Citrus Sinensis ID: 011383

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------
MTVEVVKVEEETQKVDGVAATKEEPKSVTKCSSYKEESNFLSDLKEFERKALNEFKAKLEEAILGNSLLNKEEETIKKNEKAAAGGVVEKEKEAEKPVDEEAEQEEDKNPKEQIAQEVEKEAEKEEEKNEAEGEEKCVEVDKDIALWGVPLLPSKGAEGIDVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSILDEDLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDFEFSKEGGAVSEITLKAGSTETIEIQAPEIGTTITWDLTVLGWEVSYKEEFVPTDEGSYTIIVQKGKKMGSHEGPIRNTFKNNEAGKLVLTIDNASSKKKRVLYRYKTKNFSS
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEcccccccEEEEEEcccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHcccHHcccEEEEEccHHHHHHHHHHccccccccccEEEEEcccccHHHHHcccccccccccccccccccccccccccccccEEEEcccccEEEEEEccccccEEEEEEEEccEEEEEEEEEEEcccccEEEEEEcccccccccccEEcEEEcccccEEEEEEEcccccccEEEEEEEEEcccc
ccEEEEEEEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccccHccccccccccEccccccccccHHHHHHHHHHHHHHHcHHHHHHHcccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHccccHHEcccccccccccccEEEEEEccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHccHHHHHHEEEEEccHHHHHHHHHHcHccccccccEEEEEccccHHHHHcccccccccEHHHccccccccccccccccccccEEEcccccEEEEEEEEccccEEEEEEEEcccEEEEEEEEEcccccccEEEEEccccccccccccccEEEEccccEEEEEEEcccccccEEEEEEEEEcccc
MTVEVVKVEEetqkvdgvaatkeepksvtkcssykeesNFLSDLKEFERKALNEFKAKLEEAILGNSLLNKEEETIKKNEKAaaggvvekekeaekpvdeeaeqeedknpkEQIAQEVEKEAEKEEEKNEAEGEEKCVEVDKdialwgvpllpskgaegIDVILLKFLRAREFKVNDALEMLKNTLQwrkgnkidsildedlevdlssaaymngvdreghpvcyniygvfesdelyqktfgteEKRGQFLRWRLRLMEQGIqkldfkpggissllqindlknapvlAKKELRVATKQAVDLLqnnypefvarniiiNAPFWYYALNALISpfltqrtkskfvvarpaKVTETLLKyipaeelpvqyggfkrendfefskeggavseitlkagstetieiqapeigttiTWDLTVLgwevsykeefvptdegsYTIIVQKgkkmgshegpirntfknneagkLVLTIDNASSKKKRVLYRYKTKNFSS
mtvevvkveeetqkvdgvaatkeepksvtkcssykeesnflsdLKEFERKALNEFKAKLEeailgnsllnkeeetIKKNekaaaggvvekekeaekpvdeeaeqeedknpkeQIAQEVEKEaekeeekneaegeekcvevDKDIALWGvpllpskgaeGIDVILLKFLRAREFKVNDALEMLkntlqwrkgnkidsILDEDLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVtetllkyipaeelpvqyggFKRENDFEFSKEGGAVSEitlkagstetieiqapeigttitWDLTVLGWEVSYKeefvptdegsYTIIVQKGKKMGSHEGPIrntfknneagklvltidnasskkkrvlyryktknfss
MTvevvkveeeTQKVDGVAATKEEPKSVTKCSSYKEESNFLSDLKEFERKALNEFKAKLEEAILGNSLLNkeeetikknekaaaggvvekekeaekpvdeeaeqeedknpkeqiaqevekeaekeeekneaegeekcvevDKDIALWGVPLLPSKGAEGIDVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSILDEDLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDFEFSKEGGAVSEITLKAGSTETIEIQAPEIGTTITWDLTVLGWEVSYKEEFVPTDEGSYTIIVQKGKKMGSHEGPIRNTFKNNEAGKLVLTIDNASSKKKRVLYRYKTKNFSS
****************************************************************************************************************************************CVEVDKDIALWGVPLLPSKGAEGIDVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSILDEDLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDFEFSKEGGAVSEITLKAGSTETIEIQAPEIGTTITWDLTVLGWEVSYKEEFVPTDEGSYTIIVQK********************GKLVLTID********VLY*********
****************************************************************************************************************************************CVEVDKDIALWGVPLLPSKGAEGIDVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSILDEDLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDFEFSKEGGAVSEITLKAGSTETIEIQAPEIGTTITWDLTVLGWEVSYKEEFVPTD************K***H*GPIRNTFKNNEAGKLVLTIDNASSKKKRVLYRYKTKN***
MTVEVVKVEEETQKVDG*********************NFLSDLKEFERKALNEFKAKLEEAILGNSLLNKEEETIKK**********************************QIAQ********************CVEVDKDIALWGVPLLPSKGAEGIDVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSILDEDLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDFEFSKEGGAVSEITLKAGSTETIEIQAPEIGTTITWDLTVLGWEVSYKEEFVPTDEGSYTIIVQKGKKMGSHEGPIRNTFKNNEAGKLVLTIDNASSKKKRVLYRYKTKNFSS
*TVEVVKVEEETQKV*************************LSDLKEFERKALNEFKAKLEEAILG*********************************************************EKEEEKNEAEGEEKCVEVDKDIALWGVPLLPSKGAEGIDVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSILDEDLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDFEFSKEGGAVSEITLKAGSTETIEIQAPEIGTTITWDLTVLGWEVSYKEEFVPTDEGSYTIIVQKGKKMGSHEGPIRNTFKNNEAGKLVLTIDNASSKKKRVLYRYKTKN***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MTVEVVKVEEETQKVDGVAATKEEPKSVTKCSSYKEESNFLSDLKEFERKALNEFKAKLEEAILGNSLLNKEEETIKKNEKAAAGGVVEKEKEAEKPVDEEAEQEEDxxxxxxxxxxxxxxxxxxxxxxxxxxxxKCVEVDKDIALWGVPLLPSKGAEGIDVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSILDEDLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDFEFSKEGGAVSEITLKAGSTETIEIQAPEIGTTITWDLTVLGWEVSYKEEFVPTDEGSYTIIVQKGKKMGSHEGPIRNTFKNNEAGKLVLTIDNASSKKKRVLYRYKTKNFSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query487 2.2.26 [Sep-21-2011]
Q94C59540 Patellin-4 OS=Arabidopsis yes no 0.700 0.631 0.704 1e-148
Q56Z59490 Patellin-3 OS=Arabidopsis no no 0.716 0.712 0.511 1e-105
Q9M0R2668 Patellin-5 OS=Arabidopsis no no 0.691 0.504 0.505 1e-101
Q9SCU1409 Patellin-6 OS=Arabidopsis no no 0.677 0.806 0.498 2e-93
Q56ZI2683 Patellin-2 OS=Arabidopsis no no 0.919 0.655 0.390 4e-80
Q56WK6573 Patellin-1 OS=Arabidopsis no no 0.671 0.570 0.454 9e-79
Q6C9R9362 Phosphatidylinositol tran yes no 0.404 0.544 0.342 1e-22
Q75DK1308 SEC14 cytosolic factor OS yes no 0.410 0.649 0.345 2e-20
P24280304 SEC14 cytosolic factor OS yes no 0.453 0.726 0.329 4e-19
A3LPR9328 Phosphatidylinositol tran yes no 0.410 0.609 0.310 2e-18
>sp|Q94C59|PATL4_ARATH Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2 Back     alignment and function desciption
 Score =  523 bits (1348), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 245/348 (70%), Positives = 296/348 (85%), Gaps = 7/348 (2%)

Query: 140 VDKDIALWGVPLLPSKGAEGIDVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSILD 199
           VDKDI LWGVPLLPSKGAE  DVILLKFLRAR+FKVN+A EMLK TL+WRK NKIDSIL 
Sbjct: 199 VDKDIELWGVPLLPSKGAESTDVILLKFLRARDFKVNEAFEMLKKTLKWRKQNKIDSILG 258

Query: 200 EDLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQ 259
           E+   DL++AAYMNGVDRE HPVCYN++    S+ELYQ T G+E+ R +FLRWR +LME+
Sbjct: 259 EEFGEDLATAAYMNGVDRESHPVCYNVH----SEELYQ-TIGSEKNREKFLRWRFQLMEK 313

Query: 260 GIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAP 319
           GIQKL+ KPGG++SLLQI+DLKNAP +++ E+ V  K+ ++ LQ+NYPEFV+RNI IN P
Sbjct: 314 GIQKLNLKPGGVTSLLQIHDLKNAPGVSRTEIWVGIKKVIETLQDNYPEFVSRNIFINVP 373

Query: 320 FWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDFEFSK 379
           FW+YA+ A++SPFLTQRTKSKFVVARPAKV ETLLKYIPA+ELPVQYGGFK  +D EFS 
Sbjct: 374 FWFYAMRAVLSPFLTQRTKSKFVVARPAKVRETLLKYIPADELPVQYGGFKTVDDTEFSN 433

Query: 380 EGGAVSEITLKAGSTETIEIQAPEIGTTITWDLTVLGWEVSYKEEFVPTDEGSYTIIVQK 439
           E   VSE+ +K GS+ETIEI APE   T+ WD+ VLGWEV+YKEEFVPT+EG+YT+IVQK
Sbjct: 434 E--TVSEVVVKPGSSETIEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTVIVQK 491

Query: 440 GKKMGSHEGPIRNTFKNNEAGKLVLTIDNASSKKKRVLYRYKTKNFSS 487
            KKMG++EGPIRN+FKN++AGK+VLT+DN S KKK+VLYRY+TK  SS
Sbjct: 492 VKKMGANEGPIRNSFKNSQAGKIVLTVDNVSGKKKKVLYRYRTKTESS 539
Carrier protein that may be involved in membrane-trafficking events associated with cell plate formation during cytokinesis. Binds to some hydrophobic molecules such as phosphoinositides and promotes their transfer between the different cellular sites.
Arabidopsis thaliana (taxid: 3702)
>sp|Q56Z59|PATL3_ARATH Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2 Back     alignment and function description
>sp|Q9M0R2|PATL5_ARATH Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2 Back     alignment and function description
>sp|Q9SCU1|PATL6_ARATH Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1 Back     alignment and function description
>sp|Q56ZI2|PATL2_ARATH Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2 Back     alignment and function description
>sp|Q56WK6|PATL1_ARATH Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2 Back     alignment and function description
>sp|Q6C9R9|SFH5_YARLI Phosphatidylinositol transfer protein SFH5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SFH5 PE=3 SV=1 Back     alignment and function description
>sp|Q75DK1|SEC14_ASHGO SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 Back     alignment and function description
>sp|A3LPR9|SFH5_PICST Phosphatidylinositol transfer protein SFH5 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=SFH5 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query487
147864826493 hypothetical protein VITISV_004911 [Viti 0.969 0.957 0.669 0.0
224056779525 predicted protein [Populus trichocarpa] 0.975 0.904 0.681 1e-180
255564301535 Patellin-4, putative [Ricinus communis] 0.950 0.865 0.663 1e-180
225444143493 PREDICTED: patellin-4 isoform 1 [Vitis v 0.975 0.963 0.673 1e-180
297740886452 unnamed protein product [Vitis vinifera] 0.924 0.995 0.672 1e-179
359483972501 PREDICTED: patellin-4 isoform 2 [Vitis v 0.975 0.948 0.662 1e-178
449435546489 PREDICTED: patellin-4-like [Cucumis sati 0.948 0.944 0.637 1e-174
363808330465 uncharacterized protein LOC100779100 [Gl 0.694 0.726 0.779 1e-160
297846014546 predicted protein [Arabidopsis lyrata su 0.938 0.836 0.599 1e-157
356533153467 PREDICTED: patellin-4-like [Glycine max] 0.694 0.723 0.764 1e-157
>gi|147864826|emb|CAN83643.1| hypothetical protein VITISV_004911 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/490 (66%), Positives = 381/490 (77%), Gaps = 18/490 (3%)

Query: 1   MTVEVVKVEEETQKVDGVAATKEEPKSVTKCSSYKEESNFLSDLKEFERKALNEFKAKLE 60
           MT   V + EE + V+ V   K  PK+V K SSY+EESNFLSDLK+ E KAL E ++KLE
Sbjct: 18  MTEVSVSLPEEEKAVEKVNEAK--PKTVEKSSSYREESNFLSDLKDNENKALIELRSKLE 75

Query: 61  EAILGNSLLNKEE---ETIKKNEKAAAGGVVEKEKEAEKPVDEEAEQEEDKNPKEQIAQE 117
           EAIL N+L  KEE   ET  ++++       +KEKE E       E+ E K         
Sbjct: 76  EAILRNTLFKKEELKKETASESKEEQPAAAXKKEKEPEATDGAAPEEAEPKT-------- 127

Query: 118 VEKEAEKEEEKNEAEGEEKCVEVDKDIALWGVPLLPSKGAEGIDVILLKFLRAREFKVND 177
              E E ++  +E E  E+ V  D+DI LWGVPLLPSK AEG DVILLKFLRAREFKVN+
Sbjct: 128 ---EGEDKQSSSEVEKPEEVV--DRDITLWGVPLLPSKCAEGNDVILLKFLRAREFKVNE 182

Query: 178 ALEMLKNTLQWRKGNKIDSILDEDLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQ 237
           A EMLK TL+WRK  K DSIL+E+L  D+SS AYMNGVDREGHP+CYNIYGV E+ ELYQ
Sbjct: 183 AFEMLKKTLEWRKEFKTDSILEEELGQDISSVAYMNGVDREGHPICYNIYGVLENQELYQ 242

Query: 238 KTFGTEEKRGQFLRWRLRLMEQGIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQ 297
           KTFGTEEKR QFLRWR++LME+GIQKLDFKPGG++SLLQINDL N+P  +KKE+R+ATKQ
Sbjct: 243 KTFGTEEKRNQFLRWRIQLMEKGIQKLDFKPGGVTSLLQINDLSNSPGPSKKEIRIATKQ 302

Query: 298 AVDLLQNNYPEFVARNIIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYI 357
           AV LLQ+NYPEFVARNI IN PFWYYALNAL+SPFLTQRTKSKFV  RP+KVTETLLKYI
Sbjct: 303 AVGLLQDNYPEFVARNIFINVPFWYYALNALLSPFLTQRTKSKFVFVRPSKVTETLLKYI 362

Query: 358 PAEELPVQYGGFKRENDFEFSKEGGAVSEITLKAGSTETIEIQAPEIGTTITWDLTVLGW 417
             EE+P QYGG KRE D EFS E G V+E+ +KAGSTETIEI  PE+GTT+ WDLTVLGW
Sbjct: 363 CVEEIPXQYGGLKREKDTEFSIEDGGVTELVVKAGSTETIEIPVPEVGTTLVWDLTVLGW 422

Query: 418 EVSYKEEFVPTDEGSYTIIVQKGKKMGSHEGPIRNTFKNNEAGKLVLTIDNASSKKKRVL 477
           EV+YKEEFVP DEGSYTII+QKGKKMGS E P+RN+F NNE GK+VLTI+N+ SKKKR+ 
Sbjct: 423 EVNYKEEFVPADEGSYTIIIQKGKKMGSQEEPVRNSFLNNEPGKVVLTIENSVSKKKRIF 482

Query: 478 YRYKTKNFSS 487
           YRYKTKN SS
Sbjct: 483 YRYKTKNCSS 492

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224056779|ref|XP_002299019.1| predicted protein [Populus trichocarpa] gi|222846277|gb|EEE83824.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255564301|ref|XP_002523147.1| Patellin-4, putative [Ricinus communis] gi|223537554|gb|EEF39178.1| Patellin-4, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225444143|ref|XP_002268764.1| PREDICTED: patellin-4 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740886|emb|CBI31068.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359483972|ref|XP_003633046.1| PREDICTED: patellin-4 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449435546|ref|XP_004135556.1| PREDICTED: patellin-4-like [Cucumis sativus] gi|449488516|ref|XP_004158065.1| PREDICTED: patellin-4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|363808330|ref|NP_001242249.1| uncharacterized protein LOC100779100 [Glycine max] gi|255639159|gb|ACU19879.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|297846014|ref|XP_002890888.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297336730|gb|EFH67147.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356533153|ref|XP_003535132.1| PREDICTED: patellin-4-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query487
TAIR|locus:2204594540 AT1G30690 [Arabidopsis thalian 0.698 0.629 0.703 3.8e-144
TAIR|locus:2207016490 AT1G72160 "AT1G72160" [Arabido 0.691 0.687 0.526 5.8e-103
TAIR|locus:2141563668 AT4G09160 "AT4G09160" [Arabido 0.685 0.5 0.510 6.9e-96
TAIR|locus:2098282409 AT3G51670 "AT3G51670" [Arabido 0.689 0.821 0.495 1.6e-92
TAIR|locus:2009502683 PATL2 "PATELLIN 2" [Arabidopsi 0.679 0.484 0.455 1.9e-83
TAIR|locus:2207001573 PATL1 "AT1G72150" [Arabidopsis 0.677 0.575 0.450 3.6e-78
DICTYBASE|DDB_G0270022444 DDB_G0270022 "cellular retinal 0.521 0.572 0.315 4.4e-34
SGD|S000004684304 SEC14 "Phosphatidylinositol/ph 0.453 0.726 0.346 6.4e-21
POMBASE|SPAC3H8.10286 spo20 "sec14 cytosolic factor 0.420 0.716 0.302 5.4e-17
SGD|S000001574310 YKL091C "Putative homolog of S 0.447 0.703 0.298 2e-16
TAIR|locus:2204594 AT1G30690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1288 (458.5 bits), Expect = 3.8e-144, Sum P(2) = 3.8e-144
 Identities = 244/347 (70%), Positives = 295/347 (85%)

Query:   141 DKDIALWGVPLLPSKGAEGIDVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSILDE 200
             DKDI LWGVPLLPSKGAE  DVILLKFLRAR+FKVN+A EMLK TL+WRK NKIDSIL E
Sbjct:   200 DKDIELWGVPLLPSKGAESTDVILLKFLRARDFKVNEAFEMLKKTLKWRKQNKIDSILGE 259

Query:   201 DLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQG 260
             +   DL++AAYMNGVDRE HPVCYN++    S+ELYQ T G+E+ R +FLRWR +LME+G
Sbjct:   260 EFGEDLATAAYMNGVDRESHPVCYNVH----SEELYQ-TIGSEKNREKFLRWRFQLMEKG 314

Query:   261 IQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAPF 320
             IQKL+ KPGG++SLLQI+DLKNAP +++ E+ V  K+ ++ LQ+NYPEFV+RNI IN PF
Sbjct:   315 IQKLNLKPGGVTSLLQIHDLKNAPGVSRTEIWVGIKKVIETLQDNYPEFVSRNIFINVPF 374

Query:   321 WYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDFEFSKE 380
             W+YA+ A++SPFLTQRTKSKFVVARPAKV ETLLKYIPA+ELPVQYGGFK  +D EFS E
Sbjct:   375 WFYAMRAVLSPFLTQRTKSKFVVARPAKVRETLLKYIPADELPVQYGGFKTVDDTEFSNE 434

Query:   381 GGAVSEITLKAGSTETIEIQAPEIGTTITWDLTVLGWEVSYKEEFVPTDEGSYTIIVQKG 440
                VSE+ +K GS+ETIEI APE   T+ WD+ VLGWEV+YKEEFVPT+EG+YT+IVQK 
Sbjct:   435 --TVSEVVVKPGSSETIEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTVIVQKV 492

Query:   441 KKMGSHEGPIRNTFKNNEAGKLVLTIDNASSKKKRVLYRYKTKNFSS 487
             KKMG++EGPIRN+FKN++AGK+VLT+DN S KKK+VLYRY+TK  SS
Sbjct:   493 KKMGANEGPIRNSFKNSQAGKIVLTVDNVSGKKKKVLYRYRTKTESS 539
GO:0005215 "transporter activity" evidence=IEA;ISS
GO:0005622 "intracellular" evidence=IEA
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0006810 "transport" evidence=IEA;ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0052541 "plant-type cell wall cellulose metabolic process" evidence=RCA
GO:0052546 "cell wall pectin metabolic process" evidence=RCA
TAIR|locus:2207016 AT1G72160 "AT1G72160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141563 AT4G09160 "AT4G09160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098282 AT3G51670 "AT3G51670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009502 PATL2 "PATELLIN 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207001 PATL1 "AT1G72150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270022 DDB_G0270022 "cellular retinaldehyde-binding/triple function domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
SGD|S000004684 SEC14 "Phosphatidylinositol/phosphatidylcholine transfer protein" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
POMBASE|SPAC3H8.10 spo20 "sec14 cytosolic factor family Sec14" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
SGD|S000001574 YKL091C "Putative homolog of Sec14p" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94C59PATL4_ARATHNo assigned EC number0.70400.70020.6314yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query487
cd00170157 cd00170, SEC14, Sec14p-like lipid-binding domain 2e-33
smart00516158 smart00516, SEC14, Domain in homologues of a S 6e-32
pfam00650152 pfam00650, CRAL_TRIO, CRAL/TRIO domain 5e-25
pfam0376548 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal doma 1e-06
smart0110048 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal dom 2e-06
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 8e-05
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 1e-04
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 1e-04
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 3e-04
pfam00183 529 pfam00183, HSP90, Hsp90 protein 5e-04
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 6e-04
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 9e-04
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 0.001
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 0.002
>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain Back     alignment and domain information 
 Score =  123 bits (311), Expect = 2e-33
 Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 200 EDLEVDLSSAAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQ 259
            +   +L    Y+ G D+EG PV     G    ++   K+  +EE     LR+ +  +E+
Sbjct: 1   LEELKELGKVGYLGGRDKEGRPVLIIRAG----NKDLSKSLDSEE----LLRYLVYTLEK 52

Query: 260 GIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAP 319
            +Q+ D     +   + I DLK   +          K+ + +LQ+NYPE +    IIN P
Sbjct: 53  LLQEDDE---QVEGFVVIIDLKGLSLSHLLPDPSLLKKILKILQDNYPERLKAVYIINPP 109

Query: 320 FWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGG 368
           +++  L  ++ PFL+++T+ K V     K  E LLKYI  E+LP +YGG
Sbjct: 110 WFFKVLWKIVKPFLSEKTRKKIVFLGSDK--EELLKYIDKEQLPEEYGG 156

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157
>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S Back     alignment and domain information
>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|217718 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|215024 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 487
KOG1470324 consensus Phosphatidylinositol transfer protein PD 100.0
KOG1471317 consensus Phosphatidylinositol transfer protein SE 100.0
PF00650159 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T 99.96
smart00516158 SEC14 Domain in homologues of a S. cerevisiae phos 99.93
cd00170157 SEC14 Sec14p-like lipid-binding domain. Found in s 99.92
PF13897136 GOLD_2: Golgi-dynamics membrane-trafficking 99.86
KOG3878469 consensus Protein involved in maintenance of Golgi 99.54
PF13716149 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q 99.42
PF0376555 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr 98.31
KOG4406 467 consensus CDC42 Rho GTPase-activating protein [Sig 97.91
KOG3287 236 consensus Membrane trafficking protein, emp24/gp25 96.69
KOG1693209 consensus emp24/gp25L/p24 family of membrane traff 95.3
KOG1692201 consensus Putative cargo transport protein EMP24 ( 94.85
PF01105183 EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro 83.9
>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.2e-38  Score=314.73  Aligned_cols=199  Identities=30%  Similarity=0.529  Sum_probs=175.0

Q ss_pred             CCCCCHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCCC-cccchhhhhh-hcceeecccCCCCCeEEEEeccccCch
Q 011383          156 GAEGIDVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDS-ILDEDLEVDL-SSAAYMNGVDREGHPVCYNIYGVFESD  233 (487)
Q Consensus       156 ~~~~~D~~LLRFLrAr~fdv~~A~~~L~~~l~WRk~~~id~-i~~~~~~~el-~~~~~~~G~Dk~GrPV~~~~~g~~d~~  233 (487)
                      ..+++|.++|||||||+|||.+|.+||.++|.||+.+++.. +..+++..++ .|++|+.|+|++||||+|+++....  
T Consensus        44 ~~~~~d~cllRfLrAr~wnv~kA~kml~~tL~WR~~~~~~~~~~~~Ev~~e~~tGK~yi~G~D~~gRPVl~~~~~~~~--  121 (324)
T KOG1470|consen   44 SKWCSDACLLRFLRARKWNVKKASKMLSNTLKWRRSFGPEEVIEADEVAAELETGKAYILGHDKDGRPVLYLRPRPHR--  121 (324)
T ss_pred             HhcCcHHHHHHHHHHcCCcHHHHHHHHHHHhHHHHhcCCccccCHHHHHHHhhcCcEEEecccCCCCeEEEEecCCCC--
Confidence            45679999999999999999999999999999999999988 6656676666 6899999999999999999654321  


Q ss_pred             hhhhhhcCChhhHHHHHHHHHHHHHHHHHhhcCCCCCeeeeEEEEeCCCCCccchhhHHHHHHHHHHHhcccccccccee
Q 011383          234 ELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFKPGGISSLLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARN  313 (487)
Q Consensus       234 ~l~~~~~~~e~~~~~~lr~~i~~~E~~l~~l~~~~~~i~~iv~IiDl~g~s~~~~~~l~~~~k~ii~llq~~YPE~L~~i  313 (487)
                         +++    .+...+.|+.+|+||.++..|   +.++.++++|+|++|+++. +.++ ...+.++++||+||||||+..
T Consensus       122 ---qn~----~t~~~~~r~~Vy~mE~Ai~~l---p~~qe~~~~L~D~~~fs~s-N~d~-~~~k~~~~~lq~hYPErLg~a  189 (324)
T KOG1470|consen  122 ---QNT----KTQKELERLLVYTLENAILFL---PPGQEQFVWLFDLTGFSMS-NPDI-KFLKELLHILQDHYPERLGKA  189 (324)
T ss_pred             ---CCC----CCHHHHHHHHHHHHHHHHHhC---CCCcceEEEEEecccCccc-CCCc-HHHHHHHHHHHHhChHHhhhh
Confidence               121    346889999999999999776   6788999999999999954 4444 688999999999999999999


Q ss_pred             EEEeCchHHHHHHHHhcccCChhhhcceEEeCCccchHHHhccCCCCCcccccCCccc
Q 011383          314 IIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKR  371 (487)
Q Consensus       314 ~IINaP~~f~~lw~ivkpfL~~~Tr~KI~~~~~~~~~e~L~k~Id~e~LP~~yGG~~~  371 (487)
                      +|+|+||+|..+|++++|||++.|++||+|..+   .+.|.+|||+++||..|||...
T Consensus       190 ~l~~~P~iF~~~wkiikpflDp~t~~Kv~F~~~---~~~l~~~~d~~~l~s~~GG~~~  244 (324)
T KOG1470|consen  190 LLVNAPWIFQPFWKIIKPFLDPKTASKVKFVEP---KDDLSEYFDESQLPSLFGGKLL  244 (324)
T ss_pred             hhcCChHHHHHHHHHhhhccChhhhceeEEecC---hhHHHhhCCccccchhhCCCcc
Confidence            999999999999999999999999999999986   4559999999999999999654

>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>smart00516 SEC14 Domain in homologues of a S Back     alignment and domain information
>cd00170 SEC14 Sec14p-like lipid-binding domain Back     alignment and domain information
>PF13897 GOLD_2: Golgi-dynamics membrane-trafficking Back     alignment and domain information
>KOG3878 consensus Protein involved in maintenance of Golgi structure and ER-Golgi transport [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A Back     alignment and domain information
>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>KOG3287 consensus Membrane trafficking protein, emp24/gp25L/p24 family [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1693 consensus emp24/gp25L/p24 family of membrane trafficking proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1692 consensus Putative cargo transport protein EMP24 (p24 protein family) [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF01105 EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro: IPR009038 The GOLD (for Golgi dynamics) domain is a protein module found in several eukaryotic Golgi and lipid-traffic proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query487
1aua_A296 Phosphatidylinositol Transfer Protein Sec14p From S 3e-20
1olm_E403 Supernatant Protein Factor In Complex With Rrr-Alph 8e-18
1olm_A403 Supernatant Protein Factor In Complex With Rrr-Alph 1e-17
3b74_A320 Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co 1e-16
3q8g_A320 Resurrection Of A Functional Phosphatidylinositol T 2e-16
1o6u_A403 The Crystal Structure Of Human Supernatant Protein 4e-15
4fmm_A360 Dimeric Sec14 Family Homolog 3 From Saccharomyces C 4e-12
1oip_A278 The Molecular Basis Of Vitamin E Retention: Structu 1e-10
1r5l_A262 Crystal Structure Of Human Alpha-tocopherol Transfe 3e-10
>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296 Back     alignment and structure 
Iteration: 1

 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 115/234 (49%), Gaps = 13/234 (5%)
Query: 161 DVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSIL-----DEDLEVDLSSAAYMNGV 215
           D  LL+FLRAR+F V  A EM +N  +WRK    D+IL     DE   +      Y +  
Sbjct: 52  DSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKT 111
Query: 216 DREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFKPGG--ISS 273
           D++G PV +   G     E+ + T  +EE+  + L W    + Q       +  G  + +
Sbjct: 112 DKDGRPVYFEELGAVNLHEMNKVT--SEERMLKNLVWEYESVVQYRLPACSRAAGHLVET 169
Query: 274 LLQINDLKNAPVLAKKELRVATKQAVDLLQNNYPEFVARNIIINAPFWYYALNALISPFL 333
              I DLK   + +   +    ++A  + QN YPE + +  IINAPF +     L  PFL
Sbjct: 170 SCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFL 229
Query: 334 TQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDFEFSKEGGAVSEI 387
              T SK  +   +   E LLK IPAE LPV++GG   +++ + SK G  +S+I
Sbjct: 230 DPVTVSKIFILGSSYQKE-LLKQIPAENLPVKFGG---KSEVDESKGGLYLSDI 279
>pdb|1OLM|E Chain E, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1OLM|A Chain A, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320 Back     alignment and structure
>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320 Back     alignment and structure
>pdb|1O6U|A Chain A, The Crystal Structure Of Human Supernatant Protein Factor Length = 403 Back     alignment and structure
>pdb|4FMM|A Chain A, Dimeric Sec14 Family Homolog 3 From Saccharomyces Cerevisiae Presents Some Novel Features Of Structure That Lead To A Surprising "dimer- Monomer" State Change Induced By Substrate Binding Length = 360 Back     alignment and structure
>pdb|1OIP|A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein Length = 278 Back     alignment and structure
>pdb|1R5L|A Chain A, Crystal Structure Of Human Alpha-tocopherol Transfer Protein Bound To Its Ligand Length = 262 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query487
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 8e-82
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 8e-63
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 2e-60
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 6e-31
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 4e-29
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 9e-04
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403 Back     alignment and structure
 Score =  258 bits (660), Expect = 8e-82
 Identities = 84/356 (23%), Positives = 146/356 (41%), Gaps = 39/356 (10%)

Query: 161 DVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSILDEDL--EVDLSSAAYMNGVDRE 218
           D  LL++LRAR F +  +  ML+  +++RK   ID+I+       +    +  M G D +
Sbjct: 35  DYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGMCGYDLD 94

Query: 219 GHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFK----PGGISSL 274
           G PV Y+I G  ++  L       +      LR ++R  E  +Q+   +       + ++
Sbjct: 95  GCPVWYDIIGPLDAKGLLFSASKQD-----LLRTKMRECELLLQECAHQTTKLGRKVETI 149

Query: 275 LQINDLKNAPVL-AKKELRVATKQAVDLLQNNYPEFVARNIIINAPFWYYALNALISPFL 333
             I D +   +    K    A  + + + + NYPE + R  ++ AP  +     LI PFL
Sbjct: 150 TIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFL 209

Query: 334 TQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDFEFS-----KEGGAVSE-- 386
           ++ T+ K +V   A   E LLK+I  +++PV+YGG   + D           GG +    
Sbjct: 210 SEDTRKKIMVL-GANWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPRKY 268

Query: 387 -------------ITLKAGSTETIEIQAPEIGTTITWDLTVLGWEVSY----KEEFVPTD 429
                        + +  GS+  +E +    G  + W     G +V +    K +     
Sbjct: 269 YVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGADVGFGIFLKTKMGERQ 328

Query: 430 EGSYTIIVQKGKKMGSHEGPIRNTFKNNEAGKLVLTIDNASS--KKKRVLYRYKTK 483
                  V   ++  SH  P   T   ++ G  VL  DN  S    K+V +  +  
Sbjct: 329 RAGEMTEVLPNQRYNSHLVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVL 384
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296 Back     alignment and structure
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320 Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316 Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query487
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 100.0
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 100.0
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 100.0
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 100.0
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 100.0
3pg7_A256 Neurofibromin; SEC lipid binding domain, PH domain 98.97
3peg_A290 Neurofibromin; SEC14 domain, pleckstrin homology d 98.76
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Back     alignment and structure
Probab=100.00  E-value=1.3e-68  Score=559.95  Aligned_cols=321  Identities=25%  Similarity=0.396  Sum_probs=277.7

Q ss_pred             CCHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCCCcccchhhhhhh--cceeecccCCCCCeEEEEeccccCchhhh
Q 011383          159 GIDVILLKFLRAREFKVNDALEMLKNTLQWRKGNKIDSILDEDLEVDLS--SAAYMNGVDREGHPVCYNIYGVFESDELY  236 (487)
Q Consensus       159 ~~D~~LLRFLrAr~fdv~~A~~~L~~~l~WRk~~~id~i~~~~~~~el~--~~~~~~G~Dk~GrPV~~~~~g~~d~~~l~  236 (487)
                      .+|.+||||||||+||+++|.+||+++++||+.++++.+.+...+..+.  ...+++|+|++||||+|+++|++|+++++
T Consensus        33 ~dD~~LlRFLrarkfdv~~A~~~l~~~l~wR~~~~~~~i~~~~~~~~~~~~~~~~~~g~Dk~GrpV~~~~~g~~d~~~l~  112 (403)
T 1olm_A           33 PDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLL  112 (403)
T ss_dssp             CCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTGGGGGGSCCCHHHHHHCCBEEEEECTTSCEEEEEECTTCCHHHHH
T ss_pred             CChhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCcccccCCHHHHHHhCCceeeccCCCcCEEEEEecCCCChHHhh
Confidence            6899999999999999999999999999999999999887522222232  23457899999999999999999999876


Q ss_pred             hhhcCChhhHHHHHHHHHHHHHHHHHhhcCC----CCCeeeeEEEEeCCCCCccchhh-HHHHHHHHHHHhccccccccc
Q 011383          237 QKTFGTEEKRGQFLRWRLRLMEQGIQKLDFK----PGGISSLLQINDLKNAPVLAKKE-LRVATKQAVDLLQNNYPEFVA  311 (487)
Q Consensus       237 ~~~~~~e~~~~~~lr~~i~~~E~~l~~l~~~----~~~i~~iv~IiDl~g~s~~~~~~-l~~~~k~ii~llq~~YPE~L~  311 (487)
                      +.     .+.++++|++++++|.+++.+..+    +.++.++++|+||+|+++.++.. ...+++.++.++|+|||+||+
T Consensus       113 ~~-----~~~~~~~r~~~~~~E~~~~~~~~~s~~~g~~v~~~~~I~D~~g~sl~~~~~~~~~~~k~~~~~lq~~YPerl~  187 (403)
T 1olm_A          113 FS-----ASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLK  187 (403)
T ss_dssp             TT-----SCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGGGGCHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred             cc-----CCHHHHHHHHHHHHHHHHHHHHhhHHhhCCcccceEEEEECCCCCHHHHhhHHHHHHHHHHHHHHhhCcHhhC
Confidence            54     246899999999999999876543    23578999999999999766543 357889999999999999999


Q ss_pred             eeEEEeCchHHHHHHHHhcccCChhhhcceEEeCCccchHHHhccCCCCCcccccCCcccC--CCCccccC---CC----
Q 011383          312 RNIIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRE--NDFEFSKE---GG----  382 (487)
Q Consensus       312 ~i~IINaP~~f~~lw~ivkpfL~~~Tr~KI~~~~~~~~~e~L~k~Id~e~LP~~yGG~~~~--~d~~~~~~---~~----  382 (487)
                      ++||||+||+|.++|++++|||+++|++||+|+++ ++.+.|.++||+++||.+|||++.+  +|+.|...   +|    
T Consensus       188 ~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~~~-~~~~~L~~~I~~~~LP~~yGG~~~~~~~~~~c~~~i~~gg~vp~  266 (403)
T 1olm_A          188 RLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGA-NWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPR  266 (403)
T ss_dssp             EEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCT-THHHHHTTTSCGGGSBGGGTSSBCCTTCCTTCTTTCBCCCCCCG
T ss_pred             eEEEEeCCHHHHHHHHHHHhhcCHhhhceEEEECh-hHHHHHHhhcChhhCchhhCCCcCCCCCCcccccccccCCCCCc
Confidence            99999999999999999999999999999999986 7888999999999999999999987  45666542   11    


Q ss_pred             -----------ceeEEEecCCCeEEEEEeecCCCceEEEEEEEcCcceEEEEEEecCC----C-CceEEEeecceecCCC
Q 011383          383 -----------AVSEITLKAGSTETIEIQAPEIGTTITWDLTVLGWEVSYKEEFVPTD----E-GSYTIIVQKGKKMGSH  446 (487)
Q Consensus       383 -----------~~~~v~VkaG~~~~v~i~v~e~gs~l~Wef~t~~~DI~Fgi~~~~~~----~-~~~~~iv~~~~r~~~~  446 (487)
                                 ..++++|++|++++|+|+|.++|++|.|+|+|++|||+|||+|.+..    + +.+++++ |..|+.||
T Consensus       267 ~~~~~~~~~~~~~~~~~V~~g~~~~v~~~v~~~g~~l~W~f~~~~~DI~F~v~~~~~~~~~~~~~~~~~v~-p~~r~~~~  345 (403)
T 1olm_A          267 KYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGADVGFGIFLKTKMGERQRAGEMTEVL-PNQRYNSH  345 (403)
T ss_dssp             GGCSCSSCCCCCSEEEEECTTCEEEEEEEECSTTCEEEEEEEESSSCEEEEEEEC----CCCCGGGSEEEE-EEEEECTT
T ss_pred             ccccCCCcccccceEEEEcCCCEEEEEEEEcCCCCEEEEEEEecCCcEEEEEEEecccccccCCCcceEEe-eeeeecCc
Confidence                       12559999999999999999999999999999999999999998532    2 4566665 68899999


Q ss_pred             cccccceEEcCcCcEEEEEEEcCCC--CceEEEEEEEeecCC
Q 011383          447 EGPIRNTFKNNEAGKLVLTIDNASS--KKKRVLYRYKTKNFS  486 (487)
Q Consensus       447 ~~p~~gs~~~~~~G~yvL~fDNs~S--~~Kkv~Y~~~v~~~~  486 (487)
                      .++++|+|+|++||+|+|+|||+||  ++|+|.|++.+++|+
T Consensus       346 ~~~~~G~~~~~~~G~y~l~fdNs~S~~~~k~l~y~v~v~~~~  387 (403)
T 1olm_A          346 LVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLLPD  387 (403)
T ss_dssp             TSCEEEEEECCSCEEEEEEEECTTCCCCSEEEEEEEEEECCC
T ss_pred             cccccCEEEcCCCeEEEEEEeccccceeceEEEEEEEEeCCc
Confidence            9999999999999999999999999  899999999999876
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Back     alignment and structure
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Back     alignment and structure
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 487
d1olma3199 c.13.1.1 (A:76-274) Supernatant protein factor (SP 2e-32
d1auaa2203 c.13.1.1 (A:97-299) C-terminal domain of phosphati 1e-31
d1olma2119 b.132.1.1 (A:275-393) Supernatant protein factor ( 4e-19
d1r5la2185 c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot 1e-17
d1auaa193 a.5.3.1 (A:4-96) N-terminal domain of phosphatidyl 5e-12
d1olma175 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), 1e-11
d1r5la166 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protei 6e-10
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (301), Expect = 2e-32
 Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 16/186 (8%)

Query: 209 AAYMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFK- 267
           +  M G D +G PV Y+I G  ++  L          +   LR ++R  E  +Q+   + 
Sbjct: 10  SGGMCGYDLDGCPVWYDIIGPLDAKGLLFSA-----SKQDLLRTKMRECELLLQECAHQT 64

Query: 268 ---PGGISSLLQINDLKNAPV-LAKKELRVATKQAVDLLQNNYPEFVARNIIINAPFWYY 323
                 + ++  I D +   +    K    A  + + + + NYPE + R  ++ AP  + 
Sbjct: 65  TKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFP 124

Query: 324 ALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQYGGFKRENDF-----EFS 378
               LI PFL++ T+ K +V       E LLK+I  +++PV+YGG   + D         
Sbjct: 125 VAYNLIKPFLSEDTRKKIMVLGA-NWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKI 183

Query: 379 KEGGAV 384
             GG +
Sbjct: 184 NYGGDI 189
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203 Back     information, alignment and structure
>d1olma2 b.132.1.1 (A:275-393) Supernatant protein factor (SPF), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 119 Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185 Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 93 Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 75 Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 66 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query487
d1olma3199 Supernatant protein factor (SPF), middle domain {H 100.0
d1auaa2203 C-terminal domain of phosphatidylinositol transfer 99.97
d1r5la2185 Alpha-tocopherol transfer protein {Human (Homo sap 99.95
d1olma2119 Supernatant protein factor (SPF), C-terminal domai 99.93
d1olma175 Supernatant protein factor (SPF), N-terminal domai 99.48
d1auaa193 N-terminal domain of phosphatidylinositol transfer 99.36
d1r5la166 Alpha-tocopherol transfer protein {Human (Homo sap 98.92
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-34  Score=271.37  Aligned_cols=163  Identities=26%  Similarity=0.412  Sum_probs=143.3

Q ss_pred             eecccCCCCCeEEEEeccccCchhhhhhhcCChhhHHHHHHHHHHHHHHHHHhhcCC----CCCeeeeEEEEeCCCCCcc
Q 011383          211 YMNGVDREGHPVCYNIYGVFESDELYQKTFGTEEKRGQFLRWRLRLMEQGIQKLDFK----PGGISSLLQINDLKNAPVL  286 (487)
Q Consensus       211 ~~~G~Dk~GrPV~~~~~g~~d~~~l~~~~~~~e~~~~~~lr~~i~~~E~~l~~l~~~----~~~i~~iv~IiDl~g~s~~  286 (487)
                      .+||+|++||||+|+++|++|++++++.     .+.++++++.++.+|.+++.+..+    +.+++++++|+||+|+++.
T Consensus        12 ~~~G~Dk~Grpv~~~r~g~~d~~~l~~~-----~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~v~~~~~I~Dl~g~s~~   86 (199)
T d1olma3          12 GMCGYDLDGCPVWYDIIGPLDAKGLLFS-----ASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLK   86 (199)
T ss_dssp             EEEEECTTSCEEEEEECTTCCHHHHHTT-----SCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGG
T ss_pred             ccccCCCCCCEEEEEecccCChHHhhcc-----CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccceEEEEEECCCCchh
Confidence            3789999999999999999999998764     346899999999999999876432    3567899999999999976


Q ss_pred             chhh-HHHHHHHHHHHhccccccccceeEEEeCchHHHHHHHHhcccCChhhhcceEEeCCccchHHHhccCCCCCcccc
Q 011383          287 AKKE-LRVATKQAVDLLQNNYPEFVARNIIINAPFWYYALNALISPFLTQRTKSKFVVARPAKVTETLLKYIPAEELPVQ  365 (487)
Q Consensus       287 ~~~~-l~~~~k~ii~llq~~YPE~L~~i~IINaP~~f~~lw~ivkpfL~~~Tr~KI~~~~~~~~~e~L~k~Id~e~LP~~  365 (487)
                      ++.. ...++++++.++|++||++++++||||+|++|+++|+++||||+++|++||+|+++ ++.+.|.++|++++||++
T Consensus        87 ~~~~~~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~~-~~~~~L~~~i~~~~lP~~  165 (199)
T d1olma3          87 HLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGA-NWKEVLLKHISPDQVPVE  165 (199)
T ss_dssp             GGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCT-THHHHHTTTSCGGGSBGG
T ss_pred             hhccccHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeCC-CCHHHHHHhCCHhhCCHH
Confidence            5544 36789999999999999999999999999999999999999999999999999985 678999999999999999


Q ss_pred             cCCcccCC--CCcccc
Q 011383          366 YGGFKREN--DFEFSK  379 (487)
Q Consensus       366 yGG~~~~~--d~~~~~  379 (487)
                      |||+|+|+  |+.|..
T Consensus       166 yGGt~~~~~~~~~~~~  181 (199)
T d1olma3         166 YGGTMTDPDGNPKCKS  181 (199)
T ss_dssp             GTSSBCCTTCCTTCTT
T ss_pred             hCCCCCCCCCChhhhc
Confidence            99999874  556644
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1olma2 b.132.1.1 (A:275-393) Supernatant protein factor (SPF), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure