 (488)
-+++.+.+++.||+|+||.||+|.. +++.||||++.... ...+..|.++ +..++||||+++++.+. ...
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 3456788999999999999999977 78899999997433 3445555555 45589999999997543 234
Q ss_pred eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CCcccccccCCceeecCCCCCee
Q 011349 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK---------GRALYHDLNTYRILFDQDGNPRL 194 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------~~iiH~Dlkp~Nill~~~~~~kl 194 (488)
..++||||+++|+|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEE
T ss_pred eEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEE
Confidence 67899999999999999953 4468999999999999999999999 8 999999999999999999999
Q ss_pred ccCCCcccCCCC------------CccccccCCCCcccccc-------CCcccCCceEeehHHHHHHhhCCCCCCcchh-
Q 011349 195 SCFGLMKNSRDG------------KSYSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLSGKHIPPSHAL- 254 (488)
Q Consensus 195 ~Dfgla~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~il~el~tg~~p~~~~~~- 254 (488)
+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||+||..|+.....
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 999999765321 13468999999999986 4567899999999999999999766533211
Q ss_pred hhhhc--------cc----ccc-ccccccCCCC------ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 255 DLIRG--------KN----FLM-LMDSCLEGHF------SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 255 ~~~~~--------~~----~~~-~~~~~~~~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..... .. ... .........+ ....++.+.+|+.+||+.||++|||+.++++.|+.+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 00000 00 000 0001111111 22367789999999999999999999999999999887654
Q ss_pred C
Q 011349 316 V 316 (488)
Q Consensus 316 ~ 316 (488)
.
T Consensus 322 ~ 322 (336)
T 3g2f_A 322 R 322 (336)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-45 Score=358.69 Aligned_cols=257 Identities=15% Similarity=0.127 Sum_probs=205.1
Q ss_pred CcccccccCCCCCCceEEEEEeCC---------CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcc----------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE---------DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVN---------- 114 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 114 (488)
..|.+++.||+|+||.||+|.... ++.||||++... +.+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 467888999999999999999653 788999998754 46889999999999999988
Q ss_pred -----cccceec-CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC
Q 011349 115 -----LIGCCCE-GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188 (488)
Q Consensus 115 -----~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~ 188 (488)
+++++.. +...++||||+ +++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcC
Confidence 4555554 67889999999 999999997543467999999999999999999999999 999999999999999
Q ss_pred CC--CCeeccCCCcccCCCC-----------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhh
Q 011349 189 DG--NPRLSCFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD 255 (488)
Q Consensus 189 ~~--~~kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~ 255 (488)
++ .+||+|||+++..... ....||+.|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 8999999999765321 2347899999999999989999999999999999999999988654211
Q ss_pred h--hhcc--ccccccccccCC-CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCCC
Q 011349 256 L--IRGK--NFLMLMDSCLEG-HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317 (488)
Q Consensus 256 ~--~~~~--~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~ 317 (488)
. .... .+.......... ......+.++.+++.+||..||.+|||+.++++.|+.+.......
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 1 0000 000000000000 001134688999999999999999999999999999998776543
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-45 Score=356.20 Aligned_cols=246 Identities=20% Similarity=0.161 Sum_probs=197.4
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCC-----CCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRS-----AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
|.+++.||+|+||.||+|.. .++..||||++... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 107 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVM 107 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEE
Confidence 47888999999999999995 56889999998643 2234568999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 011349 130 EFMPNETLSKHLFHW--------------------------------------ENQPMKWAMRVRVALYLAQALDYCSSK 171 (488)
Q Consensus 130 e~~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~ 171 (488)
||++||+|.+++... ....+++..++.++.||+.||.|||+.
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 187 (345)
T 3hko_A 108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ 187 (345)
T ss_dssp ECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999988521 012346778899999999999999999
Q ss_pred CCcccccccCCceeecCCC--CCeeccCCCcccCCC--------CCccccccCCCCcccccc--CCcccCCceEeehHHH
Q 011349 172 GRALYHDLNTYRILFDQDG--NPRLSCFGLMKNSRD--------GKSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLL 239 (488)
Q Consensus 172 ~~iiH~Dlkp~Nill~~~~--~~kl~Dfgla~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il 239 (488)
+ |+||||||+|||++.++ .+||+|||+++.... .....||+.|+|||.+.+ ..++.++|||||||++
T Consensus 188 ~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 266 (345)
T 3hko_A 188 G-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266 (345)
T ss_dssp T-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH
T ss_pred C-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH
Confidence 9 99999999999998766 899999999975422 124568999999999975 6789999999999999
Q ss_pred HHHhhCCCCCCcchhhhhhccccccccccccC--CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE--GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 240 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
|||++|+.||.......... .+...... .......++.+.+|+.+||+.||.+|||+.+++++
T Consensus 267 ~el~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 267 HLLLMGAVPFPGVNDADTIS----QVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHSSCSSCCSSHHHHHH----HHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHCCCCCCCCChHHHHH----HHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 99999999886543222111 11111111 11112356889999999999999999999999987
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=360.21 Aligned_cols=244 Identities=16% Similarity=0.177 Sum_probs=191.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--------CChHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--------PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
.|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+|++++||||+++++++. .+..
T Consensus 136 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~ 214 (419)
T 3i6u_A 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDY 214 (419)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEE
T ss_pred cEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCce
Confidence 467888999999999999994 5689999999875321 11235889999999999999999999875 5568
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeeccCCCccc
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKN 202 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~ 202 (488)
++||||+++|+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+|||+++.
T Consensus 215 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~ 291 (419)
T 3i6u_A 215 YIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291 (419)
T ss_dssp EEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred EEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeeccccee
Confidence 99999999999999886 4567999999999999999999999999 9999999999999654 4599999999987
Q ss_pred CCCC---CccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC--
Q 011349 203 SRDG---KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF-- 274 (488)
Q Consensus 203 ~~~~---~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 274 (488)
.... ....||+.|+|||++.+ ..++.++|||||||++|+|+||..||....... .....+........
T Consensus 292 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~----~~~~~i~~~~~~~~~~ 367 (419)
T 3i6u_A 292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQITSGKYNFIPE 367 (419)
T ss_dssp CC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC----CHHHHHHTTCCCCCHH
T ss_pred cCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH----HHHHHHhcCCCCCCch
Confidence 6543 34578999999999864 668889999999999999999999886532110 00011111000000
Q ss_pred -ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 -SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 -~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+..+.+|+.+||+.||.+|||+.++++|
T Consensus 368 ~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 368 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 11346789999999999999999999999987
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=342.05 Aligned_cols=246 Identities=16% Similarity=0.159 Sum_probs=198.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
|.+.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|++++++++||||+++++++.+....++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 103 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCE 103 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCC
Confidence 57788999999999999995 568899999987654 2345789999999999999999999999999999999999999
Q ss_pred CCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCC--
Q 011349 134 NETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 134 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~-- 206 (488)
+|+|.+.+... ....+++..++.++.||+.||.|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 104 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (285)
T 3is5_A 104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH 182 (285)
T ss_dssp CCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred CCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc
Confidence 99999988532 3467999999999999999999999999 9999999999999 45688999999999765432
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....+|+.|+|||.+. +.++.++|||||||++|||++|+.||................ ... .......++++.++
T Consensus 183 ~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~l 258 (285)
T 3is5_A 183 STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE--PNY-AVECRPLTPQAVDL 258 (285)
T ss_dssp ----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC--CCC-CC--CCCCHHHHHH
T ss_pred CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCC--ccc-ccccCcCCHHHHHH
Confidence 3456899999999986 568899999999999999999999987653332211111000 000 01111245789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||.+|||+.+++++
T Consensus 259 i~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 259 LKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp HHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHccCChhhCcCHHHHhcC
Confidence 999999999999999999976
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-44 Score=363.92 Aligned_cols=248 Identities=16% Similarity=0.195 Sum_probs=192.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecC------Ce
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 124 (488)
..|.+++.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+.+|+.++||||+++++++... ..
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 457889999999999999999 4568999999997542 12245788999999999999999999998654 35
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.|+||||+++ +|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 142 ~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 142 VYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 7999999975 5666663 24999999999999999999999999 9999999999999999999999999998765
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-------------------
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF------------------- 262 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~------------------- 262 (488)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+...........
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 43 34678999999999999999999999999999999999999987642211000000
Q ss_pred --------------ccccccccCCCC---ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 263 --------------LMLMDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 263 --------------~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
............ ....++++.+|+.+||..||++|||+.++++|-
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 000000000000 011267899999999999999999999999983
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=346.30 Aligned_cols=244 Identities=16% Similarity=0.260 Sum_probs=206.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.+++.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++......++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 103 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 103 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence 57888999999999999994 5689999999976543 345789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
+++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ...
T Consensus 104 ~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 179 (303)
T 3a7i_A 104 GGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 179 (303)
T ss_dssp TEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCC
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCcc
Confidence 999999984 467999999999999999999999999 999999999999999999999999999765432 345
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.+|+.|+|||.+.+..++.++||||||+++|+|++|..|+......... ..+........+...+..+.+++.+|
T Consensus 180 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~~ 254 (303)
T 3a7i_A 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-----FLIPKNNPPTLEGNYSKPLKEFVEAC 254 (303)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCCCSSCCHHHHHHHHHH
T ss_pred CCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH-----HHhhcCCCCCCccccCHHHHHHHHHH
Confidence 6899999999999989999999999999999999999887643221111 01111112233445567899999999
Q ss_pred ccCCCCCCCCHHHHHHHhc
Q 011349 290 LQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~l~ 308 (488)
|..||.+|||+.+++++..
T Consensus 255 l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 255 LNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp CCSSGGGSCCHHHHTTCHH
T ss_pred cCCChhhCcCHHHHhhChh
Confidence 9999999999999998754
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-44 Score=353.66 Aligned_cols=248 Identities=17% Similarity=0.230 Sum_probs=195.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCC------e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGE------E 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 124 (488)
..|.+++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 3568889999999999999995 57999999999654322 2356889999999999999999999987653 4
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.|+||||+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 69999999 7999999863 56999999999999999999999999 9999999999999999999999999998765
Q ss_pred CC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc--------------------
Q 011349 205 DG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------------------- 262 (488)
Q Consensus 205 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-------------------- 262 (488)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+...........
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 43 35678999999999987 679999999999999999999999987542211000000
Q ss_pred --ccccccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 --LMLMDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 --~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+..... .......++.+.+|+.+||..||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000000 01223456789999999999999999999999997
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=352.51 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=200.4
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+..|.+++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.++++++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 345788999999999999999995 458999999987654322 34578999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+++++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 103 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999999988765 4556999999999999999999999999 999999999999999999999999999765432
Q ss_pred --CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc--------------------cc
Q 011349 207 --KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------------------FL 263 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--------------------~~ 263 (488)
....+|+.|+|||.+.+. .++.++|||||||++|+|++|+.||............ ..
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 345689999999999875 6899999999999999999999988654321110000 00
Q ss_pred cccccccCCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 MLMDSCLEGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+..... .....++.+.+|+.+||+.||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000 112346789999999999999999999999986
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=342.63 Aligned_cols=247 Identities=19% Similarity=0.226 Sum_probs=207.7
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
..+.+.+++.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 3456788999999999999999954 68889999986432 2234679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 92 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 92 MLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999999873 356999999999999999999999999 999999999999999999999999998765432
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||.+.+..++.++||||||+++|+|++|..||.......... .+.. ....++...+..+.++
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~l 242 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR----RIVN--VDLKFPPFLSDGSKDL 242 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHT--TCCCCCTTSCHHHHHH
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHH----HHhc--cccCCCCcCCHHHHHH
Confidence 34578999999999999899999999999999999999999886543221111 1111 1122344567889999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+||..||.+|||+.++++|-
T Consensus 243 i~~~l~~~p~~Rps~~~ll~h~ 264 (284)
T 2vgo_A 243 ISKLLRYHPPQRLPLKGVMEHP 264 (284)
T ss_dssp HHHHSCSSGGGSCCHHHHHTCH
T ss_pred HHHHhhcCHhhCCCHHHHhhCH
Confidence 9999999999999999999873
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-44 Score=338.73 Aligned_cols=246 Identities=19% Similarity=0.158 Sum_probs=203.1
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.+++.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++||||+
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (276)
T 2yex_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (276)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEec
Confidence 4678899999999999999954 689999999875432 33567999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC------C
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------G 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~ 206 (488)
++++|.+++. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++..... .
T Consensus 88 ~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 164 (276)
T 2yex_A 88 SGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (276)
T ss_dssp TTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred CCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence 9999999996 4567999999999999999999999999 99999999999999999999999999875432 2
Q ss_pred CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||........... ...............+..+.++
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l 241 (276)
T 2yex_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---DWKEKKTYLNPWKKIDSAPLAL 241 (276)
T ss_dssp CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHH---HHHTTCTTSTTGGGSCHHHHHH
T ss_pred cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHH---HhhhcccccCchhhcCHHHHHH
Confidence 34568999999999987665 7899999999999999999998865322111000 0011111111123456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||.+|||+.+++++
T Consensus 242 i~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 242 LHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp HHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHCCCCchhCCCHHHHhcC
Confidence 999999999999999999986
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-44 Score=342.37 Aligned_cols=247 Identities=17% Similarity=0.195 Sum_probs=201.6
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+.....||+|+||.||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 34445679999999999994 56889999999876655567899999999999999999999999999999999999999
Q ss_pred CChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCcccCCCC----Cc
Q 011349 135 ETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKNSRDG----KS 208 (488)
Q Consensus 135 gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~----~~ 208 (488)
++|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||+++..... ..
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 99999997532 235779999999999999999999999 999999999999987 899999999999865432 34
Q ss_pred cccccCCCCccccccCC--cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~--~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
..||+.|+|||.+.+.. ++.++||||||+++|+|+||+.||.......... ............+...+.++.+++
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li 259 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM---FKVGMFKVHPEIPESMSAEAKAFI 259 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH---HHHHHHCCCCCCCTTSCHHHHHHH
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH---HhhccccccccccccCCHHHHHHH
Confidence 57899999999997643 7889999999999999999999875432111100 000001122334556678899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||+.||++|||+.+++.+
T Consensus 260 ~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 260 LKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHTTCSSTTTSCCHHHHHTS
T ss_pred HHHccCChhhCCCHHHHhcC
Confidence 99999999999999999986
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=352.16 Aligned_cols=252 Identities=17% Similarity=0.213 Sum_probs=194.8
Q ss_pred cCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
..++.|.+++.||+|+||.||+|. ..+++.||||+++...... .+.+.+|+.++++++||||+++++++.+++..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 345678999999999999999999 4578999999997654222 3467899999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-----CCCCCeeccCCCccc
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-----QDGNPRLSCFGLMKN 202 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-----~~~~~kl~Dfgla~~ 202 (488)
||||++ |+|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 111 v~e~~~-~~L~~~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMD--KNPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEECCS-EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEecCC-CCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 999997 59999987 3456999999999999999999999999 99999999999994 455699999999976
Q ss_pred CCCC----CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc--------------
Q 011349 203 SRDG----KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------------- 263 (488)
Q Consensus 203 ~~~~----~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------------- 263 (488)
.... ....+|+.|+|||++.+. .++.++|||||||++|||++|..||..............
T Consensus 187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 5422 344679999999999874 489999999999999999999998865432111100000
Q ss_pred ------cccccc----cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 ------MLMDSC----LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ------~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... .....+...+.++.+|+.+||+.||.+|||+.++++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000 0000111245789999999999999999999999986
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=353.72 Aligned_cols=248 Identities=13% Similarity=0.170 Sum_probs=199.0
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceec------CCe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCE------GEE 124 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~------~~~ 124 (488)
.+.|.+++.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.+++++ +||||+++++++.. .+.
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 34568889999999999999995 578999999997654 3457899999999999 79999999999976 467
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+++++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 899999999999999997654567999999999999999999999999 9999999999999999999999999988654
Q ss_pred CC----CccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC
Q 011349 205 DG----KSYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275 (488)
Q Consensus 205 ~~----~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (488)
.. ....+|+.|+|||.+. +..++.++|||||||++|+|+||..||.......... ...........+
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~ 256 (326)
T 2x7f_A 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LIPRNPAPRLKS 256 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH----HHHHSCCCCCSC
T ss_pred cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH----HhhcCccccCCc
Confidence 32 3456899999999987 4678899999999999999999998876532211110 011111111123
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...+..+.+++.+||..||.+|||+.++++|
T Consensus 257 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 3456789999999999999999999999986
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-45 Score=352.76 Aligned_cols=251 Identities=19% Similarity=0.244 Sum_probs=196.4
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+++.||+|+||.||+|... +++.||||++....... ...+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46788999999999999999954 78999999997544222 22466899999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
++ |+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~ 158 (324)
T 3mtl_A 82 LD-KDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD 158 (324)
T ss_dssp CS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred cc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccc
Confidence 97 689888865 3456999999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccc-------ccccccccC--------
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-------LMLMDSCLE-------- 271 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~-------~~~~~~~~~-------- 271 (488)
...+|+.|+|||.+.+ ..++.++|||||||++|+|+||+.||.+........... ...+.....
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238 (324)
T ss_dssp ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence 3467999999999876 568999999999999999999999987653221110000 000000000
Q ss_pred -C--------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 272 -G--------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 272 -~--------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
. ......++++.+|+.+||+.||.+|||+.++++|-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 283 (324)
T 3mtl_A 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP 283 (324)
T ss_dssp CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence 0 00123457889999999999999999999999973
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=357.99 Aligned_cols=251 Identities=20% Similarity=0.227 Sum_probs=203.9
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..+.+++.||+|+||.||+|... ++..||+|++...... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 45788899999999999999954 6899999999865322 245789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCC--CCCc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR--DGKS 208 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--~~~~ 208 (488)
++|++|.+++.. ...+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||++.... ....
T Consensus 113 ~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 189 (360)
T 3eqc_A 113 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 189 (360)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence 999999999973 45699999999999999999999996 7 9999999999999999999999999986542 2234
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc---------------------------
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------------------------- 261 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--------------------------- 261 (488)
..||+.|+|||++.+..++.++|||||||++|+|+||+.||............
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 3eqc_A 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269 (360)
T ss_dssp -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence 57899999999999999999999999999999999999988654322110000
Q ss_pred -------ccc----ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 262 -------FLM----LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 262 -------~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
... ..............+.++.+|+.+||+.||++|||+.++++|-
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 000 0000011111223567899999999999999999999999974
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-44 Score=353.02 Aligned_cols=246 Identities=11% Similarity=0.088 Sum_probs=204.0
Q ss_pred CcccccccCCCCCCceEEEEE------eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC---CCCCcccccceecCCe
Q 011349 54 CADNIVSEHGEKAPNVVYKGL------VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR---SERLVNLIGCCCEGEE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~ 124 (488)
..|.+++.||+|+||.||+|. ..+++.||||+++.. ....+.+|+.++..++ |+||+++++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 456788899999999999993 456889999999754 3567888888888886 9999999999999999
Q ss_pred eeEEEecCCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-----------CC
Q 011349 125 RLLVAEFMPNETLSKHLFHW---ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-----------DG 190 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-----------~~ 190 (488)
.++||||++||+|.+++... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++. ++
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CT
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999999642 3467999999999999999999999999 999999999999998 89
Q ss_pred CCeeccCCCcccCC---C---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccc
Q 011349 191 NPRLSCFGLMKNSR---D---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLM 264 (488)
Q Consensus 191 ~~kl~Dfgla~~~~---~---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 264 (488)
.+||+|||+++... . .....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~------ 294 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK------ 294 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE------
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee------
Confidence 99999999996542 1 13456899999999999999999999999999999999999887543221111
Q ss_pred ccccccCCCCChhhHHHHHHHHHHhccCCCCCC-CCHHHHHHHhchhhcc
Q 011349 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRER-PNAKSLVASLTPLQKE 313 (488)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R-ps~~~il~~l~~~~~~ 313 (488)
+...... . ..+..+.+++..|+..+|.+| |++.++.+.|+.+...
T Consensus 295 -~~~~~~~-~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 295 -PEGLFRR-L--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -ECSCCTT-C--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -echhccc-c--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 1111111 1 236778999999999999999 7888888888877665
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=349.99 Aligned_cols=255 Identities=20% Similarity=0.288 Sum_probs=205.8
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+.+++.||+|+||.||+|.+ .++..||||++..... .....+.+|+.++++++||||+++++++......+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 3467889999999999999983 2477899999975432 23457899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCC
Q 011349 127 LVAEFMPNETLSKHLFHWEN-----QPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFG 198 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg 198 (488)
+||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++. +..+||+|||
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECccc
Confidence 99999999999999975322 45899999999999999999999999 999999999999984 4569999999
Q ss_pred CcccCCC------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccC
Q 011349 199 LMKNSRD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 199 la~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
+++.... .....+|+.|+|||.+.+..++.++|||||||++|+|+| |..|+......... ..+.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-----~~~~~~~~ 263 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL-----EFVTSGGR 263 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHTTCC
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHH-----HHHhcCCC
Confidence 9874322 234466889999999998899999999999999999998 87777654222111 11111112
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...+..++..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 264 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 264 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 2334456788999999999999999999999999999887654
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=344.18 Aligned_cols=257 Identities=14% Similarity=0.157 Sum_probs=206.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccce-ecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC-CEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~ 131 (488)
+.|.+++.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++.++|++++..+..+ ......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 3568889999999999999994 679999999987654 335789999999999988877666555 556778999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~-- 206 (488)
+ +++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 9 8999999964 3457999999999999999999999999 9999999999999 48899999999999765432
Q ss_pred ---------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC---CC
Q 011349 207 ---------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG---HF 274 (488)
Q Consensus 207 ---------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~ 274 (488)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||....... .......+....... ..
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 242 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT-KRQKYERISEKKMSTPIEVL 242 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS-SSSHHHHHHHHHHHSCHHHH
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh-hhhhhhhhcccccCCchHHH
Confidence 34568999999999999899999999999999999999999886531100 000000000000000 11
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCC
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 316 (488)
....++++.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 243 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 233467899999999999999999999999999998877543
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=341.53 Aligned_cols=246 Identities=17% Similarity=0.180 Sum_probs=200.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC----CCChHHHHHHHHHHhhcCCCCCccccccee--cCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA----WPDSRQFLEEARAVGLLRSERLVNLIGCCC--EGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~ 126 (488)
+.|.+++.||+|+||.||+|.. .+++.||||+++... ......+.+|+.++++++||||+++++++. +....+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 5678899999999999999995 568899999997532 233567999999999999999999999984 456789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||++++ |.+++.......+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 999999865 777776655678999999999999999999999999 999999999999999999999999999865432
Q ss_pred ------CccccccCCCCccccccCC--cccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 207 ------KSYSTNLAFTPPEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~~~--~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
....+|+.|+|||++.+.. .+.++||||||+++|||++|..||........... +... ....+..+
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----i~~~--~~~~~~~~ 236 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN----IGKG--SYAIPGDC 236 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHC--CCCCCSSS
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH----HhcC--CCCCCCcc
Confidence 2346799999999997643 47799999999999999999998875432211110 0000 11234456
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+.+++.+||..||.+|||+.+++++-
T Consensus 237 ~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 237 GPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 78899999999999999999999999873
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-44 Score=379.07 Aligned_cols=246 Identities=20% Similarity=0.263 Sum_probs=208.4
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCC---CCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRS---AWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
..+.+.+++.||+|+||.||+|.. .+++.||||+++.. .....+.+..|..++..+ +||||+++++++.+.+.+|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 355778999999999999999994 46889999998743 123456788999999988 7999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC-
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD- 205 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 205 (488)
|||||++||+|.+++.. .+.+++..+..++.||+.||.|||+.+ ||||||||+|||++.++++||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999999973 356999999999999999999999999 99999999999999999999999999985332
Q ss_pred ---CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 206 ---GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 206 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
.....||+.|+|||++.+..++.++|||||||++|||++|..||........... +... ...++...++++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~ 569 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IMEH--NVAYPKSMSKEA 569 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHSS--CCCCCTTSCHHH
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHH----HHhC--CCCCCccCCHHH
Confidence 2356789999999999999999999999999999999999999876533222111 1111 123455677899
Q ss_pred HHHHHHhccCCCCCCCCH-----HHHHHH
Q 011349 283 VRLASRCLQYEPRERPNA-----KSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~-----~~il~~ 306 (488)
.+||.+||+.||.+||++ ++|++|
T Consensus 570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 570 VAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 999999999999999997 788776
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=357.76 Aligned_cols=250 Identities=18% Similarity=0.210 Sum_probs=203.7
Q ss_pred CcccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCC----CCChHHHHHHHHHHhhc-CCCCCcccccceecCCe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSA----WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 124 (488)
..|.+++.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.+++.+ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 4678899999999999999996 478999999987532 12345678899999999 69999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 134 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999999999973 456999999999999999999999999 9999999999999999999999999997653
Q ss_pred CC-----CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 205 DG-----KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 205 ~~-----~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
.. ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.................. ....++..
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~ 288 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQE 288 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCTT
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCCcc
Confidence 22 24578999999999986 34788999999999999999999988643211100000001110 12234556
Q ss_pred hHHHHHHHHHHhccCCCCCCC-----CHHHHHHHhc
Q 011349 278 DGTELVRLASRCLQYEPRERP-----NAKSLVASLT 308 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rp-----s~~~il~~l~ 308 (488)
.+..+.+|+.+||..||.+|| ++.+++++..
T Consensus 289 ~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~ 324 (355)
T 1vzo_A 289 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324 (355)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence 678899999999999999999 9999999864
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=360.21 Aligned_cols=259 Identities=14% Similarity=0.111 Sum_probs=208.4
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCC--eeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE--ERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 130 (488)
.|.+.+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 5788899999999999999954 58999999997543 233567889999999999999999999987654 6899999
Q ss_pred cCCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee----cCCCCCeeccCCCcccCCC
Q 011349 131 FMPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~~~ 205 (488)
|++||+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 999999999997432 234999999999999999999999999 9999999999999 7778899999999987654
Q ss_pred C---CccccccCCCCcccccc--------CCcccCCceEeehHHHHHHhhCCCCCCcchhhh-----h---hccccccc-
Q 011349 206 G---KSYSTNLAFTPPEYLRT--------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL-----I---RGKNFLML- 265 (488)
Q Consensus 206 ~---~~~~~t~~y~aPE~~~~--------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~-----~---~~~~~~~~- 265 (488)
. ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... . ........
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (396)
T 4eut_A 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI 248 (396)
T ss_dssp GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCC
T ss_pred CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccc
Confidence 3 24568999999999865 567889999999999999999999875321110 0 00000000
Q ss_pred ------------c--ccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 266 ------------M--DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 266 ------------~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+ ........+...+..+.+++.+||+.||++|||+.++++.+..+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred hhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 0 001112344667889999999999999999999999999998876653
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=349.67 Aligned_cols=249 Identities=14% Similarity=0.138 Sum_probs=202.9
Q ss_pred cccc-ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEe
Q 011349 56 DNIV-SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 56 ~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 130 (488)
|.+. +.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++..+ +||||+++++++...+..++|||
T Consensus 30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e 109 (327)
T 3lm5_A 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE 109 (327)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEE
Confidence 3455 6799999999999995 4689999999975432 2356899999999999 47999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCCCC-
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~- 206 (488)
|++||+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 188 (327)
T 3lm5_A 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188 (327)
T ss_dssp CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence 999999999986545577999999999999999999999999 999999999999987 789999999999876543
Q ss_pred --CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||.............. .............++.+.+
T Consensus 189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~ 266 (327)
T 3lm5_A 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ--VNVDYSEETFSSVSQLATD 266 (327)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCCCCCTTTTTTSCHHHHH
T ss_pred ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh--cccccCchhhcccCHHHHH
Confidence 245789999999999999999999999999999999999998865433221111000 0111112223346788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHh
Q 011349 285 LASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+||+.||.+|||+.+++++-
T Consensus 267 li~~~L~~dP~~Rpt~~~ll~h~ 289 (327)
T 3lm5_A 267 FIQSLLVKNPEKRPTAEICLSHS 289 (327)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTCG
T ss_pred HHHHHcCCChhhCcCHHHHhCCH
Confidence 99999999999999999999873
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=342.12 Aligned_cols=254 Identities=15% Similarity=0.174 Sum_probs=205.1
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.|.+++.||+|+||.||+|... +++.||||+++..... ..+.+.+|+.++++++||||+++++++.+....++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 3578889999999999999964 6899999998765322 35679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC----CCeeccCCCcccC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNS 203 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 203 (488)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||++...
T Consensus 86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999999963 456999999999999999999999999 99999999999998877 8999999999866
Q ss_pred CCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 204 RDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 204 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
... ....+|+.|+|||.+.+..++.++||||||+++|+|++|..||.............. .............+.
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISA--VNYDFDEEYFSNTSE 240 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT--TCCCCCHHHHTTCCH
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHh--cccCCcchhcccCCH
Confidence 443 234689999999999988999999999999999999999998865432211110000 000000011123457
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH--hchhhcc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS--LTPLQKE 313 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~--l~~~~~~ 313 (488)
.+.+++.+||..||.+|||+.+++++ ++.++..
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 89999999999999999999999986 4444443
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-44 Score=365.72 Aligned_cols=247 Identities=19% Similarity=0.171 Sum_probs=203.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||+||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++.+....++||||
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 102 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEc
Confidence 468899999999999999995 478999999986432 23467899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec---CCCCCeeccCCCcccCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~-- 206 (488)
+.||+|.+.+.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 103 ~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 999999998863 456999999999999999999999999 99999999999995 5667999999999866543
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||++.+ .++.++|||||||++|+|++|.+||................. ....+.....++++.+|
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKY--AFDLPQWRTISDDAKDL 256 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CSCSGGGGGSCHHHHHH
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCcccCCCCHHHHHH
Confidence 24578999999999975 589999999999999999999999876532221111000000 00011112456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+||..||.+|||+.++++|-
T Consensus 257 i~~~L~~dp~~R~t~~~~l~hp 278 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLEHP 278 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHHCH
T ss_pred HHHHcCCChhhCcCHHHHhcCH
Confidence 9999999999999999999973
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=379.32 Aligned_cols=244 Identities=22% Similarity=0.270 Sum_probs=202.6
Q ss_pred ccCCCCCCceEEEEEe---CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLV---DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++||+|+||.||+|.+ ..++.||||+++.... ...+.+.+|+.+|++++|||||++++++. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 3689999999999964 3467899999976432 22468999999999999999999999986 4568999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-------
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------- 207 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------- 207 (488)
|+|.+++. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 454 g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 99999997 4567999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...+|+.|+|||++.+..++.++|||||||++|||+| |+.||........ ...+........+..++.++.+|+
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~-----~~~i~~~~~~~~p~~~~~~l~~li 605 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-----TAMLEKGERMGCPAGCPREMYDLM 605 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----HHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHHHHHH
Confidence 2345678999999999999999999999999999998 9988866433221 122222223345566788999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
.+||+.||++|||+.+|++.|+.+..
T Consensus 606 ~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 606 NLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 99999999999999999999987654
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=349.01 Aligned_cols=252 Identities=17% Similarity=0.180 Sum_probs=191.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCccccccee--------cCCe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCC--------EGEE 124 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~--------~~~~ 124 (488)
.+++++.||+|+||.||+|.. .+++.||||++........+.+.+|+.++.++. ||||+++++++. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 468889999999999999995 578999999987655444567899999999996 999999999883 3445
Q ss_pred eeEEEecCCCCChhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeecCCCCCeeccCCCccc
Q 011349 125 RLLVAEFMPNETLSKHLFH-WENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
.++||||+. |+|.+++.. .....+++..++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||+++.
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 187 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcccee
Confidence 899999996 799888864 23457999999999999999999999985 499999999999999999999999999986
Q ss_pred CCCCC----------------ccccccCCCCcccc---ccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc
Q 011349 203 SRDGK----------------SYSTNLAFTPPEYL---RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL 263 (488)
Q Consensus 203 ~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 263 (488)
..... ...+|+.|+|||++ .+..++.++|||||||++|+|+||+.||.......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------- 260 (337)
T 3ll6_A 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR------- 260 (337)
T ss_dssp CSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred ccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-------
Confidence 54322 33578999999998 55678999999999999999999999886432211
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
..............+..+.+|+.+||+.||.+|||+.+++++|+.+.....
T Consensus 261 -~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 -IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 111111112223344668999999999999999999999999999887543
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=367.80 Aligned_cols=245 Identities=18% Similarity=0.135 Sum_probs=205.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.|.+++.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 467889999999999999995 478999999997543 2346789999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCCC
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~~ 207 (488)
|+.||+|.+.+. ....+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 107 ~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 107 VYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred cCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 999999999887 4567999999999999999999999999 9999999999999 567899999999998765443
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC--CCChhhHHHH
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG--HFSNDDGTEL 282 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l 282 (488)
...||+.|+|||++.+ .++.++|||||||++|+|++|.+||........... +....... +.....++.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~----i~~~~~~~~~~~~~~~s~~~ 258 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK----VEKGKYTFELPQWKKVSESA 258 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHCCCCCCSGGGGGSCHHH
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HHcCCCCCCCcccccCCHHH
Confidence 3468999999999975 689999999999999999999999876432221111 11111111 1113456889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.+|+.+||+.||.+|||+.++++|-
T Consensus 259 ~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 259 KDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred HHHHHHHCCCChhHCcCHHHHhhCh
Confidence 9999999999999999999999974
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=348.08 Aligned_cols=244 Identities=16% Similarity=0.139 Sum_probs=205.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.+++.||+|+||.||++.. .+++.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 4678889999999999999995 45888999998754322 2457889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||+++++|.+++.. ...+++.+++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 197 (335)
T 2owb_A 121 ELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 197 (335)
T ss_dssp CCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred ecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCccc
Confidence 99999999998863 456999999999999999999999999 999999999999999999999999999865422
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||.+.+..++.++|||||||++|+|++|+.||.......... .+... ....+...+..+.+|
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~l 271 (335)
T 2owb_A 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----RIKKN--EYSIPKHINPVAASL 271 (335)
T ss_dssp BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHHT--CCCCCTTSCHHHHHH
T ss_pred ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH----HHhcC--CCCCCccCCHHHHHH
Confidence 24568999999999998889999999999999999999999886543221110 00000 112344556789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||++|||+.+++++
T Consensus 272 i~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 272 IQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999987
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=348.25 Aligned_cols=253 Identities=18% Similarity=0.190 Sum_probs=198.9
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec-------
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE------- 121 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 121 (488)
..+.|.+++.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.+++.++||||+++++++..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 346788999999999999999995 57899999998655422 24578899999999999999999999876
Q ss_pred -CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 122 -GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 122 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
.+..++||||++ ++|.+.+.. ....+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCE-HDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccC-CCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 346899999997 577777754 3456999999999999999999999999 999999999999999999999999999
Q ss_pred ccCCC--------CCccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-------ccc
Q 011349 201 KNSRD--------GKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-------FLM 264 (488)
Q Consensus 201 ~~~~~--------~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-------~~~ 264 (488)
+.... .....||+.|+|||++.+ ..++.++|||||||++|||+||.+||............ ...
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 76532 123467999999999876 45799999999999999999999988754322110000 000
Q ss_pred ccccc------------cCCCCC--h-----hhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 265 LMDSC------------LEGHFS--N-----DDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 265 ~~~~~------------~~~~~~--~-----~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
..... ...... . ..++.+.+|+.+||+.||.+|||+.++++|-
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 313 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCC
Confidence 00000 000000 0 0146689999999999999999999999983
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-45 Score=359.78 Aligned_cols=248 Identities=13% Similarity=0.025 Sum_probs=184.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhc--CCCCCccccc-------ceecC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLL--RSERLVNLIG-------CCCEG 122 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l--~h~niv~~~~-------~~~~~ 122 (488)
+.+++.||+|+||.||+|.+ .+|+.||||++....... .+.+.+|+.+++.+ +||||++++. ++...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 67888999999999999995 478999999998765322 34677886555555 6999887553 33222
Q ss_pred -----------------CeeeEEEecCCCCChhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCcccccc
Q 011349 123 -----------------EERLLVAEFMPNETLSKHLFHWENQPMKWAMR------VRVALYLAQALDYCSSKGRALYHDL 179 (488)
Q Consensus 123 -----------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~iiH~Dl 179 (488)
...++||||++ |+|.+++... +..+++..+ +.++.||+.||.|||+++ |+||||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHrDi 220 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHGHF 220 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEETTC
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccCcC
Confidence 34799999998 8999999752 234566666 788899999999999999 999999
Q ss_pred cCCceeecCCCCCeeccCCCcccCCCCC-ccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCCCCcchhhh
Q 011349 180 NTYRILFDQDGNPRLSCFGLMKNSRDGK-SYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDL 256 (488)
Q Consensus 180 kp~Nill~~~~~~kl~Dfgla~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~ 256 (488)
||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.......
T Consensus 221 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~ 300 (371)
T 3q60_A 221 TPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGI 300 (371)
T ss_dssp SGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTC
T ss_pred CHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccc
Confidence 9999999999999999999998776554 5567899999999987 678999999999999999999999887653221
Q ss_pred hhcccc---ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 257 IRGKNF---LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 257 ~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... ................++.+.+|+.+||+.||++|||+.++++|
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 301 KGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred ccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 111110 11111111112223567899999999999999999999999876
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=348.22 Aligned_cols=253 Identities=19% Similarity=0.191 Sum_probs=197.4
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-----hHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-----SRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
...|.+++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 34578889999999999999995 468999999997543221 246889999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++ +|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 99999985 88888864 3456999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc-------ccc-------c
Q 011349 207 ----KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------MLM-------D 267 (488)
Q Consensus 207 ----~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------~~~-------~ 267 (488)
....+|+.|+|||.+.+. .++.++|||||||++|||++|.+|+.+..........+. ..+ +
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence 245689999999999764 588999999999999999999988765432111000000 000 0
Q ss_pred cccC---CCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 268 SCLE---GHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 268 ~~~~---~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.... ... ....+.++.+|+.+||..||.+|||+.++++|-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 0000 000 1234578999999999999999999999999843
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=350.80 Aligned_cols=251 Identities=16% Similarity=0.216 Sum_probs=202.2
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhh--cCCCCCcccccceecCC----eeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGL--LRSERLVNLIGCCCEGE----ERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~ 129 (488)
+.+.+.||+|+||.||+|.. +|+.||||+++.. ....+.+|++++.. ++||||+++++++.... ..++||
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~ 119 (342)
T 1b6c_B 44 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 119 (342)
T ss_dssp CEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEE
T ss_pred EEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEE
Confidence 47888999999999999997 5889999999643 35678899999988 68999999999998765 789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS--------SKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
||+++|+|.+++.. ..+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|||++.
T Consensus 120 e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 195 (342)
T 1b6c_B 120 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAV 195 (342)
T ss_dssp CCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCce
Confidence 99999999999953 46999999999999999999999 778 9999999999999999999999999997
Q ss_pred cCCCC--------CccccccCCCCccccccC------CcccCCceEeehHHHHHHhhC----------CCCCCcchhhhh
Q 011349 202 NSRDG--------KSYSTNLAFTPPEYLRTG------RVIPESVVYSFGTLLLDLLSG----------KHIPPSHALDLI 257 (488)
Q Consensus 202 ~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDv~slG~il~el~tg----------~~p~~~~~~~~~ 257 (488)
..... ....||+.|+|||.+.+. .++.++|||||||++|||+|| ..||........
T Consensus 196 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~ 275 (342)
T 1b6c_B 196 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 275 (342)
T ss_dssp EEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred eccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcc
Confidence 65432 234689999999999865 344789999999999999999 555543211000
Q ss_pred hccccc-cccccccCCCCC-----hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 258 RGKNFL-MLMDSCLEGHFS-----NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 258 ~~~~~~-~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
....+. ...........+ ..++..+.+|+.+||+.||++|||+.+++++|+.+..+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 276 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 000000 111111222222 356788999999999999999999999999999988764
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=341.54 Aligned_cols=254 Identities=17% Similarity=0.210 Sum_probs=205.6
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCccccccee--cCCeeeE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCC--EGEERLL 127 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~l 127 (488)
.+.|.+++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 45678899999999999999995 46899999999765432 2456899999999999999999999875 3568999
Q ss_pred EEecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCC----cccccccCCceeecCCCCCeeccCCCcc
Q 011349 128 VAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKGR----ALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
||||+++++|.+++... ....+++..++.++.||+.||.|||+.++ ++||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999998642 34559999999999999999999999763 9999999999999999999999999998
Q ss_pred cCCCCC----ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 202 NSRDGK----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 202 ~~~~~~----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
...... ...+|+.|+|||.+.+..++.++||||||+++|+|+||..|+.......... .+........+..
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~i~~~~~~~~~~~ 239 (279)
T 2w5a_A 165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG-----KIREGKFRRIPYR 239 (279)
T ss_dssp HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-----HHHHTCCCCCCTT
T ss_pred eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHH-----HHhhcccccCCcc
Confidence 765433 3467899999999998889999999999999999999998876543221111 1111111234445
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
.+.++.+++.+||+.||.+|||+.++++++....
T Consensus 240 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 240 YSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred cCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 6788999999999999999999999999875433
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=345.03 Aligned_cols=247 Identities=18% Similarity=0.206 Sum_probs=199.0
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.+++.||+|+||.||+|... +++.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 99 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP 99 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCT
T ss_pred ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCC
Confidence 4688899999999999999964 589999999987766667889999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccC----CCCCcc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS----RDGKSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~~~~~ 209 (488)
+++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++... ......
T Consensus 100 ~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 177 (302)
T 2j7t_A 100 GGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177 (302)
T ss_dssp TEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred CCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCccccccccccccc
Confidence 9999998864 2456999999999999999999999999 999999999999999999999999987532 123345
Q ss_pred ccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 210 STNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 210 ~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
.||+.|+|||.+. +..++.++||||||+++|+|++|..|+............... .......+...+..+.+
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~ 254 (302)
T 2j7t_A 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---DPPTLLTPSKWSVEFRD 254 (302)
T ss_dssp -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS---CCCCCSSGGGSCHHHHH
T ss_pred cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc---CCcccCCccccCHHHHH
Confidence 7899999999983 567889999999999999999999887654221111000000 00111223455788999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+||+.||.+|||+.++++|
T Consensus 255 li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 255 FLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHHHHSCSCTTTSCCHHHHTTS
T ss_pred HHHHHcccChhhCCCHHHHhcC
Confidence 9999999999999999999876
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=361.59 Aligned_cols=249 Identities=16% Similarity=0.202 Sum_probs=194.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecC-----Cee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 125 (488)
..|.+++.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.+|++++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 3568899999999999999994 56889999999754322 245789999999999999999999998766 568
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
|+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 99999996 69999997 4567999999999999999999999999 99999999999999999999999999986543
Q ss_pred C--------------------------CccccccCCCCcccc-ccCCcccCCceEeehHHHHHHhhCCCCCC--------
Q 011349 206 G--------------------------KSYSTNLAFTPPEYL-RTGRVIPESVVYSFGTLLLDLLSGKHIPP-------- 250 (488)
Q Consensus 206 ~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~sDv~slG~il~el~tg~~p~~-------- 250 (488)
. ....||+.|+|||++ .+..++.++|||||||++|||++|..|+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p 261 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence 2 345789999999986 45679999999999999999998544332
Q ss_pred ---cchh------------------hhh------------------hcccccccccccc-CCCC-----ChhhHHHHHHH
Q 011349 251 ---SHAL------------------DLI------------------RGKNFLMLMDSCL-EGHF-----SNDDGTELVRL 285 (488)
Q Consensus 251 ---~~~~------------------~~~------------------~~~~~~~~~~~~~-~~~~-----~~~~~~~l~~l 285 (488)
+... +.. ........+.... .... .+..++++.+|
T Consensus 262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 341 (432)
T 3n9x_A 262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341 (432)
T ss_dssp SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence 2110 000 0000000000000 0000 02356789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||..||.+|||+.++++|
T Consensus 342 l~~mL~~dP~~R~ta~e~L~H 362 (432)
T 3n9x_A 342 LESMLKFNPNKRITIDQALDH 362 (432)
T ss_dssp HHHHSCSSTTTSCCHHHHHTC
T ss_pred HHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999997
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-45 Score=363.68 Aligned_cols=240 Identities=13% Similarity=0.091 Sum_probs=188.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCC---CCChHHHHHHH---HHHhhcCCCCCccccc-------ce
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA---WPDSRQFLEEA---RAVGLLRSERLVNLIG-------CC 119 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~---~~l~~l~h~niv~~~~-------~~ 119 (488)
..+.+++.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+ +++++++|||||++++ ++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 456778899999999999999 4679999999997442 23356789999 5555668999999984 44
Q ss_pred ecCC-----------------eeeEEEecCCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccc
Q 011349 120 CEGE-----------------ERLLVAEFMPNETLSKHLFHWE-----NQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177 (488)
Q Consensus 120 ~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~ 177 (488)
...+ ..++||||+ +|+|.+++.... ...+++..++.|+.||+.||.|||+.+ |+||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHr 230 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHT 230 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECS
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecC
Confidence 3332 378999999 689999997421 123445888999999999999999999 9999
Q ss_pred cccCCceeecCCCCCeeccCCCcccCCCC-CccccccCCCCccccccC-----------CcccCCceEeehHHHHHHhhC
Q 011349 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTG-----------RVIPESVVYSFGTLLLDLLSG 245 (488)
Q Consensus 178 Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~sDv~slG~il~el~tg 245 (488)
||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||+||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg 309 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999865443 23456 999999999887 799999999999999999999
Q ss_pred CCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 246 KHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 246 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+.||....... ....+.. .....++++.+|+.+||..||++|||+.+++++
T Consensus 310 ~~Pf~~~~~~~----~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 310 DLPITKDAALG----GSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp SCCC------C----CSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred CCCCccccccc----chhhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 99886542111 1111111 112446789999999999999999999999985
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=343.72 Aligned_cols=253 Identities=21% Similarity=0.260 Sum_probs=197.5
Q ss_pred CcccccccCCCCCCceEEEEEeC--CCc--EEEEEEccCCCC---CChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD--EDR--WIAVKRFNRSAW---PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
..+.+++.||+|+||.||+|.+. +++ .||||+++.... ...+.+.+|+.++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 35788899999999999999843 333 689999976532 23467899999999999999999999987654 89
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 97 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeEecccCCCHHHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 99999999999999864 2356999999999999999999999999 999999999999999999999999999876543
Q ss_pred C-------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 207 K-------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 207 ~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
. ...+|+.|+|||.+.+..++.++||||||+++|+|++ |..||.......... .+.........+...
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~ 250 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH----KIDKEGERLPRPEDC 250 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----HHHTSCCCCCCCTTC
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH----HHHccCCCCCCCcCc
Confidence 2 2345778999999998889999999999999999999 888876543221111 111111122334456
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+..+.+++.+||..||.+|||+.++++.|+.+...
T Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 78899999999999999999999999999987764
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-44 Score=366.02 Aligned_cols=246 Identities=18% Similarity=0.168 Sum_probs=198.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||+|.. .++..||||++.... ......+.+|+.+++.++||||+++++++.+....++||||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 117 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 468899999999999999995 468899999997653 23356799999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~-- 206 (488)
++||+|.+.+.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 999999998863 456999999999999999999999999 999999999999975 455999999999865443
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|+|||++. +.++.++|||||||++|+|++|.+||.................. .........++.+.+|
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT--FDSPEWKNVSEGAKDL 271 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCSGGGTTSCHHHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCchhcccCCHHHHHH
Confidence 3457899999999986 56999999999999999999999998765332211111000000 0001112356789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||.+|||+.++++|
T Consensus 272 i~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHCCCChhhCccHHHHhcC
Confidence 999999999999999999987
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=342.04 Aligned_cols=247 Identities=15% Similarity=0.187 Sum_probs=201.3
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
...+.+++.||+|+||.||+|... +|+.||||++.... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 345788999999999999999954 58999999997643 457899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 106 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (314)
T 3com_A 106 CGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 183 (314)
T ss_dssp CTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence 999999999853 3467999999999999999999999999 999999999999999999999999999765432 3
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...+|+.|+|||.+.+..++.++||||||+++|+|++|..||.......... ..... .......+...+..+.+++.
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~l~~li~ 260 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-MIPTN--PPPTFRKPELWSDNFTDFVK 260 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHS--CCCCCSSGGGSCHHHHHHHH
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhcC--CCcccCCcccCCHHHHHHHH
Confidence 4568899999999999899999999999999999999998876532211100 00000 00111123345688999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||..||.+|||+.+++++
T Consensus 261 ~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 261 QCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HHTCSCTTTSCCHHHHTTS
T ss_pred HHccCChhhCcCHHHHHhC
Confidence 9999999999999999986
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=342.74 Aligned_cols=256 Identities=14% Similarity=0.154 Sum_probs=203.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccce-ecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC-CEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~ 132 (488)
.|.+++.||+|+||.||+|.. .+++.||||++.... ....+.+|+.+++.++|++++..+..+ ..++..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 4hgt_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence 457888999999999999994 678999999876543 234688999999999988877766655 5667889999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCC---
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~--- 206 (488)
+++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 88 -~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 88 -GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp -CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred -CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 8999999864 3456999999999999999999999999 9999999999999 78999999999999865432
Q ss_pred --------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC---CCC
Q 011349 207 --------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG---HFS 275 (488)
Q Consensus 207 --------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 275 (488)
....||+.|+|||.+.+..++.++|||||||++|+|++|+.||........ .............. ...
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 243 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTPIEVLC 243 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHHHHHSCHHHHT
T ss_pred ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh-hhhhhhhhcccccchhhhhh
Confidence 245689999999999999999999999999999999999999865311100 00000000000000 011
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccCC
Q 011349 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316 (488)
Q Consensus 276 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 316 (488)
...++.+.+++.+||+.||++|||+.++++.|+.+......
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 244 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 23467899999999999999999999999999998876543
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-44 Score=337.58 Aligned_cols=244 Identities=19% Similarity=0.239 Sum_probs=198.4
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.|.+++.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 46788899999999999999964 78999999986432 233567899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 167 (276)
T 2h6d_A 91 EYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 167 (276)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred eccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCcce
Confidence 99999999999973 356999999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||........... +... ....+...+..+.++
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~--~~~~~~~~~~~l~~l 241 (276)
T 2h6d_A 168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK----IRGG--VFYIPEYLNRSVATL 241 (276)
T ss_dssp ---------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTSCHHHHHH
T ss_pred ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH----hhcC--cccCchhcCHHHHHH
Confidence 24467899999999987665 6899999999999999999998865432211110 0000 112344456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||.+|||+.++++|
T Consensus 242 i~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 242 LMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHccCChhhCCCHHHHHhC
Confidence 999999999999999999997
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=353.68 Aligned_cols=248 Identities=17% Similarity=0.207 Sum_probs=183.3
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecC------Ce
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEG------EE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~ 124 (488)
..|.+++.||+|+||.||+|. ..+|+.||||++...... ..+.+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 456889999999999999999 457899999999764322 245788999999999999999999998654 56
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++|||++ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 689999885 367999999999999999999999999 9999999999999999999999999998754
Q ss_pred CC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-------------------cc
Q 011349 205 DG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-------------------FL 263 (488)
Q Consensus 205 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-------------------~~ 263 (488)
.. ....+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||.+.......... ..
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 43 35678999999999987 67899999999999999999999998764321110000 00
Q ss_pred cccc---cccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 MLMD---SCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ~~~~---~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+. ...... .....++.+.+|+.+||..||.+|||+.++++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 000000 011245779999999999999999999999987
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=359.89 Aligned_cols=250 Identities=17% Similarity=0.189 Sum_probs=201.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc------CCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL------RSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~~l 127 (488)
.|.+++.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+.+++.+ .|+||+++++++......++
T Consensus 98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 468889999999999999984 468999999997543 2245678899998888 56799999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC--CeeccCCCcccCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN--PRLSCFGLMKNSRD 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~~~~ 205 (488)
||||+. ++|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++. +||+|||++.....
T Consensus 177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 999996 79999997655567999999999999999999999999 999999999999999887 99999999976544
Q ss_pred C-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------------cccccc
Q 011349 206 G-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------------FLMLMD 267 (488)
Q Consensus 206 ~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------------~~~~~~ 267 (488)
. ....+|+.|+|||++.+..++.++|||||||++|||+||.+||............ ....++
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~ 334 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBC
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccC
Confidence 3 3567899999999999999999999999999999999999888654221100000 000000
Q ss_pred c--------------------------------ccC----CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 268 S--------------------------------CLE----GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 268 ~--------------------------------~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
. ... ...+...++.+.+|+.+||+.||++|||+.++++|-
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hp 410 (429)
T 3kvw_A 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHP 410 (429)
T ss_dssp TTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred CCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCCh
Confidence 0 000 001112257799999999999999999999999973
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=343.59 Aligned_cols=244 Identities=16% Similarity=0.202 Sum_probs=199.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceec--CCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCE--GEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~ 129 (488)
..|.+++.||+|+||.||+|. ..+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 467889999999999999998 467899999999743 3578999999999997 9999999999987 56789999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCCC--
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~-- 206 (488)
||+++++|.+++. .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 9999999999884 3899999999999999999999999 99999999999999776 8999999999865433
Q ss_pred -CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhh---------hc----------------
Q 011349 207 -KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI---------RG---------------- 259 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~---------~~---------------- 259 (488)
....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||........ ..
T Consensus 187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T 3nsz_A 187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266 (330)
T ss_dssp CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccccc
Confidence 34567899999999987 6789999999999999999999988843211000 00
Q ss_pred -------cccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 -------KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 -------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
......+........+...++++.+|+.+||+.||.+|||+.++++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000111111222233357889999999999999999999999987
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-44 Score=340.15 Aligned_cols=246 Identities=19% Similarity=0.218 Sum_probs=198.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec----CCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~l 127 (488)
.+.+.+.||+|+||.||+|.. .++..||+|++...... ..+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 356777899999999999995 56888999998754322 24578999999999999999999998865 356899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeec-CCCCCeeccCCCcccCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~ 205 (488)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ +++||||||+|||++ .++.+||+|||++.....
T Consensus 107 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 9999999999999963 356999999999999999999999985 599999999999997 889999999999976544
Q ss_pred CC--ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 206 GK--SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 206 ~~--~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
.. ...||+.|+|||.+. +.++.++|||||||++|+|++|+.||........... ...........+...++++.
T Consensus 185 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~ 260 (290)
T 1t4h_A 185 SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAIPEVK 260 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHTTTCCCGGGGGCCCHHHH
T ss_pred cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHH---HHhccCCccccCCCCCHHHH
Confidence 32 356899999999887 4689999999999999999999998865322111110 01111111112233457899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||+.||.+|||+.++++|
T Consensus 261 ~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 261 EIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCChhhCCCHHHHhhC
Confidence 99999999999999999999986
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=344.14 Aligned_cols=253 Identities=18% Similarity=0.261 Sum_probs=186.9
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
.+.+.+++.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 4567889999999999999999 45788999999875432 234678899999999999999999999999999999999
Q ss_pred cCCCCChhhhhccC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 131 FMPNETLSKHLFHW------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 131 ~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
|++|++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 172 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLA 172 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHCC
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchheec
Confidence 99999999998631 3456999999999999999999999999 9999999999999999999999999987543
Q ss_pred CC---------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc----ccccccccccc
Q 011349 205 DG---------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG----KNFLMLMDSCL 270 (488)
Q Consensus 205 ~~---------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~ 270 (488)
.. ....+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||.......... ...........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (303)
T 2vwi_A 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ 252 (303)
T ss_dssp ---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC---
T ss_pred cCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccc
Confidence 22 23468999999999876 568999999999999999999999886532211110 00000001111
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........+..+.+++.+||+.||.+|||+.+++++
T Consensus 253 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 253 DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp --CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 112233456789999999999999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-44 Score=345.00 Aligned_cols=255 Identities=20% Similarity=0.246 Sum_probs=200.9
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
.++.+.+++.||+|+||.||+|.... .||||+++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35677899999999999999998743 399999975432 23456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD---- 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 205 (488)
||++|++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++ ++.+||+|||+++....
T Consensus 109 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp BCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred ecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999964 3446999999999999999999999999 99999999999998 68999999999875421
Q ss_pred -----CCccccccCCCCcccccc---------CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC
Q 011349 206 -----GKSYSTNLAFTPPEYLRT---------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 206 -----~~~~~~t~~y~aPE~~~~---------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
.....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||............ ......
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~~~ 261 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM----GTGMKP 261 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHH----HTTCCC
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh----ccCCCC
Confidence 123357899999999874 34788999999999999999999988654332211111 011111
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcccC
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAE 315 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 315 (488)
...+...+.++.+++.+||..||.+|||+.++++.|+.+.....
T Consensus 262 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11122345679999999999999999999999999999887653
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=338.26 Aligned_cols=245 Identities=16% Similarity=0.128 Sum_probs=205.9
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.+.+.||+|+||.||+|... +++.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 45778899999999999999954 5888999998754322 2456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||+++++|.+++.. ...+++.+++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 95 e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 171 (294)
T 2rku_A 95 ELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 171 (294)
T ss_dssp ECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCccc
Confidence 99999999998863 456999999999999999999999999 999999999999999999999999999865422
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....+|+.|+|||.+.+..++.++||||||+++|+|+||..||.......... ..... ....+...+..+.++
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~l 245 (294)
T 2rku_A 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----RIKKN--EYSIPKHINPVAASL 245 (294)
T ss_dssp BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----HHHTT--CCCCCTTSCHHHHHH
T ss_pred cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHhhc--cCCCccccCHHHHHH
Confidence 24568999999999998889999999999999999999999886543221111 01011 112344556789999
Q ss_pred HHHhccCCCCCCCCHHHHHHHh
Q 011349 286 ASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l 307 (488)
+.+||+.||++|||+.+++++-
T Consensus 246 i~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 246 IQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp HHHHTCSSGGGSCCGGGGGGSH
T ss_pred HHHHcccChhhCcCHHHHhhCh
Confidence 9999999999999999999874
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-44 Score=366.50 Aligned_cols=246 Identities=17% Similarity=0.141 Sum_probs=200.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-------------CChHHHHHHHHHHhhcCCCCCcccccce
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-------------PDSRQFLEEARAVGLLRSERLVNLIGCC 119 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~~~ 119 (488)
..|.++++||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+|++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 3578899999999999999995 4688999999975432 2246789999999999999999999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC---CCeecc
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG---NPRLSC 196 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~D 196 (488)
.+....++||||++||+|.+.+.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999999998863 456999999999999999999999999 99999999999998776 689999
Q ss_pred CCCcccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCC
Q 011349 197 FGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 273 (488)
Q Consensus 197 fgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (488)
||+++..... ....||+.|+|||++. +.++.++|||||||++|+|++|.+||............ ........
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i----~~~~~~~~ 267 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV----EKGKYYFD 267 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHCCCCCC
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HcCCCCCC
Confidence 9999876543 3457899999999987 56899999999999999999999998765332211110 00000000
Q ss_pred --CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 274 --FSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 274 --~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.....++++.+|+.+||..||.+|||+.++++|-
T Consensus 268 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~ 303 (504)
T 3q5i_A 268 FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303 (504)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH
Confidence 0023467899999999999999999999999873
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=348.91 Aligned_cols=251 Identities=18% Similarity=0.207 Sum_probs=203.8
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC-----------------hHHHHHHHHHHhhcCCCCCcccc
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD-----------------SRQFLEEARAVGLLRSERLVNLI 116 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~~~ 116 (488)
+.|.+++.||+|+||.||+|.. +++.||||++....... .+.+.+|+.++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 5678899999999999999999 99999999987432111 17899999999999999999999
Q ss_pred cceecCCeeeEEEecCCCCChhhh------hccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCC
Q 011349 117 GCCCEGEERLLVAEFMPNETLSKH------LFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~ 189 (488)
+++.+.+..++||||+++++|.++ +.......+++..++.++.||+.||.|||+ .+ ++||||||+||+++.+
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKN 188 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTT
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCC
Confidence 999999999999999999999998 654336789999999999999999999999 88 9999999999999999
Q ss_pred CCCeeccCCCcccCCCC--CccccccCCCCccccccC-Cccc-CCceEeehHHHHHHhhCCCCCCcchh-hh----hhcc
Q 011349 190 GNPRLSCFGLMKNSRDG--KSYSTNLAFTPPEYLRTG-RVIP-ESVVYSFGTLLLDLLSGKHIPPSHAL-DL----IRGK 260 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~sDv~slG~il~el~tg~~p~~~~~~-~~----~~~~ 260 (488)
+.+||+|||++...... ....+|+.|+|||.+.+. .++. ++|||||||++|||++|..||..... .. ....
T Consensus 189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~ 268 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK 268 (348)
T ss_dssp SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSC
T ss_pred CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc
Confidence 99999999999865432 345789999999999886 6666 99999999999999999998865422 11 1011
Q ss_pred ccccccc------c---ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 NFLMLMD------S---CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 ~~~~~~~------~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....... . ..........+..+.+|+.+||+.||.+|||+.++++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 269 NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000000 0 00000113456889999999999999999999999986
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=349.96 Aligned_cols=245 Identities=20% Similarity=0.202 Sum_probs=200.9
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC--------hHHHHHHHHHHhhc-CCCCCcccccceecCCe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD--------SRQFLEEARAVGLL-RSERLVNLIGCCCEGEE 124 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 124 (488)
.|.+.+.||+|+||.||+|... +|+.||||++....... .+.+.+|+.+++++ +||||+++++++...+.
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 174 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence 4677888999999999999964 79999999987654211 34678999999999 79999999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||++|++|.+++.. ...+++..+..++.||+.||.|||+.| ++||||||+|||++.++.+||+|||++....
T Consensus 175 ~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 9999999999999999973 456999999999999999999999999 9999999999999999999999999998765
Q ss_pred CC---CccccccCCCCcccccc------CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC-
Q 011349 205 DG---KSYSTNLAFTPPEYLRT------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF- 274 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 274 (488)
.. ....||+.|+|||++.+ ..++.++|||||||++|+|+||..||........... +.........
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~----i~~~~~~~~~~ 327 (365)
T 2y7j_A 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM----IMEGQYQFSSP 327 (365)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHTCCCCCHH
T ss_pred CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhCCCCCCCc
Confidence 43 34578999999999864 3588899999999999999999998865422111100 0000000000
Q ss_pred -ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 275 -SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 275 -~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+..+.+++.+||+.||++|||+.++++|
T Consensus 328 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 328 EWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01235679999999999999999999999986
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-44 Score=355.53 Aligned_cols=247 Identities=18% Similarity=0.222 Sum_probs=196.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC----------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG---------- 122 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---------- 122 (488)
..|.+++.||+|+||.||+|.. .+|+.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 3568889999999999999994 679999999987543 2334799999999999999999998543
Q ss_pred ----------------------------CeeeEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 011349 123 ----------------------------EERLLVAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKG 172 (488)
Q Consensus 123 ----------------------------~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 172 (488)
...++||||++ |+|.+.+.. ..+..+++..+..++.||+.||.|||+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 161 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG 161 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 34889999998 588777753 24567999999999999999999999999
Q ss_pred CcccccccCCceeec-CCCCCeeccCCCcccCCCC---CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCC
Q 011349 173 RALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKH 247 (488)
Q Consensus 173 ~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~ 247 (488)
|+||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||.+.+. .++.++|||||||++|||++|+.
T Consensus 162 -i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 162 -ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp -EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred -CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 99999999999997 6889999999999865433 345779999999998874 48999999999999999999999
Q ss_pred CCCcchhhhhhccc-----------------------cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHH
Q 011349 248 IPPSHALDLIRGKN-----------------------FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304 (488)
Q Consensus 248 p~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il 304 (488)
||.+.......... +.......+...++...++++.+|+.+||+.||.+|||+.+++
T Consensus 241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (383)
T 3eb0_A 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM 320 (383)
T ss_dssp SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 88764321110000 0000000111113344677899999999999999999999999
Q ss_pred HH
Q 011349 305 AS 306 (488)
Q Consensus 305 ~~ 306 (488)
+|
T Consensus 321 ~h 322 (383)
T 3eb0_A 321 AH 322 (383)
T ss_dssp TS
T ss_pred cC
Confidence 87
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=348.87 Aligned_cols=248 Identities=15% Similarity=0.182 Sum_probs=191.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCC------e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGE------E 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 124 (488)
..|.+++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 4578899999999999999994 46889999999764322 2356889999999999999999999987654 6
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||++ ++|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 899999997 57888874 34899999999999999999999999 9999999999999999999999999998665
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc------------------
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL------------------ 263 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~------------------ 263 (488)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+............
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 43 345789999999999998999999999999999999999998875432111000000
Q ss_pred ---------------cccccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 264 ---------------MLMDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 264 ---------------~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
........+. .+...+.++.+|+.+||..||.+|||+.++++|-
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 0000000000 0112367899999999999999999999999973
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=339.87 Aligned_cols=248 Identities=18% Similarity=0.219 Sum_probs=188.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-h-HHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-S-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+.+.+++.||+|+||.||+|.. .+|+.||||+++...... . +.+..+...++.++||||+++++++.+++..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 4568899999999999999995 578999999997653222 2 234455556888899999999999999999999999
Q ss_pred cCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 131 FMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
|++ |+|.+++.. .....+++..++.++.||+.||.|||++ + ++||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 997 588777753 1456799999999999999999999998 8 9999999999999999999999999997654432
Q ss_pred ---ccccccCCCCcccc----ccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 ---SYSTNLAFTPPEYL----RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~----~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...||+.|+|||.+ .+..++.++|||||||++|+|+||+.||......... .............+...++
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 241 (290)
T 3fme_A 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ---LKQVVEEPSPQLPADKFSA 241 (290)
T ss_dssp -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH---HHHHHHSCCCCCCTTTSCH
T ss_pred cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHH---HHHHhccCCCCcccccCCH
Confidence 34689999999996 4567899999999999999999999988643221111 1111111111122234568
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+++.+||+.||.+|||+.++++|
T Consensus 242 ~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 242 EFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 89999999999999999999999986
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=348.51 Aligned_cols=259 Identities=15% Similarity=0.197 Sum_probs=198.1
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC-----------hHHHHHHHHHHhhcCCC
Q 011349 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD-----------SRQFLEEARAVGLLRSE 110 (488)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~ 110 (488)
...++....+.| .+++.||+|+||.||+|...+|+.||||++....... .+.+.+|+.++++++||
T Consensus 13 ~~~~~~~~~~~y---~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 89 (362)
T 3pg1_A 13 LIAELHAMQSPY---TVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89 (362)
T ss_dssp HHHHHHHTTCSC---EEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHhccce---EEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCc
Confidence 345566666555 7888899999999999998789999999986543221 26789999999999999
Q ss_pred CCcccccceec-----CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcee
Q 011349 111 RLVNLIGCCCE-----GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRIL 185 (488)
Q Consensus 111 niv~~~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nil 185 (488)
||+++++++.. ....++||||+. |+|.+.+.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||
T Consensus 90 ~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl 166 (362)
T 3pg1_A 90 NILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNIL 166 (362)
T ss_dssp TBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEE
T ss_pred CccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEE
Confidence 99999999854 346899999997 688888864 4457999999999999999999999999 999999999999
Q ss_pred ecCCCCCeeccCCCcccCCCC---CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc
Q 011349 186 FDQDGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261 (488)
Q Consensus 186 l~~~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~ 261 (488)
++.++.+||+|||+++..... ....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||............
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 246 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246 (362)
T ss_dssp ECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred EcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999999999999999754332 34567899999999877 67899999999999999999999988754221110000
Q ss_pred c-------------------ccccccccC-------CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 F-------------------LMLMDSCLE-------GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 ~-------------------~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. ...+..... .......++.+.+|+.+||+.||.+|||+.++++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0 000000000 01122345779999999999999999999999987
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=343.06 Aligned_cols=244 Identities=16% Similarity=0.176 Sum_probs=194.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--------CChHHHHHHHHHHhhcCCCCCcccccceecCCee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--------PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 125 (488)
.|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++++++||||+++++++..+. .
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~ 89 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-Y 89 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-E
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-e
Confidence 467889999999999999995 4688999999975431 11235889999999999999999999986554 8
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC---CeeccCCCccc
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLMKN 202 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~ 202 (488)
++||||+++++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++.
T Consensus 90 ~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 90 YIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 99999999999999886 4567999999999999999999999999 999999999999986654 99999999987
Q ss_pred CCCCC---ccccccCCCCccccc---cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC---C
Q 011349 203 SRDGK---SYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG---H 273 (488)
Q Consensus 203 ~~~~~---~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~ 273 (488)
..... ...||+.|+|||++. +..++.++|||||||++|+|++|..||....... .....+...... .
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~ 242 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQITSGKYNFIPE 242 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS----CHHHHHHHTCCCCCHH
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH----HHHHHHHhCccccCch
Confidence 65442 346799999999974 4678899999999999999999999886432110 000000000000 0
Q ss_pred CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 274 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+..+.+++.+||..||.+|||+.++++|
T Consensus 243 ~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 112346789999999999999999999999976
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-44 Score=358.35 Aligned_cols=247 Identities=23% Similarity=0.230 Sum_probs=193.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC------CeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~l 127 (488)
.|.+++.||+|+||.||+|.+ .+|+.||||++.... ..+.+|+++|+.++|||||++++++... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 467888999999999999996 469999999986543 2345799999999999999999988542 23679
Q ss_pred EEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-CCCeeccCCCcccCC
Q 011349 128 VAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-GNPRLSCFGLMKNSR 204 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 204 (488)
||||++ ++|.+.+.. .....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 999998 467666542 24567999999999999999999999999 9999999999999955 568999999998654
Q ss_pred CC---CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------cccc----
Q 011349 205 DG---KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------FLML---- 265 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------~~~~---- 265 (488)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.......... +...
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 32 355789999999999764 7899999999999999999999998764321100000 0000
Q ss_pred ----ccc----ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 266 ----MDS----CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 266 ----~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
+.. .+...++...++++.+|+.+||..||.+|||+.++++|-
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 000 000012334568899999999999999999999999873
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=337.92 Aligned_cols=251 Identities=18% Similarity=0.131 Sum_probs=204.6
Q ss_pred cCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC---------ChHHHHHHHHHHhhcC-CCCCcccccce
Q 011349 51 SGFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP---------DSRQFLEEARAVGLLR-SERLVNLIGCC 119 (488)
Q Consensus 51 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~-h~niv~~~~~~ 119 (488)
.-+..|.+++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 3456778999999999999999995 46899999999765321 1346889999999996 99999999999
Q ss_pred ecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCC
Q 011349 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199 (488)
Q Consensus 120 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 199 (488)
...+..++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999973 457999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC---CccccccCCCCccccc------cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccccc
Q 011349 200 MKNSRDG---KSYSTNLAFTPPEYLR------TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270 (488)
Q Consensus 200 a~~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 270 (488)
+...... ....+|+.|+|||.+. ...++.++||||||+++|+|++|..|+................. ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~ 248 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--QF 248 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CC
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCc--cc
Confidence 9865443 2456899999999985 35688899999999999999999998865432211110000000 01
Q ss_pred CCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 271 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........+..+.+++.+||+.||.+|||+.++++|
T Consensus 249 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 249 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 111123457889999999999999999999999986
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=357.77 Aligned_cols=255 Identities=15% Similarity=0.174 Sum_probs=204.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCC-CCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS-ERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~ 131 (488)
..|.+++.||+|+||.||+|.. .+++.||||++.... ....+.+|+++++.++| ++|+.+..++...+..+|||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 3568899999999999999994 679999999987554 23468899999999976 5566666667778889999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee---cCCCCCeeccCCCcccCCCCC-
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF---DQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~~- 207 (488)
+ +++|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||+ +.++.+||+|||+++......
T Consensus 85 ~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 85 L-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred C-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9 8999999964 3457999999999999999999999999 9999999999999 688999999999998654322
Q ss_pred ----------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC---CCC
Q 011349 208 ----------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE---GHF 274 (488)
Q Consensus 208 ----------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~ 274 (488)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+..+...... ...
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~~~~~l 240 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVATSIEAL 240 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH-HHHHHHHHHHHHSCHHHH
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH-HHHHHHhhccccccHHHH
Confidence 457899999999999999999999999999999999999998653211000 000000000000 011
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
...++.++.+|+.+||+.+|++||++.+|++.|+.+....
T Consensus 241 ~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 241 CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 1234678999999999999999999999999998875543
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=349.70 Aligned_cols=248 Identities=17% Similarity=0.220 Sum_probs=197.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecC-----CeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~l 127 (488)
.|.+++.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.++.+++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 568899999999999999994 468889999997543222 35789999999999999999999998654 36899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
||||+. ++|.+++. ...+++.++..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 108 v~e~~~-~~L~~~l~---~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 108 VQDLME-TDLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EEECCS-EEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEcccC-cCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 999997 69999885 356999999999999999999999999 999999999999999999999999999865432
Q ss_pred ------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc-------c--------
Q 011349 207 ------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------M-------- 264 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------~-------- 264 (488)
....||+.|+|||++.+ ..++.++|||||||++|+|+||+.||.............. .
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 24478999999998765 4589999999999999999999998865422111000000 0
Q ss_pred ----cccccc-CCC-----CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 265 ----LMDSCL-EGH-----FSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 265 ----~~~~~~-~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
...... ... .....++++.+|+.+||+.||.+|||+.++++|-
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 315 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 000000 000 1123467899999999999999999999999873
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=352.35 Aligned_cols=246 Identities=21% Similarity=0.241 Sum_probs=193.1
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCC------eeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE------ERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv 128 (488)
.|.+++.||+|+||.||+|....+..||+|++.... ....+|+.+++.++||||+++++++...+ ..++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 578889999999999999998776679999886543 22347999999999999999999986543 37899
Q ss_pred EecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCcccCCC
Q 011349 129 AEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~ 205 (488)
|||++++ +...+.. .....+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++....
T Consensus 117 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 117 LEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp EECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 9999864 4443321 13567999999999999999999999999 99999999999999 799999999999986543
Q ss_pred C---CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc--------------------
Q 011349 206 G---KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-------------------- 261 (488)
Q Consensus 206 ~---~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-------------------- 261 (488)
. ....+|+.|+|||.+.+. .++.++|||||||++|||++|+.||.+..........
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~ 274 (394)
T 4e7w_A 195 GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM 274 (394)
T ss_dssp TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence 2 356789999999999764 5899999999999999999999998765321110000
Q ss_pred ---cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 ---FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 ---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+...........++...++++.+|+.+||+.||.+|||+.++++|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000000000111233456789999999999999999999999997
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-44 Score=355.53 Aligned_cols=250 Identities=16% Similarity=0.210 Sum_probs=200.9
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC--------CCCCccccccee----
Q 011349 54 CADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR--------SERLVNLIGCCC---- 120 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~---- 120 (488)
..|.+++.||+|+||.||+|. ..+++.||||+++... ...+.+.+|+.+++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 457899999999999999999 4568899999997542 23467899999999996 788999999987
Q ss_pred cCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCC---------
Q 011349 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDG--------- 190 (488)
Q Consensus 121 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~--------- 190 (488)
.....++||||+ +++|.+.+.......+++..++.++.||+.||.|||++ + |+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhh
Confidence 556899999999 57777777654556799999999999999999999998 8 99999999999998775
Q ss_pred ----------------------------------------CCeeccCCCcccCCCC-CccccccCCCCccccccCCcccC
Q 011349 191 ----------------------------------------NPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPE 229 (488)
Q Consensus 191 ----------------------------------------~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~ 229 (488)
.+||+|||+++..... ....||+.|+|||++.+..++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcH
Confidence 8999999999865443 34578999999999999899999
Q ss_pred CceEeehHHHHHHhhCCCCCCcchhhhh-------------hcc---------ccc-cccc------cc-----------
Q 011349 230 SVVYSFGTLLLDLLSGKHIPPSHALDLI-------------RGK---------NFL-MLMD------SC----------- 269 (488)
Q Consensus 230 sDv~slG~il~el~tg~~p~~~~~~~~~-------------~~~---------~~~-~~~~------~~----------- 269 (488)
+|||||||++|||+||+.||........ ... ... .... ..
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV 353 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHh
Confidence 9999999999999999998864321000 000 000 0000 00
Q ss_pred --cCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 270 --LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 270 --~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.....+...+..+.+|+.+||+.||++|||+.++++|
T Consensus 354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0112355677889999999999999999999999986
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=342.04 Aligned_cols=250 Identities=16% Similarity=0.180 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCceEEEEEe--CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC------CcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV--DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER------LVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~ 125 (488)
+.|.+++.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+.+++.++|+| ++++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4678899999999999999985 368899999997532 23467889999999997765 89999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-----------------
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ----------------- 188 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~----------------- 188 (488)
++||||+ +++|.+++......++++..+..++.||+.||.|||+++ |+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999999 799999997655567999999999999999999999999 999999999999987
Q ss_pred --CCCCeeccCCCcccCCCC-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc----
Q 011349 189 --DGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN---- 261 (488)
Q Consensus 189 --~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~---- 261 (488)
++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||..||............
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 250 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 250 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 678999999999865443 3567899999999999989999999999999999999999998754221110000
Q ss_pred --c-ccc------------------------------ccc-ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 --F-LML------------------------------MDS-CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 --~-~~~------------------------------~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. ... ... ......+...++.+.+|+.+||+.||.+|||+.++++|
T Consensus 251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 0 000 000 00011233457889999999999999999999999987
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-43 Score=337.25 Aligned_cols=245 Identities=20% Similarity=0.253 Sum_probs=193.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec------------
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE------------ 121 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------------ 121 (488)
.|.+++.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 357888999999999999995 578999999996432 234678999999999999999999998754
Q ss_pred -CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCc
Q 011349 122 -GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200 (488)
Q Consensus 122 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 200 (488)
....++||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcch
Confidence 3568999999999999999974 3456889999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCC------------------CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc
Q 011349 201 KNSRDG------------------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261 (488)
Q Consensus 201 ~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~ 261 (488)
...... ....||+.|+|||.+.+. .++.++|||||||++|||++ |+............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~ 240 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHh
Confidence 865421 234578999999999864 68999999999999999998 33322111000000
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+. .........++...+..+.+++.+||+.||.+|||+.+++++
T Consensus 241 ~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 241 LR-SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HH-STTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cc-ccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 00 011122334455667889999999999999999999999987
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=343.86 Aligned_cols=249 Identities=14% Similarity=0.123 Sum_probs=174.7
Q ss_pred cccccc-cCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec----CCeeeEE
Q 011349 55 ADNIVS-EHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLLV 128 (488)
Q Consensus 55 ~~~~~~-~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 128 (488)
.|.+++ .||+|+||.||+|... +|+.||||++... ..........++.+.||||+++++++.. ....++|
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 346655 4899999999999954 6999999999643 2222233334566689999999999876 4458999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCCC
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~ 205 (488)
|||++||+|.+++.......+++.+++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 99999999999998655567999999999999999999999999 999999999999975 45699999999986543
Q ss_pred C--CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc--ccCCCCChhhHHH
Q 011349 206 G--KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS--CLEGHFSNDDGTE 281 (488)
Q Consensus 206 ~--~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 281 (488)
. ....+|+.|+|||++.+..++.++|||||||++|+|++|..||................... ..........+.+
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED 263 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHH
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHH
Confidence 3 34567999999999988889999999999999999999999886543322211111111111 1111122345788
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
+.+|+.+||+.||.+|||+.++++|-.
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~ell~hp~ 290 (336)
T 3fhr_A 264 AKQLIRLLLKTDPTERLTITQFMNHPW 290 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 999999999999999999999999743
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-43 Score=339.84 Aligned_cols=253 Identities=18% Similarity=0.206 Sum_probs=182.0
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHH-HHhhcCCCCCcccccceecCCeeeEEE
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEAR-AVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
...+.+++.||+|+||.||+|.. .+|+.||||+++..... ....+..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 35667889999999999999995 46899999999765422 2345666666 677789999999999999999999999
Q ss_pred ecCCCCChhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 130 EFMPNETLSKHLFH---WENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 130 e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
||++ ++|.+++.. .....+++..+..++.|++.||.|||+. + ++||||||+||+++.++.+||+|||+++....
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9998 588777752 2356799999999999999999999998 8 99999999999999999999999999986644
Q ss_pred CC---ccccccCCCCcccc----ccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 206 GK---SYSTNLAFTPPEYL----RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 206 ~~---~~~~t~~y~aPE~~----~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
.. ...||+.|+|||.+ .+..++.++|||||||++|+|++|+.||.............................
T Consensus 179 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3aln_A 179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREF 258 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCC
T ss_pred ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccC
Confidence 32 33689999999998 456789999999999999999999998865321111011111101111111222345
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
++.+.+|+.+||..||.+|||+.+++++-
T Consensus 259 ~~~l~~li~~~l~~dp~~Rps~~ell~hp 287 (327)
T 3aln_A 259 SPSFINFVNLCLTKDESKRPKYKELLKHP 287 (327)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHHhCh
Confidence 78899999999999999999999999863
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=340.94 Aligned_cols=248 Identities=16% Similarity=0.195 Sum_probs=192.5
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccccccee------------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC------------ 120 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~------------ 120 (488)
+.|.+++.||+|+||.||+|... +++.||||++........+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 45788999999999999999954 58999999998665444567999999999999999999998763
Q ss_pred --cCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccC
Q 011349 121 --EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCF 197 (488)
Q Consensus 121 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Df 197 (488)
.....++||||++ |+|.+++. ..++++..+..++.||+.||.|||+.+ |+||||||+||+++ +++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccC
Confidence 3467899999997 69999984 467999999999999999999999999 99999999999997 5679999999
Q ss_pred CCcccCCCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc------
Q 011349 198 GLMKNSRDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL------ 263 (488)
Q Consensus 198 gla~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~------ 263 (488)
|+++..... ....+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||..............
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 999865422 23456889999998865 6789999999999999999999998865432111000000
Q ss_pred -----c---c----cccccC-C-----CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 -----M---L----MDSCLE-G-----HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 -----~---~----~~~~~~-~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
. . +..... . ......+.++.+++.+||+.||.+|||+.++++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0 0 000000 0 0112356789999999999999999999999987
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=338.23 Aligned_cols=251 Identities=21% Similarity=0.235 Sum_probs=201.6
Q ss_pred CcccccccCCCCCCceEEEEEe--CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhc---CCCCCccccccee-----c
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV--DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLL---RSERLVNLIGCCC-----E 121 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~-----~ 121 (488)
..|.+++.||+|+||.||+|.. .+|+.||||+++.... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 3468889999999999999996 4688999999875332 2234677888888877 8999999999987 4
Q ss_pred CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 122 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
....++||||+. |+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 567899999997 69999997655566999999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------ccc---
Q 011349 202 NSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------FLM--- 264 (488)
Q Consensus 202 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------~~~--- 264 (488)
..... ....+|+.|+|||.+.+..++.++|||||||++|+|+||+.||............ +..
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence 65432 3456799999999999889999999999999999999999988654321110000 000
Q ss_pred ----ccc---cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 265 ----LMD---SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 265 ----~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
... ......+....+..+.+|+.+||..||.+|||+.++++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 000011223457889999999999999999999999986
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-43 Score=369.34 Aligned_cols=252 Identities=21% Similarity=0.261 Sum_probs=205.7
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
..+.+.+.||+|+||.||+|.+.. +..||||+++...... .+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 346778889999999999998532 4579999987643222 357999999999999999999999984 5678999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 469 MELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp EECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999999964 3456999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ----ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 208 ----SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 208 ----~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
...+|+.|+|||.+.+..++.++|||||||++|||++ |..||.+....... ..+........+..+++.+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l 621 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI-----GRIENGERLPMPPNCPPTL 621 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-----HHHHHTCCCCCCTTCCHHH
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHH-----HHHHcCCCCCCCccccHHH
Confidence 2345678999999998899999999999999999997 88777654222111 1111112233455677899
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987643
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=336.93 Aligned_cols=246 Identities=20% Similarity=0.269 Sum_probs=199.0
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcC--CCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLR--SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.+++.||+|+||.||+|...+++.||||++...... ..+.+.+|+.++.+++ ||||+++++++...+..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 356888999999999999999888999999999765432 2457899999999997 599999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
|+ .+++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||+++ +.+||+|||+++.....
T Consensus 108 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp CC-CSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred ec-CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 94 57999999973 457999999999999999999999999 999999999999974 89999999999865432
Q ss_pred ---CccccccCCCCcccccc-----------CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC
Q 011349 207 ---KSYSTNLAFTPPEYLRT-----------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~-----------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........ ............
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~ 259 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEI 259 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCC
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---HHHHHHhccccc
Confidence 23467999999999875 4688899999999999999999998864321111 111222222233
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.++...+..+.+++.+||+.||.+|||+.+++++-
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 34445567899999999999999999999999874
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=343.96 Aligned_cols=246 Identities=15% Similarity=0.202 Sum_probs=195.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCee------
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEER------ 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~------ 125 (488)
.|.+++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 567888999999999999994 568999999997654222 35788999999999999999999999876654
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
++||||+. ++|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 123 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp EEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred EEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 99999997 68888773 34999999999999999999999999 99999999999999999999999999986654
Q ss_pred C-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc--------------------
Q 011349 206 G-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------------------- 263 (488)
Q Consensus 206 ~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------------------- 263 (488)
. ....+|+.|+|||.+.+ ..++.++|||||||++|+|+||+.||..............
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
T 4exu_A 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 276 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHH
T ss_pred CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhh
Confidence 3 34578999999999987 6789999999999999999999999875422111000000
Q ss_pred --cccccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 --MLMDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 --~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
..+....... .....++.+.+|+.+||+.||.+|||+.++++|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 277 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000000 112346789999999999999999999999988
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=347.42 Aligned_cols=245 Identities=14% Similarity=0.203 Sum_probs=180.4
Q ss_pred ccCCCCCCceEEEEEeC---CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCccccccee--cCCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC--EGEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~~~ 134 (488)
++||+|+||.||+|.+. +++.||||++.... ....+.+|+.+|++++||||+++++++. .....++||||+.
T Consensus 27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp CCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 46999999999999964 57889999997543 3457899999999999999999999995 4678999999997
Q ss_pred CChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee----cCCCCCeeccCCCcccC
Q 011349 135 ETLSKHLFHW-------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF----DQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 135 gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~ 203 (488)
++|.+++... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 182 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence 6888877521 2235999999999999999999999999 9999999999999 67889999999999865
Q ss_pred CCC-------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc---------------
Q 011349 204 RDG-------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------------- 260 (488)
Q Consensus 204 ~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------------- 260 (488)
... ....||+.|+|||++.+ ..++.++|||||||++|||+||++||...........
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g 262 (405)
T 3rgf_A 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262 (405)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHC
T ss_pred CCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhC
Confidence 432 24578999999999987 4589999999999999999999998864322100000
Q ss_pred -----ccccc------------c-ccccCC--------CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 261 -----NFLML------------M-DSCLEG--------HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 261 -----~~~~~------------~-~~~~~~--------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
.+..+ + ...... ......+..+.+|+.+||..||.+|||+.++++|-.
T Consensus 263 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~ 336 (405)
T 3rgf_A 263 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY 336 (405)
T ss_dssp CCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred CCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 00000 0 000000 000011467889999999999999999999999843
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-43 Score=345.37 Aligned_cols=251 Identities=16% Similarity=0.206 Sum_probs=201.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-----------CCCCcccccceec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-----------SERLVNLIGCCCE 121 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~~ 121 (488)
..|.+++.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 4578899999999999999994 578999999997533 23467889999999886 8999999999876
Q ss_pred CC----eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeec------CCC
Q 011349 122 GE----ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFD------QDG 190 (488)
Q Consensus 122 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~------~~~ 190 (488)
.+ ..++||||+ +++|.+++.......+++..+..++.||+.||.|||++ + |+||||||+|||++ ..+
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcc
Confidence 54 789999999 89999999765566799999999999999999999998 8 99999999999994 445
Q ss_pred CCeeccCCCcccCCCC-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-----cc---
Q 011349 191 NPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-----KN--- 261 (488)
Q Consensus 191 ~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-----~~--- 261 (488)
.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||..||.......... ..
T Consensus 176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255 (373)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred eEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence 7999999999866543 35578999999999999899999999999999999999999886432110000 00
Q ss_pred ------------------------ccccccc----------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 262 ------------------------FLMLMDS----------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 262 ------------------------~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
....+.. .....++...+.++.+|+.+||+.||.+|||+.++++|-
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 335 (373)
T 1q8y_A 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHP 335 (373)
T ss_dssp HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhCh
Confidence 0000000 001234567788999999999999999999999999973
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=342.02 Aligned_cols=250 Identities=18% Similarity=0.191 Sum_probs=186.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCe-------e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEE-------R 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-------~ 125 (488)
+.|.+++.||+|+||.||+|.. .+|+.||||++.... .....+.++++.+..++||||+++++++...+. .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 101 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL 101 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence 3458888999999999999995 568999999986543 334567788999999999999999999865433 7
Q ss_pred eEEEecCCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcccccccCCceeecC-CCCCeeccCCCc
Q 011349 126 LLVAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCS--SKGRALYHDLNTYRILFDQ-DGNPRLSCFGLM 200 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla 200 (488)
++||||+++ +|...+.. .....+++..+..++.||+.||.||| +.+ |+||||||+|||++. ++.+||+|||++
T Consensus 102 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a 179 (360)
T 3e3p_A 102 NVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSA 179 (360)
T ss_dssp EEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCc
Confidence 899999985 55544432 24567999999999999999999999 888 999999999999996 899999999999
Q ss_pred ccCCCC---CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc-------cc---c
Q 011349 201 KNSRDG---KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL-------ML---M 266 (488)
Q Consensus 201 ~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------~~---~ 266 (488)
+..... ....||+.|+|||++.+. .++.++|||||||++|||+||+.||.............. .. +
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 180 KKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp BCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred eecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhc
Confidence 876543 245679999999998764 489999999999999999999998875432211100000 00 0
Q ss_pred -------c---------cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 267 -------D---------SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 267 -------~---------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+ .......+...++++.+|+.+||+.||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 000111223357889999999999999999999999987
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=340.75 Aligned_cols=248 Identities=17% Similarity=0.208 Sum_probs=197.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecC-----Ceee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 126 (488)
+.+.+++.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.++++++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 3568889999999999999995 46899999999754322 234688999999999999999999987654 6789
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+. ++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 91 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 9999997 699998853 56999999999999999999999999 999999999999999999999999999865421
Q ss_pred --------------CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------
Q 011349 207 --------------KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK----------- 260 (488)
Q Consensus 207 --------------~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~----------- 260 (488)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 12467899999998765 6789999999999999999999998876432110000
Q ss_pred -cc--------cccccccc---CC---CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 261 -NF--------LMLMDSCL---EG---HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 261 -~~--------~~~~~~~~---~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ...+.... .. ......++++.+|+.+||+.||++|||+.++++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 00000000 00 0112456789999999999999999999999987
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-42 Score=337.47 Aligned_cols=247 Identities=15% Similarity=0.207 Sum_probs=196.1
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCCe------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGEE------ 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 124 (488)
..|.+.+.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 3567888899999999999995 568999999997654222 3578899999999999999999999977654
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+. ++|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 68988873 34999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc---------------------
Q 011349 205 DG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------------------- 261 (488)
Q Consensus 205 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--------------------- 261 (488)
.. ....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||............
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 43 34578999999999887 67899999999999999999999988654221100000
Q ss_pred -cccccccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 -FLMLMDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 -~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
....+..... .......++.+.+|+.+||..||.+|||+.++++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000001 11223557889999999999999999999999987
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=331.93 Aligned_cols=244 Identities=18% Similarity=0.183 Sum_probs=200.9
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCC--CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.|.+++.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 23 ~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 102 (287)
T 2wei_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (287)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEc
Confidence 4688899999999999999954 68999999986543 23467899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC---CCCeeccCCCcccCCCCC-
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD---GNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~~- 207 (488)
+++++|.+.+.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.+ +.+||+|||++.......
T Consensus 103 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~ 179 (287)
T 2wei_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (287)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence 999999998863 356999999999999999999999999 9999999999999754 479999999988655432
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCC--ChhhHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF--SNDDGTELV 283 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 283 (488)
...+|+.|+|||.+.+ .++.++||||||+++|+|++|..||........... +......... ....+.++.
T Consensus 180 ~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 254 (287)
T 2wei_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR----VETGKYAFDLPQWRTISDDAK 254 (287)
T ss_dssp CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHCCCCCCSGGGTTSCHHHH
T ss_pred cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH----HHcCCCCCCchhhhhcCHHHH
Confidence 3457899999999875 589999999999999999999998865432221110 0000000011 123467899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+||..||.+|||+.+++++
T Consensus 255 ~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 255 DLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHcccChhhCcCHHHHhcC
Confidence 99999999999999999999986
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=342.84 Aligned_cols=196 Identities=19% Similarity=0.180 Sum_probs=169.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CC-----CCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SE-----RLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~~~ 126 (488)
+.|.+++.||+|+||.||+|.. .+++.||||+++... .....+.+|+.+++.++ |+ +|+++++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 4568889999999999999995 468899999997432 22456788999999885 55 3999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCcccccccCCceeec--CCCCCeeccCCCccc
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS--KGRALYHDLNTYRILFD--QDGNPRLSCFGLMKN 202 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~ 202 (488)
+||||+. ++|.+++.......+++..+..++.||+.||.|||+ .+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 133 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 9999996 699999976555679999999999999999999995 56 99999999999994 578899999999987
Q ss_pred CCCC-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcc
Q 011349 203 SRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSH 252 (488)
Q Consensus 203 ~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~ 252 (488)
.... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6543 4567899999999999999999999999999999999999998754
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-43 Score=338.27 Aligned_cols=240 Identities=20% Similarity=0.295 Sum_probs=202.1
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcC--CCCCcccccceecC
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLR--SERLVNLIGCCCEG 122 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~ 122 (488)
-.+.|.+++.||+|+||.||+|. ..+++.||||++...... ....+.+|+.++++++ |+||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 34567899999999999999999 457899999999765322 2346788999999996 59999999999999
Q ss_pred CeeeEEEecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCc
Q 011349 123 EERLLVAEFMPN-ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLM 200 (488)
Q Consensus 123 ~~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla 200 (488)
+..++|||++.+ ++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++ +++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999976 899999873 467999999999999999999999999 99999999999999 7899999999999
Q ss_pred ccCCCC--CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 201 KNSRDG--KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 201 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
+..... ....||+.|+|||++.+..+ +.++|||||||++|||+||+.||....... .. ...++..
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~-----------~~~~~~~ 265 (320)
T 3a99_A 198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-RG-----------QVFFRQR 265 (320)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH-HC-----------CCCCSSC
T ss_pred cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh-cc-----------ccccccc
Confidence 876543 34568999999999987665 788999999999999999998886542111 11 0112334
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.++++.+++.+||+.||.+|||+.+++++
T Consensus 266 ~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 266 VSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 56789999999999999999999999986
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=335.53 Aligned_cols=239 Identities=21% Similarity=0.288 Sum_probs=195.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhc----CCCCCcccccceecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLL----RSERLVNLIGCCCEG 122 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~~~~~~~~~ 122 (488)
+.|.+++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++.++ +||||+++++++...
T Consensus 31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 3468889999999999999984 57889999999765432 233567899999999 899999999999999
Q ss_pred CeeeEEEec-CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec-CCCCCeeccCCCc
Q 011349 123 EERLLVAEF-MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLM 200 (488)
Q Consensus 123 ~~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla 200 (488)
+..++|||+ +.+++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||+++ .++.+||+|||++
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred CeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 999999999 789999999974 456999999999999999999999999 99999999999999 8899999999999
Q ss_pred ccCCCC--CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 201 KNSRDG--KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 201 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
+..... ....+|+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....++..
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------~~~~~~~~ 255 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE------------AELHFPAH 255 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH------------TCCCCCTT
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhh------------hccCCccc
Confidence 866543 34568999999999987665 4589999999999999999988765321110 01123345
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
.+..+.+++.+||+.||++|||+.+++++-
T Consensus 256 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~~ 285 (312)
T 2iwi_A 256 VSPDCCALIRRCLAPKPSSRPSLEEILLDP 285 (312)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHHST
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 567899999999999999999999999874
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-42 Score=338.11 Aligned_cols=250 Identities=16% Similarity=0.139 Sum_probs=200.0
Q ss_pred CcccccccCCCCCCceEEEEEeC-CC-cEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC------CcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-ED-RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER------LVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~ 125 (488)
..|.+++.||+|+||.||+|... ++ +.||||+++... ...+.+.+|+.+++.++|++ ++.+++++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 35688999999999999999953 44 689999997532 23457889999999998766 88999999999999
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee-------------------
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF------------------- 186 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill------------------- 186 (488)
++||||+ +++|.+.+.......+++.++..++.||+.||.|||+.+ |+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccc
Confidence 9999999 577777776545567999999999999999999999999 9999999999999
Q ss_pred cCCCCCeeccCCCcccCCCC-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc--cc-
Q 011349 187 DQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--NF- 262 (488)
Q Consensus 187 ~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--~~- 262 (488)
+.++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||..||........... ..
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 255 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 56789999999999865443 356789999999999999999999999999999999999999865422110000 00
Q ss_pred cc----c------------------------------ccc-ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 LM----L------------------------------MDS-CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 ~~----~------------------------------~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. . ... ..........+.++.+|+.+||+.||++|||+.++++|
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 0 000 00001122346789999999999999999999999987
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=350.22 Aligned_cols=244 Identities=18% Similarity=0.112 Sum_probs=186.4
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCCCC
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
.+.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +|||||++++++.+++..++||||+. |
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 344678999999998776678999999998653 245688999999987 89999999999999999999999996 6
Q ss_pred ChhhhhccCCCCC-----CCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC-------------CCCeeccC
Q 011349 136 TLSKHLFHWENQP-----MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD-------------GNPRLSCF 197 (488)
Q Consensus 136 sL~~~l~~~~~~~-----l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~-------------~~~kl~Df 197 (488)
+|.+++....... .++..++.++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+||
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 9999997432111 123346789999999999999999 9999999999999754 47999999
Q ss_pred CCcccCCCCC--------ccccccCCCCcccccc-------CCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccc
Q 011349 198 GLMKNSRDGK--------SYSTNLAFTPPEYLRT-------GRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKN 261 (488)
Q Consensus 198 gla~~~~~~~--------~~~~t~~y~aPE~~~~-------~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~ 261 (488)
|+++...... ...||+.|+|||++.+ ..++.++|||||||++|||+| |..||......... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~--i 250 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN--I 250 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH--H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH--H
Confidence 9998765432 3468999999999975 568999999999999999999 88777543221110 0
Q ss_pred cccccc-cccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 262 FLMLMD-SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 262 ~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
...... ...........+.++.+++.+||+.||.+|||+.++++|-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 251 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp HHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred hcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence 000000 0111122345678999999999999999999999999863
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-42 Score=356.12 Aligned_cols=251 Identities=17% Similarity=0.171 Sum_probs=197.4
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceec------CCe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCE------GEE 124 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~ 124 (488)
++.|.+++.||+|+||.||+|.. .+|+.||||+++.... ...+.+.+|+.++++++||||+++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 45678999999999999999995 5689999999976432 224578999999999999999999998765 667
Q ss_pred eeEEEecCCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCC---CeeccCCCc
Q 011349 125 RLLVAEFMPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN---PRLSCFGLM 200 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla 200 (488)
.++||||++||+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 899999999999999997532 236999999999999999999999999 999999999999997665 899999999
Q ss_pred ccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh--------------ccccc
Q 011349 201 KNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR--------------GKNFL 263 (488)
Q Consensus 201 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~--------------~~~~~ 263 (488)
...... ....||+.|+|||.+.+..++.++|||||||++|+|+||..||........- .....
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 251 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLT 251 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCS
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhc
Confidence 876543 3457899999999999999999999999999999999999988653111100 00000
Q ss_pred cc--ccc--ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHH
Q 011349 264 ML--MDS--CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304 (488)
Q Consensus 264 ~~--~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il 304 (488)
.. ... ......+...++.+.+++.+||..||++|||+.+++
T Consensus 252 g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 252 GAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp SSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred cccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 00 000 112234556789999999999999999999998743
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=329.43 Aligned_cols=250 Identities=19% Similarity=0.232 Sum_probs=181.9
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-h-HHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-S-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.++.+.+++.||+|+||.||+|.. .+|+.||||++....... . +.+..+..+++.++||||+++++++..++..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 345678889999999999999995 468999999997654222 2 2344555567888999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 206 (488)
|||+ ++.+..+... ....+++..+..++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++......
T Consensus 103 ~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 103 MELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp ECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred Eecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 9999 5566555432 356799999999999999999999995 8 999999999999999999999999999765432
Q ss_pred --CccccccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 207 --KSYSTNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
....+|+.|+|||.+. +..++.++|||||||++|||++|+.||.................... .......+
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 257 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL--LPGHMGFS 257 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC--CCSSSCCC
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC--CCccCCCC
Confidence 2446899999999994 45688899999999999999999988865321110000000000000 01112356
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.++.+++.+||+.||.+|||+.+++++
T Consensus 258 ~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 258 GDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 789999999999999999999999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=342.04 Aligned_cols=243 Identities=16% Similarity=0.107 Sum_probs=186.2
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.+.+.+.||+|+||+||.....+++.||||++.... ...+.+|+.+|+.+ +|||||++++++.+....++||||+.
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 356677889999999765556688999999997543 34467899999999 79999999999999999999999996
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---C--CCCeeccCCCcccCCCC--
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---D--GNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~--~~~kl~Dfgla~~~~~~-- 206 (488)
|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. + ..+||+|||+++.....
T Consensus 102 -g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 102 -ATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp -EEHHHHHHS-SSCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred -CCHHHHHHh-cCCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 699999975 3334566677899999999999999999 999999999999943 2 35779999999865432
Q ss_pred -----CccccccCCCCccccc---cCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 207 -----KSYSTNLAFTPPEYLR---TGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 207 -----~~~~~t~~y~aPE~~~---~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
....||+.|+|||++. +..++.++|||||||++|||+| |..||........... ... .. .........
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~-~~~-~~-~~~~~~~~~ 255 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL-LGA-CS-LDCLHPEKH 255 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH-TTC-CC-CTTSCTTCH
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH-hcc-CC-ccccCcccc
Confidence 2356899999999997 3567889999999999999999 7766643322111100 000 00 000111234
Q ss_pred hHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+..+.+|+.+||+.||.+|||+.++++|
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 56778999999999999999999999976
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-41 Score=320.36 Aligned_cols=231 Identities=16% Similarity=0.131 Sum_probs=185.4
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
..|.+++.||+|+||.||+|... +++.||||++....... .+.+.+|+.++.+++||||+++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 34788899999999999999954 58999999998765433 257899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY 209 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~ 209 (488)
||++|++|.+++. .+ ....++..|+.||+.||.|||++| |+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~---~~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVAD---TS-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp ECCCEEEHHHHHT---TC-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred EecCCCCHHHHHh---cC-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 9999999999994 23 456678999999999999999999 9999999999999999999998554
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC--CCCChhhHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE--GHFSNDDGTELVRLAS 287 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~ 287 (488)
|++ .++.++|||||||++|||+||+.||.......... ........... ......+++++.+++.
T Consensus 175 -----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 241 (286)
T 3uqc_A 175 -----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-PAERDTAGQPIEPADIDRDIPFQISAVAA 241 (286)
T ss_dssp -----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE-ECCBCTTSCBCCHHHHCTTSCHHHHHHHH
T ss_pred -----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH-HHHHHhccCCCChhhcccCCCHHHHHHHH
Confidence 333 36889999999999999999999887542211000 00000000000 0122345688999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+||+.||.+| |+.++++.|+.+....
T Consensus 242 ~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 242 RSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HHcccCCccC-CHHHHHHHHHHHhccC
Confidence 9999999999 9999999999887654
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=319.98 Aligned_cols=228 Identities=15% Similarity=0.131 Sum_probs=182.3
Q ss_pred ccccc-ccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHH-hhcCCCCCcccccceec----CCeeeE
Q 011349 55 ADNIV-SEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAV-GLLRSERLVNLIGCCCE----GEERLL 127 (488)
Q Consensus 55 ~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~----~~~~~l 127 (488)
.|.++ +.||+|+||.||+|.. .+++.||||+++. ...+.+|+.++ +.++||||+++++++.. ....++
T Consensus 18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 34566 5699999999999995 5789999999863 35688999998 44589999999999876 677899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSR 204 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~ 204 (488)
||||++||+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 999999999999998655567999999999999999999999999 999999999999997 7899999999986432
Q ss_pred CCCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC----hhhHH
Q 011349 205 DGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS----NDDGT 280 (488)
Q Consensus 205 ~~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 280 (488)
+..++.++|||||||++|||+||..||.................... ...+ ...++
T Consensus 172 ------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (299)
T 3m2w_A 172 ------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEWSEVSE 231 (299)
T ss_dssp ------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTC--CSSCHHHHTTSCH
T ss_pred ------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcc--ccCCchhcccCCH
Confidence 24578899999999999999999998865432221111111111110 1112 23568
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
++.+++.+||+.||.+|||+.++++|-.
T Consensus 232 ~~~~li~~~l~~dP~~Rps~~e~l~hp~ 259 (299)
T 3m2w_A 232 EVKMLIRNLLKTEPTQRMTITEFMNHPW 259 (299)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHHHHHHcccChhhCCCHHHHhcChh
Confidence 8999999999999999999999998743
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-41 Score=328.12 Aligned_cols=241 Identities=12% Similarity=0.036 Sum_probs=186.2
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--------CChHHHHHHHHHHhhcC-----------------
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--------PDSRQFLEEARAVGLLR----------------- 108 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~----------------- 108 (488)
..|.+++.||+|+||.||+|+. +|+.||||++..... ...+.+.+|+.+++.++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 3467889999999999999997 789999999986532 22377899999999986
Q ss_pred ---------CCCCcccccceec-------------CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 011349 109 ---------SERLVNLIGCCCE-------------GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALD 166 (488)
Q Consensus 109 ---------h~niv~~~~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~ 166 (488)
||||+++++++.+ .+..++||||+++|++.+.+. ...+++..+..|+.||+.||.
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHHH
Confidence 5555555555554 678999999999998777773 356899999999999999999
Q ss_pred HHH-hCCCcccccccCCceeecCCC--------------------CCeeccCCCcccCCCCCccccccCCCCccccccCC
Q 011349 167 YCS-SKGRALYHDLNTYRILFDQDG--------------------NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGR 225 (488)
Q Consensus 167 ~LH-~~~~iiH~Dlkp~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~~~ 225 (488)
||| +.+ |+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.+..
T Consensus 176 ~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~~ 253 (336)
T 2vuw_A 176 VAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGDG 253 (336)
T ss_dssp HHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCCS
T ss_pred HHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCCC
Confidence 999 899 99999999999999887 8999999999876543 458899999999998766
Q ss_pred cccCCceEeehHH-HHHHhhCCCCCCcchhhhhhccccc-c-ccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHH
Q 011349 226 VIPESVVYSFGTL-LLDLLSGKHIPPSHALDLIRGKNFL-M-LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKS 302 (488)
Q Consensus 226 ~~~~sDv~slG~i-l~el~tg~~p~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ 302 (488)
+.++||||||++ .+++++|..|+....+......... . ..............++++.+|+.+||+.| |+.+
T Consensus 254 -~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e 327 (336)
T 2vuw_A 254 -DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATD 327 (336)
T ss_dssp -SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHH
T ss_pred -ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHH
Confidence 889999998777 7778889887654211000000000 0 00111111123357889999999999976 9999
Q ss_pred HH-HH
Q 011349 303 LV-AS 306 (488)
Q Consensus 303 il-~~ 306 (488)
++ +|
T Consensus 328 ~l~~H 332 (336)
T 2vuw_A 328 LLCQH 332 (336)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 98 65
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=331.30 Aligned_cols=238 Identities=15% Similarity=0.103 Sum_probs=182.6
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC---ChHHHHHHHHHHhhcCC-CCCcccccc------------
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP---DSRQFLEEARAVGLLRS-ERLVNLIGC------------ 118 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h-~niv~~~~~------------ 118 (488)
+.+.+.||+|+||.||+|. ..+|+.||||+++..... ..+.+.+|+.+++.++| +|...+..+
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 4456779999999999999 557999999999844322 25689999999999987 332222111
Q ss_pred ---------eec-----CCeeeEEEecCCCCChhhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc
Q 011349 119 ---------CCE-----GEERLLVAEFMPNETLSKHLF-----HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179 (488)
Q Consensus 119 ---------~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dl 179 (488)
+.. ....+++|+++ +++|.+++. ......+++..++.++.||+.||.|||+++ |+||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrDi 237 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYL 237 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCC
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCc
Confidence 111 12357778877 589999884 223456889999999999999999999999 999999
Q ss_pred cCCceeecCCCCCeeccCCCcccCCCC-CccccccCCCCcccc----------ccCCcccCCceEeehHHHHHHhhCCCC
Q 011349 180 NTYRILFDQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYL----------RTGRVIPESVVYSFGTLLLDLLSGKHI 248 (488)
Q Consensus 180 kp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~sDv~slG~il~el~tg~~p 248 (488)
||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||+||+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998865443 34466 999999999 555688899999999999999999998
Q ss_pred CCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 249 PPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
|....... .....+.. ....++.+.+|+.+||+.||++|||+.+++++
T Consensus 317 f~~~~~~~----~~~~~~~~------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 317 NTDDAALG----GSEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp CCTTGGGS----CSGGGGSS------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCcchhh----hHHHHHhh------cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 86542211 11111111 11345789999999999999999998888665
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=298.50 Aligned_cols=180 Identities=13% Similarity=0.048 Sum_probs=130.7
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC----------ChHHHHHHHHHHhhc-CCCCCcccccceecCCeeeEE
Q 011349 61 EHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP----------DSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 128 (488)
..+.|++|.+..++ +..|+.||||++...... +.++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45677777777766 557889999999765321 134699999999999 699999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||++|++|.++|. .+++++.. .|+.||+.||.|+|++| ||||||||+|||++.+|++||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 321 MEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp EECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred EecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 99999999999997 45667765 47899999999999999 9999999999999999999999999998765432
Q ss_pred ---ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCC
Q 011349 208 ---SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH 247 (488)
Q Consensus 208 ---~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~ 247 (488)
+..||+.|||||++.+ .+..++|+||+|++++++.++..
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 4578999999999975 56778999999999888776643
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-29 Score=255.20 Aligned_cols=175 Identities=13% Similarity=0.097 Sum_probs=143.4
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCC--------hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 60 SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD--------SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.||+|+||.||+|.. .+..+++|+........ .+.+.+|++++++++||||+++..++...+..++||||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~ 420 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY 420 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence 4679999999999954 57779999875533221 23489999999999999999776666677888999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----- 206 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 206 (488)
++|++|.+++.. +..++.||+.||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 999999999952 5689999999999999999 999999999999998 9999999999987653
Q ss_pred ------CccccccCCCCcccccc--CCcccCCceEeehHHHHHHhhCCCC
Q 011349 207 ------KSYSTNLAFTPPEYLRT--GRVIPESVVYSFGTLLLDLLSGKHI 248 (488)
Q Consensus 207 ------~~~~~t~~y~aPE~~~~--~~~~~~sDv~slG~il~el~tg~~p 248 (488)
....||+.|||||++.+ ..|+..+|+|+..+-..+.+.++.+
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 24578999999999987 5688889999999888887776644
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-26 Score=217.35 Aligned_cols=155 Identities=16% Similarity=0.087 Sum_probs=123.8
Q ss_pred HHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC------------------ChHHHHHHHHHHhh
Q 011349 45 QLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP------------------DSRQFLEEARAVGL 106 (488)
Q Consensus 45 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~ 106 (488)
.+....+.-..+.+.+.||+|+||.||+|...+|+.||||+++..... ....+.+|+.+|++
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 344444555556677899999999999999977999999999754321 23468999999999
Q ss_pred cCCCCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceee
Q 011349 107 LRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186 (488)
Q Consensus 107 l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill 186 (488)
++ | +++.+++. .+..++||||++|++|.+ +. . .....++.||+.||.|||+.+ |+||||||+|||+
T Consensus 161 l~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl 226 (282)
T 1zar_A 161 LQ--G-LAVPKVYA-WEGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLV 226 (282)
T ss_dssp TT--T-SSSCCEEE-EETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEE
T ss_pred cc--C-CCcCeEEe-ccceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEE
Confidence 99 5 77777553 466799999999999998 52 1 234579999999999999999 9999999999999
Q ss_pred cCCCCCeeccCCCcccCCCCCccccccCCCCcccccc
Q 011349 187 DQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRT 223 (488)
Q Consensus 187 ~~~~~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~ 223 (488)
+ ++.+||+|||+++. +..++|||++..
T Consensus 227 ~-~~~vkl~DFG~a~~---------~~~~~a~e~l~r 253 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE---------VGEEGWREILER 253 (282)
T ss_dssp E-TTEEEECCCTTCEE---------TTSTTHHHHHHH
T ss_pred E-CCcEEEEECCCCeE---------CCCCCHHHHHHH
Confidence 9 99999999999863 345788998753
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-22 Score=185.55 Aligned_cols=149 Identities=13% Similarity=0.022 Sum_probs=113.9
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcE--EEEEEccCCCCCC------------------------hH
Q 011349 43 LDQLRAATSGFCADNIVSEHGEKAPNVVYKGLV-DEDRW--IAVKRFNRSAWPD------------------------SR 95 (488)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------~~ 95 (488)
...+....+.-..+.+.+.||+|+||.||+|.. .+|+. ||||+++...... ..
T Consensus 36 ~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 1zth_A 36 LKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFI 115 (258)
T ss_dssp HHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHH
T ss_pred HHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHH
Confidence 334444444444567888999999999999996 78999 9999976542110 12
Q ss_pred HHHHHHHHHhhcCCCCC--cccccceecCCeeeEEEecCCC-C----ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 011349 96 QFLEEARAVGLLRSERL--VNLIGCCCEGEERLLVAEFMPN-E----TLSKHLFHWENQPMKWAMRVRVALYLAQALDYC 168 (488)
Q Consensus 96 ~~~~E~~~l~~l~h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~L 168 (488)
.+.+|+.+|.++.|+++ +.++++ ...+|||||+.+ | +|.+.... .++..+..++.||+.||.||
T Consensus 116 ~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 116 WTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHH
Confidence 58899999999998864 344432 357899999942 3 66665431 33557789999999999999
Q ss_pred H-hCCCcccccccCCceeecCCCCCeeccCCCcccC
Q 011349 169 S-SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203 (488)
Q Consensus 169 H-~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 203 (488)
| +.+ |+||||||+|||++. .++|+|||++...
T Consensus 187 H~~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQEAE-LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHTSC-EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHCC-EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9 888 999999999999998 9999999999765
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-21 Score=158.25 Aligned_cols=105 Identities=19% Similarity=0.335 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+.+.+++++|+.+++.|+|++|++.|++||+++|+ ++.+|.++|.+|.++|++++|+.+|++||+++|+++.+|+++|.
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 56889999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|+++|++|++++|++.
T Consensus 90 ~~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 90 CLVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 99999999999999999999999864
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-20 Score=158.21 Aligned_cols=107 Identities=17% Similarity=0.115 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC------c-----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV------S-----PTVFARRCLCYLLSDMPQEALGDAMQAQVI- 447 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l- 447 (488)
+..+..++++|+.+++.|+|++|+..|++||+++|++ + +.+|+|+|.++.++|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 5678899999999999999999999999999999982 1 239999999999999999999999999999
Q ss_pred ------CCCCHHHH----HHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 448 ------SPDWPTAF----YLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 448 ------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|+++++| |++|.+|..+|++++|+++|++|++++|++.
T Consensus 88 n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 88 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 99999999 9999999999999999999999999999865
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5.7e-19 Score=150.47 Aligned_cols=105 Identities=9% Similarity=-0.059 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+++.+++.+|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|+|++|+.+|++|++++|+++.+|+++|
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg 111 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTG 111 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHH
Confidence 467889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+|..+|++++|+++|++|++++|+.
T Consensus 112 ~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 112 QCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 99999999999999999999999974
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.8e-19 Score=144.74 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC-------H
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW-------P 452 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~-------~ 452 (488)
.+.+.+++++|+.++++|+|++|++.|++||+++|+ ++.+|+++|.+|..+|+|++|+++|++||+++|++ +
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 366889999999999999999999999999999999 99999999999999999999999999999999877 4
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 453 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 453 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+|+++|.++..+|++++|+++|+++++++|+
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 68999999999999999999999999998876
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-19 Score=173.95 Aligned_cols=148 Identities=11% Similarity=0.081 Sum_probs=104.4
Q ss_pred HHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC--------------ChHHH--------HHHHH
Q 011349 45 QLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP--------------DSRQF--------LEEAR 102 (488)
Q Consensus 45 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~~~--------~~E~~ 102 (488)
-|....+.=.-|.+.++||.|+||.||+|...+|+.||||+++..... ..... .+|..
T Consensus 86 AL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~ 165 (397)
T 4gyi_A 86 ALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFA 165 (397)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 344555555568899999999999999999889999999997643110 01112 34555
Q ss_pred HHhhcCCCCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCC
Q 011349 103 AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTY 182 (488)
Q Consensus 103 ~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~ 182 (488)
.|.++.+.++....-+. ....+|||||++|++|..+.. . +....++.||+.+|.+||+.| ||||||||.
T Consensus 166 nL~rL~~~gv~vp~p~~--~~~~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH~~g-IVHrDLKp~ 234 (397)
T 4gyi_A 166 FMKALYEEGFPVPEPIA--QSRHTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLAKHG-LIHGDFNEF 234 (397)
T ss_dssp HHHHHHHTTCSCCCEEE--EETTEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHHHTT-EECSCCSTT
T ss_pred HHHHHHhcCCCCCeeee--ccCceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHHHCC-CcCCCCCHH
Confidence 55555433332111111 123479999999999876542 1 134568899999999999999 999999999
Q ss_pred ceeecCCCC----------CeeccCCCcccC
Q 011349 183 RILFDQDGN----------PRLSCFGLMKNS 203 (488)
Q Consensus 183 Nill~~~~~----------~kl~Dfgla~~~ 203 (488)
|||+++++. +.|+||+-+...
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 999987763 789999976543
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.4e-18 Score=148.72 Aligned_cols=108 Identities=19% Similarity=0.234 Sum_probs=101.7
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc------------------CCCCchHHHhcHHHHHHhhCCHHHHHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG------------------GTMVSPTVFARRCLCYLLSDMPQEALG 439 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------------------~p~~~~~~~~~~a~~~~~~~~~~~A~~ 439 (488)
+..+.+..+.++|+.+++.|+|++|+..|++||++ +|. ...+|+++|.||.++|+|++|+.
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~ 84 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEE 84 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHH
Confidence 34577899999999999999999999999999998 676 77899999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 440 DAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 440 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++++||+++|+++.+|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 85 ~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 85 TSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 99999999999999999999999999999999999999999999864
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=9e-18 Score=138.39 Aligned_cols=101 Identities=21% Similarity=0.294 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..++.+|..++..|+|++|+..|+++++++|+ ++.+|.++|.+|..+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45789999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~ 482 (488)
++..+|++++|++.|+++++++
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.1e-17 Score=139.56 Aligned_cols=106 Identities=12% Similarity=0.045 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+++..++.+|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 96 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAA 96 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 366789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++|++.|+++++++|+++
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 123 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQELIANXP 123 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 999999999999999999999998754
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.9e-17 Score=141.30 Aligned_cols=107 Identities=25% Similarity=0.364 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++..++.+|..++..|+|++|+..|+++++++|+ ++.+|+++|.+|..+|+|++|+.+|+++++++|+++.+|+++|
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 367889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccccC
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKHR 487 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~~ 487 (488)
.++..+|++++|+++|+++++++|++..
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGNGGS 114 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCchH
Confidence 9999999999999999999999998753
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-17 Score=141.57 Aligned_cols=106 Identities=13% Similarity=0.118 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+.+..++..|..+++.|+|++|++.|+++|+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|
T Consensus 28 p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 106 (150)
T 4ga2_A 28 RQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIA 106 (150)
T ss_dssp HHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 366778899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHH-HHHhhccccccc
Q 011349 460 AALFGLGMNNDAQET-LKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~-~~~al~l~p~~~ 486 (488)
.++..+|++++|.+. +++|++++|+++
T Consensus 107 ~~~~~~~~~~~aa~~~~~~al~l~P~~~ 134 (150)
T 4ga2_A 107 ELLCKNDVTDGRAKYWVERAAKLFPGSP 134 (150)
T ss_dssp HHHHHHCSSSSHHHHHHHHHHHHSTTCH
T ss_pred HHHHHcCChHHHHHHHHHHHHHhCcCCH
Confidence 999999999988876 599999999864
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.71 E-value=7.5e-17 Score=136.03 Aligned_cols=106 Identities=13% Similarity=0.093 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+++..++..|..+++.|+|++|+..|+++++.+|+ ++.+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 93 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAA 93 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHH
Confidence 356788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++|++.|+++++++|++.
T Consensus 94 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 120 (142)
T 2xcb_A 94 ECHLQLGDLDGAESGFYSARALAAAQP 120 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTCG
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999754
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.70 E-value=6.7e-17 Score=132.40 Aligned_cols=101 Identities=11% Similarity=0.028 Sum_probs=93.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 011349 385 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 464 (488)
Q Consensus 385 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 464 (488)
.++.+|..+++.|++++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..|++|++++|+++.+++.+|.++..
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhccccccc
Q 011349 465 LGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 465 ~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|++++|++.|+++++++|+..
T Consensus 98 ~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 98 EHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHHC------
T ss_pred cCCHHHHHHHHHHHHHhCcCCC
Confidence 9999999999999999999865
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.65 E-value=7.4e-16 Score=128.43 Aligned_cols=102 Identities=22% Similarity=0.432 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..++..|..++..|+|++|+..|+++++++|+ ++.+++++|.++..+|++++|+.+++++++++|+++.+|+++|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+..+|++++|++.|+++++++|+
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHChh
Confidence 99999999999999999999997
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.62 E-value=1e-15 Score=137.95 Aligned_cols=103 Identities=16% Similarity=0.040 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhc----------------HHHHHHhhCCHHHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFAR----------------RCLCYLLSDMPQEALGDAMQAQV 446 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~----------------~a~~~~~~~~~~~A~~~~~~al~ 446 (488)
+..+..+|..+++.|+|++|+..|+++++++|+ ++.+|+. +|.+|..+|++++|+..|+++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 456777888888888888888888888888887 7777777 88888888888888888888888
Q ss_pred hCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 447 ISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 447 l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++|+++.+|+++|.++..+|++++|++.|+++++++|++.
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~ 122 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNL 122 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 8888888888888888888888888888888888888753
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-15 Score=160.99 Aligned_cols=105 Identities=13% Similarity=0.027 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+.+.+++++|.++.+.|++++|++.|++||+++|+ ++.+|+++|.+|..+|++++|++.|++|++++|+++.+|+++|.
T Consensus 41 ~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~ 119 (723)
T 4gyw_A 41 EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLAS 119 (723)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 56889999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|..+|++++|+++|++|++++|+..
T Consensus 120 ~~~~~g~~~eAi~~~~~Al~l~P~~~ 145 (723)
T 4gyw_A 120 IHKDSGNIPEAIASYRTALKLKPDFP 145 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999999853
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.6e-15 Score=133.09 Aligned_cols=109 Identities=19% Similarity=0.265 Sum_probs=103.1
Q ss_pred hhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch----------------HHHhcHHHHHHhhCCHHHHHHH
Q 011349 377 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----------------TVFARRCLCYLLSDMPQEALGD 440 (488)
Q Consensus 377 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------~~~~~~a~~~~~~~~~~~A~~~ 440 (488)
.+..+.+..+..+|..++..|+|++|+..|++++++.|. ++ .++.++|.+|..+|++++|+.+
T Consensus 32 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 110 (198)
T 2fbn_A 32 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDH 110 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 455677889999999999999999999999999999998 65 8999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 441 AMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 441 ~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++++++++|+++.+++++|.++..+|++++|++.|+++++++|+..
T Consensus 111 ~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 156 (198)
T 2fbn_A 111 ASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 156 (198)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 9999999999999999999999999999999999999999999753
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=2.9e-16 Score=132.17 Aligned_cols=91 Identities=14% Similarity=0.061 Sum_probs=85.6
Q ss_pred HhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 011349 394 FRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMP----------QEALGDAMQAQVISPDWPTAFYLQAAALF 463 (488)
Q Consensus 394 ~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 463 (488)
-+.++|++|++.|++|++++|+ ++.+|+++|.++..++++ ++|+..|++||+++|++++||+++|.+|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 3557899999999999999999 999999999999999875 59999999999999999999999999999
Q ss_pred hCC-----------ChHHHHHHHHHhhcccccc
Q 011349 464 GLG-----------MNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 464 ~~~-----------~~~~A~~~~~~al~l~p~~ 485 (488)
.+| ++++|+++|++|++++|++
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 885 8999999999999999985
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=6.1e-15 Score=118.67 Aligned_cols=104 Identities=24% Similarity=0.384 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..++..|..++..|+|++|+..|+++++.+|. ++.++.++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+..+|++++|++.|+++++++|+..
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~ 106 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNP 106 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999999753
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.61 E-value=3.5e-15 Score=144.96 Aligned_cols=107 Identities=12% Similarity=0.154 Sum_probs=102.4
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---------------hHHHhcHHHHHHhhCCHHHHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---------------PTVFARRCLCYLLSDMPQEALGDAMQ 443 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 443 (488)
....+..++.+|+.+++.|+|++|+..|++|++++|+ + ..+|+++|.||.++|+|++|+.+|++
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 221 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 221 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4567889999999999999999999999999999999 6 68999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 444 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|++++|+++.+|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 222 al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 264 (336)
T 1p5q_A 222 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 264 (336)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Confidence 9999999999999999999999999999999999999999863
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=6e-15 Score=121.67 Aligned_cols=105 Identities=23% Similarity=0.364 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+.+++.+|..++..|+|++|+..|+++++.+|. +..++.++|.+|...|++++|+..++++++++|+++.+++++|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 34678999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|++.
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 118 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSCK 118 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGGT
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999999999753
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.61 E-value=3.3e-15 Score=151.40 Aligned_cols=107 Identities=14% Similarity=0.217 Sum_probs=99.6
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---------------hHHHhcHHHHHHhhCCHHHHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---------------PTVFARRCLCYLLSDMPQEALGDAMQ 443 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 443 (488)
..+.+..++.+|+.+++.|+|++|+..|++|++++|. + ..+|+|+|.||.++|+|++|+.+|++
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4567889999999999999999999999999999998 6 68999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 444 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|++++|+++++|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999864
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=6e-16 Score=131.83 Aligned_cols=97 Identities=10% Similarity=-0.082 Sum_probs=90.6
Q ss_pred HHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCCh
Q 011349 389 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMN 468 (488)
Q Consensus 389 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~ 468 (488)
.|..+..+|++++|+..|.+++..+|+ .+..++++|.+|.++|+|++|+++|+++++++|+++.+|+++|.++..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 578888999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccccc
Q 011349 469 NDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 469 ~~A~~~~~~al~l~p~~~ 486 (488)
++|+.+|+++++++|+..
T Consensus 82 ~~A~~~~~~al~~~p~~~ 99 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQK 99 (150)
T ss_dssp HHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCCH
Confidence 999999999999999864
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=4.4e-15 Score=140.46 Aligned_cols=104 Identities=21% Similarity=0.431 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..++.+|..++..|+|++|+..|++|++++|+ ++.+|+++|.+|..+|++++|+.++++|++++|+++.+++++|.+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|..+|++++|++.|+++++++|+..
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCccch
Confidence 9999999999999999999999763
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=9.7e-15 Score=122.95 Aligned_cols=104 Identities=23% Similarity=0.269 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
.+..++..|..++..|+|++|+..|+++++.+|+ + ..++.++|.+|..+|++++|+..++++++++|+++.+|+++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 4578899999999999999999999999999998 7 88999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|.++..+|++++|+..|+++++++|++.
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~p~~~ 133 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLEPKNK 133 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcH
Confidence 9999999999999999999999999753
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-14 Score=128.03 Aligned_cols=105 Identities=20% Similarity=0.198 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..+...|..+...++++.|+..+.++++++|+ +..++..+|.+|..+|++++|++.|+++++++|+++.+|+++|.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~ 149 (184)
T 3vtx_A 71 TSAEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGL 149 (184)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHH
Confidence 34678889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|..+|++++|+++|++|++++|++.
T Consensus 150 ~~~~~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 150 AYEGKGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhCCccCH
Confidence 99999999999999999999999753
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-14 Score=123.52 Aligned_cols=107 Identities=23% Similarity=0.380 Sum_probs=101.5
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
..+.+..++..|..++..|+|++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+|+++
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 87 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 3467889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|.++..+|++++|++.|+++++++|+..
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~~ 115 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHDK 115 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999753
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.58 E-value=5e-15 Score=134.36 Aligned_cols=105 Identities=14% Similarity=0.215 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..++.+|..+++.|++++|+..|+++++++|+ ++.+++++|.++..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 3 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhC-----------CChHHHHHHHHHhhccccccc
Q 011349 461 ALFGL-----------GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~-----------~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+ |++++|++.|+++++++|+..
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 99999 999999999999999999853
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=7.1e-15 Score=156.10 Aligned_cols=103 Identities=20% Similarity=0.163 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+.+.+|+++|.++.+.|++++|++.|++||+++|+ ++.+|+++|.+|..+|++++|++.|++|++++|+++.+|+++|.
T Consensus 75 ~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~-~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~ 153 (723)
T 4gyw_A 75 TFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPA-FADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAH 153 (723)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhh
Confidence 56778888888888888888888888888888888 88888888888888888888888888888888888888888888
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+|..+|++++|++.|++++++.|+
T Consensus 154 ~l~~~g~~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 154 CLQIVCDWTDYDERMKKLVSIVAD 177 (723)
T ss_dssp HHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHhcccHHHHHHHHHHHHHhChh
Confidence 888888888888888888888776
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.58 E-value=9.6e-15 Score=120.20 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch---HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC---HHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP---TVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---PTAFYL 457 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~~ 457 (488)
..++.+|..++..|+|++|+..|+++++.+|+ +. .+++++|.+|...|++++|+..|+++++.+|++ +.+++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 35788999999999999999999999999998 66 789999999999999999999999999999999 999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|.++..+|++++|++.|+++++.+|+.
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999975
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.58 E-value=8.6e-15 Score=116.69 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC--CHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD--WPTAFYLQAA 460 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~--~~~a~~~~g~ 460 (488)
+..++.+|..++..|+|++|+..|+++++++|. +..++.++|.++..+|++++|+..++++++++|+ +..+++.+|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 456778999999999999999999999999999 9999999999999999999999999999999999 9999999999
Q ss_pred HHHhC-CChHHHHHHHHHhhccccccc
Q 011349 461 ALFGL-GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~-~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+ |++++|+++++++++.+|..+
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 85 ALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999 999999999999999999754
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.58 E-value=4.6e-15 Score=144.17 Aligned_cols=109 Identities=16% Similarity=0.216 Sum_probs=98.1
Q ss_pred hhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch-----------------HHHhcHHHHHHhhCCHHHHHH
Q 011349 377 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP-----------------TVFARRCLCYLLSDMPQEALG 439 (488)
Q Consensus 377 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~~ 439 (488)
.+..+.+..++.+|+.+++.|+|++|+..|++|+++.|+ +. .+|+++|.||.++|+|++|+.
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 355677889999999999999999999999999999998 65 389999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 440 DAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 440 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|++|++++|+++.+|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~ 298 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDK 298 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH
Confidence 99999999999999999999999999999999999999999999864
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=3.2e-15 Score=147.31 Aligned_cols=104 Identities=8% Similarity=-0.026 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHhcCC-hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKD-FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
+++.+|+.+|.++...|+ |++|+..|++||+++|+ ++.+|+++|.++..+|++++|+.+|++||+++|+++.+|+++|
T Consensus 129 ~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg 207 (382)
T 2h6f_A 129 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQ 207 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHH
Confidence 556788888888888886 88888888888888888 8888888888888888888888888888888888888888888
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.++..+|++++|+++|+++++++|++
T Consensus 208 ~~~~~~g~~~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 208 WVIQEFKLWDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHcCChHHHHHHHHHHHHhCCCC
Confidence 88888888888888888888888865
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.57 E-value=6.4e-15 Score=144.83 Aligned_cols=109 Identities=20% Similarity=0.270 Sum_probs=102.6
Q ss_pred hhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhc----------------cCCCCchHHHhcHHHHHHhhCCHHHHHHH
Q 011349 377 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFID----------------GGTMVSPTVFARRCLCYLLSDMPQEALGD 440 (488)
Q Consensus 377 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~ 440 (488)
.+..+.+..++.+|+.+++.|+|++|+..|++|++ ++|. ...+|+++|.+|.++|+|++|+.+
T Consensus 217 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 217 DKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHHH
Confidence 34456778899999999999999999999999998 7887 889999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 441 AMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 441 ~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|++|++++|+++++|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 296 ~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~ 341 (370)
T 1ihg_A 296 CLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 341 (370)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999999753
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-14 Score=130.56 Aligned_cols=96 Identities=9% Similarity=0.005 Sum_probs=90.1
Q ss_pred HHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh----
Q 011349 389 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG---- 464 (488)
Q Consensus 389 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~---- 464 (488)
+|.+++..|+|++|+..|+++++++|+ ++.+++++|.+|..+|++++|+.+|+++++++|+++.+|+++|.+|+.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999 999999999999999999999999999999999999999988887643
Q ss_pred -------------------------------CCChHHHHHHHHHhhcccccc
Q 011349 465 -------------------------------LGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 465 -------------------------------~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|+|++|+++|++|++++|+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 346899999999999999973
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=132.26 Aligned_cols=104 Identities=18% Similarity=0.165 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCC-CCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGT-MVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
++..++.+|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+.+|+++++++|+++.+|+.+|.
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 84 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSA 84 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 457899999999999999999999999999998 7 88888899999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|++.
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999999854
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=4e-14 Score=116.02 Aligned_cols=106 Identities=21% Similarity=0.282 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++..++..|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++.+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 466789999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++|++.|+++++++|+..
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 114 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELDPDNE 114 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCccch
Confidence 999999999999999999999999753
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.56 E-value=9.3e-15 Score=144.03 Aligned_cols=105 Identities=13% Similarity=-0.054 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCC-HHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM-PQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
+.+.+|..+|.++...|++++|+..|+++|+++|+ +..+|+++|.++..+|+ +++|+.+|++||+++|+++.+|+++|
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g 173 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 173 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 56789999999999999999999999999999999 99999999999999997 99999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++|+++|++|++++|++.
T Consensus 174 ~~~~~~g~~~eAl~~~~kal~ldP~~~ 200 (382)
T 2h6f_A 174 VLVEWLRDPSQELEFIADILNQDAKNY 200 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCccCH
Confidence 999999999999999999999999863
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.7e-14 Score=116.34 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC-------HH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW-------PT 453 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~-------~~ 453 (488)
+.+..++..|..++..|+|++|+..|+++++.+|. ++.++.++|.+|..+|++++|+..+++++++.|++ +.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 45678999999999999999999999999999999 99999999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 454 AFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 454 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+++++|.++..+|++++|++.|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999885
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.5e-15 Score=120.52 Aligned_cols=91 Identities=13% Similarity=0.036 Sum_probs=82.5
Q ss_pred hcCChHHHHHHHHHhhcc---CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHH
Q 011349 395 RAKDFPTAIECYTHFIDG---GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDA 471 (488)
Q Consensus 395 ~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A 471 (488)
..|+|++|+..|++++++ +|+ +..++.++|.+|..+|+|++|+..|+++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 588 8899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccc
Q 011349 472 QETLKDGTNLEAKKH 486 (488)
Q Consensus 472 ~~~~~~al~l~p~~~ 486 (488)
++.|+++++++|+.+
T Consensus 81 ~~~~~~al~~~p~~~ 95 (117)
T 3k9i_A 81 VELLLKIIAETSDDE 95 (117)
T ss_dssp HHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHhCCCcH
Confidence 999999999988753
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.4e-14 Score=128.89 Aligned_cols=103 Identities=15% Similarity=0.060 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHhc-----------CChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCC
Q 011349 381 QETLNSKKRGDAAFRA-----------KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISP 449 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~-----------~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p 449 (488)
+++..++.+|.++... |++++|+..|+++++++|+ ++.++.++|.+|..+|++++|+..|++|++++
T Consensus 71 ~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~- 148 (217)
T 2pl2_A 71 RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE- 148 (217)
T ss_dssp TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-
Confidence 4566777888888888 8888888888888888887 77788888888888888888888888888888
Q ss_pred CCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 450 DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 450 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+++.+++++|.++..+|++++|++.|+++++++|+.
T Consensus 149 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 184 (217)
T 2pl2_A 149 DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKD 184 (217)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 778888888888888888888888888888888765
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.52 E-value=8.1e-14 Score=122.41 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++.++..+|.++++.|++++|+..+.+++..+|+ .+.++.++|.++...++++.|+..+.++++++|++..+++.+|.
T Consensus 37 ~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~ 115 (184)
T 3vtx_A 37 NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGL 115 (184)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 44566666666666666666666666666666666 66666666666666777777777777777788888888888888
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+|++++|++.|+++++++|+.
T Consensus 116 ~~~~~g~~~~A~~~~~~~l~~~p~~ 140 (184)
T 3vtx_A 116 VYDSMGEHDKAIEAYEKTISIKPGF 140 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHhCCchhHHHHHHHHHHhcchh
Confidence 8888888888888888888888865
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=126.08 Aligned_cols=103 Identities=16% Similarity=0.177 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH-------H
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP-------T 453 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-------~ 453 (488)
.+...++.+|.+++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++ .
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 45578888999999999999999999999999999 999999999999999999999999999999999999 7
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 454 AFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 454 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+|+++|.++..+|++++|++.|++|++++|+
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999999999999997
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.5e-13 Score=123.53 Aligned_cols=103 Identities=16% Similarity=0.096 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH---------
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP--------- 452 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~--------- 452 (488)
++..++..|.+++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+.+|++++++.|++.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 114 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 114 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcc
Confidence 4678999999999999999999999999999999 999999999999999999999999999999988877
Q ss_pred -------HHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 453 -------TAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 453 -------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+++++|.++..+|++++|++.|+++++++|+.
T Consensus 115 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 115 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred ccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 999999999999999999999999999999964
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2.5e-13 Score=110.16 Aligned_cols=104 Identities=18% Similarity=0.234 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..++..|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 86 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 3678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+..+|++++|+..|+++++++|+..
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~~~~~ 111 (125)
T 1na0_A 87 YYKQGDYDEAIEYYQKALELDPNNA 111 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCcH
Confidence 9999999999999999999999753
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.2e-13 Score=120.64 Aligned_cols=105 Identities=14% Similarity=0.133 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHH-HHhhCCH--HHHHHHHHHHHHhCCCCHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLC-YLLSDMP--QEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~--~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
.++..|+..|..++..|+|++|+..|+++++++|+ ++.++.++|.+ +...|++ ++|+..++++++++|+++.+++.
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 120 (177)
T 2e2e_A 42 QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALML 120 (177)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHH
Confidence 45678999999999999999999999999999999 99999999999 8899999 99999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|.++..+|++++|+..|+++++++|+..
T Consensus 121 la~~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 121 LASDAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 99999999999999999999999999764
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.5e-14 Score=115.62 Aligned_cols=96 Identities=14% Similarity=0.203 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC------HHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW------PTAF 455 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~ 455 (488)
++..++.+|..++..|+|++|+..|+++++++|+ ++.+++++|.+|..+|++++|+.+++++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 4678999999999999999999999999999999 99999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHh
Q 011349 456 YLQAAALFGLGMNNDAQETLKDG 478 (488)
Q Consensus 456 ~~~g~~~~~~~~~~~A~~~~~~a 478 (488)
+++|.++..+|++++|++.|++.
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHhHhhhHhHHHHh
Confidence 99999999999999998877653
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.47 E-value=2.9e-14 Score=145.09 Aligned_cols=105 Identities=24% Similarity=0.379 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+.+.+++.+|..+++.|+|++|++.|++|++++|+ ++.+|+++|.+|.++|++++|+++|++|++++|+++.+|+++|.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 55678889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|..+|++++|++.|++|++++|+..
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999764
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.2e-13 Score=129.06 Aligned_cols=137 Identities=12% Similarity=-0.005 Sum_probs=109.3
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
+.+...+|.|+.+.||++... ++.+++|+...........+.+|+.+++.+. +.+++++++++...+..|+|||+++|
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 456666788888999999754 6779999987532233456899999999995 67888999999888899999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh--------------------------------------------
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-------------------------------------------- 170 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-------------------------------------------- 170 (488)
.+|.+.+. +......++.+++++|..||+
T Consensus 95 ~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 95 VLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp EEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred eehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 99987642 122345788899999999998
Q ss_pred ---------------CCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 171 ---------------KGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 171 ---------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
.. ++|+|++|.|||++++..+.|+||+.+.
T Consensus 168 ~~l~~~l~~~~~~~~~~-l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHCCCCCCEE-EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCce-EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 23 7999999999999876566799999764
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.45 E-value=4.8e-14 Score=119.85 Aligned_cols=84 Identities=7% Similarity=-0.263 Sum_probs=80.2
Q ss_pred HHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 402 AIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 402 A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
+-..|+++++++|+ +..+++++|.++...|+|++|+..|+++++++|+++.+|+++|.++..+|+|++|+++|++|+++
T Consensus 21 ~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 21 SGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp TSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 44668999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 011349 482 EAKKH 486 (488)
Q Consensus 482 ~p~~~ 486 (488)
+|++.
T Consensus 100 ~P~~~ 104 (151)
T 3gyz_A 100 GKNDY 104 (151)
T ss_dssp SSSCC
T ss_pred CCCCc
Confidence 99864
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.44 E-value=6.9e-13 Score=123.83 Aligned_cols=106 Identities=14% Similarity=-0.001 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
...+..++.+|..++..|++++|+..|+++++++|+ +..++.++|.+|...|++++|+..|+++++++|+++.+++.+|
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 456889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++|++.|+++++++|+..
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999999753
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.44 E-value=8.8e-13 Score=118.50 Aligned_cols=102 Identities=13% Similarity=0.101 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..++.+|..++..|+|++|+..|++++ +| ++.+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 456788999999999999999999999997 34 56799999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|++++++.|++.
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999988754
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.2e-12 Score=120.82 Aligned_cols=102 Identities=21% Similarity=0.291 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
...+..+...|..++..|+|++|+..|+++++.+|. ++.++.++|.+|..+|++++|+..++++++++|+++.+|+.+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 214 (258)
T 3uq3_A 136 PEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKA 214 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 356788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~ 482 (488)
.++..+|++++|++.|+++++++
T Consensus 215 ~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 215 TAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhC
Confidence 99999999999999999999999
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.2e-13 Score=108.25 Aligned_cols=85 Identities=16% Similarity=0.148 Sum_probs=81.9
Q ss_pred HHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhh
Q 011349 400 PTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGT 479 (488)
Q Consensus 400 ~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 479 (488)
++|+..|+++++.+|+ ++.+++++|.+|...|++++|+..|+++++++|+++.+|+.+|.++..+|++++|++.|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4689999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 011349 480 NLEAKK 485 (488)
Q Consensus 480 ~l~p~~ 485 (488)
+++|+.
T Consensus 81 ~~~~~~ 86 (115)
T 2kat_A 81 AAAQSR 86 (115)
T ss_dssp HHHHHH
T ss_pred Hhcccc
Confidence 999864
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.41 E-value=8.1e-13 Score=123.10 Aligned_cols=105 Identities=13% Similarity=0.045 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC---HHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---PTA 454 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---~~a 454 (488)
.++..++.+|..+++.|+|++|+..|+++++.+|+ + +.+++++|.+|..+|+|++|+..|+++++++|++ +.+
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 45678999999999999999999999999999998 7 8899999999999999999999999999998854 679
Q ss_pred HHHHHHHHHh--------CCChHHHHHHHHHhhccccccc
Q 011349 455 FYLQAAALFG--------LGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 455 ~~~~g~~~~~--------~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++.+|.+++. +|++++|++.|+++++++|+..
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 9999999999 9999999999999999999864
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.8e-13 Score=144.10 Aligned_cols=105 Identities=10% Similarity=-0.081 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+++..++.+|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+++|++|++++|+++.+|+++|
T Consensus 430 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg 508 (681)
T 2pzi_A 430 SESVELPLMEVRALLDLGDVAKATRKLDDLAERVGW-RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALA 508 (681)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHH
T ss_pred ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 356789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++ ++.|++|++++|+..
T Consensus 509 ~~~~~~g~~~~-~~~~~~al~~~P~~~ 534 (681)
T 2pzi_A 509 ATAELAGNTDE-HKFYQTVWSTNDGVI 534 (681)
T ss_dssp HHHHHHTCCCT-TCHHHHHHHHCTTCH
T ss_pred HHHHHcCChHH-HHHHHHHHHhCCchH
Confidence 99999999999 999999999999853
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.40 E-value=5e-13 Score=104.51 Aligned_cols=93 Identities=16% Similarity=0.124 Sum_probs=86.9
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHhhccCCCCchH-HHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 011349 386 SKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT-VFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 464 (488)
Q Consensus 386 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 464 (488)
.+++|..++..|+|++|+..|+++++.+|+ ++. +++++|.+|..+|++++|+..|+++++++|+++.++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 357899999999999999999999999999 888 99999999999999999999999999999999999866
Q ss_pred CCChHHHHHHHHHhhcccccccC
Q 011349 465 LGMNNDAQETLKDGTNLEAKKHR 487 (488)
Q Consensus 465 ~~~~~~A~~~~~~al~l~p~~~~ 487 (488)
+.+.+|+..|+++++++|+...
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCSS
T ss_pred -HHHHHHHHHHHHHhccCccccc
Confidence 7889999999999999998653
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.6e-12 Score=118.48 Aligned_cols=105 Identities=9% Similarity=0.020 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc--hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH---HHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS--PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT---AFY 456 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~---a~~ 456 (488)
.+..++.+|..+++.|+|++|+..|+++++..|++. ..+++++|.+|.++|+|++|+..|+++++++|+++. +++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 356899999999999999999999999999998722 368999999999999999999999999999999975 899
Q ss_pred HHHHHHHh------------------CCChHHHHHHHHHhhccccccc
Q 011349 457 LQAAALFG------------------LGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 457 ~~g~~~~~------------------~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|.+++. +|++++|+..|+++++.+|+..
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 99999986 6899999999999999999864
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.39 E-value=4.1e-12 Score=104.17 Aligned_cols=102 Identities=20% Similarity=0.244 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
+...+...|..+...|++++|+..|+++++.+|. ...++.++|.++...|++++|+..++++++..|++..+++.+|.+
T Consensus 34 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 112 (136)
T 2fo7_A 34 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNA 112 (136)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4567888999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+..+|++++|+..|+++++++|+
T Consensus 113 ~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 113 YYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHccHHHHHHHHHHHHccCCC
Confidence 99999999999999999999986
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.38 E-value=3.8e-12 Score=104.37 Aligned_cols=101 Identities=20% Similarity=0.244 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 463 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 463 (488)
.+++..|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..+++++++.|+++.+++.+|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 46888999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 011349 464 GLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 464 ~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+|++++|++.|+++++++|+.
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRS 102 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhcCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999998864
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.6e-12 Score=106.91 Aligned_cols=82 Identities=13% Similarity=0.075 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++..|..+|.+++..|++++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|+++++++|++.+++..++
T Consensus 44 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~ 122 (126)
T 4gco_A 44 PENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK-FIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVR 122 (126)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHH
Confidence 356889999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred HHH
Q 011349 460 AAL 462 (488)
Q Consensus 460 ~~~ 462 (488)
.++
T Consensus 123 ~~l 125 (126)
T 4gco_A 123 NCL 125 (126)
T ss_dssp HHC
T ss_pred Hhc
Confidence 874
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.37 E-value=2e-12 Score=126.47 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..+...|..+...|++++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 5678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+..+|++++|++.|+++++++|+.
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999874
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.6e-12 Score=127.18 Aligned_cols=104 Identities=15% Similarity=0.097 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..++.+|..+++.|+|++|+..|+++++.+|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+|+.+|.+
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVS 142 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3457899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+..+|++++|++.|+++++++|+..
T Consensus 143 ~~~~g~~~~A~~~~~~al~~~p~~~ 167 (365)
T 4eqf_A 143 YTNTSHQQDACEALKNWIKQNPKYK 167 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCHHHH
T ss_pred HHccccHHHHHHHHHHHHHhCccch
Confidence 9999999999999999999999743
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.36 E-value=4.3e-12 Score=110.41 Aligned_cols=105 Identities=12% Similarity=0.068 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|.
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 152 (186)
T 3as5_A 74 DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAF 152 (186)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 34678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|+..
T Consensus 153 ~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 153 SYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 99999999999999999999999754
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=3.2e-12 Score=133.16 Aligned_cols=104 Identities=9% Similarity=-0.023 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++..+...|..+...|++++|++.|+++++++|+ +..+++++|.+|..+|++++|++.|+++++++|+++.+++++|.
T Consensus 55 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 133 (568)
T 2vsy_A 55 GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLN 133 (568)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44667777777777777777777777777777777 77777777777777777777777777777777777777777777
Q ss_pred HHHhC---CChHHHHHHHHHhhcccccc
Q 011349 461 ALFGL---GMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~---~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+ |++++|++.|+++++.+|+.
T Consensus 134 ~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 134 WRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 77777 77777777777777777764
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.2e-12 Score=122.95 Aligned_cols=101 Identities=17% Similarity=0.245 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..++..|..++..|+|++|+..|+++++.+|+ ++.++.++|.++..+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 5678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p 483 (488)
+..+|++++|++.|+++++++|
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCC
T ss_pred HHHcCChHHHHHHHHHHHhcCC
Confidence 9999999999999999999999
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.35 E-value=6e-12 Score=96.26 Aligned_cols=85 Identities=18% Similarity=0.137 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..++..|..++..|+|++|+..|+++++.+|+ +..++.++|.+|...|++++|+..++++++++|+++.+++++|.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCC
Q 011349 461 ALFGLG 466 (488)
Q Consensus 461 ~~~~~~ 466 (488)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998764
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.34 E-value=6.1e-12 Score=128.47 Aligned_cols=105 Identities=22% Similarity=0.295 Sum_probs=99.9
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
+.+.+..++.+|..+++.|+|++|+..|+++++.+| ++.+|.++|.+|..+|++++|+.+++++++++|+++.+|+.+
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 79 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE--DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRR 79 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc--cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHH
Confidence 346789999999999999999999999999999998 578899999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
|.++..+|++++|+..|+++++++|..
T Consensus 80 ~~~~~~~g~~~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 80 ASANEGLGKFADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHhhHHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999853
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-12 Score=131.81 Aligned_cols=103 Identities=12% Similarity=0.039 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHhc---------CChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhh--------CCHHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRA---------KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS--------DMPQEALGDAMQAQ 445 (488)
Q Consensus 383 ~~~~~~~g~~~~~~---------~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~--------~~~~~A~~~~~~al 445 (488)
+..+...|.++... |+|++|+..|++|++++|+ ++.+|+++|.+|..+ |++++|+..|++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 57899999999999 9999999999999999999 999999999999999 99999999999999
Q ss_pred HhCC---CCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 446 VISP---DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 446 ~l~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+++| +++.+|+++|.+|..+|++++|++.|++|++++|++.
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999 9999999999999999999999999999999999864
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.33 E-value=5.2e-12 Score=110.22 Aligned_cols=105 Identities=13% Similarity=-0.020 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHH-HHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLC-YLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
..+++.+++..|..+...|++++|+..|+++++.+| ++.++..++.+ +...++..+|+..++++++++|+++.+++.
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~ 113 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACE 113 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHH
Confidence 446788999999999999999999999999999998 34455555543 333344556899999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|.++..+|++++|+..|+++++++|+.
T Consensus 114 la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 114 LAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999874
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-11 Score=107.74 Aligned_cols=103 Identities=15% Similarity=0.062 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..+...|..++..|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 119 (186)
T 3as5_A 41 DVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVA 119 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHH
Confidence 4678899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+..+|++++|++.|+++++++|+.
T Consensus 120 ~~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 120 LDNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHcCcHHHHHHHHHHHHhcCccc
Confidence 999999999999999999998864
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=5.8e-12 Score=119.27 Aligned_cols=104 Identities=12% Similarity=-0.058 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++.+++.+|.++.+.|++++|+..|++++..+|+ ......+.+..+...++.++|+..++++++++|+++.+++++|.
T Consensus 149 ~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~ 227 (287)
T 3qou_A 149 QNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQD-TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLAL 227 (287)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCS-HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcc-hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHH
Confidence 34455566666666666666666666666666664 55555555555555566666677788889999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|..+|++++|++.|+++++++|+.
T Consensus 228 ~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 228 QLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHHcccHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999986
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.3e-12 Score=131.09 Aligned_cols=104 Identities=13% Similarity=-0.005 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHhcCCh-HHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDF-PTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~-~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.++..++.+|..++..|+| ++|+..|++|++++|+ ++.+|+++|.+|..+|++++|++.|++|++++|+ +.+++++|
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg 177 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLS 177 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHH
Confidence 4678999999999999999 9999999999999999 9999999999999999999999999999999999 79999999
Q ss_pred HHHHhC---------CChHHHHHHHHHhhccccccc
Q 011349 460 AALFGL---------GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~---------~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+ |++++|++.|++|++++|+..
T Consensus 178 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 213 (474)
T 4abn_A 178 MVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG 213 (474)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH
Confidence 999999 999999999999999999853
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=8.6e-12 Score=113.99 Aligned_cols=105 Identities=13% Similarity=0.095 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.+...+...|..++..|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++.+|+++.+++.+|.
T Consensus 123 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 201 (243)
T 2q7f_A 123 ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGV 201 (243)
T ss_dssp CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 34668899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|+..
T Consensus 202 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 227 (243)
T 2q7f_A 202 TYAYKENREKALEMLDKAIDIQPDHM 227 (243)
T ss_dssp HHHHTTCTTHHHHHHHHHHHHCTTCH
T ss_pred HHHHccCHHHHHHHHHHHHccCcchH
Confidence 99999999999999999999999854
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.31 E-value=3.9e-12 Score=99.87 Aligned_cols=73 Identities=18% Similarity=0.155 Sum_probs=58.6
Q ss_pred cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 412 GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 412 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+|+ ++.+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|++.|+++++++|+.
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 3677 778888888888888888888888888888888888888888888888888888888888888887754
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-11 Score=113.31 Aligned_cols=102 Identities=14% Similarity=0.109 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 90 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 168 (243)
T 2q7f_A 90 AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGME-NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMC 168 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 3455566666666666666666666666666666 566666666666666666666666666666666666666666666
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+..+|++++|++.|+++++++|+
T Consensus 169 ~~~~~~~~~A~~~~~~~~~~~~~ 191 (243)
T 2q7f_A 169 LANEGMLDEALSQFAAVTEQDPG 191 (243)
T ss_dssp HHHHTCCHHHHHHHHHHHHHCTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCcc
Confidence 66666666666666666666554
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.31 E-value=6.3e-12 Score=117.01 Aligned_cols=103 Identities=16% Similarity=0.089 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC--chHHHhcHHHHHHh--------hCCHHHHHHHHHHHHHhCCCCH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV--SPTVFARRCLCYLL--------SDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~a~~~~~--------~~~~~~A~~~~~~al~l~p~~~ 452 (488)
+.+++.+|.+++..|+|++|+..|++++++.|++ .+.+++++|.++.. +|++++|+..|+++++++|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 6789999999999999999999999999998851 45789999999999 9999999999999999999997
Q ss_pred HHH-----------------HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 453 TAF-----------------YLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 453 ~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.++ +.+|.+|+.+|++++|+..|+++++.+|+.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 766 899999999999999999999999999974
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.31 E-value=5.5e-12 Score=129.72 Aligned_cols=107 Identities=25% Similarity=0.322 Sum_probs=96.0
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
+..+.+..++.+|..+++.|+|++|+..|+++++.+|+ ++.++.++|.+|..+|++++|+..|+++++++|+++.+++.
T Consensus 20 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 98 (537)
T 3fp2_A 20 QRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLR 98 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHH
Confidence 34467899999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|.++..+|++++|++.|+ ++.++|+..
T Consensus 99 la~~~~~~g~~~~A~~~~~-~~~~~~~~~ 126 (537)
T 3fp2_A 99 RASANESLGNFTDAMFDLS-VLSLNGDFD 126 (537)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHC------
T ss_pred HHHHHHHcCCHHHHHHHHH-HHhcCCCCC
Confidence 9999999999999999996 888888743
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.31 E-value=7.1e-12 Score=122.29 Aligned_cols=103 Identities=15% Similarity=0.199 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..+...|..+...|++++|+..|+++++++|+ ++.+++++|.++..+|++++|+..|+++++++|+++.+++++|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+..+|++++|++.|+++++++|+.
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999975
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.7e-12 Score=110.03 Aligned_cols=84 Identities=10% Similarity=-0.066 Sum_probs=79.9
Q ss_pred HHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 402 AIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 402 A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
+-..|+++++++|+ +..+++++|.++...|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+++|++|+++
T Consensus 6 ~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 6 GGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34568999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 011349 482 EAKKH 486 (488)
Q Consensus 482 ~p~~~ 486 (488)
+|++.
T Consensus 85 ~p~~~ 89 (148)
T 2vgx_A 85 DIXEP 89 (148)
T ss_dssp STTCT
T ss_pred CCCCc
Confidence 99864
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.4e-11 Score=123.71 Aligned_cols=106 Identities=16% Similarity=0.244 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++..+..+|..+++.|+|++|+..|+++++.+|+ ++.+++++|.+|..+|++++|+..|+++++++|+++.+++.+|
T Consensus 23 p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 101 (450)
T 2y4t_A 23 MADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRG 101 (450)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 467889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|..+|++++|++.|+++++++|+..
T Consensus 102 ~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 102 HLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 999999999999999999999999753
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.30 E-value=7.5e-12 Score=116.57 Aligned_cols=126 Identities=12% Similarity=0.065 Sum_probs=97.6
Q ss_pred CCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC--CcccccceecCCeeeEEEecCCCCChhhh
Q 011349 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER--LVNLIGCCCEGEERLLVAEFMPNETLSKH 140 (488)
Q Consensus 63 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 140 (488)
+.|+.+.||++...+|..++||+.... ....+.+|+.+++.+.+.+ ++++++++..++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 456679999998777888999997654 2356889999999996544 566888887777899999999998884
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------------
Q 011349 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKG------------------------------------------------ 172 (488)
Q Consensus 141 l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------------ 172 (488)
.. . .+ ...++.+++..|..||+..
T Consensus 104 ~~---~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SS---H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TS---C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cC---c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 31 1 12 2356778888888888642
Q ss_pred ---------CcccccccCCceeecCCCCCeeccCCCcc
Q 011349 173 ---------RALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 173 ---------~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
.++|+|++|.||++++++.+.|+|||.+.
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 18999999999999877667799999864
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.4e-11 Score=120.08 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..++.+|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..|+++++++|+++.+++.+|.++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 142 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 142 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+|++++|++.|+++++++|+..
T Consensus 143 ~~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 143 TNESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTG
T ss_pred HHcCCHHHHHHHHHHHHHhCcCcH
Confidence 999999999999999999999754
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.3e-11 Score=113.75 Aligned_cols=103 Identities=15% Similarity=0.064 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhc--------------------------cCCCCchHHHhcHHHHHHhhCCHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFID--------------------------GGTMVSPTVFARRCLCYLLSDMPQE 436 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~--------------------------~~p~~~~~~~~~~a~~~~~~~~~~~ 436 (488)
+..+...|..+...|++++|+..|+++++ .+|. ...++.++|.++...|++++
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHH
Confidence 67888888888888888888888888888 7777 78899999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 437 ALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 437 A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|+..++++++++|+++.+|+.+|.++..+|++++|++.|+++++++|+..
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 207 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV 207 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHH
Confidence 99999999999999999999999999999999999999999999999753
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.5e-11 Score=109.29 Aligned_cols=104 Identities=14% Similarity=-0.023 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhh-CCHHHHHHHHHHHHH--hCCCCHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS-DMPQEALGDAMQAQV--ISPDWPTAFYL 457 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~--l~p~~~~a~~~ 457 (488)
.++..+...|..+...|++++|+..|+++++.+|. +..++.++|.++... |++++|+..++++++ .+|++..+++.
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 118 (225)
T 2vq2_A 40 KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLN 118 (225)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHH
Confidence 44678888888888889999999999999888888 888888888888888 899999999999888 66777888888
Q ss_pred HHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|.++..+|++++|++.|+++++++|+.
T Consensus 119 l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 146 (225)
T 2vq2_A 119 KGICSAKQGQFGLAEAYLKRSLAAQPQF 146 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999988888864
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=7.3e-12 Score=118.86 Aligned_cols=106 Identities=15% Similarity=0.042 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHhc-CChHHHHHHHHHhhccCCCCc-----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH-
Q 011349 381 QETLNSKKRGDAAFRA-KDFPTAIECYTHFIDGGTMVS-----PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT- 453 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~- 453 (488)
..+..+...|.++... |+|++|+..|++|+++.|.+. ..++.++|.+|..+|+|++|+..|++++++.|++..
T Consensus 115 ~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 194 (292)
T 1qqe_A 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS 194 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc
Confidence 3467899999999996 999999999999999887521 467999999999999999999999999999998754
Q ss_pred ------HHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 454 ------AFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 454 ------a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|+++|.++..+|++++|+.+|+++++++|+..
T Consensus 195 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 195 QWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-----
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Confidence 689999999999999999999999999999743
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.29 E-value=6.7e-12 Score=117.03 Aligned_cols=104 Identities=7% Similarity=-0.011 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS----PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
.++..+..+|..++..|+|++|+..|+++++ .|. + ..+|.++|.+|..+|++++|+..|+++++++|+++.+|+
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~-~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 112 (272)
T 3u4t_A 35 NSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVN-ATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYG 112 (272)
T ss_dssp CCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSC-TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHH
T ss_pred CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccC-chhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHH
Confidence 4566899999999999999999999999999 443 3 334899999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|.++..+|++++|++.|+++++++|+..
T Consensus 113 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 142 (272)
T 3u4t_A 113 QIGSYFYNKGNFPLAIQYMEKQIRPTTTDP 142 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHGGGCCSSCCCH
T ss_pred HHHHHHHHccCHHHHHHHHHHHhhcCCCcH
Confidence 999999999999999999999999998753
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.29 E-value=8.8e-12 Score=116.19 Aligned_cols=98 Identities=16% Similarity=0.106 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHH-HHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRC-LCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a-~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
+..+...|..++..|+|++|+..|+++++++|. ++.++.++| .+|.. +++++|+..++++++++|+++.+++.+|.+
T Consensus 108 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 185 (272)
T 3u4t_A 108 LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTT-DPKVFYELGQAYYYN-KEYVKADSSFVKVLELKPNIYIGYLWRARA 185 (272)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCC-CHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCC-cHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 345555555555555555555555555555555 555555555 33332 355555555555555555555555555555
Q ss_pred HHhCCC---hHHHHHHHHHhhccc
Q 011349 462 LFGLGM---NNDAQETLKDGTNLE 482 (488)
Q Consensus 462 ~~~~~~---~~~A~~~~~~al~l~ 482 (488)
+..+|+ +++|+..|++++++.
T Consensus 186 ~~~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 186 NAAQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHcCcchhhHHHHHHHHHHHHHH
Confidence 555555 555555555555443
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2e-11 Score=112.47 Aligned_cols=101 Identities=13% Similarity=0.013 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhc--cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFID--GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~--~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+..+...|..++..|++++|++.|+++++ .+|. ...++.++|.+|...|++++|+..++++++++|+++.+++.+|.
T Consensus 105 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~ 183 (252)
T 2ho1_A 105 ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPE-RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMAD 183 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 34445555555555555555555555555 4454 45555555555555555555555555555555555555555555
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
++..+|++++|++.|+++++++|+
T Consensus 184 ~~~~~g~~~~A~~~~~~~~~~~~~ 207 (252)
T 2ho1_A 184 LLYKEREYVPARQYYDLFAQGGGQ 207 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTSCC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCcC
Confidence 555555555555555555555553
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.8e-11 Score=112.82 Aligned_cols=104 Identities=12% Similarity=0.048 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHH--hCCCCHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQV--ISPDWPTAFYLQ 458 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--l~p~~~~a~~~~ 458 (488)
..+..+...|..++..|++++|++.|+++++.+|. +..++.++|.+|...|++++|+..++++++ ..|.++.+++.+
T Consensus 69 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l 147 (252)
T 2ho1_A 69 SSADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENL 147 (252)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHH
Confidence 45788999999999999999999999999999999 899999999999999999999999999999 889999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
|.++..+|++++|++.|+++++++|+.
T Consensus 148 a~~~~~~g~~~~A~~~~~~~~~~~~~~ 174 (252)
T 2ho1_A 148 GLVSLQMKKPAQAKEYFEKSLRLNRNQ 174 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCccc
Confidence 999999999999999999999998864
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.8e-11 Score=120.66 Aligned_cols=103 Identities=14% Similarity=0.034 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..+...|..+.+.|++++|+..|+++++++|+ +..++.++|.++...|++++|+..++++++++|+++.+++++|.+
T Consensus 270 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 348 (388)
T 1w3b_A 270 FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 348 (388)
T ss_dssp CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 4567778888888888888888888888888887 777888888888888888888888888888888888888888888
Q ss_pred HHhCCChHHHHHHHHHhhcccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+..+|++++|++.|+++++++|+.
T Consensus 349 ~~~~g~~~~A~~~~~~a~~~~p~~ 372 (388)
T 1w3b_A 349 LQQQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp HHTTTCCHHHHHHHHHHHTTCTTC
T ss_pred HHHcCCHHHHHHHHHHHHhhCCCC
Confidence 888888888888888888888764
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.5e-11 Score=121.19 Aligned_cols=104 Identities=12% Similarity=0.021 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+++..+...|..+...|++++|+..|+++++++|+ .+.+|.++|.++.+.|++++|+..|+++++++|+++.+++.+|.
T Consensus 235 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 313 (388)
T 1w3b_A 235 NHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 313 (388)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS-CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+|++++|++.|+++++++|+.
T Consensus 314 ~~~~~g~~~~A~~~~~~al~~~p~~ 338 (388)
T 1w3b_A 314 IKREQGNIEEAVRLYRKALEVFPEF 338 (388)
T ss_dssp HHHTTTCHHHHHHHHHHHTTSCTTC
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999975
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.2e-11 Score=119.23 Aligned_cols=159 Identities=14% Similarity=0.173 Sum_probs=114.8
Q ss_pred cccCHHHHHHHh----cCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEcc--CCC-CCChHHHHHHHHHHhhcC--C
Q 011349 39 REFNLDQLRAAT----SGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFN--RSA-WPDSRQFLEEARAVGLLR--S 109 (488)
Q Consensus 39 ~~~~~~~~~~~~----~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h 109 (488)
..++...+.... .++....-++.++.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.+. +
T Consensus 19 ~~ld~~~l~~~l~~~~~~~~~~~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~ 97 (359)
T 3dxp_A 19 QRFDTEALEAWMRQHVEGFAGPLSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTD 97 (359)
T ss_dssp -CCCHHHHHHHHHHHSTTCCCCCEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSS
T ss_pred cCCCHHHHHHHHHHhCCCCCCCceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCC
Confidence 345555544432 234444456788999999999998754 568888876 332 122457889999999996 4
Q ss_pred CCCcccccceecC---CeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------------
Q 011349 110 ERLVNLIGCCCEG---EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK--------------- 171 (488)
Q Consensus 110 ~niv~~~~~~~~~---~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------------- 171 (488)
..+++++.++.+. +..++||||++|.++.+.. -..++..++..++.++++.|..||+.
T Consensus 98 vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~ 173 (359)
T 3dxp_A 98 VPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGN 173 (359)
T ss_dssp SCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSC
T ss_pred CCCCcEEEECCCCCccCCeEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCC
Confidence 5688889888765 4589999999998885432 13478889999999999999999972
Q ss_pred ------------------------------------------CCcccccccCCceeecCCCC--CeeccCCCccc
Q 011349 172 ------------------------------------------GRALYHDLNTYRILFDQDGN--PRLSCFGLMKN 202 (488)
Q Consensus 172 ------------------------------------------~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~ 202 (488)
..++|+|++|.|||++.++. +.|+||+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 174 YFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 12899999999999987653 58999998753
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.8e-11 Score=116.08 Aligned_cols=93 Identities=12% Similarity=0.084 Sum_probs=87.0
Q ss_pred HHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHH-H
Q 011349 393 AFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNND-A 471 (488)
Q Consensus 393 ~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~-A 471 (488)
+...|++++|+..|+++++.+|+ ++.+++++|.++.++|++++|+..++++++++|+++++++++|.++..+|++++ |
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 34569999999999999999999 999999999999999999999999999999999999999999999999999987 5
Q ss_pred HHHHHHhhccccccc
Q 011349 472 QETLKDGTNLEAKKH 486 (488)
Q Consensus 472 ~~~~~~al~l~p~~~ 486 (488)
.++++++++++|+.+
T Consensus 255 ~~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 255 NRYLSQLKDAHRSHP 269 (291)
T ss_dssp HHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhCCCCh
Confidence 688899999999864
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-11 Score=119.38 Aligned_cols=99 Identities=12% Similarity=0.022 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..|.++|.++++.|+|++|+..|++|++++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++..+++.+|.+
T Consensus 195 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 273 (336)
T 1p5q_A 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 273 (336)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 3678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHH-HHHHHHhhcc
Q 011349 462 LFGLGMNNDA-QETLKDGTNL 481 (488)
Q Consensus 462 ~~~~~~~~~A-~~~~~~al~l 481 (488)
+..+|++++| .+.|++.++.
T Consensus 274 ~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 274 QQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 5577776643
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-11 Score=117.53 Aligned_cols=106 Identities=8% Similarity=-0.173 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC-----chHHHhcHHHHHHhh-CCHHHHHHHHHHHHHhCCCC---
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLS-DMPQEALGDAMQAQVISPDW--- 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~l~p~~--- 451 (488)
..+.++.+.|.++...|+|++|+.+|++|+++.|.. ...++.++|.+|... |++++|+.+|++|+++.|+.
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 457899999999999999999999999999887641 146899999999996 99999999999999999865
Q ss_pred ---HHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 452 ---PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 452 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..++.++|.++..+|+|++|++.|+++++++|+..
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 57899999999999999999999999999998753
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.26 E-value=5e-11 Score=115.30 Aligned_cols=105 Identities=15% Similarity=0.208 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch----HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
.........|..++..|++++|+..|+++++.+|+ +. .++.++|.++...|++++|+..++++++++|+++.+|+
T Consensus 232 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 310 (359)
T 3ieg_A 232 KKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALK 310 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHH
Confidence 34445667799999999999999999999999998 66 34677999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+|.++..+|++++|++.|+++++++|++.
T Consensus 311 ~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~ 340 (359)
T 3ieg_A 311 DRAEAYLIEEMYDEAIQDYEAAQEHNENDQ 340 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 999999999999999999999999999864
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2.5e-11 Score=126.43 Aligned_cols=104 Identities=17% Similarity=0.051 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..++.+|..++..|+|++|++.|++|++++|+ +..++.++|.+|..+|++++|++.|+++++++|+++.+|+++|.
T Consensus 21 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~ 99 (568)
T 2vsy_A 21 QDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGH 99 (568)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+|++++|++.|+++++++|+.
T Consensus 100 ~~~~~g~~~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 100 ALEDAGQAEAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999975
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.4e-11 Score=115.05 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..+...|..+...|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 249 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVS 249 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 5678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+..+|++++|++.|+++++++|+
T Consensus 250 ~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 250 YSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHhccHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999997
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.7e-11 Score=117.39 Aligned_cols=105 Identities=14% Similarity=0.102 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccC---------CCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGG---------TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~---------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~ 451 (488)
.++..+...|..++..|++++|+..|+++++.. |. ...++.++|.+|..+|++++|+..++++++++|++
T Consensus 191 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 269 (330)
T 3hym_B 191 EDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQN 269 (330)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred CChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccc
Confidence 456789999999999999999999999999876 55 67899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+|+.+|.++..+|++++|++.|+++++++|++.
T Consensus 270 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 304 (330)
T 3hym_B 270 ASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDT 304 (330)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCch
Confidence 99999999999999999999999999999999754
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.3e-11 Score=107.69 Aligned_cols=100 Identities=12% Similarity=0.019 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHhc-CChHHHHHHHHHhhc--cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRA-KDFPTAIECYTHFID--GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 383 ~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~--~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
+..+...|..++.. |++++|+..|+++++ .+|. ...++.++|.++...|++++|+..++++++.+|+++.+++.+|
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 154 (225)
T 2vq2_A 76 AEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELA 154 (225)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHH
Confidence 44555666666666 666666666666666 4444 4555666666666666666666666666666666666666666
Q ss_pred HHHHhCCChHHHHHHHHHhhcccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
.++..+|++++|++.|+++++++|
T Consensus 155 ~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 155 RTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCC
Confidence 666666666666666666666655
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1.9e-11 Score=111.24 Aligned_cols=102 Identities=16% Similarity=0.069 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchH---HHhcHHHHHHh------------------hCCHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT---VFARRCLCYLL------------------SDMPQEALGDA 441 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~---~~~~~a~~~~~------------------~~~~~~A~~~~ 441 (488)
..+++.+|.++++.|+|++|+..|+++++.+|+ ++. +++.+|.++.. .|++++|+..|
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 468899999999999999999999999999998 553 78889999886 57899999999
Q ss_pred HHHHHhCCCCHHHH-----------------HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 442 MQAQVISPDWPTAF-----------------YLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 442 ~~al~l~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+++++.+|+++.++ +.+|.+|+.+|++++|+..|+++++..|+.
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC
Confidence 99999999998665 678999999999999999999999999875
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=101.21 Aligned_cols=70 Identities=10% Similarity=-0.046 Sum_probs=66.8
Q ss_pred chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 417 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+.++.++|.++++.|+|++|+.+|++||+++|+++.+|+++|.+|..+|++++|+++|++|++++|+..
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 5678899999999999999999999999999999999999999999999999999999999999999754
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.24 E-value=3.6e-11 Score=102.88 Aligned_cols=101 Identities=14% Similarity=0.013 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH-
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA- 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g- 459 (488)
.++..+...|.+++..|+|++|+..|+++++++|. ++.++.++|.++..+|++++|+..++++++++|++..++..++
T Consensus 45 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~ 123 (166)
T 1a17_A 45 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 123 (166)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45788999999999999999999999999999999 9999999999999999999999999999999999999985554
Q ss_pred -HHHHhCCChHHHHHHHHHhhccc
Q 011349 460 -AALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 460 -~~~~~~~~~~~A~~~~~~al~l~ 482 (488)
..+..+|++++|++.+.++..+-
T Consensus 124 ~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 124 CNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccchHHHh
Confidence 45889999999999999887653
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=6.1e-11 Score=110.43 Aligned_cols=103 Identities=14% Similarity=0.084 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH---------
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP--------- 452 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~--------- 452 (488)
++..+...|..+...|+|++|+..|+++++++|+ +..++.++|.+|..+|++++|+..++++++++|++.
T Consensus 76 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 76 MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4567888888888888888888888888888888 888888888888888888888888888888888764
Q ss_pred -------------------------------------------------------------HHHHHHHHHHHhCCChHHH
Q 011349 453 -------------------------------------------------------------TAFYLQAAALFGLGMNNDA 471 (488)
Q Consensus 453 -------------------------------------------------------------~a~~~~g~~~~~~~~~~~A 471 (488)
.+|+.+|.++..+|++++|
T Consensus 155 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 234 (275)
T 1xnf_A 155 EQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSA 234 (275)
T ss_dssp HHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHH
Confidence 6677888888888888888
Q ss_pred HHHHHHhhcccccc
Q 011349 472 QETLKDGTNLEAKK 485 (488)
Q Consensus 472 ~~~~~~al~l~p~~ 485 (488)
+..|+++++++|+.
T Consensus 235 ~~~~~~al~~~p~~ 248 (275)
T 1xnf_A 235 TALFKLAVANNVHN 248 (275)
T ss_dssp HHHHHHHHTTCCTT
T ss_pred HHHHHHHHhCCchh
Confidence 88888888888854
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.23 E-value=6e-11 Score=113.34 Aligned_cols=104 Identities=11% Similarity=0.018 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..++.+|..++..|+|++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 98 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 98 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHH
Confidence 4557889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+..+|++++|++.|+++++++|+..
T Consensus 99 ~~~~~~~~~A~~~~~~~~~~~~~~~ 123 (327)
T 3cv0_A 99 HTNEHNANAALASLRAWLLSQPQYE 123 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCccH
Confidence 9999999999999999999999754
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.3e-12 Score=110.58 Aligned_cols=97 Identities=9% Similarity=0.060 Sum_probs=86.5
Q ss_pred HHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHhCCC
Q 011349 389 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA-LFGLGM 467 (488)
Q Consensus 389 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~~~~~~ 467 (488)
.+..+...|+|++|+..|+++++.+|+ ++.++..+|.+|...|++++|+..|+++++++|+++.+++.+|.+ +...|+
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~ 94 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQ 94 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTT
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCC
Confidence 345567889999999999999999999 999999999999999999999999999999999999999999999 789999
Q ss_pred h--HHHHHHHHHhhccccccc
Q 011349 468 N--NDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 468 ~--~~A~~~~~~al~l~p~~~ 486 (488)
+ ++|+..|+++++++|+..
T Consensus 95 ~~~~~A~~~~~~al~~~p~~~ 115 (177)
T 2e2e_A 95 HMTAQTRAMIDKALALDSNEI 115 (177)
T ss_dssp CCCHHHHHHHHHHHHHCTTCH
T ss_pred cchHHHHHHHHHHHHhCCCcH
Confidence 9 999999999999999753
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=5.8e-11 Score=113.60 Aligned_cols=103 Identities=16% Similarity=-0.015 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..|...|..+...|++++|+..|+++++.+|+ ...++.++|.+|...|++++|+..++++++++|+++.+++.+|.
T Consensus 123 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~ 201 (330)
T 3hym_B 123 TYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGV 201 (330)
T ss_dssp TCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 34566777777777777777777777777777777 66777777777777777777777777777777777777777777
Q ss_pred HHHhCCChHHHHHHHHHhhccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
++..+|++++|++.|++++++.|.
T Consensus 202 ~~~~~~~~~~A~~~~~~a~~~~~~ 225 (330)
T 3hym_B 202 VAFQNGEWKTAEKWFLDALEKIKA 225 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHcccHHHHHHHHHHHHHHhhh
Confidence 777777777777777777777654
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1.4e-11 Score=103.36 Aligned_cols=82 Identities=9% Similarity=-0.055 Sum_probs=75.9
Q ss_pred HHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 404 ECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 404 ~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
..|.++++++|+ +...++++|.++...|+|++|+..|+++++++|+++.+|+.+|.++..+|++++|++.|++|++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 578999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc
Q 011349 484 KKH 486 (488)
Q Consensus 484 ~~~ 486 (488)
++.
T Consensus 84 ~~~ 86 (142)
T 2xcb_A 84 NEP 86 (142)
T ss_dssp TCT
T ss_pred CCc
Confidence 864
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.22 E-value=9.3e-12 Score=126.57 Aligned_cols=104 Identities=14% Similarity=0.043 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+..+|.++++.|+|++|++.|++|++++|+ ++.+++++|.+|..+|++++|++.|++|++++|+++.+++.+|.
T Consensus 38 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~ 116 (477)
T 1wao_1 38 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 116 (477)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45789999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred H--HHhCCChHHHHHHHH-----------Hhhcccccc
Q 011349 461 A--LFGLGMNNDAQETLK-----------DGTNLEAKK 485 (488)
Q Consensus 461 ~--~~~~~~~~~A~~~~~-----------~al~l~p~~ 485 (488)
+ +..+|++++|++.++ ++++++|+.
T Consensus 117 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 117 CNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 9 889999999999999 888888864
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.20 E-value=6.9e-11 Score=112.05 Aligned_cols=105 Identities=10% Similarity=-0.074 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHH--HHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRC--LCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
.+...+..+|..+.+.|++++|+..|+++++.+|+ +.......+ ..+...|++++|+..|+++++.+|+++.+|+++
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 128 DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 45678999999999999999999999999999998 653332222 223345899999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|.++..+|++++|++.|+++++++|++.
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~ 234 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHP 234 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999864
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.3e-10 Score=116.73 Aligned_cols=104 Identities=15% Similarity=0.207 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch----HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
....+...|..++..|++++|+..|+++++++|+ ++ .++.++|.++.++|++++|+..++++++++|+++.+|+.
T Consensus 256 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~ 334 (450)
T 2y4t_A 256 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKD 334 (450)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 3445566799999999999999999999999998 64 478999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|.++..+|++++|++.|+++++++|+..
T Consensus 335 l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 363 (450)
T 2y4t_A 335 RAEAYLIEEMYDEAIQDYETAQEHNENDQ 363 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTSSSCH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCcchH
Confidence 99999999999999999999999999853
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.9e-10 Score=94.26 Aligned_cols=86 Identities=9% Similarity=-0.027 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..++..|++++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|++..+++.+|.
T Consensus 48 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 126 (133)
T 2lni_A 48 KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 126 (133)
T ss_dssp TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 45788999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCC
Q 011349 461 ALFGLGM 467 (488)
Q Consensus 461 ~~~~~~~ 467 (488)
++..+|+
T Consensus 127 ~~~~~~~ 133 (133)
T 2lni_A 127 CMMAQYN 133 (133)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 9988764
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.16 E-value=5.4e-11 Score=115.34 Aligned_cols=102 Identities=15% Similarity=0.010 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-H
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA-L 462 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~ 462 (488)
..|+++|.++++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+ .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 48899999999999999999999999999999 999999999999999999999999999999999999999999998 4
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
...++.++|.+.|++++..+|+..
T Consensus 310 ~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 310 QEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCC
Confidence 556788999999999999999754
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.4e-10 Score=118.27 Aligned_cols=105 Identities=5% Similarity=-0.128 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHHhcCC----------hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC--CHHHHHHHHHHHHHh
Q 011349 380 IQETLNSKKRGDAAFRAKD----------FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD--MPQEALGDAMQAQVI 447 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~l 447 (488)
.+...+|+.+|.+....|+ |++|+++|+++++.+|+ ++.+|++|+.++.+++ ++++|++++++++++
T Consensus 60 P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~ 138 (567)
T 1dce_A 60 PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEA 138 (567)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhh
Confidence 3667899999999999988 99999999999999999 9999999999999999 679999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCC-ChHHHHHHHHHhhcccccc
Q 011349 448 SPDWPTAFYLQAAALFGLG-MNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 448 ~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~p~~ 485 (488)
+|.+..||+.+|.++..+| .+++|+++++++++++|.+
T Consensus 139 d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n 177 (567)
T 1dce_A 139 DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 177 (567)
T ss_dssp CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCC
T ss_pred ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999 9999999999999999976
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.4e-10 Score=93.54 Aligned_cols=84 Identities=8% Similarity=-0.088 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
...+.++..+|.+++..|+|++|+..|+++++++|+ ++.+++++|.+|..+|++++|+..+++++++.|+++.......
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 467889999999999999999999999999999999 9999999999999999999999999999999999988765443
Q ss_pred HHHHh
Q 011349 460 AALFG 464 (488)
Q Consensus 460 ~~~~~ 464 (488)
.+...
T Consensus 103 ai~~~ 107 (117)
T 3k9i_A 103 AILFY 107 (117)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 33333
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-10 Score=117.82 Aligned_cols=102 Identities=12% Similarity=-0.007 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccC--------CCCchHHHhcHHHHHHhhC--CHHHHHHHHHHHHHhCCCCH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGG--------TMVSPTVFARRCLCYLLSD--MPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~l~p~~~ 452 (488)
+..|.+.|.+++..|+|++|+..|++++++. +. .+.++.++|.++...| +|++|+.+|++|++++|+++
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~ 172 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE-SPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNP 172 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh-hHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCH
Confidence 3455666666666666666666666666432 22 3455666665555443 46666666666666666666
Q ss_pred HHHHHHHHHHH---hCCChHHHHHHHHHhhcccccc
Q 011349 453 TAFYLQAAALF---GLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 453 ~a~~~~g~~~~---~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++++.+|.+++ ..+++++|++.|++|++++|+.
T Consensus 173 ~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~ 208 (472)
T 4g1t_A 173 EFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDN 208 (472)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcc
Confidence 66666666543 3455566666666666666654
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.9e-10 Score=118.08 Aligned_cols=105 Identities=14% Similarity=0.058 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..+...|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++.+++.+|.
T Consensus 308 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 386 (537)
T 3fp2_A 308 EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAE 386 (537)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 45778999999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|+++++++|+..
T Consensus 387 ~~~~~g~~~~A~~~~~~a~~~~~~~~ 412 (537)
T 3fp2_A 387 ILTDRGDFDTAIKQYDIAKRLEEVQE 412 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHhCCHHHHHHHHHHHHHcCCcch
Confidence 99999999999999999999998754
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.5e-09 Score=102.93 Aligned_cols=104 Identities=8% Similarity=-0.029 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHhcC--ChHHHHHHHHHhhccCCCCchHHHhcHHHHH----Hhh---CCHHHHHHHHHHHHHhCCCC
Q 011349 381 QETLNSKKRGDAAFRAK--DFPTAIECYTHFIDGGTMVSPTVFARRCLCY----LLS---DMPQEALGDAMQAQVISPDW 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~----~~~---~~~~~A~~~~~~al~l~p~~ 451 (488)
+...+|+.+|.+....| ++++|+.+++++|..+|+ +..+|+.|+.++ ..+ ++++++++.++++++.+|.+
T Consensus 65 ~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkn 143 (306)
T 3dra_A 65 SHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKN 143 (306)
T ss_dssp TCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCC
Confidence 56789999999999999 999999999999999999 999999999999 777 78999999999999999999
Q ss_pred HHHHHHHHHHHHhCCChH--HHHHHHHHhhcccccc
Q 011349 452 PTAFYLQAAALFGLGMNN--DAQETLKDGTNLEAKK 485 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~--~A~~~~~~al~l~p~~ 485 (488)
..+|+.++.++..+|+++ ++++.++++++.||.+
T Consensus 144 y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N 179 (306)
T 3dra_A 144 HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKN 179 (306)
T ss_dssp HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCC
Confidence 999999999999999999 9999999999999975
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.1e-11 Score=118.43 Aligned_cols=183 Identities=15% Similarity=0.091 Sum_probs=123.1
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCC--CcccccceecCC---eeeEEEecC
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SER--LVNLIGCCCEGE---ERLLVAEFM 132 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~ 132 (488)
++.++.|..+.||+.. ..+++|+.... .....+.+|+.+|+.+. +.. +++++..+...+ ..|+||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4567899999999763 45889986432 23467899999999984 333 445555443332 358999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG---------------------------------------- 172 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------- 172 (488)
+|.+|.+... ..++..++..++.+++..|..||+..
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988875432 24778888889999999999998610
Q ss_pred -----------------CcccccccCCceeecC--CCCCeeccCCCcccCCCCCccccccCC---CCcccccc-----C-
Q 011349 173 -----------------RALYHDLNTYRILFDQ--DGNPRLSCFGLMKNSRDGKSYSTNLAF---TPPEYLRT-----G- 224 (488)
Q Consensus 173 -----------------~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~t~~y---~aPE~~~~-----~- 224 (488)
.++|+|++|.||++++ +..+.|+||+.+..............+ ..|+.... +
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1699999999999997 456789999988654332111111111 22222111 0
Q ss_pred --------CcccCCceEeehHHHHHHhhCCCCCCc
Q 011349 225 --------RVIPESVVYSFGTLLLDLLSGKHIPPS 251 (488)
Q Consensus 225 --------~~~~~sDv~slG~il~el~tg~~p~~~ 251 (488)
......+.|++|.++|.+.+|..++..
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 011225789999999999999866543
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-10 Score=110.48 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC---
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDG------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--- 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--- 451 (488)
..+..+...|.++...|+|++|+..|++|++. ++.....+++|+|.+|.++|+|++|+..+++|+++.++.
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH
Confidence 34668999999999999999999999999942 222245689999999999999999999999999987554
Q ss_pred ---HHHHHHHHHHHHhCCC-hHHHHHHHHHhhcccc
Q 011349 452 ---PTAFYLQAAALFGLGM-NNDAQETLKDGTNLEA 483 (488)
Q Consensus 452 ---~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~p 483 (488)
+.+|+++|.++..+|+ +++|+++|++|+++..
T Consensus 233 ~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 8899999999999995 6999999999998743
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.12 E-value=5.5e-10 Score=90.86 Aligned_cols=88 Identities=16% Similarity=0.035 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..++..|++++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|++..+++.+|.
T Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 122 (131)
T 2vyi_A 44 ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKI 122 (131)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 45778999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhCCChH
Q 011349 461 ALFGLGMNN 469 (488)
Q Consensus 461 ~~~~~~~~~ 469 (488)
++..+|+++
T Consensus 123 ~~~~~~~~~ 131 (131)
T 2vyi_A 123 AELKLREAP 131 (131)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHhcCC
Confidence 999998863
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.5e-10 Score=102.84 Aligned_cols=97 Identities=11% Similarity=0.060 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
...+..+|.+++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 568899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHH-HHHHHhhc
Q 011349 463 FGLGMNNDAQ-ETLKDGTN 480 (488)
Q Consensus 463 ~~~~~~~~A~-~~~~~al~ 480 (488)
..+++++++. ..|.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999888 55555544
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.3e-10 Score=117.41 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..|+++|.++++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|+|++|+.+|++|++++|++..+++.+|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 678999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHHHHH
Q 011349 463 FGLGMNNDAQET 474 (488)
Q Consensus 463 ~~~~~~~~A~~~ 474 (488)
..++++++|...
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998754
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.10 E-value=9.1e-11 Score=98.85 Aligned_cols=77 Identities=9% Similarity=0.005 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhcc-------CCCCchHHH----hcHHHHHHhhCCHHHHHHHHHHHHHhCCC
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDG-------GTMVSPTVF----ARRCLCYLLSDMPQEALGDAMQAQVISPD 450 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-------~p~~~~~~~----~~~a~~~~~~~~~~~A~~~~~~al~l~p~ 450 (488)
++..|.++|.++.+.|+|++|+.+|++||++ +|+ +..+| +++|.++..+|++++|+.+|++|++++|+
T Consensus 56 ~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd-~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 56 DAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD-EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc-hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 4569999999999999999999999999999 999 99999 99999999999999999999999999999
Q ss_pred CHHHHHHHH
Q 011349 451 WPTAFYLQA 459 (488)
Q Consensus 451 ~~~a~~~~g 459 (488)
+...+-.+.
T Consensus 135 d~~~~~~~~ 143 (159)
T 2hr2_A 135 RKGETPGKE 143 (159)
T ss_dssp CCSCCTTHH
T ss_pred cHHHHHHHH
Confidence 865544433
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.9e-10 Score=98.77 Aligned_cols=83 Identities=8% Similarity=-0.124 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..|+.+|.+++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+.+|+++++++|++..+|+++|.
T Consensus 43 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l 121 (164)
T 3sz7_A 43 ANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGL 121 (164)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 46789999999999999999999999999999999 99999999999999999999999999999999999999999988
Q ss_pred HHHh
Q 011349 461 ALFG 464 (488)
Q Consensus 461 ~~~~ 464 (488)
+...
T Consensus 122 ~~~~ 125 (164)
T 3sz7_A 122 ETTK 125 (164)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.10 E-value=3.1e-10 Score=108.37 Aligned_cols=104 Identities=10% Similarity=-0.023 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchH-HHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT-VFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
+.+..|...|..+.+.|++++|+..|+++++++|. ++. +|.++|.++...|++++|+..|++|++++|....+|...|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a 175 (308)
T 2ond_A 97 KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAA 175 (308)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 34456666666666666666666666666666666 544 6666666666666666666666666666666666665554
Q ss_pred HHHH-hCCChHHHHHHHHHhhcccccc
Q 011349 460 AALF-GLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 460 ~~~~-~~~~~~~A~~~~~~al~l~p~~ 485 (488)
...+ .+|++++|++.|++|++++|+.
T Consensus 176 ~~~~~~~~~~~~A~~~~~~al~~~p~~ 202 (308)
T 2ond_A 176 LMEYYCSKDKSVAFKIFELGLKKYGDI 202 (308)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 4433 2566666666666666666653
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.4e-10 Score=118.06 Aligned_cols=105 Identities=16% Similarity=0.116 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhcc------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDG------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 455 (488)
++..|...|..+.+.|++++|++.|+++++. +|+....+|.++|.+|.+.|++++|++.++++++++|+++.+|
T Consensus 474 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 553 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVH 553 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 4677889999999999999999999999987 6652277899999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 456 YLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 456 ~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+|.+|..+|++++|++.|+++++++|++.
T Consensus 554 ~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~ 584 (597)
T 2xpi_A 554 TAIALVYLHKKIPGLAITHLHESLAISPNEI 584 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999999999999999763
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.8e-10 Score=90.27 Aligned_cols=69 Identities=17% Similarity=0.133 Sum_probs=66.5
Q ss_pred chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 417 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+.++|.++...|+|++|+..|+++++++|+++.+|+++|.++..+|++++|++.|+++++++|+.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 567889999999999999999999999999999999999999999999999999999999999999986
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.3e-10 Score=108.38 Aligned_cols=104 Identities=11% Similarity=-0.048 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc--------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh----
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---- 447 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---- 447 (488)
...+..+...|..+...|++++|+..|.+++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 456789999999999999999999999999987 466 7889999999999999999999999999999
Q ss_pred ----CCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 448 ----SPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 448 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.|....+++++|.++..+|++++|++.|++++++.|+
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999988654
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.8e-10 Score=109.98 Aligned_cols=104 Identities=9% Similarity=0.008 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC-----chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 451 (488)
..+..+.+.|.++.. |+|++|+..|++|+++.|.. ...++.++|.+|..+|+|++|+..|++++++.|++
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 456788999999999 99999999999999887641 15689999999999999999999999999997755
Q ss_pred --HHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 452 --PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 452 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+++++|.++..+|++++|+.+|++++ ++|+..
T Consensus 193 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 3588999999999999999999999999 999753
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.7e-10 Score=97.03 Aligned_cols=75 Identities=15% Similarity=-0.042 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHHHHhcCCh----------HHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC-----------CHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDF----------PTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-----------MPQEA 437 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~----------~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-----------~~~~A 437 (488)
..+++.+|.+.|.++.+.+++ ++|+..|++||+++|+ ...+|+++|.+|..+| ++++|
T Consensus 32 ~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA 110 (158)
T 1zu2_A 32 NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLA 110 (158)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHHH
Confidence 346788999999999999876 5999999999999999 9999999999999885 89999
Q ss_pred HHHHHHHHHhCCCCHHH
Q 011349 438 LGDAMQAQVISPDWPTA 454 (488)
Q Consensus 438 ~~~~~~al~l~p~~~~a 454 (488)
+++|++|++++|++...
T Consensus 111 ~~~~~kAl~l~P~~~~y 127 (158)
T 1zu2_A 111 TQFFQQAVDEQPDNTHY 127 (158)
T ss_dssp HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhCCCCHHH
Confidence 99999999999998644
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.3e-10 Score=99.64 Aligned_cols=88 Identities=10% Similarity=-0.051 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH-HHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP-TAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-~a~~~~g 459 (488)
..+..|.++|.+++..|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++ .+...++
T Consensus 61 ~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~ 139 (162)
T 3rkv_A 61 KNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMK 139 (162)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 999999999999999999999999999999999998 5677777
Q ss_pred HHHHhCCChH
Q 011349 460 AALFGLGMNN 469 (488)
Q Consensus 460 ~~~~~~~~~~ 469 (488)
.+...++++.
T Consensus 140 ~~~~~~~~~~ 149 (162)
T 3rkv_A 140 IVTERRAEKK 149 (162)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 7766554443
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.09 E-value=4.2e-10 Score=97.92 Aligned_cols=85 Identities=9% Similarity=-0.030 Sum_probs=78.8
Q ss_pred hcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHhCCChHHHH
Q 011349 395 RAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQAAALFGLGMNNDAQ 472 (488)
Q Consensus 395 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~~~~~~~~~A~ 472 (488)
..++..+|+..|+++++.+|+ ++.+++++|.++...|++++|+..|+++++++|++ +.+++++|.++..+|++++|+
T Consensus 86 ~~~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~ 164 (176)
T 2r5s_A 86 QQAAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIA 164 (176)
T ss_dssp HHHTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHH
T ss_pred hhcccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHH
Confidence 334556789999999999999 99999999999999999999999999999999987 669999999999999999999
Q ss_pred HHHHHhhc
Q 011349 473 ETLKDGTN 480 (488)
Q Consensus 473 ~~~~~al~ 480 (488)
..|+++|.
T Consensus 165 ~~y~~al~ 172 (176)
T 2r5s_A 165 SKYRRQLY 172 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999974
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.2e-10 Score=92.58 Aligned_cols=84 Identities=15% Similarity=0.059 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC------CCCHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS------PDWPTA 454 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~------p~~~~a 454 (488)
.++..|..+|.+++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+.+|+++++++ |++..+
T Consensus 36 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 36 EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred CChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 45789999999999999999999999999999999 99999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhC
Q 011349 455 FYLQAAALFGL 465 (488)
Q Consensus 455 ~~~~g~~~~~~ 465 (488)
+..++.+...+
T Consensus 115 ~~~l~~~~~~l 125 (126)
T 3upv_A 115 DQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99998887654
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.1e-10 Score=106.80 Aligned_cols=101 Identities=10% Similarity=-0.028 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc--------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh----
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---- 447 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---- 447 (488)
...+..+...|..++..|+|++|+..|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999977 355 6788999999999999999999999999998
Q ss_pred ----CCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 448 ----SPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 448 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
+|....+++++|.++..+|++++|++.|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999988
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-10 Score=119.77 Aligned_cols=107 Identities=10% Similarity=0.044 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC-CHHHHHHHHHHHHHhCCCCHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAK--DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-MPQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~l~p~~~~a~ 455 (488)
..++..+|+.+|.+..+.+ +|++|+++++++++++|+ +..+|++|+.++..+| .+++|+++++++|+++|++..||
T Consensus 103 ~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW 181 (567)
T 1dce_A 103 NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSW 181 (567)
T ss_dssp CTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHH
Confidence 3477889999999999999 779999999999999999 9999999999999999 89999999999999999999999
Q ss_pred HHHHHHHHhC--------------CChHHHHHHHHHhhccccccc
Q 011349 456 YLQAAALFGL--------------GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 456 ~~~g~~~~~~--------------~~~~~A~~~~~~al~l~p~~~ 486 (488)
+++|.++..+ +++++|++++++|++++|++.
T Consensus 182 ~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~ 226 (567)
T 1dce_A 182 HYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 226 (567)
T ss_dssp HHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred HHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCc
Confidence 9999999886 568999999999999999864
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.2e-10 Score=107.48 Aligned_cols=101 Identities=12% Similarity=0.090 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhh---ccCCCCch----HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC----
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFI---DGGTMVSP----TVFARRCLCYLLSDMPQEALGDAMQAQVISPD---- 450 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai---~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~---- 450 (488)
.+.++...|..++..|+|++|+..|++|+ +..|+ .. .+++|+|.+|..+|+|++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 46789999999999999999999999999 44554 32 68999999999999999999999999988644
Q ss_pred --CHHHHHHHHHHHHhCCChHHH-HHHHHHhhcccc
Q 011349 451 --WPTAFYLQAAALFGLGMNNDA-QETLKDGTNLEA 483 (488)
Q Consensus 451 --~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~l~p 483 (488)
.+.+|+++|.++..+|++++| ..+|++|+.+..
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~ 268 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 278999999999999999999 788999987643
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.5e-10 Score=96.56 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC-----chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC------H
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW------P 452 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~------~ 452 (488)
..+...|..++..|+|++|+..|++++++.+.. ...++.++|.++..+|++++|+..+++++++.+.. +
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 477888888888888888888888888764431 14567888888888888888888888888775443 4
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 453 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 453 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+++.+|.++..+|++++|++.+++++++..+
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 57888888888888888888888888877654
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.07 E-value=4.5e-10 Score=110.15 Aligned_cols=94 Identities=14% Similarity=0.095 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
...+..|.++|.++++.|+|++|+..|++|++++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++
T Consensus 270 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~ 348 (370)
T 1ihg_A 270 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELL 348 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 356789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHH
Q 011349 460 AALFGLGMNNDAQET 474 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~ 474 (488)
.++..++++++|...
T Consensus 349 ~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 349 KVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988754
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.07 E-value=3.9e-10 Score=85.91 Aligned_cols=74 Identities=18% Similarity=0.174 Sum_probs=67.9
Q ss_pred CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 413 GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 413 ~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+|.....+++++|.++...|++++|+..|+++++++|+++.+++++|.++..+|++++|++.|+++++++|+..
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 77 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH
Confidence 44436788999999999999999999999999999999999999999999999999999999999999999753
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-09 Score=103.51 Aligned_cols=103 Identities=9% Similarity=-0.027 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC-----chHHHhcHHHHHHhhCCHHHHHHHHHHHH---HhCCCCH-
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLSDMPQEALGDAMQAQ---VISPDWP- 452 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al---~l~p~~~- 452 (488)
....++..|..+...|+|++|+..|++|++..+.. ...+++++|.+|..+|+|++|+..|++|+ +..|++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~ 193 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcccc
Confidence 34556778999999999999999999999865541 15689999999999999999999999999 5567643
Q ss_pred ---HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 453 ---TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 453 ---~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+++++|.+|..+|+|++|++.|++|+++.++
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999999999998754
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.06 E-value=5.5e-10 Score=105.74 Aligned_cols=104 Identities=11% Similarity=-0.018 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc--------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh----
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---- 447 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---- 447 (488)
...+..+...|..++..|++++|+..|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 456788999999999999999999999999987 666 7788999999999999999999999999984
Q ss_pred ---------------------------------------------CCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccc
Q 011349 448 ---------------------------------------------SPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 448 ---------------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 482 (488)
+|..+.+++.+|.+|..+|++++|++.|++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57778999999999999999999999999999998
Q ss_pred cc
Q 011349 483 AK 484 (488)
Q Consensus 483 p~ 484 (488)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 85
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.05 E-value=4.2e-10 Score=88.06 Aligned_cols=83 Identities=7% Similarity=0.075 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC--HHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQ 458 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~ 458 (488)
+++..++.+|.+++..|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|++.|++++++.|+. ..+...+
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l 83 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSEL 83 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999998754 3333444
Q ss_pred HHHHHh
Q 011349 459 AAALFG 464 (488)
Q Consensus 459 g~~~~~ 464 (488)
...+..
T Consensus 84 ~~~l~~ 89 (100)
T 3ma5_A 84 QDAKLK 89 (100)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.9e-10 Score=115.90 Aligned_cols=105 Identities=12% Similarity=0.013 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchH------HHhcHHHHHHh---hCCHHHHHHHHHHHHHhCCCC
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT------VFARRCLCYLL---SDMPQEALGDAMQAQVISPDW 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~a~~~~~---~~~~~~A~~~~~~al~l~p~~ 451 (488)
.++..+...|..++..|++++|+..|+++++.+|+ +.. ++.++|.++.. .|++++|+..++++++++|++
T Consensus 370 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 448 (514)
T 2gw1_A 370 EAPEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRS 448 (514)
T ss_dssp TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTC
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCccc
Confidence 34678889999999999999999999999999888 644 89999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+++.+|.++..+|++++|++.|+++++++|+..
T Consensus 449 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 483 (514)
T 2gw1_A 449 EQAKIGLAQMKLQQEDIDEAITLFEESADLARTME 483 (514)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccH
Confidence 99999999999999999999999999999999753
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.05 E-value=7.5e-10 Score=105.70 Aligned_cols=101 Identities=12% Similarity=-0.023 Sum_probs=91.7
Q ss_pred HH-HHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHH-hhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 383 TL-NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYL-LSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 383 ~~-~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
+. .|...|..+.+.|++++|+..|++|++.+|. ...+|...+.... ..|++++|+..|+++++++|+++.+|..+|.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 211 (308)
T 2ond_A 133 PTLVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYID 211 (308)
T ss_dssp THHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 44 8999999999999999999999999999998 7888876665543 3799999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcc---ccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNL---EAK 484 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l---~p~ 484 (488)
.+..+|++++|+..|++|++. +|+
T Consensus 212 ~~~~~g~~~~A~~~~~~al~~~~l~p~ 238 (308)
T 2ond_A 212 YLSHLNEDNNTRVLFERVLTSGSLPPE 238 (308)
T ss_dssp HHHTTCCHHHHHHHHHHHHHSSSSCGG
T ss_pred HHHHCCCHHHHHHHHHHHHhccCCCHH
Confidence 999999999999999999995 664
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.04 E-value=2e-10 Score=109.71 Aligned_cols=104 Identities=10% Similarity=-0.044 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC-----CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM-----VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 451 (488)
..+..+.+.|.++...|+|++|+.+|++|+++.+. ....++.++|.+|.. |++++|+.+|++|+++.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 45778999999999999999999999999987432 124688999999999 99999999999999998764
Q ss_pred --HHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 452 --PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 452 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
..+++++|.+|..+|+|++|++.|++++++.|+.
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999987754
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.03 E-value=8.7e-10 Score=102.32 Aligned_cols=103 Identities=10% Similarity=-0.105 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC-CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC--CC-CHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM-VSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS--PD-WPTAFY 456 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~--p~-~~~a~~ 456 (488)
.+. ..+.+|..+++.++|++|+..|++++...+. ....+++++|.++..+|++++|+..|++++.-. |. .+++++
T Consensus 134 ~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~ 212 (282)
T 4f3v_A 134 EHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAW 212 (282)
T ss_dssp HHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHH
T ss_pred chH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHH
Confidence 445 8899999999999999999999999886432 114589999999999999999999999999655 66 678999
Q ss_pred HHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 457 LQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 457 ~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
++|.++..+|+.++|.+.|++++..+|+
T Consensus 213 ~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 213 YLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999997
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.03 E-value=7.8e-10 Score=104.82 Aligned_cols=106 Identities=10% Similarity=-0.058 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHH----Hhc---CChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHH--HHHHHHHHHHHhCCC
Q 011349 380 IQETLNSKKRGDAA----FRA---KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQ--EALGDAMQAQVISPD 450 (488)
Q Consensus 380 ~~~~~~~~~~g~~~----~~~---~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~--~A~~~~~~al~l~p~ 450 (488)
.+...+|+.++.+. ... +++++++++++++++.+|+ +..+|++|+.++..+|.++ ++++.++++|+.+|.
T Consensus 100 Pk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~ 178 (306)
T 3dra_A 100 EKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLK 178 (306)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTT
T ss_pred cccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCC
Confidence 35667888888888 666 7899999999999999999 9999999999999999998 999999999999999
Q ss_pred CHHHHHHHHHHHHhCCC------hHHHHHHHHHhhccccccc
Q 011349 451 WPTAFYLQAAALFGLGM------NNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 451 ~~~a~~~~g~~~~~~~~------~~~A~~~~~~al~l~p~~~ 486 (488)
|..||+.++.++..+++ ++++++++++++.++|++.
T Consensus 179 N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~ 220 (306)
T 3dra_A 179 NNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNP 220 (306)
T ss_dssp CHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCH
T ss_pred CHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999998 9999999999999999863
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.6e-10 Score=109.91 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=94.4
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC-----chHHHhcHHHHHHhhCCHHHHHHHHHHHHH-----hC
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLLSDMPQEALGDAMQAQV-----IS 448 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----l~ 448 (488)
....+..+...|.++...|+|++|+..|++|+++.+.. ...++.++|.+|..+|++++|+.++++|++ .+
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 34557789999999999999999999999999875531 225899999999999999999999999999 46
Q ss_pred -CCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 449 -PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 449 -p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
|..+.+++++|.++..+|++++|++.|++|+++.++
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 296 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQK 296 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999998553
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.02 E-value=4.9e-10 Score=106.13 Aligned_cols=103 Identities=8% Similarity=-0.062 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc-----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-------CCC
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS-----PTVFARRCLCYLLSDMPQEALGDAMQAQVI-------SPD 450 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-------~p~ 450 (488)
+..++..|..+...++|++|+..|++|+++.+... ..+++++|.+|..+|+|++|+..|++|+++ .+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 33455689999999999999999999998654412 237999999999999999999999999953 234
Q ss_pred CHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 451 WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 451 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+.+++++|.+|..+|+|++|++.+++|+++.++.
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 46689999999999999999999999999987654
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.01 E-value=5.7e-10 Score=90.73 Aligned_cols=68 Identities=15% Similarity=-0.056 Sum_probs=64.6
Q ss_pred HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 419 TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 419 ~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..++.+|.++...|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|++|++++|+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 85 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI 85 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 35778999999999999999999999999999999999999999999999999999999999999853
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=99.01 E-value=2.1e-09 Score=100.33 Aligned_cols=99 Identities=14% Similarity=0.067 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHh----cCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCC
Q 011349 380 IQETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDW 451 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~ 451 (488)
..++.+++..|..+.. .+++++|+..|++|++.+ ++.+++++|.+|.. .+++++|+..|++|+++ ++
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~ 109 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KY 109 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TC
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CC
Confidence 3567889999999999 999999999999999874 67788999999999 99999999999999998 48
Q ss_pred HHHHHHHHHHHHh----CCChHHHHHHHHHhhcccc
Q 011349 452 PTAFYLQAAALFG----LGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 452 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~p 483 (488)
+.+++++|.+|.. .+++++|++.|++|+++++
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 9999999999999 9999999999999998764
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=8.9e-10 Score=105.12 Aligned_cols=107 Identities=10% Similarity=0.051 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCC-HHHHHHHHHHHHHhCCCCHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAK--DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM-PQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~ 455 (488)
..++..+|..++.+....+ ++++++.+++++++.+|. +..+|++|+.+...+|. +++++++++++|+.+|.|..||
T Consensus 104 ~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW 182 (331)
T 3dss_A 104 NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSW 182 (331)
T ss_dssp CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHH
Confidence 4477889999999999998 499999999999999999 99999999999999999 6999999999999999999999
Q ss_pred HHHHHHHHhC--------------CChHHHHHHHHHhhccccccc
Q 011349 456 YLQAAALFGL--------------GMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 456 ~~~g~~~~~~--------------~~~~~A~~~~~~al~l~p~~~ 486 (488)
++++.++..+ +.++++++++++|+.++|++.
T Consensus 183 ~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 183 HYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 9999999887 568999999999999999864
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.1e-09 Score=86.41 Aligned_cols=72 Identities=13% Similarity=0.094 Sum_probs=69.4
Q ss_pred cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 412 GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 412 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
++|+ ++.++.++|.++...|++++|+..++++++++|+++.+++++|.++..+|++++|++.|+++++++|+
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 4677 88899999999999999999999999999999999999999999999999999999999999999997
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.7e-09 Score=112.74 Aligned_cols=102 Identities=10% Similarity=-0.142 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.+...|...|..+.+.|++++|++.|+++++.+|+ +..+|+.+|.+|.+.|++++|++.|+++++++|+++.+|+.+|.
T Consensus 405 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 483 (597)
T 2xpi_A 405 QFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGV 483 (597)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 35678999999999999999999999999999998 88999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p 483 (488)
++...|++++|++.|++++++.|
T Consensus 484 ~~~~~g~~~~A~~~~~~~~~~~~ 506 (597)
T 2xpi_A 484 VAFNKSDMQTAINHFQNALLLVK 506 (597)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhhh
Confidence 99999999999999999998844
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.99 E-value=3.4e-10 Score=106.67 Aligned_cols=102 Identities=9% Similarity=-0.014 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH-----HHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP-----TAF 455 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-----~a~ 455 (488)
.++..++.+|.+++..|+|++|+..|++|++++|+ +..+++++|.+|..+|++++|+..|+++++++|+++ .++
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~ 114 (281)
T 2c2l_A 36 LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIP 114 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHH
Confidence 46789999999999999999999999999999999 999999999999999999999999999999998762 111
Q ss_pred --------------------------HHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 456 --------------------------YLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 456 --------------------------~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
..++. +..|++++|++.|++|++++|++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~ 168 (281)
T 2c2l_A 115 SALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDD 168 (281)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccch
Confidence 11122 23689999999999999999974
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=107.76 Aligned_cols=104 Identities=12% Similarity=0.029 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCC-----CCchHHHhcHHHHHHhhCCHHHHHHHHHHHHH-----hCCC
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGT-----MVSPTVFARRCLCYLLSDMPQEALGDAMQAQV-----ISPD 450 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----l~p~ 450 (488)
..+..+...|.++...|+|++|++.|++|+++.+ .....+++++|.+|..+|++++|+..+++|++ .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 4578899999999999999999999999998632 11346899999999999999999999999999 8898
Q ss_pred CHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 451 WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 451 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+.+++++|.++..+|++++|++.|++|+++.++
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998654
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.99 E-value=7.7e-10 Score=97.97 Aligned_cols=106 Identities=12% Similarity=-0.049 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc---CCC---CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC--
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG---GTM---VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD-- 450 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~-- 450 (488)
....+..+...|..+...|++++|+..|++++++ .++ ....++.++|.++..+|++++|+..+++++++.+.
T Consensus 62 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 141 (203)
T 3gw4_A 62 HTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD 141 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc
Confidence 3456778889999999999999999999999877 332 13567888999999999999999999999876432
Q ss_pred C----HHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 451 W----PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 451 ~----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+ ..++.++|.++..+|++++|++.|++|+++-.+
T Consensus 142 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 142 DQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 2 235688899999999999999999999887554
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=108.49 Aligned_cols=102 Identities=13% Similarity=0.088 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch----HHHhcHHHHHHhhCCHHHHHHHHHHHHHh------CCC
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----TVFARRCLCYLLSDMPQEALGDAMQAQVI------SPD 450 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p~ 450 (488)
..+..+..+|..++..|+|++|+..|+++++++|+ +. .++.++|.+|..+|++++|+..+++++++ .|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 55678889999999999999999999999999998 65 58999999999999999999999999999 688
Q ss_pred CHHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 451 WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 451 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
.+.+++.+|.++..+|++++|++.|++++++.+
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 157 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLAR 157 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999998843
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.4e-09 Score=103.74 Aligned_cols=103 Identities=13% Similarity=0.099 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHh------CCCC
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS----PTVFARRCLCYLLSDMPQEALGDAMQAQVI------SPDW 451 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p~~ 451 (488)
....+...|..++..|+|++|+..|+++++.+|+ + ..++.++|.+|...|++++|+..+++++++ .|..
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 3567888999999999999999999999999998 6 468889999999999999999999999988 5667
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+.+++.+|.++..+|++++|++.|++++++.|+.
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 116 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 116 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999999987753
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.4e-09 Score=101.20 Aligned_cols=102 Identities=10% Similarity=-0.030 Sum_probs=93.4
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc--------CCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC--
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG--------GTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVIS-- 448 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~-- 448 (488)
....+..+...|..++..|++++|+..|++++++ .|. ...++.++|.+|..+|++++|+..+++++++.
T Consensus 65 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 65 HPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999999987 354 67889999999999999999999999999984
Q ss_pred ------CCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 449 ------PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 449 ------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
|....+++++|.++..+|++++|++.|++++++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 677889999999999999999999999999987
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=92.60 Aligned_cols=105 Identities=8% Similarity=0.011 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc-----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC---
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS-----PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--- 451 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--- 451 (488)
...+..+...|..++..|+|++|+..|++++++.+... ..++.++|.+|..+|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 45677899999999999999999999999998744311 2578999999999999999999999999987654
Q ss_pred ---HHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 452 ---PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 452 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
..+++++|.++..+|++++|++.+++++++.+.
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999987543
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.3e-09 Score=110.13 Aligned_cols=103 Identities=12% Similarity=0.014 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhh-------------------CCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS-------------------DMPQEALGDA 441 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-------------------~~~~~A~~~~ 441 (488)
..+..+...|..+...|++++|+..|++|++.+|+ ++.++.++|.+|... +.+++|+..+
T Consensus 245 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 323 (472)
T 4g1t_A 245 GVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHL 323 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHH
Confidence 45667888999999999999999999999999998 888888888887543 3467788888
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 442 MQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 442 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+++++++|+++.+++.+|.++..+|++++|++.|++|++++|+
T Consensus 324 ~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~ 366 (472)
T 4g1t_A 324 KKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELT 366 (472)
T ss_dssp HHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC
T ss_pred HHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 8888888888888888888888888888888888888887765
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.97 E-value=8.2e-10 Score=108.73 Aligned_cols=103 Identities=10% Similarity=-0.022 Sum_probs=91.7
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC------chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV------SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 452 (488)
....+..++..|..++..|++++|+..|++|+++.+.. ...+++++|.+|..+|++++|+..+++|+++.|...
T Consensus 139 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 218 (383)
T 3ulq_A 139 RIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK 218 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 44578899999999999999999999999999874431 346899999999999999999999999999866543
Q ss_pred ------HHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 453 ------TAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 453 ------~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
.+++++|.++..+|++++|+++|++|+++
T Consensus 219 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 253 (383)
T 3ulq_A 219 QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAV 253 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 58999999999999999999999999995
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-09 Score=107.21 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHh------CCCCH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS----PTVFARRCLCYLLSDMPQEALGDAMQAQVI------SPDWP 452 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p~~~ 452 (488)
+..+..+|..++..|+|++|+..|+++++++|. + ..++.++|.+|...|++++|+..+++++++ .|..+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 567889999999999999999999999999998 5 368999999999999999999999999988 56668
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 453 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 453 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+++.+|.++..+|++++|++.|++++++.|+.
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 120 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISREL 120 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999987754
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.8e-09 Score=102.03 Aligned_cols=97 Identities=8% Similarity=-0.066 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC--HHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQAA 460 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~ 460 (488)
.......+..+.+.+++++|+..|+++++.+|+ +..+++++|.+|...|++++|+..|.++++++|++ ..++.++|.
T Consensus 185 ~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~ 263 (287)
T 3qou_A 185 RYQGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQE 263 (287)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHH
Confidence 345566777788999999999999999999999 99999999999999999999999999999999999 999999999
Q ss_pred HHHhCCChHHHHHHHHHhhc
Q 011349 461 ALFGLGMNNDAQETLKDGTN 480 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~ 480 (488)
++..+|+.++|...|++++.
T Consensus 264 ~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 264 ILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHcCCCCcHHHHHHHHHH
Confidence 99999999999999999985
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=4.2e-09 Score=100.96 Aligned_cols=106 Identities=8% Similarity=-0.045 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhh-C-CHHHHHHHHHHHHHhCCCCHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAK-DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS-D-MPQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-~-~~~~A~~~~~~al~l~p~~~~a~ 455 (488)
..+...+|..++.+....| ++++|+.+++++|+.+|+ +..+|+.|+.++..+ + +++++++.++++++++|.|..||
T Consensus 84 nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW 162 (349)
T 3q7a_A 84 NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTW 162 (349)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHH
T ss_pred CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHH
Confidence 3366789999999999999 599999999999999999 999999999999998 8 89999999999999999999999
Q ss_pred HHHHHHHHhCCChH--------HHHHHHHHhhcccccc
Q 011349 456 YLQAAALFGLGMNN--------DAQETLKDGTNLEAKK 485 (488)
Q Consensus 456 ~~~g~~~~~~~~~~--------~A~~~~~~al~l~p~~ 485 (488)
+.++.++..+|+++ ++++.++++++.||.+
T Consensus 163 ~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N 200 (349)
T 3q7a_A 163 AYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRN 200 (349)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCC
Confidence 99999999999998 9999999999999975
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=5.7e-09 Score=99.54 Aligned_cols=105 Identities=5% Similarity=-0.119 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHhcCC----------hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCC--HHHHHHHHHHHHHhC
Q 011349 381 QETLNSKKRGDAAFRAKD----------FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM--PQEALGDAMQAQVIS 448 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~al~l~ 448 (488)
+...+|..++.+....++ +++++.++++++..+|+ ++.+|+.|+.++..+++ ++++++.++++++++
T Consensus 62 ~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~d 140 (331)
T 3dss_A 62 DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEAD 140 (331)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhC
Confidence 667889999998887766 79999999999999999 99999999999999994 899999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCC-hHHHHHHHHHhhccccccc
Q 011349 449 PDWPTAFYLQAAALFGLGM-NNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 449 p~~~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~p~~~ 486 (488)
|.|..||+.++.++..+|. +++++++++++++.+|.+.
T Consensus 141 prNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 141 ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCH
T ss_pred CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCH
Confidence 9999999999999999999 5999999999999999763
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.95 E-value=3.7e-09 Score=85.04 Aligned_cols=85 Identities=18% Similarity=0.140 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..++..|++++|+..|+++++.+|. +..++.++|.+|...|++++|+..++++++++|+++.++..+|.
T Consensus 41 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 119 (125)
T 1na0_A 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 119 (125)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34678899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhCC
Q 011349 461 ALFGLG 466 (488)
Q Consensus 461 ~~~~~~ 466 (488)
++..+|
T Consensus 120 ~~~~~g 125 (125)
T 1na0_A 120 AKQKQG 125 (125)
T ss_dssp HHHHHC
T ss_pred HHHhcc
Confidence 987654
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.6e-09 Score=84.25 Aligned_cols=66 Identities=17% Similarity=0.098 Sum_probs=62.9
Q ss_pred HhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 421 FARRCLCYLLSDMPQEALGDAMQAQVISPDWPT-AFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 421 ~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+++|.++...|++++|+..|+++++++|+++. +|+++|.++..+|++++|++.|+++++++|+..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 357899999999999999999999999999999 999999999999999999999999999999864
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.9e-09 Score=103.33 Aligned_cols=107 Identities=10% Similarity=-0.116 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHHHHHhc-C-ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHH--------HHHHHHHHHHHhC
Q 011349 379 QIQETLNSKKRGDAAFRA-K-DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQ--------EALGDAMQAQVIS 448 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~-~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~--------~A~~~~~~al~l~ 448 (488)
..++..+|..++.+.... + ++++++++++++++.+|+ +..+|+.|+.++..++.++ ++++.++++|+.+
T Consensus 119 nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpk-Ny~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~d 197 (349)
T 3q7a_A 119 NLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPK-NYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVD 197 (349)
T ss_dssp TCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTT-CHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhC
Confidence 346778999999999988 8 999999999999999999 9999999999999999988 9999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCC-------hHHHHHHHHHhhccccccc
Q 011349 449 PDWPTAFYLQAAALFGLGM-------NNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 449 p~~~~a~~~~g~~~~~~~~-------~~~A~~~~~~al~l~p~~~ 486 (488)
|.|..||++++.++..+++ ++++++++++++.++|++.
T Consensus 198 p~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~ 242 (349)
T 3q7a_A 198 GRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNV 242 (349)
T ss_dssp TTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred CCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999997 7999999999999999863
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.94 E-value=4.4e-09 Score=83.71 Aligned_cols=82 Identities=12% Similarity=-0.030 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..+...|..++..|+|++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|+++.++..++.
T Consensus 36 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 114 (118)
T 1elw_A 36 HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQN 114 (118)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999999999999999988
Q ss_pred HHH
Q 011349 461 ALF 463 (488)
Q Consensus 461 ~~~ 463 (488)
+..
T Consensus 115 ~~~ 117 (118)
T 1elw_A 115 MEA 117 (118)
T ss_dssp HHH
T ss_pred hhc
Confidence 753
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=98.93 E-value=3.1e-09 Score=87.73 Aligned_cols=75 Identities=11% Similarity=0.010 Sum_probs=69.1
Q ss_pred ccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 411 DGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 411 ~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..+|. .+..+.++|.++...|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+..|+++++++|+..
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 77 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV 77 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhH
Confidence 34666 8889999999999999999999999999999999999999999999999999999999999999999753
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.9e-09 Score=80.55 Aligned_cols=72 Identities=17% Similarity=-0.008 Sum_probs=65.4
Q ss_pred CCCCchHHHhcHHHHHHhhCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 413 GTMVSPTVFARRCLCYLLSDM---PQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 413 ~p~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+|+ ++.++..+|.+++..++ .++|...+++|++++|+++.+++.+|..++..|+|++|+..|+++++.+|+.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 577 88999999999876655 7999999999999999999999999999999999999999999999999973
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.1e-08 Score=83.53 Aligned_cols=81 Identities=11% Similarity=0.015 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..+...|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..++++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 788999999999999999999999999999999 8999999999999999999999999999999999999998888776
Q ss_pred Hh
Q 011349 463 FG 464 (488)
Q Consensus 463 ~~ 464 (488)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 44
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.92 E-value=6.8e-09 Score=81.79 Aligned_cols=78 Identities=10% Similarity=-0.038 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccC-------CCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGG-------TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 455 (488)
+..++..|..+++.|+|+.|+..|++|++.. +. ...++.++|.||.++|++++|+..+++|++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 5678899999999999999999999999753 33 678899999999999999999999999999999999999
Q ss_pred HHHHHH
Q 011349 456 YLQAAA 461 (488)
Q Consensus 456 ~~~g~~ 461 (488)
.+++..
T Consensus 84 ~n~~~~ 89 (104)
T 2v5f_A 84 GNLKYF 89 (104)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 888743
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.5e-08 Score=94.40 Aligned_cols=98 Identities=10% Similarity=-0.018 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHh----cCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCCH
Q 011349 381 QETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~ 452 (488)
.++.+++..|..+.. .+++++|+..|++|++. . ++.+++++|.+|.. .+++++|+..|++|++++ ++
T Consensus 72 ~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~-~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~ 146 (273)
T 1ouv_A 72 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--K-YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DG 146 (273)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CH
T ss_pred CCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--C-CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cH
Confidence 467889999999999 99999999999999987 3 77889999999999 999999999999999986 78
Q ss_pred HHHHHHHHHHHh----CCChHHHHHHHHHhhcccc
Q 011349 453 TAFYLQAAALFG----LGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 453 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~p 483 (488)
.+++++|.++.. .+++++|++.|++++++++
T Consensus 147 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 181 (273)
T 1ouv_A 147 DGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD 181 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 999999999999 9999999999999998754
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.2e-09 Score=85.08 Aligned_cols=84 Identities=10% Similarity=-0.078 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC--HHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQ 458 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~ 458 (488)
.++..++..|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..|+++++++|+. ..+...+
T Consensus 17 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l 95 (115)
T 2kat_A 17 DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKEL 95 (115)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHH
Confidence 45678999999999999999999999999999999 99999999999999999999999999999999854 4444444
Q ss_pred HHHHHhC
Q 011349 459 AAALFGL 465 (488)
Q Consensus 459 g~~~~~~ 465 (488)
...+..+
T Consensus 96 ~~~l~~l 102 (115)
T 2kat_A 96 QVFLRRL 102 (115)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4444433
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.3e-08 Score=82.90 Aligned_cols=83 Identities=12% Similarity=-0.048 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..++..|.+++..|+|++|+..|+++++.+|+ + +.+++++|.+|..+|++++|+..++++++.+|+++.+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 68899999999999999999999999999999 7 7889999999999999999999999999999999988777666
Q ss_pred HHHhCCC
Q 011349 461 ALFGLGM 467 (488)
Q Consensus 461 ~~~~~~~ 467 (488)
+....++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 5554443
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=6.2e-09 Score=93.55 Aligned_cols=97 Identities=14% Similarity=-0.006 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHhcC----ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCC--C
Q 011349 381 QETLNSKKRGDAAFRAK----DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISP--D 450 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~----~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p--~ 450 (488)
.++.+++..|..+.. + ++++|+..|++|++ +. ++.+++++|.+|.. .+++++|+..|++|++..| +
T Consensus 48 g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~ 123 (212)
T 3rjv_A 48 GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA 123 (212)
T ss_dssp TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHH
T ss_pred CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcc
Confidence 356667777777766 5 77777777777754 34 56667777777776 6777777777777777776 3
Q ss_pred CHHHHHHHHHHHHh----CCChHHHHHHHHHhhcc
Q 011349 451 WPTAFYLQAAALFG----LGMNNDAQETLKDGTNL 481 (488)
Q Consensus 451 ~~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 481 (488)
++.+++++|.+|.. .+++++|+..|++|+++
T Consensus 124 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 124 AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 57777777777777 67777777777777766
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=5.1e-09 Score=86.97 Aligned_cols=87 Identities=9% Similarity=0.035 Sum_probs=64.5
Q ss_pred hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHhCCChHHHHH
Q 011349 399 FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD---MPQEALGDAMQAQVIS-P-DWPTAFYLQAAALFGLGMNNDAQE 473 (488)
Q Consensus 399 ~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~~A~~ 473 (488)
...+.+.|.++++.++. +..+.++.|.|+.+.+ ++++|+..++.+++.+ | +..+++|++|.+++++|+|++|+.
T Consensus 14 l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp HHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 44566677777777776 7777777777777777 5667777787777777 6 557777888888888888888888
Q ss_pred HHHHhhccccccc
Q 011349 474 TLKDGTNLEAKKH 486 (488)
Q Consensus 474 ~~~~al~l~p~~~ 486 (488)
+++++|+++|++.
T Consensus 93 y~~~lL~ieP~n~ 105 (152)
T 1pc2_A 93 YVRGLLQTEPQNN 105 (152)
T ss_dssp HHHHHHHHCTTCH
T ss_pred HHHHHHhcCCCCH
Confidence 8888888777653
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.86 E-value=3.5e-09 Score=104.25 Aligned_cols=100 Identities=8% Similarity=-0.007 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch------HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC-----
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP------TVFARRCLCYLLSDMPQEALGDAMQAQVISPDW----- 451 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~------~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~----- 451 (488)
+..+...|..++..|+|++|+..|++++++.+. .. .++.++|.+|..+|++++|+..+++++++.|+.
T Consensus 187 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 265 (406)
T 3sf4_A 187 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE-FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 265 (406)
T ss_dssp HHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchH
Confidence 344555555555555555555555555544332 11 145555555555555555555555555554443
Q ss_pred -HHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 452 -PTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 452 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
+.+++.+|.++..+|++++|++.|++++++.+
T Consensus 266 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 298 (406)
T 3sf4_A 266 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 298 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 44555555555555555555555555554433
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.85 E-value=5.6e-09 Score=92.31 Aligned_cols=102 Identities=10% Similarity=0.015 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhc------cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh---CC--
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFID------GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVI---SP-- 449 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---~p-- 449 (488)
..+..+...|..++..|+|++|+..|+++++ ..+. ...++.++|.+|..+|++++|+..+++++++ .+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 102 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED 102 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc
Confidence 4567899999999999999999999999998 6666 8889999999999999999999999999998 44
Q ss_pred --CCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 450 --DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 450 --~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
....+++++|.++..+|++++|++.+++++++.+
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 138 (203)
T 3gw4_A 103 PLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQ 138 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3367899999999999999999999999998754
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.84 E-value=3.9e-09 Score=104.52 Aligned_cols=101 Identities=12% Similarity=0.020 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchH------HHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPT------VFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 451 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 451 (488)
.+..+...|..++..|+|++|+..|++++++.+. ... ++.++|.+|..+|++++|+..+++++++.|+.
T Consensus 222 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 300 (411)
T 4a1s_A 222 QGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGERE 300 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHH
Confidence 3445666666666666666666666666665543 222 56666666666666666666666666665543
Q ss_pred --HHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 452 --PTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 452 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
..+++.+|.++..+|++++|++.|++++++.+
T Consensus 301 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 334 (411)
T 4a1s_A 301 VEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQ 334 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 55666666666666666666666666665544
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.5e-08 Score=91.04 Aligned_cols=102 Identities=11% Similarity=-0.090 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHh----cCChHHHHHHHHHhhccCCC-CchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCC
Q 011349 381 QETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTM-VSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDW 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~ 451 (488)
.++.+++..|..+.. .+++++|+..|++|++.+|. ..+.+++++|.+|.. .+++++|+..|++|+++ |.+
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~ 161 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT 161 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC
Confidence 467889999999998 89999999999999999983 148899999999999 89999999999999999 888
Q ss_pred HHHHHHHHHHHHhC-C-----ChHHHHHHHHHhhcccc
Q 011349 452 PTAFYLQAAALFGL-G-----MNNDAQETLKDGTNLEA 483 (488)
Q Consensus 452 ~~a~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~p 483 (488)
+.+++++|.+|... | ++++|+..|++|.+...
T Consensus 162 ~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~ 199 (212)
T 3rjv_A 162 GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF 199 (212)
T ss_dssp THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 89999999999864 3 89999999999998743
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.83 E-value=1e-08 Score=103.67 Aligned_cols=103 Identities=9% Similarity=-0.042 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc-----CCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh----
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDG-----GTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI---- 447 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l---- 447 (488)
..+.+....+++..+..+|+|++|+..|++++++ .|++ -...++|+|.+|..+|+|++|+..+++++++
T Consensus 305 ~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~ 384 (490)
T 3n71_A 305 MIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKL 384 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 3345556677788888999999999999999953 4441 3467999999999999999999999999976
Q ss_pred -CCCC---HHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 448 -SPDW---PTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 448 -~p~~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
.|++ +..++++|.+|..+|+|++|+..|++|+++
T Consensus 385 lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 385 YHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3555 568999999999999999999999999975
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.81 E-value=6.3e-09 Score=99.08 Aligned_cols=99 Identities=16% Similarity=0.120 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc------hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC------H
Q 011349 385 NSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS------PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW------P 452 (488)
Q Consensus 385 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~------~ 452 (488)
.+...|..+...|++++|+..|++++++.+. . ..++.++|.+|..+|++++|+..+++++++.|.. .
T Consensus 225 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 303 (338)
T 3ro2_A 225 AYSNLGNAYIFLGEFETASEYYKKTLLLARQ-LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 303 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 5555666666666666666666666654433 2 3455556666666666666666666666655443 3
Q ss_pred HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 453 TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 453 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+++.+|.++..+|++++|++.|++++++.++
T Consensus 304 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 304 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 35556666666666666666666666655543
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.80 E-value=1e-08 Score=100.77 Aligned_cols=103 Identities=12% Similarity=-0.053 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC------CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCC-----
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM------VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISP----- 449 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p----- 449 (488)
..+..++..|..++..|++++|+..|++|+++.+. ....+++++|.+|..+|++++|++.|++|+++.+
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 218 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQND 218 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCH
Confidence 45666777777777777777777777777754332 0234566777777777777777777777776532
Q ss_pred -CCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 450 -DWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 450 -~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
..+.+++++|.++..+|++++|++.|++|+++..
T Consensus 219 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 253 (378)
T 3q15_A 219 RFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSR 253 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 1245677777777777777777777777776543
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.75 E-value=6.9e-08 Score=92.37 Aligned_cols=74 Identities=12% Similarity=0.097 Sum_probs=64.8
Q ss_pred hccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 410 IDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 410 i~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
+..+|. ++.+|.-+|.++...|++++|+..+++|++++|+ ..+|..+|.++...|++++|++.|++|++++|..
T Consensus 270 ~~~~~~-~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 270 LPELNN-LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp CGGGTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred cccCCc-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 355666 6667777777777789999999999999999975 6789999999999999999999999999999964
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=2.8e-08 Score=98.89 Aligned_cols=95 Identities=11% Similarity=-0.061 Sum_probs=79.3
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhhc-----cCCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-----CCCC---
Q 011349 387 KKRGDAAFRAKDFPTAIECYTHFID-----GGTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI-----SPDW--- 451 (488)
Q Consensus 387 ~~~g~~~~~~~~~~~A~~~~~~ai~-----~~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-----~p~~--- 451 (488)
.+.+......|+|++|+..|+++++ +.|++ -...++|+|.+|..+|+|++|+..+++++++ .|++
T Consensus 302 le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 302 IEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 3344444567999999999999996 35551 3457999999999999999999999999966 3454
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
+..++++|.+|..+|+|++|+..|++|+++
T Consensus 382 a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 382 ASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 567999999999999999999999999976
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.70 E-value=2.4e-08 Score=80.97 Aligned_cols=85 Identities=14% Similarity=0.071 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc-------hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS-------PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPT 453 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~ 453 (488)
.++..+...|..++..|+|++|+..|+++++.+|. . ..+++++|.+|..+|++++|+..|++++++.| ++.
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~ 113 (131)
T 1elr_A 36 TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPD 113 (131)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHH
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHH
Confidence 35678999999999999999999999999999886 5 88999999999999999999999999999999 588
Q ss_pred HHHHHHHHHHhCCC
Q 011349 454 AFYLQAAALFGLGM 467 (488)
Q Consensus 454 a~~~~g~~~~~~~~ 467 (488)
.+..++.++..+++
T Consensus 114 ~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 114 VLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888766543
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=5.7e-08 Score=92.53 Aligned_cols=134 Identities=15% Similarity=0.061 Sum_probs=95.3
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCC---CCccccccee-cCCeeeEEEecCCC
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSE---RLVNLIGCCC-EGEERLLVAEFMPN 134 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~ 134 (488)
++.++.|....||+. |..++||+.... .....+.+|+.+|+.+.+. .+++.+.++. ..+..++|||+++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456788888899987 456888885321 2245789999999999753 3566666663 44567899999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG------------------------------------------ 172 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------ 172 (488)
.+|.+... ..++..+...++.++++.|..||+..
T Consensus 98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 88876321 12456666666666666666666431
Q ss_pred -----------------CcccccccCCceeecC---CCCC-eeccCCCccc
Q 011349 173 -----------------RALYHDLNTYRILFDQ---DGNP-RLSCFGLMKN 202 (488)
Q Consensus 173 -----------------~iiH~Dlkp~Nill~~---~~~~-kl~Dfgla~~ 202 (488)
.++|+|++|.||+++. ++.+ .|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1489999999999987 4554 7999998754
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.67 E-value=7.1e-08 Score=99.26 Aligned_cols=103 Identities=7% Similarity=-0.154 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHh-------cCChH-------HHHHHHHHhhc-cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFR-------AKDFP-------TAIECYTHFID-GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQ 445 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~-------~~~~~-------~A~~~~~~ai~-~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al 445 (488)
..+..|+..|..+.+ .|+++ +|+..|++|++ .+|+ +..+|.++|.++...|++++|...|++++
T Consensus 270 ~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~al 348 (530)
T 2ooe_A 270 HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLL 348 (530)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 456677777777765 57766 77777777776 6777 77777777777777777777777777777
Q ss_pred HhCCCCH-HHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 446 VISPDWP-TAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 446 ~l~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
++.|+++ .+|...|.++..+|++++|++.|++|++..|.
T Consensus 349 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 349 AIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred CccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 7777774 57777777777777777777777777766553
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.66 E-value=1.3e-07 Score=78.56 Aligned_cols=89 Identities=8% Similarity=-0.087 Sum_probs=83.4
Q ss_pred HHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 011349 389 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG 464 (488)
Q Consensus 389 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 464 (488)
.|..+...+.+++|++.|++|.+. . ++.+++++|.+|.. .+++++|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 889999999999999999999997 4 77899999999999 89999999999999998 789999999999999
Q ss_pred ----CCChHHHHHHHHHhhccc
Q 011349 465 ----LGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 465 ----~~~~~~A~~~~~~al~l~ 482 (488)
.+++++|++.|++|.++.
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCCcCHHHHHHHHHHHHHCC
Confidence 999999999999999874
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.64 E-value=4.7e-08 Score=90.66 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--PTAFYLQAAA 461 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~ 461 (488)
......|..+...|+|++|.+.|+.++..+|. .. +.+.+|.++++.++|++|+..++++++..+.. ..+++++|.+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~a 180 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVA 180 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHH
Confidence 34556788999999999999999999999998 77 88999999999999999999999988764222 4689999999
Q ss_pred HHhCCChHHHHHHHHHhhccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~ 482 (488)
+..+|++++|+..|++++.-.
T Consensus 181 l~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 181 AANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHTTCHHHHHHHHHHHHTST
T ss_pred HHHCCCHHHHHHHHHHHhcCC
Confidence 999999999999999998543
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=7.7e-08 Score=95.81 Aligned_cols=99 Identities=11% Similarity=0.013 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhcc-----CCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-----CCC
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDG-----GTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI-----SPD 450 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-----~p~ 450 (488)
+.........+.++|+|++|+..|++++++ .|++ -...++|+|.+|..+|+|++|+..+++++++ .|+
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 334455566677889999999999999964 4441 2457999999999999999999999999966 345
Q ss_pred C---HHHHHHHHHHHHhCCChHHHHHHHHHhhcc
Q 011349 451 W---PTAFYLQAAALFGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 451 ~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 481 (488)
+ +..++++|.+|..+|++++|+..|++|+++
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 4 557999999999999999999999999975
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=1.2e-07 Score=88.54 Aligned_cols=128 Identities=14% Similarity=0.037 Sum_probs=91.8
Q ss_pred CCCc-eEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEEecCCCCChhhhh
Q 011349 65 KAPN-VVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVAEFMPNETLSKHL 141 (488)
Q Consensus 65 G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 141 (488)
|..| .||+.... ++..+.||+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++.+..
T Consensus 35 G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~ 111 (272)
T 4gkh_A 35 GQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVL 111 (272)
T ss_dssp SSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHH
T ss_pred CCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccc
Confidence 4333 69988743 4667899986532 3457889999999884 434778899988889999999999998877654
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------------
Q 011349 142 FHWENQPMKWAMRVRVALYLAQALDYCSSKG------------------------------------------------- 172 (488)
Q Consensus 142 ~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------------- 172 (488)
.. .......+..+++..|.-||+..
T Consensus 112 ~~------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 185 (272)
T 4gkh_A 112 EE------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHK 185 (272)
T ss_dssp HH------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHT
T ss_pred cC------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHh
Confidence 31 11223345555555555555310
Q ss_pred --------CcccccccCCceeecCCCCCeeccCCCcc
Q 011349 173 --------RALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 173 --------~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
-++|+|+.|.|||+++++.+-|+||+.+.
T Consensus 186 ~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 186 LLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 06899999999999987777799999875
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.58 E-value=1.9e-07 Score=96.05 Aligned_cols=100 Identities=14% Similarity=0.020 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHH-HHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLC-YLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
..|...|..+.+.|++++|+..|++|++..|. ....|...+.. +...|++++|...|+++++..|+++.+|...|..+
T Consensus 357 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~ 435 (530)
T 2ooe_A 357 LVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL 435 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 46666666666667777777777777776665 55555444433 34577888888888888888888888888888888
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~ 484 (488)
..+|++++|...|++|++..|.
T Consensus 436 ~~~g~~~~Ar~~~~~al~~~~~ 457 (530)
T 2ooe_A 436 SHLNEDNNTRVLFERVLTSGSL 457 (530)
T ss_dssp TTTTCHHHHHHHHHHHHHSCCS
T ss_pred HhCCCHhhHHHHHHHHHhccCC
Confidence 8888888888888888876543
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.58 E-value=8.9e-08 Score=93.50 Aligned_cols=100 Identities=14% Similarity=0.043 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccC--------CCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGG--------TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 451 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 451 (488)
..+...|..++..|+|++|+..|++++++. |. ...++.++|.++...|++++|+..+++++++.|..
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 172 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ 172 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH
Confidence 446789999999999999999999999764 33 45678889999999999999999999999999863
Q ss_pred -HHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 452 -PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 452 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
..+++.+|.++...|++++|.+.+++++++.+.
T Consensus 173 ~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~ 206 (373)
T 1hz4_A 173 QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGN 206 (373)
T ss_dssp GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 568999999999999999999999999988654
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.55 E-value=2.2e-07 Score=90.67 Aligned_cols=67 Identities=10% Similarity=-0.018 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC----chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV----SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD 450 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~ 450 (488)
..+...|..++..|++++|+..|++++++.+.. ...++.++|.++...|++++|+..+++++++.+.
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~ 206 (373)
T 1hz4_A 136 FLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGN 206 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 344445555555555555555555555544421 1234445555555555555555555555555433
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.3e-07 Score=92.04 Aligned_cols=81 Identities=4% Similarity=-0.058 Sum_probs=58.1
Q ss_pred cccC-CCCCCceEEEEEeC-------CCcEEEEEEccCCC---CCChHHHHHHHHHHhhcC-C--CCCcccccceecC--
Q 011349 59 VSEH-GEKAPNVVYKGLVD-------EDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLR-S--ERLVNLIGCCCEG-- 122 (488)
Q Consensus 59 ~~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~-- 122 (488)
++.| +.|..+.+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+++++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4566 88889999998754 26678899865432 112356889999999985 3 3577888877554
Q ss_pred -CeeeEEEecCCCCChhh
Q 011349 123 -EERLLVAEFMPNETLSK 139 (488)
Q Consensus 123 -~~~~lv~e~~~~gsL~~ 139 (488)
+..++|||+++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35789999999877654
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=3.4e-07 Score=84.07 Aligned_cols=104 Identities=13% Similarity=-0.004 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHh-----cCC------hHHHHHHHHHhhccCCC-CchHHHhcHHHHHHhh-----CCHHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFR-----AKD------FPTAIECYTHFIDGGTM-VSPTVFARRCLCYLLS-----DMPQEALGDAMQ 443 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~-----~~~------~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~~-----~~~~~A~~~~~~ 443 (488)
++++.++..|..... .|+ ...|...+++||+++|+ .+..+|..+|..|.+. |+.++|.++|++
T Consensus 150 ~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~fer 229 (301)
T 3u64_A 150 VDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEH 229 (301)
T ss_dssp GGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHH
Confidence 445555555555432 243 57899999999999998 2345899999999995 999999999999
Q ss_pred HHHhCCCC-HHHHHHHHHHHHh-CCChHHHHHHHHHhhccccc
Q 011349 444 AQVISPDW-PTAFYLQAAALFG-LGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 444 al~l~p~~-~~a~~~~g~~~~~-~~~~~~A~~~~~~al~l~p~ 484 (488)
|++++|+. ..+++..|..+.. +|++++|.+.+++|++.+|.
T Consensus 230 AL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 230 LTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 99999975 9999999999988 59999999999999999887
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.46 E-value=4.8e-07 Score=70.99 Aligned_cols=69 Identities=12% Similarity=-0.144 Sum_probs=62.3
Q ss_pred hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 418 PTVFARRCLCYLLSDMPQEALGDAMQAQVIS-------PDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 418 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.-.+.+|..++..++|..|+..|++|++.. +..+..+.++|.+++++|++++|+..+++|++++|+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 4456789999999999999999999999874 45688999999999999999999999999999999864
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.45 E-value=7.3e-07 Score=90.66 Aligned_cols=98 Identities=11% Similarity=-0.035 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHhcC---ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCCHH
Q 011349 381 QETLNSKKRGDAAFRAK---DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPT 453 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~~ 453 (488)
.++.+++..|..+...| ++++|++.|++|++. . ++.+++++|.+|.. .+++++|+..|++|++. +++.
T Consensus 326 ~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~ 400 (490)
T 2xm6_A 326 GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSA 400 (490)
T ss_dssp TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHH
Confidence 45678889999998866 899999999999987 4 67899999999999 89999999999999986 4799
Q ss_pred HHHHHHHHHHh----CCChHHHHHHHHHhhcccc
Q 011349 454 AFYLQAAALFG----LGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 454 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~p 483 (488)
+++++|.+|.. .+++++|++.|++|++.+|
T Consensus 401 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 401 AQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 99999999998 8999999999999999984
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.43 E-value=6.3e-07 Score=68.60 Aligned_cols=71 Identities=6% Similarity=-0.127 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHhcCC---hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH
Q 011349 381 QETLNSKKRGDAAFRAKD---FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~ 452 (488)
+++..+..+|.+++..++ .++|...+++|++++|+ +..++..+|..+++.|+|++|+..++++++.+|..+
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 357788999999976555 79999999999999999 999999999999999999999999999999999843
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.41 E-value=4.6e-07 Score=91.25 Aligned_cols=95 Identities=11% Similarity=0.054 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHhcC---ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhh----CCHHHHHHHHHHHHHhCCCCHHHH
Q 011349 383 TLNSKKRGDAAFRAK---DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS----DMPQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~----~~~~~A~~~~~~al~l~p~~~~a~ 455 (488)
+.+++..|..+...| ++++|+..|+++++.+|. .+..++++|.+|... +++++|+..|+++. |+++.++
T Consensus 176 ~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~ 251 (452)
T 3e4b_A 176 DICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASW 251 (452)
T ss_dssp TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHH
T ss_pred HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 336666777777777 777777777777777666 666666666666554 56677777777766 6667777
Q ss_pred HHHHHH-H--HhCCChHHHHHHHHHhhcc
Q 011349 456 YLQAAA-L--FGLGMNNDAQETLKDGTNL 481 (488)
Q Consensus 456 ~~~g~~-~--~~~~~~~~A~~~~~~al~l 481 (488)
+++|.+ + ...+++++|++.|++|.+.
T Consensus 252 ~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 252 VSLAQLLYDFPELGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp HHHHHHHHHSGGGCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHC
Confidence 777766 3 3566677777777766644
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.40 E-value=5.8e-07 Score=74.56 Aligned_cols=81 Identities=12% Similarity=-0.037 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHhcC---ChHHHHHHHHHhhccC-CCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAK---DFPTAIECYTHFIDGG-TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
+.++.++.|.++.+.+ +.++|+..+++.++.+ |.+...+++++|..|+++|+|++|+++++++++++|+|..|..-
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 5678899999999988 7889999999999998 74378899999999999999999999999999999999998776
Q ss_pred HHHHH
Q 011349 458 QAAAL 462 (488)
Q Consensus 458 ~g~~~ 462 (488)
+-.+-
T Consensus 111 k~~ie 115 (152)
T 1pc2_A 111 ERLID 115 (152)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.38 E-value=4.7e-07 Score=91.55 Aligned_cols=100 Identities=11% Similarity=-0.001 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc-----CCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-----C
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDG-----GTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI-----S 448 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-----~ 448 (488)
.-+..+.+.|.+|..+|+|++|+..|++++++ .|++ -...++|+|.+|..+|+|++|+..|++|+++ .
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999953 4441 4467999999999999999999999999965 5
Q ss_pred CCC---HHHHHHHHHHHHhCCChHHHHHHHHHhhc
Q 011349 449 PDW---PTAFYLQAAALFGLGMNNDAQETLKDGTN 480 (488)
Q Consensus 449 p~~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 480 (488)
|++ .+....++.++..+++|++|...|.++.+
T Consensus 429 ~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 429 PSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666 45677899999999999999999998864
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.32 E-value=3.4e-06 Score=85.74 Aligned_cols=96 Identities=14% Similarity=-0.045 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHh----cCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCCH
Q 011349 381 QETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~ 452 (488)
.++.+++..|..+.. .+++++|+..|++|++. . ++.+++++|.+|.. .+++++|+..|++|++. +++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--G-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 567899999999999 99999999999999985 3 66788899999998 88999999999999876 689
Q ss_pred HHHHHHHHHHHh----CCChHHHHHHHHHhhcc
Q 011349 453 TAFYLQAAALFG----LGMNNDAQETLKDGTNL 481 (488)
Q Consensus 453 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 481 (488)
.+++++|.+|.. .+++++|++.|+++++.
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~ 180 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ 180 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 999999999998 88999999999999876
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.32 E-value=5e-06 Score=80.13 Aligned_cols=137 Identities=12% Similarity=0.090 Sum_probs=81.4
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCC--CCCcccccc------eecCCeeeEEEe
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS--ERLVNLIGC------CCEGEERLLVAE 130 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~------~~~~~~~~lv~e 130 (488)
+..|+.|..+.||+....+|. +++|+.... ...+..|+.+++.+.. -.+++++.. ....+..++||+
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSGA-VCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTEE-EEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCCC-EEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 345666788999999876655 899998752 3455567777776642 234444431 124567899999
Q ss_pred cCCCCChhh--------------hhccC-CCC-----------CCCHHHH------------------------------
Q 011349 131 FMPNETLSK--------------HLFHW-ENQ-----------PMKWAMR------------------------------ 154 (488)
Q Consensus 131 ~~~~gsL~~--------------~l~~~-~~~-----------~l~~~~~------------------------------ 154 (488)
|++|.++.. .++.. ... .-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 999865530 11110 000 0122211
Q ss_pred -HHHHHHHHHHHHHHHh-------------CCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 155 -VRVALYLAQALDYCSS-------------KGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 155 -~~i~~~i~~~l~~LH~-------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
..+...+..++.+|+. .. ++|+|+++.|||++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPN-LCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCC-EECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCc-eecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111223445666652 34 8999999999999878889999999764
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=2.8e-06 Score=83.87 Aligned_cols=96 Identities=17% Similarity=0.059 Sum_probs=58.8
Q ss_pred ccccCHHHHHHHhc---CCCc--ccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCC-------CChHHHHHHHHHH
Q 011349 38 FREFNLDQLRAATS---GFCA--DNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAW-------PDSRQFLEEARAV 104 (488)
Q Consensus 38 ~~~~~~~~~~~~~~---~~~~--~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l 104 (488)
+..++.+++..... -|.. ..-++.+|.|.++.||++... +++.|+||....... .....+..|.++|
T Consensus 9 ~~~l~~~~v~~~l~~~~~~~~~~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L 88 (397)
T 2olc_A 9 YETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSAL 88 (397)
T ss_dssp CCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHH
T ss_pred cccCCHHHHHHHHHhcCcCCCCCceEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHH
Confidence 44455555554433 2222 123567899999999999743 467899998653211 1235678899999
Q ss_pred hhcCC--C-CCcccccceecCCeeeEEEecCCCC
Q 011349 105 GLLRS--E-RLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 105 ~~l~h--~-niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
+.+.. + .+++++.+ +.+..++|||+++|.
T Consensus 89 ~~l~~~~~~~vP~~~~~--d~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 89 IRQGEHVPHLVPRVFYS--DTEMAVTVMEDLSHL 120 (397)
T ss_dssp HHHHTTCGGGSCCEEEE--ETTTTEEEECCCTTS
T ss_pred HHhhhhCCCCcCeEEEE--cCCccEEEEEeCCCc
Confidence 98842 3 34566643 345568999999864
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.26 E-value=3.5e-06 Score=92.68 Aligned_cols=63 Identities=19% Similarity=0.221 Sum_probs=51.4
Q ss_pred chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 417 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+.+|+++|.++.+.|++++|+..|.+| +++.+|++.|.++.++|+|++|+++|..|.+.+++
T Consensus 1104 ~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1104 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 5678888888888888888888888776 77888888888888888888888888888877654
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.24 E-value=4.1e-06 Score=92.13 Aligned_cols=95 Identities=12% Similarity=0.035 Sum_probs=77.1
Q ss_pred hhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC-------
Q 011349 378 DQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD------- 450 (488)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~------- 450 (488)
+++..+..|++.|.++.+.|++++|++.|.+| + ++..|.+.|.++.++|+|++|++.|..|.+..++
T Consensus 1100 ervn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~L 1173 (1630)
T 1xi4_A 1100 ERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETEL 1173 (1630)
T ss_pred HhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHH
Confidence 45577889999999999999999999999887 4 7789999999999999999999999888766643
Q ss_pred --------------------CHHHHHHHHHHHHhCCChHHHHHHHHHh
Q 011349 451 --------------------WPTAFYLQAAALFGLGMNNDAQETLKDG 478 (488)
Q Consensus 451 --------------------~~~a~~~~g~~~~~~~~~~~A~~~~~~a 478 (488)
+...|++.|..++..|+|++|+..|.+|
T Consensus 1174 afaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1174 IFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 2234566777777777777777777665
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.24 E-value=3e-06 Score=70.17 Aligned_cols=79 Identities=14% Similarity=-0.006 Sum_probs=71.2
Q ss_pred cCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh----CCChHHH
Q 011349 396 AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG----LGMNNDA 471 (488)
Q Consensus 396 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A 471 (488)
.+++++|+..|++|.+.+.. .+. +|.+|...+.+++|++.|++|.+. +++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-THH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 35799999999999998754 333 999999999999999999999998 799999999999998 8999999
Q ss_pred HHHHHHhhcc
Q 011349 472 QETLKDGTNL 481 (488)
Q Consensus 472 ~~~~~~al~l 481 (488)
++.|++|.+.
T Consensus 81 ~~~~~~Aa~~ 90 (138)
T 1klx_A 81 AQYYSKACGL 90 (138)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999999876
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.21 E-value=1e-05 Score=81.36 Aligned_cols=94 Identities=10% Similarity=-0.102 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHH-H--HhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC-----CHHHHHHHHHHHHHhCCCCH
Q 011349 381 QETLNSKKRGDA-A--FRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD-----MPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 381 ~~~~~~~~~g~~-~--~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-----~~~~A~~~~~~al~l~p~~~ 452 (488)
.++.+++..|.. + ...+++++|+..|++|++.+ ++.+++++|.+|. .| ++++|+..|++|+ |+++
T Consensus 246 g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~ 318 (452)
T 3e4b_A 246 GYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREV 318 (452)
T ss_dssp GSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCH
T ss_pred CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCH
Confidence 445566666665 3 35566666666666666432 4555666666665 34 6666666666666 6666
Q ss_pred HHHHHHHHHHHh----CCChHHHHHHHHHhhcc
Q 011349 453 TAFYLQAAALFG----LGMNNDAQETLKDGTNL 481 (488)
Q Consensus 453 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 481 (488)
.+++++|.+|.. ..++++|+..|++|.+.
T Consensus 319 ~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 319 AADYYLGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp HHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 666666666555 23666666666666553
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.20 E-value=2.9e-06 Score=67.71 Aligned_cols=84 Identities=8% Similarity=0.048 Sum_probs=46.1
Q ss_pred HHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHhCCChHHHHHHH
Q 011349 401 TAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQE---ALGDAMQAQVIS-P-DWPTAFYLQAAALFGLGMNNDAQETL 475 (488)
Q Consensus 401 ~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~---A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~~A~~~~ 475 (488)
.+.+.|.+++..++. ...+-++.|.++.+..+..+ +|..++..++-+ | ..-+.+|.+|.+++++|+|++|+.++
T Consensus 19 ~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~ 97 (126)
T 1nzn_A 19 KFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYV 97 (126)
T ss_dssp HHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 344444555444444 55555555555555555444 555555555554 3 34455566666666666666666666
Q ss_pred HHhhcccccc
Q 011349 476 KDGTNLEAKK 485 (488)
Q Consensus 476 ~~al~l~p~~ 485 (488)
+..|+++|++
T Consensus 98 ~~lL~~eP~n 107 (126)
T 1nzn_A 98 RGLLQTEPQN 107 (126)
T ss_dssp HHHHHHCTTC
T ss_pred HHHHHhCCCC
Confidence 6666666654
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=98.10 E-value=4.2e-06 Score=82.25 Aligned_cols=93 Identities=12% Similarity=0.073 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..|..+|.++++.|+|++|++.|.+| . ++..|.....++...|+|+.|..+... |..+|++ ...+...
T Consensus 147 ~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~ 216 (449)
T 1b89_A 147 NVSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINY 216 (449)
T ss_dssp HTTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHH
T ss_pred HhhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHH
Confidence 3456666666666666666666666666 2 445666666666666666666555553 3344444 3356678
Q ss_pred HHhCCChHHHHHHHHHhhccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
|...|++++|+..|++++.+|+.
T Consensus 217 Yek~G~~eEai~lLe~aL~le~a 239 (449)
T 1b89_A 217 YQDRGYFEELITMLEAALGLERA 239 (449)
T ss_dssp HHHTTCHHHHHHHHHHHTTSTTC
T ss_pred HHHCCCHHHHHHHHHHHhCCcHH
Confidence 89999999999999999999864
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.08 E-value=5.2e-06 Score=82.47 Aligned_cols=100 Identities=8% Similarity=-0.007 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch-----------------HHHhcHHHHHHhhCCHHHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP-----------------TVFARRCLCYLLSDMPQEALGDAMQAQV 446 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~~~~~~al~ 446 (488)
.+..++|..+.+.|+|++|++.|.++++.+|. .. .++.++|.+|...|++++|++.+.++++
T Consensus 5 ~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~ 83 (434)
T 4b4t_Q 5 GSKLEEARRLVNEKQYNEAEQVYLSLLDKDSS-QSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTE 83 (434)
T ss_dssp THHHHHHHHHHHHTCHHHHHHHHHHHHHSCCC-SSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 35567888889999999999999999988876 32 2477889999999999999999999998
Q ss_pred hCCCCHHH------HHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 447 ISPDWPTA------FYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 447 l~p~~~~a------~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+.+...++ +..+|.++...|++++|++.+++++...++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 127 (434)
T 4b4t_Q 84 YMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKR 127 (434)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 87765443 345677777788888888888888776554
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.08 E-value=1.9e-05 Score=74.16 Aligned_cols=99 Identities=11% Similarity=-0.075 Sum_probs=59.4
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhccCC--CCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCC----CHHHHHHH
Q 011349 385 NSKKRGDAAFRAKDFPTAIECYTHFIDGGT--MVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPD----WPTAFYLQ 458 (488)
Q Consensus 385 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~----~~~a~~~~ 458 (488)
++.-.|.++...|++++|++.+.++|..+| . ...++...+.+++++|+.+.|.+.+++..+.+|+ +-....++
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~L 180 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNL 180 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHH
Confidence 345666666666777777777777666665 4 6666666666667777777777776666666662 11223333
Q ss_pred HH--HHHhCC--ChHHHHHHHHHhhccccc
Q 011349 459 AA--ALFGLG--MNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 459 g~--~~~~~~--~~~~A~~~~~~al~l~p~ 484 (488)
+. +....| ++++|...|+++.+..|+
T Consensus 181 aea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 181 AESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 32 244334 666666666666655553
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=98.05 E-value=2e-05 Score=74.65 Aligned_cols=75 Identities=20% Similarity=0.080 Sum_probs=60.4
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC---CCCCcccccceecCCeeeEEEecCCCC
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR---SERLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
++.++.|....+|+... ++..++||+.... ....+.+|+..|+.+. ...+++++.++...+..++|||+++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45689999999999876 4567889987542 3567899999999984 356888888887778899999999987
Q ss_pred Ch
Q 011349 136 TL 137 (488)
Q Consensus 136 sL 137 (488)
++
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 65
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.05 E-value=1.5e-05 Score=74.80 Aligned_cols=97 Identities=12% Similarity=-0.003 Sum_probs=79.3
Q ss_pred HHHHHHHHHHhcC--ChHHHHHHHHHhhccCCC-CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh----------CCCC
Q 011349 385 NSKKRGDAAFRAK--DFPTAIECYTHFIDGGTM-VSPTVFARRCLCYLLSDMPQEALGDAMQAQVI----------SPDW 451 (488)
Q Consensus 385 ~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l----------~p~~ 451 (488)
.....|.+.+..| ++++|...|+++.+..|+ .....+++ +++.+|++++|.+.+++++++ +|++
T Consensus 178 ~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~ 254 (310)
T 3mv2_B 178 LNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYK 254 (310)
T ss_dssp HHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSH
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCC
Confidence 3444454466556 999999999999988875 01233334 899999999999999988887 5999
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++++.++..+.+.+|+ +|.+.++++.+++|+.+
T Consensus 255 ~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 255 PTFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp HHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 9999999999999998 99999999999999853
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.94 E-value=2.6e-05 Score=73.19 Aligned_cols=76 Identities=20% Similarity=0.202 Sum_probs=57.4
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCC---CCcccccceecCCeeeEEEecCCC
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSE---RLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
-+..+|.|..+.||+....+|+.|.||+...........|.+|+..|+.|.-. .+++++++. ..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 35678999999999999999999999987655544455788999999998422 345555542 34789999987
Q ss_pred CCh
Q 011349 135 ETL 137 (488)
Q Consensus 135 gsL 137 (488)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.93 E-value=5.4e-05 Score=72.23 Aligned_cols=160 Identities=13% Similarity=0.114 Sum_probs=93.8
Q ss_pred ccccCHHHHHHHhcCCCccc--ccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC--Cc
Q 011349 38 FREFNLDQLRAATSGFCADN--IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER--LV 113 (488)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~--~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 113 (488)
+..++.+++......|.... -++.++.|....||+....+| .+++|+..... ....+..|+.+++.+...+ ++
T Consensus 4 ~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 4 YTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp -CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCC
Confidence 34567788887777665422 345678888899999987666 48899887531 2346677888888884322 34
Q ss_pred ccccce------ecCCeeeEEEecCCCCChhhh--------------hccC-CC--CC----C---CHHHHHH-------
Q 011349 114 NLIGCC------CEGEERLLVAEFMPNETLSKH--------------LFHW-EN--QP----M---KWAMRVR------- 156 (488)
Q Consensus 114 ~~~~~~------~~~~~~~lv~e~~~~gsL~~~--------------l~~~-~~--~~----l---~~~~~~~------- 156 (488)
+++... ...+..+++|++++|.++... ++.. .. .+ . .|...+.
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 444321 123567899999998654210 1110 00 00 1 1221100
Q ss_pred -----HHHHHHHHHHHHHh-------CCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 157 -----VALYLAQALDYCSS-------KGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 157 -----i~~~i~~~l~~LH~-------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
+...+...+..++. .+ ++|+|+.+.|||++.++.+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~-liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcc-cCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113444555553 23 8999999999999977666899999764
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.93 E-value=3.4e-05 Score=64.35 Aligned_cols=94 Identities=11% Similarity=-0.059 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCC--------CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCC------
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM--------VSPTVFARRCLCYLLSDMPQEALGDAMQAQVISP------ 449 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p------ 449 (488)
.++++....++..|.|+.|+-..+.++.+..+ ..+.++...|.+++..++|..|...|++||++.-
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 35677788889999999999999998755332 1123778899999999999999999999985531
Q ss_pred -------------------CCHHHHHHHHHHHHhCCChHHHHHHHHH
Q 011349 450 -------------------DWPTAFYLQAAALFGLGMNNDAQETLKD 477 (488)
Q Consensus 450 -------------------~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 477 (488)
.+.+..|.+|.||.+++++++|+..++.
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1236889999999999999999998775
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.90 E-value=4.7e-05 Score=75.48 Aligned_cols=102 Identities=7% Similarity=-0.025 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCC-----CchHHHhcHHHHHHhhCCHHHHHHHHHHHHHh------CCCC
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTM-----VSPTVFARRCLCYLLSDMPQEALGDAMQAQVI------SPDW 451 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l------~p~~ 451 (488)
.......|..+...|++++|+..|+++++..+. ....++.++|.+|...|+|++|+..+++++.. .|..
T Consensus 95 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~ 174 (434)
T 4b4t_Q 95 KVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSL 174 (434)
T ss_dssp HHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhH
Confidence 345566788888899999999999999864322 14678899999999999999999999999876 4555
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
.+++...|.++..+|++++|...|++++.+.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 175 VDVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999987654
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.87 E-value=6.7e-05 Score=74.55 Aligned_cols=74 Identities=14% Similarity=0.158 Sum_probs=45.9
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEccCC----CC--C---ChHHHHHHHHHHhh-cCCCCCcccccceecCCeeeE
Q 011349 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRS----AW--P---DSRQFLEEARAVGL-LRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~----~~--~---~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~l 127 (488)
-++.+|.|..+.||++.. +++.++||..... .. . ....+..|+..+.. .....+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 456789999999999964 4667999943211 00 1 22233344333321 2234677777665 466799
Q ss_pred EEecC-CC
Q 011349 128 VAEFM-PN 134 (488)
Q Consensus 128 v~e~~-~~ 134 (488)
|||++ +|
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00018 Score=68.80 Aligned_cols=98 Identities=15% Similarity=0.098 Sum_probs=63.9
Q ss_pred ccccCHHHHHHHhcCCCcc--cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC--Cc
Q 011349 38 FREFNLDQLRAATSGFCAD--NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER--LV 113 (488)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~--~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 113 (488)
+...+.+++..+...+.-. .-+..++ |....||+....+|+.+++|..+... .....+..|..+++.+.... ++
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeec
Confidence 5556777776665544322 1234566 88889999877677779999987442 24567888999998885322 44
Q ss_pred ccccc-----eecCCeeeEEEecCCCCCh
Q 011349 114 NLIGC-----CCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 114 ~~~~~-----~~~~~~~~lv~e~~~~gsL 137 (488)
+++.. ....+..++||++++|.++
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~ 114 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQF 114 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEEC
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCC
Confidence 45443 1124456889999997554
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.72 E-value=6.6e-05 Score=65.82 Aligned_cols=139 Identities=12% Similarity=0.036 Sum_probs=91.5
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcccccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCS-SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL 213 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~ 213 (488)
-||.++|.. .+.+++++++|.++.|.+.+|.-+- ... -..+=+.|..|++..+|.|.+.+ +.+ .....
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~~~~ 101 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AAD--------DAGEP 101 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-ccc--------ccccc
Confidence 478888865 5678999999999999999987762 222 12233457899999999988763 211 11233
Q ss_pred CCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhccC-
Q 011349 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY- 292 (488)
Q Consensus 214 ~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~- 292 (488)
.+.+||... ...+.+.-|||||++||.-+--..|... +...++.|.+||..|...
T Consensus 102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e-----------------------E~eLS~~LE~LL~~Mt~~~ 157 (229)
T 2yle_A 102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE-----------------------ERELSPPLEQLIDHMANTV 157 (229)
T ss_dssp -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE-----------------------EECCCHHHHHHHHHHTTCC
T ss_pred CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc-----------------------chhhCHHHHHHHHHHHhcc
Confidence 567888764 3455677899999999999877654221 123357788899888755
Q ss_pred ------------------------CCCCCCCHHHHHHHhc
Q 011349 293 ------------------------EPRERPNAKSLVASLT 308 (488)
Q Consensus 293 ------------------------dp~~Rps~~~il~~l~ 308 (488)
.+..|++.++|++.-.
T Consensus 158 ~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~ 197 (229)
T 2yle_A 158 EADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCA 197 (229)
T ss_dssp C--------------------CCSCCCCCCSHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCcCCHHHHHHHHH
Confidence 2457788888887654
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00015 Score=57.74 Aligned_cols=81 Identities=10% Similarity=-0.088 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHhcCChHH---HHHHHHHhhccC-CCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPT---AIECYTHFIDGG-TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~---A~~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
...+.++.|.++....+... +|..++..+..+ |...-...+.+|..++++|+|++|+.+++..|+.+|+|.+|.--
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~L 113 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 113 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 35678889999998887766 999999999887 63377889999999999999999999999999999999998766
Q ss_pred HHHHH
Q 011349 458 QAAAL 462 (488)
Q Consensus 458 ~g~~~ 462 (488)
+..+-
T Consensus 114 k~~i~ 118 (126)
T 1nzn_A 114 ERLID 118 (126)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.68 E-value=5.7e-05 Score=72.25 Aligned_cols=77 Identities=14% Similarity=0.102 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.++..+...|..++..|++++|+..+++|+.++| +..+|..+|.++...|++++|++.|++|+.++|.....++..+
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~--s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~~ 351 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM--SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIEN 351 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHHHhC
Confidence 4566777788888889999999999999999997 5677888999999999999999999999999999865443333
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00013 Score=68.84 Aligned_cols=72 Identities=13% Similarity=0.109 Sum_probs=46.9
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCC-cccccceecCCeeeEEEecC-CCCC
Q 011349 59 VSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERL-VNLIGCCCEGEERLLVAEFM-PNET 136 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~gs 136 (488)
++.|+.|..+.+|+. ..+++|+...... ......+|+.+++.+...++ +++++++ .+.-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 567788999999998 4488898865321 11234578888888853333 4666543 33457899999 7655
Q ss_pred hh
Q 011349 137 LS 138 (488)
Q Consensus 137 L~ 138 (488)
|.
T Consensus 95 l~ 96 (301)
T 3dxq_A 95 MS 96 (301)
T ss_dssp CC
T ss_pred CC
Confidence 53
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.65 E-value=6.3e-05 Score=73.91 Aligned_cols=98 Identities=16% Similarity=-0.006 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..|++.+.++...|+|+.|..+..+ |...|+ . ...+..+|.+.|++++|+..+++++.+++.+..++..+|.
T Consensus 175 ~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad-~---l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~i 249 (449)
T 1b89_A 175 NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHAD-E---LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAI 249 (449)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHH-H---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHh-h---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 5678999999999999999999888876 446776 3 3357788999999999999999999999999999999999
Q ss_pred HHH--hCCChHHHHHHHHHhhcccc
Q 011349 461 ALF--GLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 461 ~~~--~~~~~~~A~~~~~~al~l~p 483 (488)
+|. +.++..|+++.|...+.+.|
T Consensus 250 l~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 250 LYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp HHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 884 57788999999988888776
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=5.6e-05 Score=75.11 Aligned_cols=85 Identities=12% Similarity=-0.063 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc-----CCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-----C
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDG-----GTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI-----S 448 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-----~ 448 (488)
.-+..+.+.|.++..+|+|++|+..|++++++ .|++ -...++|+|.+|..+|++++|+..+++|+++ .
T Consensus 327 ~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG 406 (429)
T 3qwp_A 327 YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHG 406 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcC
Confidence 45778899999999999999999999999953 3431 4467999999999999999999999999965 5
Q ss_pred CCCH---HHHHHHHHHHHhC
Q 011349 449 PDWP---TAFYLQAAALFGL 465 (488)
Q Consensus 449 p~~~---~a~~~~g~~~~~~ 465 (488)
|+++ +++.+++.++..+
T Consensus 407 ~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 407 REHSLIEDLILLLEECDANI 426 (429)
T ss_dssp TTSHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHH
Confidence 7765 4556677666543
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=9.4e-05 Score=73.41 Aligned_cols=74 Identities=11% Similarity=0.041 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhcc-----CCCC--chHHHhcHHHHHHhhCCHHHHHHHHHHHHHh-----C
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDG-----GTMV--SPTVFARRCLCYLLSDMPQEALGDAMQAQVI-----S 448 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l-----~ 448 (488)
.-+..+.+.|.+|..+|+|++|+..|++++++ .|++ -+..++|+|.+|..+|+|++|+..|++|+++ .
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG 417 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHG 417 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcC
Confidence 55788999999999999999999999999953 4441 4467999999999999999999999999975 5
Q ss_pred CCCHHH
Q 011349 449 PDWPTA 454 (488)
Q Consensus 449 p~~~~a 454 (488)
|+++..
T Consensus 418 ~~Hp~~ 423 (433)
T 3qww_A 418 KDHPYI 423 (433)
T ss_dssp TTCHHH
T ss_pred CCChHH
Confidence 777653
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0003 Score=67.34 Aligned_cols=77 Identities=8% Similarity=-0.039 Sum_probs=42.0
Q ss_pred cccCCCCCCce-EEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCC--CCcccccceecCCeeeEEEecCCCC
Q 011349 59 VSEHGEKAPNV-VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSE--RLVNLIGCCCEGEERLLVAEFMPNE 135 (488)
Q Consensus 59 ~~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~g 135 (488)
++.|+.|.... +|+....+|..+++|...... ...+..|+.+++.+... .+++++.+....+ ++|||++.+.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 34565554444 667765446667777654332 13455677888777432 3566776543333 7899999776
Q ss_pred Chhhh
Q 011349 136 TLSKH 140 (488)
Q Consensus 136 sL~~~ 140 (488)
++.+.
T Consensus 98 ~l~~~ 102 (333)
T 3csv_A 98 LFTEV 102 (333)
T ss_dssp BHHHH
T ss_pred chHHH
Confidence 66543
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00036 Score=67.86 Aligned_cols=138 Identities=14% Similarity=0.149 Sum_probs=84.0
Q ss_pred cccCCCCCCceEEEEEeC--------CCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceecCCeeeEEE
Q 011349 59 VSEHGEKAPNVVYKGLVD--------EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 129 (488)
++.+..|-...+|++... +++.|.+|+.... ......+.+|..+++.+. +.-.+++++.+.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 456777888999999864 2467999986432 234566779999999985 3334667766543 2899
Q ss_pred ecCCCCChhhh-h----------------ccCC---CCCC--CHHHHHHHHHHHHH-------------------HHHHH
Q 011349 130 EFMPNETLSKH-L----------------FHWE---NQPM--KWAMRVRVALYLAQ-------------------ALDYC 168 (488)
Q Consensus 130 e~~~~gsL~~~-l----------------~~~~---~~~l--~~~~~~~i~~~i~~-------------------~l~~L 168 (488)
||++|.+|... + +... .... -+.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998766421 1 0000 1112 24556666554422 23333
Q ss_pred H----hCC---CcccccccCCceeecCC----CCCeeccCCCcc
Q 011349 169 S----SKG---RALYHDLNTYRILFDQD----GNPRLSCFGLMK 201 (488)
Q Consensus 169 H----~~~---~iiH~Dlkp~Nill~~~----~~~kl~Dfgla~ 201 (488)
. ..+ .++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2 221 17999999999999876 788999999864
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00036 Score=55.79 Aligned_cols=82 Identities=5% Similarity=-0.185 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHhcCC---hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKD---FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
.+.+-++.|.++.+..+ ..++|..++..++.+|...-..++.+|..+.++|+|++|.++.+..++..|+|..|.--+
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 35677778877776654 457888888888888854677888888889999999999999999999999988876655
Q ss_pred HHHHH
Q 011349 459 AAALF 463 (488)
Q Consensus 459 g~~~~ 463 (488)
..+-.
T Consensus 119 ~~Ie~ 123 (134)
T 3o48_A 119 SMVED 123 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00076 Score=54.62 Aligned_cols=80 Identities=5% Similarity=-0.160 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHhcCC---hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKD---FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
.+.+.++.|.++.+..+ -.++|..++..+..+|...-...+.+|..+.++|+|++|.++++..|+..|+|.+|.--+
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 45666777777776554 346777777777777754666777777888888888888888888888888777665544
Q ss_pred HHH
Q 011349 459 AAA 461 (488)
Q Consensus 459 g~~ 461 (488)
..+
T Consensus 118 ~~I 120 (144)
T 1y8m_A 118 SMV 120 (144)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00056 Score=67.95 Aligned_cols=74 Identities=18% Similarity=0.279 Sum_probs=52.2
Q ss_pred cccCCCCCCceEEEEEeCC--------CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCC-cccccceecCCeeeEEE
Q 011349 59 VSEHGEKAPNVVYKGLVDE--------DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERL-VNLIGCCCEGEERLLVA 129 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 129 (488)
++.|+.|....||++...+ +..+.+|+.... .....+.+|..+++.+...++ +++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4567888889999998653 467999988432 122567789999999854444 667765542 3899
Q ss_pred ecCCCCChh
Q 011349 130 EFMPNETLS 138 (488)
Q Consensus 130 e~~~~gsL~ 138 (488)
||++|.+|.
T Consensus 152 e~l~G~~l~ 160 (429)
T 1nw1_A 152 EYIPSRPLS 160 (429)
T ss_dssp CCCCEEECC
T ss_pred EEeCCcccC
Confidence 999975553
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0012 Score=53.37 Aligned_cols=70 Identities=9% Similarity=-0.033 Sum_probs=62.8
Q ss_pred chHHHhcHHHHHHhhCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 417 SPTVFARRCLCYLLSDMP---QEALGDAMQAQVISPD-WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~l~p~-~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
....-++.|-++.+..+. .++|..++..++-.|. .-+.+|.+|.+++++|+|++|..+.+..|+.+|++.
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~ 111 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 111 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcH
Confidence 677888999999988764 4799999999999994 568999999999999999999999999999999875
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0013 Score=63.00 Aligned_cols=68 Identities=10% Similarity=0.026 Sum_probs=45.4
Q ss_pred CCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCC---CCCcccccc------eecCCeeeEEEecCC
Q 011349 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS---ERLVNLIGC------CCEGEERLLVAEFMP 133 (488)
Q Consensus 63 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~------~~~~~~~~lv~e~~~ 133 (488)
|.|....||+....+| .+++|+...... ..|+.+++.|.. |++++.+.. ....+..++||+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4555789999987677 799998765431 356666766632 224555432 123467899999999
Q ss_pred CCCh
Q 011349 134 NETL 137 (488)
Q Consensus 134 ~gsL 137 (488)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8766
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0011 Score=52.97 Aligned_cols=70 Identities=9% Similarity=-0.033 Sum_probs=62.4
Q ss_pred chHHHhcHHHHHHhhCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 417 SPTVFARRCLCYLLSDMP---QEALGDAMQAQVISPD-WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~~---~~A~~~~~~al~l~p~-~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.+.+-++.|-++.+..+. .++|..++..++.+|. .-+.+|.+|.+++++|+|++|..+.+..|+++|++.
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~ 112 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 112 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCH
Confidence 667888898888888764 4799999999999995 478999999999999999999999999999999875
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0012 Score=65.93 Aligned_cols=75 Identities=12% Similarity=0.063 Sum_probs=49.3
Q ss_pred cccCCCCCCceEEEEEeCC-CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCC-cccccceecCCeeeEEEecCCCCC
Q 011349 59 VSEHGEKAPNVVYKGLVDE-DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERL-VNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
++.|+.|-...+|++...+ +..+++|+..... ...-.-.+|..+++.+...++ +++++.+. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeCCcc
Confidence 3467788889999998755 4678899875432 111123689999999965444 56777663 2 35999999866
Q ss_pred hh
Q 011349 137 LS 138 (488)
Q Consensus 137 L~ 138 (488)
|.
T Consensus 188 l~ 189 (458)
T 2qg7_A 188 LS 189 (458)
T ss_dssp CC
T ss_pred CC
Confidence 53
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 488 | ||||
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 5e-41 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 9e-41 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-40 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-39 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-38 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-38 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-38 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-37 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-35 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-35 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 6e-35 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 9e-35 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-34 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-34 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 3e-34 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 5e-34 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-33 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-33 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-33 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 6e-33 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-32 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-32 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-31 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 1e-31 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 3e-31 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 5e-31 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 5e-31 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 6e-31 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 7e-31 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 6e-30 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-29 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-29 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 5e-28 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-27 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-27 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-27 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-26 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-26 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 7e-26 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 9e-26 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-25 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 5e-25 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 6e-25 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-24 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-23 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 7e-23 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-22 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 3e-22 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-21 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-21 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-21 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-21 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 3e-21 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-20 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 5e-20 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 4e-19 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-18 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-16 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-15 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-14 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 9e-14 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-12 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 4e-06 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 4e-05 | |
| d1elra_ | 128 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 4e-04 | |
| d1kt1a1 | 168 | a.118.8.1 (A:254-421) FKBP51, C-terminal domain {M | 0.003 | |
| d1p5qa1 | 170 | a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal d | 0.004 |
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 146 bits (369), Expect = 5e-41
Identities = 52/255 (20%), Positives = 104/255 (40%), Gaps = 12/255 (4%)
Query: 69 VVYKG-LVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
VY+G +AVK + +FL+EA + ++ LV L+G C +
Sbjct: 32 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
+ EFM L +L Q + + + +A ++ A++Y K ++ DL L
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVG 149
Query: 188 QDGNPRLSCFGLMKNSRDGKSYST-----NLAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242
++ +++ FGL + + + +T PE L + +S V++FG LL ++
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 243 LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKS 302
+ P +DL L++ ++ L C Q+ P +RP+
Sbjct: 210 ATYGM-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 265
Query: 303 LVASLTPLQKEAEVP 317
+ + + +E+ +
Sbjct: 266 IHQAFETMFQESSIS 280
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (365), Expect = 9e-41
Identities = 53/244 (21%), Positives = 104/244 (42%), Gaps = 12/244 (4%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
VV G +A+K + + +F+EEA+ + L E+LV L G C + ++
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N L +L + + + + +A++Y SK L+ DL L +
Sbjct: 78 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVND 135
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
G ++S FGL + D + S+ + ++PPE L + +S +++FG L+ ++
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195
Query: 244 SGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
S +P + L + + ++ + C + ERP K L
Sbjct: 196 SLGKMPYER----FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251
Query: 304 VASL 307
++++
Sbjct: 252 LSNI 255
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (363), Expect = 2e-40
Identities = 52/249 (20%), Positives = 99/249 (39%), Gaps = 12/249 (4%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
+V+ G +A+K A F+EEA + L +LV L G C E LV
Sbjct: 20 LVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
EFM + LS + + + + L + + + Y ++ DL L +
Sbjct: 79 FEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGE 136
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
+ ++S FG+ + D + S+ + + PE R +S V+SFG L+ ++
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
Query: 244 SGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
S IP + + + + + + T + ++ + C + P +RP L
Sbjct: 197 SEGKIPYENRSN----SEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252
Query: 304 VASLTPLQK 312
+ L + +
Sbjct: 253 LRQLAEIAE 261
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (358), Expect = 1e-39
Identities = 60/280 (21%), Positives = 108/280 (38%), Gaps = 30/280 (10%)
Query: 40 EFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLE 99
N+ +L+ ++ G+ V G +AVK A ++ FL
Sbjct: 3 ALNMKELK----------LLQTIGKGEFGDVMLG-DYRGNKVAVKCIKNDA--TAQAFLA 49
Query: 100 EARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVA 158
EA + LR LV L+G E + L +V E+M +L +L + ++ +
Sbjct: 50 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 109
Query: 159 LYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN-SRDGKSYSTNLAFTP 217
L + +A++Y ++ DL +L +D ++S FGL K S + + +T
Sbjct: 110 LDVCEAMEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 168
Query: 218 PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEG 272
PE LR + +S V+SFG LL ++ S +P + + + D C
Sbjct: 169 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP- 227
Query: 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
+ + C + RP+ L L ++
Sbjct: 228 --------AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 259
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 139 bits (351), Expect = 2e-38
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 22/249 (8%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + + FL EA + L+ +RLV L + E ++
Sbjct: 28 EVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSD 144
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
+ +++ FGL + D + + + +T PE + G +S V+SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 244 SGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298
+ IP + + ++ D+C E EL +L C + P +RP
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRP 255
Query: 299 NAKSLVASL 307
L + L
Sbjct: 256 TFDYLRSVL 264
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 139 bits (351), Expect = 2e-38
Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 13/256 (5%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +A+K FL+EA+ + LR E+LV L E E +V
Sbjct: 32 EVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 89
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M +L L + ++ V +A +A + Y ++ DL IL +
Sbjct: 90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGE 148
Query: 189 DGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
+ +++ FGL + D + + + +T PE GR +S V+SFG LL +L
Sbjct: 149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208
Query: 244 SGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
+ +P ++ + L ++ + L L +C + EP ERP + L
Sbjct: 209 TKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 264
Query: 304 VASLTPLQKEAEVPSY 319
A L E P Y
Sbjct: 265 QAFLEDYFTSTE-PQY 279
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 5e-38
Identities = 60/260 (23%), Positives = 110/260 (42%), Gaps = 24/260 (9%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126
VYKG D +AVK N +A + F E + R ++ +G +
Sbjct: 23 TVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 79
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
+V ++ +L HL H + + +A AQ +DY +K ++ DL + I
Sbjct: 80 IVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKSI-IHRDLKSNNIFL 137
Query: 187 DQDGNPRLSCFGL--MKNSRDGKSYSTNLAFTP----PEYLRT---GRVIPESVVYSFGT 237
+D ++ FGL +K+ G L+ + PE +R +S VY+FG
Sbjct: 138 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197
Query: 238 LLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293
+L +L++G+ +I + + G+ +L S + + + RL + CL+ +
Sbjct: 198 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKK 253
Query: 294 PRERPNAKSLVASLTPLQKE 313
ERP ++AS+ L +
Sbjct: 254 RDERPLFPQILASIELLARS 273
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 137 bits (347), Expect = 1e-37
Identities = 54/292 (18%), Positives = 107/292 (36%), Gaps = 26/292 (8%)
Query: 41 FNLDQLRAATSGFCADNIVSEH------GEKAPNVVYKGLVDED----RWIAVKRFNRSA 90
F + A F + +S G V G + ++A+K
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 91 WPDS-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPM 149
R FL EA +G +++L G + +++ EFM N +L +
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125
Query: 150 KWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY 209
V + +A + Y + ++ DL IL + + ++S FGL + D S
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 210 STN---------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK 260
T + +T PE ++ + S V+S+G ++ +++S P + +
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQ 240
Query: 261 NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
+ + ++ D + L +L C Q + RP +V +L + +
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 2e-35
Identities = 51/277 (18%), Positives = 95/277 (34%), Gaps = 44/277 (15%)
Query: 69 VVYKG-LVDEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLIGCCCEGEERL 126
VV+K +A K + P R Q + E + + S +V G E
Sbjct: 21 VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 80
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
+ E M +L + L + + + +V++ + + L Y K + ++ D+ IL
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+ G +L FG+ D + S ++ PE L+ +S ++S G L+++
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 245 GKH----------------------------------IPPSHALDLIRGKNFLMLMDSCL 270
G++ S+ +D L+D +
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 258
Query: 271 EGHF----SNDDGTELVRLASRCLQYEPRERPNAKSL 303
S E ++CL P ER + K L
Sbjct: 259 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (328), Expect = 2e-35
Identities = 53/274 (19%), Positives = 94/274 (34%), Gaps = 29/274 (10%)
Query: 39 REFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKG-LVDEDRWIAVKRFNRSAWPDS--- 94
R++ L+ I G+ VY +A+K ++ +
Sbjct: 1 RQWALEDFE----------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE 50
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
Q E LR ++ L G + L+ E+ P T+ + L
Sbjct: 51 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRT 108
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-- 212
LA AL YC SK ++ D+ +L G +++ FG ++ + +
Sbjct: 109 ATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 167
Query: 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
L + PPE + + ++S G L + L GK PP +
Sbjct: 168 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PP------FEANTYQETYKRISRV 219
Query: 273 HFSNDDG--TELVRLASRCLQYEPRERPNAKSLV 304
F+ D L SR L++ P +RP + ++
Sbjct: 220 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 253
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (328), Expect = 6e-35
Identities = 55/268 (20%), Positives = 104/268 (38%), Gaps = 26/268 (9%)
Query: 69 VVYKGLVDEDR----WIAVKRFNRSAWPDS-RQFLEEARAVGLLRSERLVNLIGCCCEGE 123
VY G + ++ AVK NR QFL E + +++L+G C E
Sbjct: 42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101
Query: 124 ER-LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTY 182
L+V +M + L ++ E + L +A+ + + +SK ++ DL
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF-VHRDLAAR 159
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYS 234
+ D+ +++ FGL ++ D + S + + + E L+T + +S V+S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 235 FGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH---FSNDDGTELVRLASRCLQ 291
FG LL +L++ P N + L+G L + +C
Sbjct: 220 FGVLLWELMTRGAPPYP-------DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 272
Query: 292 YEPRERPNAKSLVASLTPLQKEAEVPSY 319
+ RP+ LV+ ++ + Y
Sbjct: 273 PKAEMRPSFSELVSRISAIFSTFIGEHY 300
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 9e-35
Identities = 55/265 (20%), Positives = 107/265 (40%), Gaps = 36/265 (13%)
Query: 69 VVYKGL------VDEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLIGCCCE 121
+VY+G+ + + +A+K N +A R +FL EA + +V L+G +
Sbjct: 35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94
Query: 122 GEERLLVAEFMPNETLSKHLFHW--------ENQPMKWAMRVRVALYLAQALDYCSSKGR 173
G+ L++ E M L +L P + +++A +A + Y ++
Sbjct: 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 154
Query: 174 ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVI 227
++ DL + +D ++ FG+ ++ + Y + + PE L+ G
Sbjct: 155 -VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213
Query: 228 PESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282
S V+SFG +L ++ + P L + L D+C + L
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 264
Query: 283 VRLASRCLQYEPRERPNAKSLVASL 307
L C QY P+ RP+ +++S+
Sbjct: 265 FELMRMCWQYNPKMRPSFLEIISSI 289
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 129 bits (326), Expect = 1e-34
Identities = 48/243 (19%), Positives = 83/243 (34%), Gaps = 14/243 (5%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDS---RQFLEEARAVGLLRSERLVNLIGCCCEGEE 124
VY V +A+K+ + S + + ++E R + LR + GC
Sbjct: 30 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89
Query: 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
LV E+ H +P++ V Q L Y S ++ D+ I
Sbjct: 90 AWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNI 146
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLD 241
L + G +L FG S+ + PE + G+ + V+S G ++
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 242 LLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 301
L K + + GH+S CLQ P++RP ++
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSE 262
Query: 302 SLV 304
L+
Sbjct: 263 VLL 265
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (323), Expect = 2e-34
Identities = 53/255 (20%), Positives = 96/255 (37%), Gaps = 28/255 (10%)
Query: 69 VVYKGLV---DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEE 124
V +G+ + +A+K + D+ + + EA+ + L + +V LIG C + E
Sbjct: 24 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 82
Query: 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
+LV E L K L + + + + + ++ + Y K ++ DL +
Sbjct: 83 LMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNV 140
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESVVYSFGT 237
L ++S FGL K SY T L + PE + + S V+S+G
Sbjct: 141 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 200
Query: 238 LLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292
+ + LS P + I + C EL L S C Y
Sbjct: 201 TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWIY 251
Query: 293 EPRERPNAKSLVASL 307
+ +RP+ ++ +
Sbjct: 252 KWEDRPDFLTVEQRM 266
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (320), Expect = 3e-34
Identities = 55/262 (20%), Positives = 98/262 (37%), Gaps = 30/262 (11%)
Query: 69 VVYKGLVDE---DRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGE 123
V KG + +AVK A + + L EA + L + +V +IG C E E
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 80
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
+LV E L+K+L +N+ +K + + ++ + Y ++ DL
Sbjct: 81 SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARN 137
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESVVYSFG 236
+L ++S FGL K R ++Y + + PE + + +S V+SFG
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197
Query: 237 TLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQ 291
L+ + S P S ++ + C E+ L + C
Sbjct: 198 VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCWT 248
Query: 292 YEPRERPNAKSLVASLTPLQKE 313
Y+ RP ++ L +
Sbjct: 249 YDVENRPGFAAVELRLRNYYYD 270
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (319), Expect = 5e-34
Identities = 50/270 (18%), Positives = 94/270 (34%), Gaps = 28/270 (10%)
Query: 55 ADN--IVSEHGEKAPNVVYKG-LVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRS 109
A++ ++ G + K + + + K + + ++ + + E + L+
Sbjct: 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 62
Query: 110 ERLVNLIGCCCEGEERLL--VAEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQAL 165
+V + L V E+ L+ + E Q + +RV L AL
Sbjct: 63 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 122
Query: 166 DYCSSKGRALYH----DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP---- 217
C + + DL + D N +L FGL + S++ TP
Sbjct: 123 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 182
Query: 218 PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277
PE + +S ++S G LL +L + PP + L EG F
Sbjct: 183 PEQMNRMSYNEKSDIWSLGCLLYELCALM--PPFT------AFSQKELAGKIREGKFRRI 234
Query: 278 DGT---ELVRLASRCLQYEPRERPNAKSLV 304
EL + +R L + RP+ + ++
Sbjct: 235 PYRYSDELNEIITRMLNLKDYHRPSVEEIL 264
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 1e-33
Identities = 48/260 (18%), Positives = 98/260 (37%), Gaps = 19/260 (7%)
Query: 69 VVYKGLVDED-----RWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLIGCCCEG 122
VYKG++ +A+K R FL EA +G ++ L G +
Sbjct: 22 EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 81
Query: 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTY 182
+ +++ E+M N ++ V + +A + Y ++ + DL
Sbjct: 82 KPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAAR 139
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESVVYSF 235
IL + + ++S FGL + D + + +T PE + + S V+SF
Sbjct: 140 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 199
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
G ++ ++++ P + + ++ D + + +L +C Q E
Sbjct: 200 GIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERA 255
Query: 296 ERPNAKSLVASLTPLQKEAE 315
RP +V+ L L + +
Sbjct: 256 RRPKFADIVSILDKLIRAPD 275
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 1e-33
Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 23/262 (8%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
VY + V + +A+++ N P + E + ++ +VN + G+E +
Sbjct: 35 TVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
V E++ +L+ + M V QAL++ S ++ D+ + IL
Sbjct: 95 VMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLG 150
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLL 243
DG+ +L+ FG +S + + TP PE + P+ ++S G + ++++
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 244 SGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
G+ PP + +R +L+ + E +RCL + +R +AK L
Sbjct: 211 EGE--PPYLNENPLR-ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
Query: 304 -----------VASLTPLQKEA 314
++SLTPL A
Sbjct: 268 LQHQFLKIAKPLSSLTPLIAAA 289
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 125 bits (315), Expect = 3e-33
Identities = 58/284 (20%), Positives = 106/284 (37%), Gaps = 50/284 (17%)
Query: 69 VVYKG------LVDEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLIGCCCE 121
V++ + +AVK A D + F EA + + +V L+G C
Sbjct: 28 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87
Query: 122 GEERLLVAEFMPNETLSKHLFHW----------------------ENQPMKWAMRVRVAL 159
G+ L+ E+M L++ L P+ A ++ +A
Sbjct: 88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 147
Query: 160 YLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------L 213
+A + Y S + ++ DL T L ++ +++ FGL +N Y + +
Sbjct: 148 QVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 206
Query: 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDS 268
+ PPE + R ES V+++G +L ++ S P + +R N L ++
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266
Query: 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
C EL L C P +RP+ S+ L + +
Sbjct: 267 CPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 6e-33
Identities = 54/269 (20%), Positives = 98/269 (36%), Gaps = 27/269 (10%)
Query: 69 VVYKGLVDED---RWIAVKRFNRSAWPDS-RQFLEEARAVG-LLRSERLVNLIGCCCEGE 123
V K + +D A+KR A D R F E + L ++NL+G C
Sbjct: 25 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 84
Query: 124 ERLLVAEFMPNETLSKHL--------------FHWENQPMKWAMRVRVALYLAQALDYCS 169
L E+ P+ L L + + + A +A+ +DY S
Sbjct: 85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 144
Query: 170 SKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRV 226
K ++ DL IL ++ +++ FGL + + + + E L
Sbjct: 145 QKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY 203
Query: 227 IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286
S V+S+G LL +++S P + + + E+ L
Sbjct: 204 TTNSDVWSYGVLLWEIVSLGG-TPYCGMTC---AELYEKLPQGYRLEKPLNCDDEVYDLM 259
Query: 287 SRCLQYEPRERPNAKSLVASLTPLQKEAE 315
+C + +P ERP+ ++ SL + +E +
Sbjct: 260 RQCWREKPYERPSFAQILVSLNRMLEERK 288
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (306), Expect = 3e-32
Identities = 54/260 (20%), Positives = 95/260 (36%), Gaps = 27/260 (10%)
Query: 69 VVYKGLV----DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGE 123
V++G+ + +A+K R+ FL+EA + +V LIG E
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP 81
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
++ E L + + A + A L+ AL Y SK ++ D+
Sbjct: 82 -VWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARN 138
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEY-----LRTGRVIPESVVYSFGTL 238
+L + +L FGL + D Y + P ++ + R S V+ FG
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 239 LLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293
+ ++L P + + I L + +C L L ++C Y+
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 249
Query: 294 PRERPNAKSLVASLTPLQKE 313
P RP L A L+ + +E
Sbjct: 250 PSRRPRFTELKAQLSTILEE 269
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (309), Expect = 3e-32
Identities = 40/259 (15%), Positives = 98/259 (37%), Gaps = 19/259 (7%)
Query: 69 VVYKGLVDED-----RWIAVKRFNRSAWPDS-RQFLEEARAVGLLRSERLVNLIGCCCEG 122
VYKGL + +A+K + P + ++ L+EA + + + + L+G C
Sbjct: 24 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83
Query: 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTY 182
+L+ + MP L + + + + +A+ ++Y + ++ DL
Sbjct: 84 TVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL-VHRDLAAR 140
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFG 236
+L + +++ FGL K + + + E + +S V+S+G
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 237 TLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 296
+ +L++ P D I +++ ++ + +C +
Sbjct: 201 VTVWELMTFGSKPY----DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 256
Query: 297 RPNAKSLVASLTPLQKEAE 315
RP + L+ + + ++ +
Sbjct: 257 RPKFRELIIEFSKMARDPQ 275
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 1e-31
Identities = 44/256 (17%), Positives = 86/256 (33%), Gaps = 15/256 (5%)
Query: 58 IVSEHGEKAPNVVYKG-LVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI 116
I+ E G+ A VYK + A K + + + ++ E + +V L+
Sbjct: 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75
Query: 117 GCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
++ EF + + +P+ + V AL+Y ++
Sbjct: 76 DAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK-IIH 133
Query: 177 HDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST----NLAFTPPEYLRT-----GRVI 227
DL ILF DG+ +L+ FG+ + + PE +
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193
Query: 228 PESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287
++ V+S G L+++ + PP H L+ +R + + +
Sbjct: 194 YKADVWSLGITLIEMAEIE--PPHHELNPMR-VLLKIAKSEPPTLAQPSRWSSNFKDFLK 250
Query: 288 RCLQYEPRERPNAKSL 303
+CL+ R L
Sbjct: 251 KCLEKNVDARWTTSQL 266
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (305), Expect = 1e-31
Identities = 51/275 (18%), Positives = 95/275 (34%), Gaps = 41/275 (14%)
Query: 69 VVYKGLVDEDR------WIAVKRFNRSAWPDSRQ-FLEEARAVG-LLRSERLVNLIGCCC 120
V +AVK A R+ + E + + L E +VNL+G C
Sbjct: 52 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111
Query: 121 EGEERLLVAEFMPNETLSKHLF---------------------HWENQPMKWAMRVRVAL 159
L+ E+ L +L + + + + A
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171
Query: 160 YLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------ 212
+A+ +++ K H DL +L ++ FGL ++ +Y
Sbjct: 172 QVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 229
Query: 213 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
+ + PE L G +S V+S+G LL ++ S P + NF L+ + +
Sbjct: 230 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---GIPVDANFYKLIQNGFKM 286
Query: 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
E+ + C ++ R+RP+ +L + L
Sbjct: 287 DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (301), Expect = 3e-31
Identities = 41/289 (14%), Positives = 92/289 (31%), Gaps = 46/289 (15%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE----E 124
V++G +AVK F+ S E +LR E ++ I + +
Sbjct: 18 EVWRG-KWRGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75
Query: 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH------- 177
LV+++ + +L +L + +++AL A L + +
Sbjct: 76 LWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 132
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSY----STNLAFTP----PEYLRT------ 223
DL + IL ++G ++ GL + T PE L
Sbjct: 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 192
Query: 224 GRVIPESVVYSFGTLLLDLLSGKHIPPSH---------------ALDLIRGKNFLMLMDS 268
+ +Y+ G + ++ I H +++ +R +
Sbjct: 193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 252
Query: 269 CLEGHFSNDDGT-ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
+ + + + + ++ C R A + +L+ L ++ +
Sbjct: 253 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 5e-31
Identities = 47/247 (19%), Positives = 89/247 (36%), Gaps = 17/247 (6%)
Query: 69 VVYKG-LVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEER 125
VYKG + +A S ++F EEA + L+ +V +
Sbjct: 24 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 83
Query: 126 ----LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DLN 180
+LV E M + TL +L + MK + + + L + ++ + H DL
Sbjct: 84 KKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141
Query: 181 TYRILF-DQDGNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESVVYSFGT 237
I G+ ++ GL R + + F PE + VY+FG
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGM 200
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+L++ + ++ P S + + + + F E+ + C++ ER
Sbjct: 201 CMLEMATSEY-PYSECQN--AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 257
Query: 298 PNAKSLV 304
+ K L+
Sbjct: 258 YSIKDLL 264
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (300), Expect = 5e-31
Identities = 50/269 (18%), Positives = 94/269 (34%), Gaps = 34/269 (12%)
Query: 69 VVYKGLV------DEDRWIAVKRFNRSAWPDSRQ-FLEEARAVG-LLRSERLVNLIGCCC 120
V + D +AVK SA R+ + E + + L +VNL+G C
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
Query: 121 EGEERLLVAEFMPNETLSKHLFHW----------------ENQPMKWAMRVRVALYLAQA 164
G L++ E+ L L + + + + +A+
Sbjct: 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157
Query: 165 LDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPP 218
+ + +SK ++ DL IL ++ FGL ++ ++ +Y + + P
Sbjct: 158 MAFLASKNC-IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 219 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278
E + ES V+S+G L +L S P + F ++
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG---MPVDSKFYKMIKEGFRMLSPEHA 273
Query: 279 GTELVRLASRCLQYEPRERPNAKSLVASL 307
E+ + C +P +RP K +V +
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 120 bits (302), Expect = 6e-31
Identities = 46/241 (19%), Positives = 79/241 (32%), Gaps = 10/241 (4%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
VV++ A K D +E + + +LR LVNL + E ++
Sbjct: 41 VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
+ EFM L + + E+ M V + + L + ++ DL I+F
Sbjct: 101 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFT 158
Query: 188 QDGNPR--LSCFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242
+ L FGL + +S F PE V + ++S G L L
Sbjct: 159 TKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 218
Query: 243 LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKS 302
LSG P + + D ++ + + + L +P R
Sbjct: 219 LSGL--SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ 276
Query: 303 L 303
Sbjct: 277 A 277
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 7e-31
Identities = 49/258 (18%), Positives = 83/258 (32%), Gaps = 18/258 (6%)
Query: 69 VVYKG-LVDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERL 126
V + +AVK + D + +E +L E +V G EG +
Sbjct: 20 EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 79
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
L E+ L + + M R L + Y G + D+ +L
Sbjct: 80 LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGI-THRDIKPENLLL 136
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESV-VYSFGTLL 239
D+ N ++S FGL R L + PE L+ E V V+S G +L
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
Query: 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+L+G+ + + + + + + L + L P R
Sbjct: 197 TAMLAGELPWDQPSDSCQ---EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 253
Query: 300 AKSLVAS---LTPLQKEA 314
+ PL+K A
Sbjct: 254 IPDIKKDRWYNKPLKKGA 271
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (289), Expect = 6e-30
Identities = 53/263 (20%), Positives = 90/263 (34%), Gaps = 32/263 (12%)
Query: 69 VVYKGLVD----EDRWIAVKRFNRSAWPDS---RQFLEEARAVGLLRSERLVNLIGCCCE 121
VV +G D + +AVK F+ E A+ L L+ L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
+ +V E P +L R A+ +A+ + Y SK ++ DL
Sbjct: 83 PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVIPESVVYS 234
+L ++ FGLM+ + A+ PE L+T S +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 235 FGTLLLDLLSGKHIP-----PSHALDLI-RGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288
FG L ++ + P S L I + L + C + ++ + +
Sbjct: 200 FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ---------DIYNVMVQ 250
Query: 289 CLQYEPRERPNAKSLVASLTPLQ 311
C ++P +RP +L L Q
Sbjct: 251 CWAHKPEDRPTFVALRDFLLEAQ 273
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 116 bits (291), Expect = 2e-29
Identities = 45/241 (18%), Positives = 81/241 (33%), Gaps = 10/241 (4%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
VV++ + R K N D E + L +L+NL + E +L
Sbjct: 44 VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 103
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
+ EF+ L + E+ M A + + L + ++ D+ I+ +
Sbjct: 104 ILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSI-VHLDIKPENIMCE 161
Query: 188 --QDGNPRLSCFGLMKNSRDGKS---YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242
+ + ++ FGL + + F PE + V + +++ G L L
Sbjct: 162 TKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 221
Query: 243 LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKS 302
LSG P D + + D + + E LQ EPR+R
Sbjct: 222 LSGL--SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHD 279
Query: 303 L 303
Sbjct: 280 A 280
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (286), Expect = 5e-29
Identities = 39/258 (15%), Positives = 91/258 (35%), Gaps = 23/258 (8%)
Query: 58 IVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI 116
I + G +V++ + + K D +E + + R +++L
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLH 67
Query: 117 GCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
EE +++ EF+ + + + + + V + +AL + S +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNIG-H 125
Query: 177 HDLNTYRILFDQDGNPR--LSCFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVIPESV 231
D+ I++ + + FG + + G ++ + PE + V +
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 232 VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT------ELVRL 285
++S GTL+ LLSG + + ++++ + ++ D+ E +
Sbjct: 186 MWSLGTLVYVLLSGIN--------PFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF 237
Query: 286 ASRCLQYEPRERPNAKSL 303
R L E + R A
Sbjct: 238 VDRLLVKERKSRMTASEA 255
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 111 bits (278), Expect = 5e-28
Identities = 39/242 (16%), Positives = 73/242 (30%), Gaps = 11/242 (4%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERL 126
V + +A+K + A E + ++ +V L G
Sbjct: 24 EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRA--LYHDLNTYRI 184
L+ + + L + E R+ + A+ Y G N
Sbjct: 84 LIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 141
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
D+D +S FGL K G ST + PE L +S G +
Sbjct: 142 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201
Query: 242 LLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAK 301
LL G PP + + + ++ + + + +D ++ +P +R +
Sbjct: 202 LLCGY--PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 259
Query: 302 SL 303
Sbjct: 260 QA 261
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (274), Expect = 1e-27
Identities = 39/255 (15%), Positives = 79/255 (30%), Gaps = 23/255 (9%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDS---RQFLEEARAVGLLRSERLVNLIGCCCEGEE 124
V + R A+K + E + L V L + E+
Sbjct: 23 TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK 82
Query: 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
+ N L K++ + AL+Y K ++ DL I
Sbjct: 83 LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENI 139
Query: 185 LFDQDGNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTL 238
L ++D + +++ FG K S+ + PE L S +++ G +
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI 199
Query: 239 LLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT--ELVRLASRCLQYEPRE 296
+ L++G PP R N ++ ++ + + + L + L + +
Sbjct: 200 IYQLVAGL--PP------FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 251
Query: 297 RPNAKSLVASLTPLQ 311
R + +
Sbjct: 252 RLGCEEMEGYGPLKA 266
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (272), Expect = 2e-27
Identities = 53/271 (19%), Positives = 98/271 (36%), Gaps = 33/271 (12%)
Query: 69 VVYKGLVDED------RWIAVKRFNRSAWPDS-RQFLEEARAVGLLRSER-LVNLIGCCC 120
V + R +AVK A R + E + + + +VNL+G C
Sbjct: 28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87
Query: 121 E-GEERLLVAEFMPNETLSKHLFHWENQ--------------PMKWAMRVRVALYLAQAL 165
+ G +++ EF LS +L N+ + + + +A+ +
Sbjct: 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPE 219
++ +S+ ++ DL IL + ++ FGL ++ Y L + PE
Sbjct: 148 EFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279
+ +S V+SFG LL ++ S P + + + F + +
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKID--EEFCRRLKEGTRMRAPDYTT 263
Query: 280 TELVRLASRCLQYEPRERPNAKSLVASLTPL 310
E+ + C EP +RP LV L L
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 110 bits (276), Expect = 2e-27
Identities = 49/248 (19%), Positives = 87/248 (35%), Gaps = 16/248 (6%)
Query: 69 VVYKG-LVDEDRWIAVKRFNRSAWPDS---RQFLEEARAVGLLRSER---LVNLIGCCCE 121
VY D + A+K ++ L E + L+ + +V +
Sbjct: 19 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 78
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
++ + + M L HL ++ A A + L++ ++ +Y DL
Sbjct: 79 PDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFV-VYRDLKP 135
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTN--LAFTPPEYLRTGRVIPESV-VYSFGTL 238
IL D+ G+ R+S GL + K +++ + PE L+ G S +S G +
Sbjct: 136 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195
Query: 239 LLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298
L LL G H + K+ + M + + EL L LQ + R
Sbjct: 196 LFKLLRGHSPFRQHKT---KDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 252
Query: 299 NAKSLVAS 306
A
Sbjct: 253 GCLGRGAQ 260
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (269), Expect = 1e-26
Identities = 46/245 (18%), Positives = 83/245 (33%), Gaps = 22/245 (8%)
Query: 69 VVYKG-LVDEDRWIAVKRFNRSAWPDS----RQFLEEARAVGLLRSERLVNLIGCCCEGE 123
V+ +++ A+K + +E+ L ++ E
Sbjct: 17 KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 76
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
V E++ L H+ + A + L + SKG +Y DL
Sbjct: 77 NLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDN 133
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVIPESVVYSFGTLL 239
IL D+DG+ +++ FG+ K + G + + T PE L + +SFG LL
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193
Query: 240 LDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG--TELVRLASRCLQYEPRER 297
++L G+ G++ L S + E L + EP +R
Sbjct: 194 YEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 245
Query: 298 PNAKS 302
+
Sbjct: 246 LGVRG 250
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 105 bits (263), Expect = 4e-26
Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 25/255 (9%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDS---------RQFLEEARAVGLLRSER-LVNLIG 117
VV + + + AVK + + L+E + + ++ L
Sbjct: 18 VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 77
Query: 118 CCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
LV + M L +L E + ++ L + + +
Sbjct: 78 TYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLNIV-HR 134
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVI------P 228
DL IL D D N +L+ FG G+ ++ PE +
Sbjct: 135 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 194
Query: 229 ESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288
E ++S G ++ LL+G PP + +M + +D + L SR
Sbjct: 195 EVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252
Query: 289 CLQYEPRERPNAKSL 303
L +P++R A+
Sbjct: 253 FLVVQPQKRYTAEEA 267
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 104 bits (260), Expect = 7e-26
Identities = 51/255 (20%), Positives = 86/255 (33%), Gaps = 21/255 (8%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDS---RQFLEEARAVGLLRSERLVNLIGCCCE--- 121
V+ + R +AVK D +F EA+ L +V +
Sbjct: 22 EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 81
Query: 122 -GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLN 180
G +V E++ TL + PM + V QAL++ G ++ D+
Sbjct: 82 AGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG-IIHRDVK 138
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNL-------AFTPPEYLRTGRVIPESVVY 233
I+ ++ FG+ + D + T + PE R V S VY
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198
Query: 234 SFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYE 293
S G +L ++L+G+ PP + + D +L + + L
Sbjct: 199 SLGCVLYEVLTGE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN 256
Query: 294 PRERP-NAKSLVASL 307
P R A + A L
Sbjct: 257 PENRYQTAAEMRADL 271
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 105 bits (262), Expect = 9e-26
Identities = 41/245 (16%), Positives = 89/245 (36%), Gaps = 18/245 (7%)
Query: 69 VVYKGLVDED-RWIAVKRFNRSAWPDSRQ---FLEEARAVGLLRSERLVNLIGCCCEGEE 124
V+ + R+ A+K + +Q +E + ++ ++ + G + ++
Sbjct: 19 RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ 78
Query: 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
++ +++ L ++Q + A + AL+Y SK +Y DL I
Sbjct: 79 IFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENI 135
Query: 185 LFDQDGNPRLSCFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
L D++G+ +++ FG K D + + PE + T +SFG L+ ++L
Sbjct: 136 LLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 195
Query: 244 SGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT--ELVRLASRCLQYEPRERPNAK 301
+G N + + L ++ L SR + + +R
Sbjct: 196 AGYTPFY--------DSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNL 247
Query: 302 SLVAS 306
Sbjct: 248 QNGTE 252
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (256), Expect = 4e-25
Identities = 50/269 (18%), Positives = 97/269 (36%), Gaps = 35/269 (13%)
Query: 69 VVYKG--------LVDEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSER-LVNLIGC 118
V + +AVK A D + E + ++ + ++NL+G
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87
Query: 119 CCEGEERLLVAEFMPNETLSKHLFHW--------------ENQPMKWAMRVRVALYLAQA 164
C + ++ E+ L ++L + + V A +A+
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 165 LDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPP 218
++Y +SK ++ DL +L +D +++ FGL ++ Y + + P
Sbjct: 148 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 219 EYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278
E L +S V+SFG LL ++ + P + + + L+ ++
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPV---EELFKLLKEGHRMDKPSNC 262
Query: 279 GTELVRLASRCLQYEPRERPNAKSLVASL 307
EL + C P +RP K LV L
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 5e-25
Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 27/248 (10%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRS------AWPDSRQFLEEARAVGLLRS--ERLVNLIGCC 119
VY G+ V ++ +A+K + P+ + E + + S ++ L+
Sbjct: 19 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 78
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ +L+ E E ++ + + +A+ +C + G L+ D+
Sbjct: 79 ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LHRDI 136
Query: 180 NTYRILFDQD-GNPRLSCFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRVIPESV-VYSF 235
IL D + G +L FG +D + ++PPE++R R S V+S
Sbjct: 137 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
G LL D++ G P H ++IRG+ F F +E L CL P
Sbjct: 197 GILLYDMVCGDI-PFEHDEEIIRGQVF-----------FRQRVSSECQHLIRWCLALRPS 244
Query: 296 ERPNAKSL 303
+RP + +
Sbjct: 245 DRPTFEEI 252
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 6e-25
Identities = 39/249 (15%), Positives = 75/249 (30%), Gaps = 19/249 (7%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQ------FLEEARAVGLLRSERLVNLIGCCCE 121
VV K A K + SR+ E + ++ ++ L
Sbjct: 25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
+ +L+ E + L E + + + + Y S A + DL
Sbjct: 85 KTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQIA-HFDLKP 141
Query: 182 YRILFDQDGNPR----LSCFGLMKNSRDGKSYSTNL---AFTPPEYLRTGRVIPESVVYS 234
I+ P+ + FGL G + F PE + + E+ ++S
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 235 FGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEP 294
G + LLSG + ++ E + ++ R L +P
Sbjct: 202 IGVITYILLSGASPFLGDTKQETLAN--VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP 259
Query: 295 RERPNAKSL 303
++R +
Sbjct: 260 KKRMTIQDS 268
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (252), Expect = 1e-24
Identities = 50/269 (18%), Positives = 87/269 (32%), Gaps = 38/269 (14%)
Query: 69 VVYKG-LVDEDRWIAVKRFNRSAWPDS-----RQFLEEARAVGLLRSERLVNLIGCCCEG 122
VYK + ++ +A+K+ ++ R L E + + L ++ L+
Sbjct: 13 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 72
Query: 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTY 182
LV +FM + + + + + L Q L+Y + DL
Sbjct: 73 SNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPN 129
Query: 183 RILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESV-VYSFGT 237
+L D++G +L+ FGL K+ T+ T PE L R+ V +++ G
Sbjct: 130 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 189
Query: 238 LLLDLLSGKHIPPSH-----------------------ALDLIRGKNFLMLMDSCLEGHF 274
+L +LL P L F L F
Sbjct: 190 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF 249
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSL 303
S +L+ L + P R A
Sbjct: 250 SAAG-DDLLDLIQGLFLFNPCARITATQA 277
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 98.0 bits (243), Expect = 2e-23
Identities = 38/270 (14%), Positives = 81/270 (30%), Gaps = 24/270 (8%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCC-EGEERL 126
+Y G + +A+K Q E++ +++ + I C EG+ +
Sbjct: 22 DIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
+V E + LF++ ++ + +A + ++Y SK ++ D+ L
Sbjct: 80 MVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDNFLM 136
Query: 187 ---DQDGNPRLSCFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVIPESVV 232
+ + FGL K RD +++ + +
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 196
Query: 233 YSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD--SCLEGHFSNDDGTELVRLASRCL 290
S G +L+ G R K + S +E + C
Sbjct: 197 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR 256
Query: 291 QYEPRERPNAKSLVASL-TPLQKEAEVPSY 319
++P+ L ++ Y
Sbjct: 257 SLRFDDKPDYSYLRQLFRNLFHRQGFSYDY 286
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.2 bits (241), Expect = 7e-23
Identities = 40/272 (14%), Positives = 89/272 (32%), Gaps = 39/272 (14%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERL 126
+V +A+K+ + Q L E + + R E ++ +
Sbjct: 23 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 82
Query: 127 LVAEFMPNETLSKHLFHW-ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRIL 185
+ ++ + L+ + Q + + + L Y S L+ DL +L
Sbjct: 83 MKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPSNLL 141
Query: 186 FDQDGNPRLSCFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVIPESV-VYSFGT 237
+ + ++ FGL + + ++ + PE + + +S+ ++S G
Sbjct: 142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201
Query: 238 LLLDLLSGKHI-------------------PPSHALDLIRGKNFLMLMDSC-------LE 271
+L ++LS + I P L+ I + S
Sbjct: 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 261
Query: 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
F N D ++ + L + L + P +R +
Sbjct: 262 RLFPNAD-SKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.5 bits (237), Expect = 2e-22
Identities = 44/270 (16%), Positives = 89/270 (32%), Gaps = 26/270 (9%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVG-LLRSERLVNLIGCC----CEG 122
V + A+K D + E + +V ++
Sbjct: 27 KVLQIFNKRTQEKFALKMLQ-----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 81
Query: 123 EERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTY 182
+ L+V E + L + +Q + + +A+ Y S A + D+
Sbjct: 82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA-HRDVKPE 140
Query: 183 RILFD---QDGNPRLSCFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVIPESVVYSFG 236
+L+ + +L+ FG K + S +T + PE L + ++S G
Sbjct: 141 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200
Query: 237 TLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT----ELVRLASRCLQY 292
++ LL G PP ++ + + + F N + + E+ L L+
Sbjct: 201 VIMYILLCGY--PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 258
Query: 293 EPRERPNAKSLVAS--LTPLQKEAEVPSYT 320
EP +R + + K + P +T
Sbjct: 259 EPTQRMTITEFMNHPWIMQSTKVPQTPLHT 288
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 94.2 bits (233), Expect = 3e-22
Identities = 44/276 (15%), Positives = 94/276 (34%), Gaps = 33/276 (11%)
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNL 115
+ + GE VVYK + A+K+ + + E + L+ +V L
Sbjct: 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 116 IGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRAL 175
+ +LV E + + L ++ L L + YC + L
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-VL 122
Query: 176 YHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNLAFTPPEYLRTGRVIPESV 231
+ DL +L +++G +++ FGL + L + P+ L + ++
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 232 -VYSFGTLLLDLLSGKHIPPS-----------------------HALDLIRGKNFLMLMD 267
++S G + ++++G + P + +L + + +
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
F + L S+ L+ +P +R AK
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.6 bits (229), Expect = 1e-21
Identities = 50/266 (18%), Positives = 93/266 (34%), Gaps = 33/266 (12%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEER 125
VVYK +A+K+ + + E + L +V L+ +
Sbjct: 17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 76
Query: 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRIL 185
LV EF+ ++ L K + + + L Q L +C S R L+ DL +L
Sbjct: 77 YLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLL 134
Query: 186 FDQDGNPRLSCFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVIPESVVYSFGTLLL 240
+ +G +L+ FGL + T+ T P L ++S G +
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 241 DLLSGKHI-PPSHALDLIR--GKNFLMLMDSCLEGHFSNDD------------------- 278
++++ + + P +D + + + G S D
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
Query: 279 -GTELVRLASRCLQYEPRERPNAKSL 303
+ L S+ L Y+P +R +AK+
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.2 bits (228), Expect = 2e-21
Identities = 49/281 (17%), Positives = 89/281 (31%), Gaps = 36/281 (12%)
Query: 58 IVSEHGEKAPNVVYKG--LVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSER-- 111
V+E GE A V+K L + R++A+KR + + E + L +
Sbjct: 11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 70
Query: 112 -LVNLIGCCCEGEERLLVAEFMPNETLS----KHLFHWENQPMKWAMRVRVALYLAQALD 166
+V L C + E + +L + + L + LD
Sbjct: 71 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 130
Query: 167 YCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN---LAFTPPEYLRT 223
+ S ++ DL IL G +L+ FGL + + ++ L + PE L
Sbjct: 131 FLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 189
Query: 224 GRVIPESVVYSFGTLLLDLLSGKHI---------------------PPSHALDLIRGKNF 262
++S G + ++ K + D+ +
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249
Query: 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
+ F D L +CL + P +R +A S
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.9 bits (230), Expect = 2e-21
Identities = 54/272 (19%), Positives = 84/272 (30%), Gaps = 43/272 (15%)
Query: 69 VVYKG-LVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER-- 125
VVY+ L D +A+K+ + D R E + + L +V L E+
Sbjct: 35 VVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 90
Query: 126 ----LLVAEFMPNETLSKHLFHWE-NQPMKWAMRVRVALYLAQALDYCSSKGRALYH-DL 179
LV +++P + Q + L ++L Y S G + H D+
Sbjct: 91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDI 148
Query: 180 NTYRILFDQDGNP-RLSCFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVIPESVVYS 234
+L D D +L FG K G+ + + P V+S
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 235 FGTLLLDLLSGKHI----PPSHALDLI-------------------RGKNFLMLMDSCLE 271
G +L +LL G+ I L I F +
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 268
Query: 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
F E + L SR L+Y P R
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 91.8 bits (227), Expect = 3e-21
Identities = 40/284 (14%), Positives = 79/284 (27%), Gaps = 32/284 (11%)
Query: 57 NIVSEH-------GEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR 108
N+V H GE + V+++G + ++ +A+K R + D+ Q +E R LL
Sbjct: 1 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA 58
Query: 109 SER-LVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDY 167
+ N+ EG +LV + + L + A + +
Sbjct: 59 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQS 116
Query: 168 CSSKGRALYHDLNTYRILFD-----QDGNPRLSCFGLMKNSRDGKSYSTN---------- 212
K +Y D+ L + FG++K RD +
Sbjct: 117 IHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175
Query: 213 -LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM--DSC 269
+ + + G + + L G + K + S
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235
Query: 270 LEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
E + P+ L + + +
Sbjct: 236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.6 bits (229), Expect = 3e-21
Identities = 37/267 (13%), Positives = 88/267 (32%), Gaps = 33/267 (12%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRS--AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER 125
V + +A+K+ R + +++ E R + +R E ++ L+ E
Sbjct: 33 AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL 92
Query: 126 LLVAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
+F +++ + + + + L Y + G + DL
Sbjct: 93 DDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII-HRDLKPGN 151
Query: 184 ILFDQDGNPRLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESV-VYSFGTLLLD 241
+ ++D ++ FGL + + Y + PE + ++V ++S G ++ +
Sbjct: 152 LAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 211
Query: 242 LLSGKHI-------------------PPSHALDLIRGKNFLMLMDSCLE------GHFSN 276
+++GK + PP+ + ++ M E
Sbjct: 212 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILT 271
Query: 277 DDGTELVRLASRCLQYEPRERPNAKSL 303
+ V L + L + +R A
Sbjct: 272 NASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.2 bits (223), Expect = 2e-20
Identities = 43/248 (17%), Positives = 80/248 (32%), Gaps = 21/248 (8%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDS---RQFLEEARAVGLLRSERLVNLIGCCCEGEE 124
V R+ A+K + + E+R + R L L +
Sbjct: 20 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
V E+ L HL + A + AL+Y S+ +Y D+ +
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSRDV-VYRDIKLENL 136
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLL 240
+ D+DG+ +++ FGL K + TP PE L + G ++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 241 DLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG--TELVRLASRCLQYEPRERP 298
+++ G+ ++ L + L E L + L+ +P++R
Sbjct: 197 EMMCGRLPFY--------NQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 248
Query: 299 NAKSLVAS 306
A
Sbjct: 249 GGGPSDAK 256
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.1 bits (217), Expect = 5e-20
Identities = 42/267 (15%), Positives = 80/267 (29%), Gaps = 35/267 (13%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEER 125
V+K + +A+KR + L E + L+ + +V L ++
Sbjct: 17 TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL 76
Query: 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRIL 185
LV EF + F N + + L + L +C S+ L+ DL +L
Sbjct: 77 TLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQNLL 133
Query: 186 FDQDGNPRLSCFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVIPESVVYSFGTLLL 240
+++G +L+ FGL + + T P ++S G +
Sbjct: 134 INRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 241 DLLSGKHIP------------------------PSHALDLIRGKNFLMLMDSCLEGHFSN 276
+L + L K + M + +
Sbjct: 194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP 253
Query: 277 DDGTELVRLASRCLQYEPRERPNAKSL 303
L L+ P +R +A+
Sbjct: 254 KLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 86.4 bits (213), Expect = 4e-19
Identities = 44/243 (18%), Positives = 81/243 (33%), Gaps = 14/243 (5%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQ---FLEEARAVGLLRSERLVNLIGCCCEGEE 124
V + A+K ++ +Q L E R + + LV L +
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
+V E++ + HL A + +Y S +Y DL +
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENL 172
Query: 185 LFDQDGNPRLSCFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
L DQ G +++ FG K + + PE + + ++ G L+ ++
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 244 SGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
+G PP A I+ ++ HFS+ +L L LQ + +R
Sbjct: 233 AGY--PPFFADQPIQIYEKIVSGKVRFPSHFSS----DLKDLLRNLLQVDLTKRFGNLKN 286
Query: 304 VAS 306
+
Sbjct: 287 GVN 289
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.2 bits (207), Expect = 1e-18
Identities = 49/292 (16%), Positives = 94/292 (32%), Gaps = 49/292 (16%)
Query: 58 IVSEHGEKAPNVVYKG-LVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVN 114
+++ G+ V+K + +A+K+ + L E + + LL+ E +VN
Sbjct: 14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 73
Query: 115 LIGCCCEGEER--------LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALD 166
LI C LV +F ++ L + RV L L
Sbjct: 74 LIEICRTKASPYNRCKGSIYLVFDFCEHDLA--GLLSNVLVKFTLSEIKRVMQMLLNGLY 131
Query: 167 YCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPP 218
Y L+ D+ +L +DG +L+ FGL + K+ N L + PP
Sbjct: 132 YIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 190
Query: 219 EYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277
E L R + ++ G ++ ++ + I + + E + D
Sbjct: 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 250
Query: 278 DGT--------------------------ELVRLASRCLQYEPRERPNAKSL 303
+ + L + L +P +R ++
Sbjct: 251 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.3 bits (192), Expect = 1e-16
Identities = 45/254 (17%), Positives = 80/254 (31%), Gaps = 21/254 (8%)
Query: 69 VVYKG----LVDEDRWIAVKRFNRSAWPDS----RQFLEEARAVGLLRSER-LVNLIGCC 119
V+ D + A+K ++ E + + +R LV L
Sbjct: 39 KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 98
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ L+ +++ L HL E + AL++ G +Y D+
Sbjct: 99 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQIY--VGEIVLALEHLHKLG-IIYRDI 155
Query: 180 NTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVI-------PESVV 232
IL D +G+ L+ FGL K ++ EY+ V
Sbjct: 156 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDW 215
Query: 233 YSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQY 292
+S G L+ +LL+G P + + E + + L R L
Sbjct: 216 WSLGVLMYELLTGA--SPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMK 273
Query: 293 EPRERPNAKSLVAS 306
+P++R A
Sbjct: 274 DPKKRLGCGPRDAD 287
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.7 bits (185), Expect = 2e-15
Identities = 43/278 (15%), Positives = 93/278 (33%), Gaps = 33/278 (11%)
Query: 58 IVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRS--AWPDSRQFLEEARAVGLLRSERLVN 114
+S G A V +AVK+ +R + +++ E R + ++ E ++
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 115 LIGCCCEGEERLLVAEFMPNETLSKHLFH--WENQPMKWAMRVRVALYLAQALDYCSSKG 172
L+ + L + + Q + + + + L Y S
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 173 RALYHDLNTYRILFDQDGNPRLSCFGL-MKNSRDGKSYSTNLAFTPPEYLRTGRVIPESV 231
+ DL + ++D ++ FGL + Y + PE + ++V
Sbjct: 142 II-HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 232 -VYSFGTLLLDLLSGKH-------------------IPPSHALDLIR---GKNFLMLMDS 268
++S G ++ +LL+G+ P + L I +N++ +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 260
Query: 269 CLEGHFSN---DDGTELVRLASRCLQYEPRERPNAKSL 303
+ +F+N V L + L + +R A
Sbjct: 261 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 71.8 bits (175), Expect = 2e-14
Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 50/276 (18%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGEERL 126
V++ + + + + VK ++ E + + LR ++ L + R
Sbjct: 50 EVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106
Query: 127 --LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
LV E + N + Q + + +ALDYC S G + D+ + +
Sbjct: 107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIM-HRDVKPHNV 160
Query: 185 LFDQDGNP-RLSCFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVIPESV-VYSFGTLL 239
+ D + RL +GL + G+ Y+ F PE L ++ S+ ++S G +L
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
Query: 240 LDLLSGKH--------------------------------IPPSHALDLIRGKNFLMLMD 267
++ K I + I G++ +
Sbjct: 221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
+ + E + + L+Y+ + R A+
Sbjct: 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.4 bits (171), Expect = 9e-14
Identities = 37/299 (12%), Positives = 87/299 (29%), Gaps = 65/299 (21%)
Query: 69 VVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
V+ + + +A+K + +E + + + +LL
Sbjct: 28 TVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86
Query: 128 VAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGR 173
+ +E ++ + +++ L LDY +
Sbjct: 87 DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 146
Query: 174 ALYHDLNTYRILFDQDGNP------RLSCFGLMKNSRDGKSYS-TNLAFTPPEYLRTGRV 226
++ D+ +L + +P +++ G + + S + PE L
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206
Query: 227 IPESVVYSFGTLLLDLLSGKHI-PPSHALDLIRGKNFLMLMDSCL--------------- 270
+ ++S L+ +L++G + P + + + + L
Sbjct: 207 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR 266
Query: 271 --------------------------EGHFSNDDGTELVRLASRCLQYEPRERPNAKSL 303
+ FS D+ E+ S LQ +PR+R +A L
Sbjct: 267 TFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.7 bits (159), Expect = 3e-12
Identities = 36/294 (12%), Positives = 89/294 (30%), Gaps = 54/294 (18%)
Query: 58 IVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSA--WPDSRQFLEEARAVGLLRSERLVN 114
+ G A +V DR +A+K+ +R +++ E + + + +++
Sbjct: 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 115 LIGCCC------EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYC 168
L+ E ++ LV E M + + + + +
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLCGIKHL 135
Query: 169 SSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN---LAFTPPEYLRTGR 225
S G ++ DL I+ D ++ FGL + + + + PE +
Sbjct: 136 HSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 226 VIPESVVYSFGTLLLDLLSGKHI----PPSHALDLI------RGKNFLMLMDSCLEGHFS 275
++S G ++ +++ K + + + F+ + + +
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 276 N--------------------------DDGTELVRLASRCLQYEPRERPNAKSL 303
N ++ L S+ L +P +R +
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.3 bits (106), Expect = 4e-06
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Query: 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQV 446
K++G+ F + +P A CY I + + R LCYL P++AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 447 ISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHRN 488
+ A + + ++A L+ +L ++ N
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 42.5 bits (99), Expect = 4e-05
Identities = 17/143 (11%), Positives = 35/143 (24%), Gaps = 17/143 (11%)
Query: 69 VVYKGLVDEDRWIAVKRFNRSA----------WPDSRQFLEEARAVGLLRSERLVNLIGC 118
V+ ++ VK F A L L G
Sbjct: 15 AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74
Query: 119 CCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHD 178
+ N L + + E ++ V + + + + ++ D
Sbjct: 75 AVPKVY-----AWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHR-GIVHGD 128
Query: 179 LNTYRILFDQDGNPRLSCFGLMK 201
L+ Y +L + + F
Sbjct: 129 LSQYNVLVS-EEGIWIIDFPQSV 150
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 128 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (88), Expect = 4e-04
Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Query: 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGD 440
++ L K+ G+ A++ KDF TA++ Y + + T + Y +
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCREL 60
Query: 441 AMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKD 477
+A + + + A A +G + +E KD
Sbjct: 61 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 168 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Score = 36.5 bits (83), Expect = 0.003
Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 20/137 (14%)
Query: 372 SFQMWTDQIQETLNS-KKRGDAAFRAKDFPTAIECYTHFI--------------DGGTMV 416
S++M T + E K++G F+ + A+ Y +
Sbjct: 3 SWEMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESF 62
Query: 417 SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 476
F +CYL +A+ +A + Y + A + A+ +
Sbjct: 63 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFE 122
Query: 477 -----DGTNLEAKKHRN 488
+ N A+
Sbjct: 123 KVLEVNPQNKAARLQIF 139
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.8 bits (81), Expect = 0.004
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 20/135 (14%)
Query: 372 SFQMWTDQ-IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS------------- 417
S++M +++ ++++ K+RG F+ + A+ Y + S
Sbjct: 1 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 60
Query: 418 -PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLK 476
+C+L A+ +A + + + A + A+ +
Sbjct: 61 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 120
Query: 477 -----DGTNLEAKKH 486
N AK
Sbjct: 121 KVLQLYPNNKAAKTQ 135
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 488 | |||
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.92 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.83 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.81 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.8 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.77 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.76 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.74 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.72 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.7 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.67 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.67 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.65 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.62 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.59 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.58 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.54 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.54 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.5 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.49 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.45 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.45 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.4 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.36 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.31 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.31 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.3 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.27 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.26 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.25 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.22 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.21 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.09 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.08 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.08 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.08 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.05 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.05 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.92 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.89 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.85 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.84 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.81 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.78 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.69 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.66 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.6 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.48 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.43 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.42 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.31 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.3 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.22 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.15 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.13 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.13 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 98.02 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.9 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.74 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.69 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.63 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 97.14 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.11 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.1 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 88.14 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 87.35 | |
| d1wr0a1 | 77 | Vacuolar sorting protein 4b (VPS4B, SKD1 protein) | 85.02 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 82.94 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-57 Score=426.86 Aligned_cols=253 Identities=22% Similarity=0.309 Sum_probs=207.5
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++.++++||+|+||.||+|.+.+++.||||+++... ...++|.+|++++++++|||||+++|+|..++..++||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 4668899999999999999998888899999998654 456789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-----S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 208 (488)
+|+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++...... .
T Consensus 84 ~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~ 161 (263)
T d1sm2a_ 84 HGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161 (263)
T ss_dssp TCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred CCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence 9999998864 4466999999999999999999999999 9999999999999999999999999998654332 3
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..||+.|+|||++.+..++.++|||||||++|||+|++.|+...... ..+...+....+...+..+++++.+|+.+
T Consensus 162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~----~~~~~~i~~~~~~~~p~~~~~~l~~li~~ 237 (263)
T d1sm2a_ 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLASTHVYQIMNH 237 (263)
T ss_dssp ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH----HHHHHHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH----HHHHHHHHhcCCCCCccccCHHHHHHHHH
Confidence 46789999999999999999999999999999999965555432111 11111122223334455667899999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhcc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
||+.||++|||+++|+++|+++...
T Consensus 238 cl~~~p~~Rps~~~il~~L~~i~es 262 (263)
T d1sm2a_ 238 CWKERPEDRPAFSRLLRQLAEIAES 262 (263)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HccCCHhHCcCHHHHHHHHHHHHhC
Confidence 9999999999999999999988653
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.1e-57 Score=428.88 Aligned_cols=254 Identities=20% Similarity=0.298 Sum_probs=217.8
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+++.+.++||+|+||+||+|.+. +++.||||+++.+. ...++|.+|+.+|++++|||||+++++|.+++..++||||+
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~ 95 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 95 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecc
Confidence 45678899999999999999964 58899999998654 45678999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-----
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK----- 207 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 207 (488)
++|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 96 ~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~ 174 (287)
T d1opja_ 96 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 174 (287)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEET
T ss_pred cCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCceeec
Confidence 9999999997666678999999999999999999999999 9999999999999999999999999998765432
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
...||+.|+|||++.+..++.++|||||||++|||+||+.|+...... ......+....+...+..+++++.+|+.
T Consensus 175 ~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~l~~li~ 250 (287)
T d1opja_ 175 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVYELLEKDYRMERPEGCPEKVYELMR 250 (287)
T ss_dssp TEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred cccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH----HHHHHHHhcCCCCCCCccchHHHHHHHH
Confidence 234688999999999999999999999999999999987766433111 1112222333344556677889999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 288 RCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+||+.||++|||+.+|++.|+.+...
T Consensus 251 ~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 251 ACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred HHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999887654
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-57 Score=422.82 Aligned_cols=256 Identities=21% Similarity=0.236 Sum_probs=205.4
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
++.+.+++.||+|+||+||+|+++. .||||+++.... ...+.|.+|+.+|++++|||||++++++. .+..++|||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEe
Confidence 4567888999999999999998633 599999975532 33568999999999999999999999875 456899999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|++||+|.+++.. ....+++..+..|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 84 y~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 84 WCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp CCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred cCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 9999999999964 3456999999999999999999999999 999999999999999999999999999865432
Q ss_pred --CccccccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 207 --KSYSTNLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
....||+.|||||++.+ ..++.++|||||||++|||+||+.||.+.............-.........+..++++
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 241 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHH
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHH
Confidence 24578999999999965 3578999999999999999999999865321111100010000011111234456789
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+|+.+||+.||.+|||+.+|+++|+.+.+.
T Consensus 242 l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 242 MKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999988764
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.1e-57 Score=430.68 Aligned_cols=268 Identities=20% Similarity=0.292 Sum_probs=213.1
Q ss_pred cccCHHHHHHHhcCCC------cccccccCCCCCCceEEEEEeC-CC---cEEEEEEccCCCCC-ChHHHHHHHHHHhhc
Q 011349 39 REFNLDQLRAATSGFC------ADNIVSEHGEKAPNVVYKGLVD-ED---RWIAVKRFNRSAWP-DSRQFLEEARAVGLL 107 (488)
Q Consensus 39 ~~~~~~~~~~~~~~~~------~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~-~~~~~~~E~~~l~~l 107 (488)
..|+++++..++.+|+ .+++.+.||+|+||+||+|.+. ++ ..||||++...... ..+.|.+|+++|+++
T Consensus 5 d~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l 84 (299)
T d1jpaa_ 5 DPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF 84 (299)
T ss_dssp CGGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC
Confidence 3467777777777664 3456788999999999999964 33 35899998765432 245799999999999
Q ss_pred CCCCCcccccceecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec
Q 011349 108 RSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187 (488)
Q Consensus 108 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~ 187 (488)
+|||||+++|++.+++..++|||||+||+|.+++.. ..+.+++.+++.|+.||+.||.|||+++ |+||||||+|||++
T Consensus 85 ~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~ 162 (299)
T d1jpaa_ 85 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVN 162 (299)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEC
T ss_pred CCCCCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEEC
Confidence 999999999999999999999999999999998864 4457999999999999999999999999 99999999999999
Q ss_pred CCCCCeeccCCCcccCCCCC---------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhh
Q 011349 188 QDGNPRLSCFGLMKNSRDGK---------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLI 257 (488)
Q Consensus 188 ~~~~~kl~Dfgla~~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~ 257 (488)
.++++||+|||+++...... ...+|+.|||||.+.++.++.++|||||||++|||+| |+.||........
T Consensus 163 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~ 242 (299)
T d1jpaa_ 163 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 242 (299)
T ss_dssp TTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999998654321 2346889999999999999999999999999999998 7877765432211
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
...+....+.+.+..++.++.+|+.+||+.||++|||+.+|++.|+++.+.
T Consensus 243 -----~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~ 293 (299)
T d1jpaa_ 243 -----INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293 (299)
T ss_dssp -----HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -----HHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence 111222233445666788999999999999999999999999999987654
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-57 Score=424.91 Aligned_cols=252 Identities=21% Similarity=0.308 Sum_probs=212.3
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+.++++++||+|+||.||+|.+++++.||||+++... ...+.|.+|+.+|++++|||||++++++. .+..++||||++
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~ 90 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME 90 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCC
Confidence 4567889999999999999999888899999997654 45678999999999999999999999875 466899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KS 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 208 (488)
+|+|.+++.......+++..++.|+.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++..... ..
T Consensus 91 ~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~ 169 (272)
T d1qpca_ 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (272)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCccccccc
Confidence 999999886544456999999999999999999999999 999999999999999999999999999876543 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..||+.|||||++.++.++.++|||||||++|||+||+.|+....... .....+....+...+..+++++.+|+.+
T Consensus 170 ~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~----~~~~~i~~~~~~~~p~~~~~~l~~li~~ 245 (272)
T d1qpca_ 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYRMVRPDNCPEELYQLMRL 245 (272)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH----HHHHHHHhcCCCCCcccChHHHHHHHHH
Confidence 467899999999998999999999999999999999776654331111 1111122223334556678899999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
||+.||++|||+++|++.|+.+..
T Consensus 246 cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 246 CWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCCHhHCcCHHHHHHHhhhhhh
Confidence 999999999999999999987654
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-56 Score=423.69 Aligned_cols=245 Identities=18% Similarity=0.251 Sum_probs=210.5
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.++++||+|+||+||+|. ..+|+.||||+++.......+.+.+|+.+|++++|||||++++++.+++..|+|||||+
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~ 100 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence 57899999999999999999 46799999999987665667789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----Ccc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSY 209 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 209 (488)
||+|.+++.+ ..+++.++..++.||+.||.|||++| |+||||||+|||++.++++||+|||+++..... ...
T Consensus 101 gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 176 (293)
T d1yhwa1 101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (293)
T ss_dssp TCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred CCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeecccccccccc
Confidence 9999998853 46999999999999999999999999 999999999999999999999999999876432 345
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHh
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRC 289 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 289 (488)
.||+.|+|||++.+..++.++|||||||++|||+||+.||.+............ ........+...++++.+|+.+|
T Consensus 177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~li~~~ 253 (293)
T d1yhwa1 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFLNRC 253 (293)
T ss_dssp CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---HCSCCCSSGGGSCHHHHHHHHHH
T ss_pred ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHh---CCCCCCCCcccCCHHHHHHHHHH
Confidence 789999999999999999999999999999999999999865432211111000 11111233455678999999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 011349 290 LQYEPRERPNAKSLVAS 306 (488)
Q Consensus 290 l~~dp~~Rps~~~il~~ 306 (488)
|+.||.+|||+.++++|
T Consensus 254 L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 254 LDMDVEKRGSAKELLQH 270 (293)
T ss_dssp TCSSTTTSCCHHHHTTC
T ss_pred ccCChhHCcCHHHHhcC
Confidence 99999999999999886
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-56 Score=417.85 Aligned_cols=243 Identities=20% Similarity=0.267 Sum_probs=209.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+|.+++.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.++++++|||||++++++.+++..++|||
T Consensus 7 dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmE 86 (263)
T d2j4za1 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE 86 (263)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEe
Confidence 578899999999999999995 568999999986432 2345678999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--Cc
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KS 208 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 208 (488)
||+||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 87 y~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 163 (263)
T d2j4za1 87 YAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 163 (263)
T ss_dssp CCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEE
T ss_pred ecCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCcccc
Confidence 999999999997 3456999999999999999999999999 999999999999999999999999999876544 34
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..||+.|||||++.+..++.++|||||||++|||+||+.||........... +.. ....++...++++.+|+.+
T Consensus 164 ~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~----i~~--~~~~~p~~~s~~~~~li~~ 237 (263)
T d2j4za1 164 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR----ISR--VEFTFPDFVTEGARDLISR 237 (263)
T ss_dssp TTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHT--TCCCCCTTSCHHHHHHHHH
T ss_pred cCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHH----HHc--CCCCCCccCCHHHHHHHHH
Confidence 5789999999999999999999999999999999999999876433221111 111 1123455667899999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||+.||++|||++++++|
T Consensus 238 ~L~~dp~~R~t~~eil~h 255 (263)
T d2j4za1 238 LLKHNPSQRPMLREVLEH 255 (263)
T ss_dssp HTCSSGGGSCCHHHHHTC
T ss_pred HccCCHhHCcCHHHHHcC
Confidence 999999999999999986
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-56 Score=419.39 Aligned_cols=246 Identities=19% Similarity=0.151 Sum_probs=203.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
+|.+++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+.+|++++|||||++++++.+++..|+||||+
T Consensus 6 dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 85 (271)
T d1nvra_ 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 85 (271)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEecc
Confidence 568899999999999999995 56999999999765432 3457999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC------C
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD------G 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~ 206 (488)
+||+|.+++. ....+++.++..++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+|+.... .
T Consensus 86 ~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~ 162 (271)
T d1nvra_ 86 SGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 162 (271)
T ss_dssp TTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred CCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCccccc
Confidence 9999999996 4567999999999999999999999999 99999999999999999999999999986532 2
Q ss_pred CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|||||++.+..+ +.++|||||||++|||+||+.||.......... ................++++.+|
T Consensus 163 ~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~s~~~~~l 239 (271)
T d1nvra_ 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY---SDWKEKKTYLNPWKKIDSAPLAL 239 (271)
T ss_dssp CCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH---HHHHTTCTTSTTGGGSCHHHHHH
T ss_pred cceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH---HHHhcCCCCCCccccCCHHHHHH
Confidence 34579999999999988776 678999999999999999999886542211110 01111111112223456889999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||++|||++++++|
T Consensus 240 i~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 240 LHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp HHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHcCCChhHCcCHHHHhcC
Confidence 999999999999999999876
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-55 Score=410.70 Aligned_cols=249 Identities=22% Similarity=0.305 Sum_probs=213.6
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++.++++||+|+||+||+|++++++.||||+++... ...++|.+|+.++++++|||||+++|+|.+++.+++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 4557899999999999999999888899999998765 356789999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KS 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 208 (488)
+|+|..++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++..... ..
T Consensus 83 ~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (258)
T d1k2pa_ 83 NGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160 (258)
T ss_dssp TEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC
T ss_pred CCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCceeecc
Confidence 9999998754 3456899999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
..+|+.|+|||.+.+..++.++|||||||++|||+| |+.||......... ..+....+...|...++++.+|+.
T Consensus 161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~-----~~i~~~~~~~~p~~~~~~l~~li~ 235 (258)
T d1k2pa_ 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----EHIAQGLRLYRPHLASEKVYTIMY 235 (258)
T ss_dssp SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH-----HHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHH-----HHHHhCCCCCCcccccHHHHHHHH
Confidence 567899999999999999999999999999999998 77777654332221 112222334455667789999999
Q ss_pred HhccCCCCCCCCHHHHHHHhchh
Q 011349 288 RCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
+||+.||++|||+++++++|..|
T Consensus 236 ~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 236 SCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHCC
T ss_pred HHccCCHhHCcCHHHHHHHhhCC
Confidence 99999999999999999998653
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-56 Score=419.98 Aligned_cols=245 Identities=17% Similarity=0.210 Sum_probs=207.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
|++++.||+|+||+||+|.. .+|+.||||+++.......+.+.+|+++|++++|||||++++++.+++..++|||||+|
T Consensus 14 Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~ 93 (288)
T d2jfla1 14 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCC
Confidence 68899999999999999995 56899999999877656677899999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC----CCccc
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD----GKSYS 210 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~ 210 (488)
|+|.+++.+ ...++++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....
T Consensus 94 g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~ 171 (288)
T d2jfla1 94 GAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 171 (288)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCC
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCcccccccc
Confidence 999998764 3456999999999999999999999999 99999999999999999999999999975532 23567
Q ss_pred cccCCCCccccc-----cCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcccccccccc-ccCCCCChhhHHHHHH
Q 011349 211 TNLAFTPPEYLR-----TGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS-CLEGHFSNDDGTELVR 284 (488)
Q Consensus 211 ~t~~y~aPE~~~-----~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 284 (488)
||+.|||||++. +..++.++|||||||++|||+||+.||.+....... ..+... ......+...++++.+
T Consensus 172 Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~s~~~~~ 247 (288)
T d2jfla1 172 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL----LKIAKSEPPTLAQPSRWSSNFKD 247 (288)
T ss_dssp SCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH----HHHHHSCCCCCSSGGGSCHHHHH
T ss_pred cccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHH----HHHHcCCCCCCCccccCCHHHHH
Confidence 899999999984 456889999999999999999999988654221111 111111 1112234566789999
Q ss_pred HHHHhccCCCCCCCCHHHHHHH
Q 011349 285 LASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~~il~~ 306 (488)
|+.+||+.||.+|||+.++++|
T Consensus 248 li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 248 FLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999876
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.6e-56 Score=422.98 Aligned_cols=244 Identities=19% Similarity=0.228 Sum_probs=207.7
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 56 DNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
|.++++||+|+||+||+|+ ..+|+.||||+++...... .+.+.+|+.+|++++|||||++++++.+++..|+||||
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 96 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence 5788999999999999999 4578999999998665333 34688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCCcccc
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST 211 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 211 (488)
|+||+|..++. .+.++++.++..++.||+.||.|||+++ ||||||||+|||++.++++||+|||+++.........|
T Consensus 97 ~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 97 CLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp CSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred cCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence 99999976665 4567999999999999999999999999 99999999999999999999999999998888788899
Q ss_pred ccCCCCcccccc---CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 212 NLAFTPPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 212 t~~y~aPE~~~~---~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
|+.|||||++.+ +.++.++|||||||++|||++|..||.+...... +..+.........+...++++.+|+.+
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~s~~~~~li~~ 249 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPALQSGHWSEYFRNFVDS 249 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCCCSCTTSCHHHHHHHHH
T ss_pred CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhCCCCCCCCCCCCHHHHHHHHH
Confidence 999999999864 4589999999999999999999998865422211 111111111122233457889999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||+.||.+|||+.++++|
T Consensus 250 ~L~~dP~~Rpt~~ell~H 267 (309)
T d1u5ra_ 250 CLQKIPQDRPTSEVLLKH 267 (309)
T ss_dssp HTCSSGGGSCCHHHHTTC
T ss_pred HCcCChhHCcCHHHHHhC
Confidence 999999999999999886
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-56 Score=416.29 Aligned_cols=248 Identities=17% Similarity=0.233 Sum_probs=198.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceec--CCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCE--GEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv 128 (488)
++|.+++.||+|+||.||+|+. .+|+.||||+++...... .+.+.+|+++|++++|||||++++++.+ ++.+|+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 4578999999999999999994 579999999998765332 3468999999999999999999999865 4568999
Q ss_pred EecCCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC----CcccccccCCceeecCCCCCeeccCCCccc
Q 011349 129 AEFMPNETLSKHLFHW--ENQPMKWAMRVRVALYLAQALDYCSSKG----RALYHDLNTYRILFDQDGNPRLSCFGLMKN 202 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~----~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 202 (488)
||||+||+|.+++... .+..+++..++.++.||+.||.|||+.+ +||||||||+|||++.++.+||+|||+++.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 9999999999998632 3567999999999999999999999864 499999999999999999999999999987
Q ss_pred CCCC----CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 203 SRDG----KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 203 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
.... ....||+.|||||++.+..++.++|||||||++|||+||+.||........... +........+...
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~-----i~~~~~~~~~~~~ 238 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK-----IREGKFRRIPYRY 238 (269)
T ss_dssp C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-----HHHTCCCCCCTTS
T ss_pred cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHH-----HHcCCCCCCCccc
Confidence 6443 346789999999999999999999999999999999999999876433222111 1111112344566
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
++++.+|+.+||+.||.+|||+.++++|
T Consensus 239 s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 239 SDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 7899999999999999999999999876
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-55 Score=413.33 Aligned_cols=254 Identities=23% Similarity=0.308 Sum_probs=210.7
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
+++++.+.||+|+||.||+|.+.+++.||||+++... ...+.|.+|+.+|++++|||||++++++. .+..++||||++
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~ 94 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 94 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecC
Confidence 4578899999999999999998888889999997654 45678999999999999999999999985 456899999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-----Cc
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-----KS 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 208 (488)
+|+|..++.......+++.+++.++.||+.||.|||+++ |+||||||+|||+++++++||+|||+++..... ..
T Consensus 95 ~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 173 (285)
T d1fmka3 95 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 173 (285)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCceeecc
Confidence 999999887545567999999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..||+.|+|||++.++.++.++|||||||++|||+||+.|+....... .....+......+.+..+++++.+++.+
T Consensus 174 ~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~l~~li~~ 249 (285)
T d1fmka3 174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPECPESLHDLMCQ 249 (285)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHHHHTTCCCCCCTTSCHHHHHHHHH
T ss_pred ccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH----HHHHHHHhcCCCCCCcccCHHHHHHHHH
Confidence 467899999999999999999999999999999999877665432111 1111122223344566778899999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhccc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
||+.||++|||+++|++.|+.+....
T Consensus 250 cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 250 CWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 99999999999999999988876543
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-55 Score=412.36 Aligned_cols=253 Identities=20% Similarity=0.281 Sum_probs=206.4
Q ss_pred cccccccCCCCCCceEEEEEeCCC-----cEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVDED-----RWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~~~-----~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+.+.+.||+|+||.||+|.++.. ..||||+++...... ...|.+|+.+|++++|||||+++|++.+.+..++|
T Consensus 8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v 87 (283)
T d1mqba_ 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 87 (283)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence 445667789999999999996432 469999997654332 34689999999999999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK- 207 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 207 (488)
|||+.+++|.+.+.. ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 88 ~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~ 165 (283)
T d1mqba_ 88 TEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 165 (283)
T ss_dssp EECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence 999999999988764 4467999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHH
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTE 281 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (488)
...||+.|||||++.++.++.++|||||||++|||+||+.|+...... ..+...+....+.+.+..++.+
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~ 241 (283)
T d1mqba_ 166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMKAINDGFRLPTPMDCPSA 241 (283)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHHTTCCCCCCTTCBHH
T ss_pred cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH----HHHHHHHhccCCCCCchhhHHH
Confidence 235788999999999999999999999999999999977666543211 1112223333444566677889
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 282 LVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 282 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 242 l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 242 IYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999988764
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=9.4e-55 Score=415.32 Aligned_cols=246 Identities=15% Similarity=0.176 Sum_probs=193.5
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
|.+++.||+|+||+||+|.. .+|+.||||++...... ....+.+|+.+|++++|||||++++++.+++..|+|||||+
T Consensus 11 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~ 90 (307)
T d1a06a_ 11 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 90 (307)
T ss_dssp EEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred eEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 68889999999999999995 46899999999765432 24568899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec---CCCCCeeccCCCcccCCCC---C
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDG---K 207 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~---~ 207 (488)
||+|.+++. ..+.+++.++..++.||+.||.|||+++ |+||||||+|||+. +++.+||+|||+++..... .
T Consensus 91 gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~ 167 (307)
T d1a06a_ 91 GGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 167 (307)
T ss_dssp SCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred CCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCCeee
Confidence 999999997 4567999999999999999999999999 99999999999994 5789999999999876543 3
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLAS 287 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (488)
+..||+.|||||++.+..++.++|||||||++|||+||+.||.+............. ............++++.+|+.
T Consensus 168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li~ 245 (307)
T d1a06a_ 168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA--EYEFDSPYWDDISDSAKDFIR 245 (307)
T ss_dssp -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTT--CCCCCTTTTTTSCHHHHHHHH
T ss_pred eeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhcc--CCCCCCccccCCCHHHHHHHH
Confidence 457999999999999999999999999999999999999998765332221111111 011122233456788999999
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 011349 288 RCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 288 ~cl~~dp~~Rps~~~il~~ 306 (488)
+||+.||++|||+.++++|
T Consensus 246 ~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 246 HLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp HHSCSSGGGSCCHHHHHHS
T ss_pred HHccCCHhHCcCHHHHhcC
Confidence 9999999999999999987
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-55 Score=422.98 Aligned_cols=249 Identities=20% Similarity=0.263 Sum_probs=203.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.++++||+|+||+||+|.. .+|+.||||+++...... ...+.+|+.+|++++|||||+++++|.+++..++||||+
T Consensus 7 ~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~ 86 (322)
T d1s9ja_ 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86 (322)
T ss_dssp GEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 467889999999999999995 578999999998654333 467999999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCceeecCCCCCeeccCCCcccCCC--CCcc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSY 209 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~~ 209 (488)
+||+|.+++.+ .+.+++..+..++.||+.||.|||++ + |+||||||+|||++.++++||+|||+|+.... ..+.
T Consensus 87 ~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 163 (322)
T d1s9ja_ 87 DGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163 (322)
T ss_dssp TTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---
T ss_pred CCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCccccc
Confidence 99999999973 45699999999999999999999975 7 99999999999999999999999999986532 3467
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc---cc------------------------
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK---NF------------------------ 262 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~---~~------------------------ 262 (488)
.||+.|+|||++.+..++.++|||||||++|||+||+.||........... ..
T Consensus 164 ~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T d1s9ja_ 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMD 243 (322)
T ss_dssp CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------------
T ss_pred cCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccc
Confidence 899999999999999999999999999999999999999865422110000 00
Q ss_pred -------cccccc---ccCCCCC-hhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 263 -------LMLMDS---CLEGHFS-NDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 263 -------~~~~~~---~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... ...+..+ ...+.++.+|+.+||..||.+|||++++++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 244 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp --CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 000000 0001111 1245789999999999999999999999997
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-55 Score=411.16 Aligned_cols=244 Identities=20% Similarity=0.274 Sum_probs=204.6
Q ss_pred cCCCCCCceEEEEEeC---CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCCCC
Q 011349 61 EHGEKAPNVVYKGLVD---EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136 (488)
Q Consensus 61 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 136 (488)
+||+|+||+||+|.+. ++..||||+++..... ..+.|.+|+++|++++|||||++++++.. +..++||||++||+
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~ 94 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 94 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence 4899999999999853 3557999999765422 34679999999999999999999999864 56899999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-------cc
Q 011349 137 LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-------SY 209 (488)
Q Consensus 137 L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~~ 209 (488)
|.+++.. .+..+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 95 L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~ 172 (285)
T d1u59a_ 95 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 172 (285)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSS
T ss_pred HHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhccccccccccccccc
Confidence 9998754 3467999999999999999999999999 9999999999999999999999999998664322 34
Q ss_pred ccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 210 ~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
.||+.|+|||++.++.++.++|||||||++|||+| |+.||....... +...+....+...+..+++++.+|+.+
T Consensus 173 ~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~-----~~~~i~~~~~~~~p~~~~~~l~~li~~ 247 (285)
T d1u59a_ 173 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----VMAFIEQGKRMECPPECPPELYALMSD 247 (285)
T ss_dssp CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH-----HHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred ccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence 57899999999999999999999999999999998 888876542221 112222233445666788999999999
Q ss_pred hccCCCCCCCCHHHHHHHhchhhc
Q 011349 289 CLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
||+.||++|||+.+|++.|+....
T Consensus 248 cl~~~p~~RPs~~~i~~~L~~~~~ 271 (285)
T d1u59a_ 248 CWIYKWEDRPDFLTVEQRMRACYY 271 (285)
T ss_dssp TTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCCHhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999876543
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-54 Score=409.12 Aligned_cols=242 Identities=22% Similarity=0.272 Sum_probs=200.3
Q ss_pred ccCCCCCCceEEEEEeCC---CcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCCC
Q 011349 60 SEHGEKAPNVVYKGLVDE---DRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPN 134 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 134 (488)
++||+|+||.||+|.+.. ++.||||+++..... ..+.|.+|+.+|++++|||||+++++|.. +..+|||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 358999999999998543 567999999754322 24579999999999999999999999854 567899999999
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC-------
Q 011349 135 ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------- 207 (488)
Q Consensus 135 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------- 207 (488)
|+|.+++. ....+++.+++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++......
T Consensus 92 g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 168 (277)
T d1xbba_ 92 GPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168 (277)
T ss_dssp EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence 99999987 4567999999999999999999999999 9999999999999999999999999998654332
Q ss_pred ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...||+.|||||.+.+..++.++|||||||++|||+| |+.||.+..... +...+....+...+..+++++.+|+
T Consensus 169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~-----~~~~i~~~~~~~~p~~~~~~~~~li 243 (277)
T d1xbba_ 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----VTAMLEKGERMGCPAGCPREMYDLM 243 (277)
T ss_dssp --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCcccCHHHHHHH
Confidence 3457899999999999999999999999999999998 788876542221 1122222233455667789999999
Q ss_pred HHhccCCCCCCCCHHHHHHHhchh
Q 011349 287 SRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
.+||+.||++|||+.+|++.|+.+
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhCH
Confidence 999999999999999999888764
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-54 Score=418.00 Aligned_cols=250 Identities=21% Similarity=0.285 Sum_probs=206.6
Q ss_pred CcccccccCCCCCCceEEEEEeCC-C-----cEEEEEEccCCC-CCChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE-D-----RWIAVKRFNRSA-WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
+++.+++.||+|+||+||+|++.. + ..||||++.... ......+.+|+.+|.++ +|||||++++++.+.+..
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 456788999999999999998532 2 269999987543 23456799999999999 899999999999999999
Q ss_pred eEEEecCCCCChhhhhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCce
Q 011349 126 LLVAEFMPNETLSKHLFHWE---------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Ni 184 (488)
++|||||+||+|.++|.... ...+++..++.|+.||+.||.|||+++ ||||||||+||
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~Ni 195 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNV 195 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGE
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhcc
Confidence 99999999999999996432 135899999999999999999999999 99999999999
Q ss_pred eecCCCCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhh
Q 011349 185 LFDQDGNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLI 257 (488)
Q Consensus 185 ll~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~ 257 (488)
|++.++++||+|||+|+...... ...||+.|||||++.++.++.++|||||||++|||+| |..||.+....
T Consensus 196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~-- 273 (325)
T d1rjba_ 196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD-- 273 (325)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--
T ss_pred ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH--
Confidence 99999999999999998654332 3456899999999999999999999999999999998 78887653221
Q ss_pred hccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhc
Q 011349 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308 (488)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 308 (488)
..+..++....+...+..+++++.+||.+||+.||++|||+++|+++|.
T Consensus 274 --~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 274 --ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp --HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --HHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 1122223333344556677889999999999999999999999999985
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-55 Score=413.26 Aligned_cols=244 Identities=18% Similarity=0.163 Sum_probs=207.1
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
++|.+++.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 4578999999999999999995 579999999986432 234567999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
||++||+|.+++. ..+.+++..+..++.||+.||.|||+.+ ||||||||+|||+++++.+||+|||+++.....
T Consensus 88 Ey~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~ 164 (288)
T d1uu3a_ 88 SYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164 (288)
T ss_dssp CCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EccCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence 9999999999887 4467999999999999999999999999 999999999999999999999999999876432
Q ss_pred ---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....||+.|||||++.+..++.++|||||||++|||+||..||........... +... ...++...++++.
T Consensus 165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~ 238 (288)
T d1uu3a_ 165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK----IIKL--EYDFPEKFFPKAR 238 (288)
T ss_dssp -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHTT--CCCCCTTCCHHHH
T ss_pred cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHH----HHcC--CCCCCccCCHHHH
Confidence 245799999999999999999999999999999999999999876432221111 1111 1234556678899
Q ss_pred HHHHHhccCCCCCCCCHHHHHHH
Q 011349 284 RLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+||.+||+.||.+|||++|++.+
T Consensus 239 ~li~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 239 DLVEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp HHHHTTSCSSGGGSTTSGGGTCH
T ss_pred HHHHHHccCCHhHCcCHHHHcCC
Confidence 99999999999999999997654
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-54 Score=405.37 Aligned_cols=244 Identities=19% Similarity=0.238 Sum_probs=198.2
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceec----CCeeeEEE
Q 011349 57 NIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCE----GEERLLVA 129 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 129 (488)
++.++||+|+||+||+|.. .+++.||||++...... ..+.|.+|+++|++++|||||++++++.+ +..+++||
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm 91 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 91 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence 5556799999999999995 46889999998754322 24578999999999999999999999864 34689999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCceeec-CCCCCeeccCCCcccCCCC-
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKG-RALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDG- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~- 206 (488)
||++||+|.+++. ....+++..+..++.||+.||.|||+++ +|+||||||+|||++ .++.+||+|||+++.....
T Consensus 92 E~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~ 169 (270)
T d1t4ha_ 92 ELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 169 (270)
T ss_dssp ECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred eCCCCCcHHHHHh--ccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCc
Confidence 9999999999997 3467999999999999999999999975 499999999999996 5789999999999865443
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
....||+.|||||++.+ .++.++|||||||++|||+||+.||........... .+........++...++++.+|
T Consensus 170 ~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~l 245 (270)
T d1t4ha_ 170 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVTSGVKPASFDKVAIPEVKEI 245 (270)
T ss_dssp BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHTTTCCCGGGGGCCCHHHHHH
T ss_pred cCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHH---HHHcCCCCcccCccCCHHHHHH
Confidence 34579999999999875 699999999999999999999999865321111001 1111111112233456789999
Q ss_pred HHHhccCCCCCCCCHHHHHHH
Q 011349 286 ASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~ 306 (488)
+.+||+.||++|||+.|+++|
T Consensus 246 i~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 246 IEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp HHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHccCCHhHCcCHHHHhCC
Confidence 999999999999999999986
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.3e-54 Score=419.96 Aligned_cols=250 Identities=19% Similarity=0.163 Sum_probs=211.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
|+.|++++.||+|+||+||+|.. .+|+.||||+++.....+...+.+|+.+|++++|||||++++++.+++.+||||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 34578999999999999999994 57999999999876544556789999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec--CCCCCeeccCCCcccCCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~-- 207 (488)
|+||+|.+.+.. ...++++.++..|+.||+.||.|||++| ||||||||+|||++ .++.+||+|||+++......
T Consensus 108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 999999988753 3456999999999999999999999999 99999999999997 67899999999998876543
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 286 (488)
...||+.|+|||++.+..++.++|||||||++|||+||+.||.+............. ............++++.+||
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li 263 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC--DWEFDEDAFSSVSPEAKDFI 263 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHC--CCCCCSSTTTTSCHHHHHHH
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCcccccCCCHHHHHHH
Confidence 357899999999999999999999999999999999999998765332211111100 11112223345678899999
Q ss_pred HHhccCCCCCCCCHHHHHHH
Q 011349 287 SRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 287 ~~cl~~dp~~Rps~~~il~~ 306 (488)
.+||+.||.+|||+.++++|
T Consensus 264 ~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 264 KNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp HTTSCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999987
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-54 Score=404.46 Aligned_cols=251 Identities=22% Similarity=0.323 Sum_probs=204.1
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceec-CCeeeEEEecC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE-GEERLLVAEFM 132 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~ 132 (488)
+++.+++.||+|+||.||+|.+ .|+.||||+++.+. ..+.|.+|++++++++|||||+++|+|.+ .+.+++||||+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~ 83 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 83 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence 3567888999999999999998 57789999997543 45789999999999999999999999865 45689999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Ccccc
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSYST 211 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~ 211 (488)
++|+|.+++.......+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....+
T Consensus 84 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~ 162 (262)
T d1byga_ 84 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 162 (262)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCccccc
Confidence 9999999997544456999999999999999999999999 999999999999999999999999999875443 34567
Q ss_pred ccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHHhc
Q 011349 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290 (488)
Q Consensus 212 t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 290 (488)
|+.|+|||++.++.+++++|||||||++|||+| |++|+...... .+...+....+.+++..+++++.+|+.+||
T Consensus 163 ~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~li~~cl 237 (262)
T d1byga_ 163 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGYKMDAPDGCPPAVYEVMKNCW 237 (262)
T ss_dssp CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHHTTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred cccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence 899999999999999999999999999999999 56554432211 122222233445566677889999999999
Q ss_pred cCCCCCCCCHHHHHHHhchhhcc
Q 011349 291 QYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 291 ~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
+.||.+|||+.+++++|+.++..
T Consensus 238 ~~dP~~Rps~~~l~~~L~~i~~~ 260 (262)
T d1byga_ 238 HLDAAMRPSFLQLREQLEHIKTH 260 (262)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCHhHCcCHHHHHHHHHHHHhC
Confidence 99999999999999999988653
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=5e-54 Score=417.26 Aligned_cols=248 Identities=20% Similarity=0.159 Sum_probs=208.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEecCC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP 133 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 133 (488)
.|.+++.||+|+||.||+|.. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++..|+|||||+
T Consensus 27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~ 106 (350)
T d1koaa2 27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 106 (350)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence 568899999999999999995 5799999999987654556679999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec--CCCCCeeccCCCcccCCCCC---c
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD--QDGNPRLSCFGLMKNSRDGK---S 208 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~---~ 208 (488)
||+|.+++.. ..+.+++..+..|+.||+.||.|||+++ ||||||||+|||++ .++.+||+|||+++...... .
T Consensus 107 gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 184 (350)
T d1koaa2 107 GGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 184 (350)
T ss_dssp SCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEE
T ss_pred CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheecccccccce
Confidence 9999999854 3456999999999999999999999999 99999999999995 46889999999998765543 4
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..||+.|||||++.+..++.++|||||||++|||+||+.||.+............. ............++++.+||.+
T Consensus 185 ~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li~~ 262 (350)
T d1koaa2 185 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC--DWNMDDSAFSGISEDGKDFIRK 262 (350)
T ss_dssp ECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCSCCGGGGGCCHHHHHHHHH
T ss_pred ecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCcccccCCCHHHHHHHHH
Confidence 57899999999999999999999999999999999999998754322211110000 0001111223456889999999
Q ss_pred hccCCCCCCCCHHHHHHH
Q 011349 289 CLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rps~~~il~~ 306 (488)
||..||++|||+.++++|
T Consensus 263 ~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 263 LLLADPNTRMTIHQALEH 280 (350)
T ss_dssp HCCSSGGGSCCHHHHHHS
T ss_pred HccCChhHCcCHHHHhcC
Confidence 999999999999999997
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-53 Score=410.19 Aligned_cols=244 Identities=18% Similarity=0.225 Sum_probs=210.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
++|.+++.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+.+|++++|||||++++++.+++.+|+||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ 84 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence 4578999999999999999994 679999999997432 234577899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC---
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 206 (488)
|||+||+|.+++. ..+.+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+.....
T Consensus 85 ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~ 161 (337)
T d1o6la_ 85 EYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161 (337)
T ss_dssp ECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred eccCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccCCcc
Confidence 9999999999987 4567999999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 207 -KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
...+||+.|+|||++.+..++.++|||||||++|||+||++||.+............ ....+|...++++.+|
T Consensus 162 ~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~------~~~~~p~~~s~~~~dl 235 (337)
T d1o6la_ 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM------EEIRFPRTLSPEAKSL 235 (337)
T ss_dssp BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH------CCCCCCTTSCHHHHHH
T ss_pred cccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhc------CCCCCCccCCHHHHHH
Confidence 356899999999999999999999999999999999999999877643322211111 1123455677889999
Q ss_pred HHHhccCCCCCCCC-----HHHHHHH
Q 011349 286 ASRCLQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 286 i~~cl~~dp~~Rps-----~~~il~~ 306 (488)
|.+||++||.+||+ ++++++|
T Consensus 236 i~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 236 LAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHhhccCCchhhcccccccHHHHHcC
Confidence 99999999999994 8899887
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-53 Score=405.21 Aligned_cols=247 Identities=15% Similarity=0.134 Sum_probs=205.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.|.+++.||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|+.+|++++|||||++++++.+++..|+
T Consensus 11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (293)
T d1jksa_ 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 90 (293)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 378999999999999999995 57999999999754321 24679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC----CCeeccCCCcccC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG----NPRLSCFGLMKNS 203 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 203 (488)
|||||+||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 9999999999999973 457999999999999999999999999 99999999999998776 4899999999876
Q ss_pred CCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 204 RDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 204 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.+............. ........+...++
T Consensus 168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~ 245 (293)
T d1jksa_ 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV--NYEFEDEYFSNTSA 245 (293)
T ss_dssp TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT--CCCCCHHHHTTSCH
T ss_pred CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhc--CCCCCchhcCCCCH
Confidence 543 3457899999999999999999999999999999999999998765332211110000 00001111223567
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
++.+||.+||+.||.+|||++++++|
T Consensus 246 ~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 246 LAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 89999999999999999999999986
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.1e-53 Score=404.91 Aligned_cols=244 Identities=18% Similarity=0.234 Sum_probs=209.9
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
++|++++.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+.+|++++|||||++++++.+++..|+||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 3578999999999999999995 569999999996432 234568999999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Cc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KS 208 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~ 208 (488)
||++||+|..++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... ..
T Consensus 84 E~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 160 (316)
T d1fota_ 84 DYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 160 (316)
T ss_dssp CCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred eecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence 9999999999887 4566899999999999999999999999 999999999999999999999999999876543 45
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..||+.|||||++.+..++.++|||||||++|||+||+.||........... +... ...++...++++.+++.+
T Consensus 161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li~~ 234 (316)
T d1fota_ 161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEK----ILNA--ELRFPPFFNEDVKDLLSR 234 (316)
T ss_dssp CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHHC--CCCCCTTSCHHHHHHHHH
T ss_pred ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHH----HHcC--CCCCCCCCCHHHHHHHHH
Confidence 6899999999999999999999999999999999999999876533222111 1111 123445567889999999
Q ss_pred hccCCCCCCC-----CHHHHHHH
Q 011349 289 CLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rp-----s~~~il~~ 306 (488)
||..||.+|+ |++++++|
T Consensus 235 ~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 235 LITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp HTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HhhhCHHhccccchhhHHHHHcC
Confidence 9999999996 89999987
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-53 Score=398.43 Aligned_cols=252 Identities=21% Similarity=0.268 Sum_probs=200.3
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE----DRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 128 (488)
+.+++++.||+|+||.||+|.+.. +..||||.++...... .+.|.+|+.+|++++|||||++++++. .+..++|
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv 85 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 85 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence 467888999999999999998532 3568999987544332 357999999999999999999999985 5678999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~ 163 (273)
T d1mp8a_ 86 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163 (273)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCcc
Confidence 999999999998754 4567999999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHHHH
Q 011349 207 ---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (488)
....||+.|+|||.+.+..++.++|||||||++|||+| |.+|+........ ...+......+.+..+++++
T Consensus 164 ~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~ 238 (273)
T d1mp8a_ 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-----IGRIENGERLPMPPNCPPTL 238 (273)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----HHHHHTTCCCCCCTTCCHHH
T ss_pred eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHH-----HHHHHcCCCCCCCCCCCHHH
Confidence 23456899999999999999999999999999999998 6766654322211 11111222334566778899
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 283 VRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+||.+||+.||++|||+.+|+++|+.+...
T Consensus 239 ~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 269 (273)
T d1mp8a_ 239 YSLMTKCWAYDPSRRPRFTELKAQLSTILEE 269 (273)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987643
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-53 Score=408.32 Aligned_cols=252 Identities=16% Similarity=0.257 Sum_probs=206.2
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCc----EEEEEEccCCC-CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD-EDR----WIAVKRFNRSA-WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
++|++++.||+|+||+||+|.+. +|+ .||||+++... ....+.|.+|+.+|++++|||||+++|+|.+ +..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeeE
Confidence 45789999999999999999853 444 58999987543 3346789999999999999999999999976 45778
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK 207 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 207 (488)
+|||+.+|+|.+.+.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.++++||+|||+++......
T Consensus 88 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 165 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165 (317)
T ss_dssp EEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred EEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence 8999999999998865 4567999999999999999999999999 9999999999999999999999999998654322
Q ss_pred ------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhhHH
Q 011349 208 ------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280 (488)
Q Consensus 208 ------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (488)
...||+.|+|||.+.++.++.++|||||||++|||+| |.+|+...... .+...+....+...+..+++
T Consensus 166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~-----~~~~~i~~~~~~~~p~~~~~ 240 (317)
T d1xkka_ 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILEKGERLPQPPICTI 240 (317)
T ss_dssp C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGG-----GHHHHHHHTCCCCCCTTBCH
T ss_pred ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHHcCCCCCCCcccCH
Confidence 2357899999999999999999999999999999999 56665443221 12222223334455667788
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 281 ELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 281 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
++.+|+.+||+.||.+|||+.+|+.+|..+...
T Consensus 241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~ 273 (317)
T d1xkka_ 241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 273 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999887653
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.4e-53 Score=402.84 Aligned_cols=251 Identities=23% Similarity=0.286 Sum_probs=208.0
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 127 (488)
.+.++++||+|+||+||+|++. +++.||||+++...... .++|.+|+.+|++++||||++++++|...+..++
T Consensus 14 ~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~ 93 (301)
T d1lufa_ 14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL 93 (301)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred HcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEE
Confidence 4588999999999999999853 35789999998654333 4579999999999999999999999999999999
Q ss_pred EEecCCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcee
Q 011349 128 VAEFMPNETLSKHLFHWE----------------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRIL 185 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nil 185 (488)
||||+++|+|.+++.... ...+++..++.|+.||+.||+|||+++ +|||||||+|||
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NIL 172 (301)
T d1lufa_ 94 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCL 172 (301)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEE
T ss_pred EEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccceE
Confidence 999999999999986421 235899999999999999999999999 999999999999
Q ss_pred ecCCCCCeeccCCCcccCCC------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCC-CCCcchhhhhh
Q 011349 186 FDQDGNPRLSCFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKH-IPPSHALDLIR 258 (488)
Q Consensus 186 l~~~~~~kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~-p~~~~~~~~~~ 258 (488)
++.++.+||+|||+++.... .....+|+.|+|||.+.+..++.++|||||||++|||++|.. |+.........
T Consensus 173 ld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~ 252 (301)
T d1lufa_ 173 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI 252 (301)
T ss_dssp ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred ECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHH
Confidence 99999999999999975432 224567899999999999999999999999999999999975 44433221111
Q ss_pred ccccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhh
Q 011349 259 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311 (488)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 311 (488)
..+........+..+++++.+|+.+||+.+|++||||.+|++.|+++.
T Consensus 253 -----~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 253 -----YYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp -----HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred -----HHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 111112233455667889999999999999999999999999998874
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-52 Score=400.85 Aligned_cols=257 Identities=21% Similarity=0.247 Sum_probs=209.7
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-CCc--EEEEEEccCCC-CCChHHHHHHHHHHhhc-CCCCCcccccceecCCeee
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLVD-EDR--WIAVKRFNRSA-WPDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 126 (488)
+|+++++.++||+|+||.||+|.+. +|. .||||+++... ....+.|.+|+++|+++ +|||||++++++.+++..+
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 3456678889999999999999954 454 47888886443 23456799999999999 7999999999999999999
Q ss_pred EEEecCCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCC
Q 011349 127 LVAEFMPNETLSKHLFHW--------------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNP 192 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~ 192 (488)
+||||++||+|.++|... ....+++.+++.++.||+.||.|||+.+ |+||||||+|||++.++.+
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 166 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCce
Confidence 999999999999998642 2367999999999999999999999999 9999999999999999999
Q ss_pred eeccCCCcccCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCC-CCcchhhhhhcccccccccc
Q 011349 193 RLSCFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI-PPSHALDLIRGKNFLMLMDS 268 (488)
Q Consensus 193 kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p-~~~~~~~~~~~~~~~~~~~~ 268 (488)
||+|||+++..... ....||+.|+|||.+.++.++.++|||||||++|||++|..| +........ ...+..
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~-----~~~i~~ 241 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-----YEKLPQ 241 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----HHHGGG
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHH-----HHHHHh
Confidence 99999999765432 244678999999999999999999999999999999998754 433222111 111222
Q ss_pred ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 269 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..+...+..+++++.+||.+||+.||++|||+.+|+++|+++....
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~ 287 (309)
T d1fvra_ 242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 287 (309)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 2334556677899999999999999999999999999999987654
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-53 Score=396.52 Aligned_cols=250 Identities=20% Similarity=0.256 Sum_probs=198.1
Q ss_pred CcccccccCCCCCCceEEEEEeCC--C--cEEEEEEccCCCCC---ChHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE--D--RWIAVKRFNRSAWP---DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
.++++++.||+|+||.||+|++.. + ..||||+++..... ..+.|.+|+.+|++++|||||+++|++.+ +..+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 457889999999999999998532 2 36899999765422 24579999999999999999999999965 5678
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||+++|+|.+.+.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 87 lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~ 164 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164 (273)
T ss_dssp EEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeeeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhcccC
Confidence 99999999999988764 3456999999999999999999999999 999999999999999999999999999876443
Q ss_pred C-------ccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 207 K-------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 207 ~-------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
. ...++..|+|||.+.+..++.++|||||||++|||+| |+.||.+....... ..+.....+.+.+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~ 240 (273)
T d1u46a_ 165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL----HKIDKEGERLPRPEDC 240 (273)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH----HHHHTSCCCCCCCTTC
T ss_pred CCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHH----HHHHhCCCCCCCcccc
Confidence 2 2346789999999999999999999999999999998 78887654332221 1122222333455667
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHhchh
Q 011349 279 GTELVRLASRCLQYEPRERPNAKSLVASLTPL 310 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 310 (488)
++.+.+|+.+||+.||++|||+.+|++.|++.
T Consensus 241 ~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 241 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 78999999999999999999999999988764
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.6e-52 Score=393.85 Aligned_cols=249 Identities=18% Similarity=0.144 Sum_probs=208.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---------hHHHHHHHHHHhhcC-CCCCcccccceec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---------SRQFLEEARAVGLLR-SERLVNLIGCCCE 121 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 121 (488)
|..|.+++.||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+.+|++++ |||||++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 45778999999999999999995 579999999997654322 135889999999997 9999999999999
Q ss_pred CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 122 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
++..||||||++||+|.++|.. .+.+++.++..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccchhee
Confidence 9999999999999999999973 557999999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC---CccccccCCCCcccccc------CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCC
Q 011349 202 NSRDG---KSYSTNLAFTPPEYLRT------GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272 (488)
Q Consensus 202 ~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 272 (488)
..... ....||+.|+|||.+.+ ..++.++||||+||++|||+||+.||................. ....
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~--~~~~ 236 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--QFGS 236 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCC--CCCC
Confidence 76543 34578999999999864 3468899999999999999999999876543222111111100 1122
Q ss_pred CCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 273 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
......++++.+|+.+||+.||.+|||+.++++|
T Consensus 237 ~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 237 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred cccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 2334567899999999999999999999999887
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.9e-52 Score=395.06 Aligned_cols=253 Identities=19% Similarity=0.188 Sum_probs=204.1
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC---hHHHHHHHHHHhhcCCCCCcccccceecCC----ee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD---SRQFLEEARAVGLLRSERLVNLIGCCCEGE----ER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~ 125 (488)
+.|.+++.||+|+||.||+|.. .+|+.||||+++.....+ ...+.+|+++|+.++|||||++++++...+ ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 3478999999999999999994 579999999998765443 346899999999999999999999987643 37
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
|+||||++|++|.+++. ..+++++.++..++.||+.||.|||+++ |+||||||+|||++.++..+|+|||.++....
T Consensus 87 ~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~ 163 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIAD 163 (277)
T ss_dssp EEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred EEEEECCCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhhcc
Confidence 99999999999999886 4467999999999999999999999999 99999999999999999999999999875432
Q ss_pred C-------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhh
Q 011349 206 G-------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDD 278 (488)
Q Consensus 206 ~-------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (488)
. ....||+.|+|||++.+..+++++|||||||++|||+||+.||................ ...........
T Consensus 164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 241 (277)
T d1o6ya_ 164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEGL 241 (277)
T ss_dssp ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC--CCCGGGTSSSC
T ss_pred ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcC--CCCCchhccCC
Confidence 2 24578999999999999999999999999999999999999987653322211111110 01111223345
Q ss_pred HHHHHHHHHHhccCCCCCCC-CHHHHHHHhchhh
Q 011349 279 GTELVRLASRCLQYEPRERP-NAKSLVASLTPLQ 311 (488)
Q Consensus 279 ~~~l~~li~~cl~~dp~~Rp-s~~~il~~l~~~~ 311 (488)
++++.+++.+||+.||.+|| |++++++.|.+++
T Consensus 242 s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 242 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 78899999999999999998 8999999988775
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.3e-52 Score=405.81 Aligned_cols=244 Identities=16% Similarity=0.167 Sum_probs=209.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 129 (488)
+.|++++.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|+.+|+.++|||||++++++.+....++||
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence 4689999999999999999995 579999999986432 234567899999999999999999999999999999999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC-Cc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KS 208 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~ 208 (488)
||+.||+|..++.. .+.+++..+..++.||+.||.|||+++ ||||||||+|||++.+|++||+|||+++..... ..
T Consensus 121 e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~ 197 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 197 (350)
T ss_dssp ECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred ccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeeccccccc
Confidence 99999999999873 457999999999999999999999999 999999999999999999999999999876543 45
Q ss_pred cccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHHHHH
Q 011349 209 YSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASR 288 (488)
Q Consensus 209 ~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 288 (488)
..||+.|||||++.+..++.++|||||||++|||+||+.||.+......... +... ....+...++++.+|+.+
T Consensus 198 ~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~----i~~~--~~~~p~~~s~~~~~li~~ 271 (350)
T d1rdqe_ 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK----IVSG--KVRFPSHFSSDLKDLLRN 271 (350)
T ss_dssp CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHC--CCCCCTTCCHHHHHHHHH
T ss_pred ccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHH----HhcC--CCCCCccCCHHHHHHHHH
Confidence 6899999999999999999999999999999999999999876532221111 1111 122345567889999999
Q ss_pred hccCCCCCCC-----CHHHHHHH
Q 011349 289 CLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 289 cl~~dp~~Rp-----s~~~il~~ 306 (488)
||..||.+|+ |++++++|
T Consensus 272 ~L~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 272 LLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HhhhCHHhccccccccHHHHHcC
Confidence 9999999994 89999986
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-52 Score=401.35 Aligned_cols=246 Identities=15% Similarity=0.137 Sum_probs=199.4
Q ss_pred ccccccc-CCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhc-CCCCCcccccceec----CCeeeE
Q 011349 55 ADNIVSE-HGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLL-RSERLVNLIGCCCE----GEERLL 127 (488)
Q Consensus 55 ~~~~~~~-lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~----~~~~~l 127 (488)
.|.++++ ||+|+||+||+|.. .+++.||||+++. ...+.+|+.++.++ +|||||+++++|.+ ...+|+
T Consensus 12 ~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~i 86 (335)
T d2ozaa1 12 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 86 (335)
T ss_dssp TEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred CEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEE
Confidence 4677764 99999999999994 6799999999853 46788999997766 79999999999865 456899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC---CCCCeeccCCCcccCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ---DGNPRLSCFGLMKNSR 204 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~ 204 (488)
|||||+||+|.++|.......+++.++..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 87 vmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~ 165 (335)
T d2ozaa1 87 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 165 (335)
T ss_dssp EEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCEECC
T ss_pred EEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-Cccccccccccccccccccccccccccceeeecc
Confidence 999999999999997544567999999999999999999999999 999999999999975 5679999999998654
Q ss_pred CC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccC--CCCChhhH
Q 011349 205 DG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLE--GHFSNDDG 279 (488)
Q Consensus 205 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 279 (488)
.. ....||+.|||||++.+..++.++|||||||++|+|+||+.||.+.............+...... .......+
T Consensus 166 ~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s 245 (335)
T d2ozaa1 166 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 245 (335)
T ss_dssp CCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSC
T ss_pred CCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCC
Confidence 43 35678999999999999999999999999999999999999986542211111111111111111 11112456
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+|+.+||+.||++|||+.++++|
T Consensus 246 ~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 246 EEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 889999999999999999999999987
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-52 Score=399.84 Aligned_cols=255 Identities=21% Similarity=0.266 Sum_probs=198.9
Q ss_pred CCcccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecC-C
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEG-E 123 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-~ 123 (488)
.+.+.++++||+|+||.||+|.+. +++.||||+++..... ..+.+.+|...+.++ +|+|||.+++++... .
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 91 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence 356789999999999999999843 2467999999765432 245688888888888 689999999987664 4
Q ss_pred eeeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
..++|||||++|+|.+++.... ...+++.+++.++.||+.||.|||+++ ||||||||+|||++++
T Consensus 92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~~ 170 (299)
T d1ywna1 92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEK 170 (299)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGG
T ss_pred eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECCC
Confidence 6899999999999999996421 235899999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCC-CCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI-PPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p-~~~~~~~~~~~~~~ 262 (488)
+++||+|||+++..... ....||+.|+|||.+.+..++.++|||||||++|||+||..| +...... ..+
T Consensus 171 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~----~~~ 246 (299)
T d1ywna1 171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEF 246 (299)
T ss_dssp GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS----HHH
T ss_pred CcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH----HHH
Confidence 99999999999865432 234689999999999999999999999999999999998654 4332111 111
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
...+........+..+++++.+++.+||+.||++|||+.+++++|+.+.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 247 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 12222223344556677899999999999999999999999999998754
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-52 Score=401.73 Aligned_cols=245 Identities=17% Similarity=0.202 Sum_probs=207.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
|+.|.+++.||+|+||+||+|.. .+|+.||||+++... .+...+.+|+++|+.++|||||++++++.+++.+|+||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 67789999999999999999995 578899999997654 3345688999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC--CCCeeccCCCcccCCCCC--
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD--GNPRLSCFGLMKNSRDGK-- 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~--~~~kl~Dfgla~~~~~~~-- 207 (488)
|+||+|.+++.. .+..+++.++..|+.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 83 ~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~ 160 (321)
T d1tkia_ 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence 999999999964 3346999999999999999999999999 9999999999999854 579999999998765543
Q ss_pred -ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCC----hhhHHHH
Q 011349 208 -SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS----NDDGTEL 282 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 282 (488)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..||........... +.... ..++ ...++++
T Consensus 161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~----i~~~~--~~~~~~~~~~~s~~~ 234 (321)
T d1tkia_ 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN----IMNAE--YTFDEEAFKEISIEA 234 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHHTC--CCCCHHHHTTSCHHH
T ss_pred cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhCC--CCCChhhccCCCHHH
Confidence 34678999999999999999999999999999999999999876533221111 11110 0111 1346789
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHH
Q 011349 283 VRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 283 ~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.+|+.+||..||.+|||+.++++|
T Consensus 235 ~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 235 MDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999999987
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-52 Score=396.22 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=204.4
Q ss_pred ccCCCCCCceEEEEEeCCC----cEEEEEEccCCCC-CChHHHHHHHHHHhhcCCCCCcccccceec-CCeeeEEEecCC
Q 011349 60 SEHGEKAPNVVYKGLVDED----RWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCE-GEERLLVAEFMP 133 (488)
Q Consensus 60 ~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~ 133 (488)
+.||+|+||+||+|.+..+ ..||||+++.... ...++|.+|+++|++++|||||+++|++.. ++..++|||||+
T Consensus 33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~ 112 (311)
T d1r0pa_ 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112 (311)
T ss_dssp EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence 4689999999999995432 3589999975432 234679999999999999999999999875 458999999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC------
Q 011349 134 NETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK------ 207 (488)
Q Consensus 134 ~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------ 207 (488)
+|+|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 113 ~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~ 190 (311)
T d1r0pa_ 113 HGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 190 (311)
T ss_dssp TCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC
T ss_pred cCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhcccccccccee
Confidence 9999998864 4556889999999999999999999999 9999999999999999999999999998654321
Q ss_pred --ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHHH
Q 011349 208 --SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285 (488)
Q Consensus 208 --~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (488)
...||+.|+|||.+.++.++.++||||||+++|||+||+.||...... ......+....+...+..+++++.+|
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~----~~~~~~i~~g~~~~~p~~~~~~l~~l 266 (311)
T d1r0pa_ 191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FDITVYLLQGRRLLQPEYCPDPLYEV 266 (311)
T ss_dssp TTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred cccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH----HHHHHHHHcCCCCCCcccCcHHHHHH
Confidence 245789999999999999999999999999999999988877654211 11111111222334455677899999
Q ss_pred HHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 286 ASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 286 i~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+.+||+.||++|||+.+|+++|+.+....
T Consensus 267 i~~cl~~dP~~RPs~~ei~~~L~~i~~~~ 295 (311)
T d1r0pa_ 267 MLKCWHPKAEMRPSFSELVSRISAIFSTF 295 (311)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999997653
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=393.68 Aligned_cols=253 Identities=21% Similarity=0.298 Sum_probs=206.9
Q ss_pred CcccccccCCCCCCceEEEEEeCC--------CcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCC
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDE--------DRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGE 123 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 123 (488)
+.+.+++.||+|+||.||+|+... +..||||+++..... ...++.+|+..+.++ +|||||+++++|.+++
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 567889999999999999998422 247999999876532 246789999999999 7999999999999999
Q ss_pred eeeEEEecCCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 124 ERLLVAEFMPNETLSKHLFHWE--------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
..++||||+++|+|.++|.... ...+++.+++.++.||+.||+|||+.+ ||||||||+|||++.+
T Consensus 93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~~ 171 (299)
T d1fgka_ 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 171 (299)
T ss_dssp SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTT
T ss_pred eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecCC
Confidence 9999999999999999996432 246899999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhh-CCCCCCcchhhhhhcccc
Q 011349 190 GNPRLSCFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNF 262 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 262 (488)
+.+||+|||+++..... ....+|+.|+|||.+.++.++.++|||||||++|||+| |.+|+....... .
T Consensus 172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~-----~ 246 (299)
T d1fgka_ 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-----L 246 (299)
T ss_dssp CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----H
T ss_pred CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH-----H
Confidence 99999999999865432 23567899999999999999999999999999999998 565554432221 1
Q ss_pred ccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
...+........+..+++++.+|+.+||+.||++|||+.+|++.|+++..
T Consensus 247 ~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 247 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp HHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 12222333445566678899999999999999999999999999988754
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=7.5e-52 Score=404.34 Aligned_cols=247 Identities=19% Similarity=0.169 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC---CChHHHHHH---HHHHhhcCCCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW---PDSRQFLEE---ARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E---~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
++|.+++.||+|+||.||+|+. .+|+.||||++..... .....+.+| +.+++.++|||||++++++.+.+..|
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ 83 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 83 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence 5678999999999999999995 5699999999864321 122334444 66777778999999999999999999
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||||++||+|.++|. ....+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++.....
T Consensus 84 ivmE~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~ 160 (364)
T d1omwa3 84 FILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 160 (364)
T ss_dssp EEECCCCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred EEEEecCCCcHHHHHH--hcccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeecCCC
Confidence 9999999999999997 3467899999999999999999999999 999999999999999999999999999876543
Q ss_pred --CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHH
Q 011349 207 --KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELV 283 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 283 (488)
....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.......... +... ........+...++++.
T Consensus 161 ~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~--~~~~-~~~~~~~~~~~~s~~~~ 237 (364)
T d1omwa3 161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRM-TLTMAVELPDSFSPELR 237 (364)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH--HHHH-SSSCCCCCCSSSCHHHH
T ss_pred cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh-cccCCCCCCCCCCHHHH
Confidence 35679999999999975 568999999999999999999999986542211100 0000 01112234455678899
Q ss_pred HHHHHhccCCCCCCCC-----HHHHHHH
Q 011349 284 RLASRCLQYEPRERPN-----AKSLVAS 306 (488)
Q Consensus 284 ~li~~cl~~dp~~Rps-----~~~il~~ 306 (488)
+||.+||+.||.+||| ++++++|
T Consensus 238 ~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 238 SLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp HHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred HHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence 9999999999999999 6999987
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-52 Score=398.08 Aligned_cols=244 Identities=18% Similarity=0.235 Sum_probs=205.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCC---CCChHHHHHHHHHHh-hcCCCCCcccccceecCCeeeEE
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSA---WPDSRQFLEEARAVG-LLRSERLVNLIGCCCEGEERLLV 128 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~~~~~~lv 128 (488)
.+|.+++.||+|+||+||+|+. .+|+.||||+++... ....+.+..|..++. .++|||||++++++.+++..|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 3578899999999999999995 579999999996432 234556777877765 67999999999999999999999
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC--
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-- 206 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 206 (488)
|||++||+|.+++. ....+++.++..++.||+.||.|||+++ |+||||||+|||+++++++||+|||+++.....
T Consensus 82 mEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhcccccc
Confidence 99999999999997 4556999999999999999999999999 999999999999999999999999999865432
Q ss_pred --CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhHHHHHH
Q 011349 207 --KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284 (488)
Q Consensus 207 --~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (488)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+........... . ....++...++++.+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~----~--~~~~~p~~~s~~~~d 232 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR----M--DNPFYPRWLEKEAKD 232 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH----H--CCCCCCTTSCHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH----c--CCCCCCccCCHHHHH
Confidence 34578999999999999999999999999999999999999987654332211111 1 122345566788999
Q ss_pred HHHHhccCCCCCCCCHH-HHHHH
Q 011349 285 LASRCLQYEPRERPNAK-SLVAS 306 (488)
Q Consensus 285 li~~cl~~dp~~Rps~~-~il~~ 306 (488)
|+.+||..||.+|||+. ++++|
T Consensus 233 li~~~L~~dP~~R~s~~~~l~~h 255 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIRQH 255 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHhcccCCCCCcCHHHHHHhC
Confidence 99999999999999996 78765
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-51 Score=390.90 Aligned_cols=246 Identities=19% Similarity=0.199 Sum_probs=195.2
Q ss_pred ccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC-----hHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 58 IVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD-----SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 58 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
.++.||+|+||+||+|.. .+|+.||||+++...... .+.+.+|+.+|++++|||||++++++.+++..|+||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 357789999999999994 579999999997554222 24689999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+.|+++..++. .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence 99887776654 4567999999999999999999999999 999999999999999999999999999866442 2
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------ccc---cccccccC-
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NFL---MLMDSCLE- 271 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----------~~~---~~~~~~~~- 271 (488)
...||+.|+|||++.+ ..++.++|||||||++|||+||.+||.+......... .+. ........
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 4568999999999875 4579999999999999999999988875432211000 000 00000000
Q ss_pred --CCC-----ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 272 --GHF-----SNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 272 --~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
... ....++++.+|+.+||+.||++|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 000 11345789999999999999999999999987
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-51 Score=391.49 Aligned_cols=253 Identities=20% Similarity=0.298 Sum_probs=207.9
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEccCCCCCC-hHHHHHHHHHHhhcCCCCCcccccceecCCeee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVD------EDRWIAVKRFNRSAWPD-SRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 126 (488)
+.+.++++||+|+||.||+|.+. +++.||||+++...... ...|.+|+.++++++|||||++++++..++..+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 99 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 99 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence 45578899999999999999853 35789999997654222 346899999999999999999999999999999
Q ss_pred EEEecCCCCChhhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCC
Q 011349 127 LVAEFMPNETLSKHLFHW--------ENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 198 (488)
+||||+++|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++++||+|||
T Consensus 100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFG 178 (308)
T d1p4oa_ 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 178 (308)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeecc
Confidence 999999999999988632 2245799999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCC-CCcchhhhhhccccccccccccC
Q 011349 199 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI-PPSHALDLIRGKNFLMLMDSCLE 271 (488)
Q Consensus 199 la~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~ 271 (488)
+++..... ....+|+.|+|||.+.+..++.++|||||||++|||+||..| +.+...... ...+.....
T Consensus 179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~-----~~~i~~~~~ 253 (308)
T d1p4oa_ 179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-----LRFVMEGGL 253 (308)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH-----HHHHHTTCC
T ss_pred cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHhCCC
Confidence 99865432 234578999999999999999999999999999999999644 433221111 111111223
Q ss_pred CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhc
Q 011349 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312 (488)
Q Consensus 272 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 312 (488)
...+..+++.+.+|+.+||+.+|++|||+.+|+++|++...
T Consensus 254 ~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 34455677899999999999999999999999999977644
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-51 Score=392.43 Aligned_cols=256 Identities=20% Similarity=0.288 Sum_probs=211.8
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhc-CCCCCcccccceecCCee
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLL-RSERLVNLIGCCCEGEER 125 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 125 (488)
+++.+.+.||+|+||.||+|++ .+++.||||+++..... ....|.+|+.++.++ +|||||++++++.+++..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 3567888999999999999984 34678999999865533 244689999999999 699999999999999999
Q ss_pred eEEEecCCCCChhhhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCC
Q 011349 126 LLVAEFMPNETLSKHLFHWE----------------NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~ 189 (488)
++|||||++|+|.+++.... ...+++..+..++.||+.||.|||+++ +|||||||+|||++.+
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~ 181 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccccccccccccc
Confidence 99999999999999986432 236899999999999999999999999 9999999999999999
Q ss_pred CCCeeccCCCcccCCCCC------ccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc
Q 011349 190 GNPRLSCFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL 263 (488)
Q Consensus 190 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 263 (488)
+.+|++|||+++...... ...||+.|+|||.+.++.++.++|||||||++|||+|++.|+...... ...+.
T Consensus 182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~---~~~~~ 258 (311)
T d1t46a_ 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV---DSKFY 258 (311)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS---SHHHH
T ss_pred CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCH---HHHHH
Confidence 999999999998765432 346789999999999999999999999999999999965554322110 11122
Q ss_pred cccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.++....+...+...++.+.+|+.+||+.||.+|||+.+|++.|+++...
T Consensus 259 ~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~ 308 (311)
T d1t46a_ 259 KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (311)
T ss_dssp HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence 23333344455566778999999999999999999999999999876554
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-50 Score=384.56 Aligned_cols=251 Identities=20% Similarity=0.232 Sum_probs=199.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
+.|.++++||+|+||+||+|.. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+++..|+|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 3568899999999999999994 6799999999975542 235689999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---- 206 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 206 (488)
|+.+ ++.+++.......+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~ 159 (298)
T d1gz8a_ 82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159 (298)
T ss_dssp CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence 9975 5555554445677999999999999999999999999 999999999999999999999999999765432
Q ss_pred CccccccCCCCccccccCC-cccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------cc---ccc------
Q 011349 207 KSYSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------NF---LML------ 265 (488)
Q Consensus 207 ~~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----------~~---~~~------ 265 (488)
....||+.|+|||.+.... ++.++|||||||++|+|++|+.||.+......... .. ...
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence 3457899999999887655 57899999999999999999999865422111000 00 000
Q ss_pred cccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 MDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
........ .....++++.+|+.+||..||.+|||++++++|
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00000000 011235788999999999999999999999997
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-51 Score=384.52 Aligned_cols=238 Identities=20% Similarity=0.314 Sum_probs=199.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC------ChHHHHHHHHHHhhcC--CCCCcccccceecCCe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP------DSRQFLEEARAVGLLR--SERLVNLIGCCCEGEE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~ 124 (488)
++|.+.+.||+|+||+||+|+. .+|+.||||+++..... ....+.+|+.+|++++ |||||++++++.+++.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 3578889999999999999994 57999999999754322 1235779999999996 8999999999999999
Q ss_pred eeEEEecCCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-CCCCeeccCCCccc
Q 011349 125 RLLVAEFMPN-ETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-DGNPRLSCFGLMKN 202 (488)
Q Consensus 125 ~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~ 202 (488)
.++||||+.+ +++.+++. .+..+++.++..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++.
T Consensus 84 ~~lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a~~ 160 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGAL 160 (273)
T ss_dssp EEEEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEEeccCcchHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECcccccee
Confidence 9999999976 57777776 3467999999999999999999999999 999999999999985 57899999999986
Q ss_pred CCCC--CccccccCCCCccccccCCc-ccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChhhH
Q 011349 203 SRDG--KSYSTNLAFTPPEYLRTGRV-IPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279 (488)
Q Consensus 203 ~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (488)
.... ....||+.|+|||++.+..+ +.++|||||||++|||+||+.||..... .... ...++...+
T Consensus 161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-i~~~-----------~~~~~~~~s 228 (273)
T d1xwsa_ 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-IIRG-----------QVFFRQRVS 228 (273)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-HHHC-----------CCCCSSCCC
T ss_pred cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH-Hhhc-----------ccCCCCCCC
Confidence 5443 35679999999999987665 6789999999999999999998865421 1111 112334456
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 280 TELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 280 ~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+++.+|+.+||+.||++|||++++++|
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 889999999999999999999999986
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-50 Score=386.50 Aligned_cols=251 Identities=16% Similarity=0.211 Sum_probs=194.9
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHH--HHHHHHhhcCCCCCcccccceecCC----eeeEEE
Q 011349 56 DNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFL--EEARAVGLLRSERLVNLIGCCCEGE----ERLLVA 129 (488)
Q Consensus 56 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 129 (488)
+.+.++||+|+||.||+|++ +|+.||||+++... .+.+. .|+..+.+++|||||++++++.+.+ ..++||
T Consensus 5 ~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 34567899999999999987 68899999996543 33444 4555556789999999999997654 579999
Q ss_pred ecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh--------CCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS--------KGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 130 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
||+++|+|.+++.. ..++|.+++.++.|++.||.|||+ ++ ||||||||+|||++.++.+||+|||+++
T Consensus 81 Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl~~ 156 (303)
T d1vjya_ 81 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCccc
Confidence 99999999999963 469999999999999999999997 46 9999999999999999999999999998
Q ss_pred cCCCC--------CccccccCCCCccccccC------CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-------
Q 011349 202 NSRDG--------KSYSTNLAFTPPEYLRTG------RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK------- 260 (488)
Q Consensus 202 ~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~------- 260 (488)
..... ....||+.|+|||++.+. .++.++|||||||+||||+||..|+...........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T d1vjya_ 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence 65332 245689999999998753 367799999999999999999876533211100000
Q ss_pred ----ccccccccccCCCCC-----hhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 261 ----NFLMLMDSCLEGHFS-----NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 261 ----~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
..........++..+ ...+..+.+|+.+||+.||++|||+.+|++.|+++..+.
T Consensus 237 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 299 (303)
T d1vjya_ 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence 000111112222222 234567999999999999999999999999999988654
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=4.8e-50 Score=380.53 Aligned_cols=250 Identities=18% Similarity=0.214 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEec
Q 011349 54 CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 131 (488)
+.|.++++||+|+||+||+|.+.+|+.||||+++.... ...+.+.+|+.+|++++|||||++++++..++..++||||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 35789999999999999999988999999999976532 2256899999999999999999999999999999999999
Q ss_pred CCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC----C
Q 011349 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----K 207 (488)
Q Consensus 132 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 207 (488)
+.++.+..+.. ..+.+++..+..++.||+.||.|||+.+ ||||||||+|||++.++.+||+|||++...... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 158 (286)
T d1ob3a_ 82 LDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (286)
T ss_dssp CSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred ehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence 98777666654 4577999999999999999999999999 999999999999999999999999998765432 3
Q ss_pred ccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc-----------c---cccc-------
Q 011349 208 SYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK-----------N---FLML------- 265 (488)
Q Consensus 208 ~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~-----------~---~~~~------- 265 (488)
...+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.+......... . ....
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T d1ob3a_ 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (286)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence 4467899999999876 4568999999999999999999999865421110000 0 0000
Q ss_pred --cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 --MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 --~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.............++.+.+|+.+||+.||++|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000111223456789999999999999999999999976
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-49 Score=379.90 Aligned_cols=251 Identities=20% Similarity=0.215 Sum_probs=198.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CC-CcEEEEEEccCCCC--CChHHHHHHHHHHhhc---CCCCCcccccceec-----
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DE-DRWIAVKRFNRSAW--PDSRQFLEEARAVGLL---RSERLVNLIGCCCE----- 121 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~----- 121 (488)
+.|.++++||+|+||+||+|.. .+ ++.||||+++.... .....+.+|+.+|+.+ +||||++++++|..
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~ 86 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 86 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence 3578999999999999999995 44 66799999865332 2234677888888777 79999999999853
Q ss_pred CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 122 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
....+++|||+.++++.... ......+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++
T Consensus 87 ~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~~~ 164 (305)
T d1blxa_ 87 ETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 164 (305)
T ss_dssp EEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhhhh
Confidence 34689999999877665433 335667999999999999999999999999 9999999999999999999999999988
Q ss_pred cCCCC---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-----------cc----
Q 011349 202 NSRDG---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-----------FL---- 263 (488)
Q Consensus 202 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-----------~~---- 263 (488)
..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.......... +.
T Consensus 165 ~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (305)
T d1blxa_ 165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244 (305)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred hhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccccc
Confidence 65432 3567899999999999999999999999999999999999998754321110000 00
Q ss_pred ---cc---cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 ---ML---MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 ---~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.. ........+....++.+.+|+.+||+.||++|||+.|+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00 00000111233456789999999999999999999999987
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-48 Score=377.12 Aligned_cols=253 Identities=17% Similarity=0.246 Sum_probs=196.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceecCC------e
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCEGE------E 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~ 124 (488)
+.|.++++||+|+||+||+|.. .+|+.||||+++...... .+.+.+|+++|++++|||||+++++|...+ .
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~ 97 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 97 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence 3578899999999999999994 569999999997654222 357889999999999999999999997654 4
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
+|+||||+ +.+|..++. ...+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~ 172 (346)
T d1cm8a_ 98 FYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQAD 172 (346)
T ss_dssp CEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceeccC
Confidence 79999999 678887774 456999999999999999999999999 9999999999999999999999999998765
Q ss_pred CC-CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhc-------c---------c-----
Q 011349 205 DG-KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRG-------K---------N----- 261 (488)
Q Consensus 205 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~-------~---------~----- 261 (488)
.. ....||+.|+|||.+.+ ..++.++|||||||++|||++|++||.......... . .
T Consensus 173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (346)
T d1cm8a_ 173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252 (346)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence 54 35678999999999876 456899999999999999999999886542111000 0 0
Q ss_pred -cccccccccC---CCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH--hchhh
Q 011349 262 -FLMLMDSCLE---GHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS--LTPLQ 311 (488)
Q Consensus 262 -~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--l~~~~ 311 (488)
.......... .......++.+.+|+.+||..||.+|||+.++++| ++.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 0000000000 11223346788999999999999999999999998 44443
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-48 Score=376.59 Aligned_cols=252 Identities=22% Similarity=0.227 Sum_probs=195.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcccccceecC------CeeeE
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEG------EERLL 127 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~l 127 (488)
.|+.++.||+|+||+||+|+. .+|+.||||++.... ..+.+|+.+|++++|||||+++++|... ..+++
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 456778899999999999995 579999999997654 2335799999999999999999998543 34789
Q ss_pred EEecCCCCChhhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCC
Q 011349 128 VAEFMPNETLSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRD 205 (488)
Q Consensus 128 v~e~~~~gsL~~~l~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~ 205 (488)
||||++++.+..+.. ......+++.++..|+.||+.||.|||++| |+||||||+|||++.++ .+||+|||+++....
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhccC
Confidence 999998654433322 124567999999999999999999999999 99999999999999775 899999999987644
Q ss_pred C---CccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhcc---------------------
Q 011349 206 G---KSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGK--------------------- 260 (488)
Q Consensus 206 ~---~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~--------------------- 260 (488)
. .+..||+.|+|||.+.+ ..++.++|||||||++|||++|++||...........
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 255 (350)
T d1q5ka_ 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255 (350)
T ss_dssp TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence 3 35678999999998875 5689999999999999999999998865432111000
Q ss_pred --ccccccccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH--hchhh
Q 011349 261 --NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS--LTPLQ 311 (488)
Q Consensus 261 --~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--l~~~~ 311 (488)
.+................++++.+|+.+||..||++|||+.|+++| ++.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 310 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence 0000000001111223456789999999999999999999999987 44443
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-48 Score=376.33 Aligned_cols=248 Identities=16% Similarity=0.196 Sum_probs=192.3
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC-ChHHHHHHHHHHhhcCCCCCcccccceecCC----eeeEE
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP-DSRQFLEEARAVGLLRSERLVNLIGCCCEGE----ERLLV 128 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv 128 (488)
.|++++.||+|+||+||+|. ..+|+.||||+++..... ..+.+.+|+.+|++++||||+++++++.... ..+++
T Consensus 9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l 88 (345)
T d1pmea_ 9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL 88 (345)
T ss_dssp TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence 47899999999999999999 467999999999754422 2457899999999999999999999986543 23445
Q ss_pred EecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC---
Q 011349 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--- 205 (488)
Q Consensus 129 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 205 (488)
++|+.||+|.+++. ...+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++....
T Consensus 89 ~~~~~~g~L~~~l~---~~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~ 164 (345)
T d1pmea_ 89 VTHLMGADLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 164 (345)
T ss_dssp EEECCCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred EEeecCCchhhhhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence 55666899999995 346999999999999999999999999 99999999999999999999999999975533
Q ss_pred ----CCccccccCCCCcccccc-CCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc-----------------
Q 011349 206 ----GKSYSTNLAFTPPEYLRT-GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL----------------- 263 (488)
Q Consensus 206 ----~~~~~~t~~y~aPE~~~~-~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~----------------- 263 (488)
.....||+.|+|||.+.. ..++.++||||+||++|||++|+.||..............
T Consensus 165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T d1pmea_ 165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 244 (345)
T ss_dssp BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhh
Confidence 234568999999999854 5678899999999999999999999865422111000000
Q ss_pred -----cccccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 -----MLMDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 -----~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.......... .....++++.+|+.+||+.||.+|||+.++++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 245 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000000000 111335679999999999999999999999987
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-48 Score=370.89 Aligned_cols=252 Identities=17% Similarity=0.180 Sum_probs=195.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCC--CChHHHHHHHHHHhhcCCCCCcccccceec--------
Q 011349 53 FCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAW--PDSRQFLEEARAVGLLRSERLVNLIGCCCE-------- 121 (488)
Q Consensus 53 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 121 (488)
.+.|.++++||+|+||+||+|+. .+|+.||||++..... ....++.+|+.+|++++||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 46788999999999999999995 5799999999865432 335679999999999999999999998855
Q ss_pred CCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 122 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
....++||||+.++.+..... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg~~~ 165 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLAR 165 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecceee
Confidence 345899999998776665443 4567999999999999999999999999 9999999999999999999999999997
Q ss_pred cCCCC--------CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc-------cccc
Q 011349 202 NSRDG--------KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN-------FLML 265 (488)
Q Consensus 202 ~~~~~--------~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~-------~~~~ 265 (488)
..... ....||+.|+|||.+.+. .+++++|||||||++|||+||+.||.+.......... ....
T Consensus 166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 245 (318)
T d3blha1 166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 245 (318)
T ss_dssp ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred ecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhh
Confidence 55421 235689999999998764 6899999999999999999999988654221110000 0000
Q ss_pred ------------cccccCCCCCh-------hhHHHHHHHHHHhccCCCCCCCCHHHHHHHh
Q 011349 266 ------------MDSCLEGHFSN-------DDGTELVRLASRCLQYEPRERPNAKSLVASL 307 (488)
Q Consensus 266 ------------~~~~~~~~~~~-------~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 307 (488)
........... ..++.+.+|+.+||+.||++|||++|+++|=
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hp 306 (318)
T d3blha1 246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 306 (318)
T ss_dssp STTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred ccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcCh
Confidence 00000000000 1235678999999999999999999999983
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.9e-47 Score=369.86 Aligned_cols=246 Identities=17% Similarity=0.206 Sum_probs=197.9
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceec--CCeeeE
Q 011349 52 GFCADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCE--GEERLL 127 (488)
Q Consensus 52 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~l 127 (488)
+.+.|.++++||+|+||+||+|+. .+|+.||||+++.. ..+.+.+|+.+|+.++ ||||+++++++.. ....++
T Consensus 33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~ 109 (328)
T d3bqca1 33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 109 (328)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence 345689999999999999999995 67999999999753 3578999999999995 9999999999874 356899
Q ss_pred EEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCC-CCeeccCCCcccCCCC
Q 011349 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDG-NPRLSCFGLMKNSRDG 206 (488)
Q Consensus 128 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~ 206 (488)
||||+.+++|.... +.+++..+..++.||+.||.|||++| |+||||||+|||++.++ .+||+|||+++.....
T Consensus 110 v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~ 183 (328)
T d3bqca1 110 VFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 183 (328)
T ss_dssp EEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred EEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceeccCC
Confidence 99999999998764 35999999999999999999999999 99999999999998655 5899999999866543
Q ss_pred ---CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhh------------------hc-----
Q 011349 207 ---KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI------------------RG----- 259 (488)
Q Consensus 207 ---~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~------------------~~----- 259 (488)
....+|+.|+|||.+.+. .++.++||||+||+++||++|+.||........ ..
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 263 (328)
T d3bqca1 184 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 263 (328)
T ss_dssp CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccccc
Confidence 355789999999998775 479999999999999999999998754311100 00
Q ss_pred -cccccc--------cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 260 -KNFLML--------MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 260 -~~~~~~--------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
...... .............++++.+||.+||..||.+|||++++++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp CGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000000 01111112223456789999999999999999999999986
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-47 Score=362.70 Aligned_cols=250 Identities=18% Similarity=0.189 Sum_probs=203.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecCCeeeEEEe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAE 130 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 130 (488)
..|+++++||+|+||+||+|+. .+|+.||||+++..... ....+.+|+.+|+.++||||+++++++.+....++||+
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 3578999999999999999994 57899999999765432 25689999999999999999999999999999999999
Q ss_pred cCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCCC---
Q 011349 131 FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK--- 207 (488)
Q Consensus 131 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 207 (488)
++.|++|..++. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.++......
T Consensus 82 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~ 158 (292)
T d1unla_ 82 FCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred eccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence 999999888776 5677999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -ccccccCCCCccccccCC-cccCCceEeehHHHHHHhhCCCCCCcchh-hhh-h------cc----c---cccc-----
Q 011349 208 -SYSTNLAFTPPEYLRTGR-VIPESVVYSFGTLLLDLLSGKHIPPSHAL-DLI-R------GK----N---FLML----- 265 (488)
Q Consensus 208 -~~~~t~~y~aPE~~~~~~-~~~~sDv~slG~il~el~tg~~p~~~~~~-~~~-~------~~----~---~~~~----- 265 (488)
...+++.|+|||.+.+.. ++.++|||||||++|||++|+.||..... ... . .. . ....
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T d1unla_ 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence 345678899999987654 68999999999999999999988643211 100 0 00 0 0000
Q ss_pred ----cccccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 266 ----MDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 266 ----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.............++.+.+|+.+||+.||.+|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00001112233456789999999999999999999999987
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.3e-47 Score=364.36 Aligned_cols=255 Identities=15% Similarity=0.129 Sum_probs=205.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCC-CCCcccccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS-ERLVNLIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~ 132 (488)
.|.++++||+|+||+||+|+. .+|+.||||+++... +...+.+|++.+..++| +|++.+++++..+...++||||+
T Consensus 6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 468899999999999999994 578999999986543 34568899999999965 89999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecC-----CCCCeeccCCCcccCCC--
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ-----DGNPRLSCFGLMKNSRD-- 205 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~-----~~~~kl~Dfgla~~~~~-- 205 (488)
+++|.+++.. ....+++.++..++.|++.||.|||+.| |+||||||+|||++. ++.+||+|||+++....
T Consensus 84 -~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (293)
T d1csna_ 84 -GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160 (293)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence 6899998864 4557999999999999999999999999 999999999999974 57899999999986432
Q ss_pred ---------CCccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhh--hccccccccccccCCCC
Q 011349 206 ---------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLI--RGKNFLMLMDSCLEGHF 274 (488)
Q Consensus 206 ---------~~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~ 274 (488)
.....||+.|||||++.+..+++++|||||||++|||+||+.||.+...... .................
T Consensus 161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (293)
T d1csna_ 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240 (293)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh
Confidence 2245789999999999999999999999999999999999999864321110 00000000000001112
Q ss_pred ChhhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhccc
Q 011349 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEA 314 (488)
Q Consensus 275 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 314 (488)
+..+|+++.+++..|+..+|++||+++.+.+.|+.+..+.
T Consensus 241 ~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~ 280 (293)
T d1csna_ 241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 280 (293)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence 2345678999999999999999999999999988876544
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.2e-47 Score=366.39 Aligned_cols=254 Identities=15% Similarity=0.130 Sum_probs=198.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCcc-cccceecCCeeeEEEecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVN-LIGCCCEGEERLLVAEFM 132 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~~ 132 (488)
.|.+++.||+|+||.||+|++ .+|+.||||++.... ...++..|+++++.++|+|++. +.+++.+++..++||||+
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~ 85 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 85 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence 478899999999999999994 568999999987654 2346889999999998776554 555567778899999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeec---CCCCCeeccCCCcccCCCC---
Q 011349 133 PNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD---QDGNPRLSCFGLMKNSRDG--- 206 (488)
Q Consensus 133 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~--- 206 (488)
+++|.+.+.. ....+++..+..++.|++.||.|||+++ ||||||||+|||++ .+..+||+|||+++.....
T Consensus 86 -~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 86 -GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred -CCchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 4677766644 4567999999999999999999999999 99999999999875 4567999999999865432
Q ss_pred --------CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc--cccccccccCCCCCh
Q 011349 207 --------KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--FLMLMDSCLEGHFSN 276 (488)
Q Consensus 207 --------~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 276 (488)
....||+.|||||.+.+..+++++|||||||++|||+||+.||............ ...............
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTT
T ss_pred cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhcc
Confidence 2446899999999999999999999999999999999999988654221111000 000000000011223
Q ss_pred hhHHHHHHHHHHhccCCCCCCCCHHHHHHHhchhhcc
Q 011349 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313 (488)
Q Consensus 277 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 313 (488)
.+|+++.+++.+||+.+|++||++.++.+.|+.+...
T Consensus 243 ~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~ 279 (299)
T d1ckia_ 243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279 (299)
T ss_dssp TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence 4568899999999999999999999998888876543
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-48 Score=372.11 Aligned_cols=248 Identities=18% Similarity=0.215 Sum_probs=202.5
Q ss_pred CcccccccCCCCCCceEEEEEe----CCCcEEEEEEccCCC----CCChHHHHHHHHHHhhcCC-CCCcccccceecCCe
Q 011349 54 CADNIVSEHGEKAPNVVYKGLV----DEDRWIAVKRFNRSA----WPDSRQFLEEARAVGLLRS-ERLVNLIGCCCEGEE 124 (488)
Q Consensus 54 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~ 124 (488)
+.|.+++.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|+++|++++| |||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 4578999999999999999984 247899999987542 1235678899999999976 899999999999999
Q ss_pred eeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCC
Q 011349 125 RLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSR 204 (488)
Q Consensus 125 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 204 (488)
.++||||+.||+|.+++. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~~v~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~ 180 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 180 (322)
T ss_dssp EEEEECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred eeeeeecccccHHHHHHH--hcccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhhc
Confidence 999999999999999997 4456889999999999999999999999 9999999999999999999999999997654
Q ss_pred CC-----CccccccCCCCccccccC--CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccccccccccCCCCChh
Q 011349 205 DG-----KSYSTNLAFTPPEYLRTG--RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSND 277 (488)
Q Consensus 205 ~~-----~~~~~t~~y~aPE~~~~~--~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (488)
.. ....|++.|++||.+.+. .++.++|||||||+||||+||+.||................. .....++..
T Consensus 181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~--~~~~~~~~~ 258 (322)
T d1vzoa_ 181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQE 258 (322)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH--HCCCCCCTT
T ss_pred ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcc--cCCCCCccc
Confidence 32 345789999999999764 467899999999999999999999865422111111111111 112234556
Q ss_pred hHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 011349 278 DGTELVRLASRCLQYEPRERP-----NAKSLVAS 306 (488)
Q Consensus 278 ~~~~l~~li~~cl~~dp~~Rp-----s~~~il~~ 306 (488)
.++++.+|+.+||++||.+|| |++|+++|
T Consensus 259 ~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 259 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence 788999999999999999999 48999886
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-46 Score=365.66 Aligned_cols=246 Identities=16% Similarity=0.198 Sum_probs=188.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCC--hHHHHHHHHHHhhcCCCCCcccccceec------CCee
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPD--SRQFLEEARAVGLLRSERLVNLIGCCCE------GEER 125 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~ 125 (488)
.|+++++||+|+||+||+|.. .+|+.||||+++...... ...+.+|+.+|++++|||||+++++|.. ...+
T Consensus 18 ~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~ 97 (355)
T d2b1pa1 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 97 (355)
T ss_dssp TEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred CeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCcee
Confidence 578999999999999999995 469999999997654322 3468899999999999999999999864 3578
Q ss_pred eEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCC
Q 011349 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205 (488)
Q Consensus 126 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 205 (488)
|+||||+.++.+ +.+. ..+++..+..++.||+.||.|||+.| |+||||||+|||++.++.+|++|||+++....
T Consensus 98 ~iv~Ey~~~~l~-~~~~----~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~ 171 (355)
T d2b1pa1 98 YLVMELMDANLC-QVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_dssp EEEEECCSEEHH-HHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEEeccchHHH-Hhhh----cCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhcccc
Confidence 999999976544 4442 35899999999999999999999999 99999999999999999999999999876544
Q ss_pred C---CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccc---------------------
Q 011349 206 G---KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN--------------------- 261 (488)
Q Consensus 206 ~---~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~--------------------- 261 (488)
. ....+|+.|+|||++.+..+++++||||+||+++||++|+.||.+..........
T Consensus 172 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 251 (355)
T d2b1pa1 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251 (355)
T ss_dssp ---------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHH
T ss_pred ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHH
Confidence 3 3457899999999999999999999999999999999999988654211110000
Q ss_pred ------------cccccccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 262 ------------FLMLMDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 262 ------------~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
............ .....++++.+|+.+||..||++|||++|+++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000000000000 112356789999999999999999999999988
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-46 Score=367.14 Aligned_cols=248 Identities=16% Similarity=0.194 Sum_probs=194.2
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEccCCCCC--ChHHHHHHHHHHhhcCCCCCcccccceecC-----Ceee
Q 011349 55 ADNIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWP--DSRQFLEEARAVGLLRSERLVNLIGCCCEG-----EERL 126 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 126 (488)
.|+++++||+|+||+||+|+ ..+|+.||||+++..... ..+.+.+|+.+|++++|||||++++++... ...+
T Consensus 19 rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~ 98 (348)
T d2gfsa1 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 98 (348)
T ss_dssp TEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCC
T ss_pred CeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceE
Confidence 57899999999999999999 467999999999865432 234688999999999999999999998643 3456
Q ss_pred EEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCCCcccCCCC
Q 011349 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG 206 (488)
Q Consensus 127 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 206 (488)
+||+|+.||+|.+++. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.++.+|++|||++......
T Consensus 99 ~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~ 174 (348)
T d2gfsa1 99 YLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174 (348)
T ss_dssp EEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CCTGG
T ss_pred EEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhcccCcc
Confidence 6777888999999984 456999999999999999999999999 999999999999999999999999998765433
Q ss_pred -CccccccCCCCccccccC-CcccCCceEeehHHHHHHhhCCCCCCcchhhhhhccccc---------------------
Q 011349 207 -KSYSTNLAFTPPEYLRTG-RVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFL--------------------- 263 (488)
Q Consensus 207 -~~~~~t~~y~aPE~~~~~-~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--------------------- 263 (488)
....||+.|+|||.+.+. .++.++|||||||++|+|++|+.||.+............
T Consensus 175 ~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 254 (348)
T d2gfsa1 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 254 (348)
T ss_dssp GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHH
T ss_pred cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhh
Confidence 356789999999987765 468899999999999999999999875422111000000
Q ss_pred -cccccccCCC---CChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 264 -MLMDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 264 -~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
.......... .....++++.+||.+||..||.+|||+.|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 255 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp HTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 0000000000 011345778999999999999999999999987
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.3e-41 Score=329.83 Aligned_cols=250 Identities=16% Similarity=0.194 Sum_probs=189.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-----------CCCCcccccceecC
Q 011349 55 ADNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-----------SERLVNLIGCCCEG 122 (488)
Q Consensus 55 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~~~ 122 (488)
.|.++++||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+.+++.++ |+||+++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 489999999999999999994 679999999997653 22457888999998885 47899999888653
Q ss_pred --CeeeEEEecCCCCC-hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCceeecCCCC------C
Q 011349 123 --EERLLVAEFMPNET-LSKHLFHWENQPMKWAMRVRVALYLAQALDYCSS-KGRALYHDLNTYRILFDQDGN------P 192 (488)
Q Consensus 123 --~~~~lv~e~~~~gs-L~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~iiH~Dlkp~Nill~~~~~------~ 192 (488)
...+++|+++..+. ............+++..+..++.||+.||.|||+ .| |+||||||+|||++.++. +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~~~ 171 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQI 171 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCccccccee
Confidence 34566666654443 3333333456779999999999999999999998 77 999999999999986553 8
Q ss_pred eeccCCCcccCCCC-CccccccCCCCccccccCCcccCCceEeehHHHHHHhhCCCCCCcchhhhhh-------------
Q 011349 193 RLSCFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIR------------- 258 (488)
Q Consensus 193 kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~slG~il~el~tg~~p~~~~~~~~~~------------- 258 (488)
+++|||.+...... ....||+.|+|||++.+..++.++||||+||++++|++|+.||.........
T Consensus 172 kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~l 251 (362)
T d1q8ya_ 172 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 251 (362)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred eEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHh
Confidence 99999998865443 4567899999999999999999999999999999999999987543110000
Q ss_pred c---------cc----------ccccccc----------ccCCCCChhhHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 011349 259 G---------KN----------FLMLMDS----------CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVAS 306 (488)
Q Consensus 259 ~---------~~----------~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 306 (488)
+ .. ....+.. ......+...++++.+|+.+||..||.+|||++|+|+|
T Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 252 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 00 0000000 00123345667899999999999999999999999987
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.92 E-value=5.6e-26 Score=200.57 Aligned_cols=163 Identities=15% Similarity=0.116 Sum_probs=120.8
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCC-----C-------------hHHHHHHHHHHhhcCCCCCcccccc
Q 011349 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWP-----D-------------SRQFLEEARAVGLLRSERLVNLIGC 118 (488)
Q Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----~-------------~~~~~~E~~~l~~l~h~niv~~~~~ 118 (488)
.+.++||+|+||+||+|...+|+.||||+++..... . ...+.+|+..+.++.|.+++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 466789999999999999889999999987643211 0 1234578899999999999988765
Q ss_pred eecCCeeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCceeecCCCCCeeccCC
Q 011349 119 CCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198 (488)
Q Consensus 119 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 198 (488)
. ..++||||+++..+.+ ++......++.|++.+|.|||+.+ |+||||||+|||+++++ ++|+|||
T Consensus 83 ~----~~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~~-~~liDFG 147 (191)
T d1zara2 83 E----GNAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEEG-IWIIDFP 147 (191)
T ss_dssp E----TTEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETTE-EEECCCT
T ss_pred c----CCEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCCC-EEEEECC
Confidence 3 2379999998765543 334456789999999999999999 99999999999999654 8999999
Q ss_pred CcccCCCCCccccccCCCC------ccccccCCcccCCceEeehHHH
Q 011349 199 LMKNSRDGKSYSTNLAFTP------PEYLRTGRVIPESVVYSFGTLL 239 (488)
Q Consensus 199 la~~~~~~~~~~~t~~y~a------PE~~~~~~~~~~sDv~slG~il 239 (488)
+|......... .|.. .+.+ .+.++.++|+||+.--+
T Consensus 148 ~a~~~~~~~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 148 QSVEVGEEGWR----EILERDVRNIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp TCEETTSTTHH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred CcccCCCCCcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence 99765433211 1111 1122 25678899999975443
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=1.4e-20 Score=151.36 Aligned_cols=104 Identities=24% Similarity=0.384 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
.+..++++|+.++..|+|++|+..|+++|+.+|+ ++.+|+++|.+|.++|++++|+.+|+++++++|+++.+|+++|.+
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 80 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 80 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+..+|++++|+.+|++|++++|+++
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~p~~~ 105 (117)
T d1elwa_ 81 LEFLNRFEEAKRTYEEGLKHEANNP 105 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999864
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=5.1e-20 Score=162.92 Aligned_cols=104 Identities=21% Similarity=0.431 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
+++.++++|+.+++.|+|++|+..|++||+++|+ ++.+|+++|.||.++|+|++|+.+|++|++++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|..+|++++|+.+|++|++++|+..
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~ 106 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQR 106 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccH
Confidence 9999999999999999999999754
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=2.7e-19 Score=152.30 Aligned_cols=107 Identities=23% Similarity=0.380 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQ 458 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 458 (488)
..+.+..++++|+.+++.|+|++|+..|++|++++|+ ++.+|+++|.||+.+|++++|+.+|++||+++|+++.+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 3467889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 459 AAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 459 g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|.++..+|++++|+++|+++++++|++.
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~~ 112 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHDK 112 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999999999864
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.77 E-value=1.4e-18 Score=146.69 Aligned_cols=111 Identities=19% Similarity=0.235 Sum_probs=101.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---------------hHHHhcHHHHHHhhCCHHHHHHH
Q 011349 376 WTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---------------PTVFARRCLCYLLSDMPQEALGD 440 (488)
Q Consensus 376 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~ 440 (488)
..++++.+..++++|+.+|+.|+|++|+..|++||+.-+... ..+|+|+|.||.++|++++|+.+
T Consensus 10 ~~e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~ 89 (153)
T d2fbna1 10 DEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDH 89 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhh
Confidence 346778899999999999999999999999999997665411 24789999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 441 AMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 441 ~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
|++||+++|++.++|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 90 ~~~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 135 (153)
T d2fbna1 90 ASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 135 (153)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred hhccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999999864
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=2.6e-18 Score=147.68 Aligned_cols=110 Identities=13% Similarity=0.158 Sum_probs=101.8
Q ss_pred hhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc--------------hHHHhcHHHHHHhhCCHHHHHHHHH
Q 011349 377 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS--------------PTVFARRCLCYLLSDMPQEALGDAM 442 (488)
Q Consensus 377 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~--------------~~~~~~~a~~~~~~~~~~~A~~~~~ 442 (488)
.++++.+..++++|+.+|+.|+|++|+..|++||+..|... ..+|.|+|.||+++|+|++|+.+++
T Consensus 7 ~ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~ 86 (170)
T d1p5qa1 7 EEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 86 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhh
Confidence 45677899999999999999999999999999998877522 2568899999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 443 QAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 443 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+||+++|+++.+|+++|.+|+.+|++++|+.+|++|++++|++.
T Consensus 87 ~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~ 130 (170)
T d1p5qa1 87 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 130 (170)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred hhhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999999864
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.74 E-value=7.6e-18 Score=144.46 Aligned_cols=110 Identities=14% Similarity=0.209 Sum_probs=100.1
Q ss_pred hhhHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC--------------chHHHhcHHHHHHhhCCHHHHHHHHH
Q 011349 377 TDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV--------------SPTVFARRCLCYLLSDMPQEALGDAM 442 (488)
Q Consensus 377 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~~ 442 (488)
.++.+.+..++++|+.+++.|+|++|+..|++||..-|.. ...+|.|+|.||.++|+|++|+.+++
T Consensus 9 ~E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~ 88 (168)
T d1kt1a1 9 KEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 88 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhh
Confidence 4566789999999999999999999999999999654331 12468899999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 443 QAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 443 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++++++|++..+|+++|.+|..+|++++|+++|++|++++|+++
T Consensus 89 ~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~ 132 (168)
T d1kt1a1 89 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 132 (168)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH
T ss_pred hhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999999864
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=1.4e-17 Score=135.92 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCH-------H
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWP-------T 453 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~-------~ 453 (488)
+.|..++++|+.++..|+|++|+.+|+++|+++|+ ++.++.++|.||.++|+|++|+.+|++||+++|++. .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 46788999999999999999999999999999999 999999999999999999999999999999999885 4
Q ss_pred HHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 454 AFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 454 a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+|+++|.++..++++++|+++|++++.++|+
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 111 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 7778889999999999999999999988765
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.70 E-value=2.5e-17 Score=141.33 Aligned_cols=106 Identities=21% Similarity=0.282 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhc----------------cCCCCchHHHhcHHHHHHhhCCHHHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFID----------------GGTMVSPTVFARRCLCYLLSDMPQEALGDAMQ 443 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 443 (488)
.+.+..+...|+.++..|+|++|+..|++||+ ++|. ...+|.|+|.||.++|+|++|+.+|++
T Consensus 24 ~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~~~~~ 102 (169)
T d1ihga1 24 LLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSCLE 102 (169)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhhhhhh
Confidence 34566788999999999999999999999985 3455 667899999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 444 AQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 444 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
||+++|+++++|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 103 al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~ 145 (169)
T d1ihga1 103 ALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 145 (169)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999864
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=1.4e-16 Score=146.10 Aligned_cols=104 Identities=14% Similarity=0.014 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..++.+|.++++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 35 ~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 113 (259)
T d1xnfa_ 35 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGI 113 (259)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHHH
Confidence 56789999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+|++++|++.|+++++++|+.
T Consensus 114 ~~~~~g~~~~A~~~~~~al~~~p~~ 138 (259)
T d1xnfa_ 114 ALYYGGRDKLAQDDLLAFYQDDPND 138 (259)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhhHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999999974
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.67 E-value=1.1e-16 Score=127.12 Aligned_cols=95 Identities=12% Similarity=0.031 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 463 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 463 (488)
..+++.|..+++.|++++|+..|+++++.+|+ ++.+|.++|.++..+|++++|+.+|++|++++|+++.+|+.+|.+|.
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y~ 95 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 95 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHHH
Confidence 45678999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhh
Q 011349 464 GLGMNNDAQETLKDGT 479 (488)
Q Consensus 464 ~~~~~~~A~~~~~~al 479 (488)
.+|++++|++.|+++|
T Consensus 96 ~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 96 NEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHh
Confidence 9999999999999986
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=6.4e-16 Score=135.21 Aligned_cols=101 Identities=13% Similarity=0.092 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..++++|..++..|+|++|++.|+++ .|. ++.+|+|+|.+|..+|+|++|+++|++||+++|+++.+|+++|.
T Consensus 3 ~~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~ 78 (192)
T d1hh8a_ 3 VEAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 78 (192)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 35667889999999999999999999975 445 67789999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhcccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
++..+|++++|+++|++|++..|.+
T Consensus 79 ~~~~~g~~~~A~~~~~kAl~~~~~n 103 (192)
T d1hh8a_ 79 LYYQTEKYDLAIKDLKEALIQLRGN 103 (192)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HHHhhccHHHHHHHHHHHHHhCccC
Confidence 9999999999999999999876643
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=1.8e-15 Score=132.37 Aligned_cols=103 Identities=16% Similarity=0.087 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----------
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---------- 451 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---------- 451 (488)
++..|+++|.+++..|+|++|++.|++||+++|+ .+.+|+++|.+|.++|+|++|+.+|++|++..|.+
T Consensus 35 ~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~ 113 (192)
T d1hh8a_ 35 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 113 (192)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhh
Confidence 4568999999999999999999999999999999 99999999999999999999999999999886654
Q ss_pred ------HHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 452 ------PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 452 ------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.++++++|.++..+|++++|++.|++|+++.|+.
T Consensus 114 ~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~ 153 (192)
T d1hh8a_ 114 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 153 (192)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred hcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 4789999999999999999999999999998874
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.59 E-value=1.5e-15 Score=128.24 Aligned_cols=108 Identities=18% Similarity=0.149 Sum_probs=94.2
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc-----------hHHHhcHHHHHHhhCCHHHHHHHHHHHHHh
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS-----------PTVFARRCLCYLLSDMPQEALGDAMQAQVI 447 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~al~l 447 (488)
++.++..+...|+.+++.|+|++|+..|++||+++|+.. +.+|+|+|.+|.++|+|++|+.++++++++
T Consensus 5 ~~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~ 84 (156)
T d2hr2a1 5 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 84 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhc
Confidence 345566777789999999999999999999999887621 367999999999999999999999999987
Q ss_pred CCC-----------CHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 448 SPD-----------WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 448 ~p~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.|. ...+|+++|.+|..+|++++|+++|++|+++.|+..
T Consensus 85 ~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~ 134 (156)
T d2hr2a1 85 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 134 (156)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence 542 355899999999999999999999999999988653
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=8.5e-16 Score=123.42 Aligned_cols=98 Identities=8% Similarity=0.017 Sum_probs=89.8
Q ss_pred HHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhC---CHHHHHHHHHHHHHhCCCC--HHHHHHHHHHH
Q 011349 388 KRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSD---MPQEALGDAMQAQVISPDW--PTAFYLQAAAL 462 (488)
Q Consensus 388 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~ 462 (488)
+.++.+...+++++|++.|++|+.++|+ ++.+++|+|.|+.+.+ ++++|+..++++++.+|.+ +++||++|.+|
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 5678889999999999999999999999 9999999999998754 5667999999999999866 56999999999
Q ss_pred HhCCChHHHHHHHHHhhccccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.+|++++|+++|+++|+++|++.
T Consensus 83 ~~~g~~~~A~~~~~~aL~~~P~~~ 106 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQTEPQNN 106 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhhhHHHHHHHHHHHHhCcCCH
Confidence 999999999999999999999864
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.54 E-value=1.1e-15 Score=127.15 Aligned_cols=96 Identities=15% Similarity=0.084 Sum_probs=86.5
Q ss_pred HHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhh----------CCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 390 GDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLS----------DMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 390 g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~----------~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
+..+-+.+.|++|+..|++|++++|+ ++.+++++|.++..+ +++++|+..|++|++++|+++.+|+++|
T Consensus 4 ~~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG 82 (145)
T d1zu2a1 4 ETEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIG 82 (145)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHH
Confidence 34556778899999999999999999 999999999999854 5568999999999999999999999999
Q ss_pred HHHHhCCC-----------hHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGM-----------NNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~-----------~~~A~~~~~~al~l~p~~~ 486 (488)
.+|..+|+ |++|+++|++|++++|++.
T Consensus 83 ~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~ 120 (145)
T d1zu2a1 83 NAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 120 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHH
Confidence 99988764 7999999999999999864
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=1.1e-14 Score=137.93 Aligned_cols=104 Identities=14% Similarity=0.199 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAA 461 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 461 (488)
++..+...|..+...|++++|+..|+++++.+|+ ++.+|.++|.+|..+|++++|++.|+++++++|+++.+|+++|.+
T Consensus 171 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 249 (323)
T d1fcha_ 171 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 249 (323)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHhhccccccc
Q 011349 462 LFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 462 ~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+..+|++++|++.|++|++++|+..
T Consensus 250 ~~~~g~~~~A~~~~~~al~l~p~~~ 274 (323)
T d1fcha_ 250 CINLGAHREAVEHFLEALNMQRKSR 274 (323)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC-
T ss_pred HHHCCCHHHHHHHHHHHHHhCCcCh
Confidence 9999999999999999999999854
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.5e-14 Score=136.78 Aligned_cols=104 Identities=9% Similarity=-0.012 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHhcC-ChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAK-DFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
++..+|+.+|.++...| ++++|+..|+++++++|+ +..+|+++|.++..+|++++|++++++|++++|++..+|+++|
T Consensus 75 ~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~~~ 153 (315)
T d2h6fa1 75 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQ 153 (315)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhcchHHHHHHH
Confidence 45566677777666654 467777777777777776 6677777777777777777777777777777777777777777
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.++..+|++++|+++|++|+++||.+
T Consensus 154 ~~~~~~~~~~~Al~~~~~al~~~p~n 179 (315)
T d2h6fa1 154 WVIQEFKLWDNELQYVDQLLKEDVRN 179 (315)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhhHHHHHHHHHHHHHCCcc
Confidence 77777777777777777777776653
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=3.9e-14 Score=133.87 Aligned_cols=105 Identities=13% Similarity=-0.054 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCC-HHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM-PQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
+-++++...|.++.+.+.+++|++.|++||+++|+ +..+|++||.++..+|+ +++|+.+++++++++|++..+|+++|
T Consensus 41 ~~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~ 119 (315)
T d2h6fa1 41 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 119 (315)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHh
Confidence 34567777899999999999999999999999999 99999999999999875 99999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhccccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.++..+|++++|++.|++|+++||++.
T Consensus 120 ~~~~~l~~~~eAl~~~~kal~~dp~n~ 146 (315)
T d2h6fa1 120 VLVEWLRDPSQELEFIADILNQDAKNY 146 (315)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHHHhhccHHHHHHHHhhhhhhhhcch
Confidence 999999999999999999999999863
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=8.7e-14 Score=106.33 Aligned_cols=83 Identities=11% Similarity=-0.031 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC------chHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV------SPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY 456 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 456 (488)
++.+++.|..+++.|+|++|+..|++|+++.|.. ...++.++|.+|.++|++++|+..|++||+++|++++|++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 5678999999999999999999999999875541 3578999999999999999999999999999999999999
Q ss_pred HHHHHHHhC
Q 011349 457 LQAAALFGL 465 (488)
Q Consensus 457 ~~g~~~~~~ 465 (488)
+++.+...+
T Consensus 85 Nl~~~~~~l 93 (95)
T d1tjca_ 85 NLKYFEYIM 93 (95)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 998876554
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=2.3e-13 Score=128.48 Aligned_cols=101 Identities=14% Similarity=0.118 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 463 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 463 (488)
..++++|..+++.|+|++|+..|+++|+.+|+ ++.+|.++|.+|..+|++++|+..|++|++++|+++.+|+++|.++.
T Consensus 20 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 98 (323)
T d1fcha_ 20 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFT 98 (323)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccccc
Confidence 34578999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHhhcccccc
Q 011349 464 GLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 464 ~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.+|++++|++.|+++++++|+.
T Consensus 99 ~~~~~~~A~~~~~~~~~~~~~~ 120 (323)
T d1fcha_ 99 NESLQRQACEILRDWLRYTPAY 120 (323)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTT
T ss_pred ccccccccccchhhHHHhccch
Confidence 9999999999999999999874
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=5.6e-13 Score=127.87 Aligned_cols=105 Identities=13% Similarity=0.034 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++.++...|..+...|++++|++.|++++...|. ...++..+|.++..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 269 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 347 (388)
T d1w3ba_ 269 HFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLAS 347 (388)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHHHhhccccccc
Q 011349 461 ALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 461 ~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++..+|++++|++.|++|++++|+..
T Consensus 348 ~~~~~g~~~~A~~~~~~al~l~P~~~ 373 (388)
T d1w3ba_ 348 VLQQQGKLQEALMHYKEAIRISPTFA 373 (388)
T ss_dssp HHHTTTCCHHHHHHHHHHHTTCTTCH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999864
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=5.7e-13 Score=127.83 Aligned_cols=98 Identities=12% Similarity=0.028 Sum_probs=94.3
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCC
Q 011349 387 KKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLG 466 (488)
Q Consensus 387 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 466 (488)
.+.|+.+++.|+|++|++.|+++++.+|+ ++.++..+|.+|..+|++++|+..|+++++++|+++.+|+.+|.++..+|
T Consensus 3 l~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g 81 (388)
T d1w3ba_ 3 MELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERG 81 (388)
T ss_dssp CTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhc
Confidence 46789999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhhcccccc
Q 011349 467 MNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 467 ~~~~A~~~~~~al~l~p~~ 485 (488)
++++|++.+.++++.+|..
T Consensus 82 ~~~~A~~~~~~~~~~~~~~ 100 (388)
T d1w3ba_ 82 QLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTC
T ss_pred ccccccccccccccccccc
Confidence 9999999999999988864
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.31 E-value=4.8e-12 Score=107.68 Aligned_cols=91 Identities=14% Similarity=0.101 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
..+..+.++|.++++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.
T Consensus 75 ~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~ 153 (169)
T d1ihga1 75 VALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLK 153 (169)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHH
Q 011349 461 ALFGLGMNNDAQ 472 (488)
Q Consensus 461 ~~~~~~~~~~A~ 472 (488)
+...+.++.++.
T Consensus 154 ~~~~l~~~~~~~ 165 (169)
T d1ihga1 154 VKQKIKAQKDKE 165 (169)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 988877776654
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=3.8e-12 Score=101.13 Aligned_cols=83 Identities=12% Similarity=-0.040 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++..|..+|.+++..|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++.++..++
T Consensus 34 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~ 112 (117)
T d1elwa_ 34 PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQ 112 (117)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred CcchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 366889999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred HHHH
Q 011349 460 AALF 463 (488)
Q Consensus 460 ~~~~ 463 (488)
.+..
T Consensus 113 ~l~~ 116 (117)
T d1elwa_ 113 NMEA 116 (117)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 8754
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.30 E-value=8.2e-12 Score=113.57 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC---------
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW--------- 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~--------- 451 (488)
+++.+|+.+|.++.+.|++++|+..|+++++++|+ ++.++.++|.+|..+|++++|+..++++++++|++
T Consensus 69 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 147 (259)
T d1xnfa_ 69 DMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYL 147 (259)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhh-hhhhHHHHHHHHHHHhhHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 56889999999999999999999999999999999 99999999999999999999999999999776653
Q ss_pred -------------------------------------------------------------HHHHHHHHHHHHhCCChHH
Q 011349 452 -------------------------------------------------------------PTAFYLQAAALFGLGMNND 470 (488)
Q Consensus 452 -------------------------------------------------------------~~a~~~~g~~~~~~~~~~~ 470 (488)
.++|+++|.++..+|++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~ 227 (259)
T d1xnfa_ 148 AEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDS 227 (259)
T ss_dssp HHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHhhhHHHHHHHHHHhhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHCCCHHH
Confidence 3345578999999999999
Q ss_pred HHHHHHHhhcccccc
Q 011349 471 AQETLKDGTNLEAKK 485 (488)
Q Consensus 471 A~~~~~~al~l~p~~ 485 (488)
|++.|++|++.+|++
T Consensus 228 A~~~~~~al~~~p~~ 242 (259)
T d1xnfa_ 228 ATALFKLAVANNVHN 242 (259)
T ss_dssp HHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHcCCCC
Confidence 999999999999974
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.27 E-value=3.1e-11 Score=103.25 Aligned_cols=103 Identities=10% Similarity=0.027 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCch----------------------HHHhcHHHHHHhhCCHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSP----------------------TVFARRCLCYLLSDMPQEAL 438 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------------~~~~~~a~~~~~~~~~~~A~ 438 (488)
....++.+.|..+...|++++|++.|.+|+.+.+. .. .++.+++.++..+|++++|+
T Consensus 9 ~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG-~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al 87 (179)
T d2ff4a2 9 GRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRG-PVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 87 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS-STTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH
Confidence 44678899999999999999999999999998765 32 46788999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHh-------hccccc
Q 011349 439 GDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDG-------TNLEAK 484 (488)
Q Consensus 439 ~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a-------l~l~p~ 484 (488)
.+++++++++|.+..+|..++.+|..+|++.+|+..|+++ +.++|.
T Consensus 88 ~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~ 140 (179)
T d2ff4a2 88 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 140 (179)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 9999999999999999999999999999999999999998 556664
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=1e-11 Score=105.69 Aligned_cols=89 Identities=13% Similarity=0.053 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALF 463 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 463 (488)
..+.++|.++++.|+|++|+..+++||+++|+ ++.+++++|.||..+|+|++|+.+|++|++++|+++.+...++.++.
T Consensus 63 ~~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 141 (170)
T d1p5qa1 63 ASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQ 141 (170)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 46778999999999999999999999999999 99999999999999999999999999999999999999999999998
Q ss_pred hCCChHHHHH
Q 011349 464 GLGMNNDAQE 473 (488)
Q Consensus 464 ~~~~~~~A~~ 473 (488)
.+++..+...
T Consensus 142 ~~~~~~~~e~ 151 (170)
T d1p5qa1 142 RIRRQLAREK 151 (170)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8877776543
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.25 E-value=1.4e-11 Score=104.54 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
+..+.++|.+++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|+|++|+.+|+++++++|+++.++..++.+.
T Consensus 64 ~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 142 (168)
T d1kt1a1 64 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQ 142 (168)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHH-HHHHHHh
Q 011349 463 FGLGMNNDA-QETLKDG 478 (488)
Q Consensus 463 ~~~~~~~~A-~~~~~~a 478 (488)
..++++.+. .+.|.+.
T Consensus 143 ~~~~~~~e~~kk~~~~~ 159 (168)
T d1kt1a1 143 KKAKEHNERDRRTYANM 159 (168)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHH
Confidence 888776553 3444433
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=1.8e-11 Score=102.94 Aligned_cols=96 Identities=15% Similarity=-0.011 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
..++..|..+|.+++..|++++|+..|++||+++|+ +..+|.++|.+|..+|++++|+.+++++++++|+++.++..++
T Consensus 41 p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~ 119 (159)
T d1a17a_ 41 PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQ 119 (159)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 367889999999999999999999999999999999 9999999999999999999999999999999999999998887
Q ss_pred HHH--HhCCChHHHHHHHH
Q 011349 460 AAL--FGLGMNNDAQETLK 476 (488)
Q Consensus 460 ~~~--~~~~~~~~A~~~~~ 476 (488)
.+. ...+.+++|+....
T Consensus 120 ~~~~~~~~~~~~~a~~~~~ 138 (159)
T d1a17a_ 120 ECNKIVKQKAFERAIAGDE 138 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcH
Confidence 765 44455777765433
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.21 E-value=1.4e-11 Score=102.77 Aligned_cols=83 Identities=12% Similarity=0.085 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
...+.++|.++++.|+|++|++.|++||+++|+ +..+|+++|.+|..+|++++|+.+|+++++++|++..+...++.+.
T Consensus 67 ~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 145 (153)
T d2fbna1 67 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 145 (153)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 346788999999999999999999999999999 9999999999999999999999999999999999999999998887
Q ss_pred HhCC
Q 011349 463 FGLG 466 (488)
Q Consensus 463 ~~~~ 466 (488)
.+++
T Consensus 146 ~kl~ 149 (153)
T d2fbna1 146 NKLK 149 (153)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=8.3e-11 Score=94.79 Aligned_cols=70 Identities=17% Similarity=0.029 Sum_probs=65.8
Q ss_pred hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccccC
Q 011349 418 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHR 487 (488)
Q Consensus 418 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~~ 487 (488)
+..+-++|.+++..|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+++|++|++++|+...
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~ 73 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENRE 73 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHH
Confidence 4567789999999999999999999999999999999999999999999999999999999999998643
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=9.9e-11 Score=88.87 Aligned_cols=69 Identities=10% Similarity=-0.157 Sum_probs=62.8
Q ss_pred hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 418 PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW-------PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 418 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~-------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
+.-++++|.++.+.|+|++|+..|++|+++.|.+ +++++++|.+++++|++++|++.|++||+++|+..
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~ 80 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCH
Confidence 3456789999999999999999999999987654 68899999999999999999999999999999864
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.08 E-value=2.4e-11 Score=105.94 Aligned_cols=90 Identities=10% Similarity=0.024 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAA 460 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 460 (488)
.++..|..+|.++++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|+|++|+.+|++|++++|++...+...+.
T Consensus 36 ~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~-~~~a~~~lg~~~~~l~~~~~A~~~~~~al~l~p~~~~~~~~~~~ 114 (201)
T d2c2la1 36 LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIP 114 (201)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHH
T ss_pred CCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 56889999999999999999999999999999999 99999999999999999999999999999999976655444444
Q ss_pred HHHhCCChHHH
Q 011349 461 ALFGLGMNNDA 471 (488)
Q Consensus 461 ~~~~~~~~~~A 471 (488)
.+...++...+
T Consensus 115 ~~l~~~~~~~~ 125 (201)
T d2c2la1 115 SALRIAKKKRW 125 (201)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhHH
Confidence 44443333333
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.08 E-value=1.1e-10 Score=91.75 Aligned_cols=68 Identities=15% Similarity=-0.056 Sum_probs=64.5
Q ss_pred HHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 419 TVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 419 ~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
..++++|.++.+.|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|+..
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 84 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI 84 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccc
Confidence 34678999999999999999999999999999999999999999999999999999999999999864
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.05 E-value=7.9e-11 Score=97.12 Aligned_cols=91 Identities=12% Similarity=-0.063 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHhc----------CChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCC-----------HHHHH
Q 011349 380 IQETLNSKKRGDAAFRA----------KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM-----------PQEAL 438 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~----------~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-----------~~~A~ 438 (488)
.+++.+++..|.++... +++++|+..|++||+++|+ ++.+|+++|.+|..+|+ |++|+
T Consensus 28 P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~ 106 (145)
T d1zu2a1 28 PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLAT 106 (145)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhHHHhh
Confidence 46788999999998854 5568999999999999999 99999999999988764 79999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHH
Q 011349 439 GDAMQAQVISPDWPTAFYLQAAALFGLGMNNDA 471 (488)
Q Consensus 439 ~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A 471 (488)
++|++|++++|++..++..++.+....+.+.++
T Consensus 107 ~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 107 QFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred hhhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987665555554
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=1e-10 Score=93.09 Aligned_cols=84 Identities=11% Similarity=-0.042 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHh---cCChHHHHHHHHHhhccCCCCc--hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHH
Q 011349 381 QETLNSKKRGDAAFR---AKDFPTAIECYTHFIDGGTMVS--PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAF 455 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~---~~~~~~A~~~~~~ai~~~p~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 455 (488)
.++.++++.|.++++ .+++++|+..|+++++.+|. + ..+++++|.+|.++|+|++|+++|+++++++|++.+|.
T Consensus 31 ~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~-~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A~ 109 (122)
T d1nzna_ 31 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK-EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAK 109 (122)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHHH
Confidence 567899999999986 45667899999999999986 4 45899999999999999999999999999999999999
Q ss_pred HHHHHHHHhC
Q 011349 456 YLQAAALFGL 465 (488)
Q Consensus 456 ~~~g~~~~~~ 465 (488)
..++.+..++
T Consensus 110 ~l~~~I~~~~ 119 (122)
T d1nzna_ 110 ELERLIDKAM 119 (122)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998877654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=3.2e-10 Score=113.41 Aligned_cols=103 Identities=7% Similarity=-0.104 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+.+..+...|..+.+.|++++|+..|.++++.+|. .++.++|.++...|+|++|+.+|.+|++++|+++.+|+++|
T Consensus 117 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg 193 (497)
T d1ya0a1 117 LPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLA 193 (497)
T ss_dssp --------------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHH
T ss_pred hhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 356678889999999999999999999999987764 46778999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHhhcccccc
Q 011349 460 AALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 460 ~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
.++...|++.+|+.+|.+|+.++|..
T Consensus 194 ~~~~~~~~~~~A~~~y~ral~~~~~~ 219 (497)
T d1ya0a1 194 ILASSKGDHLTTIFYYCRSIAVKFPF 219 (497)
T ss_dssp HHHHHTTCHHHHHHHHHHHHSSSBCC
T ss_pred HHHHHcCCHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999988853
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.89 E-value=1.2e-09 Score=101.01 Aligned_cols=104 Identities=11% Similarity=-0.004 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccC-----CCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC----
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGG-----TMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW---- 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-----p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~---- 451 (488)
+.+..|.+.|+.+...|+|++|+++|.+|+++. +.....+|.+.|.||.++|++++|++.|++++++.++.
T Consensus 35 ~Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~ 114 (290)
T d1qqea_ 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFR 114 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccch
Confidence 446678888999999999999999999999862 22245689999999999999999999999999987766
Q ss_pred --HHHHHHHHHHHHh-CCChHHHHHHHHHhhccccc
Q 011349 452 --PTAFYLQAAALFG-LGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 452 --~~a~~~~g~~~~~-~~~~~~A~~~~~~al~l~p~ 484 (488)
..++.++|.++.. +|++++|++.|++|+++.+.
T Consensus 115 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~ 150 (290)
T d1qqea_ 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ 150 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 6788999998865 79999999999999988664
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.85 E-value=4.2e-09 Score=95.44 Aligned_cols=96 Identities=11% Similarity=0.026 Sum_probs=80.2
Q ss_pred HHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHH------------
Q 011349 389 RGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFY------------ 456 (488)
Q Consensus 389 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~------------ 456 (488)
++..+++.|++++|+..|+++|+.+|+ +..++.+++.+|...|++++|++.++++++++|++..++.
T Consensus 2 q~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~ 80 (264)
T d1zbpa1 2 QWKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 80 (264)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Confidence 456788999999999999999999999 9999999999999999999999999999999888766554
Q ss_pred -----------------------HHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 457 -----------------------LQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 457 -----------------------~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
..+.++...|++++|.+.++++.++.|+.
T Consensus 81 ~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~ 132 (264)
T d1zbpa1 81 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEK 132 (264)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCC
Confidence 44555566677778888888877777764
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.84 E-value=5.5e-09 Score=98.49 Aligned_cols=103 Identities=14% Similarity=0.023 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHhcC--ChHHHHHHHHHhhccCCCCchHH-HhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 381 QETLNSKKRGDAAFRAK--DFPTAIECYTHFIDGGTMVSPTV-FARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~-~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
++...|+.+|..+...+ ++++|+..++++++++|. ...+ +..+|.++...+++++|+..++++++++|++..+|++
T Consensus 105 k~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~~a~~~ 183 (334)
T d1dcea1 105 KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHY 183 (334)
T ss_dssp TCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHH
T ss_pred CcHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCch-hhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCHHHHHH
Confidence 44566666666665554 367777777777777776 4443 3456666777777777777777777777777777777
Q ss_pred HHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 458 QAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 458 ~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
+|.++..+|++++|+..+++++++.|+
T Consensus 184 l~~~~~~~~~~~~A~~~~~~~~~~~~~ 210 (334)
T d1dcea1 184 RSCLLPQLHPQPDSGPQGRLPENVLLK 210 (334)
T ss_dssp HHHHHHHHSCCCCSSSCCSSCHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHhHHhHHH
Confidence 777777777777777777776666654
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.81 E-value=5.2e-09 Score=96.68 Aligned_cols=106 Identities=8% Similarity=-0.189 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCC-----chHHHhcHHHHHHh-hCCHHHHHHHHHHHHHhCCC---
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMV-----SPTVFARRCLCYLL-SDMPQEALGDAMQAQVISPD--- 450 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~l~p~--- 450 (488)
...+..|.+.|.++.+.|++++|++.|++++++.+.. ...++.++|.+|.. +|++++|++.|++|+++.+.
T Consensus 74 ~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~ 153 (290)
T d1qqea_ 74 DEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS 153 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3457889999999999999999999999999875541 15678888888855 69999999999999988543
Q ss_pred ---CHHHHHHHHHHHHhCCChHHHHHHHHHhhcccccc
Q 011349 451 ---WPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 485 (488)
Q Consensus 451 ---~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~ 485 (488)
...++.++|.++..+|+|++|++.|+++++..|..
T Consensus 154 ~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~ 191 (290)
T d1qqea_ 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred hhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccc
Confidence 35679999999999999999999999999988764
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.78 E-value=2e-08 Score=94.46 Aligned_cols=107 Identities=7% Similarity=-0.102 Sum_probs=93.9
Q ss_pred hHHHHHHHHHHHHHHHhcCC----------hHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCC--HHHHHHHHHHHHH
Q 011349 379 QIQETLNSKKRGDAAFRAKD----------FPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDM--PQEALGDAMQAQV 446 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~al~ 446 (488)
..+...+|..++......++ +++|+.+|+++++.+|+ ++.+|+++|.++..+++ +++|+..+.++++
T Consensus 59 ~P~~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~ 137 (334)
T d1dcea1 59 NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLE 137 (334)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHh
Confidence 34667788888888776554 78999999999999999 99999999999888875 8999999999999
Q ss_pred hCCCCHHHH-HHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 447 ISPDWPTAF-YLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 447 l~p~~~~a~-~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
++|.+..++ +..|.++...+++++|++.++++++++|++.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~ 178 (334)
T d1dcea1 138 ADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (334)
T ss_dssp HCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred hCchhhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCH
Confidence 999999986 4678899999999999999999999999753
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.69 E-value=5e-08 Score=88.40 Aligned_cols=146 Identities=12% Similarity=0.034 Sum_probs=97.5
Q ss_pred HHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcC-CCCCcccccceecCC
Q 011349 45 QLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLR-SERLVNLIGCCCEGE 123 (488)
Q Consensus 45 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 123 (488)
++......+ ++++..+-++.+.||+... +++.+.||+...........+.+|...++.+. +--+++++.++..++
T Consensus 8 ~l~~~~~~~---~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~ 83 (263)
T d1j7la_ 8 ELKKLIEKY---RCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG 83 (263)
T ss_dssp HHHHHHTTS---EEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred HHHHhhhce---EEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCC
Confidence 344444444 4555444455678998865 44557888876554444556889999998884 444678888888888
Q ss_pred eeeEEEecCCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------
Q 011349 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK-------------------------------- 171 (488)
Q Consensus 124 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------------------------------- 171 (488)
..++||++++|.++.+.... ......++.++++.+..||+.
T Consensus 84 ~~~lv~~~l~G~~~~~~~~~-------~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T d1j7la_ 84 WSNLLMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEEECCSSEEHHHHTTT-------CSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGG
T ss_pred ceEEEEEecccccccccccc-------cccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhh
Confidence 89999999999887654421 111222344444444444421
Q ss_pred ---------------------C---C--cccccccCCceeecCCCCCeeccCCCcc
Q 011349 172 ---------------------G---R--ALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 172 ---------------------~---~--iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
. + ++|+|+.|.|||+++++.+-|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 0 0 6899999999999977666799999864
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.66 E-value=5.1e-08 Score=91.15 Aligned_cols=104 Identities=13% Similarity=-0.030 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc----hHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCC-----
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS----PTVFARRCLCYLLSDMPQEALGDAMQAQVISPDW----- 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~----- 451 (488)
-.++...-+|..++..|++++|+..|+++++..|.++ ..++.++|.+|..+|++++|+..|++++++.|..
T Consensus 10 ~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 89 (366)
T d1hz4a_ 10 MHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHY 89 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchHH
Confidence 3456666789999999999999999999999999833 2578889999999999999999999999886543
Q ss_pred -HHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 452 -PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 452 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
..+++.+|.++...|++.+|...+.+++++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~ 123 (366)
T d1hz4a_ 90 ALWSLIQQSEILFAQGFLQTAWETQEKAFQLINE 123 (366)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 567889999999999999999999999987654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.60 E-value=5.5e-08 Score=96.81 Aligned_cols=83 Identities=12% Similarity=-0.060 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
...+...|..+..+|+|++|+.+|.+|++++|+ +..+|+++|.+|...|++.+|+.+|.+|+.++|.++.|+.+++.++
T Consensus 152 ~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~ 230 (497)
T d1ya0a1 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 457888999999999999999999999999999 9999999999999999999999999999999999999999999988
Q ss_pred HhCC
Q 011349 463 FGLG 466 (488)
Q Consensus 463 ~~~~ 466 (488)
.+..
T Consensus 231 ~~~~ 234 (497)
T d1ya0a1 231 SKAL 234 (497)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 6543
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.48 E-value=1.4e-07 Score=88.13 Aligned_cols=104 Identities=15% Similarity=0.018 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCc---hHHHhcHHHHHHhhCCHHHHHHHHHHHHH------hCCCC
Q 011349 381 QETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVS---PTVFARRCLCYLLSDMPQEALGDAMQAQV------ISPDW 451 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~------l~p~~ 451 (488)
..+..+...|..+...|++++|+..|.++++..|.+. ...+.++|.+|..+|++++|+..+++++. ..|+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 290 (366)
T d1hz4a_ 211 WISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDL 290 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHH
Confidence 4456778889999999999999999999999877622 34567899999999999999999999984 45677
Q ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHhhccccc
Q 011349 452 PTAFYLQAAALFGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 452 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~ 484 (488)
..+++.+|.+|..+|++++|++.|++|+++.+.
T Consensus 291 ~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~ 323 (366)
T d1hz4a_ 291 NRNLLLLNQLYWQAGRKSDAQRVLLDALKLANR 323 (366)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhh
Confidence 889999999999999999999999999998653
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.43 E-value=1.6e-07 Score=77.75 Aligned_cols=67 Identities=19% Similarity=0.117 Sum_probs=58.8
Q ss_pred hHHHhcH--HHHHHhhCCHHHHHHHHHHHHHhCCCCH------------HHHHHHHHHHHhCCChHHHHHHHHHhhcccc
Q 011349 418 PTVFARR--CLCYLLSDMPQEALGDAMQAQVISPDWP------------TAFYLQAAALFGLGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 418 ~~~~~~~--a~~~~~~~~~~~A~~~~~~al~l~p~~~------------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p 483 (488)
..+|.++ |..++..|+|++|+..|++||++.|+.+ .+|+++|.+|..+|++++|++++++++++.|
T Consensus 7 a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~ 86 (156)
T d2hr2a1 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 86 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccc
Confidence 3455555 7788899999999999999999998753 6899999999999999999999999999877
Q ss_pred c
Q 011349 484 K 484 (488)
Q Consensus 484 ~ 484 (488)
+
T Consensus 87 ~ 87 (156)
T d2hr2a1 87 R 87 (156)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.42 E-value=3e-07 Score=71.13 Aligned_cols=82 Identities=5% Similarity=-0.187 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHhc---CChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRA---KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 383 ~~~~~~~g~~~~~~---~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
+.+.++.|.++.+. .+.++||..+++++..+|.+...+++++|.+|.++|+|++|+++++++|+++|++..|...+-
T Consensus 35 ~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~ 114 (124)
T d2pqrb1 35 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 114 (124)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHH
Confidence 45667778888754 456799999999999998734589999999999999999999999999999999999887766
Q ss_pred HHHHh
Q 011349 460 AALFG 464 (488)
Q Consensus 460 ~~~~~ 464 (488)
.+..+
T Consensus 115 ~Ie~~ 119 (124)
T d2pqrb1 115 MVEDK 119 (124)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.31 E-value=9.4e-07 Score=68.31 Aligned_cols=70 Identities=9% Similarity=-0.027 Sum_probs=62.3
Q ss_pred chHHHhcHHHHHHhhCC---HHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 417 SPTVFARRCLCYLLSDM---PQEALGDAMQAQVISPDWP-TAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 417 ~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~l~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.....++.|.|+.+..+ .++|+..++++++.+|.+. +++|++|.+|+++|+|++|..+++++|+++|++.
T Consensus 34 s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~ 107 (124)
T d2pqrb1 34 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 107 (124)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred CcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcH
Confidence 55677888888887644 5689999999999999774 8999999999999999999999999999999875
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.30 E-value=2e-06 Score=79.43 Aligned_cols=100 Identities=13% Similarity=-0.015 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHH-HhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCY-LLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~-~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
..|...+....+.|+++.|...|.+|++..|. ....|...|... ...|+.+.|...|+++++..|+++..|...+..+
T Consensus 135 ~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~ 213 (308)
T d2onda1 135 LVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL 213 (308)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 35778888888999999999999999999999 888888887764 4468899999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHhhccccc
Q 011349 463 FGLGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 463 ~~~~~~~~A~~~~~~al~l~p~ 484 (488)
...|+++.|...|++|++..|.
T Consensus 214 ~~~g~~~~aR~~fe~ai~~~~~ 235 (308)
T d2onda1 214 SHLNEDNNTRVLFERVLTSGSL 235 (308)
T ss_dssp HTTCCHHHHHHHHHHHHHSSSS
T ss_pred HHcCChHHHHHHHHHHHHhCCC
Confidence 9999999999999999987664
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.22 E-value=2.3e-06 Score=76.58 Aligned_cols=70 Identities=16% Similarity=0.154 Sum_probs=53.6
Q ss_pred CceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCC--CCCcccccceecCCeeeEEEecCCCCChhh
Q 011349 67 PNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRS--ERLVNLIGCCCEGEERLLVAEFMPNETLSK 139 (488)
Q Consensus 67 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 139 (488)
.+.||+....++..+.+|...... ...+..|+..++.+.. -.+++++.++.+++..++||++++|.++.+
T Consensus 24 ~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 24 DAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp SCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred CCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccccc
Confidence 367999988788888999876443 3457788888888843 336778888888888999999999877644
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.15 E-value=6.3e-06 Score=76.00 Aligned_cols=104 Identities=8% Similarity=-0.080 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 011349 383 TLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAAL 462 (488)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 462 (488)
...|...+......|++++|...|+++++..|.+...+|...+......|++++|.+.|++|++..|.....|...|...
T Consensus 99 ~~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e 178 (308)
T d2onda1 99 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 178 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 45677888889999999999999999999999844567889999999999999999999999999999999999999865
Q ss_pred H-hCCChHHHHHHHHHhhccccccc
Q 011349 463 F-GLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 463 ~-~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
. ..|+.+.|...|+++++..|+..
T Consensus 179 ~~~~~~~~~a~~i~e~~l~~~p~~~ 203 (308)
T d2onda1 179 YYCSKDKSVAFKIFELGLKKYGDIP 203 (308)
T ss_dssp HHTSCCHHHHHHHHHHHHHHHTTCH
T ss_pred HHhccCHHHHHHHHHHHHHhhhhhH
Confidence 4 56899999999999999988753
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=98.13 E-value=1e-05 Score=72.49 Aligned_cols=97 Identities=13% Similarity=0.124 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPTAFYL 457 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~ 457 (488)
+|.++++.|..+++.+||++|+++|++|.+. . +..+++++|.+|.. ..++..|...+..+.+. +++.+.+.
T Consensus 1 ~p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~--g-~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~--~~~~a~~~ 75 (265)
T d1ouva_ 1 DPKELVGLGAKSYKEKDFTQAKKYFEKACDL--K-ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL--NYSNGCHL 75 (265)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCcchhHHHHHHhhcccccc--cccchhhc
Confidence 4779999999999999999999999999886 3 66788899999998 67899999999998866 48899999
Q ss_pred HHHHHHh----CCChHHHHHHHHHhhcccc
Q 011349 458 QAAALFG----LGMNNDAQETLKDGTNLEA 483 (488)
Q Consensus 458 ~g~~~~~----~~~~~~A~~~~~~al~l~p 483 (488)
+|..+.. ..+.++|...|+++.+..+
T Consensus 76 l~~~~~~~~~~~~~~~~a~~~~~~a~~~g~ 105 (265)
T d1ouva_ 76 LGNLYYSGQGVSQNTNKALQYYSKACDLKY 105 (265)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred cccccccccccchhhHHHHHHHhhhhhhhh
Confidence 9998875 5688999999999987654
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.13 E-value=1.5e-06 Score=78.22 Aligned_cols=61 Identities=21% Similarity=-0.008 Sum_probs=57.2
Q ss_pred HHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCCChHHHHHHHHHhhccccccc
Q 011349 426 LCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 486 (488)
Q Consensus 426 ~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~p~~~ 486 (488)
.-.++.|++++|+..++++|+.+|+++.++..+|.+|..+|++++|++.|+++++++|+..
T Consensus 4 ~~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~ 64 (264)
T d1zbpa1 4 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 64 (264)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcH
Confidence 3456789999999999999999999999999999999999999999999999999999854
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.02 E-value=7.2e-06 Score=69.00 Aligned_cols=69 Identities=17% Similarity=0.199 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHH-------HHhCCCC
Q 011349 382 ETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQA-------QVISPDW 451 (488)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a-------l~l~p~~ 451 (488)
...++..+|..+...|+|++|+..++++++++|. +..+|.+++.+|..+|++.+|++.|+++ +.+.|..
T Consensus 66 ~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 66 KVLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 3568889999999999999999999999999999 9999999999999999999999999998 4466653
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.90 E-value=3.7e-05 Score=73.25 Aligned_cols=90 Identities=16% Similarity=0.072 Sum_probs=53.6
Q ss_pred HHHHhcCCCccc--ccccCCCCCCceEEEEEeC-CCcEEEEEEccC------CC-CCChHHHHHHHHHHhhcC-C--CCC
Q 011349 46 LRAATSGFCADN--IVSEHGEKAPNVVYKGLVD-EDRWIAVKRFNR------SA-WPDSRQFLEEARAVGLLR-S--ERL 112 (488)
Q Consensus 46 ~~~~~~~~~~~~--~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~------~~-~~~~~~~~~E~~~l~~l~-h--~ni 112 (488)
+....+.|.... -.+.+|.|....||++... +++.|+||.-.. .. .....+...|...|+.+. + ..+
T Consensus 16 la~~lg~~~~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~v 95 (392)
T d2pula1 16 LAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLV 95 (392)
T ss_dssp HHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGS
T ss_pred HHHHcCCCCCCCCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCc
Confidence 333344444333 2457899999999999854 467799995432 11 123345667888888773 2 346
Q ss_pred cccccceecCCeeeEEEecCCCCCh
Q 011349 113 VNLIGCCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 113 v~~~~~~~~~~~~~lv~e~~~~gsL 137 (488)
++++.+ +.+..++|||++.+..+
T Consensus 96 P~v~~~--d~~~~~lvmE~L~~~~~ 118 (392)
T d2pula1 96 PRVFYS--DTEMAVTVMEDLSHLKI 118 (392)
T ss_dssp CCEEEE--ETTTTEEEECCCTTSEE
T ss_pred ceEEEE--cCCCCEEEEeccCCccc
Confidence 666654 45566899999976543
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.74 E-value=0.00012 Score=57.94 Aligned_cols=92 Identities=8% Similarity=-0.084 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 011349 384 LNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWPTAFYLQA 459 (488)
Q Consensus 384 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g 459 (488)
.+++..|. ....++++|+..|+++.+. . ++.+.+++|..|.. ..++++|++.|+++.+. .++.+.+++|
T Consensus 26 ~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g-~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg 98 (133)
T d1klxa_ 26 FGCLSLVS--NSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILG 98 (133)
T ss_dssp THHHHHHT--CTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred hhhhhhcc--ccccCHHHHHHHHhhhhcc--c-chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHH
Confidence 34444443 3457899999999999985 3 66788899999886 56799999999999986 6899999999
Q ss_pred HHHHh----CCChHHHHHHHHHhhccc
Q 011349 460 AALFG----LGMNNDAQETLKDGTNLE 482 (488)
Q Consensus 460 ~~~~~----~~~~~~A~~~~~~al~l~ 482 (488)
.+|.. ..++++|+..|++|.++.
T Consensus 99 ~~y~~G~gv~~d~~~A~~~~~~Aa~~G 125 (133)
T d1klxa_ 99 YKQYAGKGVVKNEKQAVKTFEKACRLG 125 (133)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHcCCccCCCHHHHHHHHHHHHHCC
Confidence 99987 568999999999998764
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.69 E-value=0.00019 Score=66.34 Aligned_cols=99 Identities=16% Similarity=0.104 Sum_probs=62.2
Q ss_pred CccccCHHHHHHHhcCC--CcccccccCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCc-
Q 011349 37 GFREFNLDQLRAATSGF--CADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLV- 113 (488)
Q Consensus 37 ~~~~~~~~~~~~~~~~~--~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv- 113 (488)
.+..++.+.+..+...+ ..+.-+..|+ +.-..||++..++|+.|++|+.+... ...+++..|...+..|...++.
T Consensus 4 ~f~~L~pd~i~~al~~~g~~~~~~~~~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~~~gipv 81 (325)
T d1zyla1 4 TFQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPV 81 (325)
T ss_dssp CCCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSB
T ss_pred CccccCHHHHHHHHHHcCCCCCcCccccc-cccceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHHhcCCCC
Confidence 35556677666655433 2222222343 33468999999899999999987653 3457788999999888543332
Q ss_pred -cccc-----ceecCCeeeEEEecCCCCCh
Q 011349 114 -NLIG-----CCCEGEERLLVAEFMPNETL 137 (488)
Q Consensus 114 -~~~~-----~~~~~~~~~lv~e~~~~gsL 137 (488)
..+. .+...+..+.++++++|..+
T Consensus 82 ~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~ 111 (325)
T d1zyla1 82 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQF 111 (325)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCEEC
T ss_pred CCceecCCCeeeeeeeEEEEEEeecCCcCC
Confidence 1111 12234567889999987543
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.63 E-value=0.00013 Score=65.02 Aligned_cols=99 Identities=19% Similarity=0.129 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHh----cCChHHHHHHHHHhhccCCCCchHHHhcHHHHHHh----hCCHHHHHHHHHHHHHhCCCCH
Q 011349 381 QETLNSKKRGDAAFR----AKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLL----SDMPQEALGDAMQAQVISPDWP 452 (488)
Q Consensus 381 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~l~p~~~ 452 (488)
.+...++..|..+.. ..+...+...++++.+. . ++.+.+++|.+|.. .+++++|+..|.+|.+. +++
T Consensus 140 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~--g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~ 214 (265)
T d1ouva_ 140 NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENG 214 (265)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred cccchhhhhhhhhccCCCcccccccchhhhhccccc--c-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCH
Confidence 345567778888875 56788899999998864 3 66788999999987 67899999999999998 579
Q ss_pred HHHHHHHHHHHh----CCChHHHHHHHHHhhccccc
Q 011349 453 TAFYLQAAALFG----LGMNNDAQETLKDGTNLEAK 484 (488)
Q Consensus 453 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~p~ 484 (488)
.|++++|.+|.. .+++++|+++|++|.++...
T Consensus 215 ~a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~ 250 (265)
T d1ouva_ 215 GGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAK 250 (265)
T ss_dssp HHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcCH
Confidence 999999999986 44899999999999887543
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.14 E-value=0.00073 Score=61.78 Aligned_cols=158 Identities=13% Similarity=0.030 Sum_probs=88.5
Q ss_pred ccCHHHHHHHhcCCCcccccc--cCCCCCCceEEEEEeCCCcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCCCc--cc
Q 011349 40 EFNLDQLRAATSGFCADNIVS--EHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLV--NL 115 (488)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~--~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv--~~ 115 (488)
..+.+|+......|+-..+.. .|..|--.+.|+....+|+ +++|++.... +.+.+..|+.++..+...++. ..
T Consensus 2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~p 78 (316)
T d2ppqa1 2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 78 (316)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC--CHHHHHHHHHHHHhhhhcccccccc
Confidence 357788888888876544443 3557777889999887776 8999986532 335667788888888543322 11
Q ss_pred cc------ceecCCeeeEEEecCCCCChhhhhcc------------------C----CCCCC-----------------C
Q 011349 116 IG------CCCEGEERLLVAEFMPNETLSKHLFH------------------W----ENQPM-----------------K 150 (488)
Q Consensus 116 ~~------~~~~~~~~~lv~e~~~~gsL~~~l~~------------------~----~~~~l-----------------~ 150 (488)
+. +.........++.++.|......-.. . ..... .
T Consensus 79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (316)
T d2ppqa1 79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 158 (316)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence 11 11123456677777766433211000 0 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHh----CCCcccccccCCceeecCCCCCeeccCCCcc
Q 011349 151 WAMRVRVALYLAQALDYCSS----KGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201 (488)
Q Consensus 151 ~~~~~~i~~~i~~~l~~LH~----~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 201 (488)
.......+..+...+.-.+. .| +||+|+.+.||+++.+...-|.||+.+.
T Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~L~~g-iIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 159 EKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred chhHHHHHHHHHHhhhccCccccccc-cccCCcchhhhhcccccceeEecccccc
Confidence 00111222223333333322 24 8999999999999988777899999864
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.11 E-value=0.00099 Score=63.07 Aligned_cols=74 Identities=16% Similarity=0.241 Sum_probs=52.3
Q ss_pred cccCCCCCCceEEEEEeCC--------CcEEEEEEccCCCCCChHHHHHHHHHHhhcCCCC-CcccccceecCCeeeEEE
Q 011349 59 VSEHGEKAPNVVYKGLVDE--------DRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSER-LVNLIGCCCEGEERLLVA 129 (488)
Q Consensus 59 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 129 (488)
+++|+.|-...+|++...+ .+.|.+++... . .......+|..+++.+.-.+ .+++++++.+ .+||
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ 120 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-P-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 120 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-C-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-c-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence 5678889999999998644 34577777652 2 23445678999999985334 4578877643 6899
Q ss_pred ecCCCCChh
Q 011349 130 EFMPNETLS 138 (488)
Q Consensus 130 e~~~~gsL~ 138 (488)
||++|.+|.
T Consensus 121 efi~g~~l~ 129 (395)
T d1nw1a_ 121 EYIPSRPLS 129 (395)
T ss_dssp CCCCEEECC
T ss_pred EEeccccCC
Confidence 999986554
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.10 E-value=0.00068 Score=53.30 Aligned_cols=79 Identities=13% Similarity=-0.031 Sum_probs=64.7
Q ss_pred CChHHHHHHHHHhhccCCCCchHHHhcHHHHHHhhCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh----CCChHHHH
Q 011349 397 KDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFG----LGMNNDAQ 472 (488)
Q Consensus 397 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A~ 472 (488)
.|+++|+..|++|.+.+.. .+.++++. ....++++|+..++++.+. +++.+.+.+|..|.. ..++++|+
T Consensus 7 kd~~~A~~~~~kaa~~g~~---~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A~ 79 (133)
T d1klxa_ 7 KDLKKAIQYYVKACELNEM---FGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 79 (133)
T ss_dssp HHHHHHHHHHHHHHHTTCT---THHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCh---hhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHHH
Confidence 5899999999999987533 34445543 4567899999999999886 789999999999876 56799999
Q ss_pred HHHHHhhccc
Q 011349 473 ETLKDGTNLE 482 (488)
Q Consensus 473 ~~~~~al~l~ 482 (488)
+.|++|.+..
T Consensus 80 ~~~~~aa~~g 89 (133)
T d1klxa_ 80 QYYSKACGLN 89 (133)
T ss_dssp HHHHHHHHTT
T ss_pred HHHhhhhccC
Confidence 9999998763
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.14 E-value=0.37 Score=32.63 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhh
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFI 410 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai 410 (488)
.+-|-.+-.+|..+...|+|++||+++.+|.
T Consensus 5 LN~AH~~~RrAer~l~~~rydeAIech~kA~ 35 (83)
T d2crba1 5 LNLAHQQSRRADRLLAAGKYEEAISCHRKAT 35 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4556677788999999999999999998875
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.35 E-value=0.32 Score=34.50 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhhc
Q 011349 380 IQETLNSKKRGDAAFRAKDFPTAIECYTHFID 411 (488)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 411 (488)
...|..+..+|..+-..|+|++|+.+|.+||+
T Consensus 12 ~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie 43 (93)
T d1wfda_ 12 STAAVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35677888999999999999999999999975
|
| >d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Vacuolar sorting protein 4b (VPS4B, SKD1 protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.02 E-value=0.27 Score=33.50 Aligned_cols=33 Identities=15% Similarity=0.409 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHHHHHhcCChHHHHHHHHHhhc
Q 011349 379 QIQETLNSKKRGDAAFRAKDFPTAIECYTHFID 411 (488)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 411 (488)
.++.|..+..+|..+-+.|+|++|+.+|.+|++
T Consensus 7 ~l~~A~~l~~~Av~~D~~~~y~~A~~~Y~~a~~ 39 (77)
T d1wr0a1 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 39 (77)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 346678888899999999999999999999875
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.94 E-value=0.72 Score=31.14 Aligned_cols=26 Identities=23% Similarity=0.121 Sum_probs=14.9
Q ss_pred HHhcHHHHHHhhCCHHHHHHHHHHHH
Q 011349 420 VFARRCLCYLLSDMPQEALGDAMQAQ 445 (488)
Q Consensus 420 ~~~~~a~~~~~~~~~~~A~~~~~~al 445 (488)
.+..+|..+++.|+|++||++..+|.
T Consensus 10 ~~~RrAer~l~~~rydeAIech~kA~ 35 (83)
T d2crba1 10 QQSRRADRLLAAGKYEEAISCHRKAT 35 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34455556666666666666655543
|