Citrus Sinensis ID: 011397

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------
Protein Sequence
MGSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSKA
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEccEEEEEEccccHHHHHHHHHHccEEEEccccccHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHccccEEEEcccccHHHHHHHHHHcccccccccccccccEEEcccccHHHHHHHHHHHccccccccccccccEEEEccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccEEEcccccccccccccEEEcccccccccccccccccccccEEEccHHHHHHHHHccccccEEEEccccHHHHHHHHHHccccccccccHHHHHccccccccccccccccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEccccHHHHHHHHHHHHHHHccHccccHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccEEccccccEEEEEccccEEEEEEcccccccHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHccccEEEEEccccccccccccccccEEEEcccHHHHHHHHHHHHHHcccEEEEcccccccEEEccccHHHHHHHHHHHHHHHHcccEcccccEEEEEHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccEEEEcccccccEEEEcEEEEccccccHHHHHHHcccEEEEEccccHHHHHHHHccccHcHHHHEEHHcHHHHHHHHHHHcccEEEEcccccccccccccccccccccccHHHHHHHHHHHcEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mgseeetkkknEVFDAEAASLFVKELRgtfasgktksygWRVSQLKSLMKMLNEREPDIVDALRqdldkpelesSIYEVALLKTSIKSALKELKHwmtpekaktsittfpssaeivpepfgvvliispwnypffVGAIAAGnalvlkpsevapaSSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLelggkspvvfdsGINLKVACRRMImgkwgcnngqacispdhiittkdYAPKLLESLKNELEnfygknpleskdlsrivnSNHFARLSKlldddkvsgkivhggerdknklriaptllldvprdslimseeifgpllpiltvdkiedsfdiinsgtkPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVhslpfggvqesgmgayhgkfsfdvfshkkavlsrgfigdvpvryppytkgKLRLLKVLISGSLLGIIRALLGWSKA
Flexible Loop (DISEMBL)
mgseeetkkknevfdaEAASLFVKELrgtfasgktksygwrVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKtsittfpssaeiVPEPFGVVLIISPWNYPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAEtsalldqkwdKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKnpleskdlsrIVNSNHFARlsklldddkvsgkivhggerdknklriaptLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLsrgfigdvpvryppytKGKLRLLKVLISGSLLGIIRallgwska
Low Complexity Region (SEG)
MGSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPklleslknelenFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSKA
Disordered region (IsUnstruct)
*****************AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKM**********************SSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN******LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGW***
Disordered Region (DISOPRED)
*******************SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSKA
Disordered Region (DISEMBL)
***********EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSKA
Disordered Region (DISPRO)
*****ETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSK*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSKA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	487	2.2.26 [Sep-21-2011]
Q70DU8	484	Aldehyde dehydrogenase fa	yes	no	0.969	0.975	0.694	0.0
Q8W033	550	Aldehyde dehydrogenase fa	no	no	0.983	0.870	0.618	1e-174
Q8VXQ2	479	Aldehyde dehydrogenase OS	N/A	no	0.960	0.977	0.610	1e-173
Q70E96	484	Aldehyde dehydrogenase fa	no	no	0.946	0.952	0.440	1e-120
P11883	453	Aldehyde dehydrogenase, d	yes	no	0.882	0.949	0.460	1e-110
Q60HH8	485	Fatty aldehyde dehydrogen	N/A	no	0.934	0.938	0.429	1e-107
Q5XI42	468	Aldehyde dehydrogenase fa	no	no	0.905	0.942	0.431	1e-107
Q80VQ0	468	Aldehyde dehydrogenase fa	yes	no	0.905	0.942	0.429	1e-107
P51648	485	Fatty aldehyde dehydrogen	yes	no	0.907	0.911	0.436	1e-106
Q5RF60	485	Fatty aldehyde dehydrogen	yes	no	0.909	0.913	0.436	1e-106

>sp|Q70DU8|AL3H1_ARATH Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana GN=ALDH3H1 PE=2 SV=2

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/478 (69%), Positives = 404/478 (84%), Gaps = 6/478 (1%)

Query: 12  EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
           +VF +  AS  V ELR +F  G T+ Y WRV+QLK LM + +  EP+IV ALR DL KPE
Sbjct: 5   KVFGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE 64

Query: 72  LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
           LESS+YEV+LL+ SIK ALK+LK+WM PEKAKTS+TTFP+SAEIV EP GVVL+IS WNY
Sbjct: 65  LESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNY 124

Query: 132 PFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSAL 185
           PF       +GAI+AGNA+VLKPSE+APASS+LL KL+ +Y+D S++RVVEGAV ETSAL
Sbjct: 125 PFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSAL 184

Query: 186 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 245
           L+QKWDKI YTG+S++ R++MAAAAKHLTPV+LELGGKSPVV DS  +LKV  RR+I+GK
Sbjct: 185 LEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGK 244

Query: 246 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 305
           WGCNNGQAC+SPD+I+TTK+YAPKL++++K ELE FYGKNP+ESKD+SRIVNSNHF RLS
Sbjct: 245 WGCNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLS 304

Query: 306 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 365
           KLLD+ +VS KIV+GGE+D+  L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+S
Sbjct: 305 KLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEES 364

Query: 366 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 425
           FD+I S  KPLAAYLFT+NKKLK++F  TVSAGG+V+ND AVHLA+H+LPFGGV ESGMG
Sbjct: 365 FDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMG 424

Query: 426 AYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 483
           AYHGKFSFD FSHKKAVL R   GD  VRYPPY++GKLRLLK L+  ++  + + LLG
Sbjct: 425 AYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLG 482

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3

>sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2

 Score =  610 bits (1573), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 300/485 (61%), Positives = 381/485 (78%), Gaps = 6/485 (1%)

Query: 8   KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL 67
           K++   F  + A+L V ELR  F SG+TKSY WR+SQL+++ +M++E+E  I +AL QDL
Sbjct: 64  KEQASDFSGKEAALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKCITEALYQDL 123

Query: 68  DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
            KPELE+ + E++  K+S   A+KELK+WM PE  KTS+TTFPSSA+IV EP GVVL+IS
Sbjct: 124 SKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLVIS 183

Query: 128 PWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAE 181
            WN+PF       +GAIAAGNA+VLKPSE+APA+SSLLAKL  EY+D ++IRV+EG V E
Sbjct: 184 AWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTIRVIEGGVPE 243

Query: 182 TSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRM 241
           T+ALLDQKWDKI +TG +RVARI+MAAAA++LTPV+LELGGK P + DS +NL+VA RR+
Sbjct: 244 TTALLDQKWDKIFFTGGARVARIIMAAAARNLTPVVLELGGKCPALVDSDVNLQVAARRI 303

Query: 242 IMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHF 301
           I GKW CN+GQACI  D++ITTKD+A KL+++LK ELE F+G+N LESKDLSRIVNS HF
Sbjct: 304 IAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALESKDLSRIVNSFHF 363

Query: 302 ARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 361
            RL  +L ++ V+ KIVHGG   ++KL+I+PT+LLDVP  S +M EEIFGPLLPI+TV K
Sbjct: 364 KRLESMLKENGVANKIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGPLLPIITVQK 423

Query: 362 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQE 421
           IED F +I S  KPLAAYLFTNNK+L++QFV+ VSAGG+ INDT +H+ V  LPFGGV E
Sbjct: 424 IEDGFQVIRSKPKPLAAYLFTNNKELEKQFVQDVSAGGITINDTVLHVTVKDLPFGGVGE 483

Query: 422 SGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRAL 481
           SG+GAYHGKFS++ FSHKK VL R F GD  +RYPPYT  K  +LK L+S ++   I A 
Sbjct: 484 SGIGAYHGKFSYETFSHKKGVLYRSFSGDADLRYPPYTPKKKMVLKALLSSNIFAAILAF 543

Query: 482 LGWSK 486
            G+SK
Sbjct: 544 FGFSK 548

Involved in oxidative stress tolerance by detoxifying reactive aldehydes derived from lipid peroxidation.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q8VXQ2|ALDH_CRAPL Aldehyde dehydrogenase OS=Craterostigma plantagineum GN=ALDH PE=1 SV=1

 Score =  607 bits (1566), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 291/477 (61%), Positives = 372/477 (77%), Gaps = 9/477 (1%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           DAE     V  LR T+ SGKTKSY WRVSQLK+L+K+    + ++V+ALR DL KPE E+
Sbjct: 5   DAEGV---VDGLRRTYISGKTKSYEWRVSQLKALLKITTHHDKEVVEALRADLKKPEHEA 61

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF 134
            ++E+ ++  + KSALKEL  WM P+K KTS+ T+PSSAEIV EP GVVL+I+ WNYPF 
Sbjct: 62  YVHEIFMVSNACKSALKELHQWMKPQKVKTSLATYPSSAEIVSEPLGVVLVITAWNYPFL 121

Query: 135 ------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQ 188
                 +GAIAAGN +VLKPSE+APA+S+LLAKL+ +Y+D S+IRVVEGAV E  ALLDQ
Sbjct: 122 LALDPMIGAIAAGNCVVLKPSEIAPATSALLAKLLNQYVDTSAIRVVEGAVPEMQALLDQ 181

Query: 189 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 248
           +WDKI YTG+S+V +IV+++AAKHLTPV+LELGGK P V D+ I+LKVA RR+I  KW  
Sbjct: 182 RWDKIFYTGSSKVGQIVLSSAAKHLTPVVLELGGKCPTVVDANIDLKVAARRIISWKWSG 241

Query: 249 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 308
           N+GQ CISPD+IITT++ APKL++++K ELE+FYGK+PL+S+D+S I+N   F R++ LL
Sbjct: 242 NSGQTCISPDYIITTEENAPKLVDAIKCELESFYGKDPLKSQDMSSIINERQFERMTGLL 301

Query: 309 DDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 368
           DD KVS KIV+GG+ DK+ L+IAPT+LLDV  DS +MSEEIFGPLLPI+TV KIE+ + I
Sbjct: 302 DDKKVSDKIVYGGQSDKSNLKIAPTILLDVSEDSSVMSEEIFGPLLPIITVGKIEECYKI 361

Query: 369 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH 428
           I S  KPLAAYLFTN+KK  ++FV  VSAGG+ IND A+H     LPFGGV ESGMG+YH
Sbjct: 362 IASKPKPLAAYLFTNDKKRTEEFVSNVSAGGITINDIALHFLEPRLPFGGVGESGMGSYH 421

Query: 429 GKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 485
           GKFSFD FSHKK+VL R F G+V  RYPPY   KL  ++ ++ G + G+++A LGWS
Sbjct: 422 GKFSFDAFSHKKSVLKRSFGGEVAARYPPYAPWKLHFMEAILQGDIFGLLKAWLGWS 478

Oxidizes nonanal, propionaldehyde and acetaldehyde in vitro, in the following decreasing order of reactivity: nonanal, propionaldehyde, acetaldehyde.

Craterostigma plantagineum (taxid: 4153)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1 OS=Arabidopsis thaliana GN=ALDH3F1 PE=2 SV=2

 Score =  431 bits (1107), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/470 (44%), Positives = 308/470 (65%), Gaps = 9/470 (1%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           ++E+R TFASG+T+S  WR +Q+ ++ +M+ + E  I +AL QDL K   E+   E+ ++
Sbjct: 12  LREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTEAFRDELGVV 71

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
             +   A+  L  W  P+ +K  +  +P+  +++ EP+G VL++S WN+P        +G
Sbjct: 72  LRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPISLSLDPLIG 131

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           AIAAGN ++LK SE++P +S+ LAK +  Y+D  +I+V+EG     + LL  +WDKI +T
Sbjct: 132 AIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQHQWDKIFFT 191

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQA 253
           G+ ++ RI+MAAAA+HLTPV LELGGK P + D      N+K   +R+  GKWG  NGQA
Sbjct: 192 GSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWGSCNGQA 251

Query: 254 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 313
           CIS D+++  K +AP L++ LK  +++F+G+NP ES  LSRI N +H  RLS+LL D +V
Sbjct: 252 CISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRLLSDPRV 311

Query: 314 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 373
              IV+GG  D++KL + PT+LLD P DS IM+EEIFGP+LPI+TV  I++S  IIN+  
Sbjct: 312 QASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKP 371

Query: 374 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 433
           KPLA Y FTN++ LK + +   S+G +  ND  +     +LPFGGV ESG+G YHGK+SF
Sbjct: 372 KPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSF 431

Query: 434 DVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 483
           D FSH+KA++      D+  RYPP+   KL  +++    +   +I  +LG
Sbjct: 432 DCFSHEKAIMEGSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLMLG 481

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P11883|AL3A1_RAT Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3

 Score =  397 bits (1020), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/443 (46%), Positives = 284/443 (64%), Gaps = 13/443 (2%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           VK  R  F SGKT+S  +R+ QL++L +M+NE    I  AL  DL K E  S   EVA +
Sbjct: 8   VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 67

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
              + + +KEL  W   E    +  T      I  EP GVVL+I  WNYPF       VG
Sbjct: 68  LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 127

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           A+AAGNA++LKPSEV+   + LLA L+ +YMD +   VV+G V ET+ LL +++D I YT
Sbjct: 128 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 187

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           G++ V +IVMAAAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++
Sbjct: 188 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 246

Query: 257 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD+I+       +++E LK  L++FYG++  +S+D  RI+N  HF R+  L+D+ KV+  
Sbjct: 247 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 304

Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
             HGG  D++   IAPT+L+DV   S +M EEIFGP++PI+ V  +E++   IN   KPL
Sbjct: 305 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 362

Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A Y+F+NN+K+ ++ +   S+GG+  ND  VH+ V +LPFGGV  SGMGAYHGK SF+ F
Sbjct: 363 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 422

Query: 437 SHKKAVLSRGFIGDVP--VRYPP 457
           SH+++ L +  + +     RYPP
Sbjct: 423 SHRRSCLVKSLLNEEAHKARYPP 445

ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

>sp|Q60HH8|AL3A2_MACFA Fatty aldehyde dehydrogenase OS=Macaca fascicularis GN=ALDH3A2 PE=2 SV=1

 Score =  389 bits (999), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/480 (42%), Positives = 298/480 (62%), Gaps = 25/480 (5%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           V+ +R  F SG+++   +R+ QL++L +M+ ERE DI+ A+  DL K EL +   EV  +
Sbjct: 5   VQRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLCKSELNAYSQEVITV 64

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
              I   L+ L  W+T +  K ++ T    A I P+P GVVLII  WNYPF       +G
Sbjct: 65  LGEIDFMLENLPEWVTAKPVKKNLLTMMDEAYIQPQPLGVVLIIGAWNYPFVLIIQPLIG 124

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           AIAAGNA+++KPSE++  ++ ++AKL+ +Y+D     V+ G V ET+ LL Q++D I YT
Sbjct: 125 AIAAGNAVIIKPSELSENTAKIVAKLLPQYLDQDLYVVINGGVEETTELLKQRFDHIFYT 184

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           GN+ V +IVM AAAKHLTPV LELGGKSP   D   +L + CRR+  GK+  N GQ CI+
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQTCIA 243

Query: 257 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD+I+       +++  +K  ++ FYG+N  ES D  RI+N  HF R+  LL+  K++  
Sbjct: 244 PDYILCEASLQSQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIA-- 301

Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
              GGE D+    IAPT+L DV   + +M EEIFGP+LPI+ V  ++++ D IN   KPL
Sbjct: 302 --LGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPVLPIVPVKNVDEATDFINEREKPL 359

Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A Y+F++N KL ++ ++  S+GG+  ND  +H  ++S PFGGV  SGMGAYHGK SFD F
Sbjct: 360 ALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFTLNSFPFGGVGSSGMGAYHGKHSFDTF 419

Query: 437 SHKKAVLSRGFI--GDVPVRYPPYTK-----GKLRLLKV-------LISGSLLGIIRALL 482
           SH++  L +     G   +RYPP ++     GK  LL+        L+  + LGI+ A+L
Sbjct: 420 SHQRPCLLKSLKREGANKLRYPPNSQSKVDWGKFFLLRRFNKEKLGLLVLTFLGIVAAVL 479

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q5XI42|AL3B1_RAT Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus GN=Aldh3b1 PE=2 SV=1

 Score =  389 bits (999), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/454 (43%), Positives = 286/454 (62%), Gaps = 13/454 (2%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           +++LR  F +G+T+S  +R +QL+ L   L + +  + +AL QDL K   ES + E+A+ 
Sbjct: 8   LQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESEVSEIAIS 67

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
           +  +  AL+ L+ WM  EK   ++ T   SA I  EPFG+VLII PWNYP        VG
Sbjct: 68  QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNLTLVPLVG 127

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           AIAAGN +VLKPSE++ A+  +LA+++  Y+D S   VV G   ET  LL+ ++D I +T
Sbjct: 128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHRFDYIFFT 187

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           GN+ V +IVMAAAAKHLTP+ LELGGK+P   D   + +    R+   ++  N GQ C++
Sbjct: 188 GNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRY-FNAGQTCVA 246

Query: 257 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD+++ +++   +L+ +L+N +  FYG NP  S +L RI+N  HF RL  LL      G+
Sbjct: 247 PDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLG----CGR 302

Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
           +  GG+ D+ +  IAPT+L+DV     +M EEIFGP+LP++TV  ++++ + IN   KPL
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEAIEFINRREKPL 362

Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A Y F+   ++ +Q +   S+GG   ND  +H+ + SLPFGGV  SGMG YHGKFSFD F
Sbjct: 363 ALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGRYHGKFSFDTF 422

Query: 437 SHKKAVLSR--GFIGDVPVRYPPYTKGKLRLLKV 468
           S+++A L R  G      +RYPPYT   LR+L V
Sbjct: 423 SNQRACLLRSPGMEKINDLRYPPYTSRNLRVLLV 456

Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

>sp|Q80VQ0|AL3B1_MOUSE Aldehyde dehydrogenase family 3 member B1 OS=Mus musculus GN=Aldh3b1 PE=2 SV=1

 Score =  387 bits (995), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/454 (42%), Positives = 286/454 (62%), Gaps = 13/454 (2%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           +++LR  F  G+T+S  +R +QL+ L   L + +  + +AL QDL K   E+ + E+A+ 
Sbjct: 8   LQQLREAFKEGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFEAEVSEIAIS 67

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
           +  +  AL+ L+ WM  EK   ++ T   SA I  EPFG+VLII PWNYP        VG
Sbjct: 68  QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPINLTLVPLVG 127

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           AIAAGN +VLKPSE++ A+  +LA+++  Y+D S   VV G   ET  LL+ K+D I +T
Sbjct: 128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFTVVLGGRQETGQLLEHKFDYIFFT 187

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           GN+ V +IVMAAAAKHLTP+ LELGGK+P   D   + ++   R+   ++  N GQ C++
Sbjct: 188 GNAYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQIVANRVAWFRY-FNAGQTCVA 246

Query: 257 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD+I+ +++   +L+ +L+N +  FYG NP  S +L RI+N  HF RL  LL      G+
Sbjct: 247 PDYILCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFKRLQGLLG----CGR 302

Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
           +  GG+ D+ +  IAPT+L+DV     +M EEIFGP+LP++TV  ++++ + +N   KPL
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRSLDEAIEFMNRREKPL 362

Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A Y F+   ++ +Q +   S+GG   ND  +H+ + SLPFGGV  SGMG YHGKFSFD F
Sbjct: 363 ALYAFSKRSQVIKQVLARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGRYHGKFSFDTF 422

Query: 437 SHKKAVLSR--GFIGDVPVRYPPYTKGKLRLLKV 468
           S+++A L R  G      +RYPPY+   LR+L V
Sbjct: 423 SNQRACLLRSPGMEKINDLRYPPYSSRNLRVLLV 456

Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 5

>sp|P51648|AL3A2_HUMAN Fatty aldehyde dehydrogenase OS=Homo sapiens GN=ALDH3A2 PE=1 SV=1

 Score =  387 bits (993), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/460 (43%), Positives = 287/460 (62%), Gaps = 18/460 (3%)

Query: 21  LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80
           L V+ +R  F SG+++   +R+ QL++L +M+ ERE DI+ A+  DL K E      EV 
Sbjct: 3   LEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQEVI 62

Query: 81  LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------F 134
            +   I   L+ L  W+T +  K ++ T    A I P+P GVVLII  WNYPF       
Sbjct: 63  TVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPL 122

Query: 135 VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKIC 194
           +GAIAAGNA+++KPSE++  ++ +LAKL+ +Y+D     V+ G V ET+ LL Q++D I 
Sbjct: 123 IGAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIF 182

Query: 195 YTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 254
           YTGN+ V +IVM AAAKHLTPV LELGGKSP   D   +L + CRR+  GK+  N GQ C
Sbjct: 183 YTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQTC 241

Query: 255 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVS 314
           I+PD+I+       +++  +K  ++ FYG+N  ES D  RI+N  HF R+  LL+  K++
Sbjct: 242 IAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIA 301

Query: 315 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 374
                GGE D+    IAPT+L DV   + +M EEIFGP+LPI+ V  ++++ + IN   K
Sbjct: 302 ----FGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEAINFINEREK 357

Query: 375 PLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFD 434
           PLA Y+F++N KL ++ ++  S+GG+  ND  +H  ++S PFGGV  SGMGAYHGK SFD
Sbjct: 358 PLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFTLNSFPFGGVGSSGMGAYHGKHSFD 417

Query: 435 VFSHKKAVLSRGFI--GDVPVRYPPYTK-----GKLRLLK 467
            FSH++  L +     G   +RYPP ++     GK  LLK
Sbjct: 418 TFSHQRPCLLKSLKREGANKLRYPPNSQSKVDWGKFFLLK 457

Catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Active on a variety of saturated and unsaturated aliphatic aldehydes between 6 and 24 carbons in length.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q5RF60|AL3A2_PONAB Fatty aldehyde dehydrogenase OS=Pongo abelii GN=ALDH3A2 PE=2 SV=1

 Score =  386 bits (992), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/461 (43%), Positives = 287/461 (62%), Gaps = 18/461 (3%)

Query: 20  SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEV 79
            L V+ +R  F SG+++   +R+ QL++L +M+ ERE DI+ A+  DL K E      EV
Sbjct: 2   ELEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLCKSEFNVYSQEV 61

Query: 80  ALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------ 133
             +   I   L+ L  W+T +  K ++ T    A I P+P GVVLII  WNYPF      
Sbjct: 62  ITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQP 121

Query: 134 FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKI 193
            +GAIAAGNA+++KPSE++  ++ +LAKL+ +Y+D     V+ G V ET+ LL Q++D I
Sbjct: 122 LIGAIAAGNAVIIKPSELSENTAKMLAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHI 181

Query: 194 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 253
            YTGN+ V +IVM AAAKHLTPV LELGGKSP   D   +L + CRR+  GK+  N GQ 
Sbjct: 182 FYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQT 240

Query: 254 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 313
           CI+PD+I+       +++  +K  ++ FYG+N  ES D  RI+N  HF R+  LL+  K+
Sbjct: 241 CIAPDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKI 300

Query: 314 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 373
           +     GGE D+    IAPT+L DV   + +M EEIFGP+LPI+ V  ++++ + IN   
Sbjct: 301 A----FGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEAINFINERE 356

Query: 374 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 433
           KPLA Y+F++N KL ++ ++  S+GG+  ND  +H  ++S PFGGV  SGMGAYHGK SF
Sbjct: 357 KPLALYVFSHNHKLIKRMIDETSSGGVTGNDVIMHFMLNSFPFGGVGSSGMGAYHGKHSF 416

Query: 434 DVFSHKKAVLSRGFI--GDVPVRYPPYTK-----GKLRLLK 467
           D FSH++  L +     G   +RYPP ++     GK  LLK
Sbjct: 417 DTFSHQRPCLLKSLKREGANKLRYPPNSQSKVDWGKFFLLK 457

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	487
224082306	488	predicted protein [Populus trichocarpa]	0.989	0.987	0.751	0.0
217074984	488	unknown [Medicago truncatula]	0.983	0.981	0.758	0.0
255558654	495	Aldehyde dehydrogenase, putative [Ricinu	0.995	0.979	0.747	0.0
356503028	496	PREDICTED: aldehyde dehydrogenase family	0.975	0.957	0.765	0.0
356552695	496	PREDICTED: aldehyde dehydrogenase family	0.981	0.963	0.760	0.0
357463521	495	Aldehyde dehydrogenase family 3 member H	0.991	0.975	0.700	0.0
224066815	480	predicted protein [Populus trichocarpa]	0.971	0.985	0.741	0.0
356552697	487	PREDICTED: aldehyde dehydrogenase family	0.977	0.977	0.751	0.0
442736187	492	fatty aldehyde dehydrogenase [Simmondsia	0.967	0.957	0.731	0.0
449449751	484	PREDICTED: aldehyde dehydrogenase family	0.971	0.977	0.726	0.0

>gi|224082306|ref|XP_002306641.1| predicted protein [Populus trichocarpa] gi|222856090|gb|EEE93637.1| predicted protein [Populus trichocarpa]

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/491 (75%), Positives = 427/491 (86%), Gaps = 9/491 (1%)

Query: 1   MGSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV 60
           M ++EE   +N VFD EAA++  KELR  FASGKT+SY WR+SQLKS++KM +E E DIV
Sbjct: 1   MATKEE---ENTVFDVEAANVLTKELRDVFASGKTRSYEWRISQLKSIVKMCDEHEEDIV 57

Query: 61  DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
           DALRQDL KP+LES +YE+ ++K S   A+KELKHWM PEKAKTS+TTFPSSAEIV EP 
Sbjct: 58  DALRQDLSKPQLESIVYELTMVKNSCTLAIKELKHWMMPEKAKTSLTTFPSSAEIVSEPL 117

Query: 121 GVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV 174
           G VLIIS WNYPF       +GAIAAGNA+VLKPSEVAPA+SSLLAKL+ EY+D SSI+V
Sbjct: 118 GAVLIISAWNYPFLLSMDPLIGAIAAGNAMVLKPSEVAPATSSLLAKLLPEYLDCSSIKV 177

Query: 175 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 234
           VEGAV+ETSALL+QKWDKI YTGN RV RIVMAAAAKHLTPV+LELGGKSPVV DSGI++
Sbjct: 178 VEGAVSETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSGIDI 237

Query: 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSR 294
           ++A RR+I+GKWGCNNGQACISPD+IITTKD A KL++SLK ELE FYGKNPLESKDLSR
Sbjct: 238 QIATRRIIVGKWGCNNGQACISPDYIITTKDCAEKLVDSLKKELEAFYGKNPLESKDLSR 297

Query: 295 IVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
           IVNSNHF+RL+KLLD+DKVSGKIV+GGERD+  LRIAPT+LL VP++SLIM EEIFGPLL
Sbjct: 298 IVNSNHFSRLTKLLDEDKVSGKIVYGGERDEANLRIAPTILLGVPQNSLIMKEEIFGPLL 357

Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
           PILTV KIEDSFDII SGTKPLAAYLFTNNKKLK+QF+ +VSAGG+VINDT +HLAVHS+
Sbjct: 358 PILTVSKIEDSFDIIKSGTKPLAAYLFTNNKKLKEQFLMSVSAGGVVINDTTLHLAVHSV 417

Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSL 474
           PFGGV ESGMG+YHGKFSFD F+HKKAV+ R F+GD  VRYPPYT GKLRL+K LI+G++
Sbjct: 418 PFGGVGESGMGSYHGKFSFDAFTHKKAVVYRSFVGDASVRYPPYTLGKLRLMKALITGNV 477

Query: 475 LGIIRALLGWS 485
             I+R LLG S
Sbjct: 478 WTILRTLLGMS 488

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074984|gb|ACJ85852.1| unknown [Medicago truncatula]

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/485 (75%), Positives = 416/485 (85%), Gaps = 6/485 (1%)

Query: 7   TKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQD 66
           +K   +VFD + AS  VK+LR TF SGKT+SY W+VSQLK+L+++  + E +IV+AL  D
Sbjct: 4   SKLNKKVFDLKEASTTVKDLRITFDSGKTRSYEWKVSQLKALLELTEKHEKEIVEALYSD 63

Query: 67  LDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLII 126
           L K E ES I EV +LK S K+ALKELKHWM PEK KTSITTFPSSAEIV EPFGVVL+I
Sbjct: 64  LSKSEAESFIQEVGMLKNSCKTALKELKHWMAPEKVKTSITTFPSSAEIVSEPFGVVLVI 123

Query: 127 SPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVA 180
           S WNYPF       +GAIAAGNA+VLKPSE+APA+SSLLAKL+GEYMD SSIRVVEGAV 
Sbjct: 124 SAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGEYMDNSSIRVVEGAVD 183

Query: 181 ETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRR 240
           ETSALL QKWDKI YTGN RVARIVMAAAAKHLTPV+LELGGKSPVV DS INL+VA RR
Sbjct: 184 ETSALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPVVVDSNINLQVAARR 243

Query: 241 MIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNH 300
           +I GKWGCNNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSRIVNSNH
Sbjct: 244 IIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKTELEQFYGKNPLESKDLSRIVNSNH 303

Query: 301 FARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 360
           F RL +LLDDDKVSGKIVHGGE+DK+KLRI+PT+LLDVPRDSLIMSEEIFGPLLPI+TVD
Sbjct: 304 FDRLIRLLDDDKVSGKIVHGGEKDKSKLRISPTVLLDVPRDSLIMSEEIFGPLLPIITVD 363

Query: 361 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 420
           K+++SFD+INS  KPLAAY+FTNN KLK+QFV+TVSAGGLVI+DT +HLAVH+LPFGGV 
Sbjct: 364 KLDESFDVINSAPKPLAAYIFTNNNKLKEQFVKTVSAGGLVIDDTTIHLAVHTLPFGGVG 423

Query: 421 ESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRA 480
           ESG+GAYHGKFSFD FSHKKAVL R F GD  +RYPPYT  K RL+K L+ G  L IIRA
Sbjct: 424 ESGVGAYHGKFSFDAFSHKKAVLYRSFFGDASIRYPPYTSTKTRLMKALMGGGFLAIIRA 483

Query: 481 LLGWS 485
           L G S
Sbjct: 484 LFGRS 488

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558654|ref|XP_002520352.1| Aldehyde dehydrogenase, putative [Ricinus communis] gi|223540571|gb|EEF42138.1| Aldehyde dehydrogenase, putative [Ricinus communis]

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/492 (74%), Positives = 416/492 (84%), Gaps = 7/492 (1%)

Query: 2   GSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVD 61
           G   E +K   +FD E  S  +KELRG+F SGKT+SY WRV+Q+KSL+K+ +  E +IVD
Sbjct: 3   GGNNEEEKAVMLFDVEEGSSMMKELRGSFGSGKTRSYEWRVTQIKSLVKLCDFHEKEIVD 62

Query: 62  ALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFG 121
           ALR DL KPELES++YE+ +LK S + ALKELKHWM PEKAKTSI TFPS+AEIVPEPFG
Sbjct: 63  ALRLDLSKPELESTVYEIGMLKNSCRVALKELKHWMRPEKAKTSIATFPSAAEIVPEPFG 122

Query: 122 VVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVV 175
           VVLIIS WNYPF       +GAIAAGNA+VLKPSE+APA+SSLLAKLV  Y+D S IRV+
Sbjct: 123 VVLIISAWNYPFLLSLDPLIGAIAAGNAVVLKPSEIAPATSSLLAKLVTAYLDSSCIRVI 182

Query: 176 EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL- 234
           EGAVAETSALL+QKWDKI YTGN RV RIVMAAAAKHLTPV+LELGGKSPVV DSGINL 
Sbjct: 183 EGAVAETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVIDSGINLL 242

Query: 235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSR 294
             A  R+I GKWGCNNGQACISPD+IITTKDYAPKL+++LK ELE FYG+NPL SKDLSR
Sbjct: 243 ASALLRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKQELERFYGENPLVSKDLSR 302

Query: 295 IVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
           IVNSNHF+RL KLLD+DKVSGKIVHGGERD+  L+IAPT+L+DVP+DSLIM+EEIFGPLL
Sbjct: 303 IVNSNHFSRLIKLLDEDKVSGKIVHGGERDEANLKIAPTILMDVPQDSLIMNEEIFGPLL 362

Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
           PI+ V+KIE+SFD+INS TKPLAAYLFTN KKLKQQFV  VSAGGLV+NDT VHLAVH+L
Sbjct: 363 PIVMVNKIEESFDLINSRTKPLAAYLFTNKKKLKQQFVTCVSAGGLVVNDTTVHLAVHTL 422

Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSL 474
           PFGGV ESG GAYHGKFSFD FSHKKAVL R F GD  +RYPPYTKGKLRL+K LI G +
Sbjct: 423 PFGGVGESGTGAYHGKFSFDAFSHKKAVLYRSFTGDAAIRYPPYTKGKLRLMKALIGGGI 482

Query: 475 LGIIRALLGWSK 486
             II AL GW K
Sbjct: 483 WSIISALFGWGK 494

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503028|ref|XP_003520314.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Glycine max]

 Score =  752 bits (1941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/481 (76%), Positives = 417/481 (86%), Gaps = 6/481 (1%)

Query: 10  KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK 69
           KN  FDAEAAS  V ELR  FAS KT+SY WR+SQL +L K++   E +IVDALR DL K
Sbjct: 16  KNTAFDAEAASRLVNELRRNFASNKTRSYEWRLSQLNALEKLVVVHEQEIVDALRNDLGK 75

Query: 70  PELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPW 129
           P LE+  YE+A+LK S + ALKELKHWMTPEK KTSI TFPSSAEIV EP GVVL+IS W
Sbjct: 76  PPLETVAYEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVISAW 135

Query: 130 NYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETS 183
           NYPF       VGAIAAGNA+VLKPSE+APA+SSLLAKL+G+Y+D S IRVVEGAV ETS
Sbjct: 136 NYPFLLSLDPVVGAIAAGNAVVLKPSEIAPATSSLLAKLIGDYLDNSCIRVVEGAVDETS 195

Query: 184 ALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIM 243
           ALL QKWDKI YTGN RVARIVMAAA+KHLTPV+LELGGKSPVV DS INLKVA RR+I 
Sbjct: 196 ALLQQKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRIIA 255

Query: 244 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFAR 303
           GKWG NNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSR+VNSNHF R
Sbjct: 256 GKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRVVNSNHFNR 315

Query: 304 LSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE 363
           L+KLLDDDKVSGKIV+GG++D+NKL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVDK+E
Sbjct: 316 LTKLLDDDKVSGKIVYGGQKDENKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVDKLE 375

Query: 364 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESG 423
           +SFD+INSG KPLAAY+FTNNKKLK+QFV T+SAGGLV+NDT +HLAVH+LPFGGV ESG
Sbjct: 376 ESFDVINSGPKPLAAYIFTNNKKLKEQFVMTISAGGLVVNDTTLHLAVHTLPFGGVGESG 435

Query: 424 MGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 483
           +GAYHGKFSF+ FSHKKAVL R FIGD PVRYPPYT  K+RLLK +I G + GI+RAL G
Sbjct: 436 VGAYHGKFSFEAFSHKKAVLYRKFIGDAPVRYPPYTNTKMRLLKAIIGGGIHGIVRALFG 495

Query: 484 W 484
           W
Sbjct: 496 W 496

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552695|ref|XP_003544698.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 1 [Glycine max]

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/484 (76%), Positives = 419/484 (86%), Gaps = 6/484 (1%)

Query: 7   TKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQD 66
           T  K   FDA AAS  V ELRG FASGKT+SY WR+ QL ++ K++ + E +IVDALR D
Sbjct: 13  TSSKKSAFDALAASRLVTELRGNFASGKTRSYEWRLLQLNAIAKLVVDHEQEIVDALRND 72

Query: 67  LDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLII 126
           L KP LE+  YE+A+LK S + ALKELKHWMTPEK KTSI TFPSSAEIV EP GVVL+I
Sbjct: 73  LGKPPLETVAYEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVI 132

Query: 127 SPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVA 180
           S WNYPF       +GAIAAGNA+VLKPSE+APA+SSLLAKL+G+Y+D S I+VVEGAV 
Sbjct: 133 SAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGDYLDNSCIKVVEGAVD 192

Query: 181 ETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRR 240
           ETSALL QKWDKI YTGN RVARIVMAAA+KHLTPV+LELGGKSPVV DS INLKVA RR
Sbjct: 193 ETSALLQQKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRR 252

Query: 241 MIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNH 300
           +I GKWG NNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSRIVNSNH
Sbjct: 253 IIAGKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNH 312

Query: 301 FARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 360
           F RL+KLLDDDKVSGKIV+GGE+D++KL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVD
Sbjct: 313 FNRLTKLLDDDKVSGKIVYGGEKDESKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVD 372

Query: 361 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 420
           KIE+SFD+INSG+KPLAAY+FTN KKLK+QFV T+SAGGLV+NDT +HLAVH+LPFGGV 
Sbjct: 373 KIEESFDVINSGSKPLAAYIFTNTKKLKEQFVMTISAGGLVVNDTTLHLAVHTLPFGGVG 432

Query: 421 ESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRA 480
           ESG+GAYHGKF+F+ FSHKKAVL R FIGD PVRYPPYT  K+RLLK LI G +LGIIRA
Sbjct: 433 ESGVGAYHGKFTFEAFSHKKAVLYRRFIGDAPVRYPPYTNTKMRLLKALIGGGILGIIRA 492

Query: 481 LLGW 484
           L GW
Sbjct: 493 LFGW 496

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463521|ref|XP_003602042.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] gi|355491090|gb|AES72293.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula]

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/494 (70%), Positives = 419/494 (84%), Gaps = 11/494 (2%)

Query: 3   SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDA 62
           S E+  +K  +FD EAAS  VKELR +F+SGKT+SY WR+SQ+K+L+KM++E++  I+DA
Sbjct: 2   SGEDHSQKKVMFDGEAASSLVKELRVSFSSGKTRSYEWRISQVKALLKMVDEQQDQIIDA 61

Query: 63  LRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGV 122
           LR DL KP LE+ +YE+ + K S +  LKELK WM PEKAKTS+TTFPSSAEIVPEP GV
Sbjct: 62  LRSDLAKPPLETVVYEIGMFKNSCEVTLKELKQWMAPEKAKTSVTTFPSSAEIVPEPLGV 121

Query: 123 VLIISPWNYPF-----------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           VL+IS WNYPF            VGAIAAGNA+VLKPSE+APASSSLLA L+G YMD SS
Sbjct: 122 VLVISAWNYPFRKSTFVLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLANLLGRYMDNSS 181

Query: 172 IRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 231
           +RVVEGAV ET+ALL QKWDKI YTGN +V RIVMAAAAKHLTPV+LELGGKSP V DS 
Sbjct: 182 VRVVEGAVDETTALLQQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPTVVDSN 241

Query: 232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKD 291
           +NL+V  RR+I GKW CNNGQACISPD++ITTKD+APKL+++LK ELE+F+GKNP+ES D
Sbjct: 242 VNLEVTARRIISGKWCCNNGQACISPDYVITTKDFAPKLVDALKKELESFFGKNPIESND 301

Query: 292 LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFG 351
           LSRIV+SNHFARL K+LDDDKVSGKIV+GGE+D++KLRIAPT++LD P+DSLIMSEEIFG
Sbjct: 302 LSRIVSSNHFARLIKMLDDDKVSGKIVYGGEKDESKLRIAPTIVLDAPQDSLIMSEEIFG 361

Query: 352 PLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV 411
           PLLPI+TV+K+E+SFD+IN+GTKPLAAYLFTN+ K K+QFV+ VSAGGL+INDT +HL V
Sbjct: 362 PLLPIITVNKLEESFDVINAGTKPLAAYLFTNDNKFKEQFVKNVSAGGLLINDTVLHLVV 421

Query: 412 HSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLIS 471
           H+LPFGGV +SGMGAYHGKFSFD F+H+KAVL RGF GD  +RYPPYT  K +L+K L++
Sbjct: 422 HTLPFGGVGDSGMGAYHGKFSFDAFTHRKAVLYRGFTGDASIRYPPYTDTKQKLMKALVA 481

Query: 472 GSLLGIIRALLGWS 485
           G + G++RAL GWS
Sbjct: 482 GDVTGVVRALFGWS 495

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066815|ref|XP_002302229.1| predicted protein [Populus trichocarpa] gi|222843955|gb|EEE81502.1| predicted protein [Populus trichocarpa]

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/479 (74%), Positives = 411/479 (85%), Gaps = 6/479 (1%)

Query: 13  VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL 72
           VFD EAA++  KELR  FASGKT+SY WR+SQLKS++KM +E E DIVDAL QDL KP+L
Sbjct: 2   VFDVEAANMLTKELRDVFASGKTRSYEWRISQLKSMIKMCDEHEEDIVDALHQDLSKPKL 61

Query: 73  ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYP 132
           ES +YE+ +LK S   A+KELK WM PEKAKTS+ TFPSSAEIVPEP GVVLIIS WNYP
Sbjct: 62  ESIVYEITMLKNSCTLAIKELKQWMMPEKAKTSLLTFPSSAEIVPEPLGVVLIISAWNYP 121

Query: 133 FF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL 186
           F       VGAIAAGNA+VLKPSE +PA+SSLLAKL+ EY+D+SSI+VVEGAV+ETSALL
Sbjct: 122 FLLSLDPLVGAIAAGNAMVLKPSEFSPATSSLLAKLLPEYLDISSIKVVEGAVSETSALL 181

Query: 187 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 246
           +QKWDKI YTGN  V RIVMAAAAKHLTPV+LELGGKSPVV DS I+L++A RR+I GKW
Sbjct: 182 EQKWDKIFYTGNGIVGRIVMAAAAKHLTPVVLELGGKSPVVVDSAIDLQIATRRLIAGKW 241

Query: 247 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSK 306
           GCNNGQAC+SPD+IITTKD A KL++SLK ELE FYGKNPLESKDLSRIVNS HF+RL+K
Sbjct: 242 GCNNGQACVSPDYIITTKDCADKLVDSLKKELETFYGKNPLESKDLSRIVNSKHFSRLTK 301

Query: 307 LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 366
           LLD+DKVS KIV+GGERD+  L+I+PT+L+DVP DSLIM EEIFGPLLPIL V KIEDSF
Sbjct: 302 LLDEDKVSRKIVYGGERDEANLKISPTILVDVPCDSLIMKEEIFGPLLPILIVSKIEDSF 361

Query: 367 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 426
           D+INSGTKPLAAYLFTNNKKLK+QFV +VSAGG+VIND A+HLA+H+LPFGGV ESG G+
Sbjct: 362 DMINSGTKPLAAYLFTNNKKLKEQFVMSVSAGGVVINDIAMHLAIHTLPFGGVGESGTGS 421

Query: 427 YHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 485
           YHGKFSFD FSHKKAVL R F+GD  +RYPPYT+GKLRL+K  ++ +   I+RAL G S
Sbjct: 422 YHGKFSFDAFSHKKAVLYRSFMGDAALRYPPYTRGKLRLMKAFMTSNFWTILRALFGRS 480

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552697|ref|XP_003544699.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 2 [Glycine max]

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/482 (75%), Positives = 415/482 (86%), Gaps = 6/482 (1%)

Query: 9   KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLD 68
           K   +FD+E A + VKELR TF  GKT+SY WR+SQLK+++K+  E E  I  AL  DL 
Sbjct: 6   KSKALFDSEEALMMVKELRVTFDCGKTRSYEWRISQLKAIIKLTEENEQQIYQALHSDLS 65

Query: 69  KPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISP 128
           K E E+ + E+A+LK S + ALKELKHWMTPEK KTSI TFPSSAEIV EP GVVL+IS 
Sbjct: 66  KCETEAFVQEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVISA 125

Query: 129 WNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET 182
           WNYPF       +GAIAAGNA+VLKPSE+APA+SSLLAKL+G+Y+D S I+VVEGAV ET
Sbjct: 126 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGDYLDNSCIKVVEGAVDET 185

Query: 183 SALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMI 242
           SALL QKWDKI YTGN RVARIVMAAA+KHLTPV+LELGGKSPVV DS INLKVA RR+I
Sbjct: 186 SALLQQKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRII 245

Query: 243 MGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFA 302
            GKWG NNGQACISPD+IITTKDYAPKL+++LK ELE FYGKNPLESKDLSRIVNSNHF 
Sbjct: 246 AGKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFN 305

Query: 303 RLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 362
           RL+KLLDDDKVSGKIV+GGE+D++KL+I+PT+LLDVPRDSLIM+EEIFGPLLPILTVDKI
Sbjct: 306 RLTKLLDDDKVSGKIVYGGEKDESKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTVDKI 365

Query: 363 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 422
           E+SFD+INSG+KPLAAY+FTN KKLK+QFV T+SAGGLV+NDT +HLAVH+LPFGGV ES
Sbjct: 366 EESFDVINSGSKPLAAYIFTNTKKLKEQFVMTISAGGLVVNDTTLHLAVHTLPFGGVGES 425

Query: 423 GMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALL 482
           G+GAYHGKF+F+ FSHKKAVL R FIGD PVRYPPYT  K+RLLK LI G +LGIIRAL 
Sbjct: 426 GVGAYHGKFTFEAFSHKKAVLYRRFIGDAPVRYPPYTNTKMRLLKALIGGGILGIIRALF 485

Query: 483 GW 484
           GW
Sbjct: 486 GW 487

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|442736187|gb|AGC65583.1| fatty aldehyde dehydrogenase [Simmondsia chinensis]

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/477 (73%), Positives = 409/477 (85%), Gaps = 6/477 (1%)

Query: 14  FDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELE 73
           FD EAA+  V ELR TFA+GKT+SY WRV+QL  ++KM+   E +IV+ALR DL+KPE E
Sbjct: 6   FDTEAAASTVTELRRTFAAGKTRSYEWRVAQLNGMIKMVENHEQEIVEALRLDLNKPEFE 65

Query: 74  SSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF 133
           S +YE+ LLK+S K ALKELK WM PEK KTS+TTFPSSAEIVPEP G+VL+IS WNYP 
Sbjct: 66  SILYEIMLLKSSCKVALKELKQWMMPEKVKTSLTTFPSSAEIVPEPLGIVLVISAWNYPL 125

Query: 134 F------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLD 187
                  VGAIAAGN +VLKPSE+APA+SS LAK V +YMD S+I+VVEG++ ETSALL+
Sbjct: 126 LLSLDPIVGAIAAGNVVVLKPSEIAPATSSFLAKFVEKYMDNSAIKVVEGSIPETSALLE 185

Query: 188 QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG 247
           QKW+KI YTGN RV RIVMAAAAKHLTPV+LELGGKSP + DS IN  VA RR+I GKWG
Sbjct: 186 QKWEKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPAIVDSNINTTVAARRIIAGKWG 245

Query: 248 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKL 307
           CNNGQACISPD+IITTKD+APKL+++LK ELE  YG  PLESKDLSRIVNSNHF RL++L
Sbjct: 246 CNNGQACISPDYIITTKDFAPKLIDTLKRELERCYGTEPLESKDLSRIVNSNHFDRLTRL 305

Query: 308 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD 367
           LD+DKVSG+IV GG+RD++KLRIAPT+L  VP+DSLIMSEEIFGPLLP++TVD++E+SFD
Sbjct: 306 LDEDKVSGRIVCGGQRDRDKLRIAPTVLQGVPQDSLIMSEEIFGPLLPVITVDRLEESFD 365

Query: 368 IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY 427
           +INS TKPLAAYLFTN KKLK +FV  VSAGGLVIND+A+HLAVH+LPFGGV ESGMG+Y
Sbjct: 366 LINSRTKPLAAYLFTNRKKLKHEFVSNVSAGGLVINDSALHLAVHTLPFGGVAESGMGSY 425

Query: 428 HGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGW 484
           HGKFSFDVFSHKKAVL R F+GD   RYPPYT+GKLRLLK L+SGS+LGII+AL+GW
Sbjct: 426 HGKFSFDVFSHKKAVLYRSFMGDAAARYPPYTQGKLRLLKALLSGSILGIIKALMGW 482

Source: Simmondsia chinensis

Species: Simmondsia chinensis

Genus: Simmondsia

Family: Simmondsiaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449751|ref|XP_004142628.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Cucumis sativus] gi|449500684|ref|XP_004161167.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Cucumis sativus]

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/479 (72%), Positives = 411/479 (85%), Gaps = 6/479 (1%)

Query: 13  VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL 72
           VFD EAA   V ELR ++ SGKT+SY WR +QLK+L+K++ E E  +V  +  DL KPE 
Sbjct: 6   VFDGEAAERVVTELRESYNSGKTRSYEWRENQLKNLLKLVCENEEVMVQTVNSDLHKPEF 65

Query: 73  ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYP 132
           E+  +E+ALLK S K A+KEL+ WM PEK K+SIT FPSSA IVPEPFGVVLIIS WNYP
Sbjct: 66  EAFAHEIALLKGSCKLAIKELRRWMAPEKVKSSITVFPSSAAIVPEPFGVVLIISAWNYP 125

Query: 133 FF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL 186
           F       VGAIAAGNA+VLKPSE++P +SSL+AKL+ +Y+D S+++VVEGAV ET ALL
Sbjct: 126 FLLSLDPVVGAIAAGNAVVLKPSEISPRTSSLMAKLLEKYLDTSAVKVVEGAVPETQALL 185

Query: 187 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 246
           +QKWDKI YTGN +V RIVMAAAAKHLTPV+LELGGKSPVV DS INL+VA RR+I GKW
Sbjct: 186 EQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPVVVDSKINLQVASRRIIAGKW 245

Query: 247 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSK 306
           GCNNGQACI+PD++ITTK++APKL+E +K ELE FYGKNPLE+KDLSRIVN+NHF RL++
Sbjct: 246 GCNNGQACIAPDYVITTKEFAPKLVECMKQELEKFYGKNPLETKDLSRIVNANHFDRLTR 305

Query: 307 LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF 366
           LLDDDK+SGKIVHGGE+DK+KL+IAPTLLLDVPRDSLIM+EEIFGPLLPILTVDK+EDSF
Sbjct: 306 LLDDDKISGKIVHGGEKDKSKLQIAPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSF 365

Query: 367 DIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 426
           DI+NSGTKPLAAYLFTNNKKLK++FV  +SAGG+ IN+TA+HL + +LPFGGV ESGMGA
Sbjct: 366 DIVNSGTKPLAAYLFTNNKKLKERFVACISAGGVAINETALHLTISTLPFGGVGESGMGA 425

Query: 427 YHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 485
           YHGKFSFD FSHKKAVL R F GD P+RYPPYTKGKLR+LK L+ G +L +IRALLGWS
Sbjct: 426 YHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLRILKALLGGGILALIRALLGWS 484

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	487
TAIR|locus:2205851	484	ALDH3H1 "AT1G44170" [Arabidops	0.969	0.975	0.682	1.6e-175
TAIR|locus:2116134	550	ALDH3I1 "AT4G34240" [Arabidops	0.983	0.870	0.604	4.9e-156
TAIR|locus:2122224	484	ALDH3F1 "AT4G36250" [Arabidops	0.944	0.950	0.437	1.9e-106
UNIPROTKB|E2RPP8	599	ALDH3A2 "Uncharacterized prote	0.909	0.739	0.438	4.1e-100
UNIPROTKB|D4A137	507	Aldh3a2 "Aldehyde dehydrogenas	0.909	0.873	0.447	1.7e-98
RGD|61866	484	Aldh3a2 "aldehyde dehydrogenas	0.909	0.915	0.447	2.2e-98
UNIPROTKB|P30839	484	Aldh3a2 "Fatty aldehyde dehydr	0.909	0.915	0.447	2.2e-98
UNIPROTKB|F1NH33	490	ALDH3A2 "Aldehyde dehydrogenas	0.936	0.930	0.434	5.2e-97
ZFIN|ZDB-GENE-040912-103	490	aldh3a2b "aldehyde dehydrogena	0.895	0.889	0.443	5.2e-97
RGD|2088	453	Aldh3a1 "aldehyde dehydrogenas	0.882	0.949	0.451	1.8e-96

TAIR|locus:2205851 ALDH3H1 "AT1G44170" [Arabidopsis thaliana (taxid:3702)]

 Score = 1705 (605.2 bits), Expect = 1.6e-175, P = 1.6e-175
 Identities = 326/478 (68%), Positives = 394/478 (82%)

Query:    12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
             +VF +  AS  V ELR +F  G T+ Y WRV+QLK LM + +  EP+IV ALR DL KPE
Sbjct:     5 KVFGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE 64

Query:    72 LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
             LESS+YEV+LL+ SIK ALK+LK+WM PEKAKTS+TTFP+SAEIV EP GVVL+IS WNY
Sbjct:    65 LESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNY 124

Query:   132 PFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSAL 185
             PF       +GAI+AGNA+VLKPSE+APASS+LL KL+ +Y+D S++RVVEGAV ETSAL
Sbjct:   125 PFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSAL 184

Query:   186 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 245
             L+QKWDKI YTG+S++ R++MAAAAKHLTPV+LELGGKSPVV DS  +LKV  RR+I+GK
Sbjct:   185 LEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGK 244

Query:   246 WGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLS 305
             WGCNNGQAC+SPD+I+TTK+YAP            FYGKNP+ESKD+SRIVNSNHF RLS
Sbjct:   245 WGCNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLS 304

Query:   306 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 365
             KLLD+ +VS KIV+GGE+D+  L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+S
Sbjct:   305 KLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEES 364

Query:   366 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 425
             FD+I S  KPLAAYLFT+NKKLK++F  TVSAGG+V+ND AVHLA+H+LPFGGV ESGMG
Sbjct:   365 FDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMG 424

Query:   426 AYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 483
             AYHGKFSFD FSHKKAVL R   GD  VRYPPY++GKLRLLK L+  ++  + + LLG
Sbjct:   425 AYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLG 482

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS;IDA

GO:0009536 "plastid" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0009269 "response to desiccation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2116134 ALDH3I1 "AT4G34240" [Arabidopsis thaliana (taxid:3702)]

 Score = 1521 (540.5 bits), Expect = 4.9e-156, P = 4.9e-156
 Identities = 293/485 (60%), Positives = 371/485 (76%)

Query:     8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL 67
             K++   F  + A+L V ELR  F SG+TKSY WR+SQL+++ +M++E+E  I +AL QDL
Sbjct:    64 KEQASDFSGKEAALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKCITEALYQDL 123

Query:    68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
              KPELE+ + E++  K+S   A+KELK+WM PE  KTS+TTFPSSA+IV EP GVVL+IS
Sbjct:   124 SKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLVIS 183

Query:   128 PWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAE 181
              WN+PF       +GAIAAGNA+VLKPSE+APA+SSLLAKL  EY+D ++IRV+EG V E
Sbjct:   184 AWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTIRVIEGGVPE 243

Query:   182 TSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRM 241
             T+ALLDQKWDKI +TG +RVARI+MAAAA++LTPV+LELGGK P + DS +NL+VA RR+
Sbjct:   244 TTALLDQKWDKIFFTGGARVARIIMAAAARNLTPVVLELGGKCPALVDSDVNLQVAARRI 303

Query:   242 IMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHF 301
             I GKW CN+GQACI  D++ITTKD+A             F+G+N LESKDLSRIVNS HF
Sbjct:   304 IAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALESKDLSRIVNSFHF 363

Query:   302 ARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 361
              RL  +L ++ V+ KIVHGG   ++KL+I+PT+LLDVP  S +M EEIFGPLLPI+TV K
Sbjct:   364 KRLESMLKENGVANKIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGPLLPIITVQK 423

Query:   362 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQE 421
             IED F +I S  KPLAAYLFTNNK+L++QFV+ VSAGG+ INDT +H+ V  LPFGGV E
Sbjct:   424 IEDGFQVIRSKPKPLAAYLFTNNKELEKQFVQDVSAGGITINDTVLHVTVKDLPFGGVGE 483

Query:   422 SGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRAL 481
             SG+GAYHGKFS++ FSHKK VL R F GD  +RYPPYT  K  +LK L+S ++   I A 
Sbjct:   484 SGIGAYHGKFSYETFSHKKGVLYRSFSGDADLRYPPYTPKKKMVLKALLSSNIFAAILAF 543

Query:   482 LGWSK 486
              G+SK
Sbjct:   544 FGFSK 548

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009536 "plastid" evidence=ISS

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0033721 "aldehyde dehydrogenase (NADP+) activity" evidence=IDA

TAIR|locus:2122224 ALDH3F1 "AT4G36250" [Arabidopsis thaliana (taxid:3702)]

 Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
 Identities = 206/471 (43%), Positives = 303/471 (64%)

Query:    23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
             ++E+R TFASG+T+S  WR +Q+ ++ +M+ + E  I +AL QDL K   E+   E+ ++
Sbjct:    12 LREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTEAFRDELGVV 71

Query:    83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
               +   A+  L  W  P+ +K  +  +P+  +++ EP+G VL++S WN+P        +G
Sbjct:    72 LRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPISLSLDPLIG 131

Query:   137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
             AIAAGN ++LK SE++P +S+ LAK +  Y+D  +I+V+EG     + LL  +WDKI +T
Sbjct:   132 AIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQHQWDKIFFT 191

Query:   197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQA 253
             G+ ++ RI+MAAAA+HLTPV LELGGK P + D      N+K   +R+  GKWG  NGQA
Sbjct:   192 GSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWGSCNGQA 251

Query:   254 CISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 313
             CIS D+++  K +AP            F+G+NP ES  LSRI N +H  RLS+LL D +V
Sbjct:   252 CISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRLLSDPRV 311

Query:   314 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 373
                IV+GG  D++KL + PT+LLD P DS IM+EEIFGP+LPI+TV  I++S  IIN+  
Sbjct:   312 QASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKP 371

Query:   374 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 433
             KPLA Y FTN++ LK + +   S+G +  ND  +     +LPFGGV ESG+G YHGK+SF
Sbjct:   372 KPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSF 431

Query:   434 DVFSHKKAVLSRGFIG-DVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 483
             D FSH+KA++  G +G D+  RYPP+   KL  +++    +   +I  +LG
Sbjct:   432 DCFSHEKAIME-GSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLMLG 481

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005737 "cytoplasm" evidence=ISM

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

UNIPROTKB|E2RPP8 ALDH3A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 972 (347.2 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
 Identities = 200/456 (43%), Positives = 282/456 (61%)

Query:    23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
             ++ +R  FASG+++   +R+ QL++L +M+ ERE DI++A+  DL K EL +   EV  +
Sbjct:    98 IQRVRAAFASGRSRPVRFRLQQLEALRRMVQEREKDILEAIAGDLCKSELNAYSQEVITV 157

Query:    83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
                +   L+ L  W+  + AK ++ T    A + PEP GVVLII  WNYPF       +G
Sbjct:   158 LGELDLVLENLPEWVAAKPAKKNLLTMLDEAYVQPEPLGVVLIIGAWNYPFVLTIQPLIG 217

Query:   137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
             AIAAGNA+++KPSE++  ++ +LA+L+  Y+D     V+ G V ET+ LL Q++D I YT
Sbjct:   218 AIAAGNAVIIKPSELSEKTAKILAELLPRYLDQDLYVVINGGVEETTELLKQRFDHILYT 277

Query:   197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
             GN+ V +IVM AAAKHLTPV LELGGKSP   D   +L +ACRR+  GK+  N GQ CI+
Sbjct:   278 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYVDKDCDLDIACRRITWGKY-MNCGQTCIA 336

Query:   257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
             PD+++                   FYG+N  ES D  RI+N  HF R+  LL+  K++  
Sbjct:   337 PDYVLCEPSLQNQIVQKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLEGQKIA-- 394

Query:   317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
                GGE D+    IAPT+L DV  +S +M EEIFGP+LPI+ V   +++   INS  KPL
Sbjct:   395 --FGGETDEATRYIAPTILSDVDPESRVMQEEIFGPILPIVPVKNADEAIKFINSREKPL 452

Query:   377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
             A Y+F++N KL +Q +   S+GG+  ND  +H  + SLPFGGV  SGMGAYHGK+SFD F
Sbjct:   453 AFYIFSHNDKLVRQMINGTSSGGVTANDVIMHFTLSSLPFGGVGSSGMGAYHGKYSFDTF 512

Query:   437 SHKKAVLSRGFI--GDVPVRYPPYTKGKLRLLKVLI 470
             SH++  L +     G   +RYPP ++ K+   K  I
Sbjct:   513 SHQRPCLLKSLKREGANKLRYPPNSQSKVDWAKFFI 548

GO:0052814 "medium-chain-aldehyde dehydrogenase activity" evidence=IEA

GO:0050061 "long-chain-aldehyde dehydrogenase activity" evidence=IEA

GO:0046577 "long-chain-alcohol oxidase activity" evidence=IEA

GO:0033306 "phytol metabolic process" evidence=IEA

GO:0008544 "epidermis development" evidence=IEA

GO:0007422 "peripheral nervous system development" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0006714 "sesquiterpenoid metabolic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

UNIPROTKB|D4A137 Aldh3a2 "Aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)]

 Score = 978 (349.3 bits), Expect = 1.7e-98, P = 1.7e-98
 Identities = 204/456 (44%), Positives = 284/456 (62%)

Query:    23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
             V+ LR TF SG+++   +R+ QL++L +M+ ERE DI+ A+  DL K EL +  +EV  +
Sbjct:     5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITI 64

Query:    83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
                I   L  L    +   AK ++ T    A + PEP GVVLII  WNYPF       VG
Sbjct:    65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVG 124

Query:   137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
             AIAAGNA ++KPSE++  ++ +LA+L+ +Y+D     +V G V ET+ LL Q++D I YT
Sbjct:   125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYT 184

Query:   197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
             GN+ V +IVM AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N GQ CI+
Sbjct:   185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIA 243

Query:   257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
             PD+I+                   FYG+N   S D  RI+N  HF R+  LL+  K++  
Sbjct:   244 PDYILCEASLQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA-- 301

Query:   317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
                GGE D+    IAPT+L DV  +S +M EEIFGP+LPI++V  +E++ + IN   KPL
Sbjct:   302 --FGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPL 359

Query:   377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
             A Y+F++N KL ++ ++  S+GG+  ND  +H  V+SLPFGGV  SGMGAYHGK+SFD F
Sbjct:   360 ALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTF 419

Query:   437 SHKKAVLSRGFIGDV--PVRYPPYTKGKLRLLKVLI 470
             SH++  L +G  G+    +RYPP ++ K+   K  +
Sbjct:   420 SHQRPCLLKGLKGESVNKLRYPPNSESKVSWSKFFL 455

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

RGD|61866 Aldh3a2 "aldehyde dehydrogenase 3 family, member A2" [Rattus norvegicus (taxid:10116)]

 Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
 Identities = 204/456 (44%), Positives = 284/456 (62%)

Query:    23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
             V+ LR TF SG+++   +R+ QL++L +M+ ERE DI+ A+  DL K EL +  +EV  +
Sbjct:     5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITI 64

Query:    83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
                I   L  L    +   AK ++ T    A + PEP GVVLII  WNYPF       VG
Sbjct:    65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVG 124

Query:   137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
             AIAAGNA ++KPSE++  ++ +LA+L+ +Y+D     +V G V ET+ LL Q++D I YT
Sbjct:   125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYT 184

Query:   197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
             GN+ V +IVM AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N GQ CI+
Sbjct:   185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIA 243

Query:   257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
             PD+I+                   FYG+N   S D  RI+N  HF R+  LL+  K++  
Sbjct:   244 PDYILCEASSQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA-- 301

Query:   317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
                GGE D+    IAPT+L DV  +S +M EEIFGP+LPI++V  +E++ + IN   KPL
Sbjct:   302 --FGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPL 359

Query:   377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
             A Y+F++N KL ++ ++  S+GG+  ND  +H  V+SLPFGGV  SGMGAYHGK+SFD F
Sbjct:   360 ALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTF 419

Query:   437 SHKKAVLSRGFIGDV--PVRYPPYTKGKLRLLKVLI 470
             SH++  L +G  G+    +RYPP ++ K+   K  +
Sbjct:   420 SHQRPCLLKGLKGESVNKLRYPPNSESKVSWSKFFL 455

GO:0000302 "response to reactive oxygen species" evidence=IDA

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=IDA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA;ISO

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005634 "nucleus" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0005777 "peroxisome" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO;IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA;ISO

GO:0006714 "sesquiterpenoid metabolic process" evidence=IEA;ISO

GO:0007417 "central nervous system development" evidence=IEA;ISO

GO:0007422 "peripheral nervous system development" evidence=IEA;ISO

GO:0008544 "epidermis development" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0033306 "phytol metabolic process" evidence=IEA;ISO

GO:0042406 "extrinsic to endoplasmic reticulum membrane" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0046292 "formaldehyde metabolic process" evidence=IDA

GO:0046577 "long-chain-alcohol oxidase activity" evidence=IEA;ISO

GO:0050061 "long-chain-aldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0052814 "medium-chain-aldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|P30839 Aldh3a2 "Fatty aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)]

 Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
 Identities = 204/456 (44%), Positives = 284/456 (62%)

Query:    23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
             V+ LR TF SG+++   +R+ QL++L +M+ ERE DI+ A+  DL K EL +  +EV  +
Sbjct:     5 VQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITI 64

Query:    83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
                I   L  L    +   AK ++ T    A + PEP GVVLII  WNYPF       VG
Sbjct:    65 LGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVG 124

Query:   137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
             AIAAGNA ++KPSE++  ++ +LA+L+ +Y+D     +V G V ET+ LL Q++D I YT
Sbjct:   125 AIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYT 184

Query:   197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
             GN+ V +IVM AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N GQ CI+
Sbjct:   185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIA 243

Query:   257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
             PD+I+                   FYG+N   S D  RI+N  HF R+  LL+  K++  
Sbjct:   244 PDYILCEASSQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA-- 301

Query:   317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
                GGE D+    IAPT+L DV  +S +M EEIFGP+LPI++V  +E++ + IN   KPL
Sbjct:   302 --FGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPL 359

Query:   377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
             A Y+F++N KL ++ ++  S+GG+  ND  +H  V+SLPFGGV  SGMGAYHGK+SFD F
Sbjct:   360 ALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTF 419

Query:   437 SHKKAVLSRGFIGDV--PVRYPPYTKGKLRLLKVLI 470
             SH++  L +G  G+    +RYPP ++ K+   K  +
Sbjct:   420 SHQRPCLLKGLKGESVNKLRYPPNSESKVSWSKFFL 455

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

UNIPROTKB|F1NH33 ALDH3A2 "Aldehyde dehydrogenase" [Gallus gallus (taxid:9031)]

 Score = 964 (344.4 bits), Expect = 5.2e-97, P = 5.2e-97
 Identities = 207/476 (43%), Positives = 292/476 (61%)

Query:    23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
             V   R  F+SG+++   +R+ QL++L +M+ E+E +I+ A+  DL K    +  +E+  +
Sbjct:     8 VGRARAAFSSGRSRPLEFRLQQLRNLQRMVQEKEQEILAAIGADLHKCGHNAYSHEIMGV 67

Query:    83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
                +  A+++L  W  P   K ++ T    A I PEP GVVL+I  WNYPF       +G
Sbjct:    68 LGELALAMEKLPSWAAPRPVKKNLLTLRDEAYINPEPLGVVLVIGAWNYPFVLVMQPLIG 127

Query:   137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
             AIAAGNA+V+KPSEV+  +S ++A ++ +Y+D     VV G V ET+ LL+Q++D I YT
Sbjct:   128 AIAAGNAVVVKPSEVSEHTSQMIANILPQYLDPELYPVVTGGVPETTELLEQRFDHILYT 187

Query:   197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
             GNS V +IVMAAAAKHLTPV LELGGKSP   D+  +L VACRR+  GK+  N GQ CI+
Sbjct:   188 GNSAVGKIVMAAAAKHLTPVTLELGGKSPCYIDTDCDLAVACRRIAWGKY-MNCGQTCIA 246

Query:   257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
             PD+++                   FYG++  +  D  RI+N  HF R+  LL+  K++  
Sbjct:   247 PDYVLCHPSIQSQVVENIKATLQEFYGEDVKKCPDYERIINKRHFKRIMNLLEGQKIA-- 304

Query:   317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
               HGGE D+    IAPT+L DV  +S +M EEIFGP+LPI++V  ++++ + IN   KPL
Sbjct:   305 --HGGETDEASCFIAPTILTDVSVESKVMEEEIFGPVLPIVSVKNVDEAIEFINRREKPL 362

Query:   377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
             A Y+F+NNKKL ++ +   S+GG+  ND  +H  + SLPFGGV  SGMGAYHGK SFD F
Sbjct:   363 ALYVFSNNKKLIKRVISETSSGGVTGNDVIMHFFLASLPFGGVGNSGMGAYHGKHSFDTF 422

Query:   437 SHKKAVLSRGFI--GDVPVRYPPYTKGKLRLLKVLISGSL----LGIIR---ALLG 483
             SH ++ L +     G   VRYPP ++ KL   K  I   L    +G+I    ALLG
Sbjct:   423 SHHRSCLIKDLKMEGTNMVRYPPSSQKKLDWAKFFILKRLNVGRVGLITLALALLG 478

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0008106 "alcohol dehydrogenase (NADP+) activity" evidence=IEA

ZFIN|ZDB-GENE-040912-103 aldh3a2b "aldehyde dehydrogenase 3 family, member A2b" [Danio rerio (taxid:7955)]

 Score = 964 (344.4 bits), Expect = 5.2e-97, P = 5.2e-97
 Identities = 199/449 (44%), Positives = 274/449 (61%)

Query:    23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
             V+  R  F +G++KS  +R+SQLK+L + + ER+ +I +AL++DL + E  +S+YE   +
Sbjct:     8 VERARKAFFTGRSKSLEYRISQLKNLQRFMQERQKEIAEALKKDLKRSEFGTSLYETLGV 67

Query:    83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
             ++ I  ALK+LK W  P     S+ T      I PEP GVVLII  WNYP+       VG
Sbjct:    68 ESEINLALKKLKEWAAPRPVNKSLMTISDQVYIQPEPLGVVLIIGAWNYPWAVTVGPLVG 127

Query:   137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
             AIAAGNA V+KPSEV+  +S ++ + +  Y+D     VV G V ET  LL Q++D I YT
Sbjct:   128 AIAAGNAAVIKPSEVSAHTSKVMEEFLPLYLDKELYPVVTGGVKETQELLKQRFDHIFYT 187

Query:   197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
             GN  V +I+M AAAKHLTP  LELGGKSP   D   +L +ACRR+  GK+  N GQ CI+
Sbjct:   188 GNGMVGKIIMEAAAKHLTPTTLELGGKSPCYIDKDCDLTIACRRIAWGKYS-NCGQTCIA 246

Query:   257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
             PD+I+                   FY +NP +  D  RI+N  HF RL  L++       
Sbjct:   247 PDYILCDPSIQDRVIEEIKKNIKEFYTENPQKCPDYGRIINQRHFKRLMSLME----GSS 302

Query:   317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
             I   GE ++ +  IAPT+L DV  D+ +M EEIFGPLLPI+TV+ ++++   IN   KPL
Sbjct:   303 IAVSGEHNEAECYIAPTVLRDVKPDAKVMQEEIFGPLLPIVTVNSVDEAIKFINQRDKPL 362

Query:   377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
             A Y+F+++KKL  + +   S+GGL+ ND  +H +V SLPFGGV +SGMG YHGK  FD  
Sbjct:   363 ALYIFSSDKKLIDRMIAETSSGGLMANDCLMHFSVSSLPFGGVGDSGMGRYHGKHGFDNL 422

Query:   437 SHKKAVLSRGFIGDV--PVRYPPYTKGKL 463
             SH + VL +    +    +RYPP+T  KL
Sbjct:   423 SHMRGVLLKQLKMEAVNKMRYPPHTADKL 451

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0006081 "cellular aldehyde metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

RGD|2088 Aldh3a1 "aldehyde dehydrogenase 3 family, member A1" [Rattus norvegicus (taxid:10116)]

 Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
 Identities = 200/443 (45%), Positives = 275/443 (62%)

Query:    23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
             VK  R  F SGKT+S  +R+ QL++L +M+NE    I  AL  DL K E  S   EVA +
Sbjct:     8 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 67

Query:    83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
                + + +KEL  W   E    +  T      I  EP GVVL+I  WNYPF       VG
Sbjct:    68 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 127

Query:   137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
             A+AAGNA++LKPSEV+   + LLA L+ +YMD +   VV+G V ET+ LL +++D I YT
Sbjct:   128 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 187

Query:   197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
             G++ V +IVMAAAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++
Sbjct:   188 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 246

Query:   257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
             PD+I+                   FYG++  +S+D  RI+N  HF R+  L+D+ KV+  
Sbjct:   247 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 304

Query:   317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
               HGG  D++   IAPT+L+DV   S +M EEIFGP++PI+ V  +E++   IN   KPL
Sbjct:   305 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 362

Query:   377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
             A Y+F+NN+K+ ++ +   S+GG+  ND  VH+ V +LPFGGV  SGMGAYHGK SF+ F
Sbjct:   363 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 422

Query:   437 SHKKAVLSRGFIGDVP--VRYPP 457
             SH+++ L +  + +     RYPP
Sbjct:   423 SHRRSCLVKSLLNEEAHKARYPP 445

GO:0001666 "response to hypoxia" evidence=IDA

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISO;IDA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO;ISS

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005737 "cytoplasm" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006081 "cellular aldehyde metabolic process" evidence=ISO;ISS

GO:0007568 "aging" evidence=IEP

GO:0007584 "response to nutrient" evidence=IEP

GO:0008106 "alcohol dehydrogenase (NADP+) activity" evidence=ISO;ISS

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0014070 "response to organic cyclic compound" evidence=IEP;IDA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=ISO

GO:0042493 "response to drug" evidence=IEP;IDA

GO:0051384 "response to glucocorticoid stimulus" evidence=IDA

GO:0051591 "response to cAMP" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=ISO;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q80VQ0	AL3B1_MOUSE	1, ., 2, ., 1, ., 5	0.4295	0.9055	0.9423	yes	no
P51648	AL3A2_HUMAN	1, ., 2, ., 1, ., 3	0.4369	0.9075	0.9113	yes	no
P11883	AL3A1_RAT	1, ., 2, ., 1, ., 5	0.4604	0.8829	0.9492	yes	no
Q9I6C8	CALB_PSEAE	1, ., 2, ., 1, ., 6, 8	0.3403	0.9342	0.9558	yes	no
P39616	ALDH2_BACSU	1, ., 2, ., 1, ., 3	0.4074	0.9075	0.9692	yes	no
Q8VXQ2	ALDH_CRAPL	1, ., 2, ., 1, ., 3	0.6100	0.9609	0.9770	N/A	no
Q04458	HFD1_YEAST	1, ., 2, ., 1, ., -	0.3041	0.9342	0.8552	yes	no
Q54DG1	ALDH3_DICDI	1, ., 2, ., 1, ., 5	0.4013	0.8891	0.9212	yes	no
Q5RF60	AL3A2_PONAB	1, ., 2, ., 1, ., 3	0.4360	0.9096	0.9134	yes	no
Q9A777	CALB_CAUCR	1, ., 2, ., 1, ., 6, 8	0.3355	0.8706	0.8742	yes	no
Q70DU8	AL3H1_ARATH	1, ., 2, ., 1, ., 3	0.6945	0.9691	0.9752	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	1.2.1.28	LOW CONFIDENCE prediction!
3rd Layer	1.2.1	0.976

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	487
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	0.0
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	0.0
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	0.0
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	0.0
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	0.0
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	0.0
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	0.0
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	1e-179
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	1e-160
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	1e-157
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	1e-107
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	1e-91
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	1e-82
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	4e-78
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	7e-74
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	3e-61
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	8e-56
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	8e-56
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	3e-54
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	7e-54
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	9e-53
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	8e-51
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	2e-50
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	9e-50
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	3e-49
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	6e-49
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	2e-48
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	4e-48
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	1e-46
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	1e-46
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	3e-46
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	4e-46
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	4e-46
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	4e-46
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	1e-45
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	2e-45
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	3e-45
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	7e-45
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	1e-44
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	4e-44
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	8e-44
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	9e-44
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	1e-43
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	4e-43
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	4e-43
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	8e-43
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	4e-41
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	6e-41
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	9e-41
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	2e-40
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	4e-40
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	4e-40
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	5e-40
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	3e-39
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	3e-39
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	2e-38
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	4e-38
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	4e-38
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	2e-37
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	7e-37
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	8e-37
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	1e-36
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	3e-36
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	1e-35
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	1e-35
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	1e-35
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	3e-35
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	9e-35
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	1e-34
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	5e-34
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	5e-34
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	2e-33
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	2e-32
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	4e-32
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	4e-32
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	9e-32
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	6e-31
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	2e-30
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	3e-30
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	4e-30
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	2e-29
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	2e-28
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	4e-28
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	6e-28
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	1e-27
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	2e-26
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	2e-24
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	1e-23
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	1e-23
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	7e-22
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	3e-19
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	3e-19
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	4e-19
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	3e-18
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	6e-18
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	1e-16
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	2e-14
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	2e-13
cd07084	442	cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+	9e-13
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	7e-11
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	7e-09
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	8e-09
cd07077	397	cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh	3e-08
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	4e-08
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	1e-07
TIGR02278	663	TIGR02278, PaaN-DH, phenylacetic acid degradation	7e-06
cd07081	439	cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla	1e-05
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	2e-05
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	3e-05
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	1e-04
cd07129	454	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh	4e-04
TIGR02288	551	TIGR02288, PaaN_2, phenylacetic acid degradation p	0.002

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score =  716 bits (1850), Expect = 0.0
 Identities = 280/431 (64%), Positives = 343/431 (79%), Gaps = 6/431 (1%)

Query: 19  ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE 78
           A   V+ELR TF SG+T+S  WR SQLK L+++++E E DI  ALRQDL KP  ES   E
Sbjct: 1   APRLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDE 60

Query: 79  VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF----- 133
           V++L +S K A+KELK WM PEK KT +TTFP+ AEIV EP GVVL+IS WN+PF     
Sbjct: 61  VSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLE 120

Query: 134 -FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDK 192
             +GAIAAGNA+VLKPSE+APA+S+LLAKL+ EY+D  +I+V+EG V ET+ALL+QKWDK
Sbjct: 121 PVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKVIEGGVPETTALLEQKWDK 180

Query: 193 ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ 252
           I +TG+ RV RI+MAAAAKHLTPV LELGGK PV+ DS ++LKVA RR+  GKWGCNNGQ
Sbjct: 181 IFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQ 240

Query: 253 ACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK 312
           ACI+PD+++  + +AP L+++LKN LE F+G+NP ESKDLSRIVNS+HF RLS+LLDD  
Sbjct: 241 ACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPS 300

Query: 313 VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 372
           V+ KIVHGGERD+  L I PT+LLD P DS IM+EEIFGPLLPI+TV KIE+S +IINS 
Sbjct: 301 VADKIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSR 360

Query: 373 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFS 432
            KPLAAY+FT NK+LK++ V   S+GG+  NDT V  A+ +LPFGGV ESG GAYHGKFS
Sbjct: 361 PKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFS 420

Query: 433 FDVFSHKKAVL 443
           FD FSHKKAVL
Sbjct: 421 FDAFSHKKAVL 431

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score =  675 bits (1743), Expect = 0.0
 Identities = 333/480 (69%), Positives = 405/480 (84%), Gaps = 6/480 (1%)

Query: 12  EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
           ++F A  AS+ V ELR +F  G T+ Y WRV+QLK LM + +  EP+IV ALR DL KPE
Sbjct: 5   KMFGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE 64

Query: 72  LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
           LESS+YEV+LL+ SIK ALK+LK+WM PEKAKTS+TTFP+SAEIV EP GVVL+IS WNY
Sbjct: 65  LESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNY 124

Query: 132 PFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSAL 185
           PF       +GAI+AGNA+VLKPSE+APASS+LLAKL+ +Y+D S++RVVEGAV ET+AL
Sbjct: 125 PFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDSSAVRVVEGAVTETTAL 184

Query: 186 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 245
           L+QKWDKI YTG+S++ R++MAAAAKHLTPV+LELGGKSPVV DS  +LKV  RR+I GK
Sbjct: 185 LEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGK 244

Query: 246 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 305
           WGCNNGQACISPD+I+TTK+YAPK+++++K ELE FYGKNP+ESKD+SRIVNS HF RLS
Sbjct: 245 WGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLS 304

Query: 306 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 365
           KLLD+ +VS KIV+GGE+D+  L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+S
Sbjct: 305 KLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEES 364

Query: 366 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 425
           FD+I S  KPLAAYLFT+NKKLK++F  TVSAGG+V+ND AVHLA+H+LPFGGV ESGMG
Sbjct: 365 FDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMG 424

Query: 426 AYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 485
           AYHGKFSFD FSHKKAVL R   GD  VRYPPY++GKLRLLK L+  ++  I + LLG S
Sbjct: 425 AYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDIFKVLLGLS 484

Length = 484

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score =  618 bits (1597), Expect = 0.0
 Identities = 219/427 (51%), Positives = 292/427 (68%), Gaps = 11/427 (2%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           V  LR TF +GKT+S  WR +QLK+L +ML E E +I  AL  DL KP  E+ + E+A++
Sbjct: 4   VARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVV 63

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VG 136
              I  ALK LK WM P +    +   P+ A ++PEP GVVLII PWNYP        +G
Sbjct: 64  LGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIG 123

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           AIAAGN +VLKPSE+APA+S+LLAKL+ +Y D  ++ VVEG V   +ALL + +D I +T
Sbjct: 124 AIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAVVEGGVEVATALLAEPFDHIFFT 183

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           G+  V +IVM AAAKHLTPV LELGGKSP + D   NL+VA RR+  GK+  N GQ CI+
Sbjct: 184 GSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFL-NAGQTCIA 242

Query: 257 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD+++  +    +L+E LK  ++ FYG++P ES D  RI+N  HF RL+ LLDD    GK
Sbjct: 243 PDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDD----GK 298

Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
           +V GG+ DK +  IAPT+L DV  DS +M EEIFGP+LPILT D ++++ + INS  KPL
Sbjct: 299 VVIGGQVDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPL 358

Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A YLF+ +K ++++ +   S+GG+ +ND  +H A+ +LPFGGV  SGMGAYHGK  FD F
Sbjct: 359 ALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTF 418

Query: 437 SHKKAVL 443
           SH K+VL
Sbjct: 419 SHLKSVL 425

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score =  597 bits (1542), Expect = 0.0
 Identities = 223/451 (49%), Positives = 309/451 (68%), Gaps = 11/451 (2%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           V++ R  F +G TK   +R+ QLK L + + + E +I++AL++DL K E E+ + E+  +
Sbjct: 4   VEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFV 63

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
            + I  A+K LK WM P++ KT +  FPS + I  EP+GVVLII+PWNYPF       +G
Sbjct: 64  LSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIG 123

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           AIAAGN  VLKPSE+ P +S ++AK++ E  D   + VVEG V E   LLDQK+D I +T
Sbjct: 124 AIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAVVEGGVEENQELLDQKFDYIFFT 183

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           G+ RV +IVM AAAKHLTPV LELGGKSP + D   NLK+A +R++ GK+  N GQ C++
Sbjct: 184 GSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKF-LNAGQTCVA 242

Query: 257 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD+++  +    K ++ LK E++ FYG++PLES D  RI+N  HF RL+ LLD+    GK
Sbjct: 243 PDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDN----GK 298

Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
           IV GG  D+  L I PT+L +V  D  +M EEIFGP+LP+LT D ++++ +II S  KPL
Sbjct: 299 IVFGGNTDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPL 358

Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A YLF+ +KK++++ +E +S GG  INDT +HLA   LPFGGV  SGMG+YHGK+SFD F
Sbjct: 359 ALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTF 418

Query: 437 SHKKAVLSRGFIGDVPVRYPPYTKGKLRLLK 467
           SHKK++L +    D+P+RYPPY   K +L K
Sbjct: 419 SHKKSILKKSTWFDLPLRYPPYKGKKKKLKK 449

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score =  576 bits (1486), Expect = 0.0
 Identities = 246/473 (52%), Positives = 321/473 (67%), Gaps = 9/473 (1%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           V ELR T+ SG+T+S  WR SQLK L+++L + E  I  AL QDL K  +E+   EV +L
Sbjct: 12  VAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVL 71

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
             S   AL  LK WM P+KAK  +  FP++AE+VPEP GVVLI S WN+P        +G
Sbjct: 72  TKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIG 131

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           AIAAGNA+VLKPSE+APA+S+ LA  + +Y+D  +++V+EG  A    LL  KWDKI +T
Sbjct: 132 AIAAGNAVVLKPSELAPATSAFLAANIPKYLDSKAVKVIEGGPAVGEQLLQHKWDKIFFT 191

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD---SGINLKVACRRMIMGKWGCNNGQA 253
           G+ RV RI+M AAAKHLTPV LELGGK P + D   S  + KVA  R++ GKWG   GQA
Sbjct: 192 GSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQA 251

Query: 254 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV 313
           CI+ D+++  + +AP L+E LK+ ++ F+G+NP ESK ++RI+N  HF RLS LL D +V
Sbjct: 252 CIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRV 311

Query: 314 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 373
           +  IVHGG  D+ KL I PT+LL+ P DS IM+EEIFGPLLPI+TV KIEDS   INS  
Sbjct: 312 AASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKP 371

Query: 374 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 433
           KPLA Y FTNN+KLK++ +   S+G +  ND  +  A  SLPFGGV ESG G YHGK+SF
Sbjct: 372 KPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSF 431

Query: 434 DVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSK 486
           D FSH+KAVL R  + +   RYPP+   KL  L+++      G++  LLG  +
Sbjct: 432 DTFSHEKAVLRRSLLTEFEFRYPPWNDFKLGFLRLVYRFDYFGLLLLLLGLKR 484

Length = 484

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score =  570 bits (1471), Expect = 0.0
 Identities = 217/445 (48%), Positives = 298/445 (66%), Gaps = 13/445 (2%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           V+  R  F+SGKT+   +R+ QL++L++ML E E +IV+AL +DL KP+ E+ + E+ L+
Sbjct: 4   VRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLV 63

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
           K  IK A+  L  WM PE  K ++ T      I  EP GVVLII  WNYP        VG
Sbjct: 64  KNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVG 123

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           AIAAGN +V+KPSEV+PA++ LLA+L+ +Y+D     VV G V ET+ LL Q++D I YT
Sbjct: 124 AIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPVVLGGVEETTELLKQRFDYIFYT 183

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           G++ V +IVM AAAKHLTPV LELGGKSP   D   ++ VA RR+  GK+  N GQ CI+
Sbjct: 184 GSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKF-INAGQTCIA 242

Query: 257 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD+++ T +   K +E+LK  L+ FYG++P ES D  RI+N  HF RL KLL      GK
Sbjct: 243 PDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLS----GGK 298

Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
           +  GG+ D+ +  IAPT+L DV     +M EEIFGP+LPI+TV+ ++++ + INS  KPL
Sbjct: 299 VAIGGQTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPL 358

Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A Y+F+NNKK+  + +   S+GG+ +NDT +H  + SLPFGGV  SGMGAYHGK+SFD F
Sbjct: 359 ALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTF 418

Query: 437 SHKKAVLSRGFIGD--VPVRYPPYT 459
           SHK++ L +    +    +RYPPY+
Sbjct: 419 SHKRSCLVKSLNMEKLNSLRYPPYS 443

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score =  538 bits (1388), Expect = 0.0
 Identities = 211/479 (44%), Positives = 306/479 (63%), Gaps = 12/479 (2%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           + E     VK+L+ +F +GKT+   +R  QL++L++ML E + +  +A+ +DL +   E+
Sbjct: 5   NPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFET 64

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF 134
            + EV L    I+  LK L  ++ PEK  T     P  + I+PEP GVVL+I  WNYP  
Sbjct: 65  KMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLN 124

Query: 135 ------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQ 188
                  GAIAAGN +VLKPSE++P +S L+AKL+ +Y+D S +RV+EG V  T+ LL +
Sbjct: 125 LTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKYLDPSYVRVIEGGVEVTTELLKE 184

Query: 189 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 248
            +D I +TG+ RV ++VM AAA++LTP  LELGGKSPV+ D   NLKVA RR+  GK+  
Sbjct: 185 PFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFL- 243

Query: 249 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 308
           N GQ C++PD+++  +    K +E+LK  ++ F+G++P +S+D SRIVN  H  RL++L+
Sbjct: 244 NAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELI 303

Query: 309 DDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 368
            D    GK+V+GGE D     +APT++++   DS +M EEIFGP+LPILT + I++  + 
Sbjct: 304 KDHG--GKVVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEF 361

Query: 369 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH 428
           INS  KPLA Y F  +K+ K+  +E  S+G +VIND   HL   +LPFGGV  SGMGAYH
Sbjct: 362 INSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYH 421

Query: 429 GKFSFDVFSHKKAVLSRGF--IGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 485
           GK+ FD FSH K VL++      D+ +RYPPYT  K  +L  L+    + +   +L   
Sbjct: 422 GKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYTSFKSWVLSFLL-KLSIPVQSEVLKSR 479

Length = 493

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score =  509 bits (1314), Expect = e-179
 Identities = 204/428 (47%), Positives = 277/428 (64%), Gaps = 10/428 (2%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
              LR TF SGKTK   +R+ QLK L   + + E  IV+AL++DL +P  E+ + EV+ +
Sbjct: 11  HSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGV 70

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTF-PSSAEIVPEPFGVVLIISPWNYPF------FV 135
           K  I   LK LK W   EK K     F      I  EP GVVLII PWNYP        V
Sbjct: 71  KNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLV 130

Query: 136 GAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICY 195
           GAIAAG  +VLKPSE+ P +++LLA+LV +Y+D  + +VV+G V ET+ALL+QK+DKI Y
Sbjct: 131 GAIAAGCTVVLKPSELTPHTAALLAELVPKYLDPDAFQVVQGGVPETTALLEQKFDKIFY 190

Query: 196 TGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACI 255
           TG+ RV RI+  AAAKHLTPV LELGGKSPV+     +L++A +R++ GK+G N GQ C+
Sbjct: 191 TGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFG-NAGQICV 249

Query: 256 SPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG 315
           +PD+++       + +E LK  L+ FY      S D +RIVN  HF RL  LLD  K  G
Sbjct: 250 APDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTK--G 307

Query: 316 KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKP 375
           K+V GGE D+    I PT++ DV  D  +MSEE+FGP+LPI+ VD ++++  +INS   P
Sbjct: 308 KVVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTP 367

Query: 376 LAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDV 435
           LA Y+FT++K      +    +GG+VINDT +H+ V + PFGGV +SG GAYHGK+ FD 
Sbjct: 368 LALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDT 427

Query: 436 FSHKKAVL 443
           F+H++ V+
Sbjct: 428 FTHERTVV 435

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score =  460 bits (1186), Expect = e-160
 Identities = 186/442 (42%), Positives = 264/442 (59%), Gaps = 19/442 (4%)

Query: 11  NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP 70
             VF A          +    + +  +   R+++LK L K +  R  +I+ AL  D  KP
Sbjct: 1   RRVFAA---------QQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKP 51

Query: 71  ELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWN 130
             E  + E+  + + I  A+K LK WM P++ +T +  F + ++I  EP GV LIISPWN
Sbjct: 52  AAEVDLTEILPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWN 111

Query: 131 YPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSA 184
           YPF       V AIAAGN  +LKPSE+ P +S+++AK++ E  D   + V EG      A
Sbjct: 112 YPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAVFEGDAEVAQA 171

Query: 185 LLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 244
           LL+  +D I +TG+  V +IVMAAAAKHL  V LELGGKSP + D   +LK A +++  G
Sbjct: 172 LLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWG 231

Query: 245 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP--LESKDLSRIVNSNHFA 302
           K+  N GQ CI+PD++   +      +E LK E+E FYGK+     S DL+RIVN  HF 
Sbjct: 232 KF-LNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFD 290

Query: 303 RLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 361
           RL  LLDD    G K+  GG+ D  +  IAPT+L +V  D  IM EEIFGP+LPI+T + 
Sbjct: 291 RLKGLLDDAVAKGAKVEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYED 350

Query: 362 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQE 421
           +++  + IN+  KPLA Y+F+ +K    + +   S+GG+V+ND  +H    +LPFGGV  
Sbjct: 351 LDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNN 410

Query: 422 SGMGAYHGKFSFDVFSHKKAVL 443
           SG+G+YHG + F  FSH++AVL
Sbjct: 411 SGIGSYHGVYGFKAFSHERAVL 432

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score =  452 bits (1166), Expect = e-157
 Identities = 163/422 (38%), Positives = 238/422 (56%), Gaps = 19/422 (4%)

Query: 37  SYGWRVSQLKSLMKMLNEREPDIVDALRQDL-DKPELESSIYEVALLKTSIKSALKELKH 95
           S   R  +L  L  +L + +  + +A+  D   +   E+ + E+      IK A K LK 
Sbjct: 18  SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKK 77

Query: 96  WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPS 149
           WM P +    +   P+ AE+  +P GVV II PWNYP +      + A+AAGN +++KPS
Sbjct: 78  WMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPS 137

Query: 150 EVAPASSSLLAKLVGEYMDLSSIRVVEGAV---AETSALLDQKWDKICYTGNSRVARIVM 206
           E  P +S+LLA+L+ EY D   + VV G     A  S+L    +D + +TG++ V R VM
Sbjct: 138 EFTPRTSALLAELLAEYFDEDEVAVVTGGADVAAAFSSL---PFDHLLFTGSTAVGRHVM 194

Query: 207 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 266
            AAA++LTPV LELGGKSP +     +L  A  R+  GK   N GQ C++PD+++  +D 
Sbjct: 195 RAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL-NAGQTCVAPDYVLVPEDK 253

Query: 267 APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH----GGE 322
             + + + K  +   Y     ++ D + I+N  H+ARL  LL+D +  G  V      GE
Sbjct: 254 LEEFVAAAKAAVAKMYP-TLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGE 312

Query: 323 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 382
                 ++ PTL+L+V  D  +M EEIFGP+LPILT D ++++ D IN+  +PLA Y F 
Sbjct: 313 DFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFG 372

Query: 383 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            +K  + + +    +GG+ INDT +H+A   LPFGGV  SGMGAYHGK  F  FSH K V
Sbjct: 373 EDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPV 432

Query: 443 LS 444
             
Sbjct: 433 FK 434

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  324 bits (834), Expect = e-107
 Identities = 133/434 (30%), Positives = 216/434 (49%), Gaps = 19/434 (4%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           V   R  F +        R + L+ L  +L ER  ++      +  KP +E ++ EVA  
Sbjct: 4   VAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALGEVARA 62

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VG 136
             + +      +                  A +  EP GVV  I+PWN+P          
Sbjct: 63  ADTFRYYAGLARRLHGEVIP---SPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAP 119

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKI 193
           A+AAGN +VLKPSE+ P ++ LLA+L+ E  +    + VV G   E  A L    + DKI
Sbjct: 120 ALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKI 179

Query: 194 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 253
            +TG++ V + +M AAA++L  V LELGGKSP++     +L  A +  + G +G N GQ 
Sbjct: 180 SFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFG-NAGQV 238

Query: 254 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDK 312
           C +   ++  +    + +E L   ++     NPL+   D+  ++++    R+   ++D K
Sbjct: 239 CTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAK 298

Query: 313 VSG-KIVHGGERDKNKLR--IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII 369
             G K++ GG+R +      + PT+L DV  D  I  EEIFGP+LP++     E++ ++ 
Sbjct: 299 AEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELA 358

Query: 370 NSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 429
           N     LAA +FT + +   +  E + AG + IND +V  A  S PFGGV++SG+G   G
Sbjct: 359 NDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG-AEPSAPFGGVKQSGIGREGG 417

Query: 430 KFSFDVFSHKKAVL 443
            +  + ++  K V 
Sbjct: 418 PYGLEEYTEPKTVT 431

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  286 bits (734), Expect = 1e-91
 Identities = 135/441 (30%), Positives = 207/441 (46%), Gaps = 19/441 (4%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           D +AA   V   R  F +    S   R + L+ +  +L  R  ++   +  +  KP  E+
Sbjct: 37  DVDAA---VAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPISEA 93

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF 134
              E+A     I+   +E +        +T  T   S A +  EP GVV  I+PWN+P  
Sbjct: 94  RG-EIARAADFIRYYAEEARRLE----GETIPTDKGSKALVRREPLGVVGAITPWNFPLA 148

Query: 135 VG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 186
           +       A+AAGN +VLKPSE  P S+  LA+L  E  +    + VV G  AE    L 
Sbjct: 149 LAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALV 208

Query: 187 -DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 245
                D I +TG++ V R + AAAA +L PV LELGGKSP +     +L  A    + G 
Sbjct: 209 AHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGA 268

Query: 246 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARL 304
           +  N GQ C +   +I  +    + +E L     +    +PL  S DL  +++     R+
Sbjct: 269 FF-NAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPSTDLGPLISEEQLDRV 327

Query: 305 SKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 364
              ++D    G  +  G +      + PT+L  V  D  I  EEIFGP+LP++     E+
Sbjct: 328 EGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEE 387

Query: 365 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 424
           + ++ N     LAA +FT +     +    + AG + IND      +  LPFGGV++SG+
Sbjct: 388 AIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGL 447

Query: 425 GAYHGKFSFDVFSHKKAVLSR 445
           G   GK+  + F+  K V  +
Sbjct: 448 GREGGKYGLEEFTEVKTVTIK 468

Length = 472

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  259 bits (665), Expect = 1e-82
 Identities = 120/423 (28%), Positives = 188/423 (44%), Gaps = 72/423 (17%)

Query: 30  FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89
           F +        R + L+ +  +L ER  ++      +  KP +E ++ EVA    + + A
Sbjct: 7   FKAWAALPPAERAAILRKIADLLEERREELAALETLETGKP-IEEALGEVARAIDTFRYA 65

Query: 90  LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNA 143
                    PE            A +  EP GVV +I+PWN+P          A+AAGN 
Sbjct: 66  AGLADKLGGPE---LPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNT 122

Query: 144 LVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSR 200
           +VLKPSE+ P ++  LA+L+ E  +    + VV G   E  A L    + DKI +TG++ 
Sbjct: 123 VVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTA 182

Query: 201 VARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 260
           V + +M AAA++L PV LELGGKSPV+ D   +L  A    + G +  N GQ C +    
Sbjct: 183 VGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFF-NAGQICTAA--- 238

Query: 261 ITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHG 320
                                           SR+                     +VH 
Sbjct: 239 --------------------------------SRL---------------------LVHE 245

Query: 321 GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 380
              D+   ++  T+L+DV  D  I  EEIFGP+LP++     E++  + N     L A +
Sbjct: 246 SIYDEFVEKLV-TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGV 304

Query: 381 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 440
           FT +     +  E + AG + IND+++ +     PFGGV+ SG+G   G +  + ++  K
Sbjct: 305 FTRDLNRALRVAERLRAGTVYINDSSIGVGPE-APFGGVKNSGIGREGGPYGLEEYTRTK 363

Query: 441 AVL 443
            V+
Sbjct: 364 TVV 366

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  251 bits (643), Expect = 4e-78
 Identities = 125/406 (30%), Positives = 200/406 (49%), Gaps = 23/406 (5%)

Query: 51  MLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFP 110
           +L ER  ++ +    +  KP  E+   EV     +++      +  +  E   +      
Sbjct: 63  LLEERRDELAELETLETGKPLAEARG-EVPRAIDTLRYYAGLARK-LEGETLPSDPGVL- 119

Query: 111 SSAEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVG 164
             A    EP GVV  I+PWN+P  +       A+AAGN +VLKPSE+ P ++ LLA+L  
Sbjct: 120 --AYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFE 177

Query: 165 EYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 220
           E   L    + VV G+ +E    L      DK+ +TG++ V R +  AAAK+L  V LEL
Sbjct: 178 E-AGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLEL 236

Query: 221 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 279
           GGK+P +VFD   +L  A    + G +G N GQ C +   ++  +    + +E L    +
Sbjct: 237 GGKNPLIVFDDA-DLDAAVEGAVFGAFG-NAGQVCTAGSRLLVHESIYDEFVERLVEAAK 294

Query: 280 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-IAPTLLL 336
           +    +PL+   D+  +++     R+   ++D K  G K++ GGE    K   + PT+L 
Sbjct: 295 SLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLA 354

Query: 337 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 396
           DV  D  I  EEIFGP+L ++     +++ ++ N     LAA +FTN+ +   +    + 
Sbjct: 355 DVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLE 414

Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           AG + IND         LPFGG ++SG G   GK   + ++  K V
Sbjct: 415 AGMVWINDYTTGDPEA-LPFGGFKQSGFGREGGKEGLEEYTETKTV 459

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  239 bits (613), Expect = 7e-74
 Identities = 130/415 (31%), Positives = 204/415 (49%), Gaps = 16/415 (3%)

Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
           R  +L    + L +   ++ + L  +  KP  ++ + EV L   +I  A +     + P 
Sbjct: 42  RAQRLLRWKRALADHADELAELLHAETGKPRADAGL-EVLLALEAIDWAARNAPRVLAPR 100

Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA 154
           K  T +      A +   P+GVV +ISPWNYP        + A+AAGNA+VLKPSEV P 
Sbjct: 101 KVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160

Query: 155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHL 213
              LLA+           ++VV G  A  +AL+D   DK+ +TG+    R VMAAAA+ L
Sbjct: 161 VGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERL 220

Query: 214 TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG--CNNGQACISPDHIITTKDYAPKLL 271
            PV+LELGGK P++  +  +L+ A    +   WG   N GQ CIS + +   +    + +
Sbjct: 221 IPVVLELGGKDPMIVLADADLERAAAAAV---WGAMVNAGQTCISVERVYVHESVYDEFV 277

Query: 272 ESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKL 328
             L  +      G + +   D+  +  +     + + +DD    G K + GG R +    
Sbjct: 278 ARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGP 337

Query: 329 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 388
              PT+L DVP D  +M EE FGP+LP++ V   +++  + N     L+A +F+ +    
Sbjct: 338 FYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARA 397

Query: 389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
           +     + AG + IND  +   + +LPFGGV++SG G  HG      F   KA+ 
Sbjct: 398 EAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  207 bits (528), Expect = 3e-61
 Identities = 129/408 (31%), Positives = 203/408 (49%), Gaps = 26/408 (6%)

Query: 45  LKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKT 104
           L+SL+K + E + +I     +D  K  +++S+ E+ +    I+  LK  +  + PE    
Sbjct: 46  LRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPG 105

Query: 105 SITTFPSSAEIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSL 158
            +  F   A +  EP GVV  I  WNYPF       + A+ AGNA+V+K SE    SS  
Sbjct: 106 GLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGF 165

Query: 159 LAKLV-------GEYMDLSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAA 210
              ++       G   DL  +++V        AL      D I + G+  V + VMAAAA
Sbjct: 166 FLSIIRECLAACGHDPDL--VQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAA 223

Query: 211 KHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPK 269
           + LTPV+LELGGK P +V D   +L      ++ G +  ++GQ CI  + +I  +    K
Sbjct: 224 ESLTPVVLELGGKDPAIVLDD-ADLDQIASIIMRGTFQ-SSGQNCIGIERVIVHEKIYDK 281

Query: 270 LLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER---- 323
           LLE L + ++      PL+   D+  +++   F RL +L+ D    G +++ GG+R    
Sbjct: 282 LLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHP 341

Query: 324 -DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 382
                    PTLL+DV  D  I  EE+FGP++ ++     E++ +I NS    L A +F 
Sbjct: 342 EYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFG 401

Query: 383 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGK 430
            + K  ++    +  G + IND  V+  V  LPFGGV+ SG G + G+
Sbjct: 402 KDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGE 449

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  191 bits (488), Expect = 8e-56
 Identities = 118/349 (33%), Positives = 183/349 (52%), Gaps = 25/349 (7%)

Query: 111 SSAEIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVG 164
           + A +V EP GVVL I+PWN P           +AAGN +VLK SE++P +  L+ ++  
Sbjct: 90  TLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFH 149

Query: 165 E------YMDLSSIRVVEGAVAETSALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVL 217
           E       +++ +    E A     AL+      K+ +TG++RV RI+   AAKHL PVL
Sbjct: 150 EAGLPKGVLNVVTHSP-EDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVL 208

Query: 218 LELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 276
           LELGGK+P +V +   +L  A    + G +  N+GQ C+S + II  +  A + +E LK 
Sbjct: 209 LELGGKAPAIVLEDA-DLDAAANAALFGAF-LNSGQICMSTERIIVHESIADEFVEKLKA 266

Query: 277 ELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK--LRIAPT 333
             E  +         L  +V++    R+ +L+DD    G K+V GG  D++     + PT
Sbjct: 267 AAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPT 322

Query: 334 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 393
           +L +V  D  I SEE FGP++ I+ V   E++  I N     L+A +FT +        +
Sbjct: 323 ILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAK 382

Query: 394 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            + +G + IN   VH    +LP GGV+ SG G ++GK+  D F+  K +
Sbjct: 383 RIESGAVHINGMTVHDE-PTLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  191 bits (488), Expect = 8e-56
 Identities = 104/357 (29%), Positives = 175/357 (49%), Gaps = 29/357 (8%)

Query: 107 TTFPSSAE-----IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPAS 155
              PS        +   P GVV +ISP+N+P  +       A+A GNA+VLKP    P +
Sbjct: 81  EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVT 140

Query: 156 SSLL-AKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAA 210
             LL A++  E   L    + VV G  +E    L    +   I +TG++ V R +   A 
Sbjct: 141 GGLLIAEIF-EEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAG 199

Query: 211 KHLTPVLLELGGKSPVVF--DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 268
           +HL  V LELGG +P++   D+ ++L V+      G +  + GQ C++   I+  +    
Sbjct: 200 RHLKKVALELGGNNPLIVLDDADLDLAVSA--AAFGAF-LHQGQICMAAGRILVHESVYD 256

Query: 269 KLLESLKNELENF-YGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK 325
           + +E L  + +    G +P +    +  ++N     R+  +++D   +G +++ GG  + 
Sbjct: 257 EFVEKLVAKAKALPVG-DPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYEG 315

Query: 326 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 385
              +  PT+L DV  D  I  EEIFGP+ P++  D  E++ ++ N     L+A +FT + 
Sbjct: 316 LFYQ--PTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDL 373

Query: 386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           +    F E +  G + IND  V+   H  PFGGV+ SG G + G  S + F+  + +
Sbjct: 374 ERAMAFAERLETGMVHINDQTVNDEPHV-PFGGVKASGGGRFGGPASLEEFTEWQWI 429

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  188 bits (479), Expect = 3e-54
 Identities = 117/362 (32%), Positives = 175/362 (48%), Gaps = 38/362 (10%)

Query: 107 TTFPSSA-----EIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPAS 155
            T PS A      ++ +P GVV  I+PWN+P          A+AAG  +VLKP+E  P S
Sbjct: 100 RTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLS 159

Query: 156 SSLLAKL---------VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARI 204
           +  LA+L         V        + VV G+ AE    L    +  KI +TG++ V ++
Sbjct: 160 ALALAELAEEAGLPAGV--------LNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKL 211

Query: 205 VMAAAAKHLTPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITT 263
           +MA AA  +  V LELGG +P  VFD   +L  A    I  K+  N GQ C+  + I   
Sbjct: 212 LMAQAADTVKRVSLELGGNAPFIVFDD-ADLDKAVDGAIASKFR-NAGQTCVCANRIYVH 269

Query: 264 KDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 321
           +    + +E L   ++     N L+   D+  ++N     ++  L++D    G K++ GG
Sbjct: 270 ESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGG 329

Query: 322 ERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 380
           +R         PT+L DV  D LIM+EE FGP+ PI+  D  ++     N     LAAY+
Sbjct: 330 KRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYV 389

Query: 381 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 440
           FT +     +  E + AG + IN   +  +    PFGGV+ESG+G   GK   + +   K
Sbjct: 390 FTRDLARAWRVAEALEAGMVGINTGLI--SDAEAPFGGVKESGLGREGGKEGLEEYLETK 447

Query: 441 AV 442
            V
Sbjct: 448 YV 449

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  187 bits (476), Expect = 7e-54
 Identities = 100/344 (29%), Positives = 174/344 (50%), Gaps = 22/344 (6%)

Query: 115 IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 167
           ++ EP GVV II+PWN+PF +       A+AAG  +V+KPSE    ++ +LA+L+ E  +
Sbjct: 115 VLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGL 174

Query: 168 DLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 225
               + +V G  A     +      D + +TG++RV + + AAAA++L  V LELGGK+P
Sbjct: 175 PAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNP 234

Query: 226 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 285
            +  +  +L  A   ++ G +  N G+ C S   ++  +  A   + ++          +
Sbjct: 235 QIVFADADLDAAADAVVFGVY-FNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGD 293

Query: 286 PL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD--KNKLRIAPTLLLDVPRD 341
           PL     +  I+N    A+++  +D  +  G  ++ GGER      L   PT+  DV  D
Sbjct: 294 PLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPD 353

Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
             I  EEIFGP+L +LT D ++++  + N     L+A +++ +          + AG + 
Sbjct: 354 MAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVW 413

Query: 402 IN---DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           +N   D +       LPFGG ++SG+G   G++  + ++  K V
Sbjct: 414 VNTFLDGSPE-----LPFGGFKQSGIGRELGRYGVEEYTELKTV 452

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  184 bits (468), Expect = 9e-53
 Identities = 103/352 (29%), Positives = 171/352 (48%), Gaps = 20/352 (5%)

Query: 107 TTFPSSAE-----IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPAS 155
            T PS +       V  P GVV  I+P+NYP  +       A+AAGN +VLKPSE  P  
Sbjct: 102 ETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVI 161

Query: 156 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKH 212
              +A+++ E  +      VV G  AE    L  D +   + +TG++ V R +   A +H
Sbjct: 162 GLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRH 221

Query: 213 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 272
           L  + LELGGK+P++  +  +L  A R    G +  + GQ C+S   II  +    + ++
Sbjct: 222 LKKITLELGGKNPLIVLADADLDYAVRAAAFGAF-MHQGQICMSASRIIVEEPVYDEFVK 280

Query: 273 SLKNELENFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI 330
                       +P +    +  +++     R+ + ++D    G K++ GG+ D N    
Sbjct: 281 KFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN--FY 338

Query: 331 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 390
            PT+L DV  D  I  EE FGP+  ++     E++ ++ N     L+A + TN+ +   +
Sbjct: 339 QPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFK 398

Query: 391 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
             E + +G + IND  +    H +PFGGV+ SG G   G++S + F+  K +
Sbjct: 399 LAERLESGMVHINDPTILDEAH-VPFGGVKASGFGREGGEWSMEEFTELKWI 449

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  178 bits (455), Expect = 8e-51
 Identities = 104/346 (30%), Positives = 168/346 (48%), Gaps = 29/346 (8%)

Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           +P GV  +I+PWN P  +       A+A GN +VLKPSE  P ++ LLA+L  E  +   
Sbjct: 116 QPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPG 175

Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 227
            + VV G   E  A L      D I +TG +   R +M AAA +L PV LELGGK+P +V
Sbjct: 176 VVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIV 235

Query: 228 FDSGINLKVACR---RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 284
           F    +L  A     R        NNG+ C++   I+  +    + LE      +     
Sbjct: 236 FADA-DLDRAVDAAVRSSFS----NNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVG 290

Query: 285 NPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPTLLLD 337
           +PL    ++  +++  H  ++   ++  +  G  I+ GG R +         + PT++  
Sbjct: 291 DPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITG 350

Query: 338 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
           +  DS +  EEIFGP++ ++  D  E++ ++ N     LAAY++T +     +    + A
Sbjct: 351 LDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEA 410

Query: 398 GGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           G + +N   V  L     PFGGV+ SG+G   G +S + ++  K V
Sbjct: 411 GTVWVNCWLVRDL---RTPFGGVKASGIGREGGDYSLEFYTELKNV 453

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  178 bits (454), Expect = 2e-50
 Identities = 111/342 (32%), Positives = 166/342 (48%), Gaps = 24/342 (7%)

Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGE--YMDL 169
           EP GV   I PWN+P  +       A+AAGN +VLKP+E  P S+  LA+L+ E  +   
Sbjct: 140 EPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPP- 198

Query: 170 SSIRVVEG--AVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP 225
             + +V G    A  +A+      DKI +TG++ V R +M AAAK +L  V LELGGKSP
Sbjct: 199 GVVNIVPGFGPTA-GAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSP 257

Query: 226 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 284
            +VFD   +L  A      G +  N GQ C +   I   +    + +E  K   E     
Sbjct: 258 NIVFDDA-DLDKAVEWAAFGIF-FNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVG 315

Query: 285 NPLESKDL-SRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRD 341
           +P +        V+   F ++   ++  K  G  ++ GGER  +K   I PT+  DV  D
Sbjct: 316 DPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDD 375

Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
             I  EEIFGP++ IL     ++  +  N     LAA +FT +     +    + AG + 
Sbjct: 376 MKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVW 435

Query: 402 INDTAV-HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           +N   V      ++PFGG ++SG G   G+   + ++  KAV
Sbjct: 436 VNTYNVFD---AAVPFGGFKQSGFGRELGEEGLEEYTQVKAV 474

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  176 bits (448), Expect = 9e-50
 Identities = 104/319 (32%), Positives = 169/319 (52%), Gaps = 17/319 (5%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGE-YMDLS 170
           EP GVV  I+P+N+P       VG AIAAGNA+VLKP+   P S+  LA+L+ E  +   
Sbjct: 122 EPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKG 181

Query: 171 SIRVVEGAVAET-SALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
           ++ VV G+      AL+ D +   I +TG+  V   +   A   L  V LELG  + V+ 
Sbjct: 182 ALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIV 239

Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL- 287
           D+  +L+ A  R + G +  N GQ CIS   I   +D   + LE      +     +PL 
Sbjct: 240 DADADLEKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLD 298

Query: 288 ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMS 346
           E  D+  +++     R+ + +++    G +++ GG+RD   L   PT+L DVP D  ++ 
Sbjct: 299 EDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAIL--EPTVLTDVPPDMKVVC 356

Query: 347 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 406
           EE+F P++ +   D ++++  + N     L A +FTN+ +   +    +  GG++IND++
Sbjct: 357 EEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSS 416

Query: 407 VHLAVHSLPFGGVQESGMG 425
                H +P+GGV+ESG G
Sbjct: 417 TFRVDH-MPYGGVKESGTG 434

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  174 bits (444), Expect = 3e-49
 Identities = 113/417 (27%), Positives = 204/417 (48%), Gaps = 25/417 (5%)

Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHW---M 97
           R++ L+    +L +R  +    +  +  KP ++ +  EV     +++ A +E +      
Sbjct: 45  RMAILERAADLLKKRAEEFAKIIACEGGKP-IKDARVEVDRAIDTLRLAAEEAERIRGEE 103

Query: 98  TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEV 151
            P  A          A  + EP GVVL I+P+N+P          AIA G  +VLKP+  
Sbjct: 104 IPLDATQGSDN--RLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASK 161

Query: 152 APASSSLLAKLV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAA 208
            P S+  LAK++   G    +  +   E  V   +   D++   + +TG++ V   + A 
Sbjct: 162 TPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRAN 221

Query: 209 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC-NNGQACISPDHIITTKDYA 267
           A      + LELGG +PV+ D   +L  A   +  G  G  + GQ CIS   I   ++  
Sbjct: 222 AGG--KRIALELGGNAPVIVDRDADLDAAIEALAKG--GFYHAGQVCISVQRIYVHEELY 277

Query: 268 PKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERDK 325
            + +E+    ++     +PL+   D+  +++     R+ + +++  +   +++ GGERD 
Sbjct: 278 DEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDG 337

Query: 326 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 385
              +  PT+L DVPRD+ + +EE FGP++PI+  D  E++  I NS    L A +FT + 
Sbjct: 338 ALFK--PTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDL 395

Query: 386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            +  +  E +  GG+++ND++       +PFGGV+ESG+G     ++ +  + +K V
Sbjct: 396 NVAFKAAEKLEVGGVMVNDSS-AFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTV 451

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  174 bits (443), Expect = 6e-49
 Identities = 137/448 (30%), Positives = 215/448 (47%), Gaps = 46/448 (10%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLN--EREPDIVDALRQ-DLDKPELESSIYEV 79
           VK  R  F S  +K  G    +L  L K+ +  E+  D++ A+   D  KP   +++ ++
Sbjct: 51  VKAARKAFESWWSKVTGEERGEL--LDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDL 108

Query: 80  ALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFV---- 135
                 I + ++    W    + KT  T+    A  + EP+GV   I PWNYP  +    
Sbjct: 109 D----EIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWK 164

Query: 136 --GAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAET-SALLDQ-KW 190
              A+AAGN +V+KP+E  P S    A LV E       + ++ G  A   SAL +    
Sbjct: 165 LAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDV 224

Query: 191 DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGC- 248
           DKI +TG++   R+VM AAA++L  V LE GGKSP +VF+   +L  A       KW   
Sbjct: 225 DKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFEDA-DLDQAV------KWAAA 277

Query: 249 ----NNGQACISPDHIITTKDYAPKLLESLKNEL-ENFYGKNPLESK-DLSRIVNSNHFA 302
               N+GQ C +   I   +    K +E     + +N+   +P +    +   V+   + 
Sbjct: 278 GIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYD 337

Query: 303 RLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPIL 357
           R+   ++  K  G K+V+GGE+    L     I PT+  DVP+D  I+ EEIFGP++ I 
Sbjct: 338 RVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVIS 397

Query: 358 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN---DTAVHLAVHSL 414
                E++    N  T  LAA +FT + +   +    + AG + IN   D+ V      +
Sbjct: 398 KFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVG-----V 452

Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           PFGG + SG+G   G++  + ++  KAV
Sbjct: 453 PFGGFKMSGIGRELGEYGLETYTQTKAV 480

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score =  172 bits (438), Expect = 2e-48
 Identities = 100/348 (28%), Positives = 160/348 (45%), Gaps = 25/348 (7%)

Query: 116 VPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 169
           V EP GVV  I PWN P  +       A+ AGN +VLK +E AP +  LLA+++ + +  
Sbjct: 114 VREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQVLPA 173

Query: 170 SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 227
             + V+ G   E  A L      DK+ +TG++ V +I+  AAA  L PV LELGGKSP++
Sbjct: 174 GVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMI 233

Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 287
                +L  A    I G      GQ+C +   +   +D     LE L  +L      +PL
Sbjct: 234 VFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPL 293

Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKV--SGKIVHGGE-----RDKNKLRIAPTLLLDVP 339
            E+ D+  I++   FA++   +D         ++ GG         +   + PT+   V 
Sbjct: 294 DEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVD 353

Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
            +  +  EEIFGP+L  +     ++   + N     LAAY++T +     +    + AG 
Sbjct: 354 NEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGW 413

Query: 400 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF----DVFSHKKAVL 443
           + +N            +GG ++SG+G    + S     + F+ KK V 
Sbjct: 414 VQVNQGGGQQP--GQSYGGFKQSGLGR---EASLEGMLEHFTQKKTVN 456

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  171 bits (436), Expect = 4e-48
 Identities = 130/460 (28%), Positives = 202/460 (43%), Gaps = 52/460 (11%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
            AE     V+  R  F   K  +   R   L+++ + + ER  ++ +   +D  KP  E+
Sbjct: 17  TAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEA 76

Query: 75  SI----------YEVAL---LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFG 121
           +           Y   L   L                          F   A +  EP G
Sbjct: 77  AWDVDDVAGCFEYYADLAEQLDAK------------AERAVPLPSEDF--KARVRREPVG 122

Query: 122 VVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 174
           VV +I+PWN+P  +       A+AAG  +VLKPSE+   +   LA++  E  +    + V
Sbjct: 123 VVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNV 182

Query: 175 VEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVF-DS 230
           V G   E  A L      DKI +TG++     VM AAA+ + PV LELGGKSP +VF D+
Sbjct: 183 VTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDA 242

Query: 231 GINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE 288
            +   V      M   GC  NNGQ C +   ++  +  A   LE L    E     +PLE
Sbjct: 243 DLEKAV---EWAMF--GCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLE 297

Query: 289 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPTLLLDVPRDSL 343
               L  +V+   + ++   +   K  G +++ GG R  +  +   IAPT+  DVP DS 
Sbjct: 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSR 357

Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
           I  EEIFGP+L + +    +++  + N     LAA + + + +   +  E + AG + IN
Sbjct: 358 IWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWIN 417

Query: 404 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
                      P+GG + SG+G   G++  D +   K + 
Sbjct: 418 --CSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  167 bits (426), Expect = 1e-46
 Identities = 106/344 (30%), Positives = 165/344 (47%), Gaps = 21/344 (6%)

Query: 116 VPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MD 168
             EP GVV  I+PWN P  +       A+AAGN +VLKPSE  PAS+  LAKL  E    
Sbjct: 116 RREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFP 175

Query: 169 LSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 226
              + VV G   ET   L +     KI +TG +   R +  AAA++L PV LELGGKSP 
Sbjct: 176 PGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPN 235

Query: 227 -VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 285
            VFD   +L  A   ++ G +    GQ C++   ++  +    + +E L          +
Sbjct: 236 IVFDDA-DLDAAVNGVVAGIFA-AAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGD 293

Query: 286 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPTLLLDV 338
           PL+ +  +  +       ++ + +   +  G +++ GGER             PT+L DV
Sbjct: 294 PLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADV 353

Query: 339 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 398
             D  I  EE+FGP+L ++  D  E++  + N     LAA ++T +     +    + AG
Sbjct: 354 TNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAG 413

Query: 399 GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            + +N         S PFGG ++SG+G  +G  +   ++  K+V
Sbjct: 414 TVWVNT--YRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSV 455

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  167 bits (425), Expect = 1e-46
 Identities = 107/338 (31%), Positives = 167/338 (49%), Gaps = 17/338 (5%)

Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP GVV  I PWN+P          A+AAGN +VLKP+E+ P S+  +A+L+ E      
Sbjct: 116 EPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAG 175

Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 227
            + VV G      A L      DKI +TG++ V R +M  AA +L  V LELGGKS  +V
Sbjct: 176 VLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIV 235

Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 287
           F    +L  A R    G +  N GQ C +   ++  +    + LE   +   +    +PL
Sbjct: 236 FADA-DLDAAVRAAATGIFY-NQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPL 293

Query: 288 ESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLI 344
           + K  +  +V+   F R+   +D  +  G +++ GG+R   +   + PT+   VP +  I
Sbjct: 294 DPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRI 353

Query: 345 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 404
             EEIFGP++ ++     E++  I N     LAA ++T +     +    + AG + IN 
Sbjct: 354 AQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWIN- 412

Query: 405 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           T       S PFGG ++SG G   G+ + D ++  K+V
Sbjct: 413 TYNRFDPGS-PFGGYKQSGFGREMGREALDEYTEVKSV 449

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  166 bits (423), Expect = 3e-46
 Identities = 114/346 (32%), Positives = 168/346 (48%), Gaps = 26/346 (7%)

Query: 116 VPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 169
           V EP GV   I PWNYP  +       A+AAGNA+V+KP+E AP ++  LA+L  E   L
Sbjct: 114 VREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEE-AGL 172

Query: 170 --SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 225
              ++ VV G  AE  A L      D I +TG+      VM AAA+++ PV LELGGKSP
Sbjct: 173 PAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSP 232

Query: 226 -VVF---DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 281
            +VF   D    L V    +I      N GQ C +   ++  +    ++LE L       
Sbjct: 233 QIVFADADLEAALPVVVNAIIQ-----NAGQTCSAGSRLLVHRSIYDEVLERLVERFRAL 287

Query: 282 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLL 336
                LE  DL  ++++    R+   +   +  G +IV GG   +        +APTLL 
Sbjct: 288 RVGPGLEDPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLD 347

Query: 337 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 396
           DVP DS +  EEIFGP+L ++  D   ++  + N     L A ++T +     +    + 
Sbjct: 348 DVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLR 407

Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           AG + +N+      +  LPFGGV++SG G   G  +   ++  K V
Sbjct: 408 AGQVFVNNYGAGGGI-ELPFGGVKKSGHGREKGLEALYNYTQTKTV 452

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  166 bits (423), Expect = 4e-46
 Identities = 117/408 (28%), Positives = 198/408 (48%), Gaps = 30/408 (7%)

Query: 52  LNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALK-----ELKHWMTPEKAKTSI 106
           L ER  +IV+ L ++     ++++I E        + A       E +   +    K + 
Sbjct: 67  LEERRDEIVEWLIRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENR 125

Query: 107 TTFPSSAEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLA 160
                   +  EP GVV +ISPWN+P  +       A+A GNA+VLKP+   P +  LL 
Sbjct: 126 --------VYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLL 177

Query: 161 KLVGEYMDLSS--IRVVEGAVAET-SALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPV 216
             + E   L    + VV GA +E   A ++    + I +TG++ V R +   A +HL  V
Sbjct: 178 AKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKV 237

Query: 217 LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 276
            LELGG +P V     ++  A    + GK+  + GQ C++ + II  +D   + +E    
Sbjct: 238 ALELGGNNPFVVLEDADIDAAVNAAVFGKFL-HQGQICMAINRIIVHEDVYDEFVEKFVE 296

Query: 277 ELENFYGKNPLESKDL-SRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTL 334
            ++     +P +   +   ++N +    L   ++     G  ++ GGE + N L   PT+
Sbjct: 297 RVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVL--EPTV 354

Query: 335 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 394
           L DV  D  I  EEIFGP+ PI+  D  E++ ++ N     L+  +FT++ +   QF   
Sbjct: 355 LSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARR 414

Query: 395 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           + AG   IND  V+   H +PFGG + SG+G ++G+++ + F+  K +
Sbjct: 415 IDAGMTHINDQPVNDEPH-VPFGGEKNSGLGRFNGEWALEEFTTDKWI 461

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  166 bits (422), Expect = 4e-46
 Identities = 108/324 (33%), Positives = 175/324 (54%), Gaps = 14/324 (4%)

Query: 113 AEIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 166
           A  V EP GVV  I+P+N+P          AIA GN++V+KPS   P ++  LAK++ E 
Sbjct: 117 AFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEA 176

Query: 167 -MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 223
            +    I VV G  +E    +  + K + I +TG++ V  ++ + A      V LELGG 
Sbjct: 177 GLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGS 236

Query: 224 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 283
            P++     +L+ A    + G++  N GQ C +   I+  ++   K L+ L  +++    
Sbjct: 237 DPMIVLKDADLERAVSIAVRGRF-ENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKV 295

Query: 284 KNPL-ESKDLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERDKNKLRIAPTLLLDVPRD 341
            +PL ES DL  +++     R+  L++D  +  GKI++GG+RD+      PT+L +   D
Sbjct: 296 GDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSF-FPPTVLENDTPD 354

Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
            ++M EE+FGP+LPI  V   E++ +I NS    L A +FTN+     +    + AGG+V
Sbjct: 355 MIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVV 414

Query: 402 INDTAVHLAVHSLPFGGVQESGMG 425
           IND+       +LPFGG ++SG+G
Sbjct: 415 INDSTR-FRWDNLPFGGFKKSGIG 437

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  166 bits (423), Expect = 4e-46
 Identities = 93/341 (27%), Positives = 169/341 (49%), Gaps = 22/341 (6%)

Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
            P GVV  I PWN+PFF+       A+  GN +V+KPSE  P ++   A+LV E   L +
Sbjct: 132 VPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDE-AGLPA 190

Query: 172 --IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 227
             + +V G  +     L    K   I  TG++   + +M AAA+++T V LELGGK+P +
Sbjct: 191 GVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAI 250

Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 287
                +L +A + ++  +   N GQ C   + +   +D   + +E L  +++     +P 
Sbjct: 251 VMKDADLDLAVKAIVDSRII-NCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPF 309

Query: 288 ESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK--LRIAPTLLLDVPRDSL 343
           ++  D+  +VN     ++ ++++    +G  ++ GG+R + +      PT+L +V +D  
Sbjct: 310 DAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDME 369

Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
           I+ EEIFGP+LP++    ++++ ++ N     L +Y++T N     +    +  G   IN
Sbjct: 370 IVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYIN 429

Query: 404 DTA--VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
                     H+    G ++SG+G   GK   + +   K V
Sbjct: 430 RENFEAMQGFHA----GWKKSGLGGADGKHGLEEYLQTKVV 466

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  164 bits (417), Expect = 1e-45
 Identities = 119/453 (26%), Positives = 189/453 (41%), Gaps = 75/453 (16%)

Query: 29  TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
            F + +  S+  R + L+ L  +L ER+ ++   +  ++ KP +  +  EV       K 
Sbjct: 11  AFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKP-IAEARAEVE------KC 63

Query: 89  AL------KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYP------FFVG 136
           A       +  + ++  E     I T    A +  EP GVVL I PWN+P      F   
Sbjct: 64  AWICRYYAENAEAFLADEP----IETDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAP 119

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDL-SSIRVVEGAVAETSALLDQ 188
            + AGN ++LK +   P  +  + +L        G + +L      VE  +A      D 
Sbjct: 120 NLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIA------DP 173

Query: 189 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINL----KVACR-RMI 242
           +   +  TG+ R  R V A A K+L   +LELGG  P +V D   +L    K A + R+ 
Sbjct: 174 RVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDA-DLDKAVKTAVKGRLQ 232

Query: 243 MGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-----------YGKNPLESKD 291
                 N GQ+CI+    I  +D   + LE     +               G  PL  KD
Sbjct: 233 ------NAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLG--PLARKD 284

Query: 292 LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEI 349
           L           L + +++   +G  ++ GG+R D       PT+L DV        EE+
Sbjct: 285 L--------RDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEEL 336

Query: 350 FGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHL 409
           FGP+  ++ V   E++  + N     L   +FT + +  ++    + AG + IN      
Sbjct: 337 FGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSD 396

Query: 410 AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
               LPFGGV+ SG G   G+F    F + K V
Sbjct: 397 P--RLPFGGVKRSGYGRELGRFGIREFVNIKTV 427

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score =  164 bits (418), Expect = 2e-45
 Identities = 102/349 (29%), Positives = 168/349 (48%), Gaps = 21/349 (6%)

Query: 110 PSSAEIVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLV 163
           P    +  EP GVV  I+PWN+PFF+       A+AAGN +VLKP+   P S+ LL +++
Sbjct: 114 PGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEII 173

Query: 164 GEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLE 219
            E  DL +  + VV G+       L  D + D + +TG++ V R +MA AA  L  VLLE
Sbjct: 174 AE-TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLE 232

Query: 220 LGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL 278
           LGGKS  +V D   +L  A    +      N GQ C     ++  +    +++E+L    
Sbjct: 233 LGGKSANIVLD-DADLAAAAPAAVGV-CMHNAGQGCALTTRLLVPRSRYDEVVEALAAAF 290

Query: 279 ENFYGKNPLESKDLS-RIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPT 333
           E     +P +   +   ++++    R+   +   +  G ++V GG R     +   + PT
Sbjct: 291 EALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPT 350

Query: 334 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 393
           L  DV  D  I  EEIFGP+L ++  D  +++  I N     L+  +++ +     +   
Sbjct: 351 LFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVAR 410

Query: 394 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            +  G + IN         + PFGG ++SG+G  +G    + F   K++
Sbjct: 411 RIRTGSVGIN-GGGGYGPDA-PFGGYKQSGLGRENGIEGLEEFLETKSI 457

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score =  164 bits (417), Expect = 3e-45
 Identities = 121/455 (26%), Positives = 202/455 (44%), Gaps = 52/455 (11%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           D + A   V   R  F +    S   R + L+ + +    R  ++  A+  ++  P   +
Sbjct: 37  DVDRA---VAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPITLA 93

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF- 133
              +V L    +++A   LK                 ++ +V EP GV  +I+PWN+P  
Sbjct: 94  RAAQVGLGIGHLRAAADALK--------DFEFEERRGNSLVVREPIGVCGLITPWNWPLN 145

Query: 134 -----FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL 186
                   A+AAG  +VLKPSEVAP S+ +LA+++ E   L +    +V G        L
Sbjct: 146 QIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDE-AGLPAGVFNLVNGDGPVVGEAL 204

Query: 187 --DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIM 243
                 D + +TG++R  + V  AAA  +  V LELGGKS  ++ D   +L+ A  R + 
Sbjct: 205 SAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILDDA-DLEKAVPRGVA 263

Query: 244 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKD-LSRIVNSNHFA 302
             +  N+GQ+C +P  ++  +    +  E      E +   +P +    L  + ++  F 
Sbjct: 264 ACFA-NSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQF- 321

Query: 303 RLSKLLDDDKVSGKI----------VHGG-ERDKNKLR---IAPTLLLDVPRDSLIMSEE 348
                   D+V G I          V GG  R +   R   + PT+  DV  D  I  EE
Sbjct: 322 --------DRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREE 373

Query: 349 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 408
           IFGP+L I+  D  +++  I N     LA Y+++ + +  +     + AG + IN  A +
Sbjct: 374 IFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAAFN 433

Query: 409 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
                 PFGG ++SG G   G++  + F   K++ 
Sbjct: 434 PG---APFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score =  162 bits (413), Expect = 7e-45
 Identities = 96/355 (27%), Positives = 167/355 (47%), Gaps = 25/355 (7%)

Query: 110 PSSAEIVP--------EPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPAS 155
           P++ E +P        EP GVV  I+PWNYP          A+AAGN +VLKPSE  P +
Sbjct: 101 PAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160

Query: 156 SSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHL 213
           + LLA+L  E +    + VV G  A     L    +   +  TG+ R  + V  AAA  L
Sbjct: 161 TLLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTL 220

Query: 214 TPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 272
             V LELGGK+PV VFD   +L  A   +    +  N GQ C +   +   +    + + 
Sbjct: 221 KRVHLELGGKAPVIVFDD-ADLDAAVAGIATAGY-YNAGQDCTAACRVYVHESVYDEFVA 278

Query: 273 SLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRI 330
           +L   +     G    E  ++  + ++    R++  ++      +++ GG R +      
Sbjct: 279 ALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFY 338

Query: 331 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 390
            PT++  V +D  I+ EEIFGP++ +   D  +++ ++ N     LA+ ++T +     +
Sbjct: 339 EPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMR 398

Query: 391 FVETVSAGGLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 444
               +  G + +N    H+ + + +P GG ++SG G     ++ + ++  K V+ 
Sbjct: 399 LSARLDFGTVWVNT---HIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  162 bits (411), Expect = 1e-44
 Identities = 94/322 (29%), Positives = 151/322 (46%), Gaps = 15/322 (4%)

Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 171
           P GVV +ISP+N+P  +       A+A GNA+VLKP    P S  ++   + E   L + 
Sbjct: 110 PLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAG 169

Query: 172 -IRVVEGAVAETSAL-LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
            + V+ G      AL  D     I +TG++ V R V  AA +HL  V LELGGK+ ++  
Sbjct: 170 VLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVL 229

Query: 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLES 289
              +L +A      G +  + GQ C++    +  +  A      L  + ++    +P   
Sbjct: 230 DDADLDLAASNGAWGAFL-HQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATG 288

Query: 290 K-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 347
           +  L  ++N+    R+  ++DD   +G ++  GG  D   L   PT+L  V        E
Sbjct: 289 QVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTYDG--LFYRPTVLSGVKPGMPAFDE 346

Query: 348 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 407
           EIFGP+ P+   D  E++  + N     L+A + + +        + +  G L IND  V
Sbjct: 347 EIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTV 406

Query: 408 HLAVHSLPFGGVQESGMGAYHG 429
           +   H+ PFGG+  SG G+  G
Sbjct: 407 NDEPHN-PFGGMGASGNGSRFG 427

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  161 bits (409), Expect = 4e-44
 Identities = 94/343 (27%), Positives = 160/343 (46%), Gaps = 23/343 (6%)

Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
           P GVV +I+PWN+P  +       A+  GN +V KP+E  PA +  L +L  E  +    
Sbjct: 135 PIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGV 194

Query: 172 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
           + VV G   E    L +    D + +TG++ V   +    A+    V LE+GGK+P++  
Sbjct: 195 VNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVM 254

Query: 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLES 289
              +L +A    +   +G   GQ C +   +I  +    + L+      +     + L+ 
Sbjct: 255 DDADLDLALEGALWSAFG-TTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDE 313

Query: 290 K-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLR----IAPTLLLDVPRDS 342
           + D+  ++N     ++    +  K  G  ++ GGER           + PT+  DV  D 
Sbjct: 314 ETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDM 373

Query: 343 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 402
            I  EEIFGP++ ++ V  +E++ +I N     L++ ++T +     +    + AG   +
Sbjct: 374 RIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYV 433

Query: 403 NDTAVHLAVHSLPFGGVQESGMGAYH---GKFSFDVFSHKKAV 442
           N   +   VH LPFGGV++SG G  H   G  + D F+  KAV
Sbjct: 434 NAPTIGAEVH-LPFGGVKKSGNG--HREAGTTALDAFTEWKAV 473

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score =  160 bits (406), Expect = 8e-44
 Identities = 106/348 (30%), Positives = 170/348 (48%), Gaps = 21/348 (6%)

Query: 110 PSSAEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLV 163
           PS A  + EP GV + I  WNYP  +       A+AAGNA+V KPSE  P ++  +A+++
Sbjct: 124 PSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIM 183

Query: 164 GEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 220
            E  +      VV+G  AE   LL       K+ +TG     + +MAAAA HL  V +EL
Sbjct: 184 EEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVTMEL 243

Query: 221 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 279
           GGKSP +VFD   +L+ A    ++G +  + GQ C +   +   K    + L  L    E
Sbjct: 244 GGKSPLIVFDDA-DLESAVDGAMLGNF-FSAGQVCSNGTRVFVHKKIKERFLARLVERTE 301

Query: 280 NFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-----LRIAP 332
                +P  E+ ++  ++++ H  ++   ++  K  G  +  GG R +N        + P
Sbjct: 302 RIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEP 361

Query: 333 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 392
           T+  D   D  I+ EEIFGP++ +LT    ++     N     LA  +FT +     +  
Sbjct: 362 TVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVA 421

Query: 393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 440
           + + AG + IN    +L     PFGG ++SG+G  +GK +   ++  K
Sbjct: 422 DQLEAGTVWINT--YNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score =  160 bits (406), Expect = 9e-44
 Identities = 101/350 (28%), Positives = 161/350 (46%), Gaps = 21/350 (6%)

Query: 113 AEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY 166
           +    EP GVV  I PWN+P  +       A+AAGN +VLKP+   P S  +L +L+G+ 
Sbjct: 130 SYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL 189

Query: 167 MDLSSIRVVEGAVAET-SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 224
           +    + VV G  +E    L       K+ +TG++ V R++M  AA++L PV LELGGKS
Sbjct: 190 LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKS 249

Query: 225 P-VVFDSGINLKVA-CRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELEN 280
           P + FD  ++       +   G+ G   N G+ C  P   +  +    + +E      E 
Sbjct: 250 PNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEA 309

Query: 281 FYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-----DKNKLRIAPT 333
               NPL+ +  +   V+ +   ++   +D  K  G +++ GGER             PT
Sbjct: 310 IKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPT 369

Query: 334 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 393
           L+     D  I  EEIFGP+L ++T    E++  I N     L   ++T +     +   
Sbjct: 370 LIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVAR 429

Query: 394 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
            +  G + +N    H      PFGG ++SG+G    K   D +   K +L
Sbjct: 430 GIQTGRVWVN--CYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNIL 477

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  160 bits (406), Expect = 1e-43
 Identities = 106/362 (29%), Positives = 175/362 (48%), Gaps = 36/362 (9%)

Query: 108 TFPSS-----AEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASS 156
           T PS+      E   EP GVV +I+PWN+P  +       A+A GN +V KP+E+ PAS+
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178

Query: 157 SLLAKLVGEY--------MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAA 208
             L +++ E         + + S   V  A+ E   +     D + +TG++ V R + AA
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDV-----DAVSFTGSTAVGRRIAAA 233

Query: 209 AAKHLTPVLLELGGKSP-VVFDSG-INLKVACRRMIMGKWGCNNGQACISPDHIITTKDY 266
           AA     V LE+GGK+P VV D   ++L V C   + G +  + GQ C +   +I T+  
Sbjct: 234 AAARGARVQLEMGGKNPLVVLDDADLDLAVEC--AVQGAFF-STGQRCTASSRLIVTEGI 290

Query: 267 APKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD 324
             + +E+L    +     + L+   D+  +V+     +  + ++  +  G K+V+GGER 
Sbjct: 291 HDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERL 350

Query: 325 KNKLR---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF 381
           K       +AP L   V  D  I  EEIFGP+  ++ V   +++  I N     L+A + 
Sbjct: 351 KRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIV 410

Query: 382 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAY-HGKFSFDVFSHKK 440
           T + K    F   V AG +++N     +  H +PFGG + S  G    G+ + + ++  K
Sbjct: 411 TTSLKHATHFKRRVEAGVVMVNLPTAGVDYH-VPFGGRKGSSYGPREQGEAALEFYTTIK 469

Query: 441 AV 442
            V
Sbjct: 470 TV 471

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  158 bits (401), Expect = 4e-43
 Identities = 105/345 (30%), Positives = 169/345 (48%), Gaps = 21/345 (6%)

Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP GV   I  WNYP  +       A+A GNA+V KPS   P ++ LLA+++ E  +   
Sbjct: 115 EPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDG 174

Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
              VV+G   ET  LL +  D  K+ +TG+    + VM+AAAK +  V LELGGKSP++ 
Sbjct: 175 VFNVVQGG-GETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLII 233

Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL- 287
               +L+ A    +M  +  + GQ C +   +   +    +  E L    +     +PL 
Sbjct: 234 FDDADLENAVNGAMMANF-LSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLD 292

Query: 288 ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--DKNKLR----IAPTLLLDVPR 340
           E   +  +++  H  ++   ++  K  G K++ GGER   ++ L     ++P +L D   
Sbjct: 293 EDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTD 352

Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
           D  I+ EEIFGP++ IL  D  E+     N  T  LAA +FT + +   + +  + AG  
Sbjct: 353 DMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTC 412

Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445
            IN   +      +PFGG ++SG G  +G  + + ++  K V   
Sbjct: 413 WINTYNISPV--EVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score =  158 bits (402), Expect = 4e-43
 Identities = 113/343 (32%), Positives = 175/343 (51%), Gaps = 26/343 (7%)

Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP GV   I PWN+P  +       A+AAGN +VLKPSE+ P S+  + KL+ E      
Sbjct: 143 EPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPG 202

Query: 171 SIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP-V 226
            I VV G        +      DK+ +TG++ V R VM AAAK +L  V LELGGKSP +
Sbjct: 203 VINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNI 262

Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESL-----KNELENF 281
           VFD   +L+ A      G +  N+GQ C +   I   +    K ++       K ++ + 
Sbjct: 263 VFDDA-DLESAVVWTAYGIF-FNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDP 320

Query: 282 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH-GGERDKNK-LRIAPTLLLDVP 339
           + ++  +   +S+I     + R+   ++  K  G  V  GG+R  N+   I PT+  DV 
Sbjct: 321 FAEDTFQGPQVSQI----QYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVT 376

Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
            D  I+ EEIFGP++ ++     E++    N  T  LAA +FTNN     +    + AG 
Sbjct: 377 EDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGT 436

Query: 400 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           + +N    +L  H +PFGG ++SG+G   G+++ + ++  KAV
Sbjct: 437 VWVN--CYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  158 bits (401), Expect = 8e-43
 Identities = 108/341 (31%), Positives = 172/341 (50%), Gaps = 17/341 (4%)

Query: 115 IVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 167
           ++ +P GVV  I+PWN+P       VG A+AAG  +V+KPSE+ P ++   A+L  +  +
Sbjct: 156 VLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGI 215

Query: 168 DLSSIRVVEG-AVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 225
               + VV G A     ALL   K  KI +TG++ V + +MA AA  +  V LELGG +P
Sbjct: 216 PPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAP 275

Query: 226 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 284
            +VFD   +L VA +  +  K+  N+GQ C+  + I+  +    K  E+    ++     
Sbjct: 276 FIVFDDA-DLDVAVKGALASKFR-NSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVG 333

Query: 285 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI-APTLLLDVPRD 341
           +  E       ++N     ++   + D    G K++ GG+R         PT+L DV  D
Sbjct: 334 DGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTED 393

Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
            LI  EE+FGP+ P+      E++  I N     LAAY+FT + +   +  E +  G + 
Sbjct: 394 MLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVG 453

Query: 402 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           +N+  +   V   PFGGV++SG+G    K+  D +   K V
Sbjct: 454 VNEGLISTEV--APFGGVKQSGLGREGSKYGIDEYLEIKYV 492

Length = 498

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  153 bits (388), Expect = 4e-41
 Identities = 102/351 (29%), Positives = 166/351 (47%), Gaps = 29/351 (8%)

Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 171
           P G V +I+PWN PF +       A+A GN +VLKP+E +P +++ LA++  E   L   
Sbjct: 135 PVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKE-AGLPDG 193

Query: 172 -IRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-V 227
              +V G   E    L    D   + +TG +    I+M   A  L    +ELGGKSPV V
Sbjct: 194 VFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIV 253

Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 287
           FD   +L+ A   ++   +   NG+ C +   ++  +  A   +E L   +      +PL
Sbjct: 254 FDDA-DLERALDAVVFMIFS-FNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPL 311

Query: 288 E-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR--------IAPTLLLD 337
           +   ++  +++  H A++   ++  +  G  I+ GGER              + PT+   
Sbjct: 312 DPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTG 371

Query: 338 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
                 I  EEIFGP+L ++     E++ +  N     LA Y++TN+     +    + A
Sbjct: 372 ADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEA 431

Query: 398 GGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV-LSRG 446
           G + +N   V HL     PFGGV+ SG+G   G +SFD ++  K V L+ G
Sbjct: 432 GMIWVNSQNVRHLPT---PFGGVKASGIGREGGTYSFDFYTETKNVALALG 479

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score =  152 bits (386), Expect = 6e-41
 Identities = 107/368 (29%), Positives = 176/368 (47%), Gaps = 22/368 (5%)

Query: 96  WMTPEKAKTSITTFPS------SAEIVPEPFGVVLIISPWNYPFFVG------AIAAGNA 143
           W T    +T   + PS      +A    EP GVV  I PWN+   +       A+A G  
Sbjct: 113 WATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCT 172

Query: 144 LVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRV 201
           +V+KPSE  P +   +A+L  E  +    + VV G  A  + L+      K+ +TG+   
Sbjct: 173 IVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVAT 232

Query: 202 ARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 261
            + +   AA  LT V LELGGK+   F    ++      ++   +  + GQ C +P+   
Sbjct: 233 GKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGF-LHQGQVCAAPERFY 291

Query: 262 TTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVH 319
             +    +L+  LK  L +F   +P+ ES     + N  HF ++   LDD +  G +IV 
Sbjct: 292 VHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVR 351

Query: 320 GGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 378
           GGE        + PTL+L    DS +M EE FGP++  +  +  E+   +IN     L A
Sbjct: 352 GGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTA 411

Query: 379 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH-SLPFGGVQESGMGAYHGKFSFDVFS 437
            ++TNN     +++  + AG + +N   +H  +  ++PFGG+++SG+G   G    D ++
Sbjct: 412 SVWTNNLSKALRYIPRIEAGTVWVN---MHTFLDPAVPFGGMKQSGIGREFGSAFIDDYT 468

Query: 438 HKKAVLSR 445
             K+V+ R
Sbjct: 469 ELKSVMIR 476

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score =  151 bits (384), Expect = 9e-41
 Identities = 99/360 (27%), Positives = 168/360 (46%), Gaps = 47/360 (13%)

Query: 113 AEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY 166
           A I  EP GVV  + PWN+P  +       A+AAGN++VLKP+E +P ++  LA+L  E 
Sbjct: 118 ALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALE- 176

Query: 167 MDLSSI-----RVVEGAVAET-SAL-LDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLL 218
              + +      VV G       AL L    D + +TG++ V R  +  + + +L  V L
Sbjct: 177 ---AGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL 233

Query: 219 ELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE 277
           E GGKSP +VF    +L  A      G +  N G+ C +   ++  +    + LE +   
Sbjct: 234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFW-NQGEVCSAGSRLLVHESIKDEFLEKVVAA 292

Query: 278 LENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAP 332
              +   +PL+ +  +  +V+  HF ++   ++  K  G ++V GG+R   +     + P
Sbjct: 293 AREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEP 352

Query: 333 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-------- 384
           T+   V  D  I  EEIFGP+L ++T D  E++  + N     LAA ++T++        
Sbjct: 353 TVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVA 412

Query: 385 KKLK--QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           ++L+    +V     G +            + PFGG ++SG G      + D ++  K  
Sbjct: 413 RRLRAGTVWVNCFDEGDI------------TTPFGGFKQSGNGRDKSLHALDKYTELKTT 460

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  150 bits (382), Expect = 2e-40
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 31/331 (9%)

Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 172
           P GVV  I PWN+P  +       A+ AGN +VLKPS   P  +  L +L  E +    +
Sbjct: 114 PLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEVLPPGVL 173

Query: 173 RVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFD 229
            VV G   E    L       KI +TG++   + VMA+AAK L  V LELGG    +V  
Sbjct: 174 NVVSGG-DELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLP 232

Query: 230 SGINLKVACRRMIMGKWGCNNGQACIS------PDHIITTKDYAPKLLESLKNELENFYG 283
             +++     ++  G +  N+GQ C +       + I     Y  +  E+L    +    
Sbjct: 233 -DVDIDAVAPKLFWGAFI-NSGQVCAAIKRLYVHESI-----YD-EFCEALVALAKAAVV 284

Query: 284 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPR 340
            + L+    L  + N   + ++ +L++D K  G K++ GGE        I PT++ D P 
Sbjct: 285 GDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPE 344

Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
            S I+ EE FGP+LP+L     ++     N     L A +++++ +  +     + AG +
Sbjct: 345 GSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTV 404

Query: 401 VINDTAVHLAVH-SLPFGGVQESGMGAYHGK 430
            IN    H A+    PFGG ++SG+G   G 
Sbjct: 405 WINT---HGALDPDAPFGGHKQSGIGVEFGI 432

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score =  150 bits (380), Expect = 4e-40
 Identities = 106/345 (30%), Positives = 164/345 (47%), Gaps = 20/345 (5%)

Query: 115 IVPEPFGVVLIISPWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
           ++ EP GVV  I PWN+PF + A      +AAGN +V+KPS     S   LAK++ + + 
Sbjct: 132 VLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDVLP 191

Query: 169 LSSIRVVEGAVAET-SALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 226
              + +V G  +++   LL+    DK+ +TG++ V R V  AAAK L P  LELGGKS  
Sbjct: 192 KGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSAN 251

Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 286
           +     N   A     +G    N GQ C +   I   +    + +  LK + EN    NP
Sbjct: 252 IIFDDANWDKALEGAQLGIL-FNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNP 310

Query: 287 LE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER------DKNKLRIAPTLLLDV 338
           L+    +   VN +   ++   +D  K  G KI+ GG R      DK    I PTL+++V
Sbjct: 311 LDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFF-IEPTLIVNV 369

Query: 339 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 398
             D  +  EEIFGP+  ++     ++  D+ N     L   +FT +     +    V  G
Sbjct: 370 TNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETG 429

Query: 399 GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
            + +N T   +   + PFGG ++SG+G    K   D ++  K + 
Sbjct: 430 RVWVN-TYNQIPAGA-PFGGYKKSGIGRETHKSMLDAYTQMKNIY 472

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score =  149 bits (379), Expect = 4e-40
 Identities = 94/343 (27%), Positives = 151/343 (44%), Gaps = 23/343 (6%)

Query: 118 EPFGVVLIISPWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           EP+GVV  I  +N+P    A      +AAGN +V+KP E AP S+  LA+L  E +    
Sbjct: 115 EPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREVLPPGV 174

Query: 172 IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
             ++ G  A   A L       +I   G+    R +M AAA+ +  V LELGGK+ ++  
Sbjct: 175 FNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVF 234

Query: 230 SGINLKVACRRMIMG---KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 286
              + + A    + G    W    GQ+C S   +   +    ++L  +   +      +P
Sbjct: 235 PDADPEAAADAAVAGMNFTW---CGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDP 291

Query: 287 L-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKL-----RIAPTLLLDVP 339
              +  +  +V+   + R+   +D  K  G ++V GG R +         + PT+  DV 
Sbjct: 292 TDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVT 351

Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
               I  EEIFGP+L +L      +     N     L A ++TN+     +    V AG 
Sbjct: 352 PGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGY 411

Query: 400 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           + IN ++ H      PFGGV+ SG+G          ++ +K V
Sbjct: 412 VWINGSSRHFL--GAPFGGVKNSGIGREECLEELLSYTQEKNV 452

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score =  150 bits (381), Expect = 5e-40
 Identities = 141/478 (29%), Positives = 221/478 (46%), Gaps = 53/478 (11%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYG-----WRVSQLKSLMKMLNEREPDIVDALRQDLDK 69
           D +AA   V+  R  F   K K +       R   L+++   + ER+ ++      D  K
Sbjct: 46  DVDAA---VEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGK 102

Query: 70  P--ELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSI----TTFPSSAEIVPEPFGVV 123
           P  E    + +VA          + L       K K  +     TF     ++ EP GVV
Sbjct: 103 PLDEAAWDMDDVAGCFEYYADLAEALD-----AKQKAPVSLPMETFKGY--VLKEPLGVV 155

Query: 124 LIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVE 176
            +I+PWNYP  +       A+AAG   VLKPSE+A  +   LA +  E  +    + VV 
Sbjct: 156 GLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVT 215

Query: 177 GAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGIN 233
           G   E  A L      DKI +TG++   R +M AAA+ + PV LELGGKSP +VFD  ++
Sbjct: 216 GLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVFDD-VD 274

Query: 234 LKVACRRMIMGKW---GC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE 288
           L  A       +W   GC   NGQ C +   ++  +  A + LE L    +N    +PLE
Sbjct: 275 LDKAV------EWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLE 328

Query: 289 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPTLLLDVPRDSL 343
               L  +V+   + ++ K +   K  G  I+ GG+R ++  +   I PT++ DV     
Sbjct: 329 EGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQ 388

Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
           I  EE+FGP+L + T    +++ ++ N     LA  + +N+ +  ++  E   AG + IN
Sbjct: 389 IWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWIN 448

Query: 404 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVR-YPPYTK 460
            +         P+GG++ SG G   G++  + +   K V    +I D P   YPP +K
Sbjct: 449 CSQPCFC--QAPWGGIKRSGFGRELGEWGLENYLSVKQVTK--YISDEPWGWYPPPSK 502

Length = 503

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score =  147 bits (373), Expect = 3e-39
 Identities = 90/351 (25%), Positives = 156/351 (44%), Gaps = 18/351 (5%)

Query: 94  KHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLK 147
           +  + P + + +I     +      P GVV +ISPWNYP  +       A+ AGNA+VLK
Sbjct: 94  ERLLKPRRRRGAIPVLTRTTVNR-RPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLK 152

Query: 148 PSEVAPASSSLLAKLV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARI 204
           P      ++    +L+   G   DL  +    G+     A++D   D + +TG++   R+
Sbjct: 153 PDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEV-GGAIVDNA-DYVMFTGSTATGRV 210

Query: 205 VMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 264
           V   A + L    LELGGK+P++     +L  A    +   +  N GQ C+S + I   +
Sbjct: 211 VAERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFS-NAGQLCVSIERIYVHE 269

Query: 265 DYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 323
               + +               L+   D+  +++     R++  +DD    G  V  G R
Sbjct: 270 SVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGR 329

Query: 324 ---DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 380
              D       PT+L  V  D  + +EE FGP++ I  V   +++ ++ N     L A +
Sbjct: 330 ARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASV 389

Query: 381 FTNNKKLKQQFVETVSAGGLVINDT-AVHLAVHSLPFGGVQESGMGAYHGK 430
           +T +    ++    + AG + +N+  A   A    P GG+++SG+G  HG 
Sbjct: 390 WTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGA 440

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  147 bits (372), Expect = 3e-39
 Identities = 115/431 (26%), Positives = 194/431 (45%), Gaps = 40/431 (9%)

Query: 29  TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
            F + +  +   R S L+    ++ E + D+   +  +  KP L+ +  E+    + ++ 
Sbjct: 31  AFKTWRATTAKERSSLLRKWYNLMMENKDDLARLITLENGKP-LKEAKGEILYAASFLE- 88

Query: 89  ALKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFFV------GA 137
                  W   E  +    T PS        ++ +P GV   I+PWN+P  +       A
Sbjct: 89  -------WFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGVCAAITPWNFPAAMITRKAGAA 141

Query: 138 IAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRVVE-GAVAETSALLDQK 189
           +AAG  +V+KP+E  P S+  LA+L        G    ++  R  E G V  TS L+   
Sbjct: 142 LAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGNVLTTSPLVR-- 199

Query: 190 WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGC 248
             KI +TG++ V +I+M  +A  +  V +ELGG +P +VFD   +L  A    +  K+  
Sbjct: 200 --KISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA-DLDQAVEGAMASKFR- 255

Query: 249 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKL 307
           N GQ C+  + +        +  + L   ++     N L+       ++N     ++ K 
Sbjct: 256 NAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKH 315

Query: 308 LDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 365
           + D    G K+V GG+R +       PT+L +V  D L+  EE FGPL P+   D  E+ 
Sbjct: 316 IADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEV 375

Query: 366 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 425
             I N     LAAY F+ +     +  E +  G + IN   +  +    PFGGV++SG+G
Sbjct: 376 IAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLI--SNVVAPFGGVKQSGLG 433

Query: 426 AYHGKFSFDVF 436
               K+  + +
Sbjct: 434 REGSKYGIEEY 444

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score =  145 bits (369), Expect = 2e-38
 Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 23/348 (6%)

Query: 115 IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
            V EP GV  +I+PWNYP          A+AAGN +V+KPSEV P ++  L +L+ E   
Sbjct: 130 TVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEE-AG 188

Query: 169 L--SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 224
           L    + +V G+ A   A L      D + +TG +   R +M AAA ++  V LELGGK+
Sbjct: 189 LPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKN 248

Query: 225 P-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 283
           P +VF    + + A  + + G +  N GQ C +   ++  +    K + +L    +    
Sbjct: 249 PNIVFADA-DFETAVDQALNGVF-FNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKL 306

Query: 284 KNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLR----IAPTLLL 336
            N L    ++  +V++ H  ++   +   K  G ++V GG+R   ++L     + PT+  
Sbjct: 307 GNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFD 366

Query: 337 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 396
           DV R   I+ EEIFGP+L +   D  E++  + N     LA  ++T +     +    + 
Sbjct: 367 DVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLR 426

Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 444
           AG + IND   H      P+GG ++SG+G   G    + +   K +  
Sbjct: 427 AGTVWIND--YHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHINI 472

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score =  144 bits (366), Expect = 4e-38
 Identities = 131/448 (29%), Positives = 196/448 (43%), Gaps = 30/448 (6%)

Query: 15  DAEAASLFVKELRGTFASGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQ-DLDKPEL 72
           DAE     VK  R  F  G   +  G+  S++      L E+  D + AL   D  KP  
Sbjct: 39  DAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPYE 98

Query: 73  ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYP 132
           ++   EV L         +    W       T     P     + EP GVV  I PWN+P
Sbjct: 99  QARYAEVPLAA----RLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFP 154

Query: 133 FF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSAL 185
                  VG A+A GN +VLKP+E  P S+ L AKL  E  +    + +V G      A 
Sbjct: 155 LLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAA 214

Query: 186 LDQKW--DKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP-VVF-DSGINLKVACRR 240
           +      DK+ +TG++ V +I+M  AAK +L PV LELGGKSP +V  D+ ++  V    
Sbjct: 215 IASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAH 274

Query: 241 MIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVN 297
                     N GQ C +       +    + +E  K         +P     +    V+
Sbjct: 275 F-----ALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVD 329

Query: 298 SNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLP 355
              F ++   ++  K  G  ++ GG+R  +K   I PT+  DV  D  I  +EIFGP+  
Sbjct: 330 KEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQS 389

Query: 356 ILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 415
           IL    +++     N+    LAA +F+ N          + AG + +N   V  A  S+P
Sbjct: 390 ILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDA--SIP 447

Query: 416 FGGVQESGMGAYHGKFSFDVFSHKKAVL 443
           FGG + SG+G   G ++ + +   KAV+
Sbjct: 448 FGGYKMSGIGREKGIYALNNYLQVKAVV 475

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score =  144 bits (365), Expect = 4e-38
 Identities = 105/462 (22%), Positives = 187/462 (40%), Gaps = 52/462 (11%)

Query: 13  VFDAEAASLFVKELRGTFASGKTKSYGW-------RVSQLKSLMKMLNEREPDIVDALRQ 65
           + +   ASL    +R      +    GW       R + +   +++L     +I + L  
Sbjct: 9   IAERPLASLE--AVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTW 66

Query: 66  DLDKPELESSIYEVALLKTSIKSALKELKHWM--TPEKAKTSITTFPSSAE--IVPEPFG 121
            + +P        +A     I+  L+  ++ +    E             E  I  EP G
Sbjct: 67  QMGRP--------IAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLG 118

Query: 122 VVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKL---VGEYMDLSSI 172
           VVLII+PWNYP+         A+ AGNA++LK S   P      A      G    +   
Sbjct: 119 VVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGV--F 176

Query: 173 RVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 231
           +V+  +   ++AL+     D + +TG+    R +  AAA     V LELGGK P      
Sbjct: 177 QVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPD 236

Query: 232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK- 290
            +L  A   ++ G +  N+GQ+C S + I   +      +E+    ++ +   +PL+   
Sbjct: 237 ADLDAAAESLVDGAF-FNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPST 295

Query: 291 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR-----IAPTLLLDVPRDSLIM 345
            L  +V++     +   + D    G           + +     +APT+L +V     +M
Sbjct: 296 TLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVM 355

Query: 346 SEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN-- 403
            EE FGP++ I+ V    ++  ++N     L A ++T +    +   E +  G + +N  
Sbjct: 356 REETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRC 415

Query: 404 ---DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
              D A       L + GV++SG G    +  +D  +  K+ 
Sbjct: 416 DYLDPA-------LAWTGVKDSGRGVTLSRLGYDQLTRPKSY 450

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score =  141 bits (358), Expect = 2e-37
 Identities = 92/298 (30%), Positives = 148/298 (49%), Gaps = 26/298 (8%)

Query: 119 PFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 171
             GV   I PWN+PFF+       A+  GN +V+KPSE  P ++   AK+V E + L   
Sbjct: 71  ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE-IGLPKG 129

Query: 172 -IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP--V 226
              +V G        L  + K   +  TG+      +MAAAAK++T V LELGGK+P  V
Sbjct: 130 VFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIV 189

Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 286
           + D+ ++L V   + I+     N+GQ C   + +   K    + +  L   ++     NP
Sbjct: 190 MDDADLDLAV---KAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP 246

Query: 287 LESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDS 342
            E  D++   ++N+    R+ + +      G ++  GG+  + K     PTLLLDV ++ 
Sbjct: 247 AERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEM 306

Query: 343 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-----KKLKQ-QFVET 394
            IM EE FGP+LP++  D +E++  + N     L + ++T N     K +K  +F ET
Sbjct: 307 SIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGET 364

Length = 409

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score =  141 bits (357), Expect = 7e-37
 Identities = 109/431 (25%), Positives = 188/431 (43%), Gaps = 38/431 (8%)

Query: 34  KTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKEL 93
            T     R+  L     +L E + ++ + L  ++ K  L+ ++ EV      I+  ++EL
Sbjct: 56  PTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKT-LKDALKEVDRTIDYIRDTIEEL 114

Query: 94  KHWMTP-------EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAA 140
           K               K  I      A++  EP GVVL I P+NYP        + A+  
Sbjct: 115 KRLDGDSLPGDWFPGTKGKI------AQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIM 168

Query: 141 GNALVLKPSEVAPASSSLLAKLVGEYMDLSS-----IRVVEGAVAETSALL--DQKWDKI 193
           GN +V KP         LL   + E    +      + VV G   E    L    + D I
Sbjct: 169 GNTVVFKP----ATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVI 224

Query: 194 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 253
            +TG++ V   +          ++LELGGK P +     +L++A + ++ G     +GQ 
Sbjct: 225 SFTGSTEVGNRLKKQHPM--KRLVLELGGKDPAIVLPDADLELAAKEIVKGALS-YSGQR 281

Query: 254 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK 312
           C +   ++  +  A +L+E LK E+       P +   D++ +++      +  L+DD  
Sbjct: 282 CTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAV 341

Query: 313 VSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 371
             G  +++GG R+   L I PTLL  V  D  +  EE FGP+LPI+ V+ IE++ ++ N 
Sbjct: 342 AKGATVLNGGGREGGNL-IYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANK 400

Query: 372 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKF 431
               L A +FT +    ++  + +  G + IN           PF G ++SG+G      
Sbjct: 401 SNYGLQASIFTKDINKARKLADALEVGTVNINSKCQR-GPDHFPFLGRKDSGIGTQGIGD 459

Query: 432 SFDVFSHKKAV 442
           +    + +K +
Sbjct: 460 ALRSMTRRKGI 470

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  141 bits (358), Expect = 8e-37
 Identities = 82/330 (24%), Positives = 146/330 (44%), Gaps = 24/330 (7%)

Query: 118 EPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
            P GV  +ISPWN+P          A+  GN +VLKP+E  P  ++ L +++ E  +   
Sbjct: 165 RPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPG 224

Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------HLTPVLLELGG 222
            +  + G   E    L        I +TG+  V   +   AAK       L  V+ E+GG
Sbjct: 225 VVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGG 284

Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 282
           K+ ++ D   +L  A   ++   +G   GQ C +   +I  +    + LE L    +   
Sbjct: 285 KNAIIVDEDADLDEAAEGIVRSAFGFQ-GQKCSACSRVIVHESVYDEFLERLVERTKALK 343

Query: 283 GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---IAPTLLLDV 338
             +P + +  +  +++     R+ + ++  K  G+++ GGE  +       + PT+  DV
Sbjct: 344 VGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADV 403

Query: 339 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 398
           P D  +  EEIFGP+L ++     +++ +I N     L   +F+ + +  ++       G
Sbjct: 404 PPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVG 463

Query: 399 GLVIND--TAVHLAVHSLPFGGVQESGMGA 426
            L  N   T   +     PFGG + SG G+
Sbjct: 464 NLYANRKITGALVGRQ--PFGGFKMSGTGS 491

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  140 bits (355), Expect = 1e-36
 Identities = 99/340 (29%), Positives = 156/340 (45%), Gaps = 20/340 (5%)

Query: 118 EPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP GV   I PWN+P          A+A GN +VLKP+E  P ++  LA L+ E      
Sbjct: 144 EPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPG 203

Query: 171 SIRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 227
            + VV G      A +      DK+ +TG++ V +++  AA K +L  V LELGGKSP +
Sbjct: 204 VVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNI 263

Query: 228 FDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 285
             +  +L  A             N GQ C +       +    + ++      +     N
Sbjct: 264 VFADADLDYAVE---QAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGN 320

Query: 286 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDS 342
           P + K +    ++   F ++ +L++  K  G K+  GG+R  +K   I PT+  DV  D 
Sbjct: 321 PFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDM 380

Query: 343 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 402
            I  EEIFGP+  I     I++  +  N+ T  LAA +FT +      F   + AG + +
Sbjct: 381 RIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWV 440

Query: 403 NDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           N     ++  + PFGG + SG G   G++    ++  K V
Sbjct: 441 N-CYNVVSPQA-PFGGYKMSGNGRELGEYGLQEYTEVKTV 478

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score =  139 bits (352), Expect = 3e-36
 Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 45/346 (13%)

Query: 107 TTFPSSAEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLA 160
            +      +  EP GVV  I PWN P F+       A+AAG  +VLKPS   P  + LLA
Sbjct: 125 GSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLA 184

Query: 161 KLVGEYMDLSSIRVVEGAV------AETSALL--DQKWDKICYTGNSRVARIVMAAAAKH 212
           +   E        +  G V       E    L      DK+ +TG++   R + A   + 
Sbjct: 185 EAAEE------AGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGER 238

Query: 213 LTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLL 271
           L  V LELGGKS  +V D   +L  A   ++      NNGQ C++   I+  +    +++
Sbjct: 239 LARVTLELGGKSAAIVLDDA-DLDAAVPGLVPASLM-NNGQVCVALTRILVPRSRYDEVV 296

Query: 272 ESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR 329
           E+L   +      +PL+ +  +  + ++    R+   +   +  G ++V GG R     R
Sbjct: 297 EALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDR 356

Query: 330 ---IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 386
              + PTL  DV  D  I  EEIFGP+L ++  D  +D+  I N     L+  ++T +  
Sbjct: 357 GWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTAD-- 414

Query: 387 LKQQFVET-------VSAGGLVINDTAVHLAVHSLPFGGVQESGMG 425
                VE        +  G + +N   +       PFGG ++SG+G
Sbjct: 415 -----VERGLAVARRIRTGTVGVNGFRLDFG---APFGGFKQSGIG 452

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  138 bits (349), Expect = 1e-35
 Identities = 85/354 (24%), Positives = 159/354 (44%), Gaps = 43/354 (12%)

Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 171
           P GVV +I+ +N+P  V       A+  GN +V KPSE  P ++  + K++ E ++ +  
Sbjct: 133 PLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGL 192

Query: 172 ----IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 225
               + +V G   +   LL  D +   + +TG++ V R V    A+    VLLELGG + 
Sbjct: 193 PPGVVNLVTGG-GDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNA 251

Query: 226 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN--------- 276
           ++     +L +A R ++    G   GQ C +   +I  +    + LE L           
Sbjct: 252 IIVMDDADLDLAVRAVLFAAVG-TAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGD 310

Query: 277 --ELENFYGKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---I 330
             +     G  PL ++  + + +N+   A+           G ++ GG+R         +
Sbjct: 311 PLDEGTLVG--PLINQAAVEKYLNAIEIAK--------SQGGTVLTGGKRIDGGEPGNYV 360

Query: 331 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 390
            PT++  V  D+ I+ EE F P+L ++  D +E++  I N   + L++ +FT + +   +
Sbjct: 361 EPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFR 420

Query: 391 FVE-TVSAGGLV-INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           ++    S  G+V +N       +    FGG +E+G G   G  ++  +  +   
Sbjct: 421 WLGPKGSDCGIVNVNIPTSGAEIG-GAFGGEKETGGGRESGSDAWKQYMRRSTC 473

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score =  138 bits (348), Expect = 1e-35
 Identities = 103/348 (29%), Positives = 178/348 (51%), Gaps = 28/348 (8%)

Query: 116 VPEPFGVVLIISPWNYP---FFVG---AIAAGNALVLKPSEVAPASS---SLLAKLVGEY 166
           + EP GVV  I PWN+P   FF+    A+AAG  +V+KP+E  P S+   + LAKL G  
Sbjct: 155 LKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAG-- 212

Query: 167 MDLSSIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELG 221
           +    I VV G    A A  ++ +D   DK+ +TG++ V R +M AAA  +L  V LELG
Sbjct: 213 VPDGVINVVTGFGPTAGAAIASHMDV--DKVSFTGSTEVGRKIMQAAATSNLKQVSLELG 270

Query: 222 GKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN 280
           GKSP+ +FD   ++ +A    ++G +  N G+ C++   +   +    + ++ L  + ++
Sbjct: 271 GKSPLLIFDDA-DVDMAVDLALLGIF-YNKGEICVASSRVYVQEGIYDEFVKKLVEKAKD 328

Query: 281 FYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLD 337
           +   +P + +      V+   F ++   ++  K  G  ++ GG+   +K   I PT+  D
Sbjct: 329 WVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTD 388

Query: 338 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
           V  D  I  +EIFGP++ ++    +E++    N+    LAA + T +  +      ++ A
Sbjct: 389 VTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRA 448

Query: 398 GGLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 444
           G + +N    + A     PFGG + SG G   G  + D +   K+V++
Sbjct: 449 GTIWVN---CYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVT 493

Length = 501

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  137 bits (347), Expect = 1e-35
 Identities = 92/321 (28%), Positives = 164/321 (51%), Gaps = 24/321 (7%)

Query: 119 PFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
           P G V  I+P+N+P          AIAAG   VLKP+   P S+ +L +++ E  +   +
Sbjct: 123 PIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGA 182

Query: 172 IRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 230
             V+  +  +   L+ D++   + +TG+  V   + A A K    V+LELGG + V+ DS
Sbjct: 183 FSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNAAVIVDS 240

Query: 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK----NP 286
             +L  A +R+I G +    GQ+CIS   ++  +     + +  K+ L          +P
Sbjct: 241 DADLDFAAQRIIFGAFY-QAGQSCISVQRVLVHRS----VYDEFKSRLVARVKALKTGDP 295

Query: 287 LESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLI 344
            +   D+  +++ +   R+   +++   +G K++ GG+RD   L   PT+L DVP D  +
Sbjct: 296 KDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALL--EPTILEDVPPDMEV 353

Query: 345 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 404
             EE+FGP++ +   D  +++   +N     L A +FT + +   +  + +  GG+VIND
Sbjct: 354 NCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVIND 413

Query: 405 TAVHLAVHSLPFGGVQESGMG 425
                 V  +P+GGV++SG+G
Sbjct: 414 VPT-FRVDHMPYGGVKDSGIG 433

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  136 bits (346), Expect = 3e-35
 Identities = 95/338 (28%), Positives = 154/338 (45%), Gaps = 27/338 (7%)

Query: 110 PSSAEIVP--------EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPAS 155
            ++ E +         +P GVV  I+PWNYP  +       A+AAGN +VLKPSE+ P +
Sbjct: 121 KAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLT 180

Query: 156 SSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAAKHL 213
           +  LA+L  + +    + VV G  A    AL+   K   +  TG+    + V++AAA  +
Sbjct: 181 ALKLAELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSV 240

Query: 214 TPVLLELGGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 272
               LELGGK+PV VFD   +L      +    +  N GQ C +   I   +     L+ 
Sbjct: 241 KRTHLELGGKAPVIVFDDA-DLDAVVEGIRTFGY-YNAGQDCTAACRIYAQRGIYDDLVA 298

Query: 273 SLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGER-DKNKL 328
            L   +     G    E  +L  ++++ H  R++  ++  K  G  ++V GGE  D    
Sbjct: 299 KLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGY 358

Query: 329 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 388
              PTLL    +D  I+  E+FGP++ +   D  + +    N     LA+ ++T +    
Sbjct: 359 YYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRA 418

Query: 389 QQFVETVSAGGLVINDTAVHL-AVHSLPFGGVQESGMG 425
            +    +  G   +N    H   V  +P GG ++SG G
Sbjct: 419 HRVSARLQYGCTWVNT---HFMLVSEMPHGGQKQSGYG 453

Length = 475

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score =  135 bits (341), Expect = 9e-35
 Identities = 94/326 (28%), Positives = 162/326 (49%), Gaps = 19/326 (5%)

Query: 116 VPEPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MD 168
           + EP GVVL I+P+N+P          AIAA N +VLKPSE  P S+  LA L+ E  + 
Sbjct: 117 LREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLP 176

Query: 169 LSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSP 225
              + VV G   E    L      D + +TG   V + + A A  K     LLELGG  P
Sbjct: 177 PDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYKRQ---LLELGGNDP 233

Query: 226 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 285
           ++     +L+ A    + G +  N+GQ C +   I+  +  A + ++ L  +       +
Sbjct: 234 LIVMDDADLERAATLAVAGSYA-NSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGD 292

Query: 286 PL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSL 343
           P+  + D+  +++     ++   +++    G +++ G +R       APT+L  VP D+ 
Sbjct: 293 PMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALY--APTVLDHVPPDAE 350

Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
           +++EE FGP+ P++ V  ++++  I NS    L++ + TN+    ++ VE +  G + +N
Sbjct: 351 LVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVN 410

Query: 404 DTAVHLAVHSLPFGGVQESGMGAYHG 429
           +          PFGGV++SG+G   G
Sbjct: 411 EVP-GFRSELSPFGGVKDSGLGGKEG 435

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  134 bits (341), Expect = 1e-34
 Identities = 103/348 (29%), Positives = 159/348 (45%), Gaps = 25/348 (7%)

Query: 118 EPFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           +P GVV  I+P+N+P       F  AIA GN  VLKPSE  P ++  LA+L+ E   L  
Sbjct: 135 QPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQE-AGLPD 193

Query: 172 --IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
             + VV G     +ALLD    K + + G++ V   +   AA +   V    G K+  V 
Sbjct: 194 GVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVV 253

Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE 288
               +L+     ++   +G   GQ C++    +   D A + +  L    +        +
Sbjct: 254 MPDADLEQTANALVGAAFGAA-GQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDD 312

Query: 289 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLDVPR 340
              D+  +++     R+  L++     G K+V  G R       +N   + PT+L +V  
Sbjct: 313 PGADMGPVISPAAKERIEGLIESGVEEGAKLVLDG-RGVKVPGYENGNFVGPTILDNVTP 371

Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
           D  I  EEIFGP+L I+ VD ++++  IIN+      A +FT +    ++F   V AG +
Sbjct: 372 DMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMV 431

Query: 401 VIN-DTAVHLAVHSLPFGGVQESGMGAYH--GKFSFDVFSHKKAVLSR 445
            IN    V LA  S  FGG + S  G  H  GK     ++  K V SR
Sbjct: 432 GINVPIPVPLAFFS--FGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score =  133 bits (336), Expect = 5e-34
 Identities = 95/408 (23%), Positives = 175/408 (42%), Gaps = 23/408 (5%)

Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
           R   L     +L  R  +++  L  ++ K  +E+ I +VA     I+   +       P 
Sbjct: 79  RARLLLKAADLLRRRRRELIATLTYEVGKNWVEA-IDDVAEAIDFIRYYARAALRLRYPA 137

Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPA 154
                        E      G  ++ISPWN+P        V  +A GN ++ KP+E A  
Sbjct: 138 VEVVPYP--GEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVV 195

Query: 155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK 211
               + ++  E       ++ + G   E  A L   ++   I +TG+    + +  AAA+
Sbjct: 196 VGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR 255

Query: 212 HLT------PVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 265
                     + +E GGK+ ++ D   + ++    +++  +G   GQ C +   +I T+ 
Sbjct: 256 LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFG-FQGQKCSAASRLILTQG 314

Query: 266 YAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 324
               +LE L    E      P E+  DL  ++++   A++   ++  K  G++V GG+R 
Sbjct: 315 AYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRL 374

Query: 325 K-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLF 381
           +     +APT++ +VP  + I  EEIFGP+L ++    D   ++ ++ NS    L   ++
Sbjct: 375 EGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVY 434

Query: 382 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 429
           +  ++  ++       G L IN       V   PFGG + SG  A  G
Sbjct: 435 SRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score =  133 bits (336), Expect = 5e-34
 Identities = 97/348 (27%), Positives = 159/348 (45%), Gaps = 26/348 (7%)

Query: 117 PEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLS 170
            EP GVV  I PWN+P  +       A+AAGN +VLKP+E  PAS  +L +L+G+ +   
Sbjct: 134 HEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLLPPG 193

Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 227
            + VV G   E    L   ++  K+ +TG +   R++M  A++++ PV LELGGKSP + 
Sbjct: 194 VVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIF 253

Query: 228 FDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 282
           F   ++        A    +M  +  N G+ C  P   +  +    + +E     ++   
Sbjct: 254 FADVMDADDAFFDKALEGFVM--FALNQGEVCTCPSRALIQESIYDRFMERALERVKAIK 311

Query: 283 GKNPLESKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-----DKNKLRIAPTLL 335
             NPL+++  +    +     ++   +D  K  G +++ GGER             PT  
Sbjct: 312 QGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTF 371

Query: 336 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 395
                   I  EEIFGP+L + T    E++ +I N     L A ++T +     +    +
Sbjct: 372 KG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGI 430

Query: 396 SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
            AG +  N    HL      FGG ++SG+G  + K   D +   K +L
Sbjct: 431 QAGRVWTN--CYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLL 476

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score =  132 bits (335), Expect = 2e-33
 Identities = 91/331 (27%), Positives = 151/331 (45%), Gaps = 29/331 (8%)

Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLV---GEYMDL 169
           P GVV +ISPWNYP  +       A+ AGNA+VLKP    P ++    +L+   G   DL
Sbjct: 154 PKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDL 213

Query: 170 SSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
             +    G V  T AL+D   D + +TG++   R++   A + L    LELGGK+P++  
Sbjct: 214 WQVVTGPGPVVGT-ALVDNA-DYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVL 271

Query: 230 SGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENF-----Y 282
              +L  A    +     C  N GQ CIS + I   +    + + +    +        Y
Sbjct: 272 DDADLDKAAAGAVR---ACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGY 328

Query: 283 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--DKNKLRIAPTLLLDVP 339
             +     D+  +++      +S  +DD    G  ++ GG+   D   L   PT+L  V 
Sbjct: 329 DYSA----DMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVT 384

Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
            D  +  EE FGP++ +  V  ++++ +  N     L A ++T +    +     + AG 
Sbjct: 385 PDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGT 444

Query: 400 LVINDT-AVHLAVHSLPFGGVQESGMGAYHG 429
           + +N+  A        P GG+++SG+G  HG
Sbjct: 445 VNVNEGYAAAWGSVDAPMGGMKDSGLGRRHG 475

Length = 524

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score =  129 bits (325), Expect = 2e-32
 Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 18/328 (5%)

Query: 119 PFGVVLIISPWNYPF--FVG----AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
           P GV ++ISPWN+PF   VG     I  GN +VLKP+E AP  ++   +++ E  +    
Sbjct: 167 PTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGV 226

Query: 172 IRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAAK------HLTPVLLELGGK 223
           ++ V G+ +E    L+D  K   I +TG+  V   +   AAK      HL  V+ E+GGK
Sbjct: 227 VQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGK 286

Query: 224 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-Y 282
             V+ D   ++++A +      +G   GQ C +    +  +    +++E      E+   
Sbjct: 287 DTVIVDEDADIELAAQSAFTSAFGFA-GQKCSAGSRAVVHEKVYDEVVERFVEITESLKV 345

Query: 283 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRD 341
           G        +  +++   F ++ + ++  K  G++V GG  D +K   I PT+  DV R 
Sbjct: 346 GPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKGYFIGPTIFADVDRK 405

Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
           + +  EEIFGP++  +     +++ +I N+    L   + +NN+    +       G L 
Sbjct: 406 ARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLY 465

Query: 402 INDTAVHLAVHSLPFGGVQESGMGAYHG 429
            N       V   PFGG + SG  +  G
Sbjct: 466 FNRNITGAIVGYQPFGGFKMSGTDSKAG 493

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score =  128 bits (323), Expect = 4e-32
 Identities = 104/327 (31%), Positives = 166/327 (50%), Gaps = 18/327 (5%)

Query: 117 PEPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLS 170
            +P GVV  I PWN+P  +       A+A GN +VLKP+E  P ++ L A++  E   L 
Sbjct: 145 WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAE-AGLP 203

Query: 171 S--IRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-V 226
              + +V G  +  SAL +    DK+ +TG++ V R +  A A     + LELGGKSP +
Sbjct: 204 PGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFI 263

Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 286
           VFD   +L  A   ++   W  N GQ C +   ++  +  A +L+  LK  + +    +P
Sbjct: 264 VFDDA-DLDSAVEGIVDAIW-FNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDP 321

Query: 287 LE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVH--GGERDKNKLRIAPTLLLDVPRDSL 343
           L+ + D+  IV+     R+ +L+++ +  G  V   G +         PTL  +VP  S 
Sbjct: 322 LDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASR 381

Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
           I  EEIFGP+L +LT    +++  + N+    LAA +++ N  L  +   ++ AG + IN
Sbjct: 382 IAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWIN 441

Query: 404 DTAVHLAVHSLPFGGVQESGMGAYHGK 430
              +  A  +  FGG +ESG G   GK
Sbjct: 442 GHNLFDA--AAGFGGYRESGFGREGGK 466

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 4e-32
 Identities = 91/324 (28%), Positives = 153/324 (47%), Gaps = 21/324 (6%)

Query: 118 EPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
            P GV ++ISPWN+PF       + AI AGN ++LKP+   P  ++   +++ E  +   
Sbjct: 170 IPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAG 229

Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------HLTPVLLELGG 222
            +  V G+ +E    L    K   I +TG+  V   +   AAK       L  V+ E+GG
Sbjct: 230 VVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGG 289

Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 282
           K  +V D   +L +A   ++   +G + GQ C +    I  +D   ++LE +    +   
Sbjct: 290 KDAIVVDEDADLDLAAESIVASAFGFS-GQKCSACSRAIVHEDVYDEVLEKVVELTKELT 348

Query: 283 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRD 341
             NP ++  +  ++N   F ++   ++  K  G++V GGE D +K   I PT+  DV   
Sbjct: 349 VGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPK 408

Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
           + IM EEIFGP++  +     + + +I N+    L   + +NN++  ++       G L 
Sbjct: 409 ARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLY 468

Query: 402 IND--TAVHLAVHSLPFGGVQESG 423
            N   T   +  H  PFGG   SG
Sbjct: 469 FNRGCTGAIVGYH--PFGGFNMSG 490

Length = 514

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score =  127 bits (320), Expect = 9e-32
 Identities = 96/353 (27%), Positives = 163/353 (46%), Gaps = 28/353 (7%)

Query: 110 PSSAEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLV 163
           P+   +  E  GVV  I+PWN+P  +       A+AAGN +VLKP+   P  +++L +L+
Sbjct: 132 PTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWCAAVLGELI 191

Query: 164 GEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLE 219
            E+ D     + +V  +     ALL  D + D + +TG++   R VMA AA  L  V LE
Sbjct: 192 AEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKKVFLE 251

Query: 220 LGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPK-----LLESL 274
           LGGKS  +     +L  AC  M       + GQ C      ITT+   P+      + + 
Sbjct: 252 LGGKSAFIVLDDADLAAAC-SMAAFTVCMHAGQGC-----AITTRLVVPRARYDEAVAAA 305

Query: 275 KNELENFYGKNPLESKDL-SRIVNSNHFARLSKLLD-DDKVSGKIVHGGERDKNKLR--- 329
              + +    +P +   +   ++++    R+   LD      G+   GG R  ++ R   
Sbjct: 306 AATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDRGFF 365

Query: 330 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 389
           + PT++  +  ++ +  EEIFGP+L ++  D  +D+  I N     L+  +F  + +   
Sbjct: 366 VEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAA 425

Query: 390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
                V  G + +N    + A    PFGG ++SG+G   G   F+ +   K +
Sbjct: 426 AVAARVRTGTVNVNGGVWYSA--DAPFGGYKQSGIGREMGVAGFEEYLETKLI 476

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score =  124 bits (314), Expect = 6e-31
 Identities = 103/349 (29%), Positives = 164/349 (46%), Gaps = 34/349 (9%)

Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP GV   I  WNYP  +       A+AAGNA++ KPSEV P ++  LA++  E  +   
Sbjct: 141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDG 200

Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VV 227
              VV+G      A L +  D  K+ +TG     + VMAAAA  L  V +ELGGKSP +V
Sbjct: 201 VFNVVQGD-GRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIV 259

Query: 228 FDSGINLKVACRRMIMGKWGCN---NGQACISPDHIITTKDYAPKLLESLKNELENFYGK 284
           FD   +L  A    ++     N   +GQ C +   +   K         L   +E     
Sbjct: 260 FDDA-DLDRAADIAMLA----NFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIG 314

Query: 285 NPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPTLLLD 337
           +P+  + +   +V+  H  ++   ++  K  G +++ GGER           +APT+  D
Sbjct: 315 DPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTD 374

Query: 338 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
              D  I+ EEIFGP++ +LT D  ++     N     LAA +FT +     + +  + A
Sbjct: 375 CTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEA 434

Query: 398 GGLVIN---DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
           G   IN   ++        +P GG ++SG+G  +G  + + ++  K+V 
Sbjct: 435 GICWINTWGESPA-----EMPVGGYKQSGIGRENGIATLEHYTQIKSVQ 478

Length = 488

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score =  123 bits (311), Expect = 2e-30
 Identities = 106/350 (30%), Positives = 165/350 (47%), Gaps = 20/350 (5%)

Query: 110 PSSAEIVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLV 163
           P   + + EP GV   I PWN+P       VG A+A GN +VLK +E  P S+   AKL+
Sbjct: 186 PHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLL 245

Query: 164 GEY-MDLSSIRVVEGAVAETSALLDQKW--DKICYTGNSRVARIVMAAAAK-HLTPVLLE 219
            E  +    + VV G      A L      DK+ +TG++   +IV+  AAK +L PV LE
Sbjct: 246 HEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLE 305

Query: 220 LGGKSPVVF--DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK-N 276
           LGGKSP +   D+ ++  V      +     N GQ C +       +    + +E  K  
Sbjct: 306 LGGKSPFIVCEDADVDKAVELAHFAL---FFNQGQCCCAGSRTFVHERVYDEFVEKAKAR 362

Query: 277 ELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTL 334
            L+   G    +  +    ++S  F ++ + +     SG  +  GG+R  +K   I PT+
Sbjct: 363 ALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTV 422

Query: 335 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 394
             +V  D LI  +EIFGP+  IL    +++     N+    LAA +FT N          
Sbjct: 423 FSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRA 482

Query: 395 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS 444
           +  G + +N   V  A  ++PFGG + SG+G   G +S + +   KAV++
Sbjct: 483 LRVGTVWVNCFDVFDA--AIPFGGYKMSGIGREKGIYSLNNYLQVKAVVT 530

Length = 538

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  122 bits (308), Expect = 3e-30
 Identities = 96/342 (28%), Positives = 167/342 (48%), Gaps = 15/342 (4%)

Query: 113 AEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY 166
           A IV EP GV+  I PWN+P  +       A+AAGN+++LKPSE +P S+  LA L  E 
Sbjct: 151 AMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEA 210

Query: 167 -MDLSSIRVVEGAVAET-SAL-LDQKWDKICYTGNSRVARIVMA-AAAKHLTPVLLELGG 222
            +    + VV G   E   AL      D I +TG++R  + ++  A   ++  V LE GG
Sbjct: 211 GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGG 270

Query: 223 KSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 281
           KS  +VF    +L+ A      G +  N GQ CI+   ++  +  A + L  LK + +N+
Sbjct: 271 KSANIVFADCPDLQQAASATAAGIF-YNQGQVCIAGTRLLLEESIADEFLALLKQQAQNW 329

Query: 282 YGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPR 340
              +PL+ +  +  +++  H   +   + + +  G+++  G        I PT+ +DV  
Sbjct: 330 QPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDP 389

Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
           ++ +  EEIFGP+L +      E +  + N     L A ++T +     +    + AG +
Sbjct: 390 NASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSV 449

Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            +N+   +    ++PFGG ++SG G      + + F+  K +
Sbjct: 450 FVNN--YNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489

Length = 494

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score =  122 bits (307), Expect = 4e-30
 Identities = 98/348 (28%), Positives = 162/348 (46%), Gaps = 34/348 (9%)

Query: 118 EPFGVVLIISPWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
           EP GV  I+ PWNYP  + A      +AAGN +VLKP++V P ++   A+L V       
Sbjct: 146 EPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKG 205

Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 227
            I ++ G+ +     L    D  K+ +TG++ + + +M + A  +L  V LELGGKSP++
Sbjct: 206 VINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLI 265

Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 287
             +  ++  A  RM M     N G+ CI+   +   +    + +  +  E++     +PL
Sbjct: 266 IFADCDMDKAV-RMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPL 324

Query: 288 E-SKDLSRIVNSNHFARLSKLLDDDKVS----GKIVHGGER-DKNKLRIAPTLLLDVPRD 341
           + S D       NH A L KL++  +        +V+GG++ D+      PT+  DV   
Sbjct: 325 DRSTDHG---PQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDH 381

Query: 342 SLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
             I  EE FGP++ I   D   ++      N     LA+ +FT +        + + AG 
Sbjct: 382 MFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGT 441

Query: 400 LVIN-----DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           + +N     D A        PFGG ++SG G   G+ + + +   K V
Sbjct: 442 VFVNTYNKTDVAA-------PFGGFKQSGFGKDLGEEALNEYLKTKTV 482

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score =  119 bits (301), Expect = 2e-29
 Identities = 102/425 (24%), Positives = 187/425 (44%), Gaps = 38/425 (8%)

Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK----SALKELKHW 96
           R   L  L          +   L  +  K   E+  +E++   + ++     A  E    
Sbjct: 44  RARVLLELADAFEANAERLARLLALENGKILGEAR-FEISGAISELRYYAGLARTEAGRM 102

Query: 97  MTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSE 150
           + PE    S+        ++ EP GV  II PWN P          A+AAG  +V+KP+ 
Sbjct: 103 IEPEPGSFSL--------VLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAG 154

Query: 151 VAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVM 206
                ++ + +++ E   L +  + +   + +E +A L      D I +TG++   R +M
Sbjct: 155 QTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIM 214

Query: 207 AAAAKHLTPVLLELGGKSP-VVF-DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 264
           AAAA  L  + LELGGK+P +VF D+ ++  +     +        GQ C++   ++  +
Sbjct: 215 AAAAPTLKRLGLELGGKTPCIVFDDADLDAALP---KLERALTIFAGQFCMAGSRVLVQR 271

Query: 265 DYAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 322
             A ++ + L   L     G     + D+  +++  +  R+ ++++    +G ++V  G 
Sbjct: 272 SIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGG 331

Query: 323 RDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 378
                L     + PTLL     D+ I+ EEIFGP+L + T D   ++  + N     LAA
Sbjct: 332 PVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAA 391

Query: 379 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFS 437
            ++T +     +    + AG + IND      + +    GG ++SG+G  HG  + + F 
Sbjct: 392 SVWTRDLARAMRVARAIRAGTVWIND---WNKLFAEAEEGGYRQSGLGRLHGVAALEDFI 448

Query: 438 HKKAV 442
             K +
Sbjct: 449 EYKHI 453

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score =  117 bits (295), Expect = 2e-28
 Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 31/350 (8%)

Query: 116 VPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 169
           V +P GVV +ISPWN P       VG A+A GN +V+KPSE  P +++LL    GE M+ 
Sbjct: 136 VRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLL----GEVMNA 191

Query: 170 SSI-----RVVEG-AVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELG 221
             +      VV G         L +    D I +TG +R    +M AAA  + PV  ELG
Sbjct: 192 VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELG 251

Query: 222 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 281
           GK+  +  +  +   A   ++   +  N GQ C+  + +   +    + + +LK   E+ 
Sbjct: 252 GKNAAIVFADCDFDAAVAGILRSAF-LNTGQVCLGTERVYVERPIFDRFVAALKARAESL 310

Query: 282 -YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH--------GGERDKNKLRIAP 332
             G     + ++  ++++ H  ++          G  V         G         + P
Sbjct: 311 KIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALA-GGAWVQP 369

Query: 333 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 392
           T+   +P  + +++EEIFGP   I   D  E+   + N     LAA ++T +     +  
Sbjct: 370 TIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVA 429

Query: 393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
             +  G + +N  +  L     PFGG + SG+G   G  S + ++    V
Sbjct: 430 RQMEVGIVWVN--SWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNV 477

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score =  115 bits (291), Expect = 4e-28
 Identities = 95/339 (28%), Positives = 155/339 (45%), Gaps = 21/339 (6%)

Query: 111 SSAEIVPEPFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLV- 163
           S A +  +P GVVL + PWN+P      F   A+ AGN  +LK +   P ++  LA L  
Sbjct: 115 SRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFR 174

Query: 164 -GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 222
              + D     ++ G+ A  + L D +      TG+    R V A A   +   +LELGG
Sbjct: 175 RAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGG 234

Query: 223 KSPVVFDSGINLKVACRRMIMGKWGC-NNGQACISPDHIITTKDYAPKLLESLKNELENF 281
             P +     +L  A    +  +    NNGQ+CI+    I   D      E     +   
Sbjct: 235 SDPFIVMPSADLDRAAETAVTAR--VQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAAL 292

Query: 282 YGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDV 338
              +P     D+  +        + K +DD   +G  I+ GG+R D       PT++ D+
Sbjct: 293 RVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDI 352

Query: 339 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 398
             D  + +EE+FGP+  +  V  I+++ +I N+ T  L +  +T ++  +++F++ + AG
Sbjct: 353 TPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAG 412

Query: 399 GLVIND-TAVHLAVHSLPFGGVQESGMG---AYHGKFSF 433
            + IN  T  +     LPFGGV+ SG G   + HG   F
Sbjct: 413 QVFINGMTVSYPE---LPFGGVKRSGYGRELSAHGIREF 448

Length = 457

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score =  115 bits (290), Expect = 6e-28
 Identities = 93/322 (28%), Positives = 148/322 (45%), Gaps = 19/322 (5%)

Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           +P GVV  I+PWNYP  +       A+AAGN +VLKPSE+ P ++  LA+L  +      
Sbjct: 136 DPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGV 195

Query: 172 IRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-VF 228
           + ++ G        L   +K   +  TG+      +++  A  +    +ELGGK+PV VF
Sbjct: 196 VNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVF 255

Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL- 287
           D      V       G +  N GQ C +   I   +     L+E L   +       P  
Sbjct: 256 DDADIDAVVEGVRTFGFY--NAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDD 313

Query: 288 ESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAPTLLLDVPRDSLI 344
           ES +L  + +  H  R+ K +++ K  G  K++ GGE+ K      APTLL    +D  I
Sbjct: 314 ESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAI 373

Query: 345 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 404
           + +E+FGP++ I + D  E   +  N     LA+ ++T +     +    +  G   +N 
Sbjct: 374 VQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVN- 432

Query: 405 TAVH-LAVHSLPFGGVQESGMG 425
              H + V  +P GG + SG G
Sbjct: 433 --THFMLVSEMPHGGQKLSGYG 452

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score =  115 bits (288), Expect = 1e-27
 Identities = 91/333 (27%), Positives = 154/333 (46%), Gaps = 17/333 (5%)

Query: 115 IVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
           ++ +P GV   I+PWN+P  +       A+AAG  +VLKP+   P S+  LA+L      
Sbjct: 142 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGI 201

Query: 169 LSSI-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 225
            + +  VV G+       L       K+ +TG++ + R +M   AK +  V LELGG +P
Sbjct: 202 PAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 261

Query: 226 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 284
            +VFD   +L  A    +  K+  N GQ C+  + +        +  E L+  +   +  
Sbjct: 262 FIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIG 319

Query: 285 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK-NKLRIAPTLLLDVPRD 341
           + LE    +  +++    A++ + + D    G ++V GG+  +       PT+L+DVP +
Sbjct: 320 DGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPAN 379

Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
           + +  EE FGPL P+       D     N     LAAY +  +     +  E +  G + 
Sbjct: 380 AKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVG 439

Query: 402 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFD 434
           IN   +   V   PFGG++ SG+G    K+  +
Sbjct: 440 INTGIISNEV--APFGGIKASGLGREGSKYGIE 470

Length = 482

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  111 bits (279), Expect = 2e-26
 Identities = 103/402 (25%), Positives = 186/402 (46%), Gaps = 28/402 (6%)

Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
           R++ L+ L  ++ ER  ++   + ++  KP L  +  EV      ++ A  EL   +   
Sbjct: 46  RIAILERLADLMEERADELALLIAREGGKP-LVDAKVEVTRAIDGVELAADELGQ-LGGR 103

Query: 101 KAKTSITTFPSS----AEIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSE 150
           +    +T  P+S    A    EP GVV+ IS +N+P          AIAAG  +++KP+ 
Sbjct: 104 EIPMGLT--PASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161

Query: 151 VAPASSSLLAKLVGEY---MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMA 207
             P S      L+ E             E AVAE     D +     + G++RV  ++ +
Sbjct: 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVT-DPRVAFFSFIGSARVGWMLRS 220

Query: 208 AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 267
             A   T   LE GG +PV+ D   +L      ++ G +  + GQ C+S   +    + A
Sbjct: 221 KLAPG-TRCALEHGGAAPVIVDRSADLDAMIPPLVKGGF-YHAGQVCVSVQRVFVPAEIA 278

Query: 268 PKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK 325
               + L    E     +P     ++  ++      R+ + +++   +G +++ GG+R  
Sbjct: 279 DDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLS 338

Query: 326 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 385
           +    APT+LLD PRD+ + ++EIFGP++ + + D ++++    NS      A +FT + 
Sbjct: 339 DTT-YAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDL 397

Query: 386 KLKQQFVETVSAGGLVINDTAVHLA--VHSLPFGGVQESGMG 425
            +  + V  + A  +++ND   H A  V  +PF G ++SG G
Sbjct: 398 DVALKAVRRLDATAVMVND---HTAFRVDWMPFAGRRQSGYG 436

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score =  105 bits (263), Expect = 2e-24
 Identities = 84/324 (25%), Positives = 152/324 (46%), Gaps = 18/324 (5%)

Query: 118 EPF-GVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDL 169
           EP  GV+  I+P+N+P          AIA  N +V+KPSE  P S+  LA ++ E  +  
Sbjct: 137 EPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPP 196

Query: 170 SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 227
             ++VV G   E +  L  +   D + +TG   + + +  AA       +LELGG  P++
Sbjct: 197 QMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI--AARAGYRRQVLELGGNDPLI 254

Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 287
                +L  A    + G +  N+GQ C +   ++  +  A +  E L  +   +   +P+
Sbjct: 255 VMEDADLDRAADLAVKGSYK-NSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPM 313

Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIM 345
             S D+  +++          +++    G +++ G  RD      APT+L  V     ++
Sbjct: 314 DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALY--APTVLDRVDPSMTLV 371

Query: 346 SEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 405
            EE FGP+ P++    I+D+  I NS    L++ + TN      +F+  +  G + + + 
Sbjct: 372 REETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEV 431

Query: 406 AVHLAVHSLPFGGVQESGMGAYHG 429
             +  +   PFGG+++SG+G   G
Sbjct: 432 PGY-RLELTPFGGIKDSGLGYKEG 454

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score =  102 bits (256), Expect = 1e-23
 Identities = 84/329 (25%), Positives = 144/329 (43%), Gaps = 38/329 (11%)

Query: 119 PFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 171
           P GV+ +  P+N+P        V A+ AGN +V KPSE+ PA + L+ +L  E   L   
Sbjct: 97  PHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEE-AGLPPG 155

Query: 172 -IRVVEGAVAETSALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVF 228
            + +V+G      AL   +  D + +TG++    ++    A     +L LE+GG +P+V 
Sbjct: 156 VLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVV 215

Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA-----PKLLESLKN------- 276
               ++  A   ++   +    GQ C     +I            +L+E+ K        
Sbjct: 216 WDVADIDAAAYLIVQSAF-LTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPD 274

Query: 277 ELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGER-DKNKLRIAPTL 334
               F G  PL        + +   AR      D     G+ +   ER       ++P +
Sbjct: 275 AEPPFMG--PL--------IIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGI 324

Query: 335 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 394
           + DV   + +  EEIFGPLL +   D  +++  + N+    L+A L ++++ L ++F+  
Sbjct: 325 I-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLAR 383

Query: 395 VSAGGLVINDTAVHLAVHSLPFGGVQESG 423
           + AG +  N      A  + PFGGV  SG
Sbjct: 384 IRAGIVNWNRPTTG-ASSTAPFGGVGLSG 411

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score =  103 bits (257), Expect = 1e-23
 Identities = 107/449 (23%), Positives = 182/449 (40%), Gaps = 42/449 (9%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK--PELESSIY--- 77
           V   R TF +    S   R S L     +L E   +I + +  +  K   +    +    
Sbjct: 44  VASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGL 103

Query: 78  EVALLKTSIKSALK-ELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYP---- 132
           EV      + S LK E    +       SI           +P GV   I+P+N+P    
Sbjct: 104 EVVEHACGVNSLLKGETSTQVATRVDVYSIR----------QPLGVCAGITPFNFPAMIP 153

Query: 133 --FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK 189
              F  AIA GN  VLKPSE  P+++  LA+L  E       + VV G       LL+  
Sbjct: 154 LWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHP 213

Query: 190 WDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC 248
             K + + G++ + R +    + H   V    G K+ +V     +   A   ++   +G 
Sbjct: 214 DVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGA 273

Query: 249 NNGQACISPDHII---TTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 305
             GQ C++    +      ++ P++ E  + ++    G +P    ++  ++      R++
Sbjct: 274 A-GQRCMAISAAVLVGAADEWVPEIRERAE-KIRIGPGDDP--GAEMGPLITPQAKDRVA 329

Query: 306 KLLDDDKVSG-KIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTV 359
            L+      G +++  G   K         + PTLL  VP       EEIFGP+L +L  
Sbjct: 330 SLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEA 389

Query: 360 DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN-DTAVHLAVHSLPFGG 418
           D +E++  +IN+        +FT +    ++F   +  G + +N    V L   S  F G
Sbjct: 390 DTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFS--FTG 447

Query: 419 VQESGMGAYH--GKFSFDVFSHKKAVLSR 445
            ++S  G +H  GK     ++  K V +R
Sbjct: 448 WKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score = 97.6 bits (243), Expect = 7e-22
 Identities = 109/444 (24%), Positives = 187/444 (42%), Gaps = 59/444 (13%)

Query: 30  FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89
           F   +  +  +R  +L+ + K L  R  ++   + +++ KP  ++   EVA      KSA
Sbjct: 42  FRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQARA-EVA------KSA 94

Query: 90  LKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFF------VGAI 138
              L  W   E     +   P+  E     I   P G +L I PWN+P +      V  +
Sbjct: 95  --NLCDWYA-EHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIL 151

Query: 139 AAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETS-----ALLDQKWDKI 193
            AGN  +LK +      + L+A++   + D    + V G +   +      + D +   +
Sbjct: 152 LAGNGYLLKHAPNVMGCAQLIAQV---FKDAGIPQGVYGWLNADNDGVSQMINDSRIAAV 208

Query: 194 CYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA 253
             TG+ R    + A A   L   +LELGG  P +  +  +L++A +  + G++  N GQ 
Sbjct: 209 TVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ-NTGQV 267

Query: 254 CISPDHIITTKDYAPKLLE-------SLK----NELENFYGKNPLESKDLSRIVNSNHFA 302
           C +    I  +  A    E       +LK     + EN  G  P+   DL   ++    A
Sbjct: 268 CAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALG--PMARFDLRDELHHQVEA 325

Query: 303 RLSK----LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 358
            L++    LL  +K++G   +           APT+L +V  +     EE+FGP+  I  
Sbjct: 326 TLAEGARLLLGGEKIAGAGNY----------YAPTVLANVTPEMTAFREELFGPVAAITV 375

Query: 359 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 418
               E + ++ N     L+A +FT ++   +Q    +  GG+ IN      A   + FGG
Sbjct: 376 AKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDA--RVAFGG 433

Query: 419 VQESGMGAYHGKFSFDVFSHKKAV 442
           V++SG G     F    F + + V
Sbjct: 434 VKKSGFGRELSHFGLHEFCNIQTV 457

Length = 462

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 90.9 bits (226), Expect = 3e-19
 Identities = 85/327 (25%), Positives = 155/327 (47%), Gaps = 23/327 (7%)

Query: 118 EPFGVVLIISPWNYPF--FVG----AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
            P G V+ ISPWN+P   F G    A+AAGN+++ KP+E  P  ++   +L+ E  +   
Sbjct: 235 RPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPG 294

Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSP 225
            ++++ G      A L  D +   + +TG++ VAR++    AK      P++ E GG++ 
Sbjct: 295 VLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNA 354

Query: 226 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 285
           ++ DS    +     ++   +  + GQ C +   +   +D A ++L  LK  +      N
Sbjct: 355 MIVDSSALAEQVVADVLASAFD-SAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGN 413

Query: 286 P-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---IAPTLL-LDVPR 340
           P   + D+  ++++   A + K +   +  G++VH      +  +   +APTL+ L+   
Sbjct: 414 PDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLD 473

Query: 341 DSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 398
           +   +  E+FGP+L ++    D++++  D IN+    L   + T   +      E   AG
Sbjct: 474 E---LQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAG 530

Query: 399 GLVINDTAVHLAVHSLPFGGVQESGMG 425
            L +N   V   V   PFGG   SG G
Sbjct: 531 NLYVNRNIVGAVVGVQPFGGEGLSGTG 557

Length = 769

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 90.0 bits (223), Expect = 3e-19
 Identities = 94/410 (22%), Positives = 180/410 (43%), Gaps = 41/410 (10%)

Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
           R ++L  L  +L    P+++    ++  K  + ++I EV       + A+   +++    
Sbjct: 98  RAAKLDRLADLLELHMPELMALCVREAGK-TIHNAIAEV-------REAVDFCRYY---- 145

Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF--FVG----AIAAGNALVLKPSEVAPA 154
            AK          E   E  GV + ISPWN+P   F G    A+AAGN ++ KP+E    
Sbjct: 146 -AKQVRDVLG---EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSL 201

Query: 155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK 211
            +    +L+ E      +I+++ G  A+  A L  D +   + +TG++ VA+++    A+
Sbjct: 202 IAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQ 261

Query: 212 HL---TPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 268
                 P++ E GG++ ++ DS    +   R ++   +  + GQ C +   +   +D A 
Sbjct: 262 REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFD-SAGQRCSALRVLCVQEDVAD 320

Query: 269 KLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK 327
           ++L  ++  ++      P L + D+  ++++     L   ++    + K +     D ++
Sbjct: 321 RVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSR 380

Query: 328 LR-----IAPTLL-LDVPRDSLIMSEEIFGPLLPIL--TVDKIEDSFDIINSGTKPLAAY 379
                  +APTL  LD   D   +SEE+FGP+L ++     +++   D IN     L   
Sbjct: 381 ACQHGTFVAPTLFELD---DIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMG 437

Query: 380 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 429
           + +  +   +   +    G   +N   V   V   PFGG   SG G   G
Sbjct: 438 VHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAG 487

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score = 89.6 bits (223), Expect = 4e-19
 Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 29/287 (10%)

Query: 119 PFGVVLIISPWNYPFFV----GAIAA--GNALVLKPSEVAPASSSLLAKLVGEYM----- 167
           P GVV +I+ +N+P  V     AIA   GN +V KPS   P ++  + K+V   +     
Sbjct: 132 PLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGL 191

Query: 168 --DLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK-S 224
              ++S+      V E     D +   + +TG++ V R V  A A      LLELGG  +
Sbjct: 192 PGAIASLVCGGADVGEALVK-DPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNA 250

Query: 225 PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 284
            +V +   +L +A R ++    G   GQ C +   +I  +    ++LE LK      Y +
Sbjct: 251 IIVMEDA-DLDLAVRAVLFAAVG-TAGQRCTTTRRLIVHESIYDEVLERLKK----AYKQ 304

Query: 285 ----NPLESKDL-SRIVNSNHFARLSKLLDDDKVS-GKIVHGGER-DKNKLRIAPTLLLD 337
               +PL+   L   +            +++ K   G ++ GG+  D     + PT++ +
Sbjct: 305 VRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIV-E 363

Query: 338 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 384
              D+ I+ EE F P+L +L  D +E++    N   + L++ +FT +
Sbjct: 364 GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTD 410

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 87.3 bits (217), Expect = 3e-18
 Identities = 78/327 (23%), Positives = 149/327 (45%), Gaps = 23/327 (7%)

Query: 118 EPFGVVLIISPWNYPF--FVG----AIAAGNALVLKPSEVAPASSSLLAKL---VGEYMD 168
              GV + ISPWN+P   F G    A+AAGN ++ KP+E  P  ++   +L    G   D
Sbjct: 166 HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRD 225

Query: 169 LSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARI---VMAAAAKHLTPVLLELGGK 223
           +  +++V G   E    L    + D + +TG++  A++    +A     + P++ E GGK
Sbjct: 226 V--LQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGK 283

Query: 224 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 283
           + ++ DS    + A + ++   +G + GQ C +   +   ++ A + +E LK  + +   
Sbjct: 284 NAMIVDSTALPEQAVKDVVQSAFG-SAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKV 342

Query: 284 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRI-APTLLLDVPRD 341
            +P +   D+  +++      L    +  +    ++     D       AP ++  V   
Sbjct: 343 GDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVAPGIIEIVGIF 402

Query: 342 SLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
            L  + E+FGP+L ++      ++++ + IN+    L   + + +++  + + E V AG 
Sbjct: 403 DL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGN 460

Query: 400 LVINDTAVHLAVHSLPFGGVQESGMGA 426
           L IN       V   PFGG   SG G 
Sbjct: 461 LYINRNITGAIVGRQPFGGWGLSGTGP 487

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 86.3 bits (213), Expect = 6e-18
 Identities = 88/349 (25%), Positives = 151/349 (43%), Gaps = 30/349 (8%)

Query: 116 VPEPFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MD 168
           + EP GV   I P+N+P       F  A+  GN  +LKPSE  P +S +LA+L  E  + 
Sbjct: 246 IREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLP 305

Query: 169 LSSIRVVEGAVAETSALLD-QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 227
              + +V G     +A+ D +    + + G++     + A AA     +   +G K+  +
Sbjct: 306 DGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGL 365

Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHII---TTKDYAPKLLESLKNELENFYGK 284
                N+      ++   +G   GQ C++   ++     K +  KL+E  K  L+   G 
Sbjct: 366 VLPDANIDATLNALLAAGFGAA-GQRCMALSTVVFVGDAKSWEDKLVERAK-ALKVTCGS 423

Query: 285 NPLESKDLSRIVNSNHFARLSKLLDDDKVSGK---------IVHGGERDKNKLRIAPTLL 335
            P    DL  +++     R+ +L+      G          +V G E+      I PT+L
Sbjct: 424 EP--DADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGN---FIGPTIL 478

Query: 336 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 395
             V  D     EEIFGP+L  +  +  +++  IIN       A +FT++    ++F   +
Sbjct: 479 SGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDI 538

Query: 396 SAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAV 442
            AG + IN   + + +    F G + S  G   ++GK   D F+  K V
Sbjct: 539 EAGQIGIN-VPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLV 586

Length = 604

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 82.1 bits (203), Expect = 1e-16
 Identities = 84/319 (26%), Positives = 139/319 (43%), Gaps = 19/319 (5%)

Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLA---KLVGEYMDL 169
           P GVVL I P+NYP  +       A+ AGNA+VLKP      ++  +     L G     
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAG--FPK 215

Query: 170 SSIRVVEGAVAETSALLDQKWDKIC--YTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 227
             I  V G  +E    L       C  +TG      I   A    + P+ +ELGGK   +
Sbjct: 216 GLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAG---MVPLQMELGGKDACI 272

Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL 287
                +L +A   +I G +   +GQ C +   ++  +  A  L+E +  ++       P 
Sbjct: 273 VLEDADLDLAAANIIKGGFS-YSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPE 331

Query: 288 ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 347
           +  D++ +V+ +    +  L+ D K  G       + +  L I P LL +V  D  I  E
Sbjct: 332 DDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNL-IWPLLLDNVRPDMRIAWE 390

Query: 348 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 407
           E FGP+LP++ ++ +E+     N+    L   +FT +        + +  G + IN    
Sbjct: 391 EPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPA 450

Query: 408 HLAVHSLPFGGVQESGMGA 426
               H  PF G+++SG+G+
Sbjct: 451 RGPDH-FPFQGLKDSGIGS 468

Length = 496

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score = 75.2 bits (185), Expect = 2e-14
 Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 27/328 (8%)

Query: 121 GVVLIISPWNYPFFVGAIAA-----GNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 174
           G V  ISP+N+    G +A      GN ++ KPS+ A  S+ L+ +++ E  +    I  
Sbjct: 171 GFVYAISPFNFTAIAGNLAGAPALMGNTVIWKPSDTAMLSNYLVMRILEEAGLPPGVINF 230

Query: 175 V--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLT-----PVLL-ELGGKSPV 226
           V  +G +   + L D     I +TG++   + +    A++L      P ++ E GGK   
Sbjct: 231 VPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHNFPRIVGETGGKDFH 290

Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-YGKN 285
           V     +++      I G +    GQ C +   +       P+    L  EL     G  
Sbjct: 291 VVHPSADVEHVVSGTIRGAFEYQ-GQKCSACSRLYVPHSLWPRFKGRLLAELSRVKVGDP 349

Query: 286 PLESKDLSRIVNSNHFARLSKLLDDDKVSG---KIVHGGERDKNK-LRIAPTLLL-DVPR 340
                 +  +++   FA++ K ++  K       I+ GG+ D +    + PT++    P+
Sbjct: 350 DDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDSVGYFVEPTVVESKDPQ 409

Query: 341 DSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV-- 395
           + L M EEIFGP+L +     DK ++  D+++S T   L   +F  ++    +  + +  
Sbjct: 410 EPL-MKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLTGAVFAKDRDAILEADKVLRF 468

Query: 396 SAGGLVINDTAVHLAVHSLPFGGVQESG 423
           +AG   IND      V   PFGG + SG
Sbjct: 469 AAGNFYINDKPTGAVVGQQPFGGARASG 496

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score = 71.8 bits (176), Expect = 2e-13
 Identities = 79/341 (23%), Positives = 158/341 (46%), Gaps = 26/341 (7%)

Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 172
           P G+V +I+ +N+P  V       A+  GN +V K +   P  +  + KLV E ++ +++
Sbjct: 154 PLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNL 213

Query: 173 ------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 226
                     GA    +   D +   + +TG+S+V  +V           LLEL G + +
Sbjct: 214 PGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAI 273

Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 286
           +     ++++A R ++    G   GQ C +   ++  +     +LE L    +     +P
Sbjct: 274 IVMDDADIQLAVRSVLFAAVG-TAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDP 332

Query: 287 LESKDLSRIVNSNH----FARLSKLLDDDKVSGKIVHGG---ERDKNKLRIAPTLLLDVP 339
           LE   L   +++      F +  +++      GKI+ GG   E + N   + PT++ ++ 
Sbjct: 333 LEKGTLLGPLHTPESKKNFEKGIEIIKSQ--GGKILTGGSAIESEGN--FVQPTIV-EIS 387

Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV-ETVSAG 398
            D+ ++ EE+FGP+L ++    +E++ +I NS  + L++ +FT N +   +++    S  
Sbjct: 388 PDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDC 447

Query: 399 GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 439
           G+V  +   + A     FGG + +G G   G  S+  +  +
Sbjct: 448 GIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRR 488

Length = 508

>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

 Score = 69.6 bits (170), Expect = 9e-13
 Identities = 69/331 (20%), Positives = 128/331 (38%), Gaps = 30/331 (9%)

Query: 119 PFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGE--YMDLS 170
           P+G VL+I  +N+P ++      GA+A GN +++KP         ++ +L+     +   
Sbjct: 100 PYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE 159

Query: 171 SIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
            + ++ G      ALL       + +TG+SRVA  +   A      + LEL G +  V  
Sbjct: 160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDA--KQARIYLELAGFNWKVLG 217

Query: 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNPLE 288
                        +      +GQ C +   +   ++++   L+E LK  L     +  LE
Sbjct: 218 PDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLA----RRKLE 273

Query: 289 SKDLSRIVNSNHFARLSKLLDDDKV----SGKIVHGGERDKNKLRIAPTLLLDVPRDS-- 342
              L  +      A ++ + +        SGK +              + L  VP D   
Sbjct: 274 DLLLGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALF-VPIDEIL 332

Query: 343 ---LIMSEEIFGP--LLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV-ETVS 396
               +++EEIFGP  ++     D++    +++      L A +++N+    Q+ +     
Sbjct: 333 KTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWV 392

Query: 397 AGGLV-INDTAVHLAVHSLPFGGVQESGMGA 426
           AG    I      +A +    GG      GA
Sbjct: 393 AGRTYAILRGRTGVAPNQNHGGGPAADPRGA 423

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 64.5 bits (158), Expect = 7e-11
 Identities = 83/332 (25%), Positives = 153/332 (46%), Gaps = 33/332 (9%)

Query: 118 EPFGVVLIISPWNYPF--FVG----AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           +P G V+ ISPWN+P   F G    A+ AGN ++ KP+E  P    L+A      +  + 
Sbjct: 675 KPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTP----LIAARAVRLLHEAG 730

Query: 172 I-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHL---TPVLLELG 221
           +     +++ G      A L  D +   + +TG++ VAR++    AK      P++ E G
Sbjct: 731 VPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETG 790

Query: 222 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII-TTKDYAPKLLESLKNELEN 280
           G++ ++ DS    +     +I   +  + GQ C S   ++   +D A ++L  LK  ++ 
Sbjct: 791 GQNAMIVDSSALPEQVVADVIASAFD-SAGQRC-SALRVLCLQEDVADRVLTMLKGAMDE 848

Query: 281 FYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR---IAPTLL- 335
               +P   S D+  ++++   A +   ++  + +G++VH         +   +APTL+ 
Sbjct: 849 LRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE 908

Query: 336 LDVPRDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 393
           +D   D   +  E+FGP+L ++    D+++   D IN+    L   L +   +       
Sbjct: 909 IDSISD---LEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTS 965

Query: 394 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 425
            + AG + +N   +   V   PFGG   SG G
Sbjct: 966 RIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTG 997

Length = 1208

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 57.7 bits (140), Expect = 7e-09
 Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 29/238 (12%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP---- 70
             +AA   V+  R  F +    S+  R + ++    +L E + ++ + + ++  KP    
Sbjct: 38  QVDAA---VRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEA 94

Query: 71  --ELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISP 128
             E+ + I ++A+   SI++      H  T EK          +A +   P GVV +  P
Sbjct: 95  ATEVTAMINKIAI---SIQA-----YHERTGEKRSE---MADGAAVLRHRPHGVVAVFGP 143

Query: 129 WNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAE 181
           +N+P        V A+ AGN +V KPSE+ P  + L  KL  +  +    + +V+G    
Sbjct: 144 YNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRET 203

Query: 182 TSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFDSGINLKVA 237
             AL      D + +TG++    ++    A     +L LE+GG +P+V D   ++  A
Sbjct: 204 GKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAA 261

Length = 487

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score = 57.6 bits (140), Expect = 8e-09
 Identities = 76/331 (22%), Positives = 147/331 (44%), Gaps = 34/331 (10%)

Query: 121 GVVLIISPWNYPFFVGAIAA---------GNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           G V  +SP+N+     AI           GN ++ KPS+ A  S+ L+ K++ E  +   
Sbjct: 172 GFVYAVSPFNFT----AIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKILEEAGLPPG 227

Query: 171 SIRVV--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLT-----PVLL-ELGG 222
            I  V  +G V   + L       + +TG++   + +     ++L      P ++ E GG
Sbjct: 228 VINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGG 287

Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 282
           K+  +     ++       + G +    GQ C +       +   P++ E L  EL+   
Sbjct: 288 KNFHLVHPSADVDSLVTATVRGAFE-YQGQKCSAASRAYVPESLWPEVKERLLEELKEIK 346

Query: 283 GKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAPTLLL-D 337
             +P + S  +  +++   F R+   +D  K     +I+ GG+ D +    + PT++   
Sbjct: 347 MGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETT 406

Query: 338 VPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVET 394
            P+   +M+EEIFGP+L +        E++ +++++ +   L   +F  ++K  ++  + 
Sbjct: 407 DPKHK-LMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDA 465

Query: 395 V--SAGGLVINDTAVHLAVHSLPFGGVQESG 423
           +  +AG   IND      V   PFGG + SG
Sbjct: 466 LRNAAGNFYINDKPTGAVVGQQPFGGARASG 496

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

 Score = 55.7 bits (134), Expect = 3e-08
 Identities = 67/310 (21%), Positives = 101/310 (32%), Gaps = 65/310 (20%)

Query: 114 EIVPEPFGVVLIISPWNYPFFV-----GAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
            +   P GV + I P   P          IA  N  + +P   AP ++  LA L      
Sbjct: 95  YVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADA 154

Query: 169 LSSIRVVEGAVAETSALLDQ------KWDKICYTGNSRVARIVMAAAAKH--LTPVLLEL 220
               +++   V   S  L +      K D I  TG          AA KH    PV+   
Sbjct: 155 AHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVD----AAVKHSPHIPVIGFG 210

Query: 221 GGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN 280
            G SPVV D   + + A   +   K    +  AC S  ++    D    L E  K +L  
Sbjct: 211 AGNSPVVVDETADEERASGSVHDSK--FFDQNACASEQNLYVVDDVLDPLYEEFKLKLVV 268

Query: 281 FYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPR 340
              K P E+K LS+    +          DD+                            
Sbjct: 269 EGLKVPQETKPLSKETTPSF---------DDEAL-------------------------- 293

Query: 341 DSLIMSEEIFGPLLPILTV----DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 396
                  E   PL     V      +E+++ II SG  P    ++T+       FV+ + 
Sbjct: 294 -------ESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYID 346

Query: 397 AGGLVINDTA 406
                 N+++
Sbjct: 347 TASFYPNESS 356

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 55.8 bits (135), Expect = 4e-08
 Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 27/133 (20%)

Query: 119 PFGVVLIISPWNYPF--FVG----AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 172
           P G V+ ISPWN+P   F G    A+AAGN+++ KP+E  P  ++   ++      L   
Sbjct: 768 PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRI------LLEA 821

Query: 173 RVVEGAV------AET-SALL--DQKWDKICYTGNSRVARIVMAAAAKHL------TPVL 217
            V  G V       ET  A L  D +   + +TG++ VAR++    A  L       P++
Sbjct: 822 GVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLI 881

Query: 218 LELGGKSPVVFDS 230
            E GG++ ++ DS
Sbjct: 882 AETGGQNAMIVDS 894

Length = 1318

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 53.6 bits (129), Expect = 1e-07
 Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 28/219 (12%)

Query: 27  RGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVA 80
           R  F +    S   R++ ++    +L ER+  +   + ++  KP      E+ S I +VA
Sbjct: 45  RAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVA 104

Query: 81  LLKTSIKSALKELKHWMTPEKAKTSITTFP-SSAEIVPEPFGVVLIISPWNYP------F 133
           +   SIK+           E+   S    P   A +   P GVV +  P+N+P       
Sbjct: 105 I---SIKA---------YHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGH 152

Query: 134 FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WD 191
            V A+ AGN +V KPSE+ P  +    KL  +  +    + +V+GA     AL      D
Sbjct: 153 IVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDID 212

Query: 192 KICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFD 229
            + +TG+S    ++    A     +L LE+GG +P++ D
Sbjct: 213 GLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVD 251

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN

 Score = 48.3 bits (115), Expect = 7e-06
 Identities = 58/289 (20%), Positives = 113/289 (39%), Gaps = 18/289 (6%)

Query: 121 GVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL--SSI 172
           GV + I+ +N+P       F  A  AG   + KP+      +  L + + E   L   S+
Sbjct: 146 GVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSL 205

Query: 173 RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMA--AAAKHLTPVLLELGGKSPVVFDS 230
           +++ G+  +    LD + D + +TG++  A  + A     +       E    +  +   
Sbjct: 206 QLICGSAGDLLDHLDHR-DVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGE 264

Query: 231 GINLKV----ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 286
                        + I+ +     GQ C +   +I  K     +L++L+  L      +P
Sbjct: 265 DATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDP 324

Query: 287 L-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLL-DVPRDSL 343
             E  D+  +V+    A +   +     +G ++  GG    +     PTLLL + P    
Sbjct: 325 REEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGA 384

Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 392
           + + E FGP+          ++  +   G   L A L T++ +  +QF+
Sbjct: 385 VHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFI 433

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663

>gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 53/280 (18%), Positives = 104/280 (37%), Gaps = 49/280 (17%)

Query: 115 IVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
           I+ EP GVV  I+P   P        + ++   N+++  P   A   +   A L+ +   
Sbjct: 91  IIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAV 150

Query: 169 LSS-----IRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELG 221
            +      I  ++    E +  L +      +  TG   V +    AA     P +    
Sbjct: 151 AAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVK----AAYSSGKPAIGVGA 206

Query: 222 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 281
           G +PVV D   ++K A + ++  K   +NG  C S   +I       +++   + +    
Sbjct: 207 GNTPVVIDETADIKRAVQSIVKSK-TFDNGVICASEQSVIVVDSVYDEVMRLFEGQ---- 261

Query: 282 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD 341
            G   L +++L ++           +L +  V+  IV      ++  +IA    L VP++
Sbjct: 262 -GAYKLTAEELQQVQPV--------ILKNGDVNRDIV-----GQDAYKIAAAAGLKVPQE 307

Query: 342 SLIM-------------SEEIFGPLLPILTVDKIEDSFDI 368
           + I+             + E   P+L +       D+   
Sbjct: 308 TRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAK 347

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 46.7 bits (112), Expect = 2e-05
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 20/126 (15%)

Query: 121 GVVLIISPWNYPF--FVG----AIAAGNALVLKPSEVAPASSSLLAKLVGEYM-----DL 169
           GV + ISPWN+P   F+G    A+AAGN ++ KP+E     + L+A    + +       
Sbjct: 686 GVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAE----QTPLIAAEAVKLLHEAGIPK 741

Query: 170 SSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLL--ELGGKS 224
             ++++ G  A   A L  D +   + +TG++  ARI+    AA+    V L  E GG++
Sbjct: 742 DVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQN 801

Query: 225 PVVFDS 230
            ++ DS
Sbjct: 802 AMIVDS 807

Length = 1038

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 45.9 bits (109), Expect = 3e-05
 Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 3/90 (3%)

Query: 335 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 394
           ++DV   + +  EE FGPLL ++  D  +++  I N+    L+A L +++++L  +F+  
Sbjct: 360 IIDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLE 419

Query: 395 VSAGGLVIN-DTAVHLAVHSLPFGGVQESG 423
           + AG  ++N +  +  A  + PFGG+  SG
Sbjct: 420 IRAG--IVNWNKPLTGASSAAPFGGIGASG 447

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 44.2 bits (105), Expect = 1e-04
 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)

Query: 347 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN-DT 405
           EE FGPLL ++  D  +++  + N+    L+A L +++++   QF+  + AG  ++N + 
Sbjct: 374 EEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAG--IVNWNK 431

Query: 406 AVHLAVHSLPFGGVQESG 423
            +  A  + PFGGV  SG
Sbjct: 432 PLTGASSAAPFGGVGASG 449

Length = 487

>gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase

 Score = 42.1 bits (100), Expect = 4e-04
 Identities = 57/287 (19%), Positives = 99/287 (34%), Gaps = 52/287 (18%)

Query: 119 PFGVVLIISPWNYPF--------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---- 166
           P G V +    N+P            A+AAG  +V+K     P +S L+A+ +       
Sbjct: 105 PLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRAT 164

Query: 167 -MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLT--PVLLELG 221
            +      +++G   E    L        + +TG+ R  R +  AAA      P   ELG
Sbjct: 165 GLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELG 224

Query: 222 GKSPVVFDSGINLKVACR----------RMIMGKWGCNNGQACISPDHIITTKDYA-PKL 270
             +PV    G    +A R           + +G      GQ C +P  ++     A    
Sbjct: 225 SVNPVFILPG---ALAERGEAIAQGFVGSLTLG-----AGQFCTNPGLVLVPAGPAGDAF 276

Query: 271 LESLKNELENFYGKNPLESKD---LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK 327
           + +L   L          +     L+  +   +   +  L     V   ++ GG   +  
Sbjct: 277 IAALAEALA--------AAPAQTMLTPGIAEAYRQGVEALAAAPGVR--VLAGGAAAEGG 326

Query: 328 LRIAPTLL---LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 371
            + APTL             + EE+FGP   ++  D   +   +  +
Sbjct: 327 NQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEA 373

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454

>gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 76/351 (21%), Positives = 134/351 (38%), Gaps = 54/351 (15%)

Query: 114 EIVPEPFGVVLIIS-----PWN-YPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM 167
            IVP   G+ L+I       WN YP    ++A GN +++KP   A    +L  ++  E +
Sbjct: 190 TIVPR--GIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVL 247

Query: 168 -------DLSSIRV--VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLL 218
                  +L ++         A+  A  D     I +TG++   + +   A +    V  
Sbjct: 248 GEAGFDPNLVTLAAFDPGHEAAQRLA-TDPAVRIIDFTGSNAFGQWLEQNARQAQ--VYT 304

Query: 219 ELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD---------YAPK 269
           E  G + V+ +S  + K   R +        +GQ C +   I+  +D            +
Sbjct: 305 EKAGVNTVIIESTDDYKAMLRNLAF-SLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDE 363

Query: 270 LLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV---SGKIVHGGERDKN 326
           +   L   ++   G     +  L  I + +  AR+++     +V   S KI H  E    
Sbjct: 364 VAADLATAIDGLLGDPARATAVLGAIQSPDTLARIAEARALGEVLLASTKIEH-PEFPGA 422

Query: 327 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS-----GTKPLAAYLF 381
           ++R  P LL     D     +E FGP+  ++ VD    + ++        G   + AY  
Sbjct: 423 RVR-TPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAY-- 479

Query: 382 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGV---QESGMGAYHG 429
                   + V+ V        D AV L+++    GGV   Q +    +HG
Sbjct: 480 ----TTDPEVVDAVQE---AAWDAAVALSLNLT--GGVFVNQSAAFSDFHG 521

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	487
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
KOG2450	501	consensus Aldehyde dehydrogenase [Energy productio	100.0
KOG2451	503	consensus Aldehyde dehydrogenase [Energy productio	100.0
KOG2456	477	consensus Aldehyde dehydrogenase [Energy productio	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	100.0
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	100.0
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	100.0
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	100.0
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	100.0
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	100.0
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
PRK11903	521	aldehyde dehydrogenase; Provisional	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
PRK11809	1318	putA trifunctional transcriptional regulator/proli	100.0
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	100.0
KOG2454	583	consensus Betaine aldehyde dehydrogenase [Energy p	100.0
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	100.0
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	100.0
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	100.0
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	100.0
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	100.0
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	100.0
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	100.0
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	100.0
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	100.0
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	100.0
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	100.0
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	100.0
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	100.0
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	100.0
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	100.0
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	100.0
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	100.0
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	100.0
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	100.0
KOG2455	561	consensus Delta-1-pyrroline-5-carboxylate dehydrog	100.0
KOG2452	881	consensus Formyltetrahydrofolate dehydrogenase [Nu	100.0
KOG2453	507	consensus Aldehyde dehydrogenase [Energy productio	100.0
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	100.0
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	100.0
KOG4165	433	consensus Gamma-glutamyl phosphate reductase [Amin	99.97
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	99.76
KOG2449	157	consensus Methylmalonate semialdehyde dehydrogenas	99.41
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	99.3
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	97.97
cd06572	390	Histidinol_dh Histidinol dehydrogenase, HisD, E.C	97.21
TIGR00069	393	hisD histidinol dehydrogenase. This model describe	97.13
COG0141	425	HisD Histidinol dehydrogenase [Amino acid transpor	97.05
PF00815	412	Histidinol_dh: Histidinol dehydrogenase; InterPro:	96.83
PRK13770	416	histidinol dehydrogenase; Provisional	96.34
PRK00877	425	hisD bifunctional histidinal dehydrogenase/ histid	96.32
PRK12447	426	histidinol dehydrogenase; Reviewed	96.2
PLN02926	431	histidinol dehydrogenase	95.93
PRK11809	1318	putA trifunctional transcriptional regulator/proli	93.06
PRK13769	368	histidinol dehydrogenase; Provisional	89.18

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=1.5e-99  Score=785.27  Aligned_cols=471  Identities=70%  Similarity=1.142  Sum_probs=435.6

Q ss_pred             CCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHH
Q 011397           13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKE   92 (487)
Q Consensus        13 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~   92 (487)
                      ....+|+++++++|++||++|+.++.++|.++|+++++.|++|+++|+++++.|+|||..++...|+..+++.+++++++
T Consensus         6 ~~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~   85 (484)
T PLN02174          6 MFGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQ   85 (484)
T ss_pred             hcCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999999998756999999999999999


Q ss_pred             HhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh
Q 011397           93 LKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY  166 (487)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a  166 (487)
                      +++|.++..........+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.++++++.++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~~  165 (484)
T PLN02174         86 LKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQY  165 (484)
T ss_pred             HHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHh
Confidence            998876543222222223357889999999999999999997      99999999999999999999999999999999


Q ss_pred             cCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhc
Q 011397          167 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW  246 (487)
Q Consensus       167 lP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~  246 (487)
                      +|+|+||+|+|+.+.+..|+++++|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|
T Consensus       166 lp~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f  245 (484)
T PLN02174        166 LDSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKW  245 (484)
T ss_pred             CCCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHh
Confidence            99999999999777778888756999999999999999999999999999999999999999999999999999999998


Q ss_pred             cc-CCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCC
Q 011397          247 GC-NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK  325 (487)
Q Consensus       247 ~~-~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~  325 (487)
                       . |+||.|++++|||||++++|+|+++|+++++++++|||.+++++||++++.+++++.++|+++.+++++++||..+.
T Consensus       246 -~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ga~~~~GG~~~~  324 (484)
T PLN02174        246 -GCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKDR  324 (484)
T ss_pred             -hCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcCCEEEECCCcCC
Confidence             6 99999999999999999999999999999999999999888999999999999999999999866789999997655


Q ss_pred             CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCC
Q 011397          326 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT  405 (487)
Q Consensus       326 ~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~  405 (487)
                      +|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||++
T Consensus       325 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~  404 (484)
T PLN02174        325 ENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDI  404 (484)
T ss_pred             CCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             ccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCCCCCCCccCCCCchhHHHHHHHHHhcchhHHHHHHhhh
Q 011397          406 AVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGW  484 (487)
Q Consensus       406 ~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (487)
                      ..+...+.+||||+|.||+|+++|.+|+++|++.|+|..++.+.+.+++||||++.|.++++++++..++++-..+++|
T Consensus       405 ~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (484)
T PLN02174        405 AVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDIFKVLLGL  483 (484)
T ss_pred             cCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECCccCcccccCCCCChHHHHHHHHHHhhchhhhhhccccC
Confidence            6654457899999999999999999999999999999988766778899999999999999999987777776655555

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=1.4e-95  Score=758.31  Aligned_cols=470  Identities=52%  Similarity=0.868  Sum_probs=436.3

Q ss_pred             CCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHH
Q 011397           13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKE   92 (487)
Q Consensus        13 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~   92 (487)
                      .+..+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|+++++.|+|||..++...|+..+++.++++++.
T Consensus         2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~   81 (484)
T PLN02203          2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN   81 (484)
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999999999999999999999999657999999999999999


Q ss_pred             HhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh
Q 011397           93 LKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY  166 (487)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a  166 (487)
                      ++.+.............+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.++.+++.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~  161 (484)
T PLN02203         82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY  161 (484)
T ss_pred             HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence            888875432111111223466889999999999999999998      89999999999999999999999999999999


Q ss_pred             cCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcC---CCCHHHHHHHHHH
Q 011397          167 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS---GINLKVACRRMIM  243 (487)
Q Consensus       167 lP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~---daDl~~aa~~i~~  243 (487)
                      +|+|+||+|+|+.+.+..|+.|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++   |||+|.|++.+++
T Consensus       162 lP~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~  241 (484)
T PLN02203        162 LDSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVG  241 (484)
T ss_pred             CCcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHH
Confidence            9999999999987889999999999999999999999999999999999999999999999997   6999999999999


Q ss_pred             Hhccc-CCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCc
Q 011397          244 GKWGC-NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGE  322 (487)
Q Consensus       244 ~~~~~-~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~  322 (487)
                      ++| . |+||.|++++++|||++++|+|+++|++++.++++|||.+.+++||+++..+++++.++++++..++++++||.
T Consensus       242 ~~f-~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~~~~~~gg~  320 (484)
T PLN02203        242 GKW-GSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGS  320 (484)
T ss_pred             Hhc-ccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhCCeEEeCCC
Confidence            999 7 79999999999999999999999999999999999999887899999999999999999999877788999987


Q ss_pred             cCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEE
Q 011397          323 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI  402 (487)
Q Consensus       323 ~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~i  402 (487)
                      .+++|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus       321 ~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~I  400 (484)
T PLN02203        321 IDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTF  400 (484)
T ss_pred             cCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEE
Confidence            65568999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCCCCCCCccCCCCchhHHHHHHHHHhcchhHHHHHHh
Q 011397          403 NDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALL  482 (487)
Q Consensus       403 N~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  482 (487)
                      |++..+...+.+||||+|.||+|+++|.+++++|++.|+|+..+...+.+++|+||+++|.+++|.+.|..|++++..++
T Consensus       401 N~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  480 (484)
T PLN02203        401 NDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRSLLTEFEFRYPPWNDFKLGFLRLVYRFDYFGLLLLLL  480 (484)
T ss_pred             CCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcCccCcccccCCCCChHHHHHHHHHHhhcchhhhcccc
Confidence            99765555678999999999999999999999999999999887666888999999999999999999999999886555


Q ss_pred             h
Q 011397          483 G  483 (487)
Q Consensus       483 ~  483 (487)
                      +
T Consensus       481 ~  481 (484)
T PLN02203        481 G  481 (484)
T ss_pred             c
Confidence            4

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=8.7e-95  Score=755.78  Aligned_cols=457  Identities=46%  Similarity=0.782  Sum_probs=425.7

Q ss_pred             CCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHH
Q 011397           13 VFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKE   92 (487)
Q Consensus        13 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~   92 (487)
                      .++.+|+++++++|++||++|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++++
T Consensus         3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~   82 (493)
T PTZ00381          3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH   82 (493)
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999999999999999999999999767999999999999999


Q ss_pred             HhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh
Q 011397           93 LKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY  166 (487)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a  166 (487)
                      ++.|++...........+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.++.+++.++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~  162 (493)
T PTZ00381         83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY  162 (493)
T ss_pred             HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh
Confidence            999986654322211223467889999999999999999987      89999999999999999999999999999999


Q ss_pred             cCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhc
Q 011397          167 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW  246 (487)
Q Consensus       167 lP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~  246 (487)
                      +|+|++++++|+.+.+..|+++++|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus       163 lp~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~  242 (493)
T PTZ00381        163 LDPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKF  242 (493)
T ss_pred             CCcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHH
Confidence            99999999999888889999989999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCC
Q 011397          247 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN  326 (487)
Q Consensus       247 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~  326 (487)
                       .|+||.|+++++||||++++|+|+++|+++++.++.+++.+++++||+++..+.+++.+++++  +++++++||..+.+
T Consensus       243 -~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~--~ga~~~~gG~~~~~  319 (493)
T PTZ00381        243 -LNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKD--HGGKVVYGGEVDIE  319 (493)
T ss_pred             -hhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHh--CCCcEEECCCcCCC
Confidence             999999999999999999999999999999999875555558999999999999999999975  67899999987666


Q ss_pred             CceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCc
Q 011397          327 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA  406 (487)
Q Consensus       327 g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~  406 (487)
                      ++|+.|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.+.++++++++++|.|+||++.
T Consensus       320 ~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~  399 (493)
T PTZ00381        320 NKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCV  399 (493)
T ss_pred             CCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC--CCCCCCccCCCCchhHHHHHHHHHhc
Q 011397          407 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG--FIGDVPVRYPPYTKGKLRLLKVLISG  472 (487)
Q Consensus       407 ~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  472 (487)
                      .+...+.+||||+|.||+|++||.+|+++||+.|+|..++  .+.+..++||||+.++.+++++++|.
T Consensus       400 ~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~  467 (493)
T PTZ00381        400 FHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYTSFKSWVLSFLLKL  467 (493)
T ss_pred             ccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEccccccCcccccCCCCChHHHHHHHHHHhc
Confidence            6666789999999999999999999999999999999886  44567789999999999999998874

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=2.3e-93  Score=738.85  Aligned_cols=435  Identities=31%  Similarity=0.471  Sum_probs=406.4

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++|+++|+.||+.|+.+++.+|.++|++++++|++++++|++++++|+|||+.+++ .|+..++
T Consensus        23 tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i~ea~-~ei~~~~  101 (472)
T COG1012          23 TGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPISEAR-GEIARAA  101 (472)
T ss_pred             CCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            448899999999999999999999999999999999999999999999999999999999999999999999 7899999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++..+.+.... ...   ......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       102 ~~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~  177 (472)
T COG1012         102 DFIRYYAEEARRLEGET-IPT---DKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSAL  177 (472)
T ss_pred             HHHHHHHHHHHHhcCCc-cCC---CCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHH
Confidence            99999999988665433 111   114588899999999999999999997      99999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .+++++.++ +|+|++|+|+| +.+.++.|+.|+ ||+|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       178 ~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~~~lELGGk~p~IV~~dAdl  257 (472)
T COG1012         178 ALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLEDADL  257 (472)
T ss_pred             HHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCcEEEECCCCCCeEECCCCCH
Confidence            999999877 99999999999 566899999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhh-hcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      |.|++.+++++| +|+||.|++++|+|||+++||+|+++|.++ ++ +++||+.| .+++||++++.+++++.++|+++.
T Consensus       258 ~~Av~~~~~g~f-~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~  335 (472)
T COG1012         258 DAAVDAAVFGAF-FNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAV  335 (472)
T ss_pred             HHHHHHHHHHHH-hCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999 999999999999999999999999999999 65 89999655 899999999999999999999997


Q ss_pred             c-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          313 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       313 ~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      . ++.++.||.... |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++.|||+++|||+|..++.++
T Consensus       336 ~~G~~~~~Gg~~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~  414 (472)
T COG1012         336 AEGARLLAGGKRPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRV  414 (472)
T ss_pred             HcCCEEEeCCcCCC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence            6 567788887433 89999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++|+|+||++..+...+.+||||+|.||+|+++|.+++++|++.|+|....
T Consensus       415 ~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~  469 (472)
T COG1012         415 ARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL  469 (472)
T ss_pred             HhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence            9999999999999754456788999999999999999999999999999998764

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=4.3e-93  Score=742.65  Aligned_cols=434  Identities=23%  Similarity=0.373  Sum_probs=404.2

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      ++|.+++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus        35 tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  113 (482)
T PRK11241         35 NGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAA  113 (482)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence            468899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++...+....... ..  ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       114 ~~~~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~  190 (482)
T PRK11241        114 SFIEWFAEEGKRIYGDTI-PG--HQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL  190 (482)
T ss_pred             HHHHHHHHHHHHhcCccc-cc--CCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHH
Confidence            999999877665432111 11  0112345788999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .+.+++.++ +|+|++|+|+| +.+.++.|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       191 ~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~~~~lElGGknp~IV~~dADl  270 (482)
T PRK11241        191 ALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADL  270 (482)
T ss_pred             HHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEEcCCCCH
Confidence            999999998 99999999998 467789999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      |.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.+
T Consensus       271 d~aa~~i~~~~f-~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~  349 (482)
T PRK11241        271 DKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALE  349 (482)
T ss_pred             HHHHHHHHHHHH-hcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999999974


Q ss_pred             -CCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 -SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 -~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                       ++++++||..++ +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++
T Consensus       350 ~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~  429 (482)
T PRK11241        350 KGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRV  429 (482)
T ss_pred             CCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHH
Confidence             679999997543 589999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      ++++++|.||||++..  ..+.+||||+|.||+|+++|.+|+++||+.|+|.+
T Consensus       430 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~  480 (482)
T PRK11241        430 GEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI  480 (482)
T ss_pred             HHHcCccEEEECCCCC--CCCCCCcCCccccccCcccHHHHHHHhhcceEEEE
Confidence            9999999999998654  34578999999999999999999999999999865

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=8.9e-93  Score=746.27  Aligned_cols=436  Identities=21%  Similarity=0.290  Sum_probs=406.7

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||+.+++ .|+..++
T Consensus       138 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~-~EV~~~i  216 (604)
T PLN02419        138 TQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSH-GDIFRGL  216 (604)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+..+.+....   ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       217 ~~~~~~a~~a~~~~g~~~~---~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~  293 (604)
T PLN02419        217 EVVEHACGMATLQMGEYLP---NVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASV  293 (604)
T ss_pred             HHHHHHHHHHHHhhCCccc---ccCCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHH
Confidence            9999999888766532211   01123356789999999999999999999      88999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      .+++++.++ +|+|+||+|+|+.+.++.|+.|+ ||.|+||||+++|+.|++.++++++|+++|+|||||+||++|||+|
T Consensus       294 ~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld  373 (604)
T PLN02419        294 ILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANID  373 (604)
T ss_pred             HHHHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHH
Confidence            999999998 99999999999777889999986 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|++++|||||++ +|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|++|++ 
T Consensus       374 ~Aa~~iv~g~f-~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~  451 (604)
T PLN02419        374 ATLNALLAAGF-GAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDD  451 (604)
T ss_pred             HHHHHHHHHHH-hhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhc
Confidence            99999999999 999999999999999999 8999999999999999999988 8999999999999999999999975 


Q ss_pred             CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          314 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       314 ~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      |+++++||...     .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+
T Consensus       452 GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a  531 (604)
T PLN02419        452 GAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAA  531 (604)
T ss_pred             CCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence            67999999642     3589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEeC
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g--~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++++++|.|+||+.. +...+.+||||+|.||+|  +++|.+|+++|++.|+|++..
T Consensus       532 ~~~a~~l~aG~V~IN~~~-~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~  590 (604)
T PLN02419        532 RKFQMDIEAGQIGINVPI-PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ  590 (604)
T ss_pred             HHHHHhCCeeeEEEcCCC-CCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence            999999999999999863 334578999999999999  799999999999999998775

>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=3.7e-94  Score=711.84  Aligned_cols=436  Identities=26%  Similarity=0.401  Sum_probs=409.2

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA   80 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~   80 (487)
                      +.+|.+++|+..+.+||+.++++|++||+  .|+.++..+|.++|++++++++++++.|+...+.+.|||+.+++..++.
T Consensus        44 ~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~  123 (501)
T KOG2450|consen   44 ATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLP  123 (501)
T ss_pred             CCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCch
Confidence            45678999999999999999999999999  7999999999999999999999999999999999999999999988999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      .+++.++|++....... .+   ..........+++++|+|||+.|.|||||+.      +|||++||+||+||++++|+
T Consensus       124 ~~~~~~ry~ag~ad~~~-~~---~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tpl  199 (501)
T KOG2450|consen  124 PAIDCFRYYAGWADKIH-GS---TIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPL  199 (501)
T ss_pred             hhhhHHHhhccchhhcc-cc---cCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCc
Confidence            99999999977665441 11   1111233478899999999999999999998      99999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc-cccceeeecCCCCcEEEcC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDS  230 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~-~~~p~~~e~gG~~p~iV~~  230 (487)
                      |+..+++++.++ +|+|++|+|+| +.+.+.+|.+|+ |+.|.||||+.+|+.|++++++ ++||+++|+|||||.||++
T Consensus       200 sal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~  279 (501)
T KOG2450|consen  200 TALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIVFD  279 (501)
T ss_pred             hHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcCCceeccccCCCCcceEec
Confidence            999999999998 99999999999 788999999997 9999999999999999998884 5899999999999999999


Q ss_pred             CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhh-hcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 011397          231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNPLE-SKDLSRIVNSNHFARLSKLL  308 (487)
Q Consensus       231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~~-~~~~gpl~~~~~~~~~~~~i  308 (487)
                      |||+|.|++.+..+.| +|+||.|++.+|+|||+++||+|+++++++..+ +++|||.+ .+.+||.++..|++++.+||
T Consensus       280 Dadld~av~~~~~~iF-~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi  358 (501)
T KOG2450|consen  280 DADLDLAVENAAFGIF-FNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYI  358 (501)
T ss_pred             ccchHHHHHHHHHHhh-cccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHH
Confidence            9999999999999999 999999999999999999999999999999966 99999999 89999999999999999999


Q ss_pred             HHHHc-CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          309 DDDKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       309 ~~a~~-~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      +.+++ |+++++||.. .+.|+|+.|||+.++.++|.+++||+||||+.|++|++.||+|+++|++.|||+++|||+|.+
T Consensus       359 ~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~  438 (501)
T KOG2450|consen  359 ESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLD  438 (501)
T ss_pred             HHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChH
Confidence            99975 7899999965 357999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++.++++++++|+||||++..  ..+..||||+|+||+||+.|.+++++|++.|+|++.
T Consensus       439 ~a~~va~~l~aGtVwiN~y~~--~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~  495 (501)
T KOG2450|consen  439 KAHRVANALQAGTVWINCYNV--FDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVK  495 (501)
T ss_pred             HHHHHHHHhcCceEEEecccc--ccccCCccccccccCCccccHHHHhhcceeeEEEEe
Confidence            999999999999999999654  679999999999999999999999999999999876

>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=4.6e-93  Score=673.19  Aligned_cols=437  Identities=26%  Similarity=0.387  Sum_probs=412.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      ..|.+++|+.++.++.++|+++|.+||++|+.++..+|.++|+++.++|.+|.++|++++++|.|||+.|++ +||..+.
T Consensus        48 ~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL~eA~-gEv~y~a  126 (503)
T KOG2451|consen   48 NGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKPLGEAK-GEVAYSA  126 (503)
T ss_pred             ccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCchhhcc-ceeehhH
Confidence            457899999999999999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      ..++||+++.++.+......   .....+..+.++|+||+++|+|||||.+      .+||++||+||+||+.+||+++.
T Consensus       127 ~f~eWyAeEA~RvyGdii~s---~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaL  203 (503)
T KOG2451|consen  127 AFFEWYAEEARRVYGDIIPS---LNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSAL  203 (503)
T ss_pred             HHHHHHHHHhhhhhccccCC---CCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHH
Confidence            99999999998877544322   1233477889999999999999999998      88999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCC----hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGA----VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~----~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      .++++..++ +|+|++|+|+++    .+.+++|+.+| |+.|+||||+.+|+.++++++...|++.+|+|||.|.||++|
T Consensus       204 ala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsastvKkvslELGGNAPfIVFdd  283 (503)
T KOG2451|consen  204 ALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSASTVKKVSLELGGNAPFIVFDD  283 (503)
T ss_pred             HHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhhhhhhheehhhcCCCceEEecC
Confidence            999999998 999999999963    36789999998 999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||+|.|++.....+| .++||.|.+.+|+|||+++||+|+.+|.++++++++||.++ .+..||+|++.+.++++.++++
T Consensus       284 adld~Av~g~mA~KF-r~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~D  362 (503)
T KOG2451|consen  284 ADLDQAVEGAMACKF-RNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVED  362 (503)
T ss_pred             cCHHHHHHHHHHhhh-ccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999999 8999999999999999999999


Q ss_pred             HHc-CCeEeeCCcc-CCC-CceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          311 DKV-SGKIVHGGER-DKN-KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       311 a~~-~~~~~~gg~~-~~~-g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      |.. ++++++||+. .+. .+|++|||+.+++.+|.+.+||+|||+.+|++|+|.+|+|+++|++..||+.|+||+|.++
T Consensus       363 AvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~  442 (503)
T KOG2451|consen  363 AVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSR  442 (503)
T ss_pred             HHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHH
Confidence            985 7899999984 444 4999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCC
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF  447 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~  447 (487)
                      ..+++++|++|.|-+|....  .....||||+|+||+||+++++|+++|+..|++.+...
T Consensus       443 ~~rVae~LEvGmVGvNegli--s~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~L  500 (503)
T KOG2451|consen  443 LFRVAEALEVGMVGVNEGLI--SDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGTL  500 (503)
T ss_pred             HHHHHHHHhcceeeccccee--cccccCcCCccccccCccccccchhhhhhhheeeecCc
Confidence            99999999999999999654  56889999999999999999999999999999988764

>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=7.4e-93  Score=677.79  Aligned_cols=463  Identities=54%  Similarity=0.910  Sum_probs=444.0

Q ss_pred             HHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhhc
Q 011397           19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT   98 (487)
Q Consensus        19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~   98 (487)
                      ++..++++|.+|.+-++-|.+.|.+.|+++...+++|.++|.+++..|.+|+..++...|+...++.++++.+++.+|++
T Consensus         4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~   83 (477)
T KOG2456|consen    4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK   83 (477)
T ss_pred             HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence            45669999999999999999999999999999999999999999999999999999989999999999999999999999


Q ss_pred             CCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcE
Q 011397           99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI  172 (487)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v  172 (487)
                      ++.......+.....++..+|+|||++|+|||||+.      ++||+|||+||+|||+.+|.++..+++++-+.++.+++
T Consensus        84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Yld~~~~  163 (477)
T KOG2456|consen   84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQYLDQDLI  163 (477)
T ss_pred             ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHhcCcceE
Confidence            988776666666789999999999999999999998      89999999999999999999999999999999999999


Q ss_pred             EEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCC
Q 011397          173 RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ  252 (487)
Q Consensus       173 ~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq  252 (487)
                      .+|.|+.+...+|++++.|.|+||||+.+|+.|+.+++++++||++|+|||||++|++|+|++-++++|+|+++ +|+||
T Consensus       164 ~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~-~N~GQ  242 (477)
T KOG2456|consen  164 RVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW-MNSGQ  242 (477)
T ss_pred             EEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh-ccCCC
Confidence            99999988888999999999999999999999999999999999999999999999999999999999999999 99999


Q ss_pred             ccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceeec
Q 011397          253 ACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP  332 (487)
Q Consensus       253 ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~P  332 (487)
                      .|.++++|+++.+++++++++++..+++++..|+.++.+++++++..|++|+.+++++   .+++++||..+....|+.|
T Consensus       243 tCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~---~~kv~~Gg~~d~~d~~I~P  319 (477)
T KOG2456|consen  243 TCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDE---TGKVAIGGESDESDRYIAP  319 (477)
T ss_pred             eeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcC---CCceecCCccchhhcccCC
Confidence            9999999999999999999999999999999999999999999999999999999974   3899999999888899999


Q ss_pred             EEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCCC
Q 011397          333 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVH  412 (487)
Q Consensus       333 tv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~  412 (487)
                      ||+.++++++++|+||+||||++|+.+++++|+|+.+|..+..|++|+||+|.+.++++.+++.+|.|.+|+...|....
T Consensus       320 TIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~  399 (477)
T KOG2456|consen  320 TILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLD  399 (477)
T ss_pred             eEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCCCCCC--CccCCCCchhHHHHHHHHHhcchhHHHHHHhhhc
Q 011397          413 SLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV--PVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS  485 (487)
Q Consensus       413 ~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (487)
                      .+||||+|.||+|++||++|+++|++.|++..++++.+.  ..|||||+.+|+++++++++...+....+.+++.
T Consensus       400 ~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs~~~d~~~~~RYPP~S~~K~~~lr~~~~~~~~~~i~~~~~~~  474 (477)
T KOG2456|consen  400 SLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRSLGGDKLLALRYPPYSPQKLTLLRFLLESRLFQAILLSAGLL  474 (477)
T ss_pred             ccCcCCcCccccccccccccccccccchhhhhcccccchhhhhcCCCCChHHHHHHHHHHHhHHHHHHHHhheeE
Confidence            999999999999999999999999999999999998888  7899999999999999999888777777666554

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=2.2e-91  Score=729.34  Aligned_cols=435  Identities=23%  Similarity=0.351  Sum_probs=403.2

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..++
T Consensus        25 tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~  104 (472)
T TIGR03374        25 TGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIV  104 (472)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999988646999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++...+... .....  ....+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       105 ~~~~~~a~~~~~~~-~~~~~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~  181 (472)
T TIGR03374       105 DVFRFFAGAARCLS-GLAAG--EYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL  181 (472)
T ss_pred             HHHHHHHHHHHHhc-CcccC--ccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHH
Confidence            99999987765432 21110  00122356789999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      .+++++.+++|+|++|+|+| +.+.++.|+.|+ +|.|.||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus       182 ~l~~l~~~~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~  261 (472)
T TIGR03374       182 KLAELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVFDDADID  261 (472)
T ss_pred             HHHHHHHHhCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcccceEEecCCCCeeEECCCCCHH
Confidence            99999998999999999999 567889999996 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++|+++.+ 
T Consensus       262 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~  340 (472)
T TIGR03374       262 AVVEGVRTFGF-YNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKAL  340 (472)
T ss_pred             HHHHHHHHHHH-hhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHc
Confidence            99999999999 99999999999999999999999999999999999999988 8999999999999999999999875 


Q ss_pred             C-CeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 S-GKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 ~-~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      + +++++||...+ .|+|+.|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.++++++
T Consensus       341 G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~  420 (472)
T TIGR03374       341 GHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRL  420 (472)
T ss_pred             CCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence            4 48999987643 589999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      ++++++|.|+||+...  ..+.+||||+|.||+|+++|.+|+++|++.|+++.
T Consensus       421 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~  471 (472)
T TIGR03374       421 SARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV  471 (472)
T ss_pred             HHhCCcceEEECCCCC--CCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence            9999999999998654  45789999999999999999999999999999864

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-91  Score=724.41  Aligned_cols=434  Identities=21%  Similarity=0.356  Sum_probs=405.7

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++..+.+++++++++|++||+.|++++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus        16 t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~   94 (462)
T PRK13968         16 TGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQAR-AEVAKSA   94 (462)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++.....+.......    ......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~  170 (462)
T PRK13968         95 NLCDWYAEHGPAMLKAEPTL----VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQ  170 (462)
T ss_pred             HHHHHHHHHHHHhhCCcccc----CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence            99999999887775433211    123456788999999999999999997      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      ++.+++.++ +|+|++|+|+|+.+.+..|+.|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||++
T Consensus       171 ~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~~dAdl~  250 (462)
T PRK13968        171 LIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLE  250 (462)
T ss_pred             HHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEECCCCCHH
Confidence            999999998 99999999998555556688886 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++++.. 
T Consensus       251 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~  329 (462)
T PRK13968        251 LAVKAAVAGRY-QNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAE  329 (462)
T ss_pred             HHHHHHHHHHH-hccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC
Confidence            99999999999 99999999999999999999999999999999999999988 8999999999999999999999864 


Q ss_pred             CCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397          314 SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV  392 (487)
Q Consensus       314 ~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~  392 (487)
                      ++++++||.... +|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|++++||+++|||+|.+.+++++
T Consensus       330 Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~  409 (462)
T PRK13968        330 GARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMA  409 (462)
T ss_pred             CCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHH
Confidence            679999997543 4899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +++++|+|+||+...  ..+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus       410 ~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~  460 (462)
T PRK13968        410 ARLECGGVFINGYCA--SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD  460 (462)
T ss_pred             HhCCcceEEECCCCC--CCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence            999999999998643  457899999999999999999999999999999765

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=1.4e-90  Score=727.68  Aligned_cols=436  Identities=24%  Similarity=0.363  Sum_probs=405.3

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.+.+++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus        45 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~  124 (501)
T PLN02766         45 TGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPA  124 (501)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence            4678999999999999999999999997  59999999999999999999999999999999999999999987569999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.+++++....++.. +....   ......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       125 ~~~~l~~~a~~~~~~~g-~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~  200 (501)
T PLN02766        125 AAGLLRYYAGAADKIHG-ETLKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLS  200 (501)
T ss_pred             HHHHHHHHHHHHHHhcC-ceecc---CCCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHH
Confidence            99999999988776543 21110   112356788999999999999999998      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh-ccccceeeecCCCCcEEEcCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~-~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      +.++.+++.++ +|+|++|+|+| +.+.+..|++|+ +|.|.||||+.+|+.|++.++ ++++|+++|+|||||+||++|
T Consensus       201 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~d  280 (501)
T PLN02766        201 ALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDD  280 (501)
T ss_pred             HHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCC
Confidence            99999999998 99999999999 567789999997 999999999999999999998 589999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||+|.|++.+++++| +|+||.|+++++||||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++|++
T Consensus       281 ADl~~Aa~~i~~g~f-~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~  359 (501)
T PLN02766        281 ADVDMAVDLALLGIF-YNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEH  359 (501)
T ss_pred             CCHHHHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999998 8999999999999999999999


Q ss_pred             HHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          311 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       311 a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      +.. ++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+
T Consensus       360 a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a  439 (501)
T PLN02766        360 GKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVA  439 (501)
T ss_pred             HHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence            865 67999999753 4689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++++++|+|+||+..  ...+.+||||+|.||+|+++|.+++++|++.|+|+...
T Consensus       440 ~~~~~~l~~G~v~iN~~~--~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~  495 (501)
T PLN02766        440 NTVSRSIRAGTIWVNCYF--AFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPL  495 (501)
T ss_pred             HHHHHhCCcceEEECCCC--CCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence            999999999999999854  35678999999999999999999999999999998764

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=1.5e-90  Score=716.03  Aligned_cols=440  Identities=50%  Similarity=0.882  Sum_probs=405.7

Q ss_pred             HHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcCC
Q 011397           21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE  100 (487)
Q Consensus        21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~  100 (487)
                      +.+++|++||+.|+.++..+|.++|++++++|+++.++|+++++.|+|||+.++...|+..+++.++++++.++.+...+
T Consensus         2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (449)
T cd07136           2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK   81 (449)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999999999999999999999999999974699999999999999888776543


Q ss_pred             ccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcEEE
Q 011397          101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV  174 (487)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~~  174 (487)
                      .........+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~alP~gv~~~  161 (449)
T cd07136          82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAV  161 (449)
T ss_pred             ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHhCCCCEEEE
Confidence            2211111123356789999999999999999987      8999999999999999999999999999999999999999


Q ss_pred             EeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCCcc
Q 011397          175 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC  254 (487)
Q Consensus       175 v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C  254 (487)
                      |+|+.+.+..|+.|++|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||+|.|++.+++++| .|+||.|
T Consensus       162 v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~-~~~GQ~C  240 (449)
T cd07136         162 VEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKF-LNAGQTC  240 (449)
T ss_pred             EeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHH-cccCCcc
Confidence            999777889999778999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             ccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceeecEE
Q 011397          255 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTL  334 (487)
Q Consensus       255 ~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv  334 (487)
                      +++++||||++++|+|+++|+++++++++|+|.+.+++||++++.+.+++.+++++    +++++||..+.+|+|+.|||
T Consensus       241 ~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~----a~~~~gG~~~~~g~~~~Ptv  316 (449)
T cd07136         241 VAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDN----GKIVFGGNTDRETLYIEPTI  316 (449)
T ss_pred             cCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhc----ceEEECCCcCCCCCEEeeEE
Confidence            99999999999999999999999999999999888999999999999999999986    48999997655689999999


Q ss_pred             EecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCCCCC
Q 011397          335 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL  414 (487)
Q Consensus       335 ~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~  414 (487)
                      +.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||+...+...+.+
T Consensus       317 l~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~  396 (449)
T cd07136         317 LDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYL  396 (449)
T ss_pred             EecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987654445789


Q ss_pred             CcccCCCCCCCCcchHHHHHHhhhccEEEEeCCCCCCCccCCCCchhHHHH
Q 011397          415 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRL  465 (487)
Q Consensus       415 pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~~~~~  465 (487)
                      ||||+|.||+|+++|.+++++||+.|+|+....+++.+++|+|++.++.++
T Consensus       397 PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~~~~~~~~  447 (449)
T cd07136         397 PFGGVGNSGMGSYHGKYSFDTFSHKKSILKKSTWFDLPLRYPPYKGKKKKL  447 (449)
T ss_pred             CccCcCcccCCcccCHHHHHHhccceEEEEcCCcCCccccCCCCchHHHhh
Confidence            999999999999999999999999999988766677889999998666553

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=1.5e-90  Score=721.06  Aligned_cols=436  Identities=23%  Similarity=0.381  Sum_probs=406.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++..+.+|+++++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..++
T Consensus        10 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~   88 (457)
T PRK09406         10 TGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAK-AEALKCA   88 (457)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence            567899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+.++......... .......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~  167 (457)
T PRK09406         89 KGFRYYAEHAEALLADEPADAA-AVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTAL  167 (457)
T ss_pred             HHHHHHHHHHHHHhCCcccccc-CCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHH
Confidence            9999999998887644321110 0112356788999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      ++.+++.++ +|+|+||+|+++.+.+..|+.|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||++
T Consensus       168 ~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~dadl~  247 (457)
T PRK09406        168 YLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMPSADLD  247 (457)
T ss_pred             HHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECCCCCHH
Confidence            999999998 99999999987656778899886 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++.+ 
T Consensus       248 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~  326 (457)
T PRK09406        248 RAAETAVTARV-QNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAA  326 (457)
T ss_pred             HHHHHHHHHHh-hCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHC
Confidence            99999999999 99999999999999999999999999999999999999998 8999999999999999999999864 


Q ss_pred             CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397          314 SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV  392 (487)
Q Consensus       314 ~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~  392 (487)
                      ++++++||..+ .+|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.+++++
T Consensus       327 Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~  406 (457)
T PRK09406        327 GATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFI  406 (457)
T ss_pred             CCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence            67999999764 35899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      +++++|+|+||+++.  ..+.+||||+|.||+|+++|.+++++|++.|+|..
T Consensus       407 ~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~  456 (457)
T PRK09406        407 DDLEAGQVFINGMTV--SYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI  456 (457)
T ss_pred             HhCCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence            999999999999764  45789999999999999999999999999999864

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=6.7e-90  Score=719.37  Aligned_cols=434  Identities=26%  Similarity=0.404  Sum_probs=403.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|++++++.|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..+++..|+..++
T Consensus        25 t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i  104 (475)
T cd07117          25 NGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAA  104 (475)
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999756999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+..... ....   .......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       105 ~~l~~~a~~~~~~~~-~~~~---~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~  180 (475)
T cd07117         105 DHFRYFAGVIRAEEG-SANM---IDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLL  180 (475)
T ss_pred             HHHHHHHHHHHHhcC-cccc---cCCCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHH
Confidence            999999877654322 1111   1122356789999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      .+++++.+++|+|++|+|+| +.+.+..|+.|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++|||++
T Consensus       181 ~l~~~~~~~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~  260 (475)
T cd07117         181 ELAKIIQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFDDANWD  260 (475)
T ss_pred             HHHHHHHHhCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEeCCCCCeEEECCCCChH
Confidence            99999999999999999998 567789999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|+++++||||++++|+|+++|.+++.++++|+|.+ ++++||++++.+++++.++++++.+ 
T Consensus       261 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~  339 (475)
T cd07117         261 KALEGAQLGIL-FNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEE  339 (475)
T ss_pred             HHHHHHHHHHh-hccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHC
Confidence            99999999999 99999999999999999999999999999999999999988 8999999999999999999999875 


Q ss_pred             CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          314 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       314 ~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      ++++++||...     ++|+|++|||+.++++++++++||+||||++|++|+|.+|||+++|++++||+++|||+|.+.+
T Consensus       340 Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~  419 (475)
T cd07117         340 GAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRA  419 (475)
T ss_pred             CCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHH
Confidence            67999998753     2589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      .++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++||+.|+|+.
T Consensus       420 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~  473 (475)
T cd07117         420 LRVARAVETGRVWVNTYNQ--IPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYI  473 (475)
T ss_pred             HHHHHhCCcceEEECCCCC--CCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEE
Confidence            9999999999999998543  46789999999999999999999999999999865

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=8.7e-90  Score=720.64  Aligned_cols=439  Identities=25%  Similarity=0.364  Sum_probs=403.4

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhh-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +++.+++++.++.+|+++++++|++|++. |+.++.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+
T Consensus        24 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~  103 (477)
T cd07113          24 TEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQS  103 (477)
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999985 99999999999999999999999999999999999999999874599999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccc--cCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSIT--TFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      ++.++++++....+...........  ......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.
T Consensus       104 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~  183 (477)
T cd07113         104 ANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPL  183 (477)
T ss_pred             HHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence            9999999876655432111000000  112256789999999999999999988      79999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      ++.++.+++.++ +|+|+||+|+|+.+.+..|++|+ +|.|.||||+++|+.|.+.++++++|+++|+|||||+||++||
T Consensus       184 ~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGkn~~iV~~dA  263 (477)
T cd07113         184 TLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAAAFLKDA  263 (477)
T ss_pred             HHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhhcCceEeecCCCCeeEECCCC
Confidence            999999999998 99999999999555888999997 9999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ +++|||++++.+++++.++|+++
T Consensus       264 dl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a  342 (477)
T cd07113         264 DIDWVVEGLLTAGF-LHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDA  342 (477)
T ss_pred             CHHHHHHHHHHHHH-hhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999998 89999999999999999999998


Q ss_pred             H-cCCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          312 K-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       312 ~-~~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                      . +++++++||... .+|+|+.|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++
T Consensus       343 ~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~  422 (477)
T cd07113         343 RAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKAL  422 (477)
T ss_pred             HHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence            6 478999999754 35899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+|+.+
T Consensus       423 ~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  476 (477)
T cd07113         423 RYIPRIEAGTVWVNMHTF--LDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR  476 (477)
T ss_pred             HHHHhCCcceEEECCCCC--CCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence            999999999999998643  457899999999999999999999999999998754

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=8.4e-90  Score=719.27  Aligned_cols=438  Identities=22%  Similarity=0.340  Sum_probs=402.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.+.+++++.++.+|+++++++|++||+  .|+.+|.++|.++|++++++|++++++|+++++.|+|||..++...|+..
T Consensus        30 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~  109 (486)
T cd07140          30 DGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGM  109 (486)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence            4578999999999999999999999998  59999999999999999999999999999999999999999986469999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.+++++...+...................+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       110 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~  189 (486)
T cd07140         110 SIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLT  189 (486)
T ss_pred             HHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHH
Confidence            99999999877765432111100000011135688999999999999999987      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc-cccceeeecCCCCcEEEcCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~-~~~p~~~e~gG~~p~iV~~d  231 (487)
                      +..+++++.++ +|+|++|+|+| +.+.++.|+.|+ |+.|+||||+++|+.|++.++. ++||+++|+|||||+||++|
T Consensus       190 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~d  269 (486)
T cd07140         190 ALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFAD  269 (486)
T ss_pred             HHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCC
Confidence            99999999998 99999999998 556789999997 9999999999999999999996 89999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||++.|++.+++++| .|+||.|+++++||||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++|++
T Consensus       270 adl~~a~~~i~~~~~-~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~  348 (486)
T cd07140         270 CDMDKAVRMGMSSVF-FNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCER  348 (486)
T ss_pred             CCHHHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999998 8999999999999999999999


Q ss_pred             HHc-CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          311 DKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       311 a~~-~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      +++ ++++++||.. +.+|+|++|||+.+++++|.+++||+||||++|++|+  |++|||+++|+++|||++||||+|.+
T Consensus       349 a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~  428 (486)
T cd07140         349 GVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDIN  428 (486)
T ss_pred             HHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHH
Confidence            975 7799999975 3468999999999999999999999999999999998  69999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      .++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus       429 ~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~  484 (486)
T cd07140         429 KALYVSDKLEAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTI  484 (486)
T ss_pred             HHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEE
Confidence            999999999999999999643  45679999999999999999999999999999875

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=1.4e-89  Score=720.24  Aligned_cols=436  Identities=26%  Similarity=0.386  Sum_probs=405.1

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus        49 tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~i  127 (498)
T PLN02278         49 TGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAI-GEVAYGA  127 (498)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            457889999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++.....+..... .  ........+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       128 ~~~~~~~~~~~~~~g~~~-~--~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~  204 (498)
T PLN02278        128 SFLEYFAEEAKRVYGDII-P--SPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTAL  204 (498)
T ss_pred             HHHHHHHHHHHHhcCccc-c--cCCCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence            999999988876642211 1  11112355678899999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .+.+++.++ +|+|++|+|+|+ .+.++.|+.|+ +|.|.||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       205 ~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl  284 (498)
T PLN02278        205 AAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADL  284 (498)
T ss_pred             HHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCH
Confidence            999999998 999999999984 46788999996 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      |.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++..
T Consensus       285 ~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~  363 (498)
T PLN02278        285 DVAVKGALASKF-RNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVS  363 (498)
T ss_pred             HHHHHHHHHHHh-ccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHh
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999999864


Q ss_pred             -CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 -SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 -~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                       ++++++||... .+|+|+.|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++
T Consensus       364 ~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~  443 (498)
T PLN02278        364 KGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRV  443 (498)
T ss_pred             CCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence             77999999764 3589999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++|.|+||+...  ..+.+||||+|.||+|+++|++|+++|++.|+|..++
T Consensus       444 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~  496 (498)
T PLN02278        444 SEALEYGIVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLGN  496 (498)
T ss_pred             HHhCCcCeEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEec
Confidence            9999999999998654  3467899999999999999999999999999997654

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=3.5e-89  Score=719.87  Aligned_cols=436  Identities=26%  Similarity=0.372  Sum_probs=402.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.|.+++++..+.+|+++|+++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..
T Consensus        82 tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~  161 (538)
T PLN02466         82 TGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPM  161 (538)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            5678999999999999999999999998  49999999999999999999999999999999999999999987579999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.+++++....+... ....   .......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       162 ~~~~l~~~a~~~~~~~g-~~~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~  237 (538)
T PLN02466        162 FARLFRYYAGWADKIHG-LTVP---ADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS  237 (538)
T ss_pred             HHHHHHHHHHHHHHhcC-cccc---cCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHH
Confidence            99999999876655432 1111   1112356789999999999999999988      799999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc-cccceeeecCCCCcEEEcCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~-~~~p~~~e~gG~~p~iV~~d  231 (487)
                      +.++++++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|.||||+++|+.|++.++. ++||+++|+|||||+||++|
T Consensus       238 ~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~d  317 (538)
T PLN02466        238 ALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCED  317 (538)
T ss_pred             HHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCC
Confidence            99999999998 99999999999 556788999996 9999999999999999998884 89999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++.++++|||.+ ++++||+++..+++++.+++++
T Consensus       318 ADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~  396 (538)
T PLN02466        318 ADVDKAVELAHFALF-FNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKS  396 (538)
T ss_pred             CCHHHHHHHHHHHHH-hhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999988 8999999999999999999999


Q ss_pred             HHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          311 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       311 a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      +.+ ++++++||... .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus       397 a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a  476 (538)
T PLN02466        397 GVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTA  476 (538)
T ss_pred             HHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence            864 67999998763 3588999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++++++|.|+||++.  ...+.+||||+|.||+|+++|.+|+++|++.|+|+...
T Consensus       477 ~~~~~~l~aG~v~IN~~~--~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~  532 (538)
T PLN02466        477 NTLSRALRVGTVWVNCFD--VFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPL  532 (538)
T ss_pred             HHHHHhCCeeeEEECCCC--CCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeC
Confidence            999999999999999854  35678999999999999999999999999999997754

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=5.4e-89  Score=715.32  Aligned_cols=438  Identities=28%  Similarity=0.441  Sum_probs=406.2

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHh-----hhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTF-----ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE   78 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e   78 (487)
                      +.+.+++++..+.+|+++++++|++||     +.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|
T Consensus        32 t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~e  110 (503)
T PLN02467         32 TEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAA-WD  110 (503)
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence            467899999999999999999999999     899999999999999999999999999999999999999999998 79


Q ss_pred             HHHHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCC
Q 011397           79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVA  152 (487)
Q Consensus        79 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~  152 (487)
                      +..+++.+++++...+++.................+++++|+|||++|+|||||+.      ++||++||+||+|||+.+
T Consensus       111 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~t  190 (503)
T PLN02467        111 MDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELA  190 (503)
T ss_pred             HHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence            99999999999988876643221111111112346789999999999999999998      799999999999999999


Q ss_pred             hHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEc
Q 011397          153 PASSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD  229 (487)
Q Consensus       153 ~~~~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~  229 (487)
                      |.++..+++++.++ +|+|++|+|+| +.+.++.|+.|+ +|.|.||||+.+|+.|++.++.++||+++|+|||||+||+
T Consensus       191 p~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~~~iV~  270 (503)
T PLN02467        191 SVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVF  270 (503)
T ss_pred             cHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhccCCcEEEECCCCCceEEC
Confidence            99999999999998 99999999999 567789999997 9999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 011397          230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLL  308 (487)
Q Consensus       230 ~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i  308 (487)
                      +|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.+++
T Consensus       271 ~dADl~~A~~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v  349 (503)
T PLN02467        271 DDVDLDKAVEWAMFGCF-WTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFI  349 (503)
T ss_pred             CCCCHHHHHHHHHHHHH-hhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999998 89999999999999999999


Q ss_pred             HHHHc-CCeEeeCCccC---CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 011397          309 DDDKV-SGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN  384 (487)
Q Consensus       309 ~~a~~-~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d  384 (487)
                      ++++. ++++++||...   ..|+|+.|||+.++++++++++||+||||++|++|+|.+|||+++|++++||+++|||+|
T Consensus       350 ~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d  429 (503)
T PLN02467        350 STAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISND  429 (503)
T ss_pred             HHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCC
Confidence            99875 67999998753   258999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       385 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      .+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|++...
T Consensus       430 ~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~  488 (503)
T PLN02467        430 LERCERVSEAFQAGIVWINCSQP--CFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKY  488 (503)
T ss_pred             HHHHHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhCeEEEEEe
Confidence            99999999999999999998653  456899999999999999999999999999999885

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=3.5e-89  Score=716.75  Aligned_cols=438  Identities=23%  Similarity=0.341  Sum_probs=402.2

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhh-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.|.+++++.++.+|+++++++|++||+. |+.+|.++|.++|++++++|+++.++|++++++|+|||..++...|+..+
T Consensus        23 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~  102 (481)
T TIGR03216        23 DGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRG  102 (481)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHH
Confidence            46789999999999999999999999997 99999999999999999999999999999999999999999874699999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.++++++.+................+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~  182 (481)
T TIGR03216       103 AANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTA  182 (481)
T ss_pred             HHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence            9999999888765422111100000112345688999999999999999987      7999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeC-Ch-HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEG-AV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g-~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      .++.+++.++ +|+|++|+++| +. +.+..|+.|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus       183 ~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~aa~~~~~~~lElgG~n~~iV~~da  262 (481)
T TIGR03216       183 TLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELGGKNAAIVFADC  262 (481)
T ss_pred             HHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCC
Confidence            9999999998 99999999998 44 3677888886 9999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |+|.|++.+++++| .|+||.|+++++||||++++|+|+++|.++++++++|+|.+ ++++||++++.+++++.++++++
T Consensus       263 dl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a  341 (481)
T TIGR03216       263 DFDAAVAGILRSAF-LNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALA  341 (481)
T ss_pred             CHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999998 89999999999999999999998


Q ss_pred             Hc-CCeEeeCCccC------CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 011397          312 KV-SGKIVHGGERD------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN  384 (487)
Q Consensus       312 ~~-~~~~~~gg~~~------~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d  384 (487)
                      .+ ++++++||..+      .+|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|
T Consensus       342 ~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d  421 (481)
T TIGR03216       342 VEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTED  421 (481)
T ss_pred             HHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCC
Confidence            75 67999998753      258999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       385 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      .+.++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|.+
T Consensus       422 ~~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~  479 (481)
T TIGR03216       422 LSRAHRVARQMEVGIVWVNSWFL--RDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCI  479 (481)
T ss_pred             HHHHHHHHHhcCccEEEECCCCC--CCCCCCcCCcccCcCCcCchHHHHHHhhceEEEEE
Confidence            99999999999999999998664  35789999999999999999999999999999865

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=3e-89  Score=715.99  Aligned_cols=435  Identities=26%  Similarity=0.379  Sum_probs=404.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..++
T Consensus        25 t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~  104 (480)
T cd07559          25 NGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAI  104 (480)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999756999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+........    ....+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       105 ~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~  180 (480)
T cd07559         105 DHFRYFAGVIRAQEGSLS----EIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSIL  180 (480)
T ss_pred             HHHHHHHHHHHHhcCccc----cCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHH
Confidence            999999887765422111    11123356788999999999999999998      79999999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC---
Q 011397          158 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI---  232 (487)
Q Consensus       158 ~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da---  232 (487)
                      .+++++.+++|+|++|+|+| +.+.++.|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++||   
T Consensus       181 ~l~~l~~~~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~p~~lElGGk~p~iV~~dA~~~  260 (480)
T cd07559         181 VLMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSPNIFFDDAMDA  260 (480)
T ss_pred             HHHHHHHHhCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeccCCCCeEEEcCCcccc
Confidence            99999999999999999999 567889999996 9999999999999999999999999999999999999999999   


Q ss_pred             --CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          233 --NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       233 --Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                        |++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++++
T Consensus       261 ~~Dl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~  339 (480)
T cd07559         261 DDDFDDKAEEGQLGFA-FNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVD  339 (480)
T ss_pred             ccCHHHHHHHHHHHHH-hhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHH
Confidence              99999999999999 99999999999999999999999999999999999999998 899999999999999999999


Q ss_pred             HHHc-CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecC
Q 011397          310 DDKV-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN  383 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~  383 (487)
                      ++.. ++++++||...     ..|+|+.|||+.+++++|.+++||+||||++|++|+|.+|||+++|++++||+++|||+
T Consensus       340 ~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~  419 (480)
T cd07559         340 IGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTR  419 (480)
T ss_pred             HHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECC
Confidence            9875 67999999764     35899999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          384 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       384 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      |.+++.++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|+..
T Consensus       420 d~~~a~~~a~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~  479 (480)
T cd07559         420 DINRALRVARGIQTGRVWVNCYHQ--YPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVS  479 (480)
T ss_pred             CHHHHHHHHHhcCcceEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence            999999999999999999997543  457899999999999999999999999999998753

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=4.5e-89  Score=715.27  Aligned_cols=436  Identities=18%  Similarity=0.234  Sum_probs=399.4

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|+++++.|+|||..++. .|+..++
T Consensus        43 t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~~a~-~ev~~~i  121 (508)
T PLN02315         43 NNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEII  121 (508)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            457899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++..+.+.+.... .  .......+..++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       122 ~~~~~~~~~~~~l~~~~~~-~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~  198 (508)
T PLN02315        122 DMCDFAVGLSRQLNGSIIP-S--ERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI  198 (508)
T ss_pred             HHHHHHHHHHHHhcCcccc-C--CCCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHH
Confidence            9999998877654321111 0  0112344678899999999999999986      89999999999999999999988


Q ss_pred             H----HHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397          158 L----LAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       158 ~----l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      .    +.+++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus       199 ~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~d  278 (508)
T PLN02315        199 AMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDD  278 (508)
T ss_pred             HHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCC
Confidence            7    56677887 99999999998767889999996 999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||+|.|++.+++++| .|+||.|+++++||||+++||+|+++|+++++++++|||.+ .+++||+++..+.+++.+++++
T Consensus       279 ADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~  357 (508)
T PLN02315        279 ADIQLAVRSVLFAAV-GTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEI  357 (508)
T ss_pred             CCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999998 7999999999999999999999


Q ss_pred             HHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          311 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       311 a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      +++ ++++++||... .+|+|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus       358 a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a  436 (508)
T PLN02315        358 IKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETI  436 (508)
T ss_pred             HHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHH
Confidence            975 78999999753 36899999999 5999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH--hcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          389 QQFVE--TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       389 ~~~~~--~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++  ++++|.|+||+... ...+.+||||+|.||+|+++|.+++++||+.|+|+...
T Consensus       437 ~~~~~~~~l~~G~v~iN~~~~-~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~  495 (508)
T PLN02315        437 FKWIGPLGSDCGIVNVNIPTN-GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY  495 (508)
T ss_pred             HHHhhhcccceeEEEEcCCCC-CCCCCCCCCccccccCCccchHHHHHHHhhEEEEEEec
Confidence            99985  79999999998543 23567899999999999999999999999999987753

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=4.1e-89  Score=710.66  Aligned_cols=431  Identities=25%  Similarity=0.393  Sum_probs=400.5

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      .+.|++++++.++.++++.++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus         5 ~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~   83 (448)
T TIGR01780         5 ATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK-GEILYA   83 (448)
T ss_pred             CCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence            3578899999999999999999999999999999999999999999999999999999999999999999998 899999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.+++++....++.......   ...+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~  160 (448)
T TIGR01780        84 ASFLEWFAEEAKRVYGDTIPS---PQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA  160 (448)
T ss_pred             HHHHHHHHHHHHHhcCccccC---CCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence            999999987766543221110   1122355678899999999999999998      8999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeCC--hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEGA--VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g~--~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      ..+++++.++ +|+|++|+|+|+  .+.++.|++|+ +|.|+||||+.+|+.|++.++.++||+++|+|||||+||++||
T Consensus       161 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~da  240 (448)
T TIGR01780       161 LALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA  240 (448)
T ss_pred             HHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCC
Confidence            9999999998 999999999985  56788999996 9999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |+|.|++.+++++| +|+||.|+++++||||++++|+|+++|.++++++++|+|.+ ++++||++++.+++++.++++++
T Consensus       241 dl~~aa~~iv~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a  319 (448)
T TIGR01780       241 DIDQAVEGAMASKF-RNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADA  319 (448)
T ss_pred             CHHHHHHHHHHHHH-HhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999988 89999999999999999999998


Q ss_pred             Hc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          312 KV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       312 ~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                      ++ ++++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++
T Consensus       320 ~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~  399 (448)
T TIGR01780       320 VEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIW  399 (448)
T ss_pred             HHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHH
Confidence            74 67999999754 35899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  440 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k  440 (487)
                      ++++++++|.|+||+...  ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus       400 ~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k  448 (448)
T TIGR01780       400 RVAEALEYGMVGINTGLI--SNVVAPFGGVKQSGLGREGSKYGIEEYLETK  448 (448)
T ss_pred             HHHHhCCccEEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence            999999999999999654  4567999999999999999999999999875

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-89  Score=715.31  Aligned_cols=436  Identities=25%  Similarity=0.362  Sum_probs=404.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++..|+..++
T Consensus        31 tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~  110 (488)
T PRK13252         31 TGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGA  110 (488)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999756999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++....... ....  . ......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       111 ~~l~~~~~~~~~~~g-~~~~--~-~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~  186 (488)
T PRK13252        111 DVLEYYAGLAPALEG-EQIP--L-RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTAL  186 (488)
T ss_pred             HHHHHHHHHHHHhcC-ceec--c-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHH
Confidence            999999887654321 1111  0 122356788999999999999999998      79999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      .+++++.++ +|+|+||+|+|+.+.++.|+.|+ +|.|+||||+++|+.|.+.++.+++|+++|+|||||+||++|||++
T Consensus       187 ~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~l~~~~lElgG~~p~iV~~dAdl~  266 (488)
T PRK13252        187 KLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIVFDDADLD  266 (488)
T ss_pred             HHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEEcCCCCeeEECCCCCHH
Confidence            999999998 99999999999666888999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++.. 
T Consensus       267 ~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~  345 (488)
T PRK13252        267 RAADIAMLANF-YSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAE  345 (488)
T ss_pred             HHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHC
Confidence            99999999999 99999999999999999999999999999999999999988 8999999999999999999999864 


Q ss_pred             CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          314 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       314 ~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      ++++++||...     .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.+
T Consensus       346 Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~  425 (488)
T PRK13252        346 GARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRA  425 (488)
T ss_pred             CCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHH
Confidence            67999998642     2589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+|+++||+.|+|....
T Consensus       426 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~  481 (488)
T PRK13252        426 HRVIHQLEAGICWINTWGE--SPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM  481 (488)
T ss_pred             HHHHHhcCccEEEECCCCC--CCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeC
Confidence            9999999999999998543  4578999999999999999999999999999998753

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=7.1e-89  Score=710.85  Aligned_cols=434  Identities=24%  Similarity=0.337  Sum_probs=402.7

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      .+.|.+++++..+.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus         5 ~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~   83 (456)
T cd07107           5 ATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-GDVMVA   83 (456)
T ss_pred             CCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHH
Confidence            3568899999999999999999999999999999999999999999999999999999999999999999998 899999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.++++++.... ..+.....   ......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        84 ~~~l~~~a~~~~~-~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~  159 (456)
T cd07107          84 AALLDYFAGLVTE-LKGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA  159 (456)
T ss_pred             HHHHHHHHHHHHH-hCCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence            9999999876543 33322111   112356788999999999999999997      7999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          157 SLLAKLVGEYMDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       157 ~~l~~~l~~alP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .++++++.+++|+|++|+++|+ .+.++.|++|+ +|.|.||||+++|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       160 ~~l~~~~~~~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dadl  239 (456)
T cd07107         160 LRLAELAREVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDADP  239 (456)
T ss_pred             HHHHHHHHHhCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCCH
Confidence            9999999999999999999984 45789999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHh-cccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          235 KVACRRMIMGK-WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       235 ~~aa~~i~~~~-~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      |.|++.+++++ | .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++.
T Consensus       240 ~~Aa~~i~~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~  318 (456)
T cd07107         240 EAAADAAVAGMNF-TWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAK  318 (456)
T ss_pred             HHHHHHHHHhchh-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHH
Confidence            99999999995 8 89999999999999999999999999999999999999988 899999999999999999999986


Q ss_pred             c-CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          313 V-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       313 ~-~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      + ++++++||...     ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+
T Consensus       319 ~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~  398 (456)
T cd07107         319 REGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDIS  398 (456)
T ss_pred             HCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHH
Confidence            5 67999999653     25899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      +++++++++++|+|+||++..  ..+.+||||+|+||+|+++|++|+++|++.|+|.+
T Consensus       399 ~~~~~~~~l~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~  454 (456)
T cd07107         399 QAHRTARRVEAGYVWINGSSR--HFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNV  454 (456)
T ss_pred             HHHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHhhceEEEEE
Confidence            999999999999999999764  35789999999999999999999999999999865

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-89  Score=713.66  Aligned_cols=437  Identities=22%  Similarity=0.346  Sum_probs=406.3

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..++
T Consensus        26 t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~  105 (475)
T PRK13473         26 TGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIV  105 (475)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999999999999999999999999999999988646999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++...+.+.......   ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       106 ~~~~~~a~~~~~~~g~~~~~---~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~  182 (475)
T PRK13473        106 DVFRFFAGAARCLEGKAAGE---YLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTAL  182 (475)
T ss_pred             HHHHHHHHHHHHhcCccccc---CCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence            99999987766543221111   0112346788999999999999999998      79999999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      .+.+++.+++|+|++|+++| +.+.+..|+.|+ +|.|+||||+++|+.|.+.++++++|+++|+|||||+||++|||+|
T Consensus       183 ~l~~~~~~alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dADld  262 (475)
T PRK13473        183 KLAELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKRTHLELGGKAPVIVFDDADLD  262 (475)
T ss_pred             HHHHHHHHhCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCHH
Confidence            99999999999999999999 678899999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.. 
T Consensus       263 ~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~  341 (475)
T PRK13473        263 AVVEGIRTFGY-YNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKAL  341 (475)
T ss_pred             HHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence            99999999999 99999999999999999999999999999999999999998 8999999999999999999999875 


Q ss_pred             C-CeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 S-GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 ~-~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      + +++++||... ..|+|+.|||+.++++++.+++||+||||++|++|+|.+|||+++|++++||+++|||+|.+.++++
T Consensus       342 G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~  421 (475)
T PRK13473        342 GHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRV  421 (475)
T ss_pred             CCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence            4 7999999864 3588999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++||+.|++++.|
T Consensus       422 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~  474 (475)
T PRK13473        422 SARLQYGCTWVNTHFM--LVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH  474 (475)
T ss_pred             HHhCCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence            9999999999999764  3577999999999999999999999999999998765

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=9.4e-89  Score=710.41  Aligned_cols=437  Identities=28%  Similarity=0.441  Sum_probs=405.5

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      ++.+.+++++..+.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..++. .|+..+
T Consensus         5 ~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~   83 (456)
T cd07110           5 ATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAA-WDVDDV   83 (456)
T ss_pred             CCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence            3578899999999999999999999999999999999999999999999999999999999999999999998 799999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.++++++.++.+.................+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~  163 (456)
T cd07110          84 AGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTE  163 (456)
T ss_pred             HHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHH
Confidence            9999999988877632111111111123356789999999999999999988      7999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      ..+.+++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.||||+++|+.|++.++++++|+++|+|||||+||++|||
T Consensus       164 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~dad  243 (456)
T cd07110         164 LELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDAD  243 (456)
T ss_pred             HHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECCCCC
Confidence            9999999998 99999999999 456789999997 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      ++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++.
T Consensus       244 l~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~  322 (456)
T cd07110         244 LEKAVEWAMFGCF-WNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGK  322 (456)
T ss_pred             HHHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999999 899999999999999999999987


Q ss_pred             c-CCeEeeCCccC---CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          313 V-SGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       313 ~-~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      . ++++++||..+   ..|+|+.|||+.+++++|+++++|+||||++|++|+|.+|||+++|++++||+++|||+|.+.+
T Consensus       323 ~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~  402 (456)
T cd07110         323 EEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERC  402 (456)
T ss_pred             hCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence            5 67999998764   3588999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +++++++++|+|+||++..  ..+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus       403 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  455 (456)
T cd07110         403 DRVAEALEAGIVWINCSQP--CFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT  455 (456)
T ss_pred             HHHHHhCCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence            9999999999999998643  4678999999999999999999999999999975

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=1.2e-88  Score=709.93  Aligned_cols=438  Identities=30%  Similarity=0.472  Sum_probs=410.3

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+++++++..+.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus         5 t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ev~~~~   83 (453)
T cd07099           5 TGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-LEVLLAL   83 (453)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            468899999999999999999999999999999999999999999999999999999999999999999887 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+.++.+.+.........+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~  163 (453)
T cd07099          84 EAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGE  163 (453)
T ss_pred             HHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence            999999998887765433221111223467889999999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV  236 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~  236 (487)
                      .+.+++.++ +|+|++|+++|+.+.+..|++|++|.|+||||+++|+.|.+.++++++|+++|+|||||+||++|||++.
T Consensus       164 ~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dadl~~  243 (453)
T cd07099         164 LLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADADLER  243 (453)
T ss_pred             HHHHHHHHcCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCCCHHH
Confidence            999999998 9999999999966788889988899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-C
Q 011397          237 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-S  314 (487)
Q Consensus       237 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~  314 (487)
                      |++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++.+ +
T Consensus       244 a~~~i~~~~~-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~g  322 (453)
T cd07099         244 AAAAAVWGAM-VNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKG  322 (453)
T ss_pred             HHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCC
Confidence            9999999999 99999999999999999999999999999999999999988 8999999999999999999999864 6


Q ss_pred             CeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHH
Q 011397          315 GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE  393 (487)
Q Consensus       315 ~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~  393 (487)
                      +++++||... .+|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|++++||++||||+|.+.++++++
T Consensus       323 a~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~  402 (453)
T cd07099         323 AKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIAR  402 (453)
T ss_pred             CEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHH
Confidence            7999999765 468999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          394 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       394 ~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++++|.|+||+.+.+...+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus       403 ~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~  452 (453)
T cd07099         403 RLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA  452 (453)
T ss_pred             hCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence            99999999999876666789999999999999999999999999999985

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=1.1e-88  Score=717.22  Aligned_cols=436  Identities=23%  Similarity=0.356  Sum_probs=408.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.++++++++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus        56 ~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~i  134 (512)
T cd07124          56 PSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEAD-ADVAEAI  134 (512)
T ss_pred             CCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHHH-HHHHHHH
Confidence            478999999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+.++. ......   ..+.....+++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       135 ~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~  210 (512)
T cd07124         135 DFLEYYAREMLRLR-GFPVEM---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAA  210 (512)
T ss_pred             HHHHHHHHHHHHhc-CccccC---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHH
Confidence            99999999888772 222111   123467889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc------cccceeeecCCCCcEEE
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK------HLTPVLLELGGKSPVVF  228 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~------~~~p~~~e~gG~~p~iV  228 (487)
                      .+.+++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.+++      +++|+++|+|||||+||
T Consensus       211 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV  290 (512)
T cd07124         211 KLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIV  290 (512)
T ss_pred             HHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEE
Confidence            999999998 99999999998 556789999997 9999999999999999998886      68999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 011397          229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKL  307 (487)
Q Consensus       229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~  307 (487)
                      ++|||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ .+++||++++.+.+++.++
T Consensus       291 ~~daDl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~  369 (512)
T cd07124         291 DEDADLDEAAEGIVRSAF-GFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRY  369 (512)
T ss_pred             CCCCCHHHHHHHHHHHHH-hhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence            999999999999999999 99999999999999999999999999999999999999998 7999999999999999999


Q ss_pred             HHHHHcCCeEeeCCccCC---CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 011397          308 LDDDKVSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN  384 (487)
Q Consensus       308 i~~a~~~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d  384 (487)
                      |+++..++++++||..++   +|+|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|
T Consensus       370 i~~a~~g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d  449 (512)
T cd07124         370 IEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRS  449 (512)
T ss_pred             HHHHHhCCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCC
Confidence            999988889999997654   58999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 011397          385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       385 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~  445 (487)
                      .+.++++++++++|+|+||+.+.+...+.+||||+|.||+| +++|.+|+++||+.|+|.+.
T Consensus       450 ~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~  511 (512)
T cd07124         450 PEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTEN  511 (512)
T ss_pred             HHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEe
Confidence            99999999999999999999776555677999999999999 78899999999999998764

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=1.1e-88  Score=714.89  Aligned_cols=435  Identities=24%  Similarity=0.378  Sum_probs=405.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++..+.+|+++++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus        25 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~  103 (488)
T TIGR02299        25 TNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTR-QQVIRAA  103 (488)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHH
Confidence            457889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+.++..+.....    .....+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~  179 (488)
T TIGR02299       104 ENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAA  179 (488)
T ss_pred             HHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHH
Confidence            999999988775543332211    12356788999999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++.+++.++ +|+|++|+++| +.+.++.|+.|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       180 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~~~~lElGGknp~iV~~dAdl  259 (488)
T TIGR02299       180 RLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFDDADL  259 (488)
T ss_pred             HHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCCH
Confidence            999999998 99999999998 567788899997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ .+.+||++++.+.+++.++++++.+
T Consensus       260 ~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~  338 (488)
T TIGR02299       260 ERALDAVVFMIF-SFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEK  338 (488)
T ss_pred             HHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence            999999999999 99999999999999999999999999999999999999998 8999999999999999999999865


Q ss_pred             -CCeEeeCCccCC--------CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 011397          314 -SGKIVHGGERDK--------NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN  384 (487)
Q Consensus       314 -~~~~~~gg~~~~--------~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d  384 (487)
                       ++++++||...+        +|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|
T Consensus       339 ~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d  418 (488)
T TIGR02299       339 EGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTND  418 (488)
T ss_pred             CCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence             679999986532        48899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       385 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      .+.++++++++++|+|+||+...  ..+.+||||+|.||+|+++|.+|+++|++.|+|+...
T Consensus       419 ~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~  478 (488)
T TIGR02299       419 VGRAHRVALALEAGMIWVNSQNV--RHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALAL  478 (488)
T ss_pred             HHHHHHHHHhCCcCeEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEec
Confidence            99999999999999999998654  4567999999999999999999999999999998754

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=1.4e-88  Score=708.24  Aligned_cols=436  Identities=22%  Similarity=0.373  Sum_probs=404.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus         5 tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~   83 (454)
T cd07101           5 TGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-EEVLDVA   83 (454)
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHH
Confidence            567889999999999999999999999999999999999999999999999999999999999999999997 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++..+.++..+....... ......+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~  162 (454)
T cd07101          84 IVARYYARRAERLLKPRRRRGAI-PVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTAL  162 (454)
T ss_pred             HHHHHHHHHHHHHhCCccccccC-CCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence            99999999988876544322111 112366889999999999999999977      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      .+.+++.++ +|+|++|+++| +.+.+..|++| +|.|.||||+++|+.|++.++++++|+++|+|||||+||++|||++
T Consensus       163 ~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~-~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dAdl~  241 (454)
T cd07101         163 WAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN-ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDADLD  241 (454)
T ss_pred             HHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCCCHH
Confidence            999999998 99999999999 56678888876 6999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.. 
T Consensus       242 ~a~~~i~~~~~-~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~  320 (454)
T cd07101         242 KAAAGAVRACF-SNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAK  320 (454)
T ss_pred             HHHHHHHHHHH-hcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHC
Confidence            99999999999 99999999999999999999999999999999999999988 8999999999999999999999874 


Q ss_pred             CCeEeeCCccCC--CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 SGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 ~~~~~~gg~~~~--~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      ++++++||...+  +|+|+.|||+.++++++.+++||+||||++|++|+|.+|||+++|++++||++||||+|.+.++++
T Consensus       321 Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~  400 (454)
T cd07101         321 GATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRI  400 (454)
T ss_pred             CCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence            679999986432  478999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccc-cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          392 VETVSAGGLVINDTAVH-LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~-~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++++++|.|+||++..+ ...+.+||||+|.||+|+++|.+|+++|++.|+|.
T Consensus       401 ~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~  453 (454)
T cd07101         401 AARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA  453 (454)
T ss_pred             HHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence            99999999999996542 34577999999999999999999999999999875

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=1.2e-88  Score=716.05  Aligned_cols=437  Identities=22%  Similarity=0.346  Sum_probs=407.2

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|++++++.|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..++. .|+..++
T Consensus        56 ~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~  134 (511)
T TIGR01237        56 PSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIPEAD-AEVAEAI  134 (511)
T ss_pred             CCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            578899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.++++.+....   ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       135 ~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~  211 (511)
T TIGR01237       135 DFCEYYAREMERLAGQGVN---LDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAA  211 (511)
T ss_pred             HHHHHHHHHHHHhcCcccc---CCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence            9999999988877542211   11123456788999999999999999988      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh------ccccceeeecCCCCcEEE
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF  228 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~------~~~~p~~~e~gG~~p~iV  228 (487)
                      .+++++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|.||||+++|+.|++.++      ++++|+++|+|||||+||
T Consensus       212 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV  291 (511)
T TIGR01237       212 KIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIV  291 (511)
T ss_pred             HHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEE
Confidence            999999998 99999999999 567899999997 999999999999999999887      588999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 011397          229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKL  307 (487)
Q Consensus       229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~  307 (487)
                      ++|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++
T Consensus       292 ~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~  370 (511)
T TIGR01237       292 DESADIEQAVAGAVYSAF-GFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEY  370 (511)
T ss_pred             CCCCCHHHHHHHHHHHHH-hcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHH
Confidence            999999999999999999 99999999999999999999999999999999999999998 8999999999999999999


Q ss_pred             HHHHHcCCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          308 LDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       308 i~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      ++++.+.+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus       371 i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~  450 (511)
T TIGR01237       371 IEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRD  450 (511)
T ss_pred             HHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence            999887678999886543 5899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEe
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~-~~g~~~l~~~~~~k~v~~~  445 (487)
                      .++++++++++|+|+||+++.+...+.+||||+|.||+|+ .+|.+++++|++.|+|..+
T Consensus       451 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~  510 (511)
T TIGR01237       451 HIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTEN  510 (511)
T ss_pred             HHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEe
Confidence            9999999999999999998765555678999999999995 7899999999999998765

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=1.4e-88  Score=711.23  Aligned_cols=433  Identities=27%  Similarity=0.393  Sum_probs=400.9

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhh--CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.|.+++++.++.+|+++++++|++||+.  |+.++.++|.++|++++++|++++++|++++++|+|||..+++..|+..
T Consensus        28 t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~  107 (476)
T cd07142          28 NGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPL  107 (476)
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence            47889999999999999999999999975  9999999999999999999999999999999999999999987569999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.+++++...+...... .   ........+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       108 ~~~~l~~~a~~~~~~~g~~-~---~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~  183 (476)
T cd07142         108 AARLFRYYAGWADKIHGMT-L---PADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLS  183 (476)
T ss_pred             HHHHHHHHHHHHHHhcCcc-c---ccCCCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHH
Confidence            9999999987655432211 1   11112345788999999999999999998      799999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc-cccceeeecCCCCcEEEcCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~-~~~p~~~e~gG~~p~iV~~d  231 (487)
                      +..+++++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|+||||+++|+.|++.+++ +++|+++|+|||||+||++|
T Consensus       184 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~d  263 (476)
T cd07142         184 ALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCED  263 (476)
T ss_pred             HHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECCC
Confidence            99999999998 99999999999 455788999996 9999999999999999999997 89999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||+|.|++.+++++| +|+||.|+++++||||++++|+|+++|++++.++++|||.+ ++++||++++.+++++.+++++
T Consensus       264 ADl~~Aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~  342 (476)
T cd07142         264 ADVDKAVELAHFALF-FNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEH  342 (476)
T ss_pred             CCHHHHHHHHHHHHh-cCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999988 8999999999999999999999


Q ss_pred             HHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          311 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       311 a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      +.+ ++++++||... .+|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.+
T Consensus       343 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a  422 (476)
T cd07142         343 GKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTA  422 (476)
T ss_pred             HHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence            865 67999999763 3689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +++++++++|+|+||++.  ...+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus       423 ~~~~~~l~~G~v~iN~~~--~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~  475 (476)
T cd07142         423 NTLSRALKAGTVWVNCYD--VFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV  475 (476)
T ss_pred             HHHHHhCCcceEEECCCC--CCCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence            999999999999999854  35678999999999999999999999999999875

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=1.6e-88  Score=711.21  Aligned_cols=436  Identities=21%  Similarity=0.309  Sum_probs=405.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++..+.+++++++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus        22 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  100 (478)
T cd07086          22 NGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMI  100 (478)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence            457899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++...+.+..... ..  .......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       101 ~~~~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~  177 (478)
T cd07086         101 DICDYAVGLSRMLYGLTI-PS--ERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAI  177 (478)
T ss_pred             HHHHHHHHHHHHhcCccc-cc--CCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHH
Confidence            999999888766532111 11  1112356788999999999999999996      89999999999999999999999


Q ss_pred             HHHHHHhhh-----cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397          158 LLAKLVGEY-----MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       158 ~l~~~l~~a-----lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      .+++++.++     +|+|++|+|+|+.+.+..|..|+ +|.|.||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus       178 ~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~p~iV~~d  257 (478)
T cd07086         178 AVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNAIIVMDD  257 (478)
T ss_pred             HHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEeecCCCCcEEEcCC
Confidence            999999887     99999999999666788888887 999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.+++++
T Consensus       258 Adl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~  336 (478)
T cd07086         258 ADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEI  336 (478)
T ss_pred             CCHHHHHHHHHHHHH-hccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999988 7999999999999999999999


Q ss_pred             HHc-CCeEeeCCccCC---CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          311 DKV-SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       311 a~~-~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      +.+ ++++++||....   +|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus       337 a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~  416 (478)
T cd07086         337 AKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLR  416 (478)
T ss_pred             HHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHH
Confidence            975 779999997644   5889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHh--cceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          387 LKQQFVET--VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       387 ~~~~~~~~--~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      .+++++++  +++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus       417 ~a~~~~~~~~~~~G~v~iN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07086         417 EAFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN  476 (478)
T ss_pred             HHHHHHhcCcccceeEEECCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence            99999999  99999999997654 457899999999999999999999999999998764

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=1.4e-88  Score=711.20  Aligned_cols=434  Identities=26%  Similarity=0.397  Sum_probs=404.3

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus        24 ~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  102 (473)
T cd07097          24 TSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKTLPEAR-GEVTRAG  102 (473)
T ss_pred             CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++.....+......   ....+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       103 ~~l~~~a~~~~~~~g~~~~---~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~  179 (473)
T cd07097         103 QIFRYYAGEALRLSGETLP---STRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAW  179 (473)
T ss_pred             HHHHHHHHHHHHhcCcccc---cCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHH
Confidence            9999999877765432211   11123356889999999999999999987      79999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++.+++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       180 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dadl  259 (473)
T cd07097         180 ALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPLVVLDDADL  259 (473)
T ss_pred             HHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEECCCCCeeEECCCCCH
Confidence            999999998 999999999994 56789999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++++.+++++++.
T Consensus       260 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~  338 (473)
T cd07097         260 DLAVECAVQGAF-FSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARS  338 (473)
T ss_pred             HHHHHHHHHHHH-hccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999999874


Q ss_pred             -CCeEeeCCccCC---CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          314 -SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       314 -~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                       ++++++||...+   .|+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++
T Consensus       339 ~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~  418 (473)
T cd07097         339 EGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHAT  418 (473)
T ss_pred             CCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHH
Confidence             789999997532   4789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEE
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~  443 (487)
                      ++++++++|+|+||+++.+ ..+.+||||+|.||+| +++|.+|+++|++.|+|.
T Consensus       419 ~~~~~l~~g~v~iN~~~~~-~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~  472 (473)
T cd07097         419 HFKRRVEAGVVMVNLPTAG-VDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY  472 (473)
T ss_pred             HHHHhCCcCeEEECCCCCC-CCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence            9999999999999986543 3468999999999999 899999999999999985

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=1.6e-88  Score=706.79  Aligned_cols=430  Identities=24%  Similarity=0.389  Sum_probs=402.1

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus         6 tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~   84 (446)
T cd07106           6 TGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQ-FEVGGAV   84 (446)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            567899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++...   ......   ...+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        85 ~~l~~~~~~~~---~~~~~~---~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~  158 (446)
T cd07106          85 AWLRYTASLDL---PDEVIE---DDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTL  158 (446)
T ss_pred             HHHHHHHhhhh---cCcccc---CCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence            99998876542   111110   1123466889999999999999999988      89999999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHH
Q 011397          158 LLAKLVGEYMDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV  236 (487)
Q Consensus       158 ~l~~~l~~alP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~  236 (487)
                      ++++++.+++|+|++|+++|+.+.+..|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||+|.
T Consensus       159 ~l~~~~~~~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dADl~~  238 (446)
T cd07106         159 KLGELAQEVLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDIDA  238 (446)
T ss_pred             HHHHHHHHhCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCCHHH
Confidence            99999999999999999999777888999997 99999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-C
Q 011397          237 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-S  314 (487)
Q Consensus       237 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~  314 (487)
                      |++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.. +
T Consensus       239 aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~g  317 (446)
T cd07106         239 VAPKLFWGAF-INSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKG  317 (446)
T ss_pred             HHHHHHHHHH-HhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
Confidence            9999999999 99999999999999999999999999999999999999998 8999999999999999999999874 7


Q ss_pred             CeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHH
Q 011397          315 GKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE  393 (487)
Q Consensus       315 ~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~  393 (487)
                      +++++||...+ .|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|++++||++||||+|.+.++++++
T Consensus       318 a~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~  397 (446)
T cd07106         318 AKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVAR  397 (446)
T ss_pred             CEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence            89999997643 58899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          394 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       394 ~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++++|+|+||+++.  ..+.+||||+|.||+|+++|.+|+++||+.|+|.
T Consensus       398 ~~~~G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~  445 (446)
T cd07106         398 RLEAGTVWINTHGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN  445 (446)
T ss_pred             hCCccEEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence            99999999999763  4688999999999999999999999999999875

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=1.9e-88  Score=711.17  Aligned_cols=436  Identities=24%  Similarity=0.322  Sum_probs=403.2

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|++.++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus        25 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~  103 (478)
T cd07085          25 TGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGL  103 (478)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++..... ..++....  ...+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       104 ~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~  180 (478)
T cd07085         104 EVVEFACSIPHL-LKGEYLEN--VARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAM  180 (478)
T ss_pred             HHHHHHHHHHHH-hCCeeccc--CCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHH
Confidence            999998865543 22222111  0112356889999999999999999986      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      .+.+++.++ +|+|++|+++|+.+.+..|++|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++|||++
T Consensus       181 ~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~  260 (478)
T cd07085         181 RLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVVMPDADLE  260 (478)
T ss_pred             HHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCcEEecCCCCCceEECCCCCHH
Confidence            999999998 99999999999777889999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.+ 
T Consensus       261 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~  339 (478)
T cd07085         261 QTANALVGAAF-GAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEE  339 (478)
T ss_pred             HHHHHHHHHHH-hcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC
Confidence            99999999999 99999999999999999999999999999999999999988 8999999999999999999999864 


Q ss_pred             CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          314 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       314 ~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      ++++++||...     .+|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+
T Consensus       340 Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~  419 (478)
T cd07085         340 GAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAA  419 (478)
T ss_pred             CCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence            77999998642     3589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEe
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g--~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +++++++++|.|+||++. ....+.+||||+|.||+|  +++|.+++++|++.|+|+..
T Consensus       420 ~~~~~~l~~G~v~iN~~~-~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~  477 (478)
T cd07085         420 RKFQREVDAGMVGINVPI-PVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR  477 (478)
T ss_pred             HHHHHhCCcceEEEcCCC-CCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence            999999999999999864 334577999999999999  47899999999999998764

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=2.4e-88  Score=705.76  Aligned_cols=435  Identities=23%  Similarity=0.360  Sum_probs=401.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhh-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.|.+++++.++.+|+++++++|++||+. |+.+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+
T Consensus         8 t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~   86 (455)
T cd07148           8 DLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAK-VEVTRA   86 (455)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence            46689999999999999999999999997 5679999999999999999999999999999999999999998 799999


Q ss_pred             HHHHHHHHHHHhhhhcCCcccccc-ccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      ++.++++++.+..+.......... .......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus        87 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~  166 (455)
T cd07148          87 IDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLS  166 (455)
T ss_pred             HHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHH
Confidence            999999999988775432211100 0112356789999999999999999997      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      +.++++++.++ +|+|++|+++|+.+.++.|+.|+ +|.|.||||+++|+.|++.++. .+|+++|+|||||+||++|||
T Consensus       167 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~iV~~dAD  245 (455)
T cd07148         167 CLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVIVDRSAD  245 (455)
T ss_pred             HHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceEECCCCC
Confidence            99999999998 99999999999777889999996 9999999999999999998876 499999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      +|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++++
T Consensus       246 l~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~  324 (455)
T cd07148         246 LDAMIPPLVKGGF-YHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAV  324 (455)
T ss_pred             HHHHHHHHHHHHH-hcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999998 899999999999999999999987


Q ss_pred             c-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          313 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       313 ~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      . ++++++||... +++|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.+.++
T Consensus       325 ~~Ga~vl~gg~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~  403 (455)
T cd07148         325 AAGARLLCGGKRL-SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKA  403 (455)
T ss_pred             hCCCEEEeCCccC-CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence            5 67999998764 478999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++++++|+|+||+++. ...+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       404 ~~~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07148         404 VRRLDATAVMVNDHTA-FRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV  454 (455)
T ss_pred             HHHcCcCeEEECCCCC-CCCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence            9999999999998753 34457899999999999999999999999999885

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=2.9e-88  Score=698.43  Aligned_cols=422  Identities=66%  Similarity=1.054  Sum_probs=391.8

Q ss_pred             HHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcCC
Q 011397           21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE  100 (487)
Q Consensus        21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~  100 (487)
                      +++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++...|+..+++.++++++.+..+..+.
T Consensus         3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   82 (432)
T cd07137           3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE   82 (432)
T ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            58899999999999999999999999999999999999999999999999999874699999999999999887766542


Q ss_pred             ccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcEEE
Q 011397          101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV  174 (487)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~~  174 (487)
                      .........+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.++++++.+++|+|++|+
T Consensus        83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~~P~gvv~~  162 (432)
T cd07137          83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKV  162 (432)
T ss_pred             ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEEE
Confidence            2111111123356789999999999999999998      8999999999999999999999999999999999999999


Q ss_pred             EeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhccc-CCCCc
Q 011397          175 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC-NNGQA  253 (487)
Q Consensus       175 v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~-~~Gq~  253 (487)
                      ++|+.+.+..|++|++|.|+||||+++|+.|.+.+++++||+++|+|||||+||++|||++.|++.+++++| . |+||.
T Consensus       163 v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f-~~~~GQ~  241 (432)
T cd07137         163 IEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKW-GCNNGQA  241 (432)
T ss_pred             EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhh-hccCCCc
Confidence            999777888999888999999999999999999999999999999999999999999999999999999998 7 99999


Q ss_pred             cccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceeecE
Q 011397          254 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPT  333 (487)
Q Consensus       254 C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Pt  333 (487)
                      |++++++|||++++|+|+++|+++++++++|||.+.+++||++++.+.+++.++++++..++++++||..+.+|+|+.||
T Consensus       242 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga~~l~gg~~~~~g~~~~Pt  321 (432)
T cd07137         242 CIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYIEPT  321 (432)
T ss_pred             ccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEEeeE
Confidence            99999999999999999999999999999999977899999999999999999999998788999998765568999999


Q ss_pred             EEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCCCC
Q 011397          334 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS  413 (487)
Q Consensus       334 v~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~  413 (487)
                      |+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||++..+...+.
T Consensus       322 vl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~  401 (432)
T cd07137         322 ILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDT  401 (432)
T ss_pred             EEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998765445578


Q ss_pred             CCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          414 LPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       414 ~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +||||+|.||+|+++|.+++++|++.|+|+
T Consensus       402 ~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~  431 (432)
T cd07137         402 LPFGGVGESGFGAYHGKFSFDAFSHKKAVL  431 (432)
T ss_pred             CCCCCcCcCcCCccccHHHHHHhccCceee
Confidence            999999999999999999999999999874

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=2.3e-88  Score=707.44  Aligned_cols=435  Identities=28%  Similarity=0.420  Sum_probs=402.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+|+++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus         8 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~   86 (456)
T cd07145           8 NGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSR-VEVERTI   86 (456)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCcccccc--ccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSI--TTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +.++++++....+ .+.......  .......+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus        87 ~~l~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~  165 (456)
T cd07145          87 RLFKLAAEEAKVL-RGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLT  165 (456)
T ss_pred             HHHHHHHHHHHHh-cCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence            9999999876643 222211110  0012245678999999999999999997      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      +.++.+++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+++|+.|++.++++++|+++|+|||||+||++||
T Consensus       166 ~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~iV~~dA  245 (456)
T cd07145         166 AIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMIVLKDA  245 (456)
T ss_pred             HHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeEECCCC
Confidence            99999999997 99999999999 567788999997 9999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++
T Consensus       246 dl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a  324 (456)
T cd07145         246 DLERAVSIAVRGRF-ENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDA  324 (456)
T ss_pred             CHHHHHHHHHHHHH-hccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999998 89999999999999999999998


Q ss_pred             Hc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 011397          312 KV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ  390 (487)
Q Consensus       312 ~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~  390 (487)
                      .. ++++++||..+ .|+|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.+++
T Consensus       325 ~~~ga~vl~gg~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~  403 (456)
T cd07145         325 VEKGGKILYGGKRD-EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALK  403 (456)
T ss_pred             HHCCCEEEeCCCCC-CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence            64 67999998764 38999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          391 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       391 ~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +++++++|+|+||+.+. ...+.+||||+|.||+|+++|++|+++|++.|+|.
T Consensus       404 ~~~~~~~g~v~vN~~~~-~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~  455 (456)
T cd07145         404 VARELEAGGVVINDSTR-FRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV  455 (456)
T ss_pred             HHHhCCcceEEECCCCC-CCCCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence            99999999999998763 33467999999999999999999999999999885

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=3.7e-88  Score=707.28  Aligned_cols=435  Identities=20%  Similarity=0.276  Sum_probs=398.4

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++..+.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus        21 t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~   99 (474)
T cd07130          21 NGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILPEGL-GEVQEMI   99 (474)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            567899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++..+.+.+ ....  ........+..++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       100 ~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~  176 (474)
T cd07130         100 DICDFAVGLSRQLYG-LTIP--SERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAI  176 (474)
T ss_pred             HHHHHHHHhHHHhcC-cccc--CCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHH
Confidence            999998876554322 1111  11112345778999999999999999987      89999999999999999999999


Q ss_pred             HHHHHH----hhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397          158 LLAKLV----GEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       158 ~l~~~l----~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      ++++++    .++ +|+|++|+|+|+.+.++.|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus       177 ~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~d  256 (474)
T cd07130         177 AVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNAIIVMED  256 (474)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCCCEEEEcCCCCeEEECCC
Confidence            888775    455 89999999999777889999996 999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ .+++||++++.+++++.+++++
T Consensus       257 adl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~  335 (474)
T cd07130         257 ADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEE  335 (474)
T ss_pred             CCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999988 7899999999999999999999


Q ss_pred             HHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          311 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       311 a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      +.+ ++++++||... .+|+|+.|||+.++++ |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+
T Consensus       336 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a  414 (474)
T cd07130         336 AKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNA  414 (474)
T ss_pred             HHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence            974 78999999753 3589999999998776 99999999999999999999999999999999999999999999999


Q ss_pred             HHHHHh--cceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          389 QQFVET--VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       389 ~~~~~~--~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++  +++|.|+||..+. ...+.+||||+|.||+|+++|++++++|++.|+|.+.
T Consensus       415 ~~~~~~~~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~  472 (474)
T cd07130         415 FRWLGPKGSDCGIVNVNIGTS-GAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN  472 (474)
T ss_pred             HHHHhhcCcceEEEEEcCCCC-CCCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence            999987  8999999998643 3457899999999999999999999999999998764

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=3.4e-88  Score=702.96  Aligned_cols=431  Identities=22%  Similarity=0.311  Sum_probs=401.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhh--CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.+.+++++.++.+|++++++.|++||+.  |+. +..+|.++|++++++|++++++|++++++|+|||..+++ .|+..
T Consensus         6 t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~Ev~~   83 (455)
T cd07120           6 TGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR-FEISG   83 (455)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHH
Confidence            57789999999999999999999999985  998 899999999999999999999999999999999999998 79999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.++++++.+.+..+... .   ...+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus        84 ~i~~l~~~~~~~~~~~g~~~-~---~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~  159 (455)
T cd07120          84 AISELRYYAGLARTEAGRMI-E---PEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQI  159 (455)
T ss_pred             HHHHHHHHHHHHHHhcCccc-c---cCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHH
Confidence            99999999988776532211 1   1112356789999999999999999988      899999999999999999999


Q ss_pred             HHHHHHHHhh-h-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397          156 SSLLAKLVGE-Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       156 ~~~l~~~l~~-a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      +..+++++.+ + +|+|++|+|+| +.+.+..|++|+ +|.|.||||+++|+.|++.+++++||+++|+|||||+||++|
T Consensus       160 ~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~d  239 (455)
T cd07120         160 NAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFDD  239 (455)
T ss_pred             HHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECCC
Confidence            9999999999 5 99999999998 567789999997 999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++
T Consensus       240 aDl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~  318 (455)
T cd07120         240 ADLDAALPKLERALT-IFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVER  318 (455)
T ss_pred             CCHHHHHHHHHHHHH-HhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999988 8999999999999999999999


Q ss_pred             HHc-CCeEeeCCcc-CC---CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCH
Q 011397          311 DKV-SGKIVHGGER-DK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK  385 (487)
Q Consensus       311 a~~-~~~~~~gg~~-~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  385 (487)
                      +.+ ++++++||.. +.   +|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||+++|||+|.
T Consensus       319 a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~  398 (455)
T cd07120         319 AIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDL  398 (455)
T ss_pred             HHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence            874 6788887754 22   589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       386 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +.++++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus       399 ~~a~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~  454 (455)
T cd07120         399 ARAMRVARAIRAGTVWINDWNK--LFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY  454 (455)
T ss_pred             HHHHHHHHhcCcceEEECCCCC--CCCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence            9999999999999999999754  3578999999999999999999999999999985

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=3.7e-88  Score=705.07  Aligned_cols=437  Identities=26%  Similarity=0.400  Sum_probs=406.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCC-CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.|++++++.++.+|+++++++|++|++.|+ ++|..+|.++|++++++|+++.++|++++++|+|||..++...|+..+
T Consensus         6 tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~   85 (459)
T cd07089           6 TEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGP   85 (459)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence            5788999999999999999999999999999 999999999999999999999999999999999999987764699999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccc-cccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      ++.++++++.+.++......... ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus        86 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~  165 (459)
T cd07089          86 IGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLS  165 (459)
T ss_pred             HHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence            99999999998876543321110 01123467899999999999999999987      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      +..+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus       166 ~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~iV~~da  245 (459)
T cd07089         166 ALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANIVLDDA  245 (459)
T ss_pred             HHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeEECCCC
Confidence            99999999998 99999999999 455788999996 9999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++
T Consensus       246 dl~~aa~~i~~~~~-~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a  324 (459)
T cd07089         246 DLAAAAPAAVGVCM-HNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARG  324 (459)
T ss_pred             CHHHHHHHHHHHHH-HhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999988 79999999999999999999998


Q ss_pred             H-cCCeEeeCCccCC---CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          312 K-VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       312 ~-~~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      + +|+++++||....   +|+|+.|||+.++++++++++||+||||++|++|+|+||||+++|++++||+++|||+|.+.
T Consensus       325 ~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~  404 (459)
T cd07089         325 RDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDR  404 (459)
T ss_pred             HHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHH
Confidence            6 4789999997643   68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++++++++++|+|+||++.  ...+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus       405 ~~~~~~~~~~G~v~iN~~~--~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~  458 (459)
T cd07089         405 AYRVARRIRTGSVGINGGG--GYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA  458 (459)
T ss_pred             HHHHHHhcCcCeEEECCCC--CCCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence            9999999999999999876  35678899999999999999999999999999875

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=3.7e-88  Score=698.46  Aligned_cols=427  Identities=47%  Similarity=0.800  Sum_probs=396.0

Q ss_pred             CCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHH
Q 011397           14 FDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKEL   93 (487)
Q Consensus        14 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~   93 (487)
                      .+.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||+.++...|+..+++.+++++..+
T Consensus         2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~   81 (436)
T cd07135           2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL   81 (436)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence            57889999999999999999999999999999999999999999999999999999999987469999999999999988


Q ss_pred             hhhhcCCcccccc-ccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh
Q 011397           94 KHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY  166 (487)
Q Consensus        94 ~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a  166 (487)
                      +.+...+...... .......++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+.+++.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~~  161 (436)
T cd07135          82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY  161 (436)
T ss_pred             HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHh
Confidence            8775433221110 0123466789999999999999999986      89999999999999999999999999999999


Q ss_pred             cCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhc
Q 011397          167 MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW  246 (487)
Q Consensus       167 lP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~  246 (487)
                      +|+|++|+++|+.+....|+.|++|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus       162 lP~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~  241 (436)
T cd07135         162 LDPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKF  241 (436)
T ss_pred             CCcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHh
Confidence            99999999998666566788888999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCC
Q 011397          247 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKN  326 (487)
Q Consensus       247 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~  326 (487)
                       +|+||.|+++++||||++++|+|+++|+++++++++|+|.+.+.+||+++..+.+++.++++++  ++++++||...++
T Consensus       242 -~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~a--g~~v~~gg~~~~~  318 (436)
T cd07135         242 -GNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTT--KGKVVIGGEMDEA  318 (436)
T ss_pred             -ccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhc--CCeEEECCCcCCC
Confidence             9999999999999999999999999999999999999994489999999999999999999986  7899999977667


Q ss_pred             CceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCc
Q 011397          327 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA  406 (487)
Q Consensus       327 g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~  406 (487)
                      |+|++|||+.+++++++++++|+||||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|+|+||+.+
T Consensus       319 g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~  398 (436)
T cd07135         319 TRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTL  398 (436)
T ss_pred             CCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCcc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             cccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          407 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       407 ~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      .+...+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus       399 ~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~  435 (436)
T cd07135         399 IHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV  435 (436)
T ss_pred             ccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence            6555688999999999999999999999999999873

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=5.5e-88  Score=705.35  Aligned_cols=434  Identities=26%  Similarity=0.414  Sum_probs=401.7

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++..+.+|+++++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..++
T Consensus        19 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~   97 (465)
T cd07151          19 TGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRIKAN-IEWGAAM   97 (465)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            357899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH-
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS-  156 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~-  156 (487)
                      +.+++++.....+. .....  ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++ 
T Consensus        98 ~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~  174 (465)
T cd07151          98 AITREAATFPLRME-GRILP--SDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGG  174 (465)
T ss_pred             HHHHHHHHhHHHhc-Ccccc--CCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHH
Confidence            99999987665432 11111  01123356788999999999999999987      8999999999999999999996 


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      .++.+++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|.||||+++|+.|++.++++++|+++|+|||||+||++|||
T Consensus       175 ~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~daD  254 (465)
T cd07151         175 LLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVVLEDAD  254 (465)
T ss_pred             HHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCC
Confidence            6899999998 99999999998 567789999997 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      ++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++.+||++++.+.+++.++++++.
T Consensus       255 l~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~  333 (465)
T cd07151         255 IDAAVNAAVFGKF-LHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAV  333 (465)
T ss_pred             HHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999988 899999999999999999999986


Q ss_pred             c-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          313 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       313 ~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      . ++++++||..  +|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++++++
T Consensus       334 ~~ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~  411 (465)
T cd07151         334 EEGATLLVGGEA--EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQF  411 (465)
T ss_pred             hCCCEEEecCCc--CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHH
Confidence            5 6799999864  589999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++|+|+||+++.+ ..+.+||||+|.||+|+++|++++++|++.|++.+.
T Consensus       412 ~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~  464 (465)
T cd07151         412 ARRIDAGMTHINDQPVN-DEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ  464 (465)
T ss_pred             HHhCCcCeEEECCCCCC-CCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence            99999999999997653 347799999999999999999999999999998764

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=100.00  E-value=7.4e-88  Score=698.15  Aligned_cols=434  Identities=50%  Similarity=0.870  Sum_probs=397.5

Q ss_pred             HHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcCC
Q 011397           21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE  100 (487)
Q Consensus        21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~  100 (487)
                      +++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++++++.+..+....
T Consensus         2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (443)
T cd07132           2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE   81 (443)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            57899999999999999999999999999999999999999999999999999875799999999999999988876543


Q ss_pred             ccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcEEE
Q 011397          101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV  174 (487)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~~  174 (487)
                      .............++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+.+++.+++|+|++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~lp~gv~~v  161 (443)
T cd07132          82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPV  161 (443)
T ss_pred             cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCeEEE
Confidence            2211111122357889999999999999999986      8999999999999999999999999999999999999999


Q ss_pred             EeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCCcc
Q 011397          175 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC  254 (487)
Q Consensus       175 v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C  254 (487)
                      ++|+.+.+..|+.+.+|.|+||||+++|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|
T Consensus       162 v~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f-~~~GQ~C  240 (443)
T cd07132         162 VLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKF-INAGQTC  240 (443)
T ss_pred             EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCce
Confidence            999777777788767999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             ccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceeecEE
Q 011397          255 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTL  334 (487)
Q Consensus       255 ~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv  334 (487)
                      +++++||||++++|+|+++|.+++++++.|+|.+++++||++++.+++++.+++++    +++++||..+.+++|+.|||
T Consensus       241 ~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~----a~~~~gg~~~~~~~~~~Ptv  316 (443)
T cd07132         241 IAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSG----GKVAIGGQTDEKERYIAPTV  316 (443)
T ss_pred             eCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhC----CEEEeCCccCCCCCEEeeEE
Confidence            99999999999999999999999999999999668999999999999999999974    58899997655689999999


Q ss_pred             EecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCCCCC
Q 011397          335 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL  414 (487)
Q Consensus       335 ~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~  414 (487)
                      +.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.++++++++++|.|+||++..+...+.+
T Consensus       317 l~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~  396 (443)
T cd07132         317 LTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSL  396 (443)
T ss_pred             EeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987655555789


Q ss_pred             CcccCCCCCCCCcchHHHHHHhhhccEEEEeCCCCCC--CccCCCCc
Q 011397          415 PFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV--PVRYPPYT  459 (487)
Q Consensus       415 pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~--~~~~~~~~  459 (487)
                      ||||+|.||+|+++|.+|+++|++.|++...+...+.  +.+|+|++
T Consensus       397 PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~  443 (443)
T cd07132         397 PFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSLNMEKLNSLRYPPYS  443 (443)
T ss_pred             CCCCCCcccCCCcccHHHHHHhccccEEEEccccccccccccCCCCC
Confidence            9999999999999999999999999999877532244  67888873

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-88  Score=711.00  Aligned_cols=437  Identities=24%  Similarity=0.363  Sum_probs=407.4

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+++++++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus        60 t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  138 (514)
T PRK03137         60 KSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEAD-ADTAEAI  138 (514)
T ss_pred             CCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+..+.......   ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       139 ~~~~~~a~~~~~~~~~~~~~---~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~  215 (514)
T PRK03137        139 DFLEYYARQMLKLADGKPVE---SRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAA  215 (514)
T ss_pred             HHHHHHHHHHHHhcCCcccc---CCCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence            99999999887765333211   1123466789999999999999999988      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc------cccceeeecCCCCcEEE
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK------HLTPVLLELGGKSPVVF  228 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~------~~~p~~~e~gG~~p~iV  228 (487)
                      .+.+++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+.+|+.|++.+++      ++||+++|+|||||+||
T Consensus       216 ~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV  295 (514)
T PRK03137        216 KFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVV  295 (514)
T ss_pred             HHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEE
Confidence            999999998 99999999998 457789999997 9999999999999999999886      78999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHH
Q 011397          229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL  308 (487)
Q Consensus       229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i  308 (487)
                      ++|||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+..++||++++.+.+++.+++
T Consensus       296 ~~daDl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~Gpli~~~~~~~v~~~v  374 (514)
T PRK03137        296 DEDADLDLAAESIVASAF-GFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAYMGPVINQASFDKIMSYI  374 (514)
T ss_pred             CCCCCHHHHHHHHHHHHH-hCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCccCcCCCCCHHHHHHHHHHH
Confidence            999999999999999999 9999999999999999999999999999999999999999844999999999999999999


Q ss_pred             HHHHcCCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          309 DDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       309 ~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      +++.+++++++||..++ .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.
T Consensus       375 ~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~  454 (514)
T PRK03137        375 EIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREH  454 (514)
T ss_pred             HHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence            99987789999997543 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++++++|+|+||+.+.+...+.+||||+|.||+| +++|.+++++|++.|+|...
T Consensus       455 a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~~  513 (514)
T PRK03137        455 LEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEM  513 (514)
T ss_pred             HHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEEe
Confidence            99999999999999998766655677999999999999 68999999999999998754

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=6.8e-88  Score=706.66  Aligned_cols=432  Identities=25%  Similarity=0.360  Sum_probs=397.9

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..++...|+..++
T Consensus        25 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~  104 (479)
T cd07116          25 TGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAI  104 (479)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999998756999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+....... .   ........+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       105 ~~~~~~a~~~~~~~~~~-~---~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~  180 (479)
T cd07116         105 DHFRYFAGCIRAQEGSI-S---EIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASIL  180 (479)
T ss_pred             HHHHHHHHhHHHcCCee-e---cCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence            99999988776542211 1   11112346789999999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC----
Q 011397          158 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG----  231 (487)
Q Consensus       158 ~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d----  231 (487)
                      .+++++.+++|+|++|+|+| +.+.+..|+.|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|    
T Consensus       181 ~l~~l~~~alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~p~~lElGGk~p~iV~~da~~~  260 (479)
T cd07116         181 VLMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIFFADVMDA  260 (479)
T ss_pred             HHHHHHHHHCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCCeEEEECCCCCeEEEecCcccc
Confidence            99999999999999999998 567889999996 999999999999999999999999999999999999999988    


Q ss_pred             --CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 011397          232 --INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLL  308 (487)
Q Consensus       232 --aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i  308 (487)
                        ||+|.|++.++++ + +|+||.|+++++||||++++|+|+++|.++++++++|+|.+ .+.+||++++.+.+++.+++
T Consensus       261 ~~adl~~A~~~i~~~-~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i  338 (479)
T cd07116         261 DDAFFDKALEGFVMF-A-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYI  338 (479)
T ss_pred             cccCHHHHHHHHHHH-H-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHH
Confidence              7999999999985 5 68999999999999999999999999999999999999998 89999999999999999999


Q ss_pred             HHHHc-CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEec
Q 011397          309 DDDKV-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT  382 (487)
Q Consensus       309 ~~a~~-~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t  382 (487)
                      +++.. ++++++||...     .+|+|+.|||+.+++ +|.+++||+||||++|++|+|++|||+++|+++|||+++|||
T Consensus       339 ~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t  417 (479)
T cd07116         339 DIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWT  417 (479)
T ss_pred             HHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEc
Confidence            99875 67999998753     258899999999874 999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          383 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       383 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      +|.++++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|++.+
T Consensus       418 ~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~  477 (479)
T cd07116         418 RDGNTAYRMGRGIQAGRVWTNCYHL--YPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV  477 (479)
T ss_pred             CCHHHHHHHHHhcCcCeEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence            9999999999999999999998643  45789999999999999999999999999999865

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=6.9e-88  Score=703.49  Aligned_cols=434  Identities=28%  Similarity=0.391  Sum_probs=404.3

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCC-CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      ++.+++++++.++.+|+++++++|++|++.|. .+|.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..
T Consensus         5 ~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~   83 (454)
T cd07109           5 STGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR-ADVEA   83 (454)
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHH
Confidence            35679999999999999999999999999876 99999999999999999999999999999999999999998 89999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.++++++..+++..... .   ...+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus        84 ~~~~l~~~~~~~~~~~g~~~-~---~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~  159 (454)
T cd07109          84 AARYFEYYGGAADKLHGETI-P---LGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT  159 (454)
T ss_pred             HHHHHHHHHHHHHHhcCccc-c---cCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence            99999999888766542211 1   1123467889999999999999999987      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      +..+.+++.++ +|+|++|+++| +.+.++.|+.|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++||
T Consensus       160 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~da  239 (454)
T cd07109         160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA  239 (454)
T ss_pred             HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCC
Confidence            99999999997 99999999998 678889999997 9999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      |++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+++++||++++.+.+++.++++++.
T Consensus       240 Dl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~~i~~a~  318 (454)
T cd07109         240 DLEAALPVVVNAII-QNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGFVARAR  318 (454)
T ss_pred             CHHHHHHHHHHHHH-hccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999988899999999999999999999987


Q ss_pred             c-CCeEeeCCccC----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          313 V-SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       313 ~-~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      . ++++++||...    +.|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.
T Consensus       319 ~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~  398 (454)
T cd07109         319 ARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDR  398 (454)
T ss_pred             hCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHH
Confidence            4 67999998653    258999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++++++++++|+|+||++..+ ..+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus       399 ~~~~~~~l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~  453 (454)
T cd07109         399 ALRVARRLRAGQVFVNNYGAG-GGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA  453 (454)
T ss_pred             HHHHHHhcCcCeEEECCCCCC-CCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence            999999999999999997532 3578999999999999999999999999999875

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=1.9e-87  Score=708.31  Aligned_cols=439  Identities=22%  Similarity=0.367  Sum_probs=406.9

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus        41 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  119 (524)
T PRK09407         41 TGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAF-EEVLDVA  119 (524)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      ..++++++.++.+.+.+...... ......+..++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       120 ~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~  198 (524)
T PRK09407        120 LTARYYARRAPKLLAPRRRAGAL-PVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTAL  198 (524)
T ss_pred             HHHHHHHHHHHHhhCCccccccC-CCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHH
Confidence            99999999888876544321111 112367789999999999999999977      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      .+.+++.++ +|+|++|+|+| +.+.++.|++| +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++
T Consensus       199 ~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~-~d~V~fTGs~~~g~~v~~~aa~~~~~v~lElGGknp~iV~~dADl~  277 (524)
T PRK09407        199 AAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN-ADYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVLDDADLD  277 (524)
T ss_pred             HHHHHHHHcCCCcccEEEEecCCchHHHHHHhc-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceeEECCCCCHH
Confidence            999999998 99999999999 56778888876 7999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++++.++++++.. 
T Consensus       278 ~Aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~  356 (524)
T PRK09407        278 KAAAGAVRACF-SNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAK  356 (524)
T ss_pred             HHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhC
Confidence            99999999999 99999999999999999999999999999999999999988 8999999999999999999999865 


Q ss_pred             CCeEeeCCccCC--CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 SGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 ~~~~~~gg~~~~--~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      ++++++||....  +|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|++++||++||||+|.+.++++
T Consensus       357 Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~  436 (524)
T PRK09407        357 GATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAI  436 (524)
T ss_pred             CCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence            679999987432  479999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccc-cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          392 VETVSAGGLVINDTAVH-LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~-~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++|.|+||+...+ ...+.+||||+|.||+|+++|.+++++|++.|+|...+
T Consensus       437 ~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~  492 (524)
T PRK09407        437 AARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR  492 (524)
T ss_pred             HHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence            99999999999986542 24567899999999999999999999999999998774

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=100.00  E-value=1.1e-87  Score=707.44  Aligned_cols=438  Identities=23%  Similarity=0.343  Sum_probs=407.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..++. .|+..++
T Consensus        42 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  120 (500)
T cd07083          42 PSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAI-DDVAEAI  120 (500)
T ss_pred             CCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            578899999999999999999999999999999999999999999999999999999999999999999987 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+..+.........  ..+....++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~  198 (500)
T cd07083         121 DFIRYYARAALRLRYPAVEVVP--YPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGY  198 (500)
T ss_pred             HHHHHHHHHHHHhcCcccccCC--CCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHH
Confidence            9999999998877543221111  123456788999999999999999977      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccc------cceeeecCCCCcEEE
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL------TPVLLELGGKSPVVF  228 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~------~p~~~e~gG~~p~iV  228 (487)
                      ++++++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|+||||+.+|+.|.+.+++++      +|+++|+|||||+||
T Consensus       199 ~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV  278 (500)
T cd07083         199 KVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIV  278 (500)
T ss_pred             HHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhccccccccCcEEEecCCCCeEEE
Confidence            999999998 99999999999 567889999996 999999999999999999998886      999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 011397          229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKL  307 (487)
Q Consensus       229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~  307 (487)
                      ++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ .+++||++++.+.+++.++
T Consensus       279 ~~dadl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~  357 (500)
T cd07083         279 DETADFELVVEGVVVSAF-GFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSY  357 (500)
T ss_pred             CCCCCHHHHHHHHHHHHH-hhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999 99999999999999999999999999999999999999998 7999999999999999999


Q ss_pred             HHHHHcCCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCC
Q 011397          308 LDDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNN  384 (487)
Q Consensus       308 i~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~t~d  384 (487)
                      ++++..++++++||..+. .|+|+.|||+.++++++++++||+||||++|++|+  |++|||+++|+++|||+++|||+|
T Consensus       358 i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d  437 (500)
T cd07083         358 IEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRK  437 (500)
T ss_pred             HHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCC
Confidence            999887779999997643 58999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 011397          385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       385 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~  445 (487)
                      .+.+.++++++++|+|+||+.+.+...+.+||||+|.||+| +++|.+++++|++.|++...
T Consensus       438 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~~  499 (500)
T cd07083         438 REHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER  499 (500)
T ss_pred             HHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEEc
Confidence            99999999999999999999876655577999999999999 68899999999999998753

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=1.1e-87  Score=705.48  Aligned_cols=434  Identities=25%  Similarity=0.365  Sum_probs=402.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh---hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA   80 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~   80 (487)
                      +.+.+++++..+.+++++++++|++|++   .|+.+|.++|.++|+++++.|+++.++|++++++|+|||..++...|+.
T Consensus        31 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~  110 (481)
T cd07141          31 TGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLP  110 (481)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHH
Confidence            4678999999999999999999999998   6999999999999999999999999999999999999999776547999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      .+++.+++++...+++..... .   .......+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.
T Consensus       111 ~~~~~l~~~a~~~~~~~g~~~-~---~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~  186 (481)
T cd07141         111 GAIKVLRYYAGWADKIHGKTI-P---MDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPL  186 (481)
T ss_pred             HHHHHHHHHHHHHHHhcCcee-c---CCCCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcH
Confidence            999999999988776643211 1   1112346789999999999999999988      79999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc-cccceeeecCCCCcEEEcC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDS  230 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~-~~~p~~~e~gG~~p~iV~~  230 (487)
                      ++..+++++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|+||||+.+|+.|++.++. ++||+++|+|||||+||++
T Consensus       187 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~  266 (481)
T cd07141         187 TALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFA  266 (481)
T ss_pred             HHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECC
Confidence            999999999998 99999999999 556788999996 9999999999999999998886 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      |||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++
T Consensus       267 dADl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~  345 (481)
T cd07141         267 DADLDYAVEQAHEALF-FNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIE  345 (481)
T ss_pred             CCCHHHHHHHHHHHHH-hcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999999 799999999999999999999


Q ss_pred             HHHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          310 DDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      ++.. ++++++||... ..|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|++++||++||||+|.+.
T Consensus       346 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~  425 (481)
T cd07141         346 SGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDK  425 (481)
T ss_pred             HHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHH
Confidence            9864 67999999864 368999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      +.++++++++|+|+||++.  ...+.+||||+|.||+|+++|.+++++||+.|+|.+
T Consensus       426 a~~~~~~l~~G~v~iN~~~--~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~  480 (481)
T cd07141         426 AITFSNALRAGTVWVNCYN--VVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI  480 (481)
T ss_pred             HHHHHHhcCcCeEEECCCC--CCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence            9999999999999999854  356789999999999999999999999999999865

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=1e-87  Score=702.83  Aligned_cols=435  Identities=27%  Similarity=0.402  Sum_probs=405.2

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      .+++.+++++.++.++++++++.|++|++.|+.++.++|.++|+++++.|.++.++|++++++|+|||..++. .|+..+
T Consensus         5 ~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~   83 (457)
T cd07090           5 ATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEAR-VDIDSS   83 (457)
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence            3578899999999999999999999999999999999999999999999999999999999999999999998 899999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.++++++..+... +....   ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        84 ~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~  159 (457)
T cd07090          84 ADCLEYYAGLAPTLS-GEHVP---LPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA  159 (457)
T ss_pred             HHHHHHHHHHHHHhC-Ceeec---cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence            999999988766532 22111   1123466789999999999999999987      7999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ..+.+++.++ +|+|++|+|+|+.+.+..|+.|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       160 ~~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAdl  239 (457)
T cd07090         160 LLLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADL  239 (457)
T ss_pred             HHHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCCH
Confidence            9999999998 99999999999777888999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++.+++|+|.+ ++++||+++..+++++.++|+++..
T Consensus       240 ~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~  318 (457)
T cd07090         240 ENAVNGAMMANF-LSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQ  318 (457)
T ss_pred             HHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999999874


Q ss_pred             -CCeEeeCCccC------CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          314 -SGKIVHGGERD------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       314 -~~~~~~gg~~~------~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                       ++++++||...      ++|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|++++||+++|||+|.+
T Consensus       319 ~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~  398 (457)
T cd07090         319 EGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQ  398 (457)
T ss_pred             CCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHH
Confidence             67999998753      25889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      .++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|++...
T Consensus       399 ~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~  455 (457)
T cd07090         399 RAHRVIAQLQAGTCWINTYNI--SPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE  455 (457)
T ss_pred             HHHHHHHhCCcCeEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence            999999999999999998643  457799999999999999999999999999998653

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=6.6e-88  Score=697.89  Aligned_cols=417  Identities=25%  Similarity=0.424  Sum_probs=391.6

Q ss_pred             HHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhhc
Q 011397           19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT   98 (487)
Q Consensus        19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~   98 (487)
                      +++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.+++++...+++..
T Consensus         1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~   79 (429)
T cd07100           1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFLA   79 (429)
T ss_pred             CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999999999999999999999999998 8999999999999999888764


Q ss_pred             CCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh-cCCCc
Q 011397           99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS  171 (487)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g~  171 (487)
                      ......    .....+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+.+++.++ +|+|+
T Consensus        80 ~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gv  155 (429)
T cd07100          80 DEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGV  155 (429)
T ss_pred             CeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCc
Confidence            432211    13456789999999999999999997      89999999999999999999999999999997 99999


Q ss_pred             EEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCC
Q 011397          172 IRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN  250 (487)
Q Consensus       172 v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~  250 (487)
                      +|+|+|+.+.+..|++|+ +|.|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| +|+
T Consensus       156 v~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~-~~~  234 (429)
T cd07100         156 FQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL-QNA  234 (429)
T ss_pred             EEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hcc
Confidence            999999667788999996 999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             CCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-CCeEeeCCccCC-CC
Q 011397          251 GQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK-NK  327 (487)
Q Consensus       251 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~~-~g  327 (487)
                      ||.|+++++||||++++|+|+++|++++.++++|+|.+ ++++||++++.+.+++.++++++.+ ++++++||...+ .|
T Consensus       235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g  314 (429)
T cd07100         235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG  314 (429)
T ss_pred             CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence            99999999999999999999999999999999999988 8999999999999999999999875 679999987543 57


Q ss_pred             ceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCcc
Q 011397          328 LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV  407 (487)
Q Consensus       328 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~  407 (487)
                      +|++|||+.+++++|++++||+||||++|++|+|.+|||+++|++++||+++|||+|.+.++++++++++|.|+||++..
T Consensus       315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~  394 (429)
T cd07100         315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK  394 (429)
T ss_pred             eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999763


Q ss_pred             ccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          408 HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       408 ~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                        ..+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus       395 --~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  428 (429)
T cd07100         395 --SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW  428 (429)
T ss_pred             --CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence              4578999999999999999999999999999875

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=1.2e-87  Score=700.21  Aligned_cols=434  Identities=25%  Similarity=0.408  Sum_probs=402.7

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhh--CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA   80 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~   80 (487)
                      ++.+.+++++.++.+|++++++.|++||+.  |+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+.
T Consensus         5 ~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~   83 (454)
T cd07118           5 AHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-GEIE   83 (454)
T ss_pred             CCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHH
Confidence            357889999999999999999999999985  9999999999999999999999999999999999999999998 8999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      .+++.+++++...+.... ....  ....+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.
T Consensus        84 ~~i~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~  160 (454)
T cd07118          84 GAADLWRYAASLARTLHG-DSYN--NLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG  160 (454)
T ss_pred             HHHHHHHHHHHHHHHhcC-cccc--cCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence            999999998876554322 1111  01112355788999999999999999998      79999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      ++..+.+++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+++|+.|.+.++.+++|+++|+|||||+||++|
T Consensus       161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~d  240 (454)
T cd07118         161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFAD  240 (454)
T ss_pred             HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCC
Confidence            999999999998 999999999984 46789999997 999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.+++++
T Consensus       241 Adl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~  319 (454)
T cd07118         241 ADLDAAADAVVFGVY-FNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDA  319 (454)
T ss_pred             CCHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999988 8999999999999999999999


Q ss_pred             HHc-CCeEeeCCccCC--CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          311 DKV-SGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       311 a~~-~~~~~~gg~~~~--~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      +.. ++++++||....  .|+|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.
T Consensus       320 a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~  399 (454)
T cd07118         320 GRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDT  399 (454)
T ss_pred             HHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHH
Confidence            875 679999997653  68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++++++++++|.|+||++..  ..+.+||||+|.||+|+++|++++++|++.|++.
T Consensus       400 ~~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~  453 (454)
T cd07118         400 ALTVARRIRAGTVWVNTFLD--GSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH  453 (454)
T ss_pred             HHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence            99999999999999999754  5678999999999999999999999999999875

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=1.6e-87  Score=701.25  Aligned_cols=434  Identities=22%  Similarity=0.357  Sum_probs=406.0

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      ++.|.+++++..+.+|++++++.|++|++.|+.++..+|.++|+++++.|++++++|+++++.|+|||..++. .|+..+
T Consensus         4 ~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~   82 (452)
T cd07102           4 IDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-GEIRGM   82 (452)
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence            3577899999999999999999999999999999999999999999999999999999999999999999998 899999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.++++++.++++.......   ...+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~  159 (452)
T cd07102          83 LERARYMISIAEEALADIRVP---EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCG  159 (452)
T ss_pred             HHHHHHHHHHHHHhcCCcccC---CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHH
Confidence            999999999888775443221   1223356789999999999999999986      8999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ..+.+++.++ +|+|++|+|+++.+.+..|+.|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       160 ~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl  239 (452)
T cd07102         160 ERFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADL  239 (452)
T ss_pred             HHHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCH
Confidence            9999999998 99999999999668889999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      |.|++.+++++| +|+||.|+++++||||++++|+|+++|++++.++++|||.+ .+++||+++..+.+++.++++++..
T Consensus       240 ~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~  318 (452)
T cd07102         240 DAAAESLVDGAF-FNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIA  318 (452)
T ss_pred             HHHHHHHHHHHH-HhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999999864


Q ss_pred             -CCeEeeCCccC----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          314 -SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       314 -~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                       ++++++||...    .+|+|+.|||+.+++++|+++++|+||||++|++|+|.+|||+++|++++||+++|||+|.+.+
T Consensus       319 ~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~  398 (452)
T cd07102         319 KGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARA  398 (452)
T ss_pred             CCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence             67999998642    3689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +++++++++|+|+||++..  ..+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus       399 ~~~~~~l~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~  451 (452)
T cd07102         399 EALGEQLETGTVFMNRCDY--LDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH  451 (452)
T ss_pred             HHHHHHcCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence            9999999999999998653  4577999999999999999999999999999875

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=1.7e-87  Score=707.79  Aligned_cols=437  Identities=19%  Similarity=0.306  Sum_probs=400.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNE-REPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~-~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.+.+++++.++.+|+++++++|++||+.|+.+|..+|.++|++++++|++ ++++|++++++|+|||..++...|+...
T Consensus        56 tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~  135 (522)
T cd07123          56 HAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACEL  135 (522)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHH
Confidence            478899999999999999999999999999999999999999999999996 8999999999999999999875688899


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeec-eEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF-GVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      ++.+++++....++........   ..+...+++++|+ |||++|+|||||+.      ++|| +||+||+|||+.+|++
T Consensus       136 ~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~  211 (522)
T cd07123         136 IDFLRFNVKYAEELYAQQPLSS---PAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLS  211 (522)
T ss_pred             HHHHHHHHHHHHHhcCccccCC---CCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHH
Confidence            9999999988776643322111   1123567899998 99999999999976      6788 6999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcccc------ceeeecCCCCcE
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLT------PVLLELGGKSPV  226 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~------p~~~e~gG~~p~  226 (487)
                      +..+.+++.++ +|+|+||+|+|+ .+.+..|+.|+ +|.|+||||+++|+.|++.++++++      |+++|+|||||+
T Consensus       212 ~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~  291 (522)
T cd07123         212 NYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFH  291 (522)
T ss_pred             HHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhcccccccCCEEEECCCCCee
Confidence            99999999998 999999999994 46789999996 9999999999999999999999887      899999999999


Q ss_pred             EEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHH
Q 011397          227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLS  305 (487)
Q Consensus       227 iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~  305 (487)
                      ||++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ .+++||+++..+++++.
T Consensus       292 IV~~dAdl~~Aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~  370 (522)
T cd07123         292 LVHPSADVDSLVTATVRGAF-EYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIK  370 (522)
T ss_pred             EECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHH
Confidence            99999999999999999999 99999999999999999999999999999999999999999 89999999999999999


Q ss_pred             HHHHHHHc--CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCC--HHHHHHHHhcCC-CCceEE
Q 011397          306 KLLDDDKV--SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGT-KPLAAY  379 (487)
Q Consensus       306 ~~i~~a~~--~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~~~  379 (487)
                      ++++++.+  ++++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|  ++|||+++|++. |||++|
T Consensus       371 ~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~  450 (522)
T cd07123         371 GYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGA  450 (522)
T ss_pred             HHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEE
Confidence            99999864  67999998754 3589999999999999999999999999999999984  799999999985 999999


Q ss_pred             EecCCHHHHHHHHHhc--ceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 011397          380 LFTNNKKLKQQFVETV--SAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       380 v~t~d~~~~~~~~~~~--~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~  445 (487)
                      |||+|.+.+.++++++  ++|.|+||+.+.+...+.+||||+|.||+| +++|.+++++|++.|++...
T Consensus       451 Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~  519 (522)
T cd07123         451 IFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIKET  519 (522)
T ss_pred             EEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEEEe
Confidence            9999999999999996  599999999766555578999999999996 99999999999999998765

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=2.1e-87  Score=704.48  Aligned_cols=435  Identities=25%  Similarity=0.370  Sum_probs=404.7

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.+.+++++..+.+|++++++.|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||..+++ .|+..
T Consensus        22 tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~  100 (482)
T cd07119          22 NGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTLRESE-IDIDD  100 (482)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHH
Confidence            4678999999999999999999999997  59999999999999999999999999999999999999999998 79999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      .++.++++++..++... ....   ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       101 ~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~  176 (482)
T cd07119         101 VANCFRYYAGLATKETG-EVYD---VPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLT  176 (482)
T ss_pred             HHHHHHHHHHHHHHhcC-cccc---CCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHH
Confidence            99999999888776432 2111   1123456789999999999999999998      799999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      +.++++++.++ +|+|++|+|+|+. +.+..|++|+ +|.|.||||+++|+.|++.++++++|+++|+|||||+||++||
T Consensus       177 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGkn~~iV~~dA  256 (482)
T cd07119         177 TIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKNPNIVFADA  256 (482)
T ss_pred             HHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEECCCC
Confidence            99999999998 9999999999854 5789999996 9999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++.++++|+|.+ ++++||++++.+.+++.++++++
T Consensus       257 Dl~~Aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a  335 (482)
T cd07119         257 DFETAVDQALNGVF-FNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLG  335 (482)
T ss_pred             CHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999988 88999999999999999999998


Q ss_pred             Hc-CCeEeeCCccCC-----CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCH
Q 011397          312 KV-SGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK  385 (487)
Q Consensus       312 ~~-~~~~~~gg~~~~-----~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  385 (487)
                      .+ ++++++||....     .|+|+.|||+.+++++|+++++|+||||++|++|+|++|||+++|++++||++||||+|.
T Consensus       336 ~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~  415 (482)
T cd07119         336 KEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDI  415 (482)
T ss_pred             HHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCH
Confidence            74 679999997532     589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       386 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +.++++++++++|.|+||++..  ..+.+||||+|.||+|+++|++|+++||+.|+|+...
T Consensus       416 ~~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~  474 (482)
T cd07119         416 ARANRVARRLRAGTVWINDYHP--YFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL  474 (482)
T ss_pred             HHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence            9999999999999999998543  4678999999999999999999999999999998765

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=1.5e-87  Score=707.57  Aligned_cols=438  Identities=21%  Similarity=0.300  Sum_probs=402.1

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN-EREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.+.+++++..+.+|+++++++|++||+.|+.+|..+|.++|++++++|+ +++++|+++++.|+||++.+++..++..+
T Consensus        56 ~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~  135 (533)
T TIGR01236        56 HQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAEL  135 (533)
T ss_pred             CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHH
Confidence            46889999999999999999999999999999999999999999999999 59999999999999999999983349999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeec-eEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF-GVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      ++.+++++.....+......   ....+...++.++|+ |||++|+|||||+.      ++|| +||+||+|||+.+|.+
T Consensus       136 i~~~~~~a~~a~~~~~~~~~---~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~  211 (533)
T TIGR01236       136 IDFFRFNVKYARELYEQQPS---ESAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLS  211 (533)
T ss_pred             HHHHHHHHHHHHHhcCcccc---CCCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHH
Confidence            99999999877665432210   011234567899999 99999999999987      6788 8999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccc------eeeecCCCCcE
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPV  226 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p------~~~e~gG~~p~  226 (487)
                      +.++++++.++ +|+|++|+|+| +.+.++.|+.|+ ++.|+||||+++|+.|++.++++++|      +++|+|||||+
T Consensus       212 ~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~  291 (533)
T TIGR01236       212 NYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFH  291 (533)
T ss_pred             HHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeE
Confidence            99999999998 99999999999 467889999997 99999999999999999999998874      99999999999


Q ss_pred             EEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHH
Q 011397          227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLS  305 (487)
Q Consensus       227 iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~  305 (487)
                      ||++|||+|.|++.+++|+| .|+||.|+++++||||+++||+|+++|+++++++++|+|.+ .+++||+++..+++++.
T Consensus       292 IV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~  370 (533)
T TIGR01236       292 VVHPSADIDHAVTATIRGAF-EYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNV  370 (533)
T ss_pred             EECCCCCHHHHHHHHHHHHH-hhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHH
Confidence            99999999999999999999 99999999999999999999999999999999999999988 88999999999999999


Q ss_pred             HHHHHHHcC---CeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCC--HHHHHHHH-hcCCCCceE
Q 011397          306 KLLDDDKVS---GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAA  378 (487)
Q Consensus       306 ~~i~~a~~~---~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~  378 (487)
                      ++++++.+.   +++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|  ++|||+++ |+++|||++
T Consensus       371 ~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a  450 (533)
T TIGR01236       371 KYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTG  450 (533)
T ss_pred             HHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceE
Confidence            999998753   5999998764 3589999999999999999999999999999999998  59999999 889999999


Q ss_pred             EEecCCHHHHHHHHHhcc--eeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEeC
Q 011397          379 YLFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       379 ~v~t~d~~~~~~~~~~~~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +|||+|.+.+.+++++++  +|+|+||+.+.+...+.+||||+|.||+| +++|.+++++|++.|++....
T Consensus       451 ~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~  521 (533)
T TIGR01236       451 AVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETF  521 (533)
T ss_pred             EEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEc
Confidence            999999999999999977  99999998766555678999999999998 999999999999999988764

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=1.8e-87  Score=698.32  Aligned_cols=429  Identities=25%  Similarity=0.367  Sum_probs=399.1

Q ss_pred             hhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHH
Q 011397            6 ETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTS   85 (487)
Q Consensus         6 ~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~   85 (487)
                      |.+++++.++.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.
T Consensus         2 ~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~~   80 (443)
T cd07152           2 AVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAAIGE   80 (443)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHH
Confidence            6789999999999999999999999999999999999999999999999999999999999999999998 799999999


Q ss_pred             HHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH-HH
Q 011397           86 IKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS-SL  158 (487)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~-~~  158 (487)
                      ++++++....... ....   ...+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++ ..
T Consensus        81 l~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~  156 (443)
T cd07152          81 LHEAAGLPTQPQG-EILP---SAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVV  156 (443)
T ss_pred             HHHHHHhHHHhCC-cccc---ccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHH
Confidence            9999876543321 1111   1123356789999999999999999988      8999999999999999999996 78


Q ss_pred             HHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHH
Q 011397          159 LAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV  236 (487)
Q Consensus       159 l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~  236 (487)
                      +.+++.++ +|+|++|+++|+.+.+..|+.|+ +|.|+||||+.+|+.|.+.+++++||+++|+|||||+||++|||++.
T Consensus       157 l~~~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~  236 (443)
T cd07152         157 IARLFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDL  236 (443)
T ss_pred             HHHHHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHH
Confidence            99999998 99999999999778889999997 99999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-C
Q 011397          237 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-S  314 (487)
Q Consensus       237 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~  314 (487)
                      |++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++.+||++++.+++++.++++++.. +
T Consensus       237 aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G  315 (443)
T cd07152         237 AASNGAWGAF-LHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG  315 (443)
T ss_pred             HHHHHHHHHH-hhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence            9999999999 99999999999999999999999999999999999999988 8899999999999999999999875 7


Q ss_pred             CeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHh
Q 011397          315 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET  394 (487)
Q Consensus       315 ~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~  394 (487)
                      +++++||..  +|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|++++||+++|||+|.+.+++++++
T Consensus       316 a~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~  393 (443)
T cd07152         316 ARLEAGGTY--DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADR  393 (443)
T ss_pred             CEEEeccCc--CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHh
Confidence            799999875  489999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEE
Q 011397          395 VSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       395 ~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~  443 (487)
                      +++|+|+||+++.+ ..+.+||||+|.||+| +++|++++++|++.|+++
T Consensus       394 l~~G~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~  442 (443)
T cd07152         394 LRTGMLHINDQTVN-DEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT  442 (443)
T ss_pred             CCcCeEEECCCCCC-CCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence            99999999997654 3578999999999999 888999999999999875

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=3.2e-87  Score=700.23  Aligned_cols=434  Identities=27%  Similarity=0.383  Sum_probs=400.4

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh-hCC-CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGK-TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.+.+++++.++.+|+++++++|++||+ .|+ .+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..
T Consensus        31 t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~  110 (481)
T cd07143          31 TGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQA  110 (481)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence            4678999999999999999999999998 599 99999999999999999999999999999999999997665479999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.+++++.......... ..   .......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       111 ~~~~~~~~a~~a~~~~g~~-~~---~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~  186 (481)
T cd07143         111 SADTFRYYGGWADKIHGQV-IE---TDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLS  186 (481)
T ss_pred             HHHHHHHHHHHHHHhcCcc-cc---CCCCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHH
Confidence            9999999987765432211 11   1122356789999999999999999988      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc-cccceeeecCCCCcEEEcCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~-~~~p~~~e~gG~~p~iV~~d  231 (487)
                      +..+.+++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|
T Consensus       187 ~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~d  266 (481)
T cd07143         187 ALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDD  266 (481)
T ss_pred             HHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEECCC
Confidence            99999999998 99999999999 456788999996 9999999999999999998885 78999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++
T Consensus       267 ADl~~Aa~~i~~~~~-~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~  345 (481)
T cd07143         267 ADLESAVVWTAYGIF-FNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIES  345 (481)
T ss_pred             CCHHHHHHHHHHHHH-hccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999988 8999999999999999999998


Q ss_pred             HHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          311 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       311 a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      +.. ++++++||..+ ..|+|+.|||+.++++++++++||+||||++|++|+|.+|||+++|++++||++||||+|.+.+
T Consensus       346 a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~  425 (481)
T cd07143         346 GKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNA  425 (481)
T ss_pred             HHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence            864 77999999764 3689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      .++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+|.+
T Consensus       426 ~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~  479 (481)
T cd07143         426 IRVANALKAGTVWVNCYNL--LHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHI  479 (481)
T ss_pred             HHHHHhcCcCeEEECCCCC--CCCCCCCCCccccccCcccHHHHHHHHhCeEEEEE
Confidence            9999999999999998643  56789999999999999999999999999999865

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=3.6e-87  Score=700.14  Aligned_cols=442  Identities=29%  Similarity=0.462  Sum_probs=405.7

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      .+.|.+++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|.+++++|++++++|+|||..+++..|+..+
T Consensus         4 ~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~~~~   83 (465)
T cd07098           4 ATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVT   83 (465)
T ss_pred             CCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            35778999999999999999999999999999999999999999999999999999999999999999999875799999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.++++++....+.................+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~  163 (465)
T cd07098          84 CEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSS  163 (465)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHH
Confidence            9999999888776554322111100122356788999999999999999987      8999999999999999999999


Q ss_pred             HHHHHHH----hhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcC
Q 011397          157 SLLAKLV----GEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS  230 (487)
Q Consensus       157 ~~l~~~l----~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~  230 (487)
                      ..+++++    .++ +|+|+||+|+|+.+.+..|+.|+ |+.|.||||+.+|+.|.+.++++++|+++|+|||||+||++
T Consensus       164 ~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~iV~~  243 (465)
T cd07098         164 GFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLD  243 (465)
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECC
Confidence            9877766    455 89999999999768899999997 99999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      |||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++..+++|+|.+ .+++||++++.+.+++.++++
T Consensus       244 dadl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~  322 (465)
T cd07098         244 DADLDQIASIIMRGTF-QSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVA  322 (465)
T ss_pred             CCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999988 899999999999999999999


Q ss_pred             HHHc-CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecC
Q 011397          310 DDKV-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN  383 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~  383 (487)
                      ++.. ++++++||...     .+|+|++|||+.+++++++++++|+||||++|++|+|.+||++++|++++||+++|||+
T Consensus       323 ~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~  402 (465)
T cd07098         323 DAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGK  402 (465)
T ss_pred             HHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcC
Confidence            9864 77999998642     25899999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          384 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       384 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      |.+.++++++++++|.|+||+.+.+...+.+||||+|.||+|+++|.+++++|++.|+|.+.
T Consensus       403 d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~  464 (465)
T cd07098         403 DIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED  464 (465)
T ss_pred             CHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence            99999999999999999999976555668899999999999999999999999999998764

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=2.4e-87  Score=699.22  Aligned_cols=434  Identities=27%  Similarity=0.398  Sum_probs=403.1

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++..+.++++++++.|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..++
T Consensus         6 t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i   85 (453)
T cd07115           6 TGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDVPRAA   85 (453)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999756999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++..++..... .   ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        86 ~~l~~~~~~~~~~~g~~-~---~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~  161 (453)
T cd07115          86 DTFRYYAGWADKIEGEV-I---PVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSAL  161 (453)
T ss_pred             HHHHHHHHHHHHhcCce-e---cCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHH
Confidence            99999987655432211 1   11123356789999999999999999998      79999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .+.+++.++ +|+|++|+|+| +.+.++.|+.|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       162 ~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAdl  241 (453)
T cd07115         162 RIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADADL  241 (453)
T ss_pred             HHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCCH
Confidence            999999998 99999999999 456788999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++.+
T Consensus       242 ~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~  320 (453)
T cd07115         242 DAAVRAAATGIF-YNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGRE  320 (453)
T ss_pred             HHHHHHHHHHHH-hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999999875


Q ss_pred             -CCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 -SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 -~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                       ++++++||..+. .|+|++|||+.++++++++++||+||||++|++|+|.+|||+++|++++||+++|||+|.+.++++
T Consensus       321 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~  400 (453)
T cd07115         321 EGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRV  400 (453)
T ss_pred             CCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHH
Confidence             679999987643 588999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      ++++++|+|+||++.  ...+.+||||+|.||+|+++|.+++++|++.|++.+
T Consensus       401 ~~~l~~G~v~iN~~~--~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~  451 (453)
T cd07115         401 AAALKAGTVWINTYN--RFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWV  451 (453)
T ss_pred             HHhcCccEEEECCCC--CCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEE
Confidence            999999999999854  356789999999999999999999999999999865

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-87  Score=702.16  Aligned_cols=435  Identities=25%  Similarity=0.392  Sum_probs=404.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      ++|.+++++.++.+|+++++++|++||+  .|+.+|.++|.++|+++++.|++++++|+++++.|+|||..++...|+..
T Consensus        44 tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~  123 (494)
T PRK09847         44 TQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPG  123 (494)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            4688999999999999999999999997  59999999999999999999999999999999999999999876469999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.++++++.++.+.+....    ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       124 ~~~~l~~~a~~~~~~~g~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~  199 (494)
T PRK09847        124 AARAIRWYAEAIDKVYGEVAT----TSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS  199 (494)
T ss_pred             HHHHHHHHHHHHHHhcCcccc----CCCCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHH
Confidence            999999999988876532211    1122355789999999999999999998      789999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh-ccccceeeecCCCCcEEEcCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~-~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      +..+++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|+||||+.+|+.|.+.++ .+++|+++|+|||||+||.+|
T Consensus       200 ~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~d  279 (494)
T PRK09847        200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFAD  279 (494)
T ss_pred             HHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCC
Confidence            99999999998 99999999998 567789999997 999999999999999999888 589999999999999999999


Q ss_pred             C-CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          232 I-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       232 a-Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      + |+|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++.+++|+|.+ ++.+||++++.+++++.++|+
T Consensus       280 aaDl~~Aa~~i~~~~~-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~  358 (494)
T PRK09847        280 CPDLQQAASATAAGIF-YNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIR  358 (494)
T ss_pred             ccCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHH
Confidence            7 99999999999999 99999999999999999999999999999999999999988 899999999999999999999


Q ss_pred             HHHcCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          310 DDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       310 ~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                      ++...+++++||.....+.|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.+.
T Consensus       359 ~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~  438 (494)
T PRK09847        359 EGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAH  438 (494)
T ss_pred             HHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence            99876699999876556789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|.+.
T Consensus       439 ~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~  492 (494)
T PRK09847        439 RMSRRLKAGSVFVNNYND--GDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWIS  492 (494)
T ss_pred             HHHHhCCcceEEECCCCC--CCCCCCcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence            999999999999999653  457799999999999999999999999999998754

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=3.3e-87  Score=702.82  Aligned_cols=435  Identities=28%  Similarity=0.415  Sum_probs=402.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhh-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFAS-GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.+.+++++..+.++++.++++|++|++. |+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+
T Consensus        32 tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~  111 (484)
T cd07144          32 TGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEI  111 (484)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence            46789999999999999999999999996 88999999999999999999999999999999999999877644799999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.+++++++.+.+.. ....   ...+...+..++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus       112 ~~~l~~~~~~~~~~~g-~~~~---~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~  187 (484)
T cd07144         112 IAVIRYYAGWADKIQG-KTIP---TSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSL  187 (484)
T ss_pred             HHHHHHHHHHHHHhcC-ceec---CCCCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence            9999999988776632 2111   1122346788999999999999999997      7999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      ..+.+++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||
T Consensus       188 ~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~~~~~~lElGGk~p~iV~~dAD  267 (484)
T cd07144         188 LYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFEDAD  267 (484)
T ss_pred             HHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCC
Confidence            9999999998 99999999999 567889999997 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhh-hcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      ++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++++ +++|+|.+ ++++||+++..+++++.++++++
T Consensus       268 l~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a  346 (484)
T cd07144         268 LDQAVKWAAAGIM-YNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKG  346 (484)
T ss_pred             HHHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHH
Confidence            9999999999999 999999999999999999999999999999985 89999988 89999999999999999999998


Q ss_pred             Hc-CCeEeeCCccCC----CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          312 KV-SGKIVHGGERDK----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       312 ~~-~~~~~~gg~~~~----~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      .+ ++++++||....    .|+|++|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+
T Consensus       347 ~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~  426 (484)
T cd07144         347 KKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIR  426 (484)
T ss_pred             HHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence            74 679999987643    5899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      .+.++++++++|+|+||+++.  ..+.+||||+|.||+|+++|.+++++|++.|+|+..
T Consensus       427 ~a~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  483 (484)
T cd07144         427 RAHRVARELEAGMVWINSSND--SDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN  483 (484)
T ss_pred             HHHHHHHhcCcCEEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence            999999999999999998653  457899999999999999999999999999998753

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=3e-87  Score=701.78  Aligned_cols=433  Identities=24%  Similarity=0.371  Sum_probs=403.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhh--CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFAS--GKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.+.+++++..+.+|++.++++|++|++.  |+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..
T Consensus        23 tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~  102 (471)
T cd07139          23 TEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPG  102 (471)
T ss_pred             CCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            46889999999999999999999999985  9999999999999999999999999999999999999998876469999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.++++++..+.+........   ..+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~  179 (471)
T cd07139         103 PAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLD  179 (471)
T ss_pred             HHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHH
Confidence            99999999988776543222111   123456789999999999999999998      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      +..+.+++.++ +|+|++|+++|+.+.+..|+.|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++|||
T Consensus       180 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~~~~~lElGG~np~iV~~dAD  259 (471)
T cd07139         180 AYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLARVTLELGGKSAAIVLDDAD  259 (471)
T ss_pred             HHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCEEEEEcCCCCeeEECCCCC
Confidence            99999999998 99999999999777889999997 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      ++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.+++++++
T Consensus       260 l~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~  338 (471)
T cd07139         260 LDAAVPGLVPASL-MNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGR  338 (471)
T ss_pred             HHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999988 899999999999999999999886


Q ss_pred             c-CCeEeeCCccCC---CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          313 V-SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       313 ~-~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      . ++++++||..+.   +|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.+
T Consensus       339 ~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~  418 (471)
T cd07139         339 AEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERG  418 (471)
T ss_pred             HCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence            4 679999997543   488999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +++++++++|.|+||+++   ..+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus       419 ~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~  470 (471)
T cd07139         419 LAVARRIRTGTVGVNGFR---LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY  470 (471)
T ss_pred             HHHHHhCCcceEEECCCC---CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence            999999999999999864   3578999999999999999999999999999985

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=3.1e-87  Score=700.51  Aligned_cols=430  Identities=25%  Similarity=0.387  Sum_probs=399.7

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..++
T Consensus        22 t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~  101 (467)
T TIGR01804        22 NQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTLEETSVADMDDIA  101 (467)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999547999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++..+...... ..   ...+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       102 ~~l~~~a~~~~~~~~~~-~~---~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~  177 (467)
T TIGR01804       102 DVFEFFAGLADKDGGEI-IP---LPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTAL  177 (467)
T ss_pred             HHHHHHHHHHHHhCCcc-cc---CCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHH
Confidence            99999988776643211 11   1112356789999999999999999998      79999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .+++++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       178 ~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~~lElGG~~~~iV~~dADl  257 (467)
T TIGR01804       178 KVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHVTMELGGKSPLIVFDDADL  257 (467)
T ss_pred             HHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEecCCCCeeEECCCCCH
Confidence            999999998 999999999985 67889999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++..
T Consensus       258 ~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~  336 (467)
T TIGR01804       258 ELAVDQAMNGNF-FSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKE  336 (467)
T ss_pred             HHHHHHHHHHHH-HhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999998864


Q ss_pred             -CCeEeeCCccCC-----CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          314 -SGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       314 -~~~~~~gg~~~~-----~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                       ++++++||....     +|+|+.|||+.++++++++++||+||||++|++|+|.||||+++|++++||+++|||+|.++
T Consensus       337 ~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~  416 (467)
T TIGR01804       337 EGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGR  416 (467)
T ss_pred             CCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence             679999987532     48899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhcc
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK  440 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k  440 (487)
                      ++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|
T Consensus       417 ~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~  467 (467)
T TIGR01804       417 AHRVANQLKAGTVWINDFHP--YPAEAPWGGYKQSGIGRENGKAGLAEYTEVK  467 (467)
T ss_pred             HHHHHHhCCcceEEECCCCC--CCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence            99999999999999998653  4577899999999999999999999999875

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=4.1e-87  Score=699.45  Aligned_cols=428  Identities=27%  Similarity=0.440  Sum_probs=400.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+++++++++|++|++.|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|+..++
T Consensus        23 ~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~  102 (466)
T cd07138          23 TEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGI  102 (466)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999999999999999999999999999999988646999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.++.+.....        ....+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       103 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~  174 (466)
T cd07138         103 GHLRAAADALKDFEFEER--------RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAI  174 (466)
T ss_pred             HHHHHHHHhhhhcccccc--------CceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHH
Confidence            999999988776532211        2245678999999999999999977      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++.+++.++ +|+|+||+++|+ .+.+..|+.|+ +|.|.||||+.+|+.|.+.++.+++|+++|+|||||+||++|||+
T Consensus       175 ~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~v~lElgG~~p~iV~~dADl  254 (466)
T cd07138         175 ILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILDDADL  254 (466)
T ss_pred             HHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCCCH
Confidence            999999998 999999999984 46789999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+.+++.++++++.+
T Consensus       255 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~  333 (466)
T cd07138         255 EKAVPRGVAACF-ANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIE  333 (466)
T ss_pred             HHHHHHHHHHHH-hccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999999864


Q ss_pred             -CCeEeeCCccC----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          314 -SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       314 -~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                       ++++++||...    ..|+|+.|||+.++++++++++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.+
T Consensus       334 ~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a  413 (466)
T cd07138         334 EGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERA  413 (466)
T ss_pred             CCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHH
Confidence             77999998642    2589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +++++++++|+|+||+..   ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus       414 ~~~~~~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~  465 (466)
T cd07138         414 RAVARRLRAGQVHINGAA---FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ  465 (466)
T ss_pred             HHHHHhcCcceEEECCCC---CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence            999999999999999853   4678999999999999999999999999999875

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=8.1e-87  Score=699.76  Aligned_cols=436  Identities=25%  Similarity=0.398  Sum_probs=404.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|.+++++|++++++|+|||..+++ .|+..++
T Consensus        24 ~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ev~~~i  102 (478)
T cd07131          24 LEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGR-GDVQEAI  102 (478)
T ss_pred             CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++...+... +.....  .......+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       103 ~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~  179 (478)
T cd07131         103 DMAQYAAGEGRRLF-GETVPS--ELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACAL  179 (478)
T ss_pred             HHHHHHHHHHHHhC-Cccccc--CCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHH
Confidence            99999988776542 221111  1112356789999999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .+.+++.++ +|+|+||+++| +.+.+..|+.|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       180 ~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dADl  259 (478)
T cd07131         180 KLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMDDADL  259 (478)
T ss_pred             HHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeEEECCCCCH
Confidence            999999998 99999999999 455888899996 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ .+++||++++.+.+++.++++++..
T Consensus       260 ~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~  338 (478)
T cd07131         260 DLALEGALWSAF-GTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKE  338 (478)
T ss_pred             HHHHHHHHHHHH-hcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999998 8999999999999999999999875


Q ss_pred             -CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          314 -SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       314 -~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                       ++++++||...     .+|+|++|||+.+++++++++++|+||||++|++|+|++|||+++|++++||+++|||+|.+.
T Consensus       339 ~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~  418 (478)
T cd07131         339 EGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNK  418 (478)
T ss_pred             CCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHH
Confidence             67999998653     358899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++++++|+|+||+++.+ ..+.+||||+|.||+| +++|.+|+++|++.|+|.+.
T Consensus       419 a~~~~~~l~~G~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07131         419 AFRARRDLEAGITYVNAPTIG-AEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD  476 (478)
T ss_pred             HHHHHHhcCccEEEECCCCCC-CCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence            999999999999999997653 4578999999999999 78899999999999999764

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=7.1e-87  Score=695.93  Aligned_cols=434  Identities=24%  Similarity=0.401  Sum_probs=400.3

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus         8 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~   86 (452)
T cd07147           8 TGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDAR-GEVARAI   86 (452)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            457899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCcccc-ccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKT-SITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      +.++++++.+..+........ .....+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~  166 (452)
T cd07147          87 DTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSA  166 (452)
T ss_pred             HHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHH
Confidence            999999988876642211100 000123356678899999999999999987      8999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .++.+++.++ +|+|+||+++++.+.+..|+.|+ +|.|+||||+++|+.|.+.++.  +|+++|+|||||+||++|||+
T Consensus       167 ~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelgG~~p~iV~~dadl  244 (452)
T cd07147         167 LILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELGGNAAVIVDSDADL  244 (452)
T ss_pred             HHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecCCCCcEEECCCCCH
Confidence            9999999998 99999999999777888999986 9999999999999999997763  799999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      |.|++.+++++| +|+||.|+++++||||++++|+|+++|++++.++++|||.+ ++.+||++++.+.+++.++++++.+
T Consensus       245 ~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~  323 (452)
T cd07147         245 DFAAQRIIFGAF-YQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVD  323 (452)
T ss_pred             HHHHHHHHHHHH-hccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999999864


Q ss_pred             -CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397          314 -SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV  392 (487)
Q Consensus       314 -~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~  392 (487)
                       ++++++||..  +|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|++++||+++|||+|.+.+++++
T Consensus       324 ~Ga~~l~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~  401 (452)
T cd07147         324 AGAKLLTGGKR--DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAW  401 (452)
T ss_pred             CCCEEEecCCc--CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence             6799999875  4889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      +++++|+|+||+.+. ...+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus       402 ~~~~~G~v~vN~~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~  452 (452)
T cd07147         402 DELEVGGVVINDVPT-FRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI  452 (452)
T ss_pred             HHcCcceEEECCCCC-CCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence            999999999999763 335679999999999999999999999999999863

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=6.7e-87  Score=696.28  Aligned_cols=432  Identities=25%  Similarity=0.405  Sum_probs=402.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||+.++. .|+..++
T Consensus         8 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~   86 (451)
T cd07150           8 DGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAW-FETTFTP   86 (451)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence            567899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++...+....... .  ....+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        87 ~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~  163 (451)
T cd07150          87 ELLRAAAGECRRVRGETL-P--SDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGL  163 (451)
T ss_pred             HHHHHHHHHHHHhcCccc-c--CCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHH
Confidence            999999887765432111 1  01123356789999999999999999997      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       164 ~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl  243 (451)
T cd07150         164 KIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLADADL  243 (451)
T ss_pred             HHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCCCh
Confidence            999999998 99999999998 567788999986 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      |.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++.+++|+|.+ ++++||++++.+.+++.++++++..
T Consensus       244 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~  322 (451)
T cd07150         244 DYAVRAAAFGAF-MHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVA  322 (451)
T ss_pred             HHHHHHHHHHHH-hhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence            999999999999 99999999999999999999999999999999999999988 7999999999999999999999874


Q ss_pred             -CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397          314 -SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV  392 (487)
Q Consensus       314 -~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~  392 (487)
                       ++++++||..  +|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|++++||+++|||+|.+.+++++
T Consensus       323 ~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~  400 (451)
T cd07150         323 KGAKLLTGGKY--DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLA  400 (451)
T ss_pred             CCCEEEeCCcc--CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHH
Confidence             6799999864  4899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +++++|.|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus       401 ~~l~~G~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~  450 (451)
T cd07150         401 ERLESGMVHINDPTIL-DEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT  450 (451)
T ss_pred             HhcCcCEEEECCCCCC-CCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence            9999999999998653 4578999999999999999999999999999885

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=9.5e-87  Score=698.48  Aligned_cols=433  Identities=29%  Similarity=0.406  Sum_probs=400.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCC--CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGK--TKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~--~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.+.+++++.++.++++.++++|++|++.|+  .++.++|.++|+++++.|.+++++|++++++|+|||..++...|+..
T Consensus        28 t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~  107 (476)
T cd07091          28 TEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVAL  107 (476)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999855  99999999999999999999999999999999999987665479999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.++++++..+..... ...   ...+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       108 ~~~~~~~~a~~~~~~~~~-~~~---~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~  183 (476)
T cd07091         108 SIKCLRYYAGWADKIQGK-TIP---IDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS  183 (476)
T ss_pred             HHHHHHHHHHHHHHhcCc-ccc---CCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHH
Confidence            999999998766544321 111   1123356789999999999999999998      799999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc-cccceeeecCCCCcEEEcCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~-~~~p~~~e~gG~~p~iV~~d  231 (487)
                      +..+.+++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|+||||+.+|+.|++.++. +++|+++|+|||||+||++|
T Consensus       184 ~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~d  263 (476)
T cd07091         184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDD  263 (476)
T ss_pred             HHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECCC
Confidence            99999999998 99999999998 566788999996 9999999999999999999987 89999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.+++++
T Consensus       264 ADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~  342 (476)
T cd07091         264 ADLDKAVEWAAFGIF-FNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIES  342 (476)
T ss_pred             CCHHHHHHHHHHHHH-hccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999988 8999999999999999999999


Q ss_pred             HHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          311 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       311 a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      +.. ++++++||..+ ..|+|++|||+.++++++++++||+||||++|++|+|++||++++|++++||+++|||+|.+.+
T Consensus       343 a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~  422 (476)
T cd07091         343 GKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKA  422 (476)
T ss_pred             HHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence            875 67999999764 3689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +++++++++|+|+||+++  ...+.+||||+|.||+|+++|.+|+++|++.|++.
T Consensus       423 ~~~~~~l~~g~v~iN~~~--~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~  475 (476)
T cd07091         423 LRVSRALKAGTVWVNTYN--VFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT  475 (476)
T ss_pred             HHHHHhcCcceEEECCCC--CCCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence            999999999999999864  35678999999999999999999999999999875

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=8.2e-87  Score=695.51  Aligned_cols=433  Identities=25%  Similarity=0.387  Sum_probs=403.1

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.|.+++++.++.+|+++++++|++||+  .|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..
T Consensus        11 t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   90 (462)
T cd07112          11 TGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISDALAVDVPS   90 (462)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence            4678999999999999999999999998  49999999999999999999999999999999999999999987459999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.++++++.++++..... .   .......++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~  166 (462)
T cd07112          91 AANTFRWYAEAIDKVYGEVA-P---TGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLT  166 (462)
T ss_pred             HHHHHHHHHHHHHHhcCcee-c---CCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHH
Confidence            99999999998887653211 1   1122356789999999999999999998      799999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh-ccccceeeecCCCCcEEEcCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~-~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      +..+++++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|.||||+++|+.|++.++ .++||+++|+||+||+||++|
T Consensus       167 ~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~d  246 (462)
T cd07112         167 ALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFAD  246 (462)
T ss_pred             HHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEECCC
Confidence            99999999998 99999999999 567888999986 999999999999999999888 489999999999999999999


Q ss_pred             C-CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          232 I-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       232 a-Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      | |++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+
T Consensus       247 a~dl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~  325 (462)
T cd07112         247 APDLDAAAEAAAAGIF-WNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIE  325 (462)
T ss_pred             CcCHHHHHHHHHHHHH-hccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence            9 99999999999999 99999999999999999999999999999999999999999 899999999999999999999


Q ss_pred             HHHc-CCeEeeCCccCC---CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCH
Q 011397          310 DDKV-SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK  385 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  385 (487)
                      ++++ ++++++||....   +|+|+.|||+.++++++++++||+||||++|++|+|.+|||+++|++++||+++|||+|.
T Consensus       326 ~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~  405 (462)
T cd07112         326 SGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDL  405 (462)
T ss_pred             HHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCH
Confidence            9874 679999987542   588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       386 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +.+.++++++++|+|+||+...  ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus       406 ~~~~~~~~~l~~g~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~  461 (462)
T cd07112         406 SRAHRVARRLRAGTVWVNCFDE--GDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW  461 (462)
T ss_pred             HHHHHHHHhcCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence            9999999999999999998643  4678999999999999999999999999999875

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=1.4e-86  Score=693.98  Aligned_cols=433  Identities=27%  Similarity=0.435  Sum_probs=400.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|.++.++|++++++|+|||..+++ .|+..++
T Consensus         8 t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~   86 (453)
T cd07094           8 DGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR-VEVDRAI   86 (453)
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccc-cCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSIT-TFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      +.++++++.+.++........... ..+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        87 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~  166 (453)
T cd07094          87 DTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSA  166 (453)
T ss_pred             HHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHH
Confidence            999999998887753211111000 012356778999999999999999977      8999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      ..+++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|+||||+++|+.|.+.+  +++|+++|+|||||+||++|||
T Consensus       167 ~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~iV~~dad  244 (453)
T cd07094         167 LELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVIVDRDAD  244 (453)
T ss_pred             HHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceEECCCCC
Confidence            9999999997 999999999994 45689999997 99999999999999999887  6799999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      ++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++.
T Consensus       245 l~~aa~~i~~~~~-~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~  323 (453)
T cd07094         245 LDAAIEALAKGGF-YHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAV  323 (453)
T ss_pred             HHHHHHHHHHHHH-HhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999988 899999999999999999999987


Q ss_pred             c-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          313 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       313 ~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      + ++++++||..  +|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.++++
T Consensus       324 ~~Ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~  401 (453)
T cd07094         324 EAGARLLCGGER--DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKA  401 (453)
T ss_pred             HCCCEEEeCccC--CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHH
Confidence            5 6799999864  588999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++++++|+|+||+++. ...+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus       402 ~~~l~~g~v~iN~~~~-~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~  452 (453)
T cd07094         402 AEKLEVGGVMVNDSSA-FRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV  452 (453)
T ss_pred             HHhcCcCeEEEcCCCC-CCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence            9999999999999754 34578999999999999999999999999999985

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=100.00  E-value=1.9e-86  Score=700.39  Aligned_cols=435  Identities=21%  Similarity=0.316  Sum_probs=405.3

Q ss_pred             chhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHH
Q 011397            5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT   84 (487)
Q Consensus         5 ~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~   84 (487)
                      .|.+++++..+.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+++
T Consensus        57 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~i~  135 (518)
T cd07125          57 ERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIALAAAEAGKTLADAD-AEVREAID  135 (518)
T ss_pred             CceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999999999999999998 79999999


Q ss_pred             HHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHH
Q 011397           85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSL  158 (487)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~  158 (487)
                      .++++++.++++.......   ...+.....+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.+
T Consensus       136 ~l~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~  212 (518)
T cd07125         136 FCRYYAAQARELFSDPELP---GPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAAR  212 (518)
T ss_pred             HHHHHHHHHHHhcCCcccc---CCCCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHH
Confidence            9999999888876443211   1123456789999999999999999987      899999999999999999999999


Q ss_pred             HHHHHhhh-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcc---ccceeeecCCCCcEEEcCCC
Q 011397          159 LAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       159 l~~~l~~a-lP~g~v~~v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~---~~p~~~e~gG~~p~iV~~da  232 (487)
                      +++++.++ +|+|++|+++|+. +.+..|+.|+ +|.|+||||+++|+.|++.++++   ++|+++|+|||||+||++||
T Consensus       213 l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dA  292 (518)
T cd07125         213 AVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTA  292 (518)
T ss_pred             HHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCC
Confidence            99999998 9999999999955 4788999986 99999999999999999988855   79999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |++.|++.+++++| +|+||.|+++++||||++++|+|+++|++++.++++|||.+ ++++||++++.+++++.++++++
T Consensus       293 Dl~~Aa~~iv~g~f-~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a  371 (518)
T cd07125         293 LPEQAVKDVVQSAF-GSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELM  371 (518)
T ss_pred             CHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999998 89999999999999999999998


Q ss_pred             HcCCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          312 KVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       312 ~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      ..++++++||..+. +|+|+.|||+.++  +|++++||+||||++|++|+  |++|||+++|+++|||++||||+|.+.+
T Consensus       372 ~~~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~  449 (518)
T cd07125         372 RGEAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREI  449 (518)
T ss_pred             HhCCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHH
Confidence            87789999987643 6899999999887  89999999999999999999  9999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEeC
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~-~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++++++|+|+||+++.+...+.+||||+|.||+|+ .+|.+++++|++.|+|.+..
T Consensus       450 ~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~  508 (518)
T cd07125         450 EYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNT  508 (518)
T ss_pred             HHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEc
Confidence            99999999999999997765556779999999999995 68899999999999998764

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=2.4e-86  Score=691.97  Aligned_cols=435  Identities=23%  Similarity=0.368  Sum_probs=403.0

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      ++.|.+++++.++.+|++++++.|++|++.|+.++.++|.++|+++++.|.+++++|++++++|+|||..++...|+..+
T Consensus         5 ~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~   84 (450)
T cd07092           5 ATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGA   84 (450)
T ss_pred             CCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999999999999999999999999999999999987754699999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.+++++...+.........   .......+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        85 i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~  161 (450)
T cd07092          85 VDNFRFFAGAARTLEGPAAGE---YLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTT  161 (450)
T ss_pred             HHHHHHHHHHHHHhcCcccCc---cCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence            999999987765543211100   0112356789999999999999999987      8999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          157 SLLAKLVGEYMDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       157 ~~l~~~l~~alP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ..+.+++.+.+|+|++|+++|+ .+.++.|+.|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       162 ~~l~~~~~~glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dAdl  241 (450)
T cd07092         162 LLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDADL  241 (450)
T ss_pred             HHHHHHHHhcCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCH
Confidence            9999999989999999999984 45788999996 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      |.|++.+++|+| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++.+||++++.+.+++.++++++.+
T Consensus       242 ~~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~~  320 (450)
T cd07092         242 DAAVAGIATAGY-YNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPA  320 (450)
T ss_pred             HHHHHHHHHHHH-hhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHc
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999999887


Q ss_pred             CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397          314 SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV  392 (487)
Q Consensus       314 ~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~  392 (487)
                      ++++++||... ..|+|+.|||+.+++++++++++|+||||++|++|+|+||||+++|++++||+++|||+|.+.+++++
T Consensus       321 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~  400 (450)
T cd07092         321 HARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLS  400 (450)
T ss_pred             CCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence            88999999754 36899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus       401 ~~l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~  449 (450)
T cd07092         401 ARLDFGTVWVNTHIP--LAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM  449 (450)
T ss_pred             HhcCccEEEECCCCC--CCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence            999999999998764  4578999999999999999999999999999874

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=2.3e-86  Score=695.34  Aligned_cols=434  Identities=21%  Similarity=0.317  Sum_probs=398.2

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+++++++++|++||+.|+.+|.++|.++|++++++|++++++|+++++.|+|||..+++ .|+..++
T Consensus        24 t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  102 (487)
T PRK09457         24 SGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAA-TEVTAMI  102 (487)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            457889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+..+......    .......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       103 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~  178 (487)
T PRK09457        103 NKIAISIQAYHERTGEKRS----EMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE  178 (487)
T ss_pred             HHHHHHHHHHHHhcCceec----cCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence            9999988877766432211    1123356788999999999999999986      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcc-ccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~-~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++++++.++ +|+|++|+|+|+.+.+..|+.|+ +|.|.||||+++|+.|++.++.+ .+++++|+|||||+||++|||+
T Consensus       179 ~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl  258 (487)
T PRK09457        179 LTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADI  258 (487)
T ss_pred             HHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCH
Confidence            999999998 99999999999878899999996 99999999999999999987755 5788999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcH-HHHHHHHHHHHhhhcCCCCC-C-CCcccccCCHHHHHHHHHHHHHH
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNPL-E-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~-~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      +.|++.+++++| .|+||.|+++++||||++++ |+|+++|+++++++++|||. + .+++||+++..+++++.++++++
T Consensus       259 ~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a  337 (487)
T PRK09457        259 DAAVHLIIQSAF-ISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQL  337 (487)
T ss_pred             HHHHHHHHHHHh-hccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999998 99999999999999999996 4 78999999999999999999998


Q ss_pred             Hc-CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          312 KV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       312 ~~-~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                      .. ++++++||.. +++|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++
T Consensus       338 ~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~  416 (487)
T PRK09457        338 LALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYD  416 (487)
T ss_pred             HHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence            75 7888888754 345799999999 69999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++|+|+||+...+ ..+.+||||+|.||+|+++|..+ .+|++.|++....
T Consensus       417 ~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~  471 (487)
T PRK09457        417 QFLLEIRAGIVNWNKPLTG-ASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLES  471 (487)
T ss_pred             HHHHhCCcceEEEECCCCC-CCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEec
Confidence            9999999999999987654 45679999999999999999555 5599999988774

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=2.1e-86  Score=695.24  Aligned_cols=433  Identities=24%  Similarity=0.395  Sum_probs=401.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus        22 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~  100 (468)
T cd07088          22 TGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLSLAR-VEVEFTA  100 (468)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++.......... ..  ....+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       101 ~~l~~~~~~a~~~~~~~-~~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~  177 (468)
T cd07088         101 DYIDYMAEWARRIEGEI-IP--SDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNAL  177 (468)
T ss_pred             HHHHHHHHHHHHhCCcc-cc--CccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence            99999987766543211 11  11113356788999999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .+++++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       178 ~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl  257 (468)
T cd07088         178 EFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAIVMKDADL  257 (468)
T ss_pred             HHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCH
Confidence            999999998 999999999995 45788899996 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++.+||++++.+.+++.++++++..
T Consensus       258 ~~aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~  336 (468)
T cd07088         258 DLAVKAIVDSRI-INCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVE  336 (468)
T ss_pred             HHHHHHHHHHHh-cccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999988 8899999999999999999999864


Q ss_pred             -CCeEeeCCccCC--CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 011397          314 -SGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ  390 (487)
Q Consensus       314 -~~~~~~gg~~~~--~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~  390 (487)
                       ++++++||..++  +|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|++++||+++|||+|.+.+++
T Consensus       337 ~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~  416 (468)
T cd07088         337 AGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMR  416 (468)
T ss_pred             CCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence             779999997643  58999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          391 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       391 ~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +++++++|+|+||++..+  .+..||||+|.||+|+++|++++++||+.|+|.
T Consensus       417 ~~~~l~~g~v~iN~~~~~--~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~  467 (468)
T cd07088         417 ATNELEFGETYINRENFE--AMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY  467 (468)
T ss_pred             HHHhCCcceEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence            999999999999997643  345699999999999999999999999999885

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=1.8e-86  Score=693.44  Aligned_cols=432  Identities=25%  Similarity=0.379  Sum_probs=399.1

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCc-chhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE-LESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~~~ev~~~   82 (487)
                      +.+.+++++..+.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||. .+++ .|+..+
T Consensus         6 t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~-~ev~~~   84 (457)
T cd07108           6 TGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR-PEAAVL   84 (457)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH-HHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999997 6887 899999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.+++++.....+ ......   .......+..++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        85 ~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~  160 (457)
T cd07108          85 ADLFRYFGGLAGEL-KGETLP---FGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAV  160 (457)
T ss_pred             HHHHHHHHHHHHHh-CCceec---cCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHH
Confidence            99999888765443 222211   1122355788999999999999999998      6999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          157 SLLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       157 ~~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .++.+++.+++|+|++|+++| +.+.++.|+.|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       161 ~~l~~~~~~~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dAdl  240 (457)
T cd07108         161 LLLAEILAQVLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDADL  240 (457)
T ss_pred             HHHHHHHHHhCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCCCH
Confidence            999999999999999999998 567788999996 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHh-cccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          235 KVACRRMIMGK-WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       235 ~~aa~~i~~~~-~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      +.|++.+++++ | .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++.+||++++.+.+++.++++++.
T Consensus       241 ~~Aa~~iv~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~  319 (457)
T cd07108         241 DDAVDGAIAGMRF-TRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGL  319 (457)
T ss_pred             HHHHHHHHHhhHh-hcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence            99999999995 9 99999999999999999999999999999999999999988 899999999999999999999986


Q ss_pred             c--CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCH
Q 011397          313 V--SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK  385 (487)
Q Consensus       313 ~--~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  385 (487)
                      .  ++++++||..+     .+|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.
T Consensus       320 ~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~  399 (457)
T cd07108         320 STSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDL  399 (457)
T ss_pred             hCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCH
Confidence            4  78999999753     3589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHH-HHHhhhccEEE
Q 011397          386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFS-FDVFSHKKAVL  443 (487)
Q Consensus       386 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~-l~~~~~~k~v~  443 (487)
                      +.++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.++ +++|++.|+|.
T Consensus       400 ~~a~~~~~~l~~g~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~  456 (457)
T cd07108         400 GRALRAAHALEAGWVQVNQGGG--QQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN  456 (457)
T ss_pred             HHHHHHHHhcCcceEEECCCCC--CCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence            9999999999999999999754  46789999999999999999977 69999999875

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=2.6e-86  Score=685.49  Aligned_cols=421  Identities=38%  Similarity=0.675  Sum_probs=387.5

Q ss_pred             HHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCC-cchhhHHHHHHHHHHHHHHHHHHhhhhcC
Q 011397           21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP-ELESSIYEVALLKTSIKSALKELKHWMTP   99 (487)
Q Consensus        21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~~~ev~~~~~~l~~~~~~~~~~~~~   99 (487)
                      ..+++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+ ..++...|+..+++.++++++.+..+.++
T Consensus         2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~   81 (434)
T cd07133           2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKP   81 (434)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            35788999999999999999999999999999999999999999999985 56775479999999999999988877654


Q ss_pred             CccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcEE
Q 011397          100 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIR  173 (487)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~  173 (487)
                      ..........+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.++.+++.+++|+|++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~alP~g~~~  161 (434)
T cd07133          82 SRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVA  161 (434)
T ss_pred             cccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEE
Confidence            43211111123457889999999999999999986      899999999999999999999999999999999999999


Q ss_pred             EEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCCc
Q 011397          174 VVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQA  253 (487)
Q Consensus       174 ~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~  253 (487)
                      +++|+.+.+..|+.+++|.|+||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| +|+||.
T Consensus       162 ~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~  240 (434)
T cd07133         162 VVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKL-LNAGQT  240 (434)
T ss_pred             EEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHh-ccCCCc
Confidence            9999777888888778999999999999999999999999999999999999999999999999999999999 999999


Q ss_pred             cccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHc-CCeEeeCCccC---CCCce
Q 011397          254 CISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD---KNKLR  329 (487)
Q Consensus       254 C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~---~~g~~  329 (487)
                      |+++++||||++++|+|+++|+++++++++|+ .+++++||++++.+++++.+++++++. ++++++||...   .+|+|
T Consensus       241 C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~-~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~  319 (434)
T cd07133         241 CVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRK  319 (434)
T ss_pred             ccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC-CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcE
Confidence            99999999999999999999999999999886 458899999999999999999999864 77999988653   35899


Q ss_pred             eecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCcccc
Q 011397          330 IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHL  409 (487)
Q Consensus       330 ~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~  409 (487)
                      ++|||+.++++++++++||+||||++|++|+|.+|||+++|++++||++||||+|.+.++++++++++|.|+||+++.+.
T Consensus       320 ~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~  399 (434)
T cd07133         320 LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHV  399 (434)
T ss_pred             EeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999976555


Q ss_pred             CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          410 AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       410 ~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ..+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus       400 ~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~  433 (434)
T cd07133         400 AQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF  433 (434)
T ss_pred             CCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence            6688999999999999999999999999999874

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=2.5e-86  Score=692.12  Aligned_cols=421  Identities=26%  Similarity=0.389  Sum_probs=393.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus        46 t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~  125 (480)
T cd07111          46 TGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVA  125 (480)
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999755899888


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++....+...              .....++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       126 ~~~~~~~~~~~~~~--------------~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~  191 (480)
T cd07111         126 RHFYHHAGWAQLLD--------------TELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTAL  191 (480)
T ss_pred             HHHHHHHHHHHHhc--------------CCcccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence            88887755443221              12345799999999999999998      79999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      .+++++.++ +|+|++|+|+|+.+.+..|+.|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++|||+|
T Consensus       192 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~  271 (480)
T cd07111         192 LFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLD  271 (480)
T ss_pred             HHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHH
Confidence            999999998 99999999999767888999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++.. 
T Consensus       272 ~aa~~i~~~~f-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~  350 (480)
T cd07111         272 SAVEGIVDAIW-FNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAE  350 (480)
T ss_pred             HHHHHHHHHHH-hcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHC
Confidence            99999999999 99999999999999999999999999999999999999998 8999999999999999999999865 


Q ss_pred             CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397          314 SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV  392 (487)
Q Consensus       314 ~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~  392 (487)
                      ++++++||.. +.+|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.+.+++
T Consensus       351 ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~  430 (480)
T cd07111         351 GADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVA  430 (480)
T ss_pred             CCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence            6788888864 346899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 011397          393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  441 (487)
Q Consensus       393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~  441 (487)
                      +++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++|++.|+
T Consensus       431 ~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~  477 (480)
T cd07111         431 LSLKAGVVWINGHNL--FDAAAGFGGYRESGFGREGGKEGLYEYLRPSW  477 (480)
T ss_pred             HhCCEeeEEECCCCC--CCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence            999999999998654  45678999999999999999999999999885

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-86  Score=693.16  Aligned_cols=435  Identities=22%  Similarity=0.315  Sum_probs=398.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|++++++.|++|+++|+.++..+|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus        40 t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~Ev~~~~  118 (496)
T PLN00412         40 TRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAV-TEVVRSG  118 (496)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            456789999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCcc-ccc-ccc--CCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCCh
Q 011397           84 TSIKSALKELKHWMTPEKA-KTS-ITT--FPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAP  153 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~-~~~-~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~  153 (487)
                      +.++++++++.++...... ... ...  .....+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|
T Consensus       119 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~  198 (496)
T PLN00412        119 DLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGA  198 (496)
T ss_pred             HHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence            9999998887766432111 100 000  11234678999999999999999987      8999999999999999999


Q ss_pred             HHHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcC
Q 011397          154 ASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS  230 (487)
Q Consensus       154 ~~~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~  230 (487)
                      .++..+++++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.|||| .+|+.|++.++  ++|+++|+|||||+||++
T Consensus       199 ~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~~a~--~~~~~lElGG~~p~iV~~  275 (496)
T PLN00412        199 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAG--MVPLQMELGGKDACIVLE  275 (496)
T ss_pred             HHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHHHhC--CCcEEEEcCCCceEEEcC
Confidence            9999999999988 999999999984 57788899997 999999999 99999998875  799999999999999999


Q ss_pred             CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 011397          231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      |||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+++++||+++..+++++.+++++
T Consensus       276 dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gp~i~~~~~~~v~~~i~~  354 (496)
T PLN00412        276 DADLDLAAANIIKGGF-SYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMD  354 (496)
T ss_pred             CCCHHHHHHHHHHHHH-hcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCCcccCCcCCCcCHHHHHHHHHHHHH
Confidence            9999999999999999 999999999999999999999999999999999999999888899999999999999999999


Q ss_pred             HHc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          311 DKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       311 a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                      +.. ++++++||..  +|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|++++||++||||+|.+.++
T Consensus       355 a~~~Ga~~l~~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~  432 (496)
T PLN00412        355 AKEKGATFCQEWKR--EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAI  432 (496)
T ss_pred             HHHCCCEEEecCCC--CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence            875 6788887643  6899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++|+|+||++.. ...+.+||||+|.||+|+++|.+|+++||+.|+++...
T Consensus       433 ~~~~~l~~G~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~  488 (496)
T PLN00412        433 LISDAMETGTVQINSAPA-RGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINL  488 (496)
T ss_pred             HHHHhCCcceEEEcCCCC-CCCCCCCCCCccccccCCCChHHHHHHhcceEEEEEec
Confidence            999999999999999753 34467999999999999999999999999999997653

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=6.1e-86  Score=689.61  Aligned_cols=432  Identities=22%  Similarity=0.312  Sum_probs=394.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+|+++++++|++|+   +.++..+|.++|++++++|++++++|++++++|+|||..+++ .|+..++
T Consensus        26 t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  101 (472)
T TIGR03250        26 NGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKKDSL-YEVGRVA  101 (472)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            468899999999999999999999886   468999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccc-cccCCCcceEeeeec-eEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPF-GVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +.+++++..+..+......... ........++.++|+ |||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       102 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~  181 (472)
T TIGR03250       102 DVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLS  181 (472)
T ss_pred             HHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHH
Confidence            9999999887665321111000 011123567899998 99999999999996      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      +..+.+++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.++  ++|+++|+|||||+||++||
T Consensus       182 ~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~--~~~~~lElGGk~p~iV~~dA  259 (472)
T TIGR03250       182 ALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLELGGNDPLIVMEDA  259 (472)
T ss_pred             HHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc--CCceEEecCCCCeEEECCCC
Confidence            99999999998 99999999998 467889999996 999999999999999998775  68999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++++
T Consensus       260 dl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a  338 (472)
T TIGR03250       260 DLDRAADLAVKGSY-KNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEA  338 (472)
T ss_pred             CHHHHHHHHHHHHH-HhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999988 89999999999999999999998


Q ss_pred             Hc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 011397          312 KV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ  390 (487)
Q Consensus       312 ~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~  390 (487)
                      .. ++++++||..  +|+|++|||+.+++++|++++||+||||++|++|+|.+||++++|++++||++||||+|.+.+.+
T Consensus       339 ~~~Ga~vl~gg~~--~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~  416 (472)
T TIGR03250       339 IAQGARLLLGNVR--DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITR  416 (472)
T ss_pred             HHCCCEEEECCCc--CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHH
Confidence            65 6799999865  58999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 011397          391 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       391 ~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +++++++|+|+||+.+. ...+.+||||+|.||+| +.+|.+++++|++.|++.++
T Consensus       417 ~~~~l~~G~v~iN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~  471 (472)
T TIGR03250       417 FIAELQVGTVNVWEVPG-YRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLP  471 (472)
T ss_pred             HHHHCCcceEEEcCCCC-CCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEe
Confidence            99999999999998653 33456999999999999 56778999999999998765

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=8.3e-86  Score=681.47  Aligned_cols=422  Identities=43%  Similarity=0.736  Sum_probs=391.0

Q ss_pred             HHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcCC
Q 011397           21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE  100 (487)
Q Consensus        21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~  100 (487)
                      +++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||..++...|+..+++.+++++..+..+....
T Consensus         2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~   81 (433)
T cd07134           2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK   81 (433)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            57899999999999999999999999999999999999999999999999999865799999999999998877665433


Q ss_pred             ccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcEEE
Q 011397          101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV  174 (487)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~~  174 (487)
                      .........+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.++.+++.+++|+|++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a~p~g~v~~  161 (433)
T cd07134          82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAV  161 (433)
T ss_pred             ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCEEEE
Confidence            2211111123356899999999999999999997      7999999999999999999999999999999999999999


Q ss_pred             EeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCCcc
Q 011397          175 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC  254 (487)
Q Consensus       175 v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C  254 (487)
                      ++|+.+.+..|++|++|.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| +++||.|
T Consensus       162 v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~-~~~GQ~C  240 (433)
T cd07134         162 FEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKF-LNAGQTC  240 (433)
T ss_pred             EeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhh-cCcCCcc
Confidence            999878889999999999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             ccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCC-CC-CCcccccCCHHHHHHHHHHHHHHH-cCCeEeeCCccCCCCceee
Q 011397          255 ISPDHIITTKDYAPKLLESLKNELENFYGKNP-LE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDKNKLRIA  331 (487)
Q Consensus       255 ~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~-~~~~gpl~~~~~~~~~~~~i~~a~-~~~~~~~gg~~~~~g~~~~  331 (487)
                      +++++||||++++|+|+++|+++++.+..++| .+ .+++||++++.+.+++.++++++. +++++++||..+.+|+|++
T Consensus       241 ~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~g~~~~  320 (433)
T cd07134         241 IAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRYIA  320 (433)
T ss_pred             cCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCEEe
Confidence            99999999999999999999999999988886 55 889999999999999999999986 4789999998765689999


Q ss_pred             cEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCC
Q 011397          332 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV  411 (487)
Q Consensus       332 Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~  411 (487)
                      |||+.++++++++++||+||||++|++|+|.+|||+++|++++||+++|||+|.+.++++++++++|.|+||+.+.+...
T Consensus       321 Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~  400 (433)
T cd07134         321 PTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLN  400 (433)
T ss_pred             eEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999997655556


Q ss_pred             CCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          412 HSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       412 ~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus       401 ~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  432 (433)
T cd07134         401 PNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL  432 (433)
T ss_pred             CCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence            78999999999999999999999999999875

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=1e-85  Score=687.68  Aligned_cols=433  Identities=26%  Similarity=0.410  Sum_probs=400.9

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.+.+++++.++.++++.++++|++|++  .|+.+|.++|.++|++++++|.+++++|++++++|+|||..++. .|+..
T Consensus         6 tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~   84 (457)
T cd07114           6 TGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR-AQVRY   84 (457)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHH
Confidence            5688999999999999999999999997  49999999999999999999999999999999999999999998 89999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.+++++...+.... ...  .....+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus        85 ~~~~~~~~a~~~~~~~~-~~~--~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~  161 (457)
T cd07114          85 LAEWYRYYAGLADKIEG-AVI--PVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPAS  161 (457)
T ss_pred             HHHHHHHHHHHHHHhcC-ccc--ccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHH
Confidence            99999998876554322 111  111123356789999999999999999997      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      +..+++++.++ +|+|+||+++| +.+.+..|+.|+ +|.|+||||+++|+.+.+.+++++||+++|+|||||+||++||
T Consensus       162 ~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dA  241 (457)
T cd07114         162 TLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDDA  241 (457)
T ss_pred             HHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCCC
Confidence            99999999998 99999999999 456788899996 9999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |++.|++.|++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++
T Consensus       242 dl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a  320 (457)
T cd07114         242 DLDAAVNGVVAGIF-AAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARA  320 (457)
T ss_pred             CHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999999 89999999999999999999998


Q ss_pred             Hc-CCeEeeCCccCC-----CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCH
Q 011397          312 KV-SGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK  385 (487)
Q Consensus       312 ~~-~~~~~~gg~~~~-----~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  385 (487)
                      .. ++++++||....     .|+|++|||+.+++++++++++|+||||++|++|+|.||||+++|++++||+++|||+|.
T Consensus       321 ~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~  400 (457)
T cd07114         321 REEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDL  400 (457)
T ss_pred             HHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCH
Confidence            65 678999987532     579999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       386 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +.++++++++++|+|+||+...  ..+.+||||+|.||+|+++|.+++++|++.|++.
T Consensus       401 ~~~~~~~~~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~  456 (457)
T cd07114         401 ARAHRVARAIEAGTVWVNTYRA--LSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW  456 (457)
T ss_pred             HHHHHHHHhcCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence            9999999999999999998653  4678999999999999999999999999999875

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=2.5e-87  Score=700.78  Aligned_cols=432  Identities=31%  Similarity=0.521  Sum_probs=402.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|++.++++|++|++.|+.++..+|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++
T Consensus        16 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~   94 (462)
T PF00171_consen   16 TGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIAEAR-GEVDRAI   94 (462)
T ss_dssp             TECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHH-HHHHHHH
T ss_pred             CcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccccccccccc-chhhhhh
Confidence            578899999999999999999999999999999999999999999999999999999999999999999999 6999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.++.+.. +....   ..+....+.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        95 ~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~  170 (462)
T PF00171_consen   95 DFLRYYADAARKLAG-EVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTAL  170 (462)
T ss_dssp             HHHHHHHHHHHHHTE-EEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHH
T ss_pred             hhhhhhhhcccceeh-hhccc---ccccccccccccccceeecccccccccccccchhhhhcccccceeeeccccccccc
Confidence            999999999888443 32211   244588899999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++++++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+++|+.|.+.++++++|+++|+|||||+||++|||+
T Consensus       171 ~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~daDl  250 (462)
T PF00171_consen  171 LLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGGKNPVIVDPDADL  250 (462)
T ss_dssp             HHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECEEEEEEE-TTSHH
T ss_pred             cchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccccceeeEeccccc
Confidence            999999997 99999999999 678899999996 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      |.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||+++..+.+++.++++++..
T Consensus       251 d~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~  329 (462)
T PF00171_consen  251 DKAAEAIVRGAF-FNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVA  329 (462)
T ss_dssp             HHHHHHHHHHHH-GGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHH
T ss_pred             ccccccccchhc-ccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhhhcccccccccc
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999999975


Q ss_pred             -CCeEeeCC----ccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          314 -SGKIVHGG----ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       314 -~~~~~~gg----~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                       ++++++||    .....|+|++|||+.+++++|+++++|+||||++|++|+|++||++++|++++||+++|||+|.+.+
T Consensus       330 ~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~  409 (462)
T PF00171_consen  330 EGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRA  409 (462)
T ss_dssp             TTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCceeEEeccccccc
Confidence             78999998    2345789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  442 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v  442 (487)
                      +++++++++|+|+||+++.+.... +||||+|.||+|+++|.+|+++|++.|+|
T Consensus       410 ~~~~~~l~~g~v~iN~~~~~~~~~-~pfgG~~~SG~G~~~g~~~l~~~~~~k~V  462 (462)
T PF00171_consen  410 ERLARRLEAGRVWINDPPTGDPDG-LPFGGFKQSGIGREGGPEGLDEFTQIKTV  462 (462)
T ss_dssp             HHHHHHSTSSEEEESSSSTGGTTS-SEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred             ccccccccccceeecCCccccccc-CCCCCcccccCCcchHHHHHHHhCCccCC
Confidence            999999999999999987654444 89999999999999999999999999986

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=1.6e-85  Score=688.50  Aligned_cols=435  Identities=21%  Similarity=0.313  Sum_probs=401.2

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|.+++++|+++++.|+|||..+++ .|+..++
T Consensus        25 t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~i  103 (477)
T TIGR01722        25 TNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGL  103 (477)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHH
Confidence            457889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++........ .....  .......+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       104 ~~~~~~~~~~~~~~g-~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~  180 (477)
T TIGR01722       104 EVVEHACGVNSLLKG-ETSTQ--VATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAV  180 (477)
T ss_pred             HHHHHHHHHHHHhcC-ccccc--CCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHH
Confidence            999998876554332 21110  1112345778999999999999999987      69999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      .+.+++.++ +|+|++|+|+|+.+.+..|++|+ +|.|+||||+++|+.|.+.++.++||+++|+||+||+||++|||+|
T Consensus       181 ~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v~lElGG~n~~iV~~dADl~  260 (477)
T TIGR01722       181 KLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMPDADKD  260 (477)
T ss_pred             HHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCceEECCCCCHH
Confidence            999999998 99999999999777889999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| .|+||.|+++++||||+++ |+|+++|+++++++++|+|.+ .++|||++++.+++++.++++++.+ 
T Consensus       261 ~a~~~i~~~~f-~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~  338 (477)
T TIGR01722       261 AAADALVGAAY-GAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAE  338 (477)
T ss_pred             HHHHHHHHHHH-HhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHC
Confidence            99999999999 9999999999999999999 999999999999999999988 8999999999999999999999864 


Q ss_pred             CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          314 SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       314 ~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      ++++++||...     ++|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.+
T Consensus       339 Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  418 (477)
T TIGR01722       339 GAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAA  418 (477)
T ss_pred             CCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHH
Confidence            67999998752     2589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEe
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g--~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +++++++++|.|+||+... ...+.+||||+|.||+|  +++|.+++++|++.|++++.
T Consensus       419 ~~~~~~l~~g~v~iN~~~~-~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~  476 (477)
T TIGR01722       419 RRFQHEIEVGQVGVNVPIP-VPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR  476 (477)
T ss_pred             HHHHHhCCeeeEEECCCCC-CCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence            9999999999999998543 34578999999999999  57899999999999998765

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=100.00  E-value=2e-85  Score=678.29  Aligned_cols=414  Identities=23%  Similarity=0.345  Sum_probs=383.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhh
Q 011397           18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM   97 (487)
Q Consensus        18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~   97 (487)
                      |+++++++|++|++.|+.+|.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++++++.+..+.
T Consensus         1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~   79 (431)
T cd07095           1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHERT   79 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999999999999999999999999999998 899999999999998887775


Q ss_pred             cCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh-cCCC
Q 011397           98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS  170 (487)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g  170 (487)
                      ......    ..+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.++.+++.++ +|+|
T Consensus        80 ~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g  155 (431)
T cd07095          80 GERATP----MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPG  155 (431)
T ss_pred             CCcccC----CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChh
Confidence            433211    123467889999999999999999997      89999999999999999999999999999997 9999


Q ss_pred             cEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcc-ccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhccc
Q 011397          171 SIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC  248 (487)
Q Consensus       171 ~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~-~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~  248 (487)
                      ++|+++|+.+.+..|++|+ +|.|.||||+++|+.|++.++.+ .+++++|+|||||+||++|||++.|++.+++++| +
T Consensus       156 ~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~-~  234 (431)
T cd07095         156 VLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAF-L  234 (431)
T ss_pred             HheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-H
Confidence            9999999777888999997 99999999999999999987655 6999999999999999999999999999999999 9


Q ss_pred             CCCCccccCCEEEEcCC-cHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-CCeEeeCCccC-
Q 011397          249 NNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD-  324 (487)
Q Consensus       249 ~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~-  324 (487)
                      |+||.|+++++||||++ ++|+|+++|+++++++++|+|.+ ++.+||+++..+.+++.++++++.. ++++++||... 
T Consensus       235 ~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~  314 (431)
T cd07095         235 TAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLV  314 (431)
T ss_pred             hCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCC
Confidence            99999999999999999 99999999999999999999988 7999999999999999999999875 78999998643 


Q ss_pred             CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcC
Q 011397          325 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND  404 (487)
Q Consensus       325 ~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~  404 (487)
                      ++|+|++|||+ +++++|.+++||+||||++|++|+|.+|||+++|++++||+++|||+|.+.++++++++++|+|+||+
T Consensus       315 ~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~  393 (431)
T cd07095         315 AGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNR  393 (431)
T ss_pred             CCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECC
Confidence            46899999999 68999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CccccCCCCCCcccCCCCCCCCcchHHHHHHhhhc
Q 011397          405 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK  439 (487)
Q Consensus       405 ~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~  439 (487)
                      ... ...+.+||||+|.||+|+++|.+|++.|+.+
T Consensus       394 ~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~  427 (431)
T cd07095         394 PTT-GASSTAPFGGVGLSGNHRPSAYYAADYCAYP  427 (431)
T ss_pred             CCC-CCCCCCCCCCcccccCCCCChHHHHHHHhhh
Confidence            654 3456799999999999999999999955543

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=100.00  E-value=3.9e-85  Score=686.11  Aligned_cols=434  Identities=22%  Similarity=0.328  Sum_probs=396.9

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus        22 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  100 (484)
T TIGR03240        22 TQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEVASMI  100 (484)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++.....+......    .......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       101 ~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~  176 (484)
T TIGR03240       101 GKVAISIKAYHERTGESEN----PMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE  176 (484)
T ss_pred             HHHHHHHHHHHHhcCcccc----CCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHH
Confidence            9999988777665322110    1112356788999999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcc-ccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~-~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .+++++.++ +|+|+||+|+|+.+.++.|+.|+ +|.|+||||+++|+.|++.++++ .+|+++|+|||||+||++|||+
T Consensus       177 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl  256 (484)
T TIGR03240       177 ETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADI  256 (484)
T ss_pred             HHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCH
Confidence            999999998 99999999999778889999996 99999999999999999987765 6889999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcH-HHHHHHHHHHHhhhcCCCCC-C-CCcccccCCHHHHHHHHHHHHHH
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNPL-E-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~-~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      +.|++.+++++| +|+||.|+++++||||++++ |+|+++|.++++++++|+|. + ++.+||+++..+++++.++++++
T Consensus       257 ~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a  335 (484)
T TIGR03240       257 DAAVHLIIQSAF-ISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKL  335 (484)
T ss_pred             HHHHHHHHHHHH-hcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999985 99999999999999999973 4 78999999999999999999998


Q ss_pred             Hc-CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          312 KV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       312 ~~-~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                      .+ ++++++||.. +++++|++|||+ ++++++.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.++
T Consensus       336 ~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~  414 (484)
T TIGR03240       336 LALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYD  414 (484)
T ss_pred             HHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence            65 7888888764 345789999999 58999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++|.|+||+...+ ..+.+||||+|.||+|+++|..+++ |++.|++.++.
T Consensus       415 ~~~~~l~aG~v~iN~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~  469 (484)
T TIGR03240       415 RFLLEIRAGIVNWNKPLTG-ASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA  469 (484)
T ss_pred             HHHHhCCcceEEEECCCCC-CCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence            9999999999999987654 4577999999999999999976666 99999998874

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=100.00  E-value=4.4e-85  Score=683.33  Aligned_cols=434  Identities=26%  Similarity=0.417  Sum_probs=403.1

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      .+.+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+||+..++...|+..+
T Consensus         5 ~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~   84 (455)
T cd07093           5 ATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRDIPRA   84 (455)
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            35778999999999999999999999999999999999999999999999999999999999999999988875699999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.++++++.+.... .....   ...+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        85 i~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~  160 (455)
T cd07093          85 AANFRFFADYILQLD-GESYP---QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTA  160 (455)
T ss_pred             HHHHHHHHHhHHHhC-Ccccc---CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHH
Confidence            999999988776532 11111   1123456788999999999999999987      7999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      ..+.+++.++ +|+|+||+++| +.+.+..|+.|+ +|.|+||||+.+|+.|.+.++++++|+++|+|||||+||++|||
T Consensus       161 ~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dAd  240 (455)
T cd07093         161 WLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADAD  240 (455)
T ss_pred             HHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCCC
Confidence            9999999998 99999999998 567788999997 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      ++.|++.+++++| .++||.|+++++||||++++|+|+++|+++++.+++|+|.+ ++++||++++.+.+++.++++++.
T Consensus       241 l~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~  319 (455)
T cd07093         241 LDRAVDAAVRSSF-SNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELAR  319 (455)
T ss_pred             HHHHHHHHHHHHH-hccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999988 799999999999999999999886


Q ss_pred             -cCCeEeeCCccCC-----CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          313 -VSGKIVHGGERDK-----NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       313 -~~~~~~~gg~~~~-----~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                       .++++++||....     .|+|+.|||+.++++++++++||+||||++|++|+|.+|||+++|++++||+++|||+|.+
T Consensus       320 ~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~  399 (455)
T cd07093         320 AEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG  399 (455)
T ss_pred             HCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence             4779999997542     4899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      .++++++++++|+|+||++..+  .+.+||||+|.||+|+++|.+|+++|++.|++.
T Consensus       400 ~~~~~~~~l~~g~v~iN~~~~~--~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07093         400 RAHRVARRLEAGTVWVNCWLVR--DLRTPFGGVKASGIGREGGDYSLEFYTELKNVC  454 (455)
T ss_pred             HHHHHHHhCCcceEEECCCCCC--CCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence            9999999999999999997653  467999999999999999999999999999875

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=100.00  E-value=5.5e-85  Score=682.19  Aligned_cols=433  Identities=29%  Similarity=0.428  Sum_probs=403.1

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++..+.++++++++.|++|++.|+.+|.++|.++|+++++.|.++.++|+++++.|+|||..+++ .|+..++
T Consensus         6 tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~   84 (451)
T cd07103           6 TGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-GEVDYAA   84 (451)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            457899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++.............   ....+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        85 ~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~  161 (451)
T cd07103          85 SFLEWFAEEARRIYGRTIP---SPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSAL  161 (451)
T ss_pred             HHHHHHHHHHHHhcCcccc---cCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHH
Confidence            9999998776654322111   11123467789999999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .+.++++++ +|+|++|++++ +.+.++.|+.|+ +|.|+||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus       162 ~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl  241 (451)
T cd07103         162 ALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDADL  241 (451)
T ss_pred             HHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCH
Confidence            999999998 99999999999 456788899986 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++|+| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++..
T Consensus       242 ~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~  320 (451)
T cd07103         242 DKAVDGAIASKF-RNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVA  320 (451)
T ss_pred             HHHHHHHHHHHH-HhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999988 8999999999999999999999864


Q ss_pred             -CCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 -SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 -~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                       ++++++||.... +|+|+.|||+.++++++.++++|+||||++|++|+|.+|||+++|++++||+++|||+|.+.++++
T Consensus       321 ~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~  400 (451)
T cd07103         321 KGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRV  400 (451)
T ss_pred             CCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence             679999987653 689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++++++|.|+||+++.  ..+.+||||+|.||+|+++|++++++|++.|++.
T Consensus       401 ~~~l~~g~v~vN~~~~--~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~  450 (451)
T cd07103         401 AEALEAGMVGINTGLI--SDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS  450 (451)
T ss_pred             HHhCCcceEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence            9999999999999764  4578999999999999999999999999999874

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=100.00  E-value=5.8e-85  Score=676.94  Aligned_cols=416  Identities=31%  Similarity=0.489  Sum_probs=385.2

Q ss_pred             HHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhh
Q 011397           18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM   97 (487)
Q Consensus        18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~   97 (487)
                      |+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++++++....+.
T Consensus         1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~   79 (432)
T cd07105           1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG-FNVDLAAGMLREAASLITQII   79 (432)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999999999999999999999988887 799999999999998877652


Q ss_pred             cCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh-cCCC
Q 011397           98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS  170 (487)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g  170 (487)
                      . .....  ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+.+++.++ +|+|
T Consensus        80 ~-~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~g  156 (432)
T cd07105          80 G-GSIPS--DKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKG  156 (432)
T ss_pred             C-eeccc--CCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCC
Confidence            2 11111  1123356788999999999999999987      89999999999999999999999999999998 9999


Q ss_pred             cEEEEeCCh----HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHh
Q 011397          171 SIRVVEGAV----AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK  245 (487)
Q Consensus       171 ~v~~v~g~~----~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~  245 (487)
                      ++|+++|+.    +.+..|++|+ +|.|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++
T Consensus       157 v~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~  236 (432)
T cd07105         157 VLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA  236 (432)
T ss_pred             cEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence            999999742    4678899997 99999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHc-CCeEeeCCccC
Q 011397          246 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERD  324 (487)
Q Consensus       246 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~  324 (487)
                      | +|+||.|+++++||||++++|+|+++|++++.++++|    ++++||++++.+.+++.+++++++. ++++++||..+
T Consensus       237 ~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~  311 (432)
T cd07105         237 F-LNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD  311 (432)
T ss_pred             H-hcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence            9 9999999999999999999999999999999999988    6899999999999999999999864 67999998764


Q ss_pred             --CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEE
Q 011397          325 --KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI  402 (487)
Q Consensus       325 --~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~i  402 (487)
                        ..|+|+.|||+.++++++.+++||+||||++|++|+|.+|||+++|++++||++||||+|.+.++++++++++|+|+|
T Consensus       312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~v  391 (432)
T cd07105         312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHI  391 (432)
T ss_pred             CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEE
Confidence              358999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          403 NDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       403 N~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      |+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|.
T Consensus       392 N~~~~~-~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~  431 (432)
T cd07105         392 NGMTVH-DEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT  431 (432)
T ss_pred             CCCCCC-CCCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence            997644 3578999999999999999999999999999985

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=4.1e-85  Score=684.58  Aligned_cols=433  Identities=18%  Similarity=0.237  Sum_probs=387.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHH-hhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.|.+++++..+ +|+++|+++|++| |+.|+.++.++|.++|+++++.|++++++|+++ +.|+|||+.+++ .|+..+
T Consensus        24 tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~~ea~-~Ev~~~  100 (513)
T cd07128          24 TGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATRRDSW-IDIDGG  100 (513)
T ss_pred             CCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHH-HHHHHH
Confidence            567889999865 8999999999998 799999999999999999999999999999996 899999999998 799999


Q ss_pred             HHHHHHHHHHHhhhhcCCccc--c--ccccC-C-CcceEeeee-ceEEEEEcCCCcchh------hhhhhcCCeEEEeCC
Q 011397           83 KTSIKSALKELKHWMTPEKAK--T--SITTF-P-SSAEIVPEP-FGVVLIISPWNYPFF------VGAIAAGNALVLKPS  149 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~--~--~~~~~-~-~~~~~~~~P-~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps  149 (487)
                      ++.++++++...++.......  .  ..... . ...+++++| +|||++|+|||||+.      ++||++||+||+|||
T Consensus       101 ~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs  180 (513)
T cd07128         101 IGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPA  180 (513)
T ss_pred             HHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECC
Confidence            999999999887765321100  0  00011 1 134678999 599999999999998      899999999999999


Q ss_pred             CCChHHHHHHHHHHhhh--cCCCcEEEEeCChHhHHHHHhC--CCCeEEEecCHHHHHHHHHHH--hccccceeeecCCC
Q 011397          150 EVAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAA--AKHLTPVLLELGGK  223 (487)
Q Consensus       150 ~~~~~~~~~l~~~l~~a--lP~g~v~~v~g~~~~~~~L~~~--~v~~v~ftGs~~~g~~v~~~a--~~~~~p~~~e~gG~  223 (487)
                      +.+|+++.++++++.++  +|+|++|+|+|+..   .+..+  .+|.|.||||+++|+.|++.+  +++++|+++|+|||
T Consensus       181 ~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~---~~~~~l~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGk  257 (513)
T cd07128         181 TATAYLTEAVVKDIVESGLLPEGALQLICGSVG---DLLDHLGEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSL  257 (513)
T ss_pred             CCCCHHHHHHHHHHHHhCCCCCCcEEEecCChH---HHhcccCCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCc
Confidence            99999999999999997  89999999998532   23333  489999999999999999975  47899999999999


Q ss_pred             CcEEEcCCCC-----HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCC
Q 011397          224 SPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVN  297 (487)
Q Consensus       224 ~p~iV~~daD-----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~  297 (487)
                      ||+||++|||     +|.+++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||+++
T Consensus       258 np~IV~~DAd~~~~dld~aa~~iv~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~  336 (513)
T cd07128         258 NAAILGPDATPGTPEFDLFVKEVAREMT-VKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVS  336 (513)
T ss_pred             CcEEECCCCCcchhhHHHHHHHHHHHHH-HhcCCcccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCC
Confidence            9999999999     9999999999999 99999999999999999999999999999999999999988 899999999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEeeCCccC--------CCCceeecEEEecCCCC--CcccccccccceeeeeeeCCHHHHHH
Q 011397          298 SNHFARLSKLLDDDKVSGKIVHGGERD--------KNKLRIAPTLLLDVPRD--SLIMSEEIFGPLLPILTVDKIEDSFD  367 (487)
Q Consensus       298 ~~~~~~~~~~i~~a~~~~~~~~gg~~~--------~~g~~~~Ptv~~~~~~~--~~~~~~E~fgPvl~v~~~~~~~eai~  367 (487)
                      +.+++++.++|+++++++++++||...        .+|+|++|||+.+++++  +.+++||+||||++|++|+|.+|||+
T Consensus       337 ~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~  416 (513)
T cd07128         337 REQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIE  416 (513)
T ss_pred             HHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHH
Confidence            999999999999998669999999642        25899999999988874  89999999999999999999999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHHhcc--eeeEEEcCCcc-------ccCCCCCCcccCCCCCCCCc-chHHHHHHhh
Q 011397          368 IINSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAV-------HLAVHSLPFGGVQESGMGAY-HGKFSFDVFS  437 (487)
Q Consensus       368 ~~n~~~~gl~~~v~t~d~~~~~~~~~~~~--~g~v~iN~~~~-------~~~~~~~pfGG~~~SG~g~~-~g~~~l~~~~  437 (487)
                      ++|+++|||++||||+|.+.+++++++++  +|+|+||+.+.       ....+.+||||+|.||+|++ +|.+++++|+
T Consensus       417 ~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~  496 (513)
T cd07128         417 LAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYM  496 (513)
T ss_pred             HHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhh
Confidence            99999999999999999999999999997  99999998642       12346789999999999999 4799999999


Q ss_pred             hccEEE
Q 011397          438 HKKAVL  443 (487)
Q Consensus       438 ~~k~v~  443 (487)
                      +.|+|.
T Consensus       497 ~~k~v~  502 (513)
T cd07128         497 QRTAVQ  502 (513)
T ss_pred             eeeeee
Confidence            999875

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=1.3e-84  Score=676.34  Aligned_cols=429  Identities=24%  Similarity=0.369  Sum_probs=393.4

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+++++++++|+++   |+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus         8 tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~   83 (451)
T cd07146           8 TGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR-YEVGRAA   83 (451)
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            45789999999999999999999875   8889999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCcccccc--ccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSI--TTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +.++++++....+.. +......  ...+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus        84 ~~l~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~  162 (451)
T cd07146          84 DVLRFAAAEALRDDG-ESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLS  162 (451)
T ss_pred             HHHHHHHHHHHHhcC-cccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHH
Confidence            999999987766532 2111110  0122356788999999999999999997      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      +..+.+++.++ +|+|++|+++| +.+.+..|++|+ +|.|+||||+.+|+.|.+.++  .+|+++|+|||||+||++||
T Consensus       163 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV~~da  240 (451)
T cd07146         163 AIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIVMDDA  240 (451)
T ss_pred             HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEECCCC
Confidence            99999999998 99999999998 456789999996 999999999999999998765  68999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++.+||++++.+++++.++++++
T Consensus       241 Dl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a  319 (451)
T cd07146         241 DLERAATLAVAGSY-ANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEA  319 (451)
T ss_pred             CHHHHHHHHHHHHH-hhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999988 89999999999999999999998


Q ss_pred             Hc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 011397          312 KV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ  390 (487)
Q Consensus       312 ~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~  390 (487)
                      .. ++++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++
T Consensus       320 ~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~  397 (451)
T cd07146         320 IAQGARVLLGNQR--QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKR  397 (451)
T ss_pred             HhCCCEEEeCCCc--CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence            64 7799999864  58999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcceeeEEEcCCccccCCCCCCcccCCCCCC-CCcchHHHHHHhhhccEEE
Q 011397          391 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM-GAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       391 ~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~-g~~~g~~~l~~~~~~k~v~  443 (487)
                      +++++++|+|+||+.+. ...+.+||||+|.||+ |+++|.+|+++|++.|++.
T Consensus       398 ~~~~l~~G~v~iN~~~~-~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~  450 (451)
T cd07146         398 LVERLDVGTVNVNEVPG-FRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS  450 (451)
T ss_pred             HHHHCCcceEEECCCCC-CCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence            99999999999998753 3457899999999995 8999999999999999874

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=100.00  E-value=1.2e-84  Score=672.52  Aligned_cols=418  Identities=52%  Similarity=0.884  Sum_probs=386.6

Q ss_pred             HHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcCC
Q 011397           21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE  100 (487)
Q Consensus        21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~  100 (487)
                      +++++|++||+.|+.+|..+|.++|++++++|++++++|+++++.|+|||..++...|+..+++.++++++.+..+....
T Consensus         2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~   81 (426)
T cd07087           2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR   81 (426)
T ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            48899999999999999999999999999999999999999999999999887764699999999999998887665433


Q ss_pred             ccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcEEE
Q 011397          101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV  174 (487)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~~  174 (487)
                      .........+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.++++++.+++|+|++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~~~P~gv~~v  161 (426)
T cd07087          82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAV  161 (426)
T ss_pred             ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCCCEEEE
Confidence            2211111123467889999999999999999996      8999999999999999999999999999999999999999


Q ss_pred             EeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCCcc
Q 011397          175 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC  254 (487)
Q Consensus       175 v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C  254 (487)
                      ++|+.+.+..|++|++|.|+||||+++|+.|.+.+++++||+++|+|||||+||++|||+|.|++.+++++| .|+||.|
T Consensus       162 v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C  240 (426)
T cd07087         162 VEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKF-LNAGQTC  240 (426)
T ss_pred             EeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHH-hccCCcc
Confidence            999777888999989999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             ccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceeecEE
Q 011397          255 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTL  334 (487)
Q Consensus       255 ~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv  334 (487)
                      +++++||||++++|+|+++|++++++++.++|.+.+++||++++.+.+++.++++++    ++++||..+.+|+|++|||
T Consensus       241 ~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a----~v~~gg~~~~~g~~~~Ptv  316 (426)
T cd07087         241 IAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDG----KVVIGGQVDKEERYIAPTI  316 (426)
T ss_pred             ccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcc----eEEeCCccCCCCCEEeeEE
Confidence            999999999999999999999999999888887789999999999999999999864    8899987655689999999


Q ss_pred             EecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCCCCC
Q 011397          335 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL  414 (487)
Q Consensus       335 ~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~  414 (487)
                      +.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.++++++++++|+|+||+++.+...+.+
T Consensus       317 l~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~  396 (426)
T cd07087         317 LDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNL  396 (426)
T ss_pred             EecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999997655456889


Q ss_pred             CcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          415 PFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       415 pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ||||+|.||+|+++|.+++++|++.|+++
T Consensus       397 PfGG~k~SG~G~~~g~~~l~~~~~~k~~~  425 (426)
T cd07087         397 PFGGVGNSGMGAYHGKAGFDTFSHLKSVL  425 (426)
T ss_pred             CCCCCCcccCCCccCHHHHHHhccceeec
Confidence            99999999999999999999999999874

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=100.00  E-value=2.5e-84  Score=678.94  Aligned_cols=420  Identities=20%  Similarity=0.300  Sum_probs=387.4

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      |++|.+++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus        60 t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~  138 (500)
T TIGR01238        60 DRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAI-AEVREA  138 (500)
T ss_pred             CCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHH
Confidence            3468999999999999999999999999999999999999999999999999999999999999999999998 899999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.++++++..+.+..               ...++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus       139 i~~l~~~a~~~~~~~~---------------~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~  203 (500)
T TIGR01238       139 VDFCRYYAKQVRDVLG---------------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIA  203 (500)
T ss_pred             HHHHHHHHHHHHHhcC---------------ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHH
Confidence            9999999887654421               135799999999999999997      7999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccc---cceeeecCCCCcEEEcC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL---TPVLLELGGKSPVVFDS  230 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~---~p~~~e~gG~~p~iV~~  230 (487)
                      ..+.+++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|+||||+.+|+.|++.+++++   +|+++|+|||||+||++
T Consensus       204 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~  283 (500)
T TIGR01238       204 YRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDS  283 (500)
T ss_pred             HHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECC
Confidence            9999999998 999999999984 57889999986 999999999999999999999876   79999999999999999


Q ss_pred             CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      |||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++
T Consensus       284 dAdld~Aa~~i~~~~f-~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~  362 (500)
T TIGR01238       284 TALPEQVVRDVLRSAF-DSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIE  362 (500)
T ss_pred             CCCHHHHHHHHHHHHH-hcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999988 899999999999999999999


Q ss_pred             HHHc-CCeEeeCCc---c-CCCCceeecEEEecCCCCCcccccccccceeeeeeeC--CHHHHHHHHhcCCCCceEEEec
Q 011397          310 DDKV-SGKIVHGGE---R-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFT  382 (487)
Q Consensus       310 ~a~~-~~~~~~gg~---~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~t  382 (487)
                      ++.+ +++++.++.   . ..+|+|++|||+.+  +++.++++|+||||++|++|+  +++|||+++|++++||+++|||
T Consensus       363 ~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT  440 (500)
T TIGR01238       363 HMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHS  440 (500)
T ss_pred             HHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEe
Confidence            9876 455543322   1 13589999999974  688899999999999999998  7999999999999999999999


Q ss_pred             CCHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccE
Q 011397          383 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKA  441 (487)
Q Consensus       383 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~  441 (487)
                      +|.+.++++++++++|.|+||+...+...+.+||||+|.||+| +++|.+++++|++.|+
T Consensus       441 ~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k~  500 (500)
T TIGR01238       441 RIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQY  500 (500)
T ss_pred             CCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhcC
Confidence            9999999999999999999999765444466899999999999 7999999999999874

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=4.6e-84  Score=675.93  Aligned_cols=433  Identities=26%  Similarity=0.424  Sum_probs=397.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++..+.+++++++++|++|++.|+.++.++|.++|+++++.|.++.++|++++++|+|||..++. .|+..++
T Consensus         8 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~   86 (453)
T cd07149           8 DGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDAR-KEVDRAI   86 (453)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccc-cccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      +.++++++.+..+......... ....+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~  166 (453)
T cd07149          87 ETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSA  166 (453)
T ss_pred             HHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHH
Confidence            9999998877665332111000 00112245778999999999999999996      8999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      .++.+++.++ +|+|++|+++|+ .+.+..|++|+ +|.|+||||+++|+.|++.+.  ++|+++|+|||||+||++|||
T Consensus       167 ~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~iV~~dad  244 (453)
T cd07149         167 LKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIVDADAD  244 (453)
T ss_pred             HHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEEECCCCC
Confidence            9999999998 999999999985 44588999996 999999999999999998864  789999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      ++.|++.+++++| +++||.|+++++||||++++|+|+++|++++..+++|+|.+ ++++||++++.+.+++.++++++.
T Consensus       245 l~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~  323 (453)
T cd07149         245 LEKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAV  323 (453)
T ss_pred             HHHHHHHHHHHHH-HhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999988 899999999999999999999986


Q ss_pred             c-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          313 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       313 ~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      . ++++++||..  +|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|++++||+++|||+|.+.++++
T Consensus       324 ~~ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~  401 (453)
T cd07149         324 EGGARLLTGGKR--DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKA  401 (453)
T ss_pred             HCCCEEEeCCCC--CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHH
Confidence            4 6789999865  488999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++++++|+|+||+++. ...+.+||||+|.||+|+++|.+|+++|++.|+|.
T Consensus       402 ~~~l~~g~v~iN~~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~  452 (453)
T cd07149         402 ARELEVGGVMINDSST-FRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC  452 (453)
T ss_pred             HHHcCcCeEEECCCCC-CCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence            9999999999999764 23467999999999999999999999999999875

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=6e-84  Score=670.90  Aligned_cols=418  Identities=26%  Similarity=0.425  Sum_probs=387.4

Q ss_pred             HHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhh
Q 011397           18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM   97 (487)
Q Consensus        18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~   97 (487)
                      |++++++.|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+||+..++. .|+..+++.+++++....+..
T Consensus         1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~   79 (431)
T cd07104           1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRRPE   79 (431)
T ss_pred             CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999999999999999999999999998 799999999999988765432


Q ss_pred             cCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH-HHHHHHHHhhh-cCC
Q 011397           98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS-SSLLAKLVGEY-MDL  169 (487)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~-~~~l~~~l~~a-lP~  169 (487)
                      . ....  ....+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+ +..+.+++.++ +|+
T Consensus        80 ~-~~~~--~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~  156 (431)
T cd07104          80 G-EILP--SDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPK  156 (431)
T ss_pred             C-cccc--CCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCc
Confidence            1 1111  11123466789999999999999999998      899999999999999999998 57899999998 999


Q ss_pred             CcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcc
Q 011397          170 SSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG  247 (487)
Q Consensus       170 g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~  247 (487)
                      |++|+++++ .+.+..|+.|+ +|.|.||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++| 
T Consensus       157 gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~-  235 (431)
T cd07104         157 GVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAF-  235 (431)
T ss_pred             ccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-
Confidence            999999984 55788999996 999999999999999999999999999999999999999999999999999999999 


Q ss_pred             cCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-CCeEeeCCccCC
Q 011397          248 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK  325 (487)
Q Consensus       248 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~~  325 (487)
                      +|+||.|+++++||||++++|+|+++|++++..+++|+|.+ .+.+||++++.+.+++.++++++.. ++++++||..  
T Consensus       236 ~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~--  313 (431)
T cd07104         236 LHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY--  313 (431)
T ss_pred             hcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC--
Confidence            99999999999999999999999999999999999999988 7899999999999999999998864 7789999864  


Q ss_pred             CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCC
Q 011397          326 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT  405 (487)
Q Consensus       326 ~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~  405 (487)
                      +|+|++|||+.++++++++++||+||||++|++|+|.+|||+++|++++||+++|||+|.+.++++++++++|+|+||++
T Consensus       314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~  393 (431)
T cd07104         314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ  393 (431)
T ss_pred             CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          406 AVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       406 ~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +.+ ..+.+||||+|.||+|+++|.+++++|++.|++.
T Consensus       394 ~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~  430 (431)
T cd07104         394 TVN-DEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT  430 (431)
T ss_pred             CCC-CCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence            754 3578999999999999999999999999999975

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-84  Score=678.15  Aligned_cols=435  Identities=17%  Similarity=0.219  Sum_probs=383.9

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHh-hhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTF-ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.|++++++. +.+|+++|+++|++|+ +.|+.+|..+|.++|++++++|++++++|++++++|+|||+.+++ .|+..+
T Consensus        28 tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~a~-~ev~~~  105 (521)
T PRK11903         28 TGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSA-VDIDGG  105 (521)
T ss_pred             CCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence            4678999997 8899999999999995 999999999999999999999999999999999999999999998 899999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccc--c--cc-CCCcceEeeee-ceEEEEEcCCCcchh------hhhhhcCCeEEEeCCC
Q 011397           83 KTSIKSALKELKHWMTPEKAKTS--I--TT-FPSSAEIVPEP-FGVVLIISPWNYPFF------VGAIAAGNALVLKPSE  150 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~~~P-~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~  150 (487)
                      ++.+++++.....+.........  .  .. ......+.++| +|||++|+|||||+.      ++||++||+||+|||+
T Consensus       106 i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~  185 (521)
T PRK11903        106 IFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPAT  185 (521)
T ss_pred             HHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCC
Confidence            99999999877654321110000  0  00 11134567899 699999999999998      7999999999999999


Q ss_pred             CChHHHHHHHHHHhhh--cCCCcEEEEeCCh-HhHHHHHhCCCCeEEEecCHHHHHHHHHHH--hccccceeeecCCCCc
Q 011397          151 VAPASSSLLAKLVGEY--MDLSSIRVVEGAV-AETSALLDQKWDKICYTGNSRVARIVMAAA--AKHLTPVLLELGGKSP  225 (487)
Q Consensus       151 ~~~~~~~~l~~~l~~a--lP~g~v~~v~g~~-~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a--~~~~~p~~~e~gG~~p  225 (487)
                      .+|.++..+++++.++  +|+|++|+|+|+. +.+..|  ..+|.|.||||+++|+.|++.+  +.+++|+++|+|||||
T Consensus       186 ~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l--~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp  263 (521)
T PRK11903        186 ATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL--QPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNS  263 (521)
T ss_pred             cChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc--cCCCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCc
Confidence            9999999999999886  8999999999844 433333  3499999999999999999864  4789999999999999


Q ss_pred             EEEcCCCC-----HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHH
Q 011397          226 VVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSN  299 (487)
Q Consensus       226 ~iV~~daD-----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~  299 (487)
                      +||++|||     ++.+++.+++++| .|+||.|+++++||||+++||+|+++|+++++++++|||.+ ++++||++++.
T Consensus       264 ~IV~~dAd~~~~~~~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~  342 (521)
T PRK11903        264 ALLGPDAAPGSEAFDLFVKEVVREMT-VKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRA  342 (521)
T ss_pred             eEEccCCcccchhHHHHHHHHHHHHH-hccCCCccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHH
Confidence            99999999     5999999999999 99999999999999999999999999999999999999988 89999999999


Q ss_pred             HHHHHHHHHHHHHcCCeEeeCCccC-------CCCceeecEEEecCCC--CCcccccccccceeeeeeeCCHHHHHHHHh
Q 011397          300 HFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPR--DSLIMSEEIFGPLLPILTVDKIEDSFDIIN  370 (487)
Q Consensus       300 ~~~~~~~~i~~a~~~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n  370 (487)
                      +.+++.++|+...+++++++||...       .+|+|++|||+.++++  ++.+++||+||||++|++|+|.+|||+++|
T Consensus       343 ~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N  422 (521)
T PRK11903        343 QLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALAR  422 (521)
T ss_pred             HHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHh
Confidence            9999999999766788999998641       2488999999987654  468899999999999999999999999999


Q ss_pred             cCCCCceEEEecCCHHHHHHHHHhc--ceeeEEEcCCcc-------ccCCCCCCcccCCCCCCCCcc-hHHHHHHhhhcc
Q 011397          371 SGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAV-------HLAVHSLPFGGVQESGMGAYH-GKFSFDVFSHKK  440 (487)
Q Consensus       371 ~~~~gl~~~v~t~d~~~~~~~~~~~--~~g~v~iN~~~~-------~~~~~~~pfGG~~~SG~g~~~-g~~~l~~~~~~k  440 (487)
                      +++|||++||||+|.+.+.++++++  ++|+|+||+.+.       ....+.+||||+|.||+|+++ |.+++++|+++|
T Consensus       423 ~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~  502 (521)
T PRK11903        423 RGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRS  502 (521)
T ss_pred             cCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccc
Confidence            9999999999999999999999999  999999997542       223467899999999999995 589999999977


Q ss_pred             EEE
Q 011397          441 AVL  443 (487)
Q Consensus       441 ~v~  443 (487)
                      +|.
T Consensus       503 ~~~  505 (521)
T PRK11903        503 AVQ  505 (521)
T ss_pred             eee
Confidence            654

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=6e-84  Score=693.87  Aligned_cols=435  Identities=18%  Similarity=0.219  Sum_probs=387.3

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHH-hhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.+.+++++..+ +|+++|+++|++| |+.|+.+|..+|.++|++++++|++++++|++ +++|+|||+.+++ .|+..+
T Consensus        24 tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~~~a~-~ev~~~  100 (663)
T TIGR02278        24 TGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATRRDNW-VDIDGG  100 (663)
T ss_pred             CCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHH-HHHHHH
Confidence            467899999999 6999999999996 99999999999999999999999999999999 5999999999998 899999


Q ss_pred             HHHHHHHHHHHhhhhcCCc----cccccccC--CCcceEeeeec-eEEEEEcCCCcchh------hhhhhcCCeEEEeCC
Q 011397           83 KTSIKSALKELKHWMTPEK----AKTSITTF--PSSAEIVPEPF-GVVLIISPWNYPFF------VGAIAAGNALVLKPS  149 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~P~-GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps  149 (487)
                      ++.++++++..+.+.....    ........  ....++.++|+ |||++|+|||||+.      ++||++||+||+|||
T Consensus       101 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs  180 (663)
T TIGR02278       101 IGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPA  180 (663)
T ss_pred             HHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence            9999999988765431110    00000011  12457899998 99999999999998      899999999999999


Q ss_pred             CCChHHHHHHHHHHhhh--cCCCcEEEEeCChHhHHHHHhC-C-CCeEEEecCHHHHHHHHHHH--hccccceeeecCCC
Q 011397          150 EVAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ-K-WDKICYTGNSRVARIVMAAA--AKHLTPVLLELGGK  223 (487)
Q Consensus       150 ~~~~~~~~~l~~~l~~a--lP~g~v~~v~g~~~~~~~L~~~-~-v~~v~ftGs~~~g~~v~~~a--~~~~~p~~~e~gG~  223 (487)
                      +.+|+++.++.+++.++  +|+|++|+|+|+.  +. +..+ + +|.|.||||+++|+.|++.+  +++++|+++|+|||
T Consensus       181 ~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~--~~-~~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk  257 (663)
T TIGR02278       181 TPTAYVAEALVRTMVESGLLPEGSLQLICGSA--GD-LLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSL  257 (663)
T ss_pred             CcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh--HH-HHhcCCCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCC
Confidence            99999999999999986  8999999999852  22 3333 4 89999999999999999864  47899999999999


Q ss_pred             CcEEEcCCCC-----HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCC
Q 011397          224 SPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVN  297 (487)
Q Consensus       224 ~p~iV~~daD-----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~  297 (487)
                      ||+||++|||     +|.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||+++
T Consensus       258 ~p~IV~~dAd~~~~dl~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~  336 (663)
T TIGR02278       258 NAAILGEDATPDEPEFDLFAQEIVRELT-IKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVS  336 (663)
T ss_pred             CeEEEcCCCCccchhHHHHHHHHHHHHH-hcCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCC
Confidence            9999999999     9999999999999 99999999999999999999999999999999999999988 899999999


Q ss_pred             HHHHHHHHHHHHHHHc-CCeEeeCCccCCCCceeecEEEecCCCCC-cccccccccceeeeeeeCCHHHHHHHHhcCCCC
Q 011397          298 SNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDS-LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKP  375 (487)
Q Consensus       298 ~~~~~~~~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~-~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g  375 (487)
                      +.+.+++.++|+++.+ ++++++||..+.+|+|++|||+.+++++| .+++||+||||++|++|+|.+|||+++|+++||
T Consensus       337 ~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~g  416 (663)
T TIGR02278       337 LEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGS  416 (663)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCC
Confidence            9999999999999975 78999999765568999999999999876 799999999999999999999999999999999


Q ss_pred             ceEEEecCCHHHHHHHHHhc--ceeeEEE-cCCc------cccCCCCCCcccCCCCCCCCc-chHHHHHHhhhccEEEEe
Q 011397          376 LAAYLFTNNKKLKQQFVETV--SAGGLVI-NDTA------VHLAVHSLPFGGVQESGMGAY-HGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       376 l~~~v~t~d~~~~~~~~~~~--~~g~v~i-N~~~------~~~~~~~~pfGG~~~SG~g~~-~g~~~l~~~~~~k~v~~~  445 (487)
                      |++||||+|.+.++++++++  ++|.|+| |...      .....+.+||||+|.||+|++ +|.+++++|++.|+|...
T Consensus       417 L~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~~  496 (663)
T TIGR02278       417 LVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQGS  496 (663)
T ss_pred             ceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEcC
Confidence            99999999999999999999  8999999 6411      112246789999999999999 568999999999998653

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=100.00  E-value=1.7e-83  Score=673.84  Aligned_cols=434  Identities=24%  Similarity=0.375  Sum_probs=400.9

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCC-CHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTK-SYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.+.+++++.++.+|+++++++|++|++.|+.+ +.++|.++|+++++.|.+++++|++++++|+|||..++. .|+..+
T Consensus        25 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~  103 (473)
T cd07082          25 DGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDAL-KEVDRT  103 (473)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH-HHHHHH
Confidence            467899999999999999999999999999988 999999999999999999999999999999999999998 799999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccc--cCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSIT--TFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      ++.++++++.++.+..... .....  ..+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.
T Consensus       104 ~~~l~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~  182 (473)
T cd07082         104 IDYIRDTIEELKRLDGDSL-PGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVL  182 (473)
T ss_pred             HHHHHHHHHHHHHhcCCcc-cccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence            9999999988877643221 11110  123456789999999999999999986      89999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      ++.++.+++.++ +|+|++++++| +.+.+..|+.|+ +|.|+||||+++|+.|.+.++  ++|+++|+||+||+||++|
T Consensus       183 ~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelgg~n~~iV~~d  260 (473)
T cd07082         183 LGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP--MKRLVLELGGKDPAIVLPD  260 (473)
T ss_pred             HHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhC--CCcEEEEcCCCCeEEECCC
Confidence            999999999997 99999999999 456688899886 999999999999999998876  7999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||++.|++.+++++| +++||.|+++++||||++++|+|+++|.++++++++|+|.+ .+++||++++.+++++.+++++
T Consensus       261 adl~~aa~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~  339 (473)
T cd07082         261 ADLELAAKEIVKGAL-SYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDD  339 (473)
T ss_pred             CCHHHHHHHHHHHHH-HhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999998 7999999999999999999998


Q ss_pred             HHc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          311 DKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       311 a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                      +.. ++++++||... +|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.++
T Consensus       340 a~~~ga~~~~gg~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~  418 (473)
T cd07082         340 AVAKGATVLNGGGRE-GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKAR  418 (473)
T ss_pred             HHHCCCEEEeCCccC-CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHH
Confidence            864 67999998764 4899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      ++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|++.|+|..
T Consensus       419 ~~~~~l~~G~v~iN~~~~~-~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~  472 (473)
T cd07082         419 KLADALEVGTVNINSKCQR-GPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI  472 (473)
T ss_pred             HHHHhCCcceEEECCCCCC-CCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence            9999999999999997654 34568999999999999999999999999999864

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=2.1e-83  Score=656.57  Aligned_cols=394  Identities=25%  Similarity=0.410  Sum_probs=363.7

Q ss_pred             HHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEE
Q 011397           45 LKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVL  124 (487)
Q Consensus        45 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~  124 (487)
                      |+++++.|++++++|++++++|+|||+.+++ .|+..+++.+++++.....+..... .  ........+.+++|+|||+
T Consensus         1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~P~Gvv~   76 (409)
T PRK10090          1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII-Q--SDRPGENILLFKRALGVTT   76 (409)
T ss_pred             CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-C--CCCCCceeEEEEecccEEE
Confidence            5789999999999999999999999999998 8999999999999887665432111 1  1111235678899999999


Q ss_pred             EEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEE
Q 011397          125 IISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICY  195 (487)
Q Consensus       125 ~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~f  195 (487)
                      +|+|||||+.      ++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+|+| +.+.+..|++|+ +|.|+|
T Consensus        77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~f  156 (409)
T PRK10090         77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM  156 (409)
T ss_pred             EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEE
Confidence            9999999987      89999999999999999999999999999998 99999999999 567788999996 999999


Q ss_pred             ecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHH
Q 011397          196 TGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLK  275 (487)
Q Consensus       196 tGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~  275 (487)
                      |||+++|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+
T Consensus       157 tGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~  235 (409)
T PRK10090        157 TGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLG  235 (409)
T ss_pred             ECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEcHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCC--CCcccccCCHHHHHHHHHHHHHHHc-CCeEeeCCccCC-CCceeecEEEecCCCCCccccccccc
Q 011397          276 NELENFYGKNPLE--SKDLSRIVNSNHFARLSKLLDDDKV-SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFG  351 (487)
Q Consensus       276 ~~~~~~~~g~p~~--~~~~gpl~~~~~~~~~~~~i~~a~~-~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fg  351 (487)
                      ++++++++|||.+  ++++||++++.+++++.++++++.+ ++++++||..++ .|+|++|||+.+++++|++++||+||
T Consensus       236 ~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~Fg  315 (409)
T PRK10090        236 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFG  315 (409)
T ss_pred             HHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCC
Confidence            9999999999977  6899999999999999999999865 679999997643 57899999999999999999999999


Q ss_pred             ceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHH
Q 011397          352 PLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKF  431 (487)
Q Consensus       352 Pvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~  431 (487)
                      ||++|++|+|++|||+++|++++||+++|||+|.+.++++++++++|.|+||+...+  .+..||||+|.||+|+++|.+
T Consensus       316 Pvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~  393 (409)
T PRK10090        316 PVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKH  393 (409)
T ss_pred             ceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcccccCCccchHH
Confidence            999999999999999999999999999999999999999999999999999997653  345799999999999999999


Q ss_pred             HHHHhhhccEEEEe
Q 011397          432 SFDVFSHKKAVLSR  445 (487)
Q Consensus       432 ~l~~~~~~k~v~~~  445 (487)
                      |+++|++.|++.+.
T Consensus       394 gl~~f~~~k~v~~~  407 (409)
T PRK10090        394 GLHEYLQTQVVYLQ  407 (409)
T ss_pred             HHHHhcceEEEEEe
Confidence            99999999998764

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=4.3e-83  Score=709.94  Aligned_cols=437  Identities=21%  Similarity=0.322  Sum_probs=404.4

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      ++++.+++++.++.+++++|+++|++|++.|+.+|.++|.++|+++++.|++++++|+.+++.|+||+..++. .|+..+
T Consensus       571 ~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a~-~EV~ea  649 (1038)
T PRK11904        571 DRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDAI-AEVREA  649 (1038)
T ss_pred             CCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence            3456899999999999999999999999999999999999999999999999999999999999999999998 899999


Q ss_pred             HHHHHHHHHHHhhhhcC-CccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           83 KTSIKSALKELKHWMTP-EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      ++.+++++.....+... .....   ..+......++|+|||++|+|||||+.      ++||++||+||+|||+.+|++
T Consensus       650 id~lr~ya~~a~~~~~~~~~l~g---~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~  726 (1038)
T PRK11904        650 VDFCRYYAAQARRLFGAPEKLPG---PTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLI  726 (1038)
T ss_pred             HHHHHHHHHHHHHhhCCCcccCC---CCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHH
Confidence            99999999998876532 11111   224567889999999999999999987      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcc---ccceeeecCCCCcEEEc
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFD  229 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~---~~p~~~e~gG~~p~iV~  229 (487)
                      +..+.+++.++ +|+|++|+|+|+ .+.+..|+.|+ ++.|+||||+++|+.|.+.++.+   .+|+++|+|||||+||+
T Consensus       727 a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~  806 (1038)
T PRK11904        727 AAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVD  806 (1038)
T ss_pred             HHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEEC
Confidence            99999999998 999999999995 45789999997 99999999999999999888765   68999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 011397          230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLL  308 (487)
Q Consensus       230 ~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i  308 (487)
                      +|||+|.|++.+++|+| .++||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+.+++.++|
T Consensus       807 ~dAdld~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I  885 (1038)
T PRK11904        807 STALPEQVVDDVVTSAF-RSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHI  885 (1038)
T ss_pred             CCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999998 89999999999999999999


Q ss_pred             HHHHcCCeEeeCCccCC---CCceeecEEEecCCCCCcccccccccceeeeeeeC--CHHHHHHHHhcCCCCceEEEecC
Q 011397          309 DDDKVSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTN  383 (487)
Q Consensus       309 ~~a~~~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~t~  383 (487)
                      +++++++++++||..++   +|+|+.|||+..  +++.+++||+||||++|++|+  +++|||+++|+++|||+++|||+
T Consensus       886 ~~a~~ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~  963 (1038)
T PRK11904        886 ERMKREARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSR  963 (1038)
T ss_pred             HHHHcCCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcC
Confidence            99988899999997643   489999999963  567789999999999999998  69999999999999999999999


Q ss_pred             CHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEeC
Q 011397          384 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       384 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      |.+.++++++++++|+|+||+.+++...+.+||||+|.||+| +.+|+++++.|++.|+|.+..
T Consensus       964 d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904        964 IEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred             CHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEcc
Confidence            999999999999999999999877666677899999999999 678999999999999998754

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.4e-83  Score=690.50  Aligned_cols=436  Identities=17%  Similarity=0.264  Sum_probs=386.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHH-hhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.+.+++++.++ +|+++|+++|++| ++.|+.++..+|.++|++++++|++++++|++ ++.|+|||..+++ .|+..+
T Consensus        28 tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~~~a~-~ev~~~  104 (675)
T PRK11563         28 TGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATRRDSW-IDIEGG  104 (675)
T ss_pred             CCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCHHHHH-HHHHHH
Confidence            577889999987 6999999999998 79999999999999999999999999999998 5899999999998 799999


Q ss_pred             HHHHHHHHHHHhhhhcCCc----ccccccc-CC-CcceEeeeec-eEEEEEcCCCcchh------hhhhhcCCeEEEeCC
Q 011397           83 KTSIKSALKELKHWMTPEK----AKTSITT-FP-SSAEIVPEPF-GVVLIISPWNYPFF------VGAIAAGNALVLKPS  149 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~----~~~~~~~-~~-~~~~~~~~P~-GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps  149 (487)
                      ++.+++++...........    ....... .. ...+..++|+ |||++|+|||||+.      ++||++||+||+|||
T Consensus       105 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPs  184 (675)
T PRK11563        105 IGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPA  184 (675)
T ss_pred             HHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECC
Confidence            9999999887755431110    0000001 11 1246788997 99999999999998      899999999999999


Q ss_pred             CCChHHHHHHHHHHhhh--cCCCcEEEEeCChHhHHHHHhC-C-CCeEEEecCHHHHHHHHHH--HhccccceeeecCCC
Q 011397          150 EVAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ-K-WDKICYTGNSRVARIVMAA--AAKHLTPVLLELGGK  223 (487)
Q Consensus       150 ~~~~~~~~~l~~~l~~a--lP~g~v~~v~g~~~~~~~L~~~-~-v~~v~ftGs~~~g~~v~~~--a~~~~~p~~~e~gG~  223 (487)
                      +.+|+++.++.+++.++  +|+|++|+|+|+..  . +..+ + +|.|.||||+++|+.|++.  ++++++|+++|+|||
T Consensus       185 e~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~--~-~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGGk  261 (675)
T PRK11563        185 TATAYLTEAVVRLIVESGLLPEGALQLICGSAG--D-LLDHLDGQDVVTFTGSAATAQKLRAHPNVVANSVPFTAEADSL  261 (675)
T ss_pred             CCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH--H-HhhcCCCCCEEEEECcHHHHHHHHhhhhhhhCCceEEEecCCc
Confidence            99999999999999986  89999999998532  2 3443 3 8999999999999999985  458899999999999


Q ss_pred             CcEEEcCCCC-----HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCC
Q 011397          224 SPVVFDSGIN-----LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVN  297 (487)
Q Consensus       224 ~p~iV~~daD-----l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~  297 (487)
                      ||+||++|||     +|.|++.+++|+| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||+++
T Consensus       262 np~IV~~DAd~~~~dld~aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~  340 (675)
T PRK11563        262 NAAILGPDATPGTPEFDLFVKEVVREMT-VKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALAS  340 (675)
T ss_pred             CceEECCCCCcCchhHHHHHHHHHHHHH-HhCCCccccceeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcC
Confidence            9999999995     9999999999999 99999999999999999999999999999999999999988 899999999


Q ss_pred             HHHHHHHHHHHHHHHcCCeEeeCCccC--------CCCceeecEEEecCCC--CCcccccccccceeeeeeeCCHHHHHH
Q 011397          298 SNHFARLSKLLDDDKVSGKIVHGGERD--------KNKLRIAPTLLLDVPR--DSLIMSEEIFGPLLPILTVDKIEDSFD  367 (487)
Q Consensus       298 ~~~~~~~~~~i~~a~~~~~~~~gg~~~--------~~g~~~~Ptv~~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~  367 (487)
                      +.+++++.++|++|.+.+++++||...        .+|+|++|||+.++++  ++.+++||+||||++|++|+|.+|||+
T Consensus       341 ~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~  420 (675)
T PRK11563        341 LEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIE  420 (675)
T ss_pred             HHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHH
Confidence            999999999999998669999998521        2589999999999998  578999999999999999999999999


Q ss_pred             HHhcCCCCceEEEecCCHHHHHHHHHhcc--eeeEEEcCCcc------c-cCCCCCCcccCCCCCCCCc-chHHHHHHhh
Q 011397          368 IINSGTKPLAAYLFTNNKKLKQQFVETVS--AGGLVINDTAV------H-LAVHSLPFGGVQESGMGAY-HGKFSFDVFS  437 (487)
Q Consensus       368 ~~n~~~~gl~~~v~t~d~~~~~~~~~~~~--~g~v~iN~~~~------~-~~~~~~pfGG~~~SG~g~~-~g~~~l~~~~  437 (487)
                      ++|+++|||++||||+|.+.+.+++++++  +|.||||+.+.      + ...+.+||||+|.||+|++ +|.+++++|+
T Consensus       421 ~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~  500 (675)
T PRK11563        421 LAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYM  500 (675)
T ss_pred             HHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhh
Confidence            99999999999999999999999999997  99999997531      1 1236789999999999999 5699999999


Q ss_pred             hccEEEEeC
Q 011397          438 HKKAVLSRG  446 (487)
Q Consensus       438 ~~k~v~~~~  446 (487)
                      +.|+|...+
T Consensus       501 ~~k~~~~~~  509 (675)
T PRK11563        501 QRTAVQGSP  509 (675)
T ss_pred             eeeeeecCH
Confidence            999986654

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=2.4e-80  Score=693.16  Aligned_cols=419  Identities=19%  Similarity=0.297  Sum_probs=388.7

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      ..+.+++++.++.+|++.|++.|++|++.|+.+|.++|.++|++++++|++++++|+.+++.|+|||..++. .|+..++
T Consensus       669 ~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~A~-~EV~eai  747 (1318)
T PRK11809        669 PRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAI-AEVREAV  747 (1318)
T ss_pred             CCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            357889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++||+......+               ....++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       748 dflryyA~~a~~~~---------------~~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~  812 (1318)
T PRK11809        748 DFLRYYAGQVRDDF---------------DNDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAA  812 (1318)
T ss_pred             HHHHHHHHHHHHhc---------------CCceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHH
Confidence            99999988765421               1245799999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccc------cceeeecCCCCcEEE
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL------TPVLLELGGKSPVVF  228 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~------~p~~~e~gG~~p~iV  228 (487)
                      .+++++.++ +|+|++|+++| +.+.+..|+.|+ |+.|+||||+++|+.|.+.+++++      +|+++|+||+|++||
T Consensus       813 ~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IV  892 (1318)
T PRK11809        813 QAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIV  892 (1318)
T ss_pred             HHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEE
Confidence            999999998 99999999999 456799999997 999999999999999999988775      899999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 011397          229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKL  307 (487)
Q Consensus       229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~  307 (487)
                      ++|||+|.|++.+++|+| .++||.|++.+++|||++++|+|+++|+++++++++|||.+ ++++||++++.+.+++.++
T Consensus       893 dsdAdle~Av~~iv~sAF-~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~  971 (1318)
T PRK11809        893 DSSALTEQVVADVLASAF-DSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERH  971 (1318)
T ss_pred             CCCCCHHHHHHHHHHHHH-hcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHH
Confidence            999999999999999999 99999999999999999999999999999999999999998 8999999999999999999


Q ss_pred             HHHHHc-CCeEeeCCccC----CCCceeecEEEecCCCCCcccccccccceeeeeeeC--CHHHHHHHHhcCCCCceEEE
Q 011397          308 LDDDKV-SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYL  380 (487)
Q Consensus       308 i~~a~~-~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v  380 (487)
                      |+++++ +++++.|+...    ..|+|+.|||+..  +++.++++|+||||++|++|+  +++|+|+++|+++|||+++|
T Consensus       972 I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV 1049 (1318)
T PRK11809        972 IQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGV 1049 (1318)
T ss_pred             HHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEE
Confidence            999975 55777766432    3599999999974  567889999999999999996  79999999999999999999


Q ss_pred             ecCCHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccE
Q 011397          381 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKA  441 (487)
Q Consensus       381 ~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~  441 (487)
                      ||+|.+.++++++++++|+|+||+...+...+.+||||+|.||+| +.+|++++..|+..+.
T Consensus      1050 ~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809       1050 HTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred             EeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence            999999999999999999999999776655567899999999999 4799999999999874

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=6.1e-80  Score=691.90  Aligned_cols=423  Identities=20%  Similarity=0.325  Sum_probs=391.2

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      ..+.+++++.++.+++++|++.|++|++.|+.+|.++|.++|+++++.|++++++|+.+++.|+||++.++. .|+..++
T Consensus       577 ~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ea~-~Ev~eai  655 (1208)
T PRK11905        577 HDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANAI-AEVREAV  655 (1208)
T ss_pred             CCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            367889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++...+.+..               ...++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       656 d~lr~ya~~a~~~~~---------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~  720 (1208)
T PRK11905        656 DFLRYYAAQARRLLN---------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAA  720 (1208)
T ss_pred             HHHHHHHHHHHHhcC---------------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHH
Confidence            999999887665421               134689999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcc---ccceeeecCCCCcEEEcCC
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~---~~p~~~e~gG~~p~iV~~d  231 (487)
                      .+++++.++ +|+|++|+|+|+ .+.+..|+.|+ |+.|+||||+++|+.|.+.++.+   .+|+++|+|||||+||++|
T Consensus       721 ~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~d  800 (1208)
T PRK11905        721 RAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSS  800 (1208)
T ss_pred             HHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCC
Confidence            999999998 999999999994 45899999997 99999999999999999998876   4899999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||+|.|++.+++|+| .++||.|++++++|||++++|+|+++|+++++++++|||.+ ++++||++++.+.+++.++|++
T Consensus       801 Adle~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~  879 (1208)
T PRK11905        801 ALPEQVVADVIASAF-DSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEA  879 (1208)
T ss_pred             CCHHHHHHHHHHHHH-hcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999999 8999999999999999999999


Q ss_pred             HHcCCe-EeeCCccC--CCCceeecEEEecCCCCCcccccccccceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCH
Q 011397          311 DKVSGK-IVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNK  385 (487)
Q Consensus       311 a~~~~~-~~~gg~~~--~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~t~d~  385 (487)
                      +.+.+. ++.|+...  .+|+|+.|||+..  +++.++++|+||||++|++|+  +++|+|+++|+++|||+++|||+|.
T Consensus       880 a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~  957 (1208)
T PRK11905        880 MRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRID  957 (1208)
T ss_pred             HHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCH
Confidence            987554 44444221  3589999999973  567889999999999999997  6999999999999999999999999


Q ss_pred             HHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEe
Q 011397          386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       386 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +.++++.+++++|+|+||+.+++...+.+||||+|.||+| +.+|+++++.|++.|++...
T Consensus       958 ~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905        958 ETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred             HHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeecc
Confidence            9999999999999999999877666677899999999999 48999999999999998754

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=100.00  E-value=3.2e-79  Score=635.04  Aligned_cols=416  Identities=16%  Similarity=0.211  Sum_probs=368.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhC--CCCCHHHH----HHHHHHHHHHHHhC--HHHHHHHHHhhcCCCcchhh
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASG--KTKSYGWR----VSQLKSLMKMLNER--EPDIVDALRQDLDKPELESS   75 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~   75 (487)
                      +.+.+++++.++.+|+++++++|++||+.|  +.++..+|    .++|.++++.|+++  .++|++++++|+|||+.+++
T Consensus        21 t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a~  100 (489)
T cd07126          21 NGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQAL  100 (489)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHH
Confidence            567889999999999999999999999988  55779999    89999999999999  49999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCC
Q 011397           76 IYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPS  149 (487)
Q Consensus        76 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps  149 (487)
                       .|+..+++.++++++........... ......+...+++++|+|||++|+|||||+.      ++||++||+||+|||
T Consensus       101 -~Ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPS  178 (489)
T cd07126         101 -GEVVVTRKFLENFAGDQVRFLARSFN-VPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVD  178 (489)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCceec-cCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence             89999999999999876654322110 0111123466889999999999999999997      899999999999999


Q ss_pred             CCChHHHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEE
Q 011397          150 EVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV  227 (487)
Q Consensus       150 ~~~~~~~~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~i  227 (487)
                      +.+|.++.++++++.++ +|+|++|+|+|+.+.+..|+.|+ +|.|+||||+++|+.|...++   +++.+|+||+||+|
T Consensus       179 e~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~~~g---~k~~lElgg~~~~I  255 (489)
T cd07126         179 SKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLALELH---GKVKLEDAGFDWKI  255 (489)
T ss_pred             CCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHHHhC---CCEEeecCCCCceE
Confidence            99999999999999998 99999999999545566688775 999999999999999988776   57999999999999


Q ss_pred             EcCCC-CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCc-HHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHH
Q 011397          228 FDSGI-NLKVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS  305 (487)
Q Consensus       228 V~~da-Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~  305 (487)
                      |++|| |+|.|++.+++++| .|+||.|++++|+|||+++ +|+|+++|++.++++++|+    +++||+++.. .+++.
T Consensus       256 V~~Da~dld~a~~~~~~g~f-~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~----~~~Gpli~~~-~~~v~  329 (489)
T cd07126         256 LGPDVSDVDYVAWQCDQDAY-ACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED----LTIGPVLTWT-TERIL  329 (489)
T ss_pred             ECCCcccHHHHHHHHHHHHH-hcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC----CcCCCCcCHH-HHHHH
Confidence            99999 99999999999999 9999999999999999995 6899999999999998874    5899999988 89999


Q ss_pred             HHHHHHH--cCCeEeeCCccCC-----CC-ceeecEEEec------CCCCCcccccccccceeeeeeeCC--HHHHHHHH
Q 011397          306 KLLDDDK--VSGKIVHGGERDK-----NK-LRIAPTLLLD------VPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII  369 (487)
Q Consensus       306 ~~i~~a~--~~~~~~~gg~~~~-----~g-~~~~Ptv~~~------~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~  369 (487)
                      ++++++.  +++++++||..++     ++ .|++|||+..      ++++|++++||+||||++|++|+|  ++|||+++
T Consensus       330 ~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~a  409 (489)
T cd07126         330 DHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEAL  409 (489)
T ss_pred             HHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHH
Confidence            9999987  4789999997642     23 3899999852      578999999999999999999999  99999999


Q ss_pred             hcCCCCceEEEecCCHHHHHHHHHhcceee--EEEcCCccccCCC--CCCcccCCCCCCCCcchH
Q 011397          370 NSGTKPLAAYLFTNNKKLKQQFVETVSAGG--LVINDTAVHLAVH--SLPFGGVQESGMGAYHGK  430 (487)
Q Consensus       370 n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~--v~iN~~~~~~~~~--~~pfGG~~~SG~g~~~g~  430 (487)
                      |+++|||++||||+|.++++++++++++|+  |+||+.+.+....  ..||||+|.||.|+++..
T Consensus       410 N~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~~~~~  474 (489)
T cd07126         410 ERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAI  474 (489)
T ss_pred             hCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCCHhHH
Confidence            999999999999999999999999999999  6699876654221  299999999999987653

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=4.3e-79  Score=577.49  Aligned_cols=465  Identities=26%  Similarity=0.405  Sum_probs=432.3

Q ss_pred             chhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHH
Q 011397            5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT   84 (487)
Q Consensus         5 ~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~   84 (487)
                      ...+..+|..+..|+|+.+..|++|+++|.+.+...|.+.|+.+.+.+-+|.|.+++..++||||+..++..+||-.+++
T Consensus        74 g~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlE  153 (583)
T KOG2454|consen   74 GKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLE  153 (583)
T ss_pred             cceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999999999999999998899999999


Q ss_pred             HHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHH
Q 011397           85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSL  158 (487)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~  158 (487)
                      .+.|...+.++|+++..........-...++.++|+||++.|.|||||+.      +.||.+||++|+|-|+.+.++...
T Consensus       154 KI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~f  233 (583)
T KOG2454|consen  154 KITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCF  233 (583)
T ss_pred             HhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhh
Confidence            99999999999998877665544455578899999999999999999998      889999999999999999999988


Q ss_pred             HHHHHhhh-----cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          159 LAKLVGEY-----MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       159 l~~~l~~a-----lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      ..++++.+     -|++++|++++=++.+++|.+|+ ++.+.|.||..+++.|++.+++.++|+++|+|||++.||++||
T Consensus       234 y~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~dda  313 (583)
T KOG2454|consen  234 YFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICDDA  313 (583)
T ss_pred             HHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEeccc
Confidence            88887765     49999999999779999999997 9999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |++..+..++++.| ..+||.|+..+|++||+++||.|+..|.++++.++.|.|.. ..+||.+++..+++.+++++++|
T Consensus       314 ~l~~v~si~mRGtf-QSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DA  392 (583)
T KOG2454|consen  314 DLSHVASIAMRGTF-QSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDA  392 (583)
T ss_pred             cHHHHHHHHHhhhh-hhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999998766 89999999999999999999999


Q ss_pred             Hc-CCeEeeCCcc-----CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCH
Q 011397          312 KV-SGKIVHGGER-----DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK  385 (487)
Q Consensus       312 ~~-~~~~~~gg~~-----~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  385 (487)
                      .. |+++++||.+     .+.|.|++||++.+++++|.+++||.||||++++++++.|++++++|++++||.++||+.|.
T Consensus       393 v~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk  472 (583)
T KOG2454|consen  393 VDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDK  472 (583)
T ss_pred             HhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccH
Confidence            75 7799999975     35689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC-----CCCCCCccCCCCch
Q 011397          386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG-----FIGDVPVRYPPYTK  460 (487)
Q Consensus       386 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~-----~~~~~~~~~~~~~~  460 (487)
                      .++++++++++.|.|.||+...++ .-.+||||+|.||+|+..|.+|++...+.|+|....     +.++.++.||-|.+
T Consensus       473 ~~c~y~a~~lqtG~vAiNDFasfY-~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~~~~~~t~ip~aldypi~~s  551 (583)
T KOG2454|consen  473 HRCKYIASQLQTGVVAINDFASFY-MCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDRVAENATEIPEALDYPIYGS  551 (583)
T ss_pred             HHHHHHHhhhhccceeehhhhhhh-eeccccCCccCCCccccccHHHHHHHhcccceeccchhhhhccCCccccccCcCh
Confidence            999999999999999999987654 456999999999999999999999999999996654     34577788998886


Q ss_pred             hH-HHHHHHHHh
Q 011397          461 GK-LRLLKVLIS  471 (487)
Q Consensus       461 ~~-~~~~~~~~~  471 (487)
                      .| |++++.|+-
T Consensus       552 ~kaW~fvrsli~  563 (583)
T KOG2454|consen  552 LKAWDFVRSLID  563 (583)
T ss_pred             hhHHHHHHHHHH
Confidence            65 888888763

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=100.00  E-value=1.7e-77  Score=623.07  Aligned_cols=410  Identities=17%  Similarity=0.270  Sum_probs=362.8

Q ss_pred             HHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhh--h
Q 011397           19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKH--W   96 (487)
Q Consensus        19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~--~   96 (487)
                      +++|++.|++|++.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..++. .|+..+++.++++++.++.  |
T Consensus         1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~   79 (454)
T cd07129           1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSW   79 (454)
T ss_pred             ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999999999999999999999999888 8999999999999987763  2


Q ss_pred             hcCCccccccc---cCCCcceEeeeeceEEEEEcCCCcchh--------hhhhhcCCeEEEeCCCCChHHHHHHHHHHh-
Q 011397           97 MTPEKAKTSIT---TFPSSAEIVPEPFGVVLIISPWNYPFF--------VGAIAAGNALVLKPSEVAPASSSLLAKLVG-  164 (487)
Q Consensus        97 ~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~--------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~-  164 (487)
                      ...........   ......+.+++|+|||++|+|||||+.        ++||++||+||+|||+.+|.++.++++++. 
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~  159 (454)
T cd07129          80 LDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRA  159 (454)
T ss_pred             ccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence            21111100000   011245788999999999999999953        899999999999999999999999988875 


Q ss_pred             ---hh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc--cccceeeecCCCCcEEEcCCC---C
Q 011397          165 ---EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSGI---N  233 (487)
Q Consensus       165 ---~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~--~~~p~~~e~gG~~p~iV~~da---D  233 (487)
                         ++ +|+|+||+|+| +.+.+..|++|+ +|.|+||||+.+|+.|++.+++  ++||+++|+|||||+||++||   |
T Consensus       160 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~d  239 (454)
T cd07129         160 ALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAER  239 (454)
T ss_pred             HHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHH
Confidence               55 99999999999 557889999997 9999999999999999999988  699999999999999999999   8


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCC-cHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      ++.|++.+++++| .|+||.|+++++||||++ ++|+|+++|+++++++++|         |++++.+.++..+.++++.
T Consensus       240 l~~aa~~i~~~~~-~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g---------~~~~~~~~~~~~~~i~~a~  309 (454)
T cd07129         240 GEAIAQGFVGSLT-LGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ---------TMLTPGIAEAYRQGVEALA  309 (454)
T ss_pred             HHHHHHHHHHHHh-cCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC---------CCcChHHHHHHHHHHHHHH
Confidence            9999999999999 999999999999999999 9999999999999988654         5667777777777887775


Q ss_pred             c--CCeEeeCCccCCCCceeecEEEecCC---CCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC--H
Q 011397          313 V--SGKIVHGGERDKNKLRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN--K  385 (487)
Q Consensus       313 ~--~~~~~~gg~~~~~g~~~~Ptv~~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d--~  385 (487)
                      +  ++++++||....+|+|++|||+...+   ++|+++++|+||||++|++|+|.+|+|+++|++.+||+++|||+|  .
T Consensus       310 ~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~  389 (454)
T cd07129         310 AAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDL  389 (454)
T ss_pred             hcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchH
Confidence            4  57999999765568999999998665   689999999999999999999999999999999999999999999  7


Q ss_pred             HHHHHHHHhc--ceeeEEEcCCccccC-CCCCCccc-CCCCCCCCc--chHHHHHHhhhc
Q 011397          386 KLKQQFVETV--SAGGLVINDTAVHLA-VHSLPFGG-VQESGMGAY--HGKFSFDVFSHK  439 (487)
Q Consensus       386 ~~~~~~~~~~--~~g~v~iN~~~~~~~-~~~~pfGG-~~~SG~g~~--~g~~~l~~~~~~  439 (487)
                      +.++++++++  ++|+|+||+++.+.. .+.+|||| +|.||.|++  +|.+++++|+++
T Consensus       390 ~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~  449 (454)
T cd07129         390 ALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP  449 (454)
T ss_pred             HHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence            9999999999  699999998654432 25899999 999999999  799999999986

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=100.00  E-value=5e-77  Score=619.81  Aligned_cols=418  Identities=31%  Similarity=0.491  Sum_probs=389.8

Q ss_pred             HHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcC
Q 011397           20 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTP   99 (487)
Q Consensus        20 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~   99 (487)
                      ++++++|++|++.|+.++.++|.++|+++++.|.++.++|+++++.|+||+..++. .|+..+++.++++++.++.+...
T Consensus         1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~~~   79 (432)
T cd07078           1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGE   79 (432)
T ss_pred             CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc
Confidence            36889999999999999999999999999999999999999999999999998887 89999999999999888877544


Q ss_pred             CccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh-cCCCcE
Q 011397          100 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSI  172 (487)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g~v  172 (487)
                      ..   .........+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+.++|.++ +|++++
T Consensus        80 ~~---~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~  156 (432)
T cd07078          80 VI---PSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVL  156 (432)
T ss_pred             cc---cccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcE
Confidence            32   111234467889999999999999999976      79999999999999999999999999999998 799999


Q ss_pred             EEEeCChH-hHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCC
Q 011397          173 RVVEGAVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNN  250 (487)
Q Consensus       173 ~~v~g~~~-~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~  250 (487)
                      ++++++.+ .+..|+.|+ +|.|.||||..+++.|.+.++++++|+++|+||+||+||++|+|++.|++.+++++| +++
T Consensus       157 ~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~-~~~  235 (432)
T cd07078         157 NVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF-GNA  235 (432)
T ss_pred             EEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hcc
Confidence            99998544 788899986 899999999999999999999999999999999999999999999999999999999 999


Q ss_pred             CCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH-cCCeEeeCCccCC--C
Q 011397          251 GQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-VSGKIVHGGERDK--N  326 (487)
Q Consensus       251 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-~~~~~~~gg~~~~--~  326 (487)
                      ||.|+++++||||++++++|+++|++++.++++|+|.+ ++++||++++.+.+++.++++++. .++++++||..+.  .
T Consensus       236 Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~  315 (432)
T cd07078         236 GQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGK  315 (432)
T ss_pred             CCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCC
Confidence            99999999999999999999999999999999999988 899999999999999999999886 4678999987654  4


Q ss_pred             CceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCc
Q 011397          327 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA  406 (487)
Q Consensus       327 g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~  406 (487)
                      |.|++|||+.+++++++++++|+||||++|++|++++|||+++|+.++||+++|||+|.+.+++++.++++|+|+||+++
T Consensus       316 g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~  395 (432)
T cd07078         316 GYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYS  395 (432)
T ss_pred             CcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             cccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          407 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       407 ~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      .+ ..+.+||||.|.||+|+++|++++++|++.|+|.
T Consensus       396 ~~-~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~  431 (432)
T cd07078         396 VG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT  431 (432)
T ss_pred             CC-CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence            75 5789999999999999999999999999999875

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=100.00  E-value=2.5e-77  Score=619.28  Aligned_cols=410  Identities=17%  Similarity=0.219  Sum_probs=361.6

Q ss_pred             HHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhh-c
Q 011397           20 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWM-T   98 (487)
Q Consensus        20 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~-~   98 (487)
                      ++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||. ++. .|+..+++.+++++....... .
T Consensus         2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~~~   79 (442)
T cd07084           2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYRIP   79 (442)
T ss_pred             hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcccc
Confidence            6799999999999999999999999999999999999999999999999999 666 799999999999987775431 1


Q ss_pred             CCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh-c-CCC
Q 011397           99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M-DLS  170 (487)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a-l-P~g  170 (487)
                      ...............+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+.+++.++ + |+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g  159 (442)
T cd07084          80 HEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE  159 (442)
T ss_pred             ccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCcc
Confidence            111100000112356789999999999999999997      79999999999999999999999999999998 6 999


Q ss_pred             cEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC-CHHHHHHHHHHHhccc
Q 011397          171 SIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI-NLKVACRRMIMGKWGC  248 (487)
Q Consensus       171 ~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da-Dl~~aa~~i~~~~~~~  248 (487)
                      ++++++|+.+.+..|+.|+ +|.|+||||+++|+.|++.++.  +|+++|+|||||+||++|| |+|.|++.+++++| .
T Consensus       160 ~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~-~  236 (442)
T cd07084         160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMT-A  236 (442)
T ss_pred             ceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHh-c
Confidence            9999999656888999997 9999999999999999998765  8999999999999999999 69999999999999 9


Q ss_pred             CCCCccccCCEEEEcCC-cHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHc--CCeEeeCCccCC
Q 011397          249 NNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV--SGKIVHGGERDK  325 (487)
Q Consensus       249 ~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~--~~~~~~gg~~~~  325 (487)
                      |+||.|+++++||||++ ++|+|+++|+++++++++|    ++++||++++...++    ++++.+  ++++++||....
T Consensus       237 ~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g----~~~~gpl~~~~~~~~----i~~a~~~gga~~~~gg~~~~  308 (442)
T cd07084         237 CSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE----DLLLGPVQTFTTLAM----IAHMENLLGSVLLFSGKELK  308 (442)
T ss_pred             ccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC----ccccChhhhHHHHHH----HHHHHhcCCcEEEeCCcccc
Confidence            99999999999999999 9999999999999999988    689999977655444    444443  368999987521


Q ss_pred             -------CCceeecEEEecCCCCC---cccccccccceeeeeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHH
Q 011397          326 -------NKLRIAPTLLLDVPRDS---LIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE  393 (487)
Q Consensus       326 -------~g~~~~Ptv~~~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~  393 (487)
                             .|+|++|||+.+++++|   ++++||+||||++|++|+|  .+||++++|++++||+++|||+|.+.++++++
T Consensus       309 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~  388 (442)
T cd07084         309 NHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIG  388 (442)
T ss_pred             cCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHH
Confidence                   48999999999999997   9999999999999999999  99999999999999999999999999999999


Q ss_pred             hc-ceeeEEEcCCccccCCCCCCccc-CCCCCCCCcc-hHHHHHHhhhccEE
Q 011397          394 TV-SAGGLVINDTAVHLAVHSLPFGG-VQESGMGAYH-GKFSFDVFSHKKAV  442 (487)
Q Consensus       394 ~~-~~g~v~iN~~~~~~~~~~~pfGG-~~~SG~g~~~-g~~~l~~~~~~k~v  442 (487)
                      ++ ++|+||||+.++....+..|||| .|.||+|++. |.+++++|++...+
T Consensus       389 ~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~  440 (442)
T cd07084         389 NLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE  440 (442)
T ss_pred             HHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence            99 99999999763333456677776 8899999985 99999999987654

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=100.00  E-value=1.7e-74  Score=603.77  Aligned_cols=422  Identities=16%  Similarity=0.237  Sum_probs=355.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHH-----H
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIY-----E   78 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~-----e   78 (487)
                      +.+.+.+++..+.   ++++++|++||+.|+.++..+|.++|++++++|+++.++|+++++.|+|||..++. .     +
T Consensus        74 t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~-e~gkp~~  149 (551)
T TIGR02288        74 GVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAF-QAGGPHA  149 (551)
T ss_pred             CCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-hccChHH
Confidence            3567888998885   89999999999999999999999999999999999999999999999999998875 2     6


Q ss_pred             HHHHHHHHHHHHHHHhhhhcCCc---cccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCC
Q 011397           79 VALLKTSIKSALKELKHWMTPEK---AKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPS  149 (487)
Q Consensus        79 v~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps  149 (487)
                      +...++.+++++...........   ............+..++|+|||++|+|||||++      ++||++||+||+|||
T Consensus       150 ~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs  229 (551)
T TIGR02288       150 QDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPH  229 (551)
T ss_pred             HHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECC
Confidence            77888999998887765432111   000000001122357899999999999999998      899999999999999


Q ss_pred             CCChHHHH----HHHHHHhhh-cCCCcEEEEeC--ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecC
Q 011397          150 EVAPASSS----LLAKLVGEY-MDLSSIRVVEG--AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG  221 (487)
Q Consensus       150 ~~~~~~~~----~l~~~l~~a-lP~g~v~~v~g--~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~g  221 (487)
                      +.+|+++.    ++.+++.++ +|+|+||+|++  +.+.++.|+.|+ |+.|.||||+++|+.|.+.++  .+|+++|+|
T Consensus       230 ~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~lElG  307 (551)
T TIGR02288       230 PGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVYTEKA  307 (551)
T ss_pred             cccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEEeecC
Confidence            99998655    567888888 99999999998  356789999997 999999999999999998776  479999999


Q ss_pred             CCCcEEEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCC---------cHHHHHHHHHHHHhhhcCCCCCC-CCc
Q 011397          222 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD---------YAPKLLESLKNELENFYGKNPLE-SKD  291 (487)
Q Consensus       222 G~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~~~~g~p~~-~~~  291 (487)
                      ||||+||++|||+|.+++.+++|+| .|+||.|++++|||||++         +||+|+++|+++++++ +|||.+ .++
T Consensus       308 Gknp~IV~~dADld~aa~~i~~~~f-~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~  385 (551)
T TIGR02288       308 GVNTVIIESTDDYKAMLRNLAFSLS-LYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAV  385 (551)
T ss_pred             CcCeEEEcCCCCHHHHHHHHHHHHH-hhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCccccccc
Confidence            9999999999999999999999999 999999999999999999         7999999999999999 999988 789


Q ss_pred             ccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCC----CC-ceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHH
Q 011397          292 LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK----NK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF  366 (487)
Q Consensus       292 ~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~----~g-~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai  366 (487)
                      +||++++.+++++.+    +.+.|++++||....    +| +|++|||+....++|++++||+||||++|++|+|.+|||
T Consensus       386 ~Gplis~~~~~ri~~----a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi  461 (551)
T TIGR02288       386 LGAIQSPDTLARIAE----ARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAV  461 (551)
T ss_pred             ccCcCCHHHHHHHHH----HHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHH
Confidence            999999999999644    444457777775421    35 588999995444599999999999999999999999999


Q ss_pred             HHHhcC--CCC-ceEEEecCCHHHHHHHHHhc----------ceeeEEEcCCccccCCCCCCcccCCCCCCCCc-chHHH
Q 011397          367 DIINSG--TKP-LAAYLFTNNKKLKQQFVETV----------SAGGLVINDTAVHLAVHSLPFGGVQESGMGAY-HGKFS  432 (487)
Q Consensus       367 ~~~n~~--~~g-l~~~v~t~d~~~~~~~~~~~----------~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~-~g~~~  432 (487)
                      +++|++  .+| |+++|||+|.+.++++.+++          .+|.|+||+        ..||++.+.||...- +..++
T Consensus       462 ~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~--------~~~~~~~~~sg~n~~a~~~~~  533 (551)
T TIGR02288       462 ELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQ--------SAAFSDFHGTGGNPAANASLS  533 (551)
T ss_pred             HHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEcc--------CCCCCCCCCCCCCCccCCccc
Confidence            999998  556 99999999999999999998          556666665        446888888987644 44455


Q ss_pred             HHHhhhccEEEEe
Q 011397          433 FDVFSHKKAVLSR  445 (487)
Q Consensus       433 l~~~~~~k~v~~~  445 (487)
                      --.|...+..+.+
T Consensus       534 ~~~~~~~r~~~~~  546 (551)
T TIGR02288       534 DGAFVANRFRVVQ  546 (551)
T ss_pred             chhhhhcceEEEE
Confidence            5566665554443

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=100.00  E-value=1.4e-75  Score=601.89  Aligned_cols=392  Identities=16%  Similarity=0.236  Sum_probs=335.5

Q ss_pred             HHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhh
Q 011397           17 EAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHW   96 (487)
Q Consensus        17 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~   96 (487)
                      +|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..++.       ++.++++.+.....
T Consensus         4 ~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~~~~   76 (429)
T cd07121           4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKTPGT   76 (429)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhcCcc
Confidence            68999999999999999999999999999999999999999999999999999987653       33455554322111


Q ss_pred             hcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHh----hh
Q 011397           97 MTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY  166 (487)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~----~a  166 (487)
                      . . .............+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.+++++++    ++
T Consensus        77 ~-~-~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~a  154 (429)
T cd07121          77 E-D-LTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEA  154 (429)
T ss_pred             c-c-cccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHc
Confidence            0 0 0000001112345778899999999999999988      899999999999999999999999999885    44


Q ss_pred             -cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHH
Q 011397          167 -MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIM  243 (487)
Q Consensus       167 -lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~  243 (487)
                       +|+|++|+++| +.+.+..|++|+ ||.|+||||+.+|+.|++.    .||+++|+|||||+||++|||+|+|++.+++
T Consensus       155 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~  230 (429)
T cd07121         155 GGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIVQ  230 (429)
T ss_pred             CCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHHh
Confidence             89999999998 567889999997 9999999999999999875    4999999999999999999999999999999


Q ss_pred             HhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcC---CeEeeC
Q 011397          244 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVS---GKIVHG  320 (487)
Q Consensus       244 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~---~~~~~g  320 (487)
                      ++| +|+||.|+++++||||+++||+|+++|+++ .             .++++..+.+++.++++++.++   ++++.|
T Consensus       231 ~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~-------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~g  295 (429)
T cd07121         231 GAS-FDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G-------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVG  295 (429)
T ss_pred             ccc-ccCCCCCCccceEEEeHHHHHHHHHHHHHC-C-------------CEEcCHHHHHHHHHhhcccCCCccccccccC
Confidence            999 999999999999999999999999999885 1             1368899999999999988653   688888


Q ss_pred             Ccc----CCCCceee---cEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCc--eEEEecCCHHHHHHH
Q 011397          321 GER----DKNKLRIA---PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL--AAYLFTNNKKLKQQF  391 (487)
Q Consensus       321 g~~----~~~g~~~~---Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~t~d~~~~~~~  391 (487)
                      |..    ...|.++.   |||+.+++++|++++||+||||++|++|+|+||||+++|++.|||  +++|||+|.+.++++
T Consensus       296 g~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~  375 (429)
T cd07121         296 KDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKM  375 (429)
T ss_pred             cCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHH
Confidence            753    12477777   599999999999999999999999999999999999999999998  999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCC--CCcchHHHHHHhhhccEEEE
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGM--GAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--g~~~g~~~l~~~~~~k~v~~  444 (487)
                      ++++++|+||||+++.    +.+||||+|.|++  |..-| +|+   +..|++..
T Consensus       376 a~~l~aG~v~iN~~~~----~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~~~  422 (429)
T cd07121         376 ARAMQTTIFVKNGPSY----AGLGVGGEGYTTFTIAGPTG-EGL---TSARTFTR  422 (429)
T ss_pred             HhhCCceEEEEcCCCc----CccccCCCccceEEecCCcC-cCc---cChhhhhe
Confidence            9999999999998643    6789999999987  54434 333   55555443

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=100.00  E-value=1.4e-74  Score=594.12  Aligned_cols=398  Identities=15%  Similarity=0.165  Sum_probs=334.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHH--HHHHHHHHhhh
Q 011397           19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTS--IKSALKELKHW   96 (487)
Q Consensus        19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~--l~~~~~~~~~~   96 (487)
                      +++++++|++||+.|+.+|+.+|.++|+++++.|++++++|+++++.|+|||+.+++ .++......  .+++..    .
T Consensus         1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~----~   75 (439)
T cd07081           1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKD----E   75 (439)
T ss_pred             CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhc----c
Confidence            478999999999999999999999999999999999999999999999999999987 555444332  122111    1


Q ss_pred             hcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHh----hh
Q 011397           97 MTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY  166 (487)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~----~a  166 (487)
                      ......   ........+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+++++.    ++
T Consensus        76 ~~~~~~---~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~a  152 (439)
T cd07081          76 KTCGVL---TGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAA  152 (439)
T ss_pred             ccCcee---cCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHc
Confidence            111110   01112345789999999999999999998      999999999999999999999999999885    44


Q ss_pred             -cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHH
Q 011397          167 -MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIM  243 (487)
Q Consensus       167 -lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~  243 (487)
                       +|+|+||+|+| +.+.++.|++|+ ||+|+||||++    +++.+++++||+++|+|||||+||++|||+|.|++.+++
T Consensus       153 G~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~  228 (439)
T cd07081         153 GAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVK  228 (439)
T ss_pred             CCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHH
Confidence             99999999998 667899999997 99999999987    566777889999999999999999999999999999999


Q ss_pred             HhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCcc
Q 011397          244 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER  323 (487)
Q Consensus       244 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~  323 (487)
                      ++| +|+||.|++.+|+|||+++||+|+++|+++.              ||+++..+.+++.++|+++...+..+.||..
T Consensus       229 ~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~--------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~  293 (439)
T cd07081         229 SKT-FDNGVICASEQSVIVVDSVYDEVMRLFEGQG--------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDA  293 (439)
T ss_pred             HHh-cCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCH
Confidence            999 9999999999999999999999999998853              7999999999999999998764434455532


Q ss_pred             ----CCCCceeecE---EEecCC--CCCcccccccccceeeeeeeCCHHHHHHHHhcC----CCCceEEEecCC---HHH
Q 011397          324 ----DKNKLRIAPT---LLLDVP--RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG----TKPLAAYLFTNN---KKL  387 (487)
Q Consensus       324 ----~~~g~~~~Pt---v~~~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~t~d---~~~  387 (487)
                          ...|+|+.||   ++.+++  ++|++++||+||||++|++|+|+||||+++|++    +|||+++|||+|   .+.
T Consensus       294 ~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~  373 (439)
T cd07081         294 YKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIEN  373 (439)
T ss_pred             HHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHH
Confidence                1258899998   998888  999999999999999999999999999999965    899999999999   999


Q ss_pred             HHHHHHhcceeeEEEcCCc-cccCCCCCCcccCCCC--CCCCcchHH-----HHHHhhhccEEE
Q 011397          388 KQQFVETVSAGGLVINDTA-VHLAVHSLPFGGVQES--GMGAYHGKF-----SFDVFSHKKAVL  443 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~-~~~~~~~~pfGG~~~S--G~g~~~g~~-----~l~~~~~~k~v~  443 (487)
                      ++++++++++|.|+||.++ ++......-|||+..+  |.|.++|..     +.++|++.|.|.
T Consensus       374 a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (439)
T cd07081         374 MNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVA  437 (439)
T ss_pred             HHHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeee
Confidence            9999999999999999765 3333334456666655  555655543     456666666654

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=100.00  E-value=1.4e-74  Score=598.91  Aligned_cols=402  Identities=17%  Similarity=0.231  Sum_probs=342.3

Q ss_pred             ccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHH
Q 011397            9 KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS   88 (487)
Q Consensus         9 ~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~   88 (487)
                      +.=...+.+|+++++++|++||++|+.++.++|.++|+++++.|++++++|++++++|+||+..+++.       ..+++
T Consensus        28 ~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~  100 (465)
T PRK15398         28 AVGEMGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVA  100 (465)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHH
Confidence            33345678899999999999999999999999999999999999999999999999999999988652       23444


Q ss_pred             HHHHHh--hhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHH
Q 011397           89 ALKELK--HWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLA  160 (487)
Q Consensus        89 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~  160 (487)
                      +++.+.  .+.....    ........+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..++
T Consensus       101 ~~~~~~~~~~~~~~~----~~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~  176 (465)
T PRK15398        101 AAEKTPGVEDLTTEA----LTGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAI  176 (465)
T ss_pred             HHHHhccccccccCc----ccCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHH
Confidence            444332  1111110    11122356788899999999999999988      89999999999999999999999999


Q ss_pred             HHHhh----h-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          161 KLVGE----Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       161 ~~l~~----a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      +++++    + +|+|++|++++ +.+.+..|++|+ ||.|+||||+++|+.|++    +.+|+++|+|||||+||++|||
T Consensus       177 ~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dAD  252 (465)
T PRK15398        177 ELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETAD  252 (465)
T ss_pred             HHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCC
Confidence            99874    4 89999999998 667889999997 999999999999999988    3599999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHH-
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-  312 (487)
                      +|.|++.+++|+| +|+||.|+++++||||++++|+|+++|+++.              +|++++.+.+++.++++++. 
T Consensus       253 ld~Aa~~i~~g~~-~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~--------------~~li~~~~~~~v~~~l~~~~~  317 (465)
T PRK15398        253 IEKAARDIVKGAS-FDNNLPCIAEKEVIVVDSVADELMRLMEKNG--------------AVLLTAEQAEKLQKVVLKNGG  317 (465)
T ss_pred             HHHHHHHHHHhcc-cCCCCcCCCCceEEEeHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHhhccc
Confidence            9999999999999 9999999999999999999999999999851              26899999999999998643 


Q ss_pred             cCCeEeeCCcc----CCCCcee---ecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCc--eEEEecC
Q 011397          313 VSGKIVHGGER----DKNKLRI---APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL--AAYLFTN  383 (487)
Q Consensus       313 ~~~~~~~gg~~----~~~g~~~---~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~~v~t~  383 (487)
                      ++++++.||..    ...|.++   .|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||  ++||||+
T Consensus       318 ~~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~  397 (465)
T PRK15398        318 TVNKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSR  397 (465)
T ss_pred             ccchhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecC
Confidence            23366666542    1236655   4799999999999999999999999999999999999999999988  9999999


Q ss_pred             CHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          384 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       384 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      |.+.++++++++++|+|+||++..    +.+||||+|.|.+ +.+|+.| ...|..|++..++
T Consensus       398 d~~~a~~~a~~l~~G~V~iN~~~~----~~~p~gg~~~s~~-~~~~~~g-~~~~~~~~~~~~~  454 (465)
T PRK15398        398 NVDNLNKMARAIQTSIFVKNGPSY----AGLGLGGEGFTTF-TIATPTG-EGVTSARTFTRRR  454 (465)
T ss_pred             CHHHHHHHHHhCCceEEEECCCCc----cccCcCCCCCcee-eecccCC-CCccchhhhhhhe
Confidence            999999999999999999998642    6789999999874 2246666 6666677665443

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=100.00  E-value=9.5e-73  Score=592.01  Aligned_cols=430  Identities=18%  Similarity=0.245  Sum_probs=364.4

Q ss_pred             chhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhH----HHHH
Q 011397            5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSI----YEVA   80 (487)
Q Consensus         5 ~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~----~ev~   80 (487)
                      .+.+.+++.+   |+++++++|++|++.|+.++.++|.++|++++++|.+++++|++++++|+||+..++..    .|+.
T Consensus        75 ~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd  151 (549)
T cd07127          75 VELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAGGPHAQD  151 (549)
T ss_pred             CcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcccHHHHH
Confidence            3455677766   89999999999999999999999999999999999999999999999999999987752    1799


Q ss_pred             HHHHHHHHHHHHHhhhhcCCc-cccccc--cCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCC
Q 011397           81 LLKTSIKSALKELKHWMTPEK-AKTSIT--TFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEV  151 (487)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~  151 (487)
                      .+++.++++.+.......... ......  .........++|+||+++|+|||||++      ++||++||+||+|||+.
T Consensus       152 ~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~  231 (549)
T cd07127         152 RGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPA  231 (549)
T ss_pred             HHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcc
Confidence            999999999887765432110 000000  001122457899999999999999976      88999999999999999


Q ss_pred             ChHHHH----HHHHHHhhh-cCCCcEEEEeCC--hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCC
Q 011397          152 APASSS----LLAKLVGEY-MDLSSIRVVEGA--VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK  223 (487)
Q Consensus       152 ~~~~~~----~l~~~l~~a-lP~g~v~~v~g~--~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~  223 (487)
                      +|+++.    .+.+++.++ +|+|+||+|+++  .+.++.|+.|+ ++.|.||||+.+|+.|.+.++  .+|+++|+|||
T Consensus       232 a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~--~~~v~~ElGGk  309 (549)
T cd07127         232 AILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR--QAQVYTEKAGV  309 (549)
T ss_pred             cchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc--cCcEEEecCCc
Confidence            998764    455788887 999999999983  46789999997 999999999999999999887  37999999999


Q ss_pred             CcEEEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCC---------cHHHHHHHHHHHHhhhcCCCCCC-CCccc
Q 011397          224 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD---------YAPKLLESLKNELENFYGKNPLE-SKDLS  293 (487)
Q Consensus       224 ~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~~~~g~p~~-~~~~g  293 (487)
                      ||+||++|||++.+++.+++|+| .|+||.|++++|||||++         +||+|+++|+++++++ +|||.+ .+.+|
T Consensus       310 n~~IV~~dADl~~aa~~i~~~~f-~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~G  387 (549)
T cd07127         310 NTVVVDSTDDLKAMLRNLAFSLS-LYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLG  387 (549)
T ss_pred             CeEEECCCCCHHHHHHHHHHHHH-ccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccC
Confidence            99999999999999999999999 999999999999999999         8999999999999999 899988 89999


Q ss_pred             ccCCHHHHHHHHHHHHHHHcCCeEeeCCccCC----CC-ceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHH
Q 011397          294 RIVNSNHFARLSKLLDDDKVSGKIVHGGERDK----NK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI  368 (487)
Q Consensus       294 pl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~----~g-~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~  368 (487)
                      |++++.+++++.+.+    ..+++++||..+.    .| ++++|||+..++++|++++||+||||++|++|+|.+||+++
T Consensus       388 pli~~~~~~ri~~a~----~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~  463 (549)
T cd07127         388 AIQSPDTLARIAEAR----QLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIEL  463 (549)
T ss_pred             CcCCHHHHHHHHHHH----hCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHH
Confidence            999999999987655    3456888886431    24 46699999988899999999999999999999999999999


Q ss_pred             HhcCC--C-CceEEEecCCHHHHHHHHHhc-cee-eEEEcCCccccCCCCCCcccCCCCCCCCc-chHHHHHHhhhccEE
Q 011397          369 INSGT--K-PLAAYLFTNNKKLKQQFVETV-SAG-GLVINDTAVHLAVHSLPFGGVQESGMGAY-HGKFSFDVFSHKKAV  442 (487)
Q Consensus       369 ~n~~~--~-gl~~~v~t~d~~~~~~~~~~~-~~g-~v~iN~~~~~~~~~~~pfGG~~~SG~g~~-~g~~~l~~~~~~k~v  442 (487)
                      +|++.  + ||+++|||+|.+.++++.+++ .+| .++||.+...+.+..+||||.+.||...- +..+..-.|...+..
T Consensus       464 an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~~  543 (549)
T cd07127         464 ARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRFR  543 (549)
T ss_pred             HHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcceE
Confidence            99973  4 699999999999999999985 454 99999755434455567999999998754 555666777766654


Q ss_pred             EEe
Q 011397          443 LSR  445 (487)
Q Consensus       443 ~~~  445 (487)
                      +.+
T Consensus       544 ~~~  546 (549)
T cd07127         544 VVQ  546 (549)
T ss_pred             EEE
Confidence            444

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=100.00  E-value=2.7e-71  Score=577.66  Aligned_cols=407  Identities=17%  Similarity=0.190  Sum_probs=346.1

Q ss_pred             cCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHH
Q 011397           12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALK   91 (487)
Q Consensus        12 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~   91 (487)
                      ++.+.+++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++..+.......+..++.
T Consensus         3 ~~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~   82 (488)
T TIGR02518         3 DLYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIK   82 (488)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHh
Confidence            46788999999999999999999999999999999999999999999999999999999887653233334455554443


Q ss_pred             HHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHH--
Q 011397           92 ELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLV--  163 (487)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l--  163 (487)
                      ..+. . +.    .....+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+++++  
T Consensus        83 ~~~~-~-G~----~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~  156 (488)
T TIGR02518        83 DMKT-I-GI----LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRK  156 (488)
T ss_pred             hCcc-c-ce----ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHH
Confidence            2211 1 11    011122356788999999999999999986      89999999999999999999999866555  


Q ss_pred             --hhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHH
Q 011397          164 --GEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVAC  238 (487)
Q Consensus       164 --~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa  238 (487)
                        .++ +|+|+||++++ +.+.+..|++|+ ||+|+||||+..++    .++.+++|+++|+|||+|+||++|||+|.|+
T Consensus       157 ~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~----~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa  232 (488)
T TIGR02518       157 AAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVK----AAYSSGTPAIGVGPGNGPAYIERTANVKKAV  232 (488)
T ss_pred             HHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHH----HHHHcCCCEEEEcCCCCeEEEeCCCCHHHHH
Confidence              565 99999999998 678899999997 99999999998654    4455789999999999999999999999999


Q ss_pred             HHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHH-------HhhhcCCCC-CC-CCcccccCCHHHHHHHHHHHH
Q 011397          239 RRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE-------LENFYGKNP-LE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       239 ~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~-------~~~~~~g~p-~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      +.+++|+| +|+||.|++.++||||+++||+|+++|+++       .+.+++|+| .+ .+++||+++..+.+++.++++
T Consensus       233 ~~iv~sk~-~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~  311 (488)
T TIGR02518       233 RDIIDSKT-FDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAG  311 (488)
T ss_pred             HHHHHHHh-cCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhc
Confidence            99999999 999999999999999999999999999998       888999996 54 789999999999999999999


Q ss_pred             HHHc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhc----CCCCceEEEecCC
Q 011397          310 DDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS----GTKPLAAYLFTNN  384 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~~v~t~d  384 (487)
                      .+.. ++++++||..             .+++++++ ++|+||||++|++|+|++|||+++|+    ++|||+++|||+|
T Consensus       312 ~av~~gakll~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d  377 (488)
T TIGR02518       312 LTVPEDAKVLIGEQN-------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSEN  377 (488)
T ss_pred             cccCCCCEEEEeCCC-------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCC
Confidence            9865 7799998852             25677775 79999999999999999999999887    6999999999999


Q ss_pred             HHHHHHHHHhcceeeEEEcCCcc--------cc-CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          385 KKLKQQFVETVSAGGLVINDTAV--------HL-AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       385 ~~~~~~~~~~~~~g~v~iN~~~~--------~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      .+.+++|++++++|+|+||++..        .+ ....+.||+++.+++.   .+.|++++++.|+|...-
T Consensus       378 ~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~  445 (488)
T TIGR02518       378 KDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV  445 (488)
T ss_pred             HHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence            99999999999999999996331        11 1123346666666655   389999999999987764

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=100.00  E-value=6.7e-72  Score=574.15  Aligned_cols=383  Identities=17%  Similarity=0.186  Sum_probs=323.1

Q ss_pred             HHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCc----chhhH-------HHHHHHHH
Q 011397           16 AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSI-------YEVALLKT   84 (487)
Q Consensus        16 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~~~~   84 (487)
                      ..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|++.    .++..       .|+..+++
T Consensus         3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~   82 (417)
T PRK00197          3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE   82 (417)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999998887764    34432       46777777


Q ss_pred             HHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh----hhhhhcCCeEEEeCCCCChHHHHHHH
Q 011397           85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF----VGAIAAGNALVLKPSEVAPASSSLLA  160 (487)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~----~~ALaaGN~Vvlkps~~~~~~~~~l~  160 (487)
                      .+++++...+.. . ..............+++++|+|||++|+|||..+.    ++||++||+||+|||+.+|.++.+++
T Consensus        83 ~~~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p~~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~  160 (417)
T PRK00197         83 GLRQVAALPDPV-G-EVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALV  160 (417)
T ss_pred             HHHHHhhcCCCc-c-ccccceecCCCceEEEEecCceEEEEEcCCCchHHHHHHHHHHHhCCeEEEecChhhhHHHHHHH
Confidence            777775443221 1 11100000112256789999999999999973222    89999999999999999999999999


Q ss_pred             HHH----hhh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          161 KLV----GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       161 ~~l----~~a-lP~g~v~~v~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      +++    .++ +|+|++|+|+| +.+ .+..|..|+ +|.|+||||+.+|+.+++.+   +||+++|+|||||+||++||
T Consensus       161 ~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~dA  237 (417)
T PRK00197        161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDESA  237 (417)
T ss_pred             HHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCC
Confidence            986    455 99999999996 545 566677786 99999999999999998865   59999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      |+|.|++.+++++| +|+| .|++++|+|||+++||+|+++|++++++++.+                            
T Consensus       238 dl~~Aa~~iv~~~~-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~----------------------------  287 (417)
T PRK00197        238 DLDKALKIVLNAKT-QRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE----------------------------  287 (417)
T ss_pred             CHHHHHHHHHHhcc-CCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe----------------------------
Confidence            99999999999999 9999 99999999999999999999999999877532                            


Q ss_pred             cCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397          313 VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV  392 (487)
Q Consensus       313 ~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~  392 (487)
                          ++ ||... .+ |+ |||+   +++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++
T Consensus       288 ----~~-~~~~~-~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~  356 (417)
T PRK00197        288 ----LR-GDEAA-LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFL  356 (417)
T ss_pred             ----Ee-cCHHH-HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHH
Confidence                11 11100 12 22 9998   468999999999999999999999999999999999999999999999999999


Q ss_pred             HhcceeeEEEcCCccccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEeC
Q 011397          393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g----~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++|.|+||+++.  ..+..||||.+.||+|    +++|.+|+++|++.|++++..
T Consensus       357 ~~l~~G~v~VN~~~~--~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~  412 (417)
T PRK00197        357 NEVDSAAVYVNASTR--FTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGD  412 (417)
T ss_pred             HhCCeeEEEEeCCCc--cCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECC
Confidence            999999999998654  2457899999999999    999999999999999998754

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=100.00  E-value=7.1e-72  Score=572.09  Aligned_cols=376  Identities=19%  Similarity=0.235  Sum_probs=318.3

Q ss_pred             HHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcc----hhhH-------HHHHHHHHHHHHH
Q 011397           21 LFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL----ESSI-------YEVALLKTSIKSA   89 (487)
Q Consensus        21 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~~~~~l~~~   89 (487)
                      .++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+..    ++..       .|+..+++.++++
T Consensus         2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~   81 (406)
T cd07079           2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV   81 (406)
T ss_pred             hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999999999777666543    3321       4777777777777


Q ss_pred             HHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEEEeCCCCChHHHHHHHHHHh
Q 011397           90 LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALVLKPSEVAPASSSLLAKLVG  164 (487)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~  164 (487)
                      +...+. . ...............+++++|+|||++|+|| +|..     ++||++||+||+|||+.+|.++..+++++.
T Consensus        82 a~~~~~-~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~  158 (406)
T cd07079          82 AALPDP-V-GEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ  158 (406)
T ss_pred             HhcCCC-C-cccccceeccCccceeEEecceEEEEEecCC-CcchHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence            543221 1 1110000001112467889999999999996 6654     899999999999999999999999999987


Q ss_pred             ----hh-cCCCcEEEEeC-Ch-HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHH
Q 011397          165 ----EY-MDLSSIRVVEG-AV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV  236 (487)
Q Consensus       165 ----~a-lP~g~v~~v~g-~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~  236 (487)
                          ++ +|+|++|+|+| +. +.+..|..|+ +|.|+||||+++|+.|++.+   ++|+++|+|||||+||++|||+|.
T Consensus       159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~~  235 (406)
T cd07079         159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLEM  235 (406)
T ss_pred             HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHH
Confidence                55 99999999998 45 4567778887 99999999999999999876   699999999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCe
Q 011397          237 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK  316 (487)
Q Consensus       237 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~  316 (487)
                      |++.+++++| .|+| .|++++|||||+++||+|+++|++++++.                                +++
T Consensus       236 Aa~~i~~~~f-~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~--------------------------------ga~  281 (406)
T cd07079         236 AVRIVVNAKT-QRPS-VCNALETLLVHRDIAEEFLPKLAEALREA--------------------------------GVE  281 (406)
T ss_pred             HHHHHHHccc-CCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC--------------------------------CCE
Confidence            9999999999 9999 99999999999999999999999877642                                234


Q ss_pred             EeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcc
Q 011397          317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS  396 (487)
Q Consensus       317 ~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~  396 (487)
                      ++ ||...  ..|+.||    ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++++++
T Consensus       282 ~~-~g~~~--~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~  354 (406)
T cd07079         282 LR-GDEET--LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVD  354 (406)
T ss_pred             Ee-cCHHH--HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCC
Confidence            33 33221  1367787    78899999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEEcCCccccCCCCCCcccCCCCCC----CCcchHHHHHHhhhccEEEEe
Q 011397          397 AGGLVINDTAVHLAVHSLPFGGVQESGM----GAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       397 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~----g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +|.|+||+++..  .+.+||||.+.||.    |+++|.+++++|++.|++...
T Consensus       355 ~G~v~iN~~~~~--~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~  405 (406)
T cd07079         355 SAAVYVNASTRF--TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRG  405 (406)
T ss_pred             eeEEEEeCCCcc--cCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeC
Confidence            999999987542  35689999999988    899999999999999998764

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=100.00  E-value=3.1e-70  Score=590.86  Aligned_cols=380  Identities=21%  Similarity=0.211  Sum_probs=329.7

Q ss_pred             HHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH------HhhcC--CCcchhh---HHHHHHHHHHH
Q 011397           18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL------RQDLD--KPELESS---IYEVALLKTSI   86 (487)
Q Consensus        18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a~---~~ev~~~~~~l   86 (487)
                      .+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|++++      ++|+|  ||+.++.   ..|+..+++.+
T Consensus       295 ~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~  374 (718)
T PLN02418        295 GAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASI  374 (718)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHH
Confidence            4999999999999999999999999999999999999999999996      77999  8877763   36999999999


Q ss_pred             HHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEEEeCCCCChHHHHHHHH
Q 011397           87 KSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALVLKPSEVAPASSSLLAK  161 (487)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vvlkps~~~~~~~~~l~~  161 (487)
                      ++++.. ..... +.........+...++.++|+|||++|+||| |+.     ++||++||+||+|||+.+|.++..+++
T Consensus       375 ~~~a~~-~~~~g-~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~~kiapALaaGNtVVlKPse~tp~s~~~l~~  451 (718)
T PLN02418        375 RQLADM-EDPIG-RVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALVQIASLAIRSGNGLLLKGGKEAARSNAILHK  451 (718)
T ss_pred             HHHhcC-ccccC-ccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHHHHHHHHHHhCCEEEEeCCccchHHHHHHHH
Confidence            999876 32221 1111000011223678899999999999999 998     899999999999999999999999999


Q ss_pred             HHhhhcCCCc----EEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHH
Q 011397          162 LVGEYMDLSS----IRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV  236 (487)
Q Consensus       162 ~l~~alP~g~----v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~  236 (487)
                      ++.+++|+|+    +|+|+|+.+.+..|+.|+ ||+|+||||+.   .+.+.++.++||+++|+|||||+||++|||+|.
T Consensus       452 l~~eAlP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~~~k~v~lELGGk~p~iV~~DADld~  528 (718)
T PLN02418        452 VITDAIPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKASTKIPVLGHADGICHVYVDKSADMDM  528 (718)
T ss_pred             HHHHHccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHhcCCCEEEeCCCcceEEEeCCCCHHH
Confidence            9999999996    999998667788899997 99999999996   455556667899999999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHc-CC
Q 011397          237 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SG  315 (487)
Q Consensus       237 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~  315 (487)
                      |++.+++++| .| ||.|++.+|+|||+++||+                       |         .+.++|+++++ |+
T Consensus       529 A~~~i~~~~~-~n-GQ~C~a~~RllVh~~i~d~-----------------------G---------~~~~~i~~a~~~Ga  574 (718)
T PLN02418        529 AKRIVVDAKT-DY-PAACNAMETLLVHKDLVQN-----------------------G---------GLNDLLVALRSAGV  574 (718)
T ss_pred             HHHHHHHHhC-CC-CCccccCcEEEEecccccc-----------------------c---------cHHHHHHHHHHCCC
Confidence            9999999999 88 9999999999999999997                       1         24778888865 56


Q ss_pred             eEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc
Q 011397          316 KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV  395 (487)
Q Consensus       316 ~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~  395 (487)
                      ++ +||...+ |      ++. + ++|++++||+||||++|.+|+|+||||+++|+++|||+++|||+|.+.+.++++++
T Consensus       575 ~l-~Gg~~~~-g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l  644 (718)
T PLN02418        575 TL-YGGPRAS-K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQV  644 (718)
T ss_pred             EE-ECCcccc-C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhC
Confidence            77 7876432 3      233 3 78999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEEcCCccccCCCCCCcccCCCCCC--CCcc--hHHHHHHhhhccEEEEeCCCC
Q 011397          396 SAGGLVINDTAVHLAVHSLPFGGVQESGM--GAYH--GKFSFDVFSHKKAVLSRGFIG  449 (487)
Q Consensus       396 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--g~~~--g~~~l~~~~~~k~v~~~~~~~  449 (487)
                      ++|.||||+++..  .+..||||+|+||+  |+++  |++|+++|++.|+|+....++
T Consensus       645 ~aG~V~IN~~~~~--~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g~~  700 (718)
T PLN02418        645 DSAAVFHNASTRF--SDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNGQV  700 (718)
T ss_pred             CeeEEEEeCCCCC--CCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCCee
Confidence            9999999987542  45789999999999  9875  999999999999999987654

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-70  Score=608.59  Aligned_cols=411  Identities=18%  Similarity=0.203  Sum_probs=353.6

Q ss_pred             hccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHH
Q 011397            8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK   87 (487)
Q Consensus         8 ~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~   87 (487)
                      ..+++..+.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..++..+.+.+.
T Consensus         3 ~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~   82 (862)
T PRK13805          3 KEEMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIY   82 (862)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence            45678899999999999999999999999999999999999999999999999999999999998876323333333332


Q ss_pred             HHHHHHhhhhcCCccccccc-cCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHH
Q 011397           88 SALKELKHWMTPEKAKTSIT-TFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLA  160 (487)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~  160 (487)
                      ++       ........... ......+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..++
T Consensus        83 ~~-------~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~  155 (862)
T PRK13805         83 NS-------YKDEKTVGVIEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAA  155 (862)
T ss_pred             HH-------hcCCCcccccCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHH
Confidence            22       11111111111 112356788999999999999999997      89999999999999999999999999


Q ss_pred             HHHhh----h-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          161 KLVGE----Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       161 ~~l~~----a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      +++++    + +|+|+||+++| +.+.+..|++|+ +|.|+||||+.++    +.++++++|+++|+|||||+||++|||
T Consensus       156 ~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dAD  231 (862)
T PRK13805        156 KIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTAD  231 (862)
T ss_pred             HHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCC
Confidence            98865    3 99999999998 678899999997 9999999999864    456678999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHc
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      ++.|++.|++|+| +|+||.|+++++||||++++|+|+++|+++.              +|++++.+.+++.++++++..
T Consensus       232 l~~Aa~~i~~~k~-~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g--------------~~l~~~~~~~~v~~~i~~a~~  296 (862)
T PRK13805        232 IKRAVNDILLSKT-FDNGMICASEQAVIVDDEIYDEVKEEFASHG--------------AYFLNKKELKKLEKFIFGKEN  296 (862)
T ss_pred             HHHHHHHHHHhhh-ccCCCccCCCceEEEehhhHHHHHHHHHHhC--------------CeeCCHHHHHHHHHHHhhccC
Confidence            9999999999999 9999999999999999999999999998752              589999999999999998754


Q ss_pred             CC--eEeeCCccC----CCCceeecEE------EecCCCCCcccccccccceeeeeeeCCHHHHHHHHhc----CCCCce
Q 011397          314 SG--KIVHGGERD----KNKLRIAPTL------LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS----GTKPLA  377 (487)
Q Consensus       314 ~~--~~~~gg~~~----~~g~~~~Ptv------~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~  377 (487)
                      ++  ..++||...    ..|.++.|++      +.+++++|++++ |.||||++|++|+|++|||+++|+    +++||+
T Consensus       297 ~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~  375 (862)
T PRK13805        297 GALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHT  375 (862)
T ss_pred             CCcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcE
Confidence            32  124566421    2478889987      678899999877 799999999999999999999988    589999


Q ss_pred             EEEecCCHHHHHHHHHhcceeeEEEcCCccc--------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          378 AYLFTNNKKLKQQFVETVSAGGLVINDTAVH--------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       378 ~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~--------~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++|||+|.+.++++++++++|+|+||.++.+        ...+.+|||| |.||+|+++|+.|+++|++.|+|..+.
T Consensus       376 ~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~  451 (862)
T PRK13805        376 AVIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRR  451 (862)
T ss_pred             EEEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence            9999999999999999999999999986521        3678999997 999999999999999999999998765

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=100.00  E-value=6.9e-71  Score=565.74  Aligned_cols=363  Identities=16%  Similarity=0.189  Sum_probs=311.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHH-HHHHHHHHHhhhh
Q 011397           19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT-SIKSALKELKHWM   97 (487)
Q Consensus        19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~-~l~~~~~~~~~~~   97 (487)
                      +++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||+.+++..|+..+++ .++++...  ...
T Consensus         1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~   78 (436)
T cd07122           1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV   78 (436)
T ss_pred             ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence            478999999999999999999999999999999999999999999999999999987447777776 56666431  111


Q ss_pred             cCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHh----hh-
Q 011397           98 TPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVG----EY-  166 (487)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~----~a-  166 (487)
                       +..    ........+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+++++.    ++ 
T Consensus        79 -g~~----~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG  153 (436)
T cd07122          79 -GVI----EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG  153 (436)
T ss_pred             -eee----ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcC
Confidence             000    01112356788999999999999999998      899999999999999999999999888875    45 


Q ss_pred             cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHH
Q 011397          167 MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG  244 (487)
Q Consensus       167 lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~  244 (487)
                      +|+|++|+++| +.+.+..|++|+ ||.|+||||+++++    .++++++|+++|+|||||+||++|||+|.|++.+++|
T Consensus       154 ~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~  229 (436)
T cd07122         154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILS  229 (436)
T ss_pred             CCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence            99999999998 667889999997 99999999998654    4567789999999999999999999999999999999


Q ss_pred             hcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhh-------cCCCCC-C-CCcccccCCHHHHHHHHHHHHHHHc-C
Q 011397          245 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-------YGKNPL-E-SKDLSRIVNSNHFARLSKLLDDDKV-S  314 (487)
Q Consensus       245 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~-------~~g~p~-~-~~~~gpl~~~~~~~~~~~~i~~a~~-~  314 (487)
                      +| +|+||.|+++++||||+++||+|+++|+++...+       +++++. + ++.+||+++..+.+++.+++..+.. +
T Consensus       230 ~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~g  308 (436)
T cd07122         230 KT-FDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPED  308 (436)
T ss_pred             hh-ccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCC
Confidence            99 9999999999999999999999999999988876       677773 3 6788998888777776665543322 2


Q ss_pred             CeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcC----CCCceEEEecCCHHHHHH
Q 011397          315 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG----TKPLAAYLFTNNKKLKQQ  390 (487)
Q Consensus       315 ~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~~v~t~d~~~~~~  390 (487)
                      ++++             +..+.+++++|+++ +|.||||++|++|+|++|||+++|++    +|||++||||+|.+.+++
T Consensus       309 a~vl-------------~~~~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~  374 (436)
T cd07122         309 TKVL-------------VAEETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEE  374 (436)
T ss_pred             CeEE-------------EEecCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHH
Confidence            2333             33356788999987 56799999999999999999999997    799999999999999999


Q ss_pred             HHHhcceeeEEEcCCcc
Q 011397          391 FVETVSAGGLVINDTAV  407 (487)
Q Consensus       391 ~~~~~~~g~v~iN~~~~  407 (487)
                      +++++++|.||||+++.
T Consensus       375 ~~~~l~aG~V~IN~~~~  391 (436)
T cd07122         375 FALRMPVSRILVNTPSS  391 (436)
T ss_pred             HHhhCCceEEEEeCCcc
Confidence            99999999999998653

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=8.9e-68  Score=521.31  Aligned_cols=418  Identities=21%  Similarity=0.330  Sum_probs=382.7

Q ss_pred             chhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHH
Q 011397            5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT   84 (487)
Q Consensus         5 ~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~   84 (487)
                      +..+.+|..++.+|+++|++.|..|+..|..+|+++|+.+|++++++++.+..+|..++++|.||+...+. .||..+++
T Consensus       138 ~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naI-AEVREAVD  216 (769)
T COG4230         138 DDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAI-AEVREAVD  216 (769)
T ss_pred             hHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH-HHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999999999999999998 99999999


Q ss_pred             HHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHH
Q 011397           85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSL  158 (487)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~  158 (487)
                      .++||+.+.+.-+.               ...++|+|.+.+|+|||||+.      +.||++||+|+-||.++||+.+..
T Consensus       217 FlrYYA~~ar~~~g---------------~~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~  281 (769)
T COG4230         217 FLRYYAGQARDTFG---------------NLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQ  281 (769)
T ss_pred             HHHHHHHHHhcccC---------------ccccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHH
Confidence            99999887764221               134589999999999999998      889999999999999999999999


Q ss_pred             HHHHHhhh-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcc---ccceeeecCCCCcEEEcCCC
Q 011397          159 LAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       159 l~~~l~~a-lP~g~v~~v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~---~~p~~~e~gG~~p~iV~~da  232 (487)
                      -+++++++ +|++++|+++|+. ..+..|+.++ ++.|+||||+++++.|.+..+++   ..|++.|.||.|.+|||++|
T Consensus       282 aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsA  361 (769)
T COG4230         282 AVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSA  361 (769)
T ss_pred             HHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechh
Confidence            99999998 9999999999955 5899999985 99999999999999999887763   57899999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      =-+.++..++.|+| ..+||+|.+.+.+++++++.|..++.|+-.+..+++|+|.- .+++||+|+.+....+.++|+..
T Consensus       362 L~EQVv~Dvl~SAF-dSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~m  440 (769)
T COG4230         362 LAEQVVADVLASAF-DSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTM  440 (769)
T ss_pred             hHHHHHHHHHHHHh-hcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999988 99999999999999999999988


Q ss_pred             HcCCeEeeCCccC---CCCceeecEEEecCCCCCcccccccccceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          312 KVSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       312 ~~~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      +..++.++--..+   .+|+|+.||++.-.+-  .-++.|+||||+.|++|+  ++++.|+-+|.++|||+.+|||+-++
T Consensus       441 r~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~--~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRide  518 (769)
T COG4230         441 RSKGRLVHQAAAPNSLQKGTFVAPTLIELENL--DELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDE  518 (769)
T ss_pred             HhcccchhhccCCCccCCceeeCceeEEcCCH--HHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHH
Confidence            7766655432222   3699999999975433  348899999999999995  79999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccE
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKA  441 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~-~~g~~~l~~~~~~k~  441 (487)
                      .+.++.+++++|++|||....+......||||.+-||+|. .+|+.-+..|+..+.
T Consensus       519 ti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p  574 (769)
T COG4230         519 TIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERP  574 (769)
T ss_pred             HHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCC
Confidence            9999999999999999998887778889999999999995 589999999987765

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=100.00  E-value=2.8e-66  Score=527.75  Aligned_cols=356  Identities=33%  Similarity=0.533  Sum_probs=330.8

Q ss_pred             HHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhhcCCcccc
Q 011397           25 ELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKT  104 (487)
Q Consensus        25 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~  104 (487)
                      +|++|+++|+.++.++|.++|+++++.|.++.++|+++++.|+|||..++. .|+...++.++++++.+.++.....   
T Consensus         2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~~~~~~~~~~---   77 (367)
T cd06534           2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPEL---   77 (367)
T ss_pred             hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcc---
Confidence            688999999999999999999999999999999999999999999999998 8999999999999988877654111   


Q ss_pred             ccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC
Q 011397          105 SITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG  177 (487)
Q Consensus       105 ~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a-lP~g~v~~v~g  177 (487)
                      .....+...+.+++|+|||++|+|||+|+.      ++||++||+||+|||+.+|.++..+.+++.++ +|+++++++++
T Consensus        78 ~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~  157 (367)
T cd06534          78 PSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPG  157 (367)
T ss_pred             cccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEc
Confidence            111234467889999999999999999976      79999999999999999999999999999998 79999999999


Q ss_pred             Ch-HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCCccc
Q 011397          178 AV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACI  255 (487)
Q Consensus       178 ~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~  255 (487)
                      +. +.+..|+.|+ +|.|+||||+++++.+.+.++++++|+++|+||+|++||++|+|++.|++.++.++| +++||.|+
T Consensus       158 ~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~-~~~gq~C~  236 (367)
T cd06534         158 GGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAF-FNAGQICT  236 (367)
T ss_pred             CchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCC
Confidence            54 4788899996 899999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             cCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceeecEEE
Q 011397          256 SPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL  335 (487)
Q Consensus       256 a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~  335 (487)
                      ++++||||++++|+|+++|+                                                         ||+
T Consensus       237 s~~~v~v~~~~~~~f~~~l~---------------------------------------------------------tl~  259 (367)
T cd06534         237 AASRLLVHESIYDEFVEKLV---------------------------------------------------------TVL  259 (367)
T ss_pred             CCcEEEEcHHHHHHHHHhhc---------------------------------------------------------eee
Confidence            99999999999999998886                                                         677


Q ss_pred             ecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCCCCCC
Q 011397          336 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP  415 (487)
Q Consensus       336 ~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~p  415 (487)
                      .+++++++++++|+|||+++|++|++++||++++|++++||++||||+|.+.+++++.++++|+|+||+.+... .+.+|
T Consensus       260 ~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~~p  338 (367)
T cd06534         260 VDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGV-GPEAP  338 (367)
T ss_pred             eCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCC-CCCCC
Confidence            77888999999999999999999999999999999999999999999999999999999999999999987643 78899


Q ss_pred             cccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          416 FGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       416 fGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      |||.+.||+|+++|++++++|++.|++.
T Consensus       339 fgg~~~sG~g~~~g~~~~~~~~~~k~i~  366 (367)
T cd06534         339 FGGVKNSGIGREGGPYGLEEYTRTKTVV  366 (367)
T ss_pred             CCCcccCccCCCChHHHHHHhceEEEEe
Confidence            9999999999999999999999999874

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=100.00  E-value=4.4e-67  Score=537.16  Aligned_cols=368  Identities=18%  Similarity=0.157  Sum_probs=321.7

Q ss_pred             HHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhh----------HHHHHHHHHHHHHHHHHH
Q 011397           24 KELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESS----------IYEVALLKTSIKSALKEL   93 (487)
Q Consensus        24 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~----------~~ev~~~~~~l~~~~~~~   93 (487)
                      ++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||+.+..          ..|+...++.+++++...
T Consensus         1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~   80 (397)
T cd07077           1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV   80 (397)
T ss_pred             ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence            3689999999999999999999999999999999999999999999865432          137777777777776543


Q ss_pred             hhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhh--
Q 011397           94 KHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY--  166 (487)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a--  166 (487)
                      ..... ...     ......+++++|+|||++|+|||||+.     ++||++||+||+|||+.+|.++..+.+++.++  
T Consensus        81 ~~~~~-~~~-----~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~  154 (397)
T cd07077          81 GHIQD-VLL-----PDNGETYVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADA  154 (397)
T ss_pred             Ccccc-eEe-----cCCCceEEEEecceEEEEEeCCCCchHHHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhh
Confidence            32211 100     112356889999999999999999986     89999999999999999999999999998874  


Q ss_pred             --cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHH
Q 011397          167 --MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMI  242 (487)
Q Consensus       167 --lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~  242 (487)
                        +|+++++++++ +.+.+..|+.|+ +|.|+||||+++++.+.+.+.  .+|+++|+||+||+||++|||++.|++.++
T Consensus       155 ~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~~  232 (397)
T cd07077         155 AHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSVH  232 (397)
T ss_pred             cCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHHH
Confidence              89999999997 667889999997 999999999999999988773  689999999999999999999999999999


Q ss_pred             HHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCc
Q 011397          243 MGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGE  322 (487)
Q Consensus       243 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~  322 (487)
                      +++| +| ||.|+++++||||++++|+|+++|++++..                                .+++++.||.
T Consensus       233 ~~~~-~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~--------------------------------~G~~~~~g~~  278 (397)
T cd07077         233 DSKF-FD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV--------------------------------EGLKVPQETK  278 (397)
T ss_pred             Hhhc-cC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh--------------------------------cCcCcCCCce
Confidence            9999 99 999999999999999999999999987763                                2455555552


Q ss_pred             cCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHH----HHHHHHhcCCCCceEEEecCCHHHHHHHHHhccee
Q 011397          323 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIE----DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG  398 (487)
Q Consensus       323 ~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g  398 (487)
                          +.|+.||      +++.+.++|+||||+++++|+|++    +|++++|+++|||+++|||+|.+.++++++++++|
T Consensus       279 ----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G  348 (397)
T cd07077         279 ----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTA  348 (397)
T ss_pred             ----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEE
Confidence                3567775      788999999999999999999996    66678899999999999999999999999999999


Q ss_pred             eEEEcCCccccCCCCCCcccCC--CCCCCCcch-HHHHHHhhhccEEE
Q 011397          399 GLVINDTAVHLAVHSLPFGGVQ--ESGMGAYHG-KFSFDVFSHKKAVL  443 (487)
Q Consensus       399 ~v~iN~~~~~~~~~~~pfGG~~--~SG~g~~~g-~~~l~~~~~~k~v~  443 (487)
                      .|+||+++.+.....+||||.+  .||+|+++| .+++++|++.|+|+
T Consensus       349 ~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~  396 (397)
T cd07077         349 SFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV  396 (397)
T ss_pred             EEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence            9999998765445778999999  899999999 99999999999985

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=100.00  E-value=2.8e-65  Score=553.63  Aligned_cols=380  Identities=19%  Similarity=0.206  Sum_probs=310.6

Q ss_pred             HHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhh--------HHHHHHHHHHHHHH
Q 011397           18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESS--------IYEVALLKTSIKSA   89 (487)
Q Consensus        18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~--------~~ev~~~~~~l~~~   89 (487)
                      +++..+++|++||+.|+.+|.++|.++|+++++.|++++++|++    |+||++.+++        ..|+......++++
T Consensus       287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~~----e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~  362 (715)
T TIGR01092       287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEILA----ENKKDVAAAQGAGYAASLVARLSMSPSKISSL  362 (715)
T ss_pred             HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHH----HHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence            38888999999999999999999999999999999999999974    6677666544        12333344444444


Q ss_pred             HHHHhhhhcCCccccc-----cccCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEEEeCCCCChHHHHHH
Q 011397           90 LKELKHWMTPEKAKTS-----ITTFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALVLKPSEVAPASSSLL  159 (487)
Q Consensus        90 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vvlkps~~~~~~~~~l  159 (487)
                      +..++.+.+.......     ....+...+.+++|+|||++|+||| |+.     ++||++||+||+|||+.+|.++..+
T Consensus       363 ~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~~~~~~~ALaaGN~vvlKpse~tp~t~~~l  441 (715)
T TIGR01092       363 AISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDALVQIASLAIRSGNGLLLKGGKEAARSNAIL  441 (715)
T ss_pred             HHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHHHHHHHHHHHhCCEEEEcCcccchHHHHHH
Confidence            4444444332111000     0011223567899999999999999 987     8999999999999999999999999


Q ss_pred             HHHHhhhcCCC----cEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          160 AKLVGEYMDLS----SIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       160 ~~~l~~alP~g----~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++++.+++|+|    ++++|++..+.+..|..|+ +|+|+||||+.+|+.|++.+.   +|+++|+|||||+||++|||+
T Consensus       442 ~~l~~~alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~dADl  518 (715)
T TIGR01092       442 HKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKSASV  518 (715)
T ss_pred             HHHHHHHcCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCCCCH
Confidence            99999999987    6899986445677787786 999999999999999998874   999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      +.|++.++.++|  ++||.|++++|||||++++|+                        |        .+.++++++.+ 
T Consensus       519 ~~A~~~i~~~~~--~~GQ~C~a~~rvlV~~~i~d~------------------------~--------~~~~~v~~~~~~  564 (715)
T TIGR01092       519 DMAKRIVRDAKC--DYPAACNAMETLLVHKDLLRN------------------------G--------LLDDLIDMLRTE  564 (715)
T ss_pred             HHHHHHHHHHhC--CCCCccccCcEEEEehhhccc------------------------h--------hHHHHHHHHHHC
Confidence            999877777766  559999999999999999985                        0        13455555544 


Q ss_pred             CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHH
Q 011397          314 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE  393 (487)
Q Consensus       314 ~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~  393 (487)
                      ++++ +||...+  .|+.     ..+++|++++||+||||++|++|+|++|||+++|++++||++||||+|.+.++++++
T Consensus       565 Ga~l-~Gg~~~~--~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~  636 (715)
T TIGR01092       565 GVTI-HGGPRFA--AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQ  636 (715)
T ss_pred             CCEE-ECCcchh--heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHH
Confidence            5565 5775432  2332     236789999999999999999999999999999999999999999999999999999


Q ss_pred             hcceeeEEEcCCccccCCCCCCcccCCCCCCCC----cchHHHHHHhhhccEEEEeCCCC
Q 011397          394 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA----YHGKFSFDVFSHKKAVLSRGFIG  449 (487)
Q Consensus       394 ~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~----~~g~~~l~~~~~~k~v~~~~~~~  449 (487)
                      ++++|.|+||+++.  ..+.+||||+|.||+|+    .+|++++++|++.|+|.....++
T Consensus       637 ~i~sG~V~vN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g~~  694 (715)
T TIGR01092       637 HVDSAAVFHNASTR--FSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKGQV  694 (715)
T ss_pred             hCCeeEEEEeCCCC--CCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCCee
Confidence            99999999998643  34678999999999995    47999999999999998887554

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=100.00  E-value=2.7e-65  Score=519.13  Aligned_cols=368  Identities=18%  Similarity=0.191  Sum_probs=305.2

Q ss_pred             HHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH------HHhhcCCCc------chhhHHHHHHHHHHHHHHHHHH
Q 011397           26 LRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDA------LRQDLDKPE------LESSIYEVALLKTSIKSALKEL   93 (487)
Q Consensus        26 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~~ev~~~~~~l~~~~~~~   93 (487)
                      |++||+.|+.+|.++|.++|+++++.|++++++|+++      ++.|+|||.      .++. .|+..+++.++++++..
T Consensus         1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~~a   79 (398)
T TIGR00407         1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIELA   79 (398)
T ss_pred             ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhcCC
Confidence            5788999999999999999999999999999999999      999999993      3455 78999999999987665


Q ss_pred             hhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEEEeCCCCChHHHHHHHHHHh----
Q 011397           94 KHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALVLKPSEVAPASSSLLAKLVG----  164 (487)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~----  164 (487)
                      ..+ . +.........+...+++++|+|||++|+||| |..     ++||++||+||+|||+.+|.++..++++++    
T Consensus        80 ~~~-g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~  156 (398)
T TIGR00407        80 DPV-G-KVIDGRELDSGLTLERVRVPLGVLGVIYEAR-PNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALA  156 (398)
T ss_pred             CCC-c-ccccceecCCCceEEEEEeCcEEEEEEeCCC-chHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHH
Confidence            432 1 1111000112336678999999999999997 544     889999999999999999999999999954    


Q ss_pred             hh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHH
Q 011397          165 EY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRR  240 (487)
Q Consensus       165 ~a-lP~g~v~~v~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~  240 (487)
                      ++ +|+|+||+|+| +.+ .+..|..|+ ||+|+||||+.+++.+++.   ..+|+++|+|||||+||++|||+|.|++.
T Consensus       157 eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~~  233 (398)
T TIGR00407       157 QTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIKV  233 (398)
T ss_pred             HcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHHH
Confidence            66 99999999997 544 677788886 9999999999999988764   35899999999999999999999999999


Q ss_pred             HHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeC
Q 011397          241 MIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHG  320 (487)
Q Consensus       241 i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~g  320 (487)
                      +++|+| .+ ||.|++++|+|||+++||+|+++|++++.++..       .+++      .+.+.+++..         |
T Consensus       234 iv~~~~-~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~-------~~~~------~~~i~~~v~~---------g  289 (398)
T TIGR00407       234 IVNAKT-QR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV-------TIHA------DAYALKLLEL---------G  289 (398)
T ss_pred             HHhhhc-CC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC-------EEec------CHHHHHHHhc---------c
Confidence            999999 75 999999999999999999999999999987632       1221      1334444431         1


Q ss_pred             CccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeE
Q 011397          321 GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL  400 (487)
Q Consensus       321 g~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v  400 (487)
                      |          ||++   +.++++++||+||||++|++|+|++|||+++|++++||+++|||+|.+.++++++++++|.|
T Consensus       290 ~----------~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v  356 (398)
T TIGR00407       290 P----------ATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAV  356 (398)
T ss_pred             C----------cccc---ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEE
Confidence            1          3444   23378999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcCCccccCCCCCCcccCCC-----CCCCCcchHHHHHHhhhcc
Q 011397          401 VINDTAVHLAVHSLPFGGVQE-----SGMGAYHGKFSFDVFSHKK  440 (487)
Q Consensus       401 ~iN~~~~~~~~~~~pfGG~~~-----SG~g~~~g~~~l~~~~~~k  440 (487)
                      +||+++.  ..+..||| .+.     ++.....|+.+++.|+..|
T Consensus       357 ~iN~~~~--~~~~~pfG-~~~~~~~~~~~~~~rg~~~~~~~~~~~  398 (398)
T TIGR00407       357 YHNASTR--FTDGFRFG-FGAEVGISTQKLHARGPMGLEALTSYK  398 (398)
T ss_pred             EEeCCCC--cCCCcccc-cceeeEEecCCCcCCCCcCHHHhcCCC
Confidence            9999764  34567897 332     2334557999999998765

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.7e-65  Score=490.12  Aligned_cols=435  Identities=19%  Similarity=0.304  Sum_probs=391.6

Q ss_pred             chhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN-EREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         5 ~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +..+|++..++.+++++|+++|.+|++.|..+|..+|.+|+++.|+++. +++-+|....+.-.||...++.++-+...+
T Consensus        84 q~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLi  163 (561)
T KOG2455|consen   84 QHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELI  163 (561)
T ss_pred             hhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999999999999999 788889888999999999998755577788


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeec-eEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF-GVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      +.+|+.++.+.++..-+....   ..+......++|+ |.|++|+|+||...      +||| +||+|++|||..+.+++
T Consensus       164 df~R~na~ya~eL~~~qpi~~---~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~lss  239 (561)
T KOG2455|consen  164 DFFRFNAKYASELYAQQPISQ---TKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSS  239 (561)
T ss_pred             HHHHHhHHHHHHhhhcCCccc---cCCCCcceeeccccceeEEecccceeeeccccccChhh-hcceeeecccchhHHHH
Confidence            888988888877765444321   3345777888999 99999999999987      6666 59999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccc------cceeeecCCCCcEE
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL------TPVLLELGGKSPVV  227 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~------~p~~~e~gG~~p~i  227 (487)
                      .++.++++|+ +|+|++|+|+++ ...++.+..++ +.++.||||..+-+.+.+..+.++      .+++.|+||||--+
T Consensus       240 Yii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHf  319 (561)
T KOG2455|consen  240 YIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHF  319 (561)
T ss_pred             HHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEE
Confidence            9999999999 999999999995 45688888886 999999999999999998877753      57999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCC-CC-CCcccccCCHHHHHHHH
Q 011397          228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LE-SKDLSRIVNSNHFARLS  305 (487)
Q Consensus       228 V~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~-~~~~gpl~~~~~~~~~~  305 (487)
                      |+++||++.++...++++| .++||.|.+.+|+||++++++.+.++|.+..+++++||| .| ++.+||+|....+.|++
T Consensus       320 VH~SA~VesvV~~TvrsAf-ey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~  398 (561)
T KOG2455|consen  320 VHASADVESVVSSTVRSAF-EYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLK  398 (561)
T ss_pred             eccccchHHHHHHHHHHHH-hhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHH
Confidence            9999999999999999999 999999999999999999999999999999999999998 66 89999999999999999


Q ss_pred             HHHHHHHcC--CeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCC--HHHHHHHH-hcCCCCceEE
Q 011397          306 KLLDDDKVS--GKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAAY  379 (487)
Q Consensus       306 ~~i~~a~~~--~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~  379 (487)
                      ++|+.|+..  .++++||..+ ..|+|+.|||+..-+|.++++.||+|||||+|+.|+|  ++|+++++ |.++|+|+.+
T Consensus       399 k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGa  478 (561)
T KOG2455|consen  399 KVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGA  478 (561)
T ss_pred             HHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccc
Confidence            999999753  5899999986 5799999999999999999999999999999999975  88999988 5589999999


Q ss_pred             EecCCHHHHHHHHHhcc--eeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEE
Q 011397          380 LFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       380 v~t~d~~~~~~~~~~~~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~  444 (487)
                      ||+.|.+.+++..++++  +|+.+||+-+++......||||...||+. +.||+.-+..|+.++++-.
T Consensus       479 iFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ikE  546 (561)
T KOG2455|consen  479 IFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSIKE  546 (561)
T ss_pred             cccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchhhh
Confidence            99999999999999774  79999999888888899999999999987 5678888888888776543

>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]

Probab=100.00  E-value=1.5e-65  Score=495.93  Aligned_cols=420  Identities=20%  Similarity=0.281  Sum_probs=369.8

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHH
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA   80 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~   80 (487)
                      +++.+++++++++..|+|+|+++|+.||+  +|++++..+|.+.+.++++++++++++|+.+.+++.|.-+.-+.-.-+.
T Consensus       445 ~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagavytlalkthvg  524 (881)
T KOG2452|consen  445 TDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVG  524 (881)
T ss_pred             CCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccceeeeeehhhcC
Confidence            56788999999999999999999999997  5999999999999999999999999999999999999887777656677


Q ss_pred             HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchhhhhhhcCCeEEEeCCCCChHHHHHHH
Q 011397           81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGAIAAGNALVLKPSEVAPASSSLLA  160 (487)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ALaaGN~Vvlkps~~~~~~~~~l~  160 (487)
                      ..++.+||++...++.-.........+.......++++|+|||++|.|||||+...+.+                   ++
T Consensus       525 msi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk-------------------~a  585 (881)
T KOG2452|consen  525 MSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWK-------------------TA  585 (881)
T ss_pred             ceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHH-------------------HH
Confidence            88999999977665542221111111122236778999999999999999999722211                   11


Q ss_pred             HHHhh-----hcCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc-cccceeeecCCCCcEEEcCCC
Q 011397          161 KLVGE-----YMDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       161 ~~l~~-----alP~g~v~~v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~-~~~p~~~e~gG~~p~iV~~da  232 (487)
                      .++..     +--.|++|+++|+. -.++.|..|| |..|-||||+++|+.|++.++. +.|++.+|+||++|.||+.||
T Consensus       586 aclaa~~~k~~e~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iifad~  665 (881)
T KOG2452|consen  586 ACLAAQVLKFAELTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFADC  665 (881)
T ss_pred             HHHHHHHhhhhhhcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEEecC
Confidence            11111     12468999999954 5689999997 9999999999999999998885 579999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |+++|++.-..+.| ++-|..|++..|+||.+++.|+|++++.+..+++++|||+| +++-||--..++..++-+|++.+
T Consensus       666 dl~kav~~~~~~vf-f~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~  744 (881)
T KOG2452|consen  666 DLNKAVQMGMSSVF-FSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHG  744 (881)
T ss_pred             cHHHHHHhhcccee-ecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999999 99999998899999999999998


Q ss_pred             Hc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeC--CHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          312 KV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD--KIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       312 ~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      .+ ++++.+||... ..|.|++|||+++++..|.+.+||-||||+.|.+|+  |++++++.+|.+.+||+++|||+|...
T Consensus       745 v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k  824 (881)
T KOG2452|consen  745 VKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINK  824 (881)
T ss_pred             hccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccch
Confidence            75 67999999864 579999999999999999999999999999999997  588999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      ..++++.+++|+|+||.+.  -.+-..||||+|+||+|...|..++.+|...|+|.+
T Consensus       825 ~l~v~~~l~agtvfvnty~--ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~  879 (881)
T KOG2452|consen  825 ALYVSDKLQAGTVFVNTYN--KTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTF  879 (881)
T ss_pred             hhhhhhhhccceEEEeecc--ccccccCCCCccccccccchhHHHHhhheeeEEEEe
Confidence            9999999999999999964  356778999999999999999999999999999875

>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=6.7e-65  Score=473.00  Aligned_cols=436  Identities=19%  Similarity=0.277  Sum_probs=395.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+++++|-.++.+|.+.+++.|++|++-|-..|..+|.+|++++.|.|+...+-|-+++++|+||-..|.. +|+..-+
T Consensus        42 nn~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaegv-gevqeyv  120 (507)
T KOG2453|consen   42 NNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEGV-GEVQEYV  120 (507)
T ss_pred             CCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhcc-hhHHHHH
Confidence            457899999999999999999999999999999999999999999999999999999999999999999998 9999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++|+...-+.+ .+...+  ....+.-....+-|+|+|++|+.+|||..      ..|+.+||+|++||.|.+|+++.
T Consensus       121 dicdyavglsr~l-~g~i~p--serpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTi  197 (507)
T KOG2453|consen  121 DICDYAVGLSRSL-EGKIFP--SERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTI  197 (507)
T ss_pred             HHHHHhhhhhhhh-CCcccC--CCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHH
Confidence            9999987655443 222211  11222344457889999999999999998      88999999999999999999887


Q ss_pred             HHHHHHhhh-----cCCCcEEEEeCChHhHHHHHhC-CCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397          158 LLAKLVGEY-----MDLSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       158 ~l~~~l~~a-----lP~g~v~~v~g~~~~~~~L~~~-~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      .+-+++.+.     +|.+.....+|+.+.+.++.+. ++..+.||||+..++.+.+...++..+..+|+||+|+.||.+|
T Consensus       198 AvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~ed  277 (507)
T KOG2453|consen  198 AVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNED  277 (507)
T ss_pred             HHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEecc
Confidence            777766554     7999999999999999999888 4999999999999999998888888889999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||+..++...++++. ..+||+|+..+|++||+++||+.+++|+...+++++|+|+| ++.+||+.+++....++.-+++
T Consensus       278 adl~lvvps~lfaav-gtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~vee  356 (507)
T KOG2453|consen  278 ADLNLVVPSTLFAAV-GTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEE  356 (507)
T ss_pred             ccceeeehHHHHHHh-cccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999999 8999999999999999999999


Q ss_pred             HHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          311 DKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       311 a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      ++. ++++++||+.. .+|+|++|||++ ..+|.++..+|.|.||+.|.+|++++||+++-|..+.||+++|||.|...+
T Consensus       357 ak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~ni  435 (507)
T KOG2453|consen  357 AKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNI  435 (507)
T ss_pred             HHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHH
Confidence            975 78999999864 579999999998 899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhc--ceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          389 QQFVETV--SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       389 ~~~~~~~--~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      -++..-.  +.|.|.||-++.+ ...+..|||.|.+|.|++.|.+++++|+++.+..+..
T Consensus       436 frw~gpkgsdcgivnvniptsg-aeiggafggek~tgggresgsdswkqymrrstctiny  494 (507)
T KOG2453|consen  436 FRWMGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINY  494 (507)
T ss_pred             HhhhCCCCCccceEEecCCCCc-hhhcccccCccccCCCcccCchHHHHHHhhceeeeec
Confidence            9888755  6899999987643 5677789999999999999999999999999887764

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.2e-37  Score=301.22  Aligned_cols=387  Identities=18%  Similarity=0.197  Sum_probs=304.8

Q ss_pred             HHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCC----CcchhhHHHHHHHHHHHHHHHHH
Q 011397           17 EAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK----PELESSIYEVALLKTSIKSALKE   92 (487)
Q Consensus        17 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk----~~~~a~~~ev~~~~~~l~~~~~~   92 (487)
                      .++.+..++|+.|...+..++.++|.+.|.++++.|+++.++|.++..+|.-.    ...++....+...-..++.+++-
T Consensus         3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g   82 (417)
T COG0014           3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG   82 (417)
T ss_pred             hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence            45778889999999999999999999999999999999999999988776432    23344334444444555555555


Q ss_pred             HhhhhcCC-----ccccccccCCCcceEeeeeceEEEEEcCCCcchh----hhhhhcCCeEEEeCCCCChHHHHHHHHHH
Q 011397           93 LKHWMTPE-----KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF----VGAIAAGNALVLKPSEVAPASSSLLAKLV  163 (487)
Q Consensus        93 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~----~~ALaaGN~Vvlkps~~~~~~~~~l~~~l  163 (487)
                      ++....-.     .........+.+.+..+.|+||+++|.....-+.    ..+|++||+||+|.+..+..++..+.+++
T Consensus        83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i  162 (417)
T COG0014          83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVI  162 (417)
T ss_pred             HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHH
Confidence            54432211     1111112233477889999999999987544444    78999999999999999999999999988


Q ss_pred             hhh-----cCCCcEEEEeC-ChHhHHHHHhCC--CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          164 GEY-----MDLSSIRVVEG-AVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       164 ~~a-----lP~g~v~~v~g-~~~~~~~L~~~~--v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      +++     +|.++||+++. +.+....|++..  +|.|+..||...-+.+.+.+.   .||+-.+-|++.++|+.+||+|
T Consensus       163 ~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~ADld  239 (417)
T COG0014         163 QEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDESADLD  239 (417)
T ss_pred             HHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecccCCHH
Confidence            775     79999999998 778888888764  999999999998888877665   8999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCC
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG  315 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~  315 (487)
                      +|.+-+++++. . -.-.|++.+.++||+.+.++|+..|.+.+....                                 
T Consensus       240 ~A~~ii~nAKt-q-rPs~CNA~EtLLVh~~ia~~fLp~l~~~l~~~g---------------------------------  284 (417)
T COG0014         240 KALKIIVNAKT-Q-RPSVCNAAETLLVHRAIAKSFLPKLANALQEAG---------------------------------  284 (417)
T ss_pred             HHHHHHHcccC-C-CCcccchHHHHHcCHHHHHHhHHHHHHHHHhcC---------------------------------
Confidence            99999999998 4 455899999999999999999999998776321                                 


Q ss_pred             eEeeCCccCCCCceeecEEEec--CCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHH
Q 011397          316 KIVHGGERDKNKLRIAPTLLLD--VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE  393 (487)
Q Consensus       316 ~~~~gg~~~~~g~~~~Ptv~~~--~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~  393 (487)
                      .-+.|....   .    .++..  .+....-+..|...+++.|..++++++||+++|..+.+||-+|.|+|...+++|..
T Consensus       285 velr~d~~~---~----~~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~  357 (417)
T COG0014         285 VELRGDAEA---L----ALLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVN  357 (417)
T ss_pred             eEEEcCHHH---H----HhccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHh
Confidence            111111100   0    01111  22233447889999999999999999999999999999999999999999999999


Q ss_pred             hcceeeEEEcCCccccCCCCCCcccCCCCC--CCCcchHHHHHHhhhccEEEEeCCC
Q 011397          394 TVSAGGLVINDTAVHLAVHSLPFGGVQESG--MGAYHGKFSFDVFSHKKAVLSRGFI  448 (487)
Q Consensus       394 ~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG--~g~~~g~~~l~~~~~~k~v~~~~~~  448 (487)
                      .+++..|+||.++.+.....+.||+.-.-.  -.+-.|+.|++++|..|++..+..+
T Consensus       358 ~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~Gq  414 (417)
T COG0014         358 EVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGDGQ  414 (417)
T ss_pred             hcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCCce
Confidence            999999999999877666667777643222  2345699999999999999887654

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=100.00  E-value=5.5e-33  Score=286.04  Aligned_cols=357  Identities=17%  Similarity=0.159  Sum_probs=246.5

Q ss_pred             CHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh----CHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHH--H
Q 011397           15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNE----REPDIVDALRQDLDKPELESSIYEVALLKTSIK--S   88 (487)
Q Consensus        15 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~----~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~--~   88 (487)
                      +..++++.++..+...+....++.++..+++.++++.+..    .+.+..+.+..-+|.+..... ..+......++  .
T Consensus         3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~-~a~~~l~~~~~r~~   81 (422)
T cd07080           3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLR-EGLKRLMALFRREN   81 (422)
T ss_pred             CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHH-HHHHHHHHHcCHHH
Confidence            4455666666666665666777888888888777777753    345555666666776644333 33222222221  0


Q ss_pred             HHHHHhhhhc-CCccccccccCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEEEeCCCCChHHHHHHHHH
Q 011397           89 ALKELKHWMT-PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALVLKPSEVAPASSSLLAKL  162 (487)
Q Consensus        89 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vvlkps~~~~~~~~~l~~~  162 (487)
                      ....+...+. ..... .+...+...+++++|+||+++|+|||||+.     ++||++||++|+|||+.+|.++..+.++
T Consensus        82 l~~~l~~el~~~~~Ld-~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~  160 (422)
T cd07080          82 LERILERELGSPGILD-EWVPPGRGGYIRAQPRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRS  160 (422)
T ss_pred             HHHHHHHhcCCccccc-CCccCCCCCeeEEcCCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHHHH
Confidence            1011111111 00000 011113466789999999999999999997     8999999999999999999999999999


Q ss_pred             HhhhcCC----CcEEEE--eCC-hHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCC-CcEEEcCCC--
Q 011397          163 VGEYMDL----SSIRVV--EGA-VAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK-SPVVFDSGI--  232 (487)
Q Consensus       163 l~~alP~----g~v~~v--~g~-~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~-~p~iV~~da--  232 (487)
                      +.+++|+    +.++++  +|+ .+.++.|++++ |.|+||||+++++.|++.++.+  +.++|+||| +++|+++++  
T Consensus       161 l~~~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~-D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~  237 (422)
T cd07080         161 LADVDPNHPLTDSISVVYWPGGDAELEERILASA-DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALE  237 (422)
T ss_pred             HHhcCCCCcccceEEEEEecCCchHHHHHHHHhC-CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhc
Confidence            9999888    888998  454 44788899888 9999999999999999988865  568999999 566666678  


Q ss_pred             --CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCc---HHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHH
Q 011397          233 --NLKVACRRMIMGKWGCNNGQACISPDHIITTKDY---APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKL  307 (487)
Q Consensus       233 --Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i---~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~  307 (487)
                        |++.+++.++++++ .++||.|.|+++||||+++   +++|.++|.++++++....|...     . +.....++...
T Consensus       238 ~~dl~~aa~~~a~~~~-~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~~-----~-~~~~~~~~~~~  310 (422)
T cd07080         238 SEKLAEVADALAEDIC-RYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPALS-----L-SAAESAKIARA  310 (422)
T ss_pred             cccHHHHHHHHHHHHH-HHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCCC-----C-CHHHHHHHHHH
Confidence              99999999999999 9999999999999999999   99999999999998754433211     1 22232222222


Q ss_pred             HHHHH-cCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          308 LDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       308 i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      -..+. .+.+....+   ..++    +|+....+.  +.. ...+=.+.|.++++++|++..++.  +=.|++++..+.+
T Consensus       311 r~~~~~~~~~~~~~~---~~~~----~v~~~~~~~--~~~-~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~  378 (422)
T cd07080         311 RLEAEFYELKGGVSR---DLGW----TVIISDEIG--LEA-SPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAE  378 (422)
T ss_pred             HHHHHHHHHhcCCCC---CCCe----EEEEeCCCC--ccC-CCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhh
Confidence            11111 111111011   1122    233222221  111 344557888999999999999886  5569999999988


Q ss_pred             HHHHHHHhcc
Q 011397          387 LKQQFVETVS  396 (487)
Q Consensus       387 ~~~~~~~~~~  396 (487)
                      . .++++++.
T Consensus       379 ~-~~~~~~l~  387 (422)
T cd07080         379 L-AELADALA  387 (422)
T ss_pred             H-HHHHHHHH
Confidence            7 77777775

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.97  E-value=1.9e-29  Score=235.79  Aligned_cols=380  Identities=23%  Similarity=0.249  Sum_probs=279.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH------hhcCCCcchhhHHHHHHHHHHHHHHHHH
Q 011397           19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALR------QDLDKPELESSIYEVALLKTSIKSALKE   92 (487)
Q Consensus        19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~------~e~Gk~~~~a~~~ev~~~~~~l~~~~~~   92 (487)
                      +++..+.|+++.+.++.++.++|.++|.+++++|..+..++..+..      +|.|.  .++....+...-..+.....-
T Consensus         2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL--~~sll~RL~l~~~K~~sl~~g   79 (433)
T KOG4165|consen    2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGL--AESLLKRLDLSPGKISSLAAG   79 (433)
T ss_pred             HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCc--cHHHHHHhcCChHHHHHHHHH
Confidence            4567788999999999999999999999999999988777665543      34553  333222333223334433333


Q ss_pred             HhhhhcCCcc--c---cccccCCCcceEeeeeceEEEEEcCCCcchh----hhhhhcCCeEEEeCCCCChHHHHHHHHHH
Q 011397           93 LKHWMTPEKA--K---TSITTFPSSAEIVPEPFGVVLIISPWNYPFF----VGAIAAGNALVLKPSEVAPASSSLLAKLV  163 (487)
Q Consensus        93 ~~~~~~~~~~--~---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~----~~ALaaGN~Vvlkps~~~~~~~~~l~~~l  163 (487)
                      ++.....+..  .   ......+-..+....|+||.++|.....-..    ..|+++||.+++|....+..+...|.+++
T Consensus        80 ~~~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v  159 (433)
T KOG4165|consen   80 LRQIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLV  159 (433)
T ss_pred             HHHHHhcccchhhheeeeeccCCceEEEeeccceEEEEEeccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHH
Confidence            3332221111  1   0111223356677889999999987654444    77999999999999999999999999999


Q ss_pred             hhhc-----CCCcEEEEeCChHhHHHHHhC-C-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHH
Q 011397          164 GEYM-----DLSSIRVVEGAVAETSALLDQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV  236 (487)
Q Consensus       164 ~~al-----P~g~v~~v~g~~~~~~~L~~~-~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~  236 (487)
                      ++++     |.+.|++|... +....|++. . ||+|+..||..-.+.|.....   .||..+..|.+.++|++|||+++
T Consensus       160 ~~al~~~~~~~~aV~LV~sR-Eev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~~k  235 (433)
T KOG4165|consen  160 QEALGTHGGPGKAVQLVTSR-EEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADLDK  235 (433)
T ss_pred             HHHhhhccCchhhhhheecH-HHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCHHH
Confidence            9873     77889999764 444555554 4 999999999999998876543   89999999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCccccCCEEEEcCCc-HHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCC
Q 011397          237 ACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG  315 (487)
Q Consensus       237 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~  315 (487)
                      |.+.+..+++  +....|++.+.+++|++. ...|.+.+...+.                                 .++
T Consensus       236 A~riv~DaK~--dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~---------------------------------~~g  280 (433)
T KOG4165|consen  236 AKRIVRDAKC--DYPAACNAMETLLIHKDLEQSPFFDDLINMLK---------------------------------EEG  280 (433)
T ss_pred             HHHHHhcccC--CCchhhhhHHHHhccHhhhhcchHHHHHHHHH---------------------------------hcC
Confidence            9999999987  777899999999999973 2334433333222                                 234


Q ss_pred             eEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc
Q 011397          316 KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV  395 (487)
Q Consensus       316 ~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~  395 (487)
                      .-+++|..-..       ++.--++...-++.|.-.-.+++-.+++.++||+.+|..+.+|+-+|.|+|.+.+++|...+
T Consensus       281 Vtl~agpkl~~-------~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~V  353 (433)
T KOG4165|consen  281 VTLHAGPKLAA-------LLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHV  353 (433)
T ss_pred             eEEecChhHHh-------hcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhcc
Confidence            44444432100       11111445556888988889999999999999999999999999999999999999999999


Q ss_pred             ceeeEEEcCCccccCCCCCCcccCCCCC--CCCc--chHHHHHHhhhccEEEEeCCC
Q 011397          396 SAGGLVINDTAVHLAVHSLPFGGVQESG--MGAY--HGKFSFDVFSHKKAVLSRGFI  448 (487)
Q Consensus       396 ~~g~v~iN~~~~~~~~~~~pfGG~~~SG--~g~~--~g~~~l~~~~~~k~v~~~~~~  448 (487)
                      ++..|+.|.++.+.  .++-||=--+-|  +++.  .|+.|++.++..||+..++.+
T Consensus       354 DSa~vf~NASTRFa--DGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG~gq  408 (433)
T KOG4165|consen  354 DSACVFHNASTRFA--DGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRGKGQ  408 (433)
T ss_pred             chhheeeccccccc--ccccccccceeeeeccceeccCCccccceeeeeeEEecCCc
Confidence            99999999987643  444453212233  3444  599999999999999888754

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=99.76  E-value=5.1e-15  Score=150.86  Aligned_cols=368  Identities=18%  Similarity=0.177  Sum_probs=225.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHhC--HHHHHHHHHhhcCCCcchhhHHHHHHHHH-----HHHHHHHHHhhhhcCCccccccc
Q 011397           35 TKSYGWRVSQLKSLMKMLNER--EPDIVDALRQDLDKPELESSIYEVALLKT-----SIKSALKELKHWMTPEKAKTSIT  107 (487)
Q Consensus        35 ~~~~~~R~~~L~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~~~ev~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~  107 (487)
                      .+|.++..++|.++++.+...  .....+.+..-+|.+..... . +.....     .|...++.  ++..+......  
T Consensus         2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~-~-l~~~~~~~~r~~L~~~l~~--el~~~~~Ld~~--   75 (399)
T PF05893_consen    2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVE-Y-LEALMRWFRRENLERKLER--ELGNPESLDGW--   75 (399)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHH-H-HHHHHHhcCHHHHHHHHHH--hcCCHhHhhcc--
Confidence            356666666666666666653  22245555555666554432 1 222211     11111110  11101111000  


Q ss_pred             cCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCC----CcEEEEe--
Q 011397          108 TFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL----SSIRVVE--  176 (487)
Q Consensus       108 ~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~----g~v~~v~--  176 (487)
                      ......+.++.|.|+++.|.|.|-|+.     +.+|.+||..|+|+|...+.++..+.+.+.+..|.    ..+.++.  
T Consensus        76 ~~~~~~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~~~i~v~~~~  155 (399)
T PF05893_consen   76 VPRGDGYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLADSIAVVYWP  155 (399)
T ss_pred             cccccchhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhhhcEEEEEec
Confidence            011136678999999999999999998     88999999999999999999999999999887664    4567773  


Q ss_pred             C-ChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCCccc
Q 011397          177 G-AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACI  255 (487)
Q Consensus       177 g-~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~  255 (487)
                      + +.+..+.+. ...|.++..||.++.+.+.+ .....++.+....-.|-.+|+.+++++.+++.++.-.+ ...+|.|.
T Consensus       156 ~~d~~~~~~~~-~~~D~vv~wGgd~ti~~ir~-~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~-~~dQ~aCs  232 (399)
T PF05893_consen  156 GGDEELEEALS-QQADAVVAWGGDETIRAIRQ-PLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIF-LFDQQACS  232 (399)
T ss_pred             CCchHHHHHHH-HHCCEEEEeCCHHHHHHHHH-HcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHH-HhhCcccC
Confidence            4 333444444 44699999999999999988 33344666767777888999999999999999999999 99999999


Q ss_pred             cCCEEEEcC---CcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHH-----HHcCCeEeeCCccCCCC
Q 011397          256 SPDHIITTK---DYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDD-----DKVSGKIVHGGERDKNK  327 (487)
Q Consensus       256 a~~~v~V~~---~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~-----a~~~~~~~~gg~~~~~g  327 (487)
                      |++.|||..   .-.++|.++|.+.+.+..---|..      ..+......+....+.     +..+...+.++.   ++
T Consensus       233 Sp~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~---~~  303 (399)
T PF05893_consen  233 SPQVIFVETGDGDSVEEFAERLAEALERAAERYPRG------ELSIDEAAAISSLRAEAELRYALDGEYRVWSSD---DN  303 (399)
T ss_pred             CCeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCc------CCCHHHHHHHHHHHHHHHHHHHhcCCcceeecC---CC
Confidence            999999993   345788888877777653221211      0122222222222222     222332222222   11


Q ss_pred             ceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeeEEEcCCc
Q 011397          328 LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTA  406 (487)
Q Consensus       328 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~-~~g~v~iN~~~  406 (487)
                      .+   ||+....  +. ......+=.+.|.++++++|++.+++....=.|++++.... ....+++.+ ..|.--|=   
T Consensus       304 ~~---~V~~~~~--~~-~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~~-~~~~~~~~l~~~Gv~Riv---  373 (399)
T PF05893_consen  304 SW---TVIVSPE--PP-LLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWSE-RLEELARALAAAGVDRIV---  373 (399)
T ss_pred             CE---EEEECCC--cc-cccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecChh-hHHHHHHHHHhcCCeeeC---
Confidence            12   3443222  12 22233355889999999999999999875423888876554 455555533 34432222   


Q ss_pred             cccCCCCCCcccCCCCCC-CCcchHHHHHHhhh
Q 011397          407 VHLAVHSLPFGGVQESGM-GAYHGKFSFDVFSH  438 (487)
Q Consensus       407 ~~~~~~~~pfGG~~~SG~-g~~~g~~~l~~~~~  438 (487)
                              |.|-+..--. +.+-|.+.+..|++
T Consensus       374 --------~~G~m~~~~~g~~hDG~~~L~~lvR  398 (399)
T PF05893_consen  374 --------PLGQMLDFDPGWPHDGMYPLRRLVR  398 (399)
T ss_pred             --------CCCcCCCCCCCCCcCCHhHHHHHhC
Confidence                    2222211111 24457777877764

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]

Probab=99.41  E-value=3.9e-13  Score=111.31  Aligned_cols=143  Identities=22%  Similarity=0.283  Sum_probs=111.6

Q ss_pred             HHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH--cCCeEeeCCccCCCCceeecEEEecCCCCCcc
Q 011397          268 PKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLI  344 (487)
Q Consensus       268 ~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~--~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~  344 (487)
                      ....+.|++..+.+++-+... .++.     .+..+++.++++...  .+..+..-|  ..+|+|+.||++. ++|+|.+
T Consensus         9 ksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~--ya~~~f~~~tiLs-vtP~ms~   80 (157)
T KOG2449|consen    9 KSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPG--YAEGNFVGPTILS-VTPNMSC   80 (157)
T ss_pred             hhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeec--cccCCcccceEEE-ecCCcce
Confidence            455667777778887755444 4555     556678888887521  111222212  2478999999998 9999999


Q ss_pred             cccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccC
Q 011397          345 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGV  419 (487)
Q Consensus       345 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~  419 (487)
                      +.||+||||+....-++++|+|.++|+++||....|||.+.+.++.+....++|.|-+|... ....+...|.|.
T Consensus        81 ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~i-p~ilk~~sfsg~  154 (157)
T KOG2449|consen   81 YKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPI-PVILKMFSFSGD  154 (157)
T ss_pred             eHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccc-cccccceecccc
Confidence            99999999999999999999999999999999999999999999999999999999999854 234455556554

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=99.30  E-value=4.7e-11  Score=108.69  Aligned_cols=166  Identities=10%  Similarity=0.138  Sum_probs=127.7

Q ss_pred             CCcEEEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHH
Q 011397          223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFA  302 (487)
Q Consensus       223 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~  302 (487)
                      ..-+||++|.|++.|+..++.+.   ...-...+.-.|+|||++.|+|+++++.+++.+.-.          +.+...+.
T Consensus         5 P~lMIvfe~GDlnsA~~~L~~sl---~~Pf~~~~VatVlVqEsireefi~rvr~~m~pl~~~----------va~Hpny~   71 (215)
T PF07368_consen    5 PQLMIVFEDGDLNSAMHYLLESL---HNPFAPGAVATVLVQESIREEFIERVRSRMKPLSPQ----------VANHPNYL   71 (215)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHH---hCcccCCcEEEEEEeHHHHHHHHHHHHHhCccCChh----------hccCcHHH
Confidence            34589999999999999999984   456677899999999999999999999988765311          22334455


Q ss_pred             HHHHHHHHHHcCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcC--CCCceEEE
Q 011397          303 RLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG--TKPLAAYL  380 (487)
Q Consensus       303 ~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~gl~~~v  380 (487)
                      +..+.++.  -+.+.+.++... .-..-.|.++.+.+..  .+.. -..+|+++..|++..||+++++..  +++ +++|
T Consensus        72 rsl~~i~~--l~~~~I~~~~~~-~~~~aSPilV~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsi  144 (215)
T PF07368_consen   72 RSLKKIKC--LNAKTIVADFEN-VPPPASPILVCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVSI  144 (215)
T ss_pred             HHHHHHHh--cCCeEEEecccC-CCCCCCCEEEcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEE
Confidence            55555554  467777764321 1123358888876664  2333 556899999999999999999985  444 9999


Q ss_pred             ecCCHHHHHHHHHhcceeeEEEcCCccc
Q 011397          381 FTNNKKLKQQFVETVSAGGLVINDTAVH  408 (487)
Q Consensus       381 ~t~d~~~~~~~~~~~~~g~v~iN~~~~~  408 (487)
                      |++..+.+-+++.+++...++|||....
T Consensus       145 W~ekla~~Yel~~~l~~~~f~iNC~~V~  172 (215)
T PF07368_consen  145 WNEKLASAYELAARLPCDTFYINCFNVD  172 (215)
T ss_pred             eCcHHHHHHHHHHhCCCCEEEEEeccCC
Confidence            9999999999999999999999997654

The function of this family is unknown.

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=97.97  E-value=4.1e-05  Score=88.33  Aligned_cols=102  Identities=19%  Similarity=0.139  Sum_probs=77.2

Q ss_pred             cCCCcceEeeeeceEEEEEcCCCcchh---hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcEEEEeCChHhHHH
Q 011397          108 TFPSSAEIVPEPFGVVLIISPWNYPFF---VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSA  184 (487)
Q Consensus       108 ~~~~~~~~~~~P~GVv~~i~p~n~P~~---~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~~v~g~~~~~~~  184 (487)
                      ..++.+.....|.|++++++|||-.+.   ..||++||+||+||++.++.        +...+|..+.+.+    ..+..
T Consensus      1067 PTGEsN~L~l~~RG~vlcisp~~~~~l~Qi~AALaaGn~vi~~~~~~~~~--------~~~~Lp~~~~~~~----~~~~~ 1134 (1208)
T PRK11905       1067 PTGESNLLSLHPRGRVLCVADTEEALLRQLAAALATGNVAVVAADSGLAA--------ALADLPGLVAARI----DWTQD 1134 (1208)
T ss_pred             CCCcceeEEecCCceEEEECCcHHHHHHHHHHHHHhCCEEEEeCCcccHH--------HHHhCcccccccc----ccccc
Confidence            345688999999999999999996665   89999999999999988662        1112565555444    22345


Q ss_pred             HHhCC-CCeEEEecCHHHHHHHHHHHhccc---cceeeecC
Q 011397          185 LLDQK-WDKICYTGNSRVARIVMAAAAKHL---TPVLLELG  221 (487)
Q Consensus       185 L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~---~p~~~e~g  221 (487)
                      +..++ ++.|.|+|++++.+.+.+..+++.   .|++.|..
T Consensus      1135 ~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905       1135 WEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred             cccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence            66665 999999999999999998888763   45555554

>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E

Probab=97.21  E-value=0.31  Score=49.37  Aligned_cols=255  Identities=21%  Similarity=0.239  Sum_probs=137.9

Q ss_pred             CCcceEeeeeceEEEEEcCCC---cchh-----hhhhhcCCe--EEEeCCCCC-hHHHHHHHHHHhhhcCCCcEEEEe-C
Q 011397          110 PSSAEIVPEPFGVVLIISPWN---YPFF-----VGAIAAGNA--LVLKPSEVA-PASSSLLAKLVGEYMDLSSIRVVE-G  177 (487)
Q Consensus       110 ~~~~~~~~~P~GVv~~i~p~n---~P~~-----~~ALaaGN~--Vvlkps~~~-~~~~~~l~~~l~~alP~g~v~~v~-g  177 (487)
                      +.....++.|+--|++..|.-   ||-.     +||-.+|+.  |++-|.... ......|+-+ +.   .|+=.+.. |
T Consensus        83 G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa-~~---~Gv~eiy~vG  158 (390)
T cd06572          83 GVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAA-KL---AGVDEIYKVG  158 (390)
T ss_pred             CcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHH-HH---cCCcEEeccC
Confidence            346678899999999998854   4433     889999984  445555431 1222222211 11   12222222 3


Q ss_pred             ChHhHHHHHh----CC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCC--cEEEcCCCCHHHHHHHHHHHhcccCC
Q 011397          178 AVAETSALLD----QK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS--PVVFDSGINLKVACRRMIMGKWGCNN  250 (487)
Q Consensus       178 ~~~~~~~L~~----~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~--p~iV~~daDl~~aa~~i~~~~~~~~~  250 (487)
                      +.....+|.-    -+ ||.|+=.|..-+..+= +..... . -+=-..|.+  -+|-|++||.+..+..++.-+=  +.
T Consensus       159 GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK-~~v~g~-V-~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAE--H~  233 (390)
T cd06572         159 GAQAIAALAYGTETIPKVDKIVGPGNIYVTAAK-RLVSGD-V-GIDMPAGPSEVLVIADETANPEFVAADLLSQAE--HD  233 (390)
T ss_pred             CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHH-HHhcCC-c-CccCCCCCceEEEEeCCCCCHHHHHHHHHhhhc--cC
Confidence            5555555542    23 8999877755432211 111110 0 011123444  3455666999999988877654  22


Q ss_pred             CCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCcee
Q 011397          251 GQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRI  330 (487)
Q Consensus       251 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~  330 (487)
                      .    ..+.++|..+  .++.+++.+.+.+....          +...   +...+-+.   .                 
T Consensus       234 ~----~a~aiLvT~s--~~la~~V~~~v~~ql~~----------l~r~---~~~~~~~~---~-----------------  274 (390)
T cd06572         234 P----DSQAILVTTS--EELAEAVEEEVERQLAE----------LPRR---EIAAKSLL---D-----------------  274 (390)
T ss_pred             C----CCeEEEEECC--HHHHHHHHHHHHHHHHh----------CCcH---HHHHHHHH---h-----------------
Confidence            2    2345666555  34555555444432100          0000   01111111   0                 


Q ss_pred             ecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeeEEEcCCcccc
Q 011397          331 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVHL  409 (487)
Q Consensus       331 ~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~-~~g~v~iN~~~~~~  409 (487)
                                            --.++.++|++|+++++|..-.- -.-|.++|..   .+..++ ++|.|++..++.-.
T Consensus       275 ----------------------~g~ii~~~~~~eai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGsiFlG~~tp~a  328 (390)
T cd06572         275 ----------------------YGAIILVDDLEEAIELANEYAPE-HLELQTEDPE---ELLEKIRNAGSIFLGPYTPEA  328 (390)
T ss_pred             ----------------------CCEEEEECCHHHHHHHHHhhchh-hheeHhcCHH---HHHhhCccceEEeecCCCchh
Confidence                                  01124568999999999995332 3467888875   455555 68999998754311


Q ss_pred             -------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          410 -------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       410 -------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                             .++.+|.+     |..++.+..+...|+++-++.
T Consensus       329 ~GDY~aGpNHvLPT~-----G~Ar~~sgL~v~~F~K~~s~~  364 (390)
T cd06572         329 LGDYAAGPNHVLPTG-----GTARFYSGLSVDDFLKRITVQ  364 (390)
T ss_pred             hhccccCCCCccCCC-----cceeecCCCCHHHheecceeE
Confidence                   24445554     567777778889998766544

C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.

>TIGR00069 hisD histidinol dehydrogenase

Probab=97.13  E-value=0.27  Score=49.66  Aligned_cols=253  Identities=21%  Similarity=0.240  Sum_probs=137.4

Q ss_pred             CcceEeeeeceEEEEEcCCC---cchh-----hhhhhcCCe--EEEeCCCC-ChHHHHHHHHHHhhhcCCCcEEEEe-CC
Q 011397          111 SSAEIVPEPFGVVLIISPWN---YPFF-----VGAIAAGNA--LVLKPSEV-APASSSLLAKLVGEYMDLSSIRVVE-GA  178 (487)
Q Consensus       111 ~~~~~~~~P~GVv~~i~p~n---~P~~-----~~ALaaGN~--Vvlkps~~-~~~~~~~l~~~l~~alP~g~v~~v~-g~  178 (487)
                      .....++.|+.-|++..|.-   ||-.     +||-.+|+.  |++-|... .......|+.+ +.+   |+=.+.. |+
T Consensus        80 v~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA-~~~---Gv~eIy~vGG  155 (393)
T TIGR00069        80 VILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLAAA-KLA---GVDEVYKVGG  155 (393)
T ss_pred             eEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHHHH-HHc---CCCeehhcCC
Confidence            46677899999999999863   4544     889999984  44555532 11222223321 111   1111222 35


Q ss_pred             hHhHHHHH---hC-C-CCeEEEecCHHHHHHHHHHHhccccceeee-cCCCC--cEEEcCCCCHHHHHHHHHHHhcccCC
Q 011397          179 VAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKS--PVVFDSGINLKVACRRMIMGKWGCNN  250 (487)
Q Consensus       179 ~~~~~~L~---~~-~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e-~gG~~--p~iV~~daDl~~aa~~i~~~~~~~~~  250 (487)
                      .....+|.   +. + ||.|+=.|..-+..+  +.... + .|-.. ..|.+  .+|-|++||.+..+..++.-+= . .
T Consensus       156 AQAIAAlAyGTesIp~VDkIvGPGN~yV~~A--K~~v~-g-~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAE-H-d  229 (393)
T TIGR00069       156 AQAIAALAYGTETVPKVDKIVGPGNIYVTAA--KKLVF-G-DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAE-H-D  229 (393)
T ss_pred             HHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhc-C-ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc-c-C
Confidence            55555554   22 3 999987776543221  11110 1 11111 23555  3455667999999988887654 2 2


Q ss_pred             CCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCcee
Q 011397          251 GQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRI  330 (487)
Q Consensus       251 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~  330 (487)
                      .    ..+.++|..+  .++.+++.+.+.+....          +.   ..    +..+.+...                
T Consensus       230 ~----~a~~iLvT~s--~~la~~V~~~v~~ql~~----------l~---r~----~i~~~al~~----------------  270 (393)
T TIGR00069       230 P----DAQAILVTTS--EELAEAVQEEIERQLAT----------LP---RR----EIARKSLED----------------  270 (393)
T ss_pred             C----CCcEEEEECC--HHHHHHHHHHHHHHHHh----------CC---hH----HHHHHHHHh----------------
Confidence            2    2445666554  34444444443322100          00   11    122221110                


Q ss_pred             ecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeeEEEcCCcccc
Q 011397          331 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVHL  409 (487)
Q Consensus       331 ~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~-~~g~v~iN~~~~~~  409 (487)
                                         +|   .++.++|++||++++|..-.- -.-|.++|..   .+..++ ++|.|++..++.-.
T Consensus       271 -------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~---~~l~~I~nAGaiFlG~~tp~a  324 (393)
T TIGR00069       271 -------------------NG---AIILVDDLEEAIEISNDYAPE-HLELQTKNPE---ELLPKIRNAGSIFLGPYTPEA  324 (393)
T ss_pred             -------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhcCccceeccCCCCchh
Confidence                               11   124568999999999995333 2347788874   555566 58999998754321


Q ss_pred             -------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          410 -------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       410 -------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                             .++.+|-     +|..++.+.-+.+.|.++-++.
T Consensus       325 ~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s~~  360 (393)
T TIGR00069       325 AGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRITVQ  360 (393)
T ss_pred             hhhccCCCCcccCC-----CcceeecCCccHHHhccceeEE
Confidence                   2334444     4667888888899997766544

This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.

>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]

Probab=97.05  E-value=0.45  Score=48.27  Aligned_cols=279  Identities=21%  Similarity=0.266  Sum_probs=149.7

Q ss_pred             HHHHHHHHHHhhhhcCCcccc--ccccCCCcceEeeeeceEEEEEcC---CCcchh-----hhhhhcCCe--EEEeCCCC
Q 011397           84 TSIKSALKELKHWMTPEKAKT--SITTFPSSAEIVPEPFGVVLIISP---WNYPFF-----VGAIAAGNA--LVLKPSEV  151 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p---~n~P~~-----~~ALaaGN~--Vvlkps~~  151 (487)
                      +.++..+++++.+...+....  .....+.....++.|+--|++..|   .-||-.     +||-.+|+.  |+.-|.+.
T Consensus        79 eai~~A~~~I~~fH~~Q~p~~~~~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp~~  158 (425)
T COG0141          79 EALEVAAENIEAFHEAQLPKDWLVETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPPPK  158 (425)
T ss_pred             HHHHHHHHHHHHHHHhhCCCccceeccCCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCCCC
Confidence            344555555555544333211  111223366778999999999988   556655     899999984  44555554


Q ss_pred             ChHHHHHHH--HHHhhhcCCCcEEEEeCChHhHHHHHhC-----CCCeEEEecCHHHHHHHHHHHhccccceeeecCCCC
Q 011397          152 APASSSLLA--KLVGEYMDLSSIRVVEGAVAETSALLDQ-----KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS  224 (487)
Q Consensus       152 ~~~~~~~l~--~~l~~alP~g~v~~v~g~~~~~~~L~~~-----~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~  224 (487)
                      .-.....|+  +++.  . ..+++  -|+.....+|.-.     +||.|+=.|+.-+..+  +....... -+=-..|.+
T Consensus       159 ~gv~p~iL~AA~~~G--v-~eIy~--vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~g~V-~ID~~AGPS  230 (425)
T COG0141         159 DGVNPEILAAARLAG--V-DEVYK--VGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVSGVV-GIDMIAGPS  230 (425)
T ss_pred             CCCCHHHHHHHHHhC--c-HHHHH--ccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhhCCc-ccCCCCCCc
Confidence            211111121  2111  0 01111  1354555555421     3899988887643221  11111100 011113444


Q ss_pred             c--EEEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHH
Q 011397          225 P--VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFA  302 (487)
Q Consensus       225 p--~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~  302 (487)
                      =  +|-|++||.+..+..++.-+= .+-     ..+.|+|..+  ++|.+++.+.+.+..-.          +   ...+
T Consensus       231 EvlViAD~ta~p~~vA~DLLsQAE-Hd~-----~a~aiLvT~s--~~la~~v~~~v~~~l~~----------l---~~~e  289 (425)
T COG0141         231 EVLVIADETANPDFVAADLLSQAE-HDP-----DAQAILVTDS--EELAEAVEAAVERQLET----------L---PRAE  289 (425)
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHhh-cCC-----CceEEEEeCc--HHHHHHHHHHHHHHHHh----------c---cHHH
Confidence            3  445666999999988877654 322     2455666655  56666666555432100          0   0011


Q ss_pred             HHHHHHHHHHcCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEec
Q 011397          303 RLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT  382 (487)
Q Consensus       303 ~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t  382 (487)
                      ...+.+..                                       |   -.|+.++|++|+++++|..-.- -.-|.+
T Consensus       290 i~~~~l~~---------------------------------------~---g~iilv~~l~ea~~~~N~~APE-HLei~~  326 (425)
T COG0141         290 IARKALEN---------------------------------------Y---GAIILVDDLDEAVEISNEYAPE-HLELQT  326 (425)
T ss_pred             HHHHHHHh---------------------------------------C---CeEEEECCHHHHHHHHHhhChH-hhhhhh
Confidence            11111110                                       1   1234568999999999995332 356788


Q ss_pred             CCHHHHHHHHHhc-ceeeEEEcCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 011397          383 NNKKLKQQFVETV-SAGGLVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  442 (487)
Q Consensus       383 ~d~~~~~~~~~~~-~~g~v~iN~~~~~~-------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v  442 (487)
                      +|+.   .+..++ ++|.|+++.++.-.       .|+-+|-     +|+-++.+.-++..|+++-++
T Consensus       327 ~~p~---~~l~~I~nAGsIFlG~~sPe~~GDY~aG~NHVLPT-----~g~AR~~s~L~v~dF~K~~tv  386 (425)
T COG0141         327 ENPR---ELLGKIRNAGSIFLGHYSPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRSTV  386 (425)
T ss_pred             cCHH---HHHHHhcccceeeecCCCCccccccccCCCccCCC-----CccchhcCCccHHHhhhHHHH
Confidence            8875   555566 58999999854321       1233333     466777788888888776554

>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine

Probab=96.83  E-value=0.71  Score=47.17  Aligned_cols=280  Identities=19%  Similarity=0.240  Sum_probs=125.5

Q ss_pred             HHHHHHHHHHhhhhcCCccccc--cc-cCCCcceEeeeeceEEEEEcCC---Ccchh-----hhhhhcCCe--EEEeCCC
Q 011397           84 TSIKSALKELKHWMTPEKAKTS--IT-TFPSSAEIVPEPFGVVLIISPW---NYPFF-----VGAIAAGNA--LVLKPSE  150 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~P~GVv~~i~p~---n~P~~-----~~ALaaGN~--Vvlkps~  150 (487)
                      +.|+..+++++.+...+.....  .. ..+.....++.|+--|++..|.   -||-.     +||-.+|..  |+.-|+.
T Consensus        68 ~Ai~~A~~~I~~fh~~q~~~~~~~~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~  147 (412)
T PF00815_consen   68 EAIEQAAENIRAFHEAQLPKKDWEVETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPP  147 (412)
T ss_dssp             HHHHHHHHHHHHHHHTT-----EEEEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCcEEEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCC
Confidence            4455555555555443332111  11 1233667789999999999883   34433     899999984  4455544


Q ss_pred             CCh-HHHHHHHHHHhhhcCCCcEEEEe-CChHhHHHHHh---C-C-CCeEEEecCHHHHHHHHHHHhccccceeeecCCC
Q 011397          151 VAP-ASSSLLAKLVGEYMDLSSIRVVE-GAVAETSALLD---Q-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK  223 (487)
Q Consensus       151 ~~~-~~~~~l~~~l~~alP~g~v~~v~-g~~~~~~~L~~---~-~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~  223 (487)
                      ..- .....|+.+ +.+   |+=.+.. |+.....+|.-   . + ||.|+=.|..-+..+=......-.+   =-..|.
T Consensus       148 ~~G~i~p~vL~Aa-~~~---Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~I---D~~AGP  220 (412)
T PF00815_consen  148 KDGKINPAVLAAA-HLA---GVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGI---DMIAGP  220 (412)
T ss_dssp             ------HHHHHHH-HHT---T-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EE---S-----
T ss_pred             ccCCCCHHHHHHH-HHc---CCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCccc---CCCCCC
Confidence            321 112222221 111   2222222 34444445531   2 3 9999988876543221111111111   112355


Q ss_pred             C--cEEEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHH
Q 011397          224 S--PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHF  301 (487)
Q Consensus       224 ~--p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~  301 (487)
                      +  -+|-|++||.+..+..++.-+= .+..     .+.++|..+  +++.+++.+.+.+....          +...   
T Consensus       221 SEv~ViAD~~A~p~~vAaDLLaQAE-Hd~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~----------l~r~---  279 (412)
T PF00815_consen  221 SEVLVIADETANPEFVAADLLAQAE-HDPD-----AQAVLVTTS--EELAEAVEAEVERQLEE----------LPRR---  279 (412)
T ss_dssp             -EEEEEE-TTS-HHHHHHHHHHHHT-T-TT------EEEEEES---HHHHHHHHHHHHHHHTT-----------TTH---
T ss_pred             CceEEEECCCCCHHHHHHHHHHHhc-cCCC-----CceEEEECC--HHHHHHHHHHHHHHHHh----------CCch---
Confidence            5  3555778999999988887765 3332     234566655  45666665555432111          0111   


Q ss_pred             HHHHHHHHHHHcCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEe
Q 011397          302 ARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF  381 (487)
Q Consensus       302 ~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~  381 (487)
                          +.++.+...                                       -.++.++|++||++++|..-.- -..|.
T Consensus       280 ----~i~~~sl~~---------------------------------------g~ii~~~~l~ea~~~~N~~APE-HLel~  315 (412)
T PF00815_consen  280 ----EIAEKSLEN---------------------------------------GAIIVVDSLEEAIELANEYAPE-HLELQ  315 (412)
T ss_dssp             ----HHHHHHHTT----------------------------------------EEEE-SSHHHHHHHHHHH--S-EEEEE
T ss_pred             ----HHHHHHHHC---------------------------------------CeEEEECCHHHHHHHHHHhhHH-HHHHH
Confidence                112221110                                       1135568999999999995333 46788


Q ss_pred             cCCHHHHHHHHHhc-ceeeEEEcCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          382 TNNKKLKQQFVETV-SAGGLVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       382 t~d~~~~~~~~~~~-~~g~v~iN~~~~~~-------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++|..   .+..++ ++|.|++..++.-.       .++.+|-+     |..++.+.-+...|++.-++.
T Consensus       316 ~~~~~---~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~  377 (412)
T PF00815_consen  316 VEDPE---ELLEKIRNAGAIFLGEYTPEALGDYAAGPNHVLPTG-----GTARFSSGLSVDDFLKRISVQ  377 (412)
T ss_dssp             STTHH---HHGGG--S-SEEEESTT--HHHHHHTSSS------T-----TGGGT---S-GGGGEEEEEEE
T ss_pred             HcCHH---HHHHHhhccChhhcCCCCCHHHhhhccCCCccCCCC-----ccccccCCCcHHHccceeeEE
Confidence            88874   566666 58999999754211       34555654     567788888889997765543

In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.

>PRK13770 histidinol dehydrogenase; Provisional

Probab=96.34  E-value=1.5  Score=44.81  Aligned_cols=253  Identities=19%  Similarity=0.258  Sum_probs=136.0

Q ss_pred             CcceEeeeeceEEEEEcCC-C--cchh-----hhhhhcCCeE--EEeCCCCChHHHHHHHHHHhhhcCCCcEEEEe-CCh
Q 011397          111 SSAEIVPEPFGVVLIISPW-N--YPFF-----VGAIAAGNAL--VLKPSEVAPASSSLLAKLVGEYMDLSSIRVVE-GAV  179 (487)
Q Consensus       111 ~~~~~~~~P~GVv~~i~p~-n--~P~~-----~~ALaaGN~V--vlkps~~~~~~~~~l~~~l~~alP~g~v~~v~-g~~  179 (487)
                      .....++.|+--|++..|. .  ||-.     +||-.+|+.=  +.-|++........|+-+ +.   .|+=.+.. |+.
T Consensus       102 v~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~Aa-~~---~Gv~eIy~iGGA  177 (416)
T PRK13770        102 VECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLAAC-YI---TQVNQVFQVGGA  177 (416)
T ss_pred             cEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHHHH-HH---cCCCeeeccCCH
Confidence            3556788999999999885 3  4443     8999999854  445554311222222221 11   12111221 355


Q ss_pred             HhHHHHH---hC-C-CCeEEEecCHHHHHHHHHHHhccccceeee-cCCCC--cEEEcCCCCHHHHHHHHHHHhcccCCC
Q 011397          180 AETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKS--PVVFDSGINLKVACRRMIMGKWGCNNG  251 (487)
Q Consensus       180 ~~~~~L~---~~-~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e-~gG~~--p~iV~~daDl~~aa~~i~~~~~~~~~G  251 (487)
                      ....+|.   .. + ||.|+=.|..-+..+  +.... + .|-.. ..|.+  .+|-|++||.+..+..++.-+= . ..
T Consensus       178 QAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~-g-~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAE-H-d~  251 (416)
T PRK13770        178 QSIAALTYGTETIPKVDKIVGPGNQFVAYA--KKYLF-G-QVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAE-H-DE  251 (416)
T ss_pred             HHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhc-C-CcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhc-c-CC
Confidence            5555554   22 3 999987776543221  11000 0 11111 13444  3555667999999988887654 2 22


Q ss_pred             CccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceee
Q 011397          252 QACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIA  331 (487)
Q Consensus       252 q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~  331 (487)
                          ..+.++|..+  +++.+++.+.+.+..-.          +.   ..+...+-+++                     
T Consensus       252 ----~a~~iLvT~s--~~la~~V~~ev~~ql~~----------lp---r~~i~~~al~~---------------------  291 (416)
T PRK13770        252 ----LARTYVISED--AQVLKDLESRIAKALPN----------VD---RYDIVSKSIAN---------------------  291 (416)
T ss_pred             ----CCcEEEEeCC--HHHHHHHHHHHHHHHHh----------CC---hHHHHHHHHHh---------------------
Confidence                1345566544  34444444433321100          00   01111111110                     


Q ss_pred             cEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeeEEEcCCcccc-
Q 011397          332 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVHL-  409 (487)
Q Consensus       332 Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~-~~g~v~iN~~~~~~-  409 (487)
                                        +   -.++-++|++||++++|..-.- -.-|.++|..   .+..++ ++|.|++..++.-. 
T Consensus       292 ------------------~---g~ii~v~~~eeai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFlG~~sp~a~  346 (416)
T PRK13770        292 ------------------Q---HYLIHASNFDEACHVMNTIAPE-HASIQTVNPQ---PYIEKVKYVGALFIGHYSPEVI  346 (416)
T ss_pred             ------------------C---CEEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhCCEeceeccCCCCchhh
Confidence                              1   1124568999999999995333 2347888874   566666 57999998754311 


Q ss_pred             ------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          410 ------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       410 ------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                            .++.+|-|     |..++.+.-+...|.+.-++.
T Consensus       347 GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~  381 (416)
T PRK13770        347 GDYVAGPSHVLPTN-----RTARFTNGLSVNDFLTRNTVI  381 (416)
T ss_pred             hccccCCCCcCCCC-----cceeccCCCcHHHeecceeeE
Confidence                  23344443     567777778889998766543

>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed

Probab=96.32  E-value=1.5  Score=44.89  Aligned_cols=325  Identities=18%  Similarity=0.220  Sum_probs=168.0

Q ss_pred             HHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCC----cchhhHHHHHHH--------HHHHHHHHHHHhhhhcCCccccc
Q 011397           38 YGWRVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKTS  105 (487)
Q Consensus        38 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~~a~~~ev~~~--------~~~l~~~~~~~~~~~~~~~~~~~  105 (487)
                      ..+-.+..+.+.+.++.+.|+=....++..-+.    +.-+. .|++.+        .+.|+..+++++.+...+.....
T Consensus        26 ~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~Vs~-~ei~~A~~~v~~~~~~ai~~A~~~I~~Fh~~q~~~~~  104 (425)
T PRK00877         26 DEDVEAAVREILEDVRERGDAALLEYTEKFDGVELESLRVSE-EEIEAAYERLDPELREALEEAAENIRAFHEAQKPESW  104 (425)
T ss_pred             hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCH-HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence            344455666666666666665444344433221    11111 333322        23444555555554433322111


Q ss_pred             c--ccCCCcceEeeeeceEEEEEcCC---Ccchh-----hhhhhcCCe--EEEeCCCCChHHHHHHHHHHhhhcCCCcEE
Q 011397          106 I--TTFPSSAEIVPEPFGVVLIISPW---NYPFF-----VGAIAAGNA--LVLKPSEVAPASSSLLAKLVGEYMDLSSIR  173 (487)
Q Consensus       106 ~--~~~~~~~~~~~~P~GVv~~i~p~---n~P~~-----~~ALaaGN~--Vvlkps~~~~~~~~~l~~~l~~alP~g~v~  173 (487)
                      .  ...+.....++.|+--|++..|.   -||-.     +||-.+|..  |++-|..........|+.+ +.   .|+=.
T Consensus       105 ~~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL~AA-~~---~Gv~e  180 (425)
T PRK00877        105 DVETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPPPDGEINPAILAAA-AL---AGVDE  180 (425)
T ss_pred             EEEecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHHHH-HH---cCCCe
Confidence            1  11233556788999999999886   35544     899999984  4455554222222223221 11   12111


Q ss_pred             EEe-CChHhHHHHH---hC-C-CCeEEEecCHHHHHHHHHHHhccccceee-ecCCCCc--EEEcCCCCHHHHHHHHHHH
Q 011397          174 VVE-GAVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLL-ELGGKSP--VVFDSGINLKVACRRMIMG  244 (487)
Q Consensus       174 ~v~-g~~~~~~~L~---~~-~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~-e~gG~~p--~iV~~daDl~~aa~~i~~~  244 (487)
                      +.. |+.....+|.   +. + ||.|+=.|..=+..+= +....   .|-. -..|.+=  +|-|++||.+..+..++.-
T Consensus       181 Iy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK-~~v~g---~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQ  256 (425)
T PRK00877        181 VYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAK-RLVFG---VVGIDMIAGPSEILVIADETADPDFVAADLLSQ  256 (425)
T ss_pred             eeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHH-HHHcC---CcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHH
Confidence            222 3555555554   22 3 9999888865432210 11111   1111 1235553  4445668999999888876


Q ss_pred             hcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccC
Q 011397          245 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD  324 (487)
Q Consensus       245 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~  324 (487)
                      += .+.     ..+.++|..+  +++.+++.+.+.+....          +.   ..    +.+..+...          
T Consensus       257 AE-Hd~-----~a~aiLvT~s--~~la~~V~~~v~~ql~~----------l~---r~----~ia~~sl~~----------  301 (425)
T PRK00877        257 AE-HDP-----DAQSILVTTS--EELAEAVAAEVERQLAT----------LP---RA----EIARASLEG----------  301 (425)
T ss_pred             hc-cCC-----CCcEEEEECC--HHHHHHHHHHHHHHHHh----------CC---hH----HHHHHHHHh----------
Confidence            54 322     2445666555  34555554444322100          00   01    111211100          


Q ss_pred             CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeeEEEc
Q 011397          325 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVIN  403 (487)
Q Consensus       325 ~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~-~~g~v~iN  403 (487)
                                               +|   .++.++|++||++++|..-.- -.-|.++|..   .+..++ ++|.|++.
T Consensus       302 -------------------------~g---~iivv~~leeai~~~N~~APE-HLel~~~~p~---~~l~~I~nAGaiFlG  349 (425)
T PRK00877        302 -------------------------QG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDPR---ALLDRIRNAGAIFLG  349 (425)
T ss_pred             -------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceeccC
Confidence                                     11   124568999999999995333 2458888874   555555 68999998


Q ss_pred             CCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          404 DTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       404 ~~~~~~-------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      .++.-.       .++.+|-     +|..++.+.-+...|.++-++.
T Consensus       350 ~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~F~K~~s~~  391 (425)
T PRK00877        350 PYTPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRSSVI  391 (425)
T ss_pred             CCCchhhhhcccCCCcccCC-----CcceeecCCccHHHhccceeEE
Confidence            754311       2333444     4667888888999998766544

>PRK12447 histidinol dehydrogenase; Reviewed

Probab=96.20  E-value=1.8  Score=44.40  Aligned_cols=253  Identities=17%  Similarity=0.203  Sum_probs=137.8

Q ss_pred             CcceEeeeeceEEEEEcCC-C--cchh-----hhhhhcCCe--EEEeCCCCChHHHHHHHHHHhhhcCCCcEEEEe-CCh
Q 011397          111 SSAEIVPEPFGVVLIISPW-N--YPFF-----VGAIAAGNA--LVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVE-GAV  179 (487)
Q Consensus       111 ~~~~~~~~P~GVv~~i~p~-n--~P~~-----~~ALaaGN~--Vvlkps~~~~~~~~~l~~~l~~alP~g~v~~v~-g~~  179 (487)
                      .....++.|+--|++..|. .  ||-.     +||-.+|..  |++-|++........|+.+ +.   .|+=.+.. |+.
T Consensus       107 v~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~Aa-~~---~Gv~eIy~vGGA  182 (426)
T PRK12447        107 VILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVAAM-HL---AGADEIYVLGGV  182 (426)
T ss_pred             eEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHHHH-HH---cCCCeehhcCCH
Confidence            3566789999999999884 3  4433     899999984  3455553321222223321 11   12112222 355


Q ss_pred             HhHHHHH---hC-C-CCeEEEecCHHHHHHHHHHHhccccceeee-cCCCCc--EEEcCCCCHHHHHHHHHHHhcccCCC
Q 011397          180 AETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP--VVFDSGINLKVACRRMIMGKWGCNNG  251 (487)
Q Consensus       180 ~~~~~L~---~~-~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e-~gG~~p--~iV~~daDl~~aa~~i~~~~~~~~~G  251 (487)
                      ....+|.   .. + ||.|+=.|..-+..+=.. ...   .|-.. ..|.+=  +|-|++||.+..+..++.-+= .+. 
T Consensus       183 QAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~-v~g---~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAE-Hd~-  256 (426)
T PRK12447        183 QAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQ-LFG---RVGIDLFAGPTETLVIADDTADPELVATDLLGQAE-HGP-  256 (426)
T ss_pred             HHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHH-hcC---ccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhc-cCC-
Confidence            5555554   22 3 999988886543321111 110   11111 135553  455666999999988887654 322 


Q ss_pred             CccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceee
Q 011397          252 QACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIA  331 (487)
Q Consensus       252 q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~  331 (487)
                         . .+.++|..+  +++.+++.+.+.+..-.          +.   ..    +.++.+...                 
T Consensus       257 ---~-a~~iLvT~s--~~la~~V~~~v~~ql~~----------l~---r~----~i~~~sl~~-----------------  296 (426)
T PRK12447        257 ---N-SPAVLITTS--RKLAEEVLAEIERLLAI----------LP---TA----DVASAAWRD-----------------  296 (426)
T ss_pred             ---C-CceEEEECC--HHHHHHHHHHHHHHHHh----------CC---HH----HHHHHHHHh-----------------
Confidence               1 344566554  34555554444332100          00   11    112211100                 


Q ss_pred             cEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeeEEEcCCcccc-
Q 011397          332 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVHL-  409 (487)
Q Consensus       332 Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~-~~g~v~iN~~~~~~-  409 (487)
                                        +|   .++-++|++||++++|..-.- -.-|.++|..   .+..++ ++|.|++..++.-. 
T Consensus       297 ------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFlG~~sp~a~  351 (426)
T PRK12447        297 ------------------YG---EVILCDDLEEMVAEADRYASE-HVQVMTEDPD---WFLENMTNYGALFLGERTNVAY  351 (426)
T ss_pred             ------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceeccCCCCchhh
Confidence                              11   124568999999999995333 2458888874   566666 58999997644211 


Q ss_pred             ------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          410 ------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       410 ------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                            .++.+|-     +|..++.+.-+.+.|.+.-++.
T Consensus       352 GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~~  386 (426)
T PRK12447        352 GDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTYQ  386 (426)
T ss_pred             hhcccCCCcccCC-----CcceeecCCCcHHHhccceeEE
Confidence                  2334444     4667888888899997765543

>PLN02926 histidinol dehydrogenase

Probab=95.93  E-value=2.4  Score=43.55  Aligned_cols=253  Identities=18%  Similarity=0.224  Sum_probs=138.4

Q ss_pred             CcceEeeeeceEEEEEcCCC---cchh-----hhhhhcCCe--EEEeCCCCC-hHHHHHHHHHHhhhcCCCcEEEEe-CC
Q 011397          111 SSAEIVPEPFGVVLIISPWN---YPFF-----VGAIAAGNA--LVLKPSEVA-PASSSLLAKLVGEYMDLSSIRVVE-GA  178 (487)
Q Consensus       111 ~~~~~~~~P~GVv~~i~p~n---~P~~-----~~ALaaGN~--Vvlkps~~~-~~~~~~l~~~l~~alP~g~v~~v~-g~  178 (487)
                      .....++.|+.-|++..|.-   ||-.     +||-.+|..  |++-|+... ......|+.+ +.+   |+=.+.. |+
T Consensus       112 v~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA-~~~---Gv~eIy~vGG  187 (431)
T PLN02926        112 VRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLYCA-KKA---GVTHILKAGG  187 (431)
T ss_pred             eEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHHHH-HHc---CCCeeeccCC
Confidence            35667899999999999963   5544     899999984  445555321 1222223321 111   2112222 35


Q ss_pred             hHhHHHHH---hC-C-CCeEEEecCHHHHHHHHHHHhccccc--eeee-cCCCCc--EEEcCCCCHHHHHHHHHHHhccc
Q 011397          179 VAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTP--VLLE-LGGKSP--VVFDSGINLKVACRRMIMGKWGC  248 (487)
Q Consensus       179 ~~~~~~L~---~~-~-v~~v~ftGs~~~g~~v~~~a~~~~~p--~~~e-~gG~~p--~iV~~daDl~~aa~~i~~~~~~~  248 (487)
                      .....+|.   +. + ||.|+=.|..-+..+=.. ..  +.+  |-.. ..|.+=  +|-|++||.+.++..++.-+= .
T Consensus       188 aQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~-v~--G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQAE-H  263 (431)
T PLN02926        188 AQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMI-LQ--NSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQAE-H  263 (431)
T ss_pred             HHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHH-hh--CCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHhc-c
Confidence            55555554   22 3 999988886543221110 11  110  1111 235553  444566899999988887654 3


Q ss_pred             CCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCc
Q 011397          249 NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKL  328 (487)
Q Consensus       249 ~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~  328 (487)
                      ..     ..+.++|..+  +++.+++.+.+.+..-.          +.   .    .+..+.+.                
T Consensus       264 dp-----~a~aiLvT~s--~~la~~V~~~v~~ql~~----------l~---r----~~i~~~sl----------------  303 (431)
T PLN02926        264 GP-----DSQVVLVAVG--DVDLDAIEEEVEKQCQS----------LP---R----GEIASKAL----------------  303 (431)
T ss_pred             CC-----CCcEEEEECC--HHHHHHHHHHHHHHHHh----------CC---h----HHHHHHHH----------------
Confidence            22     2445666555  35555555444322100          00   0    11111111                


Q ss_pred             eeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeeEEEcCCcc
Q 011397          329 RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAV  407 (487)
Q Consensus       329 ~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~-~~g~v~iN~~~~  407 (487)
                                            .. -.++.++|++||++++|..-.- -.-|.++|..   .+..++ ++|.|++..++.
T Consensus       304 ----------------------~~-g~iivv~~l~ea~~~~N~~APE-HLei~~~~~~---~~l~~i~nAGaiFlG~~sp  356 (431)
T PLN02926        304 ----------------------GH-SFIVVARDMAEAISFSNLYAPE-HLIVNVEDAE---SWLDKIDNAGSVFLGRWTP  356 (431)
T ss_pred             ----------------------HC-CEEEEECCHHHHHHHHHhhChH-hheehhcCHH---HHHhhcCccceeccCCCCc
Confidence                                  01 1235678999999999995332 2358888874   555566 589999976442


Q ss_pred             cc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          408 HL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       408 ~~-------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      -.       .++.+|-|     |..++.|.-+...|.+.-++.
T Consensus       357 ~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~  394 (431)
T PLN02926        357 ESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ  394 (431)
T ss_pred             hhhhccccCcCcccCCC-----cceeecCCCcHHHhcceeeEE
Confidence            11       23344443     567888888899998765543

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=93.06  E-value=0.33  Score=56.96  Aligned_cols=100  Identities=16%  Similarity=0.202  Sum_probs=69.3

Q ss_pred             cCCCcceEeeeeceEEEEEcCCCcchh---hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcEEEEeCChHhHHH
Q 011397          108 TFPSSAEIVPEPFGVVLIISPWNYPFF---VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSA  184 (487)
Q Consensus       108 ~~~~~~~~~~~P~GVv~~i~p~n~P~~---~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v~~v~g~~~~~~~  184 (487)
                      ..++.+.....|.|+|+++++..--+.   ..+|++||.+|+..++.   ....+     ..+|+.+.+.+.-  .....
T Consensus      1176 PTGE~N~l~l~pRg~vLcl~~~~~~~~~Ql~Aala~Gn~~v~~~~~~---~~~~~-----~~Lp~~v~~~v~~--~~~~~ 1245 (1318)
T PRK11809       1176 PTGERNTYTLLPRERVLCLADTEQDALTQLAAVLAVGSQALWPDDAL---HRALV-----AALPAAVQARIQL--AKDWQ 1245 (1318)
T ss_pred             CCCCcceeeccCCCcEEEeCCCHHHHHHHHHHHHHhCCEEEEeCCch---hHHHH-----HhccHHHHhHhhh--ccccc
Confidence            345688999999999999988444333   88999999988864442   22222     3488877666521  11122


Q ss_pred             HHhCCCCeEEEecCHHHHHHHHHHHhcccccee
Q 011397          185 LLDQKWDKICYTGNSRVARIVMAAAAKHLTPVL  217 (487)
Q Consensus       185 L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~  217 (487)
                      +...+++.|.|-|..+..+.+.+..+++..|++
T Consensus      1246 ~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809       1246 LADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred             cccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence            223458999999999999999988887755444

>PRK13769 histidinol dehydrogenase; Provisional

Probab=89.18  E-value=27  Score=35.31  Aligned_cols=237  Identities=20%  Similarity=0.247  Sum_probs=130.1

Q ss_pred             CcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEE--EeCCCCChHHHHHHHHHHhhhcCCCcEEEEe-CChHhH
Q 011397          111 SSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALV--LKPSEVAPASSSLLAKLVGEYMDLSSIRVVE-GAVAET  182 (487)
Q Consensus       111 ~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vv--lkps~~~~~~~~~l~~~l~~alP~g~v~~v~-g~~~~~  182 (487)
                      .....++.|+-.|++..|.-||-.     +||-.+|..=|  .-|+. . .....|+.+ +.   .|+=.+.. |+....
T Consensus        85 v~~g~~~~Pi~rvG~YVPa~~pStvLM~~iPAkvAGV~~Iv~~TPp~-~-i~p~vL~aa-~~---~Gv~eIy~vGGAQAI  158 (368)
T PRK13769         85 VLRSVFWKPVRRAALYVPARYVSTLVMLAVPARAAGVEEIYVVTPPR-G-VTGELLAVA-KE---LGVKGVLAIGGPHGL  158 (368)
T ss_pred             eEEEEEEeeeeeeEEEeccchHHHHHHhhccHhhcCCCeEEEeCCCC-C-CCHHHHHHH-HH---cCCCeeecccCHHHH
Confidence            456778999999999999666654     89999998443  44442 1 222222221 11   12112222 344444


Q ss_pred             HHHHhC-CCCeEEEecCHHHHHHHHHHHhccccceeee-cCCCC-cEEEcCCCCHHHHHHHHHHHhcccCCCCccccCCE
Q 011397          183 SALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKS-PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH  259 (487)
Q Consensus       183 ~~L~~~-~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e-~gG~~-p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~  259 (487)
                      .++.-- +||.|+=.|..-+..+=....+    .|-.. ..|.+ -+||-++||.+..+..++.-+= . ..    ..+.
T Consensus       159 Aa~a~gt~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAE-H-~~----~a~~  228 (368)
T PRK13769        159 AYAVFHMGVDMVAGPGGLYVQAAKYVLSQ----YVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLE-H-GP----TSFA  228 (368)
T ss_pred             HHHhcCCCcCEEECCCcHHHHHHHHHHhC----CcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhh-c-CC----CCcE
Confidence            444433 6999988886543321111111    11111 13444 3444455898888888777654 2 21    2455


Q ss_pred             EEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceeecEEEecCC
Q 011397          260 IITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVP  339 (487)
Q Consensus       260 v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~  339 (487)
                      ++|..+  +++.+++.+.+.+.                          +..    .   .|                   
T Consensus       229 iLvT~s--~~la~~V~~~v~~~--------------------------~~~----~---~~-------------------  254 (368)
T PRK13769        229 YLLSTD--AELLKAAEEIYRRE--------------------------RTS----S---MG-------------------  254 (368)
T ss_pred             EEEECC--HHHHHHHHHHHHHH--------------------------HHh----c---CC-------------------
Confidence            666555  45666655544321                          100    0   00                   


Q ss_pred             CCCcccccccccceeeeeeeCCHHHHHHHHhcCCC-CceEEEecCCHHHHHHHHHhc-ceeeEEEcCCcccc------CC
Q 011397          340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV-SAGGLVINDTAVHL------AV  411 (487)
Q Consensus       340 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~-gl~~~v~t~d~~~~~~~~~~~-~~g~v~iN~~~~~~------~~  411 (487)
                                  - ..++-++|++|+++++|..-. .|...  +.+     .+..++ ++|.|+++.+. ..      .+
T Consensus       255 ------------~-~~iivv~~leeai~~~N~~APEHLel~--~~~-----~~~~~i~nAGsiFl~~p~-a~GDY~aGpN  313 (368)
T PRK13769        255 ------------P-LEVRKVAGVEEAVRFIDEIAPEHLEVW--GRR-----EVAYRVRNVGAVSVNMPS-PYLDYVAGIS  313 (368)
T ss_pred             ------------C-CeEEEECCHHHHHHHHHhhChHheEee--CcH-----HHHhhCCccCChhcCCch-hhhccccCCC
Confidence                        0 245778999999999999533 34443  322     244455 68999996532 11      23


Q ss_pred             CCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          412 HSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       412 ~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      +.+|-|     |..++.|.-+...|++.-++.
T Consensus       314 HvLPT~-----G~AR~~sgLsv~~FlK~~t~~  340 (368)
T PRK13769        314 HVLPTG-----GTARWRGIITPLTFMKPIGVA  340 (368)
T ss_pred             CcCCCC-----cceeccCCCcHHHcccceeEE
Confidence            444443     567777888888987765543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	487
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		1e-107
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		1e-104
3lv1_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		1e-65
3lns_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		2e-64
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		2e-32
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		3e-32
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		1e-31
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		2e-31
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		3e-31
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		3e-31
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		8e-31
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		3e-29
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		7e-29
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		8e-29
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		7e-28
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		7e-28
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		8e-28
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		1e-27
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		2e-27
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		3e-27
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		3e-27
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		3e-27
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		4e-27
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		5e-27
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		1e-26
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		1e-26
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		2e-26
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		2e-26
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		6e-26
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		7e-26
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		7e-26
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		7e-26
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		7e-26
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		1e-25
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		2e-25
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		2e-25
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		4e-25
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		4e-25
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		4e-25
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		5e-25
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		7e-25
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-24
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		1e-24
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		1e-24
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-24
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		2e-24
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		2e-24
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		5e-24
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		6e-24
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		6e-24
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		1e-23
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		3e-23
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		4e-23
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		6e-23
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		9e-23
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		1e-22
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		4e-22
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		4e-22
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		3e-21
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		4e-20
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		4e-20
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		7e-20
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		1e-19
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		2e-19
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		2e-19
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		7e-19
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		8e-19
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		4e-18
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		4e-18
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		5e-18
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		1e-17
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		3e-17
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		4e-15
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		6e-15
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		2e-14
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		1e-13
3ju8_A	490	Crystal Structure Of Succinylglutamic Semialdehyde		3e-13
2jg7_A	510	Crystal Structure Of Seabream Antiquitin And Elucid		5e-12
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		2e-10
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		3e-10
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		6e-10
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		1e-09
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-09
3haz_A	1001	Crystal Structure Of Bifunctional Proline Utilizati		2e-08
2j6l_A	500	Structure Of Aminoadipate-Semialdehyde Dehydrogenas		5e-08

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score =  384 bits (986), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/443 (45%), Positives = 275/443 (62%), Gaps = 13/443 (2%)
Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           VK  R  F SGKT+S  +R+ QL++L +M+NE    I  AL  DL K E  S   EVA +
Sbjct: 7   VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 66
Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
              + + +KEL  W   E    +  T      I  EP GVVL+I  WNYPF       VG
Sbjct: 67  LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 126
Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           A+AAGNA++LKPSEV+   + LLA L+ +YMD +   VV+G V ET+ LL +++D I YT
Sbjct: 127 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 186
Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           G++ V +IVMAAAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++
Sbjct: 187 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 245
Query: 257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD+I+                   FYG++  +S+D  RI+N  HF R+  L+D+ KV+  
Sbjct: 246 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 303
Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
             HGG  D++   IAPT+L+DV   S +M EEIFGP++PI+ V  +E++   IN   KPL
Sbjct: 304 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 361
Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A Y+F+NN+K+ ++ +   S+GG+  ND  VH+ V +LPFGGV  SGMGAYHGK SF+ F
Sbjct: 362 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 421
Query: 437 SHKKAVLSRGFIGDVP--VRYPP 457
           SH+++ L +  + +     RYPP
Sbjct: 422 SHRRSCLVKSLLNEEAHKARYPP 444

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/443 (43%), Positives = 275/443 (62%), Gaps = 13/443 (2%)
Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           VK  R  F+SG+T+   +R+ QL++L +++ E+E ++V AL  DL K E  +   EV  +
Sbjct: 24  VKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYV 83
Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
              I+  +++L  W   E  + +  T      I  EP GVVL+I  WNYPF       VG
Sbjct: 84  LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG 143
Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           AIAAGNA+VLKPSE++   +SLLA ++ +Y+D     V+ G V ET+ LL +++D I YT
Sbjct: 144 AIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYT 203
Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           G++ V +I+M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++
Sbjct: 204 GSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVA 262
Query: 257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD+I+                   FYG++  +S+D  RI+++ HF R+  L++  KV+  
Sbjct: 263 PDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVA-- 320
Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
             +GG  D     IAPT+L DV   S +M EEIFGP+LPI+ V  +E++   IN   KPL
Sbjct: 321 --YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPL 378
Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A Y+F++N K+ ++ +   S+GG+  ND  VH+ +HSLPFGGV  SGMG+YHGK SF+ F
Sbjct: 379 ALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETF 438
Query: 437 SHKKAVLSRGFIGD--VPVRYPP 457
           SH+++ L R  + D  + VRYPP
Sbjct: 439 SHRRSCLVRPLMNDEGLKVRYPP 461

>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457

Iteration: 1
 Score =  247 bits (631), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/447 (32%), Positives = 233/447 (52%), Gaps = 17/447 (3%)
Query: 4   EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL 63
           +++ K  N +  A+  SLF  + +  FA+  T   G+R   L+ L + +   +  +  AL
Sbjct: 16  DDDDKHMNYLSPAKIDSLFSAQ-KAYFATRATADVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 64  RQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVV 123
            +DL KP+    + E+  +   I  AL  L  W+ P    +     PS   +V EP+GV 
Sbjct: 75  AEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVT 134
Query: 124 LIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG 177
            II P+NYP        +GAI  GN  ++KPSE  P +S+++ K++ E      + V++G
Sbjct: 135 YIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQG 194
Query: 178 AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
              E S LL   +D I +TG+  V ++VM AAAKHLTPV+LELGGK P++     +L   
Sbjct: 195 GRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQT 254
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIV 296
             +++ GK+  N+GQ CI+PD++     Y                 K  L E     ++V
Sbjct: 255 VNQLMFGKF-INSGQTCIAPDYL-----YVHYSVKDALLERLVERVKTELPEINSTGKLV 308
Query: 297 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI 356
                 RL  LL  +   G+++ G + D +K  ++ T++  V  +  +MSEE+FGP+LP+
Sbjct: 309 TERQVQRLVSLL--EATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPV 366
Query: 357 LTVDKIEDSFDIIN-SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 415
           L  D +  + D +N    KPLA Y+F  +  + +  +  + +G   +N   +H     LP
Sbjct: 367 LEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLP 426
Query: 416 FGGVQESGMGAYHGKFSFDVFSHKKAV 442
           FGG+  SGMG YHG FS+  F+HKK+V
Sbjct: 427 FGGIGASGMGEYHGHFSYLTFTHKKSV 453

>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457

Iteration: 1
 Score =  243 bits (619), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/447 (32%), Positives = 232/447 (51%), Gaps = 17/447 (3%)
Query: 4   EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL 63
           +++ K  N +  A+  SLF  + +  FA+  T   G+R   L+ L + +   +  +  AL
Sbjct: 16  DDDDKHMNYLSPAKIDSLFSAQ-KAYFATRATADVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 64  RQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVV 123
            +DL KP+    + E+  +   I  AL  L  W+ P    +     PS   +V EP+GV 
Sbjct: 75  AEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVT 134
Query: 124 LIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG 177
            II P+NYP        +GAI  GN  ++KPSE  P +S+++ K++ E      + V++G
Sbjct: 135 YIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQG 194
Query: 178 AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
              E S LL   +D I +TG+  V ++VM AAAKHLTPV+LELGGK P++     +L   
Sbjct: 195 GRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQT 254
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIV 296
             +++ GK+  N+GQ  I+PD++     Y                 K  L E     ++V
Sbjct: 255 VNQLMFGKF-INSGQTXIAPDYL-----YVHYSVKDALLERLVERVKTELPEINSTGKLV 308
Query: 297 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI 356
                 RL  LL  +   G+++ G + D +K  ++ T++  V  +  +MSEE+FGP+LP+
Sbjct: 309 TERQVQRLVSLL--EATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPV 366
Query: 357 LTVDKIEDSFDIIN-SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 415
           L  D +  + D +N    KPLA Y+F  +  + +  +  + +G   +N   +H     LP
Sbjct: 367 LEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLP 426
Query: 416 FGGVQESGMGAYHGKFSFDVFSHKKAV 442
           FGG+  SGMG YHG FS+  F+HKK+V
Sbjct: 427 FGGIGASGMGEYHGHFSYLTFTHKKSV 453

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 206/429 (48%), Gaps = 51/429 (11%)
Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
           R + L ++ K + E++ ++   L  D  KP      E+E SI    L    +K    E+ 
Sbjct: 58  RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEV- 116
Query: 95  HWMTPEKAKTSITTFPSSAEIV---PEPFGVVLIISPWNYPFFVGA------IAAGNALV 145
                          PS   ++    EP G+V  I+P+N+P  + A      IA GN +V
Sbjct: 117 --------------IPSDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIV 162
Query: 146 LKPSEVAPASSSLLAKLVGEYMD-----LSSIRVVEGA--VAETSALLDQKWDKICYTGN 198
             PS  AP     LAK++   +      L    ++ GA  V     ++++K + I +TG+
Sbjct: 163 HHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGS 222
Query: 199 SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 258
           S+V  ++   A      + LELGG +P +     +L  A   +I G +    GQ CIS  
Sbjct: 223 SKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVG 279
Query: 259 HIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLD---DDKVS 314
            I+  +  A                 NPL+ K D+  +++  H   + K+++   D+   
Sbjct: 280 MILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDE--G 337
Query: 315 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTK 374
           GK++ GG+RDK      PT+L +V RD+++   E F P++PI+  ++ E+  DI NS   
Sbjct: 338 GKLLLGGKRDK--ALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEY 393
Query: 375 PLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFD 434
            L + +FTN+     +F E +  GG+VIND+++     ++PFGGV++SG+G    K++ +
Sbjct: 394 GLHSAIFTNDINKSLKFAENLEFGGVVINDSSL-FRQDNMPFGGVKKSGLGREGVKYAME 452
Query: 435 VFSHKKAVL 443
             S+ K ++
Sbjct: 453 EMSNIKTII 461

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 209/462 (45%), Gaps = 22/462 (4%)
Query: 12  EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
           E  D   A+      R   A   T S   R   L+++   + E++P++      D  KP 
Sbjct: 45  EDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKP- 103
Query: 72  LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
           L+ + +++  +    +      +     +KA  S+      + ++ EP GVV +I+PWNY
Sbjct: 104 LDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163
Query: 132 PFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSA 184
           P  +        +AAG A +LKPSE+A  +   L ++  E  +    + ++ G   E  A
Sbjct: 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGA 223
Query: 185 LL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMI 242
            L      DK+ +TG+S     +M AAA+ + PV LELGGKSP+V    ++L  A    I
Sbjct: 224 PLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAI 283
Query: 243 MGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHF 301
            G +   NGQ C +   +I  +  A                 +PLE    L  +V+   +
Sbjct: 284 FGCFW-TNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQY 342
Query: 302 ARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPIL 357
            ++ K + + K  G  I+ GG R    K    I PT++ DV  +  I  EE+FGP+L + 
Sbjct: 343 EKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402
Query: 358 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 417
           T    E++ D+ N     L A + +N+ +  ++  +   AG + +N +         P+G
Sbjct: 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCS--QPCFTQAPWG 460
Query: 418 GVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRY--PP 457
           GV+ SG G   G++  D +   K V    +I + P  +  PP
Sbjct: 461 GVKRSGFGRELGEWGLDNYLSVKQVTQ--YISEEPWGWYQPP 500

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 167/343 (48%), Gaps = 18/343 (5%)
Query: 115 IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 167
           ++ EP GVV +I+PWNYP  +       A+AAG A +LKPSE+A  +   L ++  E  +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 168 DLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 225
              ++ ++ G   E    L      DKI +TG+      +M AAA+ + PV LELGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSP 279
Query: 226 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 284
            VVFD   NL +A    + G +  N GQ C +   +I  ++ A                 
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGIFA-NTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 285 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVP 339
           +PLE    L  +V++  + ++ K + + K  G  I+ GGER    K    + PT++ DV 
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
               I  EE+FGP+L + T    E + ++ N     L A + + + K  ++F +    G 
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 400 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           + IN        + LP+GG + SG G   GK+  + F + K V
Sbjct: 459 IWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQV 499

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 169/352 (48%), Gaps = 24/352 (6%)
Query: 118 EPFGVVLIISPWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP GV   I  WNYPF + A      +A GNA+V KPS + P +  +LA++  E  + + 
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVG 213
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
            + VV+G  AET +LL    +  K+ +TG+    + VM  +AK +  V LELGGKSP++ 
Sbjct: 214 LVNVVQGG-AETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLI 272
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
                L+ A R  +M  +    GQ C +   +   ++  P                +PL 
Sbjct: 273 FKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331
Query: 289 SKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE-------RDKNKLRIAPTLLLDVP 339
           ++  +  +++     ++   +   K  G +++ GGE       + KN   ++P +L +  
Sbjct: 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCR 391
Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
            D   + EEIFGP++ +L  D  E+     N+ T  LA+ +FT +     +    + AG 
Sbjct: 392 DDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451
Query: 400 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV 451
             IN  ++      +PFGG + SG G  +G+ + D +S  K V+    +GDV
Sbjct: 452 CYINTYSISPV--EVPFGGYKMSGFGRENGQATVDYYSQLKTVIVE--MGDV 499

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 192/416 (46%), Gaps = 18/416 (4%)
Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
           R + L+++   + E++   V     D  KP  + ++ ++  + +  +    + +     +
Sbjct: 71  RATYLRAIAAKITEKKDHFVKLETIDSGKP-FDEAVLDIDDVASCFEYFAGQAEALDGKQ 129
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPA 154
           KA  ++      + ++ +P GVV +ISPWNYP  +       A+AAG   VLKPSE+A  
Sbjct: 130 KAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASV 189
Query: 155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK 211
           +     ++  E  +    + ++ G   +  A L      DKI +TG+S     VMA+AA+
Sbjct: 190 TCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQ 249
Query: 212 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXX 271
            + PV LELGGKSP+V    +++       I G +   NGQ C +   ++  +  A    
Sbjct: 250 LVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFW-TNGQICSATSRLLVHESIAAEFV 308
Query: 272 XXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KN 326
                        +P E    L  +++   + ++ K +   K  G  I++GG R    K 
Sbjct: 309 DKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKK 368
Query: 327 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 386
              I PT++ D+     I  EE+FGP+L + T    +++  + N     LAA +F+N+ +
Sbjct: 369 GYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLE 428
Query: 387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
             ++  + +  G + +N +         P+GG++ SG G   G++    + + K V
Sbjct: 429 RCERITKALEVGAVWVNCS--QPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQV 482

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 192/432 (44%), Gaps = 32/432 (7%)
Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESS--IYEVALLKTSIKSALKELKHWMT 98
           R   L+++   + ER+P++      D  KP  E++  + +VA          + L     
Sbjct: 91  RAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAEAL----- 145
Query: 99  PEKAKTSITTFPSS---AEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPS 149
            +K + S  + P       +  EP GVV +I+PWNYP  +       A+AAG   VLKPS
Sbjct: 146 -DKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPS 204
Query: 150 EVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVM 206
           E+A  +   LA +  E  +    + +V G   +  A L      DK+ +TG+    + +M
Sbjct: 205 ELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIM 264
Query: 207 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-WGCNNGQACISPDHIITTKD 265
           A+AA  + PV LELGGKSP+V    +++  A    + G  W   NGQ C +   ++    
Sbjct: 265 ASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFW--TNGQICSATSRLLIHTK 322
Query: 266 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 323
            A                 +PLE    L  +V+   + ++ K + + K  G  I+ GG R
Sbjct: 323 IAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 382
Query: 324 D---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 380
               +    I PT++ D+     I  EE+FGP+L +      +++ ++ N     LA  +
Sbjct: 383 PAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAV 442
Query: 381 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 440
            + +++  Q+  E + AG + +N           P+GG + SG G   G+   D +   K
Sbjct: 443 ISGDRERCQRLSEEIDAGCIWVN--CSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVK 500
Query: 441 AVLSRGFIGDVP 452
            V    +I D P
Sbjct: 501 QVTE--YISDEP 510

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score =  131 bits (330), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 166/343 (48%), Gaps = 18/343 (5%)
Query: 115 IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 167
           ++ EP GVV +I+PWNYP  +       A+AAG A +LKPSE+A  +   L ++  E  +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 168 DLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 225
              ++ ++ G   E    L      DKI +TG+      +M AAA+ + PV L LGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSP 279
Query: 226 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 284
            VVFD   NL +A    + G +  N GQ C +   +I  ++ A                 
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGIFA-NTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 285 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVP 339
           +PLE    L  +V++  + ++ K + + K  G  I+ GGER    K    + PT++ DV 
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
               I  EE+FGP+L + T    E + ++ N     L A + + + K  ++F +    G 
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 400 LVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           + IN        + LP+GG + SG G   GK+  + F + K V
Sbjct: 459 IWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQV 499

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 190/418 (45%), Gaps = 22/418 (5%)
Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
           R   L+++   + E++ ++      D  KP LE ++ ++  +    +      +   + +
Sbjct: 74  RARYLRAIAAKIKEKKDELGKLESIDCGKP-LEEALADLDDVVACFEYYAGLAEELDSKQ 132
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGA------IAAGNALVLKPSEVAPA 154
           KA  S+      + I+ EP GVV +I+PWNYPF +        +AAG A +LKPSE+A  
Sbjct: 133 KAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASV 192
Query: 155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAK 211
           +   L ++  E  +    + +V G   E  A L      DKI +TG+S     +M  AA+
Sbjct: 193 TCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQ 252
Query: 212 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPX 269
            + PV LELGGKSP+V    ++L       +    GC   NGQ C +   +I  +  A  
Sbjct: 253 LVKPVSLELGGKSPIVVFEDVDLDKVAEWTVF---GCFFTNGQICSATSRLIVHESIAVE 309
Query: 270 XXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKL 328
                          +PLE    L  IV+   + ++   +   K  G  +  G R    L
Sbjct: 310 FVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHL 369
Query: 329 R----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 384
           +    + PT++ DV     I  EE+FGP+L + T    E++ ++ N     L + + +N+
Sbjct: 370 KKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSND 429
Query: 385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            +  ++  + + AG + IN      +    P+GG++ SG G   G++  + +   K V
Sbjct: 430 LERCERLSKALQAGIVWIN--CAQPSFIQAPWGGIKRSGFGRELGEWGLENYLSVKQV 485

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score =  125 bits (313), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 16/341 (4%)
Query: 115 IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 167
           ++ EP GVV II+PWN+PF +       AI +G  +VLKPSE    +S  LA+L  E  +
Sbjct: 157 VLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216
Query: 168 DLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 225
                 VV G       +L  D   D + +TG+ RV   +   AA+ +  V LELGGK P
Sbjct: 217 PDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGP 276
Query: 226 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 285
            +  +  +L  A   +  G +  N GQ CIS   ++  +                    +
Sbjct: 277 QIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGD 335
Query: 286 PL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--DKNKLRIAPTLLLDVPRD 341
           PL E   +   ++  H  ++   +     SG +++ GGER   +  L  APT+   V  D
Sbjct: 336 PLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPD 395
Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
             I  EEIFGP+L  LT    +++  + N+    L+A +++ N +   Q +  + AG   
Sbjct: 396 XSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW 455
Query: 402 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           IN  +V      LP GG ++SG+G   G++ FD +S  K V
Sbjct: 456 IN--SVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score =  124 bits (312), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 183/424 (43%), Gaps = 36/424 (8%)
Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHW--MT 98
           R++ L+   + +  R   + +AL  D  +  L  ++ E       I S L  +  W  + 
Sbjct: 52  RITTLQQWKQAILSRREQLTEALVNDTGR--LSITVLE-------IDSFLASIDRWCGLA 102
Query: 99  PEKAKTSI--TTFPSSA---EIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLK 147
           PE  +TS   T+ P  A    +VP P  +V +ISPWN+P        + A+ AG A+V+K
Sbjct: 103 PELLQTSAKNTSIPFIALQQSLVPYP--LVGVISPWNFPLTLSXIDTIPALLAGCAVVVK 160
Query: 148 PSEVAPASSSLLAKLVGEYMDLSSIRV-VEGAVAETSALLDQKWDKICYTGNSRVARIVM 206
           PSE+AP   + L   +    +L  + + VEG   ET A L    D +C+TG+    R V 
Sbjct: 161 PSEIAPRFVAPLLXALNTVPELRDVLIFVEGG-GETGANLINYVDFVCFTGSVATGREVA 219
Query: 207 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTK 264
             AA+   P  LELGGK P +     NL++A   ++   WG   N GQ+C+S + I   +
Sbjct: 220 ETAARRFIPAYLELGGKDPAIVLESANLELATSAIL---WGAVVNTGQSCLSIERIYVAE 276
Query: 265 DYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG-- 321
                                PL E   +  I+       ++  + D    G ++H G  
Sbjct: 277 SKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGK 336
Query: 322 -ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 380
            E         PT+  +V     + +EE FGP+ P+     +E++  + N     L+A +
Sbjct: 337 VEELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAV 396
Query: 381 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH-GKFSFDVFSHK 439
           F  ++    +    ++AG + IND A+    H         SG+G    G      F  K
Sbjct: 397 FAGSEDEALKVARQLNAGAISINDAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRK 456
Query: 440 KAVL 443
           +A L
Sbjct: 457 QAFL 460

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score =  122 bits (305), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 16/336 (4%)
Query: 120 FGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 170
            GV   I PWN+PFF+       A+  GN +V+KPSE  P ++   AK+V E      + 
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 171 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 230
           ++ +  G         + K   +  TG+      +MA AAK++T V LELGGK+P +   
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 290
             +L++A + ++  +   N+GQ C   + +   K                    NP E  
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 291 DLSR--IVNSNHFARL-SKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 346
           D++   ++N+    R+  K+    +   ++  GG+  + K     PTLLLDV ++  IM 
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 347 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 406
           EE FGP+LP++  D +ED+  + N     L + ++T N  +  + ++ +  G   IN   
Sbjct: 382 EETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINREN 441
Query: 407 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
              A+      G ++SG+G   GK     +   + V
Sbjct: 442 FE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQVV 475

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score =  121 bits (304), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 16/336 (4%)
Query: 120 FGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 170
            GV   I PWN+PFF+       A+  GN +V+KPSE  P ++   AK+V E      + 
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 171 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 230
           ++ +  G         + K   +  TG+      +MA AAK++T V LELGGK+P +   
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPAIVMD 262
Query: 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 290
             +L++A + ++  +   N+GQ C   + +   K                    NP E  
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 291 DLSR--IVNSNHFARL-SKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 346
           D++   ++N+    R+  K+    +   ++  GG+  + K     PTLLLDV ++  IM 
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 347 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 406
           EE FGP+LP++  D +ED+  + N     L + ++T N  +  + ++ +  G   IN   
Sbjct: 382 EETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINREN 441
Query: 407 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
              A+      G ++SG+G   GK     +   + V
Sbjct: 442 FE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQVV 475

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score =  121 bits (304), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 172/352 (48%), Gaps = 21/352 (5%)
Query: 111 SSAEIVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVG 164
           + ++IV EP GVV  I+PWNYP          A+A G +LV+KPSE+ P ++  + +L+ 
Sbjct: 162 TESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELME 221
Query: 165 EY-MDLSSIRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELG 221
           E      +I ++ GA +E   ++   ++ D + +TG     + +M  AA ++T + LELG
Sbjct: 222 EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELG 281
Query: 222 GKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXX 280
           GK+P ++FD   + ++A  + + G +  + GQ C +   I+                   
Sbjct: 282 GKNPNIIFDDA-DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKK 339
Query: 281 FYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLR----IAPT 333
               N  ++  ++  ++++ H  ++   +D  K  G  I  GG+R D++ L+      PT
Sbjct: 340 IKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPT 399
Query: 334 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 393
           ++ +      I+ EE+FGP++ +   +  +++  + N     LA  +F+ +    Q+   
Sbjct: 400 VITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVAN 459
Query: 394 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR 445
            +  G + IND   H      P+GG ++SG+G   GK   + +   K +L+ 
Sbjct: 460 KLKLGTVWIND--FHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTN 509

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 181/418 (43%), Gaps = 29/418 (6%)
Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKP-ELESSIYEVALLKTSIKSALKELKHWMTP 99
           R + L  ++K    R+ DIV A+  +L  P  L   ++    L   + +A   L ++   
Sbjct: 69  RQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXGLNHFV-AARDALDNYEFE 127
Query: 100 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAP 153
           E+    +        +V E  GV  +I+PWN+P          A AAG+ +VLKPSE  P
Sbjct: 128 ERRGDDL--------VVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179
Query: 154 ASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAA 210
            ++ +LA++  +  +      +V G  A     L +  K     +TG+      +   AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAA 239
Query: 211 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXX 270
           K    V LELGGKSP +    +++K A +    GK   N GQ C +   ++         
Sbjct: 240 KDFKKVSLELGGKSPYIVLDDVDIKEAAK-ATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298
Query: 271 XXXXXXXXXXFYGKNPLES-KDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKL 328
                         NP E    +  I++   F ++   ++     G ++ +GG      L
Sbjct: 299 LAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGL 358
Query: 329 RIA----PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 384
                  PT+ ++V     I  EEIFGP+  ++T + ++++  I N     LA Y+   +
Sbjct: 359 EKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKD 418
Query: 385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           K+   +   ++ AG + IN+         LPFGG ++SG+G   G +  + F   K++
Sbjct: 419 KETLHKVARSIEAGTVEINEAGRK---PDLPFGGYKQSGLGREWGDYGIEEFLEVKSI 473

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 185/448 (41%), Gaps = 31/448 (6%)
Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
           D E     VK  R  F  G      WR        ++LN      ER+   + AL   D 
Sbjct: 55  DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68  DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
            KP + S + ++ +    +   L+    W      KT        +    EP GV   I 
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
           PWN+P  + A      +A GN +V+K +E  P ++  +A L+ E       + +V G   
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
              A +   +  DK+ +TG++ + R++ +AA + +L  V LELGGKSP +  S  ++  A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
             +     +  N GQ C +       +D                   NP +SK +    V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
           +   F ++   ++  K  G   +  GG        I PT+  DV     I  EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
            IL    IE+     N+ T  LAA +FT +        + + AG + +N   V  A    
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           PFGG + SG G   G++    ++  K V
Sbjct: 464 PFGGYKMSGSGQELGEYGLQAYTEVKTV 491

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 185/448 (41%), Gaps = 31/448 (6%)
Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
           D E     VK  R  F  G      WR        ++LN      ER+   + AL   D 
Sbjct: 55  DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68  DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
            KP + S + ++ +    +   L+    W      KT        +    EP GV   I 
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
           PWN+P  + A      +A GN +V+K +E  P ++  +A L+ E       + +V G   
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
              A +   +  DK+ +TG++ + R++ +AA + +L  V LELGGKSP +  S  ++  A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
             +     +  N GQ C +       +D                   NP +SK +    V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
           +   F ++   ++  K  G   +  GG        I PT+  DV     I  EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
            IL    IE+     N+ T  LAA +FT +        + + AG + +N   V  A    
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           PFGG + SG G   G++    ++  K V
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 150/339 (44%), Gaps = 17/339 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP GVV  I  WN P F+       A+ AG  +VLKP+   P +++ LA++  E  +   
Sbjct: 145 EPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEG 204
Query: 171 SIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
            + VV G +    AL  +   D   +TG+S V R V   AA+ L P  LELGGKS  +  
Sbjct: 205 VLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIIL 264
Query: 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLE 288
             ++L  A   M+      N GQ C++   I+  +  Y                G     
Sbjct: 265 EDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDP 323
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK---NKLRIAPTLLLDVPRDSLI 344
           +  +  +++     R+   +      G ++V GG R +   N   I PT+  DV     I
Sbjct: 324 AAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTI 383
Query: 345 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 404
             EEIFGP+L I+  D  ED+  I N     LA  ++T +     +  + +  G   IN 
Sbjct: 384 AQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINW 443
Query: 405 TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
            A        PFGG + SG+G  +G    + F+ +K+VL
Sbjct: 444 YAFD---PGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 155/336 (46%), Gaps = 16/336 (4%)
Query: 120 FGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 170
            GV   I PWN+PFF+       A+  GN +V+KPSE  P ++   AK+V E      + 
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 171 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 230
           ++ +  G         + K   +  TG+      +MA AAK++T V LELGGK+P +   
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 290
             +L++A + ++  +   N+GQ C   + +   K                    NP E  
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 291 DLSR--IVNSNHFARL-SKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 346
           D++   ++N+    R+  K+    +   ++  GG+  + K     PTLLLDV ++  IM 
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 347 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 406
           EE FGP+LP++  D +E++  + N     L + ++T N  +  + ++ +  G   IN   
Sbjct: 382 EETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINREN 441
Query: 407 VHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
              A+      G ++SG+G   GK     +   + V
Sbjct: 442 FE-AMQGF-HAGWRKSGIGGADGKHGLHEYLQTQVV 475

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score =  119 bits (298), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 185/448 (41%), Gaps = 31/448 (6%)
Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
           D E     VK  R  F  G      WR        ++LN      ER+   + AL   D 
Sbjct: 49  DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 104
Query: 68  DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
            KP + S + ++ +    +   L+    W      KT        +    EP GV   I 
Sbjct: 105 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 160
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
           PWN+P  + A      +A GN +V+K +E  P ++  +A L+ E       + +V G   
Sbjct: 161 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 220
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
              A +   +  DK+ +TG++ + R++ +AA + +L  V LELGGKSP +  S  ++  A
Sbjct: 221 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 280
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
             +     +  N GQ C +       +D                   NP +SK +    V
Sbjct: 281 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 339
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
           +   F ++   ++  K  G   +  GG        I PT+  DV     I  EEIFGP++
Sbjct: 340 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 399
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
            IL    IE+     N+ T  LAA +FT +        + + AG + +N   V  A    
Sbjct: 400 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 457
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           PFGG + SG G   G++    ++  K V
Sbjct: 458 PFGGYKMSGSGRELGEYGLQAYTEVKTV 485

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score =  119 bits (297), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 191/431 (44%), Gaps = 39/431 (9%)
Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
           R S L+    ++ + + D+   +  +  KP      E+  S + +       +    ++ 
Sbjct: 72  RSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDII 131
Query: 95  HWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKP 148
           H  TP K + ++        ++ +P GV  +I+PWN+P  +       A+AAG  +V+KP
Sbjct: 132 H--TPAKDRRAL--------VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181
Query: 149 SEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRV 201
           +E  P S+  LA+L        G Y  +   R     V E +   D    KI +TG++  
Sbjct: 182 AEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE-AICTDPLVSKISFTGSTTT 240
Query: 202 ARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 260
            +I++  AA  +  V +ELGG +P +VFDS  N+  A    +  K+  N GQ C+  +  
Sbjct: 241 GKILLHHAANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTCVCSNQF 298
Query: 261 ITTKDY--APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KI 317
           +  +    A               G    E      ++N     ++ K ++D    G  +
Sbjct: 299 LVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATV 358
Query: 318 VHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
           V GG+R +  K    PTLL +V +D L   EE FGPL P++  D  E++  I N+    L
Sbjct: 359 VTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGL 418
Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A Y ++ +     +  E +  G + +N+  +       PFGGV++SG+G    K+  D +
Sbjct: 419 AGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEY 476
Query: 437 SHKKAVLSRGF 447
              K V   G 
Sbjct: 477 LELKYVCYGGL 487

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 184/448 (41%), Gaps = 31/448 (6%)
Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
           D E     VK  R  F  G      WR        ++LN      ER+   + AL   D 
Sbjct: 55  DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68  DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
            KP + S + ++ +    +   L+    W      KT        +    EP GV   I 
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
           PWN+P  + A      +A GN +V+K +E  P ++  +A L+ E       + +V G   
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
              A +   +  DK+ + G++ + R++ +AA + +L  V LELGGKSP +  S  ++  A
Sbjct: 227 TAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
             +     +  N GQ C +       +D                   NP +SK +    V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
           +   F ++   ++  K  G   +  GG        I PT+  DV     I  EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
            IL    IE+     N+ T  LAA +FT +        + + AG + +N   V  A    
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           PFGG + SG G   G++    ++  K V
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 186/448 (41%), Gaps = 31/448 (6%)
Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
           D E     VK  R  F  G      WR        ++LN      ER+   + AL   D 
Sbjct: 55  DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68  DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
            KP + S + ++ +    +   L+    W      KT        +    EP GV   I 
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
           PWN+P  + A      +A GN +V+K +E  P ++  +A L+ E       + +V G   
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
              A +   +  DK+ +TG++ + R++ +AA + +L  V L+LGGKSP +  S  ++  A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
             +     +  N GQ+C +       +D                   NP +SK +    V
Sbjct: 287 VEQAHFALF-FNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
           +   F ++   ++  K  G   +  GG        I PT+  DV     I  EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
            IL    IE+     N+ T  LAA +FT +        + + AG + +N   V  A    
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           PFGG + SG G   G++    ++  K V
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 181/416 (43%), Gaps = 24/416 (5%)
Query: 39  GWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98
           GWR+   K    +L  R  D+V A   DL           +A  K  I  A   ++ W  
Sbjct: 65  GWRMKTAKERAAILR-RWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIE-WFA 122
Query: 99  PEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLK 147
            E  + +  T P+        +V EP GV   I+PWN+P       VG A+AAG  +V+K
Sbjct: 123 EEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVK 182
Query: 148 PSEVAPASS---SLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARI 204
           P+E  P S+   + LA+  G    + S+ + +     T    +    K+ +TG++ V R+
Sbjct: 183 PAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRL 242
Query: 205 VMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IIT 262
           +MA +A  +  + LELGG +P +VFD   +L  A    I  K+  NNGQ C+  +   + 
Sbjct: 243 LMAQSAPTVKKLTLELGGNAPFIVFDDA-DLDAAVEGAIASKY-RNNGQTCVCTNRFFVH 300
Query: 263 TKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 321
            + Y                G+       L  ++N     ++   + D    G  ++ GG
Sbjct: 301 ERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGG 360
Query: 322 ERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 380
           +R         PT+L  V  D  +  EE FGPL P+      E+   + N     LAAYL
Sbjct: 361 KRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYL 420
Query: 381 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           ++ +     +  E +  G + IN   +   V   PFGGV++SG+G     +  D +
Sbjct: 421 YSRDIGRVWRVAEALEYGMVGINTGLISNEVA--PFGGVKQSGLGREGSHYGIDDY 474

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 182/442 (41%), Gaps = 31/442 (7%)
Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
           D E     VK  R  F  G      WR        ++LN      ER+   + AL   D 
Sbjct: 55  DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68  DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
            KP + S + ++ +    +   L+    W      KT        +    EP GV   I 
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
           PWN+P  + A      +A GN +V+K +E  P ++  +A L+ E       + +V G   
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
              A +   +  DK+ +TG++ + R++ +AA + +L  V LELGGKSP +  S  ++  A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
             +     +  N GQ C +       +D                   NP +SK +    V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
           +   F ++   ++  K  G   +  GG        I PT+  DV     I  EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
            IL    IE+     N+ T  LAA +FT +        + + AG + +N   V  A    
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVF 436
           PFGG + SG G   G++    +
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAY 485

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score =  115 bits (288), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 184/448 (41%), Gaps = 31/448 (6%)
Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
           D E     VK  R  F  G      WR        ++LN      ER+   + AL   D 
Sbjct: 55  DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68  DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
            KP + S + ++ +    +   L+    W      KT        +    EP GV   I 
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
           PWN+P  + A      +A GN +V+K +E  P ++  +A L+ E       + +V G   
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
              A +   +  DK+ +TG++ + R++ +AA + +L  V LELGGKSP +  S  ++  A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
             +     +  N GQ   +       +D                   NP +SK +    V
Sbjct: 287 VEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
           +   F ++   ++  K  G   +  GG        I PT+  DV     I  EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
            IL    IE+     N+ T  LAA +FT +        + + AG + +N   V  A    
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           PFGG + SG G   G++    ++  K V
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score =  115 bits (287), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 190/431 (44%), Gaps = 39/431 (9%)
Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
           R S L+    ++ + + D+   +  +  KP      E+  S + +       +    ++ 
Sbjct: 72  RSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDII 131
Query: 95  HWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKP 148
           H  TP K + ++        ++ +P GV  +I+PWN+P  +       A+AAG  +V+KP
Sbjct: 132 H--TPAKDRRAL--------VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181
Query: 149 SEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRV 201
           +E  P S+  LA+L        G Y  +   R     V E +   D    KI +TG++  
Sbjct: 182 AEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE-AICTDPLVSKISFTGSTTT 240
Query: 202 ARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 260
            +I++  AA  +  V +ELGG +P +VFDS  N+  A    +  K+  N GQ  +  +  
Sbjct: 241 GKILLHHAANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTAVCSNQF 298
Query: 261 ITTKDY--APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KI 317
           +  +    A               G    E      ++N     ++ K ++D    G  +
Sbjct: 299 LVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATV 358
Query: 318 VHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
           V GG+R +  K    PTLL +V +D L   EE FGPL P++  D  E++  I N+    L
Sbjct: 359 VTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGL 418
Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A Y ++ +     +  E +  G + +N+  +       PFGGV++SG+G    K+  D +
Sbjct: 419 AGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEY 476
Query: 437 SHKKAVLSRGF 447
              K V   G 
Sbjct: 477 LELKYVCYGGL 487

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score =  115 bits (287), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 20/342 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           EP GVV  I  WNYP  +       A+AAGNA++ KPSEV P ++  LA++  E      
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 172 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVV 227
           +  V+ G+  E    L +    +KI +TG +   + VMA+A+   L  V +ELGGKSP++
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 259
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
                +L  A    +M  +  ++GQ C +   +   +                    +P 
Sbjct: 260 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 318
Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPR 340
            E+ +   +V+  H   +   ++  K    +++ GGER  +        +APT+  D   
Sbjct: 319 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 378
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
           D  I+ EEIFGP++ IL  D  +++    N     LAA + T +     + +  + AG  
Sbjct: 379 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 438
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            IN      A   +P GG ++SG+G  +G  +   ++  K+V
Sbjct: 439 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  115 bits (287), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 184/448 (41%), Gaps = 31/448 (6%)
Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
           D E     VK  R  F  G      WR        ++LN      ER+   + AL   D 
Sbjct: 55  DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68  DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
            KP + S + ++ +    +   L+    W      KT        +    EP GV   I 
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
           PWN+P  + A      +A GN +V+K +E  P ++  +A L+ E       + +V G   
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
              A +   +  DK+ +TG++ + R++ +AA + +L  V LELGGKSP +  S  ++  A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
             +     +  N GQ   +       +D                   NP +SK +    V
Sbjct: 287 VEQAHFALF-FNQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
           +   F ++   ++  K  G   +  GG        I PT+  DV     I  EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
            IL    IE+     N+ T  LAA +FT +        + + AG + +N   V  A    
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           PFGG + SG G   G++    ++  K V
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  115 bits (287), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 20/342 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           EP GVV  I  WNYP  +       A+AAGNA++ KPSEV P ++  LA++  E      
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 172 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVV 227
           +  V+ G+  E    L +    +KI +TG +   + VMA+A+   L  V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
                +L  A    +M  +  ++GQ C +   +   +                    +P 
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPR 340
            E+ +   +V+  H   +   ++  K    +++ GGER  +        +APT+  D   
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
           D  I+ EEIFGP++ IL  D  +++    N     LAA + T +     + +  + AG  
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            IN      A   +P GG ++SG+G  +G  +   ++  K+V
Sbjct: 440 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 187/444 (42%), Gaps = 33/444 (7%)
Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DLDKPELESS 75
           VK  R  F  G      WR        ++LN      ER+   + AL   D  KP + S 
Sbjct: 62  VKAARAAFQLGSP----WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISY 117
Query: 76  IYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFV 135
           + ++ +    +   L+    W      KT        +    EP GV   I PWN+P  +
Sbjct: 118 LVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLM 173
Query: 136 GA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL-- 186
            A      +A GN +V+K +E  P ++  +A L+ E       + V+ G      A +  
Sbjct: 174 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIAS 233
Query: 187 DQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 245
            +  DK+ +TG++ V  ++  AA K +L  V LE+GGKSP +  S  ++  A  +     
Sbjct: 234 HEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFAL 293
Query: 246 WGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFAR 303
           +  N GQ C +       +D YA               G NP +S+ +    V+   F +
Sbjct: 294 F-FNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVG-NPFDSRTEQGPQVDETQFKK 351
Query: 304 LSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 361
           +   +   K  G K++ GG    ++   I PT+  D+     I  EEIFGP++ IL    
Sbjct: 352 VLGYIKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKS 411
Query: 362 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQE 421
           +E+     N+    LAA +FT +        + + AG + +N   V  A    PFGG + 
Sbjct: 412 MEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKL 469
Query: 422 SGMGAYHGKFSFDVFSHKKAVLSR 445
           SG G   G++    ++  K V  R
Sbjct: 470 SGSGRELGEYGLQAYTEVKTVTVR 493

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 157/339 (46%), Gaps = 19/339 (5%)
Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
           P GV + I  WNYP  +       A+ AGNA+V KPSE  P  +  +A+++ E  +    
Sbjct: 150 PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGL 209
Query: 172 IRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
             V++G   +T  LL    D  K+  TG+    R V AAAA HL  V +ELGGKSP++  
Sbjct: 210 FNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF 268
Query: 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE- 288
              +++ A    ++G +  ++GQ C +   +   K                    +PL+ 
Sbjct: 269 DDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDY 327
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKN----KLRIAPTLLLDVPRDSL 343
           +  L  +V+     ++   ++  K  G  ++ GG    N       + PT+  DV  D  
Sbjct: 328 ATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMT 387
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
           I  EEIFGP++ +L  D  ++     N+    LA  +FT +     + V+ + AG L IN
Sbjct: 388 IAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWIN 447
Query: 404 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
               +L    +PFGG ++SG G  +   + + +S  K V
Sbjct: 448 --TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 154/342 (45%), Gaps = 23/342 (6%)
Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
           P GVV+ I+ WN+P  +       A+  GN +VLKP++  P +++ L ++  E  +    
Sbjct: 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGV 207
Query: 172 IRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
           + V+ G  +     L +      I  TG++   + +   +A+++TPV+LELGGK+P+V  
Sbjct: 208 LNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVM 267
Query: 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLES 289
              +L  A    + G++  N GQ C   + +                        +P+++
Sbjct: 268 DDADLDKAAEDALWGRFA-NCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDA 326
Query: 290 -KDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG------ERDKNKLRIAPTLLLDVPRDS 342
              +    N      +  ++ +    G  V  G      E  +      PT+L+DV +D+
Sbjct: 327 DSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDN 386
Query: 343 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 402
           +++ EE FGP+LPI+ V  +E + +  N     L+AY+ T +     Q +  +  G + I
Sbjct: 387 IVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYI 446
Query: 403 ND--TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           N      H   H+    G ++SG G   GKF  + +  KK V
Sbjct: 447 NRGMGEQHQGFHN----GWKQSGFGGEDGKFGLEQYLEKKTV 484

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score =  112 bits (281), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 206/465 (44%), Gaps = 45/465 (9%)
Query: 5   EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVD--- 61
           EE   + E  D E     VK  R  F  G      WR        ++LN +  D+++   
Sbjct: 46  EEKLCEVEEGDKEDVDKAVKAARQAFQIGSP----WRTMDASERGRLLN-KLADLIERDR 100
Query: 62  ---ALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKT-----SITTFPSSA 113
              A  + ++  +L S+ Y +  L   IK+ L+    W    + +T     +  T+  S 
Sbjct: 101 LLLATMEAMNGGKLFSNAY-LMDLGGCIKT-LRYCAGWADKIQGRTIPMDGNFFTYTRS- 157
Query: 114 EIVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY- 166
               EP GV   I PWN+P  +       A++ GN +V+KP+E  P ++  +  L+ E  
Sbjct: 158 ----EPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAG 213
Query: 167 MDLSSIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELG 221
                + +V G    A A  S+ +D   DK+ +TG++ V +++  AA K +L  V LELG
Sbjct: 214 FPPGVVNIVPGYGPTAGAAISSHMDV--DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELG 271
Query: 222 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXF 281
           GKSP +  +  +L  A      G +  + GQ CI+   +   +                +
Sbjct: 272 GKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKY 330
Query: 282 YGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLD 337
              NPL +  +S+   ++   + ++  L++  K  G K+  GG    NK   I PT+  D
Sbjct: 331 VLGNPL-TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSD 389
Query: 338 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
           V  D  I  EEIFGP+  I+    ++D     N+    L+A +FTN+          + +
Sbjct: 390 VTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQS 449
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           G + +N  +V  A    PFGG + SG G   G++ F  ++  K V
Sbjct: 450 GTVWVNCYSVVSA--QCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 20/342 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           EP GVV  I  WNYP  +       A+AAGNA++ KPSEV P ++  LA++  E      
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 172 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVV 227
           +  V+ G+  E    L +    +KI +TG +   + VMA+A+   L  V + LGGKSP++
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLI 259
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
                +L  A    +M  +  ++GQ C +   +   +                    +P 
Sbjct: 260 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 318
Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPR 340
            E+ +   +V+  H   +   ++  K    +++ GGER  +        +APT+  D   
Sbjct: 319 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 378
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
           D  I+ EEIFGP++ IL  D  +++    N     LAA + T +     + +  + AG  
Sbjct: 379 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 438
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            IN      A   +P GG ++SG+G  +G  +   ++  K+V
Sbjct: 439 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 181/442 (40%), Gaps = 31/442 (7%)
Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
           D E     VK  R  F  G      WR        ++LN      ER+   + AL   D 
Sbjct: 55  DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68  DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
            KP + S + ++ +    +   L+    W      KT        +    EP GV   I 
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 180
           PWN+P  + A      +A GN +V+K +E  P ++  +A L+ E       + +V G   
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 181 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 237
              A +   +  DK+ +TG++ + R++ +AA + +L  V LELGGKSP +  S  ++  A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 238 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 296
             +     +  N GQ   +       +D                   NP +SK +    V
Sbjct: 287 VEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 297 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 354
           +   F ++   ++  K  G   +  GG        I PT+  DV     I  EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 355 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSL 414
            IL    IE+     N+ T  LAA +FT +        + + AG + +N   V  A    
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QS 463
Query: 415 PFGGVQESGMGAYHGKFSFDVF 436
           PFGG + SG G   G++    +
Sbjct: 464 PFGGYKMSGSGRELGEYGLQAY 485

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score =  112 bits (280), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 163/374 (43%), Gaps = 36/374 (9%)
Query: 95  HWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFFV------GAIAAGNA 143
            W   E  +    T P+        ++ +P GV   I+PWN+P  +       A+AAG  
Sbjct: 139 EWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCT 198
Query: 144 LVLKPSEVAPASS---SLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGN 198
           ++++P+++ P ++    +LA+  G  +    +++V G   E  A L  +    K+ +TG+
Sbjct: 199 MIVRPADLTPLTALALGVLAEKAG--IPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGS 256
Query: 199 SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 258
           + V R++MA  A  +  + LELGG +P +     +L  A    ++ K+  N GQ C+  +
Sbjct: 257 TEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYR-NAGQTCVCAN 315
Query: 259 HIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-K 316
            I   +  Y                G        +  ++      ++   ++D    G K
Sbjct: 316 RIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAK 375
Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
           ++ GG ++   L   P +L  V  D L+  EE FGPL P+   D  E+     N     L
Sbjct: 376 LITGG-KELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGL 434
Query: 377 AAYLFTNNKKLKQQFVETVSAG------GLVINDTAVHLAVHSLPFGGVQESGMGAYHGK 430
           AAY +T N     +  E +  G      GL+ N+ A        PFGGV++SG+G    K
Sbjct: 435 AAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVA--------PFGGVKQSGLGREGSK 486
Query: 431 FSFDVFSHKKAVLS 444
           +  + +   K + S
Sbjct: 487 YGIEEYLETKYICS 500

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score =  112 bits (279), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 146/328 (44%), Gaps = 18/328 (5%)
Query: 119 PFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
           P GV + ISPWN+         V  I  GN +VLKP+   P  ++   +++ +  +    
Sbjct: 172 PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGV 231
Query: 172 IRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGK 223
           I  V G+ AE    L+D  K   I +TG+  V   +   AA       HL  V++E+GGK
Sbjct: 232 INYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGK 291
Query: 224 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYG 283
             VV D   +L +A   +++  +G + GQ C +    +  KD                  
Sbjct: 292 DTVVVDRDADLDLAAESILVSAFGFS-GQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350
Query: 284 KNPLESKD-LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRD 341
            +P    + +  +++   F ++   ++  K  G+++ GGE D +    I PT++ D+  +
Sbjct: 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPE 410
Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
           ++IM EEIFGP++     +  + + +I N+    L   + T N+   +Q       G L 
Sbjct: 411 AVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLY 470
Query: 402 INDTAVHLAVHSLPFGGVQESGMGAYHG 429
            N       V   PFGG + SG  +  G
Sbjct: 471 FNRNCTGAIVGYHPFGGFKMSGTDSKAG 498

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 20/342 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           EP GVV  I  WNYP  +       A+AAGNA++ KPSEV P ++  LA++  E      
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 172 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVV 227
           +  V+ G+  E    L +    +KI +TG +   + VMA+A+   L  V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
                +L  A    +M  +  ++GQ   +   +   +                    +P 
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPR 340
            E+ +   +V+  H   +   ++  K    +++ GGER  +        +APT+  D   
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
           D  I+ EEIFGP++ IL  D  +++    N     LAA + T +     + +  + AG  
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            IN      A   +P GG ++SG+G  +G  +   ++  K+V
Sbjct: 440 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 186/419 (44%), Gaps = 41/419 (9%)
Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
           R + L++   ++ E + D+   +  +  KP L  +  E++   + I+        W   E
Sbjct: 71  RATILRNWFNLMMEHQDDLARLMTLEQGKP-LAEAKGEISYAASFIE--------WFAEE 121
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKPS 149
             +    T P         ++ +P GV   I+PWN+P  +       A+AAG  +VLKP+
Sbjct: 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181
Query: 150 EVAPASSSLLAKL-VGEYMDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVM 206
              P S+  LA+L +   +      VV G+       L       K+ +TG++ + R +M
Sbjct: 182 SQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241
Query: 207 AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 265
              AK +  V LELGG +P +VFD   +L  A    +  K+  N GQ C+  + +     
Sbjct: 242 EQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQDG 299
Query: 266 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG-- 321
                           +  + L++   +  +++    A++ + + D    G ++V GG  
Sbjct: 300 VYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA 359
Query: 322 -ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPLA 377
            ER  N  +  PT+L+DVP ++ +  EE FGPL P+    + +D  D+I   N     LA
Sbjct: 360 HERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLA 414
Query: 378 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           AY +  +     +  E +  G + IN   +   V   PFGG++ SG+G    K+  + +
Sbjct: 415 AYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 186/419 (44%), Gaps = 41/419 (9%)
Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
           R + L++   ++ E + D+   +  +  KP L  +  E++   + I+        W   E
Sbjct: 71  RATILRNWFNLMMEHQDDLARLMTLEQGKP-LAEAKGEISYAASFIE--------WFAEE 121
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFFV------GAIAAGNALVLKPS 149
             +    T P         ++ +P GV   I+PWN+P  +       A+AAG  +VLKP+
Sbjct: 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181
Query: 150 EVAPASSSLLAKL-VGEYMDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVM 206
              P S+  LA+L +   +      VV G+       L       K+ +TG++ + R +M
Sbjct: 182 SQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241
Query: 207 AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 265
              AK +  V LELGG +P +VFD   +L  A    +  K+  N GQ C+  + +     
Sbjct: 242 EQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQDG 299
Query: 266 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG-- 321
                           +  + L++   +  +++    A++ + + D    G ++V GG  
Sbjct: 300 VYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA 359
Query: 322 -ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPLA 377
            ER  N  +  PT+L+DVP ++ +  EE FGPL P+    + +D  D+I   N     LA
Sbjct: 360 HERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLA 414
Query: 378 AYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           AY +  +     +  E +  G + IN   +   V   PFGG++ SG+G    K+  + +
Sbjct: 415 AYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA--PFGGIKASGLGREGSKYGIEDY 471

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 20/342 (5%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           EP GVV  I  WNYP  +       A+AAGNA++ KPSEV P ++  LA++  E      
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 172 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKH-LTPVLLELGGKSPVV 227
           +  V+ G+  E    L +    +KI +TG +   + VMA+A+   L  V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
                +L  A    +M  +  ++GQ   +   +   +                    +P 
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 288 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKNKL-----RIAPTLLLDVPR 340
            E+ +   +V+  H   +   ++  K    +++ GGER  +        +APT+  D   
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
           D  I+ EEIFGP++ IL  D  +++    N     LAA + T +     + +  + AG  
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            IN      A   +P GG ++SG+G  +G  +   ++  K+V
Sbjct: 440 WINTWGESPA--EMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 26/337 (7%)
Query: 114 EIVPEPFGVVLIISPWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEY- 166
           + V  P GV ++I PWN+ F + A      I  GN +VLKP+  AP  ++   +++ E  
Sbjct: 167 QYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESG 226
Query: 167 MDLSSIRVVEGAVAET-SALLDQ-KWDKICYTGNSRVARIVMAAAAK------HLTPVLL 218
           +    +  V G+ AE    L+D  K   I +TG+  V   +   AAK      HL  V+ 
Sbjct: 227 LPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIA 286
Query: 219 ELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IITTKDYAPXXXXXXXXX 277
           E+GGK  VV D   ++++A + +    +G   GQ C +    ++  K Y           
Sbjct: 287 EMGGKDTVVVDEDCDIELAAQSIFTSAFGFA-GQKCSAGSRAVVHEKVYDEVLKRVIEIT 345
Query: 278 XXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLL 336
                G+       +  +++   F ++   ++  K  G++V GG+ D +K   I PT+  
Sbjct: 346 ESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGYFIEPTIFA 405
Query: 337 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK----KLKQQFV 392
           D+   + +M EEIFGP++    V   +++ ++ N+    L   + T N+    + KQ+F 
Sbjct: 406 DLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEF- 464
Query: 393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG 429
                G L  N       V   PFGG + SG  +  G
Sbjct: 465 ---HVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 150/335 (44%), Gaps = 14/335 (4%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP G+VL ISP+NYP  +       A+ AGN +  KP      S  LLA+   E  +   
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
               + G  +E    +   Q  + I +TG++ +   +   A   + P++LELGGK   + 
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
               +L++  + +I G +G + GQ C +   ++  +  A                 NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 348
             D++ ++++     +  L++D    G       + +  L I P L   V  D  +  EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 349 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 408
            FGP+LPI+ V  +E++ +I N     L A +FTN+        E +  G + IN+    
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 409 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
               + PF G ++SG G    K+S +  +  K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 149/337 (44%), Gaps = 20/337 (5%)
Query: 118 EPFGVVLIISPWNYPFFVGA------IAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           +P GVV  I+PWNYP  + A      +AAGN +VLKPSE+ P ++  LA+L  +      
Sbjct: 158 DPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGV 217
Query: 172 IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-VF 228
           + ++ G        L    K   +  TG+      +++  A  +    +ELGGK+PV VF
Sbjct: 218 VNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVF 277
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPL 287
           D      V       G +  N GQ C +   I   K  Y                G    
Sbjct: 278 DDADIEAVVEGVRTFGYY--NAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDD 335
Query: 288 ESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDK-NKLRIAPTLLLDVPRDSLI 344
           ES +L  + +  H  R+ K +++ K +G  K++ GGE+ K N    APTLL    +D  I
Sbjct: 336 ESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAI 395
Query: 345 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 404
           + +E+FGP++ +   D  E   +  N     LA+ ++T +     +    +  G   +N 
Sbjct: 396 VQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNT 455
Query: 405 TAVHLAVHSLPFGGVQESGMG---AYHGKFSFDVFSH 438
               + V  +P GG + SG G   + +G   + V  H
Sbjct: 456 H--FMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRH 490

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score =  108 bits (271), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 28/346 (8%)
Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS- 171
           P G V II+PWN P  +       A+A GN +VLKP+E +P +++ LA+++ E  DL   
Sbjct: 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKE-ADLPPG 220
Query: 172 -IRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
              +V+G   E  A L        +  TG +   +IVM  AA HL  +  ELGGKSP + 
Sbjct: 221 VFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALV 280
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
            +  +L+ A   ++   +   NG+ C +   ++  +                    +PL+
Sbjct: 281 FADADLERALDAVVFQIFSF-NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLD 339
Query: 289 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---------IAPTLLLD 337
            + ++  +++  H  R+   ++  K  G +++ GGER K   R         + PT+ + 
Sbjct: 340 PETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG 399
Query: 338 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
                 I  EEIFGP+L  +     E++    N     LAAY+FT + +   +    + A
Sbjct: 400 -ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEA 458
Query: 398 GGLVINDTAV-HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           G + +N   V HL     PFGGV+ SG     G ++ D ++  K +
Sbjct: 459 GMVYLNSHNVRHLPT---PFGGVKGSGDRREGGTYALDFYTDLKTI 501

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score =  108 bits (270), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 150/335 (44%), Gaps = 14/335 (4%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP G+VL ISP+NYP  +       A+ AGN +  KP      S  LLA+   E  +   
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
               + G  +E    +   Q  + I ++G++ +   +   A   + P++LELGGK   + 
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
               +L++  + +I G +G + GQ C +   ++  +  A                 NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 348
             D++ ++++     +  L++D    G       + +  L I P L   V  D  +  EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 349 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 408
            FGP+LPI+ V  +E++ +I N     L A +FTN+        E +  G + IN+    
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 409 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
               + PF G ++SG G    K+S +  +  K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 149/335 (44%), Gaps = 14/335 (4%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP G+VL ISP+NYP  +       A+ AGN +  KP      S  LLA+   E  +   
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
               + G  +E    +   Q  + I +TG++ +   +   A   + P++L LGGK   + 
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLALGGKDSAIV 259
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
               +L++  + +I G +G + GQ C +   ++  +  A                 NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGYS-GQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 348
             D++ ++++     +  L++D    G       + +  L I P L   V  D  +  EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 349 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 408
            FGP+LPI+ V  +E++ +I N     L A +FTN+        E +  G + IN+    
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 409 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
               + PF G ++SG G    K+S +  +  K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 149/339 (43%), Gaps = 18/339 (5%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP GV   I PWN+P  +       A+  GN +V+KP+E  P S+  +  L+ E      
Sbjct: 156 EPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPG 215
Query: 171 SIRVVEGAVAETSALLDQKW--DKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 227
            + ++ G      A +      DKI +TG++ V +++  AA + +L  V LELGGKSP +
Sbjct: 216 VVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNI 275
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 286
             +  +L  A  +   G +  N GQ C +   I   +  Y                G   
Sbjct: 276 IFADADLDYAVEQAHQGVF-FNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPF 334
Query: 287 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLI 344
             + +    ++   + ++ +L+      G  +  G +   +    I PT+  +V  D  I
Sbjct: 335 DPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRI 394
Query: 345 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 404
             EEIFGP+  IL    +++  +  N+    L A +FTN+          + AG + IN 
Sbjct: 395 AKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWIN- 453
Query: 405 TAVHLAVHSL-PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
              + A+++  PFGG + SG G   G+F    +S  K V
Sbjct: 454 --CYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTV 490

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 149/335 (44%), Gaps = 14/335 (4%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP G+VL ISP+NYP  +       A+ AGN +  KP      S  LLA+   E  +   
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 171 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
               + G  +E    +   Q  + I +TG++ +   +   A   + P++LELGGK   + 
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
               +L++  + +I G +G + GQ   +   ++  +  A                 NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGYS-GQRSTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 289 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 348
             D++ ++++     +  L++D    G       + +  L I P L   V  D  +  EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 349 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 408
            FGP+LPI+ V  +E++ +I N     L A +FTN+        E +  G + IN+    
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNK-TQ 436
Query: 409 LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
               + PF G ++SG G    K+S +  +  K+V+
Sbjct: 437 RGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 110/453 (24%), Positives = 199/453 (43%), Gaps = 47/453 (10%)
Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           DA+ A   +   +  F + KT S   R+  ++ ++++  +R  D+   +  ++  P   +
Sbjct: 64  DADKA---INAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMA 120
Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF- 133
              + A   + I++ +K  K +   E    ++      A +  +  GVV +I+PWN+P  
Sbjct: 121 LNAQTATGSSHIRNFIKAYKEFSFQE----ALIEGNEQAILHYDAIGVVGLITPWNWPMN 176
Query: 134 -----FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI-RVVEGAVAETSALLD 187
                 + A+ AG  +VLKPSE+AP S+ L A+++ E    S +  ++ G  A   + L 
Sbjct: 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLS 236
Query: 188 QKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGK-SPVVF-DSGIN-LKVACRRMI 242
              D   I +TG++R  + +   A+  L  V LELGGK + ++F D+ I+ L+   R   
Sbjct: 237 AHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCF 296
Query: 243 MGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHF 301
                 N+GQ+C +P  ++  +  Y                G        +  +V+   +
Sbjct: 297 Y-----NSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQY 351
Query: 302 ARLSKLLDDDKVSG-KIVHGG-------ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPL 353
            ++  L+      G  +V GG       ER      + PT+  DV     I  EEIFGP+
Sbjct: 352 DKIQDLIQSGIDEGATLVTGGTGLPMGMERG---YYVRPTVFADVKPHMRIFREEIFGPV 408
Query: 354 LPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS 413
           L +L  +  +++  + N     L  Y+ + ++   ++    V +G + +N        H 
Sbjct: 409 LSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-------HE 461
Query: 414 LP----FGGVQESGMGAYHGKFSFDVFSHKKAV 442
           LP    FGGV+ SG     G +    F   KA+
Sbjct: 462 LPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 152/346 (43%), Gaps = 22/346 (6%)
Query: 119 PFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
           P G  ++I+PWN+P        VG +A GN ++ KP+E A    + + ++  E       
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 172 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 222
           +  + G   E  A L +  +   I +TG+  V   +  AA + L P         +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 281
           K+ ++ D   +  +A   +++  +G   GQ C +   +I T+  Y P             
Sbjct: 292 KNAIIVDETADFDLAAEGVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 282 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPR 340
            G    E+ DL  +V++    ++   ++  K  G++V GG+R +     IAPT+  +VP 
Sbjct: 351 VGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPP 409
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
            + I  EEIFGP+L ++ V    ++ ++ N     L   +++  ++  +        G L
Sbjct: 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 445
             N       V   PFGG + SG  A  G   +  +F   KAV  R
Sbjct: 470 YFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 22/346 (6%)
Query: 119 PFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
           P G  ++I+PWN+P        VG +A GN ++ KP+E A    + + ++  E       
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 172 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 222
           +  + G   E  A L +  +   I +TG+  V   +  AA + L P         +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 281
           K  ++ D   +  +A   +++  +G   GQ C +   +I T+  Y P             
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 282 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPR 340
            G    E+ DL  +V++    ++   ++  K  G++V GG+R +     IAPT+  +VP 
Sbjct: 351 VGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPP 409
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
            + I  EEIFGP+L ++ V    ++ ++ N     L   +++  ++  +        G L
Sbjct: 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 445
             N       V   PFGG + SG  A  G   +  +F   KAV  R
Sbjct: 470 YFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 22/341 (6%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           EP GV  +I PWN P  +       A+  GN +++KP+E  P ++  +A L+ E      
Sbjct: 158 EPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPG 217
Query: 171 SIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP 225
            + +V G    A A  S+ +D   DK+ +TG++ V +++  AAAK +L  V LELG K+P
Sbjct: 218 VVNIVPGYGPTAGAAISSHMDV--DKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNP 275
Query: 226 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 285
            +  +  +L  A      G +  N GQ+CI+   +   +                +   N
Sbjct: 276 CIVFADADLDSAVEFAHQGVF-TNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGN 334
Query: 286 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDS 342
           PL    +    +N     ++ +L++  K  G K+  GG    NK   I PT+  +V  D 
Sbjct: 335 PLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDM 394
Query: 343 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 402
            I  EEIFGP+  I+    +++     N+    L A +FT +          + AG + +
Sbjct: 395 RIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWV 454
Query: 403 NDTAVHLAVHSL-PFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           N    +LA  +  P GG + SG G   G++    ++  K V
Sbjct: 455 N---CYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVKTV 492

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 148/345 (42%), Gaps = 20/345 (5%)
Query: 119 PFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
           P G  ++I+PWN+P        VG +A GN ++ KP+E A    + + ++  E       
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 172 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 222
           +  + G   E  A L +  +   I +TG+  V   +  AA + L P         +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFY 282
           K  ++ D   +  +A   +++  +G    +   +   I+T   Y P              
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSV 351
Query: 283 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRD 341
           G    E+ DL  +V++    ++   ++  K  G++V GG+R +     IAPT+  +VP  
Sbjct: 352 GPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPK 410
Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
           + I  EEIFGP+L ++ V    ++ ++ N     L   +++  ++  +        G L 
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470
Query: 402 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAVLSR 445
            N       V   PFGG + SG  A  G   +  +F   KAV  R
Sbjct: 471 FNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 178/407 (43%), Gaps = 25/407 (6%)
Query: 34  KTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKEL 93
           K +    RV  L +   +L ER+  I + +  ++ KP+ +S+I EV+     I+    E 
Sbjct: 66  KIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPK-KSAIGEVSRTADIIRHTADEA 124
Query: 94  KHWMTPEKAKTSITTFPSSAEIV---PEPFGVVLIISPWNYPFFVGA------IAAGNAL 144
              +  E  K       SS +I     EP GVVL ISP+NYP  + A      +  GN +
Sbjct: 125 LR-LNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTV 183
Query: 145 VLKPSEVAPASSSLLAKLVGEYMDLSS----IRVV--EGAVAETSALLDQKWDKICYTGN 198
           V KP+     S     K+V    D  +    I+VV   G+V     +     D I +TG 
Sbjct: 184 VFKPATQGSLSG---IKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGG 240
Query: 199 SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 258
           +     +   A   + PV+LELGGK P +     +LK+   +++ G +  + GQ C +  
Sbjct: 241 TTTGERISEKA--KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYS-GQRCTAIK 297
Query: 259 HIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIV 318
            +      A                 +P +  D++ +++    A +  L+DD   +G  +
Sbjct: 298 RVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATL 357
Query: 319 HGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAA 378
             G + +  L ++PTLL DV     +  EE FGP+LPI+ V    ++  + N     L A
Sbjct: 358 LSGNKRQGNL-LSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQA 416
Query: 379 YLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 425
            +FT +        + +  G + IN        H  PF GV++SG+G
Sbjct: 417 SIFTKDTDRAINIGKHLEVGTVHINAKTERGPDH-FPFLGVKKSGLG 462

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 173/429 (40%), Gaps = 29/429 (6%)
Query: 30  FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89
           F   K  S   R   L+ + + L     +    + ++  KP ++ +  EV       KSA
Sbjct: 42  FKKWKXTSVAQRAQTLRDIGQALRAHAEEXAQCITREXGKP-IKQARAEV------TKSA 94
Query: 90  LKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFF------VGAI 138
              L  W   E     +   P+  E     I   P GV+L I PWN+P +      V  +
Sbjct: 95  --ALCDWYA-EHGPAXLNPEPTLVENQQAVIEYRPLGVILAIXPWNFPLWQVLRGAVPIL 151
Query: 139 AAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAE--TSALLDQKWDKICYT 196
            AGN+ +LK +      +  +A+++ E    + +     A  E  +  + D +   +  T
Sbjct: 152 LAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYGWVNANNEGVSQXINDPRIAAVTVT 211
Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           G+ R    + A A   L   +LELGG  P +  +  +L++A +  + G++  N GQ C +
Sbjct: 212 GSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ-NTGQVCAA 270
Query: 257 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG 315
               I  +  A                 +PL E  DL      +    L + +      G
Sbjct: 271 AKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDLGPXARFDLRDELHQQVQASVAEG 330
Query: 316 -KIVHGGERDKNKLRI-APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 373
            +++ GGE+   +    A T+L DV  D     +E+FGP+  I        +  + N   
Sbjct: 331 ARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALANDSE 390
Query: 374 KPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF 433
             L+A +FT +  L  +    +  GG+ IN  +   A   + FGGV++SG G     F  
Sbjct: 391 FGLSATIFTADDTLAAEXAARLECGGVFINGYSASDA--RVAFGGVKKSGFGRELSHFGL 448
Query: 434 DVFSHKKAV 442
             F + + V
Sbjct: 449 HEFCNVQTV 457

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 153/345 (44%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
           EP GV  I+ PWNYP  +        +AAGN +V+KP++V P ++   A+L +   +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
            + ++ G+ +     L    D  KI +TG++ V + +M + A  ++  V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
             +  +L  A  +M M     N G+ CI+   +   +                    NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
           E     R  N    NH A L KL++      K    +V GG +  +      PT+  DV 
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
               I  EE FGP++ I       ++      N+    LA+ +FT +        + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           G + IN    +    + PFGG ++SG G   G+ + + +   K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 157/333 (47%), Gaps = 16/333 (4%)
Query: 121 GVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--I 172
           GVV +ISPWN+P  +       A+A GNA+V+KP+   P +  ++   + E   + +  I
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVI 209
Query: 173 RVVEGAVAETS-ALLDQKWDK-ICYTGNSRVARIV--MAAAAKHLTPVLLELGGKSPVVF 228
             V GA +E     +     K I +TG++ V R V  +A     +  V LELGG +P V 
Sbjct: 210 STVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVV 269
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP-L 287
            +  ++  A +   +G +  + GQ C+S + +I                       +P  
Sbjct: 270 LADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSA 328
Query: 288 ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 347
           E   +  ++N +  + L + ++  K  G  V      + +L + P +  DV  D  I  E
Sbjct: 329 EGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRL-VHPHVFSDVTSDMEIARE 387
Query: 348 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 407
           EIFGPL+ +L  D    + ++ N+    L+A +++ +     QF   + +G + IND  V
Sbjct: 388 EIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTV 447
Query: 408 HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 440
           +   H + FGG + SG+G ++G ++ + F+  +
Sbjct: 448 NDEPHVM-FGGSKNSGLGRFNGDWAIEEFTTDR 479

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 153/345 (44%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
           EP GV  I+ PWNYP  +        +AAGN +V+KP++V P ++   A+L +   +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
            + ++ G+ +     L    D  KI +TG++ V + +M + A  ++  V L+LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
             +  +L  A  +M M     N G+ CI+   +   +                    NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
           E     R  N    NH A L KL++      K    +V GG +  +      PT+  DV 
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
               I  EE FGP++ I       ++      N+    LA+ +FT +        + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           G + IN    +    + PFGG ++SG G   G+ + + +   K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 150/339 (44%), Gaps = 29/339 (8%)
Query: 110 PSSAEIVP--------EPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPAS 155
           P++ E +P        +P G+V  I+PWNYP          AI  GN +V KPSE  P +
Sbjct: 144 PAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLT 203
Query: 156 SSLLAKLVGEYMDLSSIRVVEGAVAET--SALLDQ-KWDKICYTGNSRVARIVMAAAAKH 212
           +  LA+L+ + +    + V+ G   ET  +AL++  K   +  TG+    + V+AAAAK 
Sbjct: 204 ALKLARLIADILPEGVVNVITGR-GETVGNALINHPKVGXVSITGDIATGKKVLAAAAKT 262
Query: 213 LTPVLLELGGKSPVVFDSGINLKVACRRM-IMGKWGCNNGQACISPDHIITTKD-YAPXX 270
           +    LELGGK+PV+     +L+     +   G +  N GQ C +   I      Y    
Sbjct: 263 VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYY--NAGQDCTAACRIYAEAGIYEKLV 320
Query: 271 XXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDD--DKVSGKIVHGGERDKNK- 327
                      Y  +     ++  +++     R++  ++   D+   +I  GG    ++ 
Sbjct: 321 ADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEG 380
Query: 328 LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 387
               PT++    ++  I+  E+FGP++ +      +D+    N     LA+ ++T +   
Sbjct: 381 FFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISK 440
Query: 388 KQQFVETVSAGGLVINDTAVHLAV-HSLPFGGVQESGMG 425
             +    +  G   IN    H  + +  P GG+++SG G
Sbjct: 441 AXRAASRLQYGCTWIN---THFXLTNEXPHGGIKQSGYG 476

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 152/345 (44%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
           EP GV  I+ PWNYP  +        +AAGN +V+KP++V P ++   A+L +   +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
            + ++ G+ +     L    D  KI +TG++ V + +M + A  ++  V L LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
             +  +L  A  +M M     N G+ CI+   +   +                    NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
           E     R  N    NH A L KL++      K    +V GG +  +      PT+  DV 
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
               I  EE FGP++ I       ++      N+    LA+ +FT +        + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           G + IN    +    + PFGG ++SG G   G+ + + +   K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 152/345 (44%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
           EP GV  I+ PWNYP  +        +AAGN +V+KP++V P ++   A+L +   +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
            + ++ G+ +     L    D  KI +TG++ V + +M + A  ++  V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
             +  +L  A  +M M     N G+  I+   +   +                    NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
           E     R  N    NH A L KL++      K    +V GG +  +      PT+  DV 
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
               I  EE FGP++ I       ++      N+    LA+ +FT +        + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           G + IN    +    + PFGG ++SG G   G+ + + +   K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 152/345 (44%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
           EP GV  I+ PWNYP  +        +AAGN +V+KP++V P ++   A+L +   +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
            + ++ G+ +     L    D  KI +TG++ V + +M + A  ++  V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
             +  +L  A  +M M     N G+  I+   +   +                    NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
           E     R  N    NH A L KL++      K    +V GG +  +      PT+  DV 
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
               I  EE FGP++ I       ++      N+    LA+ +FT +        + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           G + IN    +    + PFGG ++SG G   G+ + + +   K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 171/424 (40%), Gaps = 29/424 (6%)
Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKP--ELESSIYEVALLKTSIKSALKELKHWMT 98
           R   L+ +   L E   +I   L  +  KP  E +  +   A         +  L     
Sbjct: 73  RRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTI 132
Query: 99  PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGAIAAGNALVLK---PSEVAPAS 155
           PEK K    T      +   P GV  +I PWN+P  +G IA   +  L    PS + PAS
Sbjct: 133 PEKPKDCTWT------VHYRPVGVTGLIVPWNFP--IGXIAKKLSAALAAGCPSVIKPAS 184
Query: 156 SSLLAKL----VGEYMDL--SSIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMA 207
            + L  +    V + +DL    + +V G  +    +L +  D   + +TG++ V R ++ 
Sbjct: 185 ETPLTXIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIV 244
Query: 208 AAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 267
             A+ +  + LELGG +P +     +L+ A   +I  K+    GQ C+  + I   +  A
Sbjct: 245 DTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFR-GGGQTCVCANRIFVHEKVA 303
Query: 268 PXXXXXXXXXXXXF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK- 325
                           G    +  D+  ++N   F ++ + L D    G  +  G++   
Sbjct: 304 DAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE 363
Query: 326 --NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 383
             + L   PT++  V R+     EE FGPL+P       E+  D  N     LA+Y+FT 
Sbjct: 364 LGDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTA 423
Query: 384 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
           + +  Q+    +  G +  N           PFGG + SG+G   G      F   + V 
Sbjct: 424 DAERAQRVAAGLRFGHVGWNTGTG--PTPEAPFGGXKASGIGREGGLEGLFEFVEAQTV- 480
Query: 444 SRGF 447
            RGF
Sbjct: 481 PRGF 484

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 151/345 (43%), Gaps = 28/345 (8%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 170
           EP GV  I+ PWNYP  +        +AAGN +V+KP++V P ++   A+L +   +   
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 171 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 227
            + ++ G+ +     L    D  KI +TG++ V + +M + A  ++  V L LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 287
             +  +L  A  +M M     N G+  I+   +   +                    NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 288 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 339
           E     R  N    NH A L KL++      K    +V GG +  +      PT+  DV 
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 340 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
               I  EE FGP++ I       ++      N+    LA+ +FT +        + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           G + IN    +    + PFGG ++SG G   G+ + + +   K V
Sbjct: 471 GTVFIN--TYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 192/442 (43%), Gaps = 38/442 (8%)
Query: 24  KELRGTFASGKTKSYGW-------RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSI 76
           K+L   F   +     W       R + L+     L+E   DI+  + ++     ++S+I
Sbjct: 44  KQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI 103
Query: 77  YEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNY 131
                    ++  +  L   MT       +   PS  E     I   P GV+  ISP+N+
Sbjct: 104 --------ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNF 155
Query: 132 PFFVG------AIAAGNALVLKPS-EVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAET 182
           P  +       AIA GN++V KP  + A +  +++AK   E+  L +  + V+   V E 
Sbjct: 156 PMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAF-EHAGLPAGVLNVMLTDVKEI 214
Query: 183 -SALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRR 240
              +L     + I +TG++ V R +   A +    + LELGG +P    S  ++  A   
Sbjct: 215 GDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDA 274
Query: 241 MIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSN 299
            I GK+  + GQ C+  + II  +D Y               YG        +  ++N  
Sbjct: 275 AIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINER 333
Query: 300 HFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILT 358
              +  ++++  K  G ++   G+R  N L   P + +    +S I   E+F P+  I+ 
Sbjct: 334 QIEKALEIIEQAKTDGIELAVEGKRVGNVL--TPYVFVGADNNSKIAQTELFAPIATIIK 391
Query: 359 VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGG 418
               +++ D+ N     L++ +FT++ +  ++F   + +G   +ND +V+ +  ++ FGG
Sbjct: 392 AGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDS-PNIAFGG 450
Query: 419 VQESGMGAYHGKFSFDVFSHKK 440
            + SG+G +   +  + F+  K
Sbjct: 451 NKASGVGRFGNPWVVEEFTVTK 472

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 150/341 (43%), Gaps = 16/341 (4%)
Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 171
           P GVV  I+P+N+P  V       AIA GN  +LKPSE  P  +  L +L  +  +    
Sbjct: 141 PIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGV 200
Query: 172 IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 230
             VV GA    + +L+    K I + G+  V   V    +++L  V    G K+  +  +
Sbjct: 201 FNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLN 260
Query: 231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 290
             NL+     ++   +G + G+ C++   +   +  A                 N L+  
Sbjct: 261 DANLEDTVTNIVGAAFG-SAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDG 319
Query: 291 D-LSRIVNSNHFAR-LSKLLDDDKVSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMS 346
             L  ++  ++  R LS +    +   ++V  G  +   +   + PT+  +V  +  I  
Sbjct: 320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWK 379
Query: 347 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTA 406
           +EIF P+L ++ V  ++++ +I N       A LFT+N    + F E + AG L IN   
Sbjct: 380 DEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGIN-LG 438
Query: 407 VHLAVHSLPFGGVQESGMGAYH--GKFSFDVFSHKKAVLSR 445
           V   +   PF G + S  G  H  GK S D ++ KK V +R
Sbjct: 439 VPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/406 (22%), Positives = 166/406 (40%), Gaps = 30/406 (7%)
Query: 40  WRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL---KTSIKSALKELKHW 96
           WR  +  S  ++L+    DI +AL++  D+     ++    LL   K  ++  +    ++
Sbjct: 42  WRHEEPASRAEILH----DIANALKEHEDELAKXXTLEXGKLLSESKEEVELCVSICNYY 97
Query: 97  MT--PEKAK-TSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVGAIAAGNALVLK 147
               PE  K T + +   +A  + +  GV+    PWN+P       F      GN ++LK
Sbjct: 98  ADHGPEXLKPTKLNSDLGNAYYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLK 157
Query: 148 PSEVAPASSSLLAKLVGEYM--DLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIV 205
            +   P S++L AK++      + S I +          + D +   +  TG+ R    V
Sbjct: 158 HAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAV 217
Query: 206 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 265
             AA K+L     ELGG    +     + +V  R ++      N+GQ C S   II  K 
Sbjct: 218 AEAAGKNLKKSTXELGGNDAFIVLDDADPQV-LRNVLNDARTYNDGQVCTSSKRIIVEKS 276
Query: 266 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHF-----ARLSKLLDDDKVSGKIVHG 320
                              +PLE+       NS        A++ + +D      K+ + 
Sbjct: 277 RYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAID---AGAKVFYQ 333
Query: 321 -GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 379
             E D       PT+L D+ +D+ +  +E+FGP+  +  V+    +  + N  +  L + 
Sbjct: 334 YPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSS 393
Query: 380 LFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 425
           +  ++    ++    +  G  VIN     +    LPFGG+++SG G
Sbjct: 394 VIGSDIDRAKKVSAQIETGXTVIN--GRWITSGELPFGGIKKSGYG 437

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 20/321 (6%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLV---GEYMD 168
           EP GVV  I+P+NYP F        +   GNA+V+KPS   P  +++  K +   G   D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 169 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVLLELGGKSPVV 227
             ++  + G  AE   + D +   + +TG++ V  R+V     K     ++ELGG  P +
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 286
                +L +A  ++  G +    GQ C +   ++  +  Y                G   
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 287 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL---LDVPRDSL 343
             + D+  +++ +    +   ++D    G  V  G R      + PTL+    D  +D +
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMV 390
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
           +   E+F P+   + V  ++ + ++ N     L A +F  +    ++ V  +  G + IN
Sbjct: 391 LYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
Query: 404 DTAVHLAVHSLPFGGVQESGM 424
           D   H  +   PFGG ++SG+
Sbjct: 451 DMPRH-GIGYYPFGGRKKSGV 470

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 20/321 (6%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLV---GEYMD 168
           EP GVV  I+P+NYP F        +   GNA+V+KPS   P  +++  K +   G   D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 169 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVLLELGGKSPVV 227
             ++  + G  AE   + D +   + +TG++ V  R+V     K     ++ELGG  P +
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 286
                +L +A  ++  G +    GQ C +   ++  +  Y                G   
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 287 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL---LDVPRDSL 343
             + D+  +++ +    +   ++D    G  V  G R      + PTL+    D  +D +
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMV 390
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
           +   E+F P+   + V  ++ + ++ N     L A +F  +    ++ V  +  G + IN
Sbjct: 391 LYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
Query: 404 DTAVHLAVHSLPFGGVQESGM 424
           D   H  +   PFGG ++SG+
Sbjct: 451 DMPRH-GIGYYPFGGRKKSGV 470

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 138/321 (42%), Gaps = 20/321 (6%)
Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLV---GEYMD 168
           EP GVV  I+P+NYP F        +   GNA+V+KPS   P  +++  K +   G   D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 169 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVLLELGGKSPVV 227
             ++  + G  AE   + D +   + +TG++ V  R+V     K     ++ELGG  P +
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 286
                +L +A  ++  G +    GQ C +   ++  +  Y                G   
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 287 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL---LDVPRDSL 343
             + D+  +++ +    +   ++D    G  V  G R      + PT +    D  +D +
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMV 390
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
           +   E+F P+   + V  ++ + ++ N     L A +F  +    ++ V  +  G + IN
Sbjct: 391 LYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
Query: 404 DTAVHLAVHSLPFGGVQESGM 424
           D   H  +   PFGG ++SG+
Sbjct: 451 DMPRH-GIGYYPFGGRKKSGV 470

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 140/348 (40%), Gaps = 24/348 (6%)
Query: 118 EPFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 170
           +P G+   I+P+N+P       F  AIA GNA +LKPSE  P+    LA+L  E  +   
Sbjct: 161 QPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAGLPAG 220
Query: 171 SIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 229
            + VV G      A+L       + + G++ +AR V   AA +        G K+  +  
Sbjct: 221 ILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXIIX 280
Query: 230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-- 287
              +L  A   +I   +G + G+ C +    +   +                    P   
Sbjct: 281 PDADLDQAANALIGAGYG-SAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGPYTD 339
Query: 288 ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLDVPR 340
           E  D   +V      R+  L+D     G K+V  G RD      +N   I   L  DV  
Sbjct: 340 EKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDG-RDFKLQGYENGHFIGGCLFDDVTP 398
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
           D  I   EIFGP+L ++     E++  +           ++T +    + F   ++ G +
Sbjct: 399 DXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIGXV 458
Query: 401 VIN-DTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 445
            +N    V LA HS  FGG + S  G    HG  S   ++  K + SR
Sbjct: 459 GVNVPIPVPLAYHS--FGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504

>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 95/427 (22%), Positives = 172/427 (40%), Gaps = 30/427 (7%)
Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           DA      V   R  F +   +    R+  L+     L  R  ++   + ++  KP  ES
Sbjct: 40  DATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWES 99
Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFP---SSAEIVPEPFGVVLIISPWNY 131
           +        T + S + ++   +   + +T   + P   ++A +  +P GVV +  P+N+
Sbjct: 100 A--------TEVTSXVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNF 151
Query: 132 P------FFVGAIAAGNALVLKPSEVAPASSSL-LAKLVGEYMDLSSIRVVEGAVAETSA 184
           P        V A+ AGN +V KPSE+ P  + L L   +   +    + +V+G      A
Sbjct: 152 PGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVA 211
Query: 185 LLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFDSGINLKVACRRMI 242
           L   +  D + +TG+SR   ++ +        +L LE GG +P+V +   +L  A   +I
Sbjct: 212 LAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTII 271
Query: 243 MGKWGCNNGQACISPDHIITTKD------YAPXXXXXXXXXXXXFYGKNPLESKDLSRIV 296
              +  + GQ C     ++  +        A             F  +       +  + 
Sbjct: 272 QSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFXGAVISLS 330
Query: 297 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI 356
            + H  +  + L        +      D   L + P  +LDV   +    EE FGPLL +
Sbjct: 331 AAEHLLKAQEHLIGKGAQPLLAXTQPIDGAAL-LTPG-ILDVSAVAERPDEEFFGPLLQV 388
Query: 357 LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPF 416
           +       +    N+    LAA L +++++  +QF+   S  G+V  +  +  A  S PF
Sbjct: 389 IRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFL-VESRAGIVNWNKQLTGAASSAPF 447
Query: 417 GGVQESG 423
           GG+  SG
Sbjct: 448 GGIGASG 454

>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/351 (20%), Positives = 150/351 (42%), Gaps = 18/351 (5%)
Query: 119 PFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 172
           P G+V II+ +N+P  V       A+  GN  + K +   P +S  + K+V E ++ +++
Sbjct: 155 PVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNL 214
Query: 173 ------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 226
                     GA   T+   D++ D + +TG++ V ++V     +     LLELGG + +
Sbjct: 215 PGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAI 274
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
           +     +L +     +    G   GQ C +   ++  +                    +P
Sbjct: 275 IVFEDADLNLVVPSAVFASVG-TAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDP 333
Query: 287 LESKDLSRIVNSNHFA--RLSKLLDDDKVSGKIVHGGE-RDKNKLRIAPTLLLDVPRDSL 343
            +   L   +++       L+ +    +  G +V GG+  D+    + PT++  +  D+ 
Sbjct: 334 WDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAP 393
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-KKLKQQFVETVSAGGLVI 402
           I+  E F P+L +L     E++F   N   + L++ +FT +  ++ +      S  G+V 
Sbjct: 394 IVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVN 453
Query: 403 NDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPV 453
            +     A     FGG + +G G   G  S+  +  +++  +  +  D+P+
Sbjct: 454 VNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQY-MRRSTCTINYSKDLPL 503

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 129/329 (39%), Gaps = 18/329 (5%)
Query: 118 EPFGVVLIISPWNYPFFV------GAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MD 168
           EP GV  +I+PWN+P  +       AI  GN +V KPS +       L +L  E      
Sbjct: 665 EPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEG 724
Query: 169 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKH-----LTPVLLELGG 222
           + +     G+V     +       I +TG+     RI+  AA  H     +  ++ E+GG
Sbjct: 725 VFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGG 784
Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 281
           K+ ++ D   +L  A   ++   +G   GQ C +   +I     Y               
Sbjct: 785 KNAIIIDDDADLDEAVPHVLYSAFGFQ-GQKCSACSRVIVLDAVYDKFIERLVSMAKATK 843
Query: 282 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP-TLLLDVPR 340
            G +   +  +  + +      + +  +  K  G +++       +    P T++  +  
Sbjct: 844 VGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKP 903
Query: 341 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 400
           +  I  EEIFGP+L ++     + + +  NS    L   +F+ + +   +       G L
Sbjct: 904 EHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNL 963
Query: 401 VINDTAVHLAVHSLPFGGVQESGMGAYHG 429
            IN       V   PFGG + SG+G   G
Sbjct: 964 YINRNNTGALVERQPFGGARMSGVGTKAG 992

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 139/327 (42%), Gaps = 25/327 (7%)
Query: 121 GVVLIISPWNYPFFVGAIAA-----GNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 174
           G V  ISP+N+    G +A      GN ++ KPS+ A  +S  + +++ E  +  + I+ 
Sbjct: 202 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 261
Query: 175 V--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLT-----PVLL-ELGGKSPV 226
           V  +G     +    +    I +TG+    + +    A++L      P L  E GGK+  
Sbjct: 262 VPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFH 321
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
              S  ++       +   +    GQ C +   +   K   P                +P
Sbjct: 322 FVHSSADVDSVVSGTLRSAFE-YGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDP 380
Query: 287 LE--SKDLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRD 341
            E      S ++++  FAR+ K L+  + S    I+ GG+ +++    + P ++      
Sbjct: 381 AEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQ 440
Query: 342 SLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--S 396
             IM EEIFGP+L +     DK  ++  +++S T   L   +F  +K + Q+    +  +
Sbjct: 441 EPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNA 500
Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESG 423
           AG   IND +    V   PFGG + SG
Sbjct: 501 AGNFYINDKSTGSVVGQQPFGGARASG 527

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 140/327 (42%), Gaps = 25/327 (7%)
Query: 121 GVVLIISPWNYPFFVGAIAA-----GNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 174
           G V  ISP+N+    G +A      GN ++ KPS+ A  +S  + +++ E  +  + I+ 
Sbjct: 205 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 175 V--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-----HLTPVLL-ELGGKSPV 226
           V  +G +   +    +    I +TG+    + +    A+     H  P L  E GGK+  
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
                 +++      +   +    GQ C +   +       P                +P
Sbjct: 325 FVHRSADVESVVSGTLRSAFE-YGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
Query: 287 LE--SKDLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRD 341
            E      S ++++  FAR+ K L+  + S    I+ GG+ D +    + P ++      
Sbjct: 384 AEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQ 443
Query: 342 SLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--S 396
             IM EEIFGP+L +     DK +++  +++S T   L   +F+ +K + Q+  + +  +
Sbjct: 444 EPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNA 503
Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESG 423
           AG   IND +    V   PFGG + SG
Sbjct: 504 AGNFYINDKSTGSIVGQQPFGGARASG 530

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 140/327 (42%), Gaps = 25/327 (7%)
Query: 121 GVVLIISPWNYPFFVGAIAA-----GNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 174
           G V  ISP+N+    G +A      GN ++ KPS+ A  +S  + +++ E  +  + I+ 
Sbjct: 205 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 175 V--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-----HLTPVLL-ELGGKSPV 226
           V  +G +   +    +    I +TG+    + +    A+     H  P L  E GGK+  
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
                 +++      +   +    GQ C +   +       P                +P
Sbjct: 325 FVHRSADVESVVSGTLRSAFE-YGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
Query: 287 LE--SKDLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRD 341
            E      S ++++  FAR+ K L+  + S    I+ GG+ D +    + P ++      
Sbjct: 384 AEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQ 443
Query: 342 SLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--S 396
             IM EEIFGP+L +     DK +++  +++S T   L   +F+ +K + Q+  + +  +
Sbjct: 444 EPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNA 503
Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESG 423
           AG   IND +    V   PFGG + SG
Sbjct: 504 AGNFYINDKSTGSIVGQQPFGGARASG 530

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 140/327 (42%), Gaps = 25/327 (7%)
Query: 121 GVVLIISPWNYPFFVGAIAA-----GNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 174
           G V  ISP+N+    G +A      GN ++ KPS+ A  +S  + +++ E  +  + I+ 
Sbjct: 205 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 175 V--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-----HLTPVLL-ELGGKSPV 226
           V  +G +   +    +    I +TG+    + +    A+     H  P L  E GGK+  
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
                 +++      +   +    GQ C +   +       P                +P
Sbjct: 325 FVHRSADVESVVSGTLRSAFE-YGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383
Query: 287 LE--SKDLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRD 341
            E      S ++++  FAR+ K L+  + S    I+ GG+ D +    + P ++      
Sbjct: 384 AEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQ 443
Query: 342 SLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--S 396
             IM EEIFGP+L +     DK +++  +++S T   L   +F+ +K + Q+  + +  +
Sbjct: 444 EPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNA 503
Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESG 423
           AG   IND +    V   PFGG + SG
Sbjct: 504 AGNFYINDKSTGSIVGQQPFGGARASG 530

>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 20/324 (6%)
Query: 121 GVVLIISPWNYPF--FVG----AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIR 173
           GV + ISPWN+P   F+G    A+ AGN++V KP+E  P  +     L+ E  +  S++ 
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALY 710
Query: 174 VVEGAVAETSALLDQKWD--KICYTGNSRVAR-IVMAAAAKH--LTPVLLELGGKSPVVF 228
           +V G      A L    D   + +TG++ VAR I  A AAK   + P++ E GG + ++ 
Sbjct: 711 LVTGD-GRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIA 769
Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 288
           D+    +     ++   +  + GQ C +   +   +D A                 +P +
Sbjct: 770 DATALPEQVADDVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSD 828
Query: 289 -SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 347
            +  +  +++     RL   +   K   ++   G   +    +AP +        L  +E
Sbjct: 829 VATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCF-VAPHIFELTEAGQL--TE 885
Query: 348 EIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDT 405
           E+FGP+L ++    + +E     I      L   + +      +  ++ V  G + +N  
Sbjct: 886 EVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRN 945
Query: 406 AVHLAVHSLPFGGVQESGMGAYHG 429
            +   V   PFGG   SG G   G
Sbjct: 946 MIGAVVGVQPFGGNGLSGTGPKAG 969

>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 137/337 (40%), Gaps = 17/337 (5%)
Query: 119 PFGVVLIISPWNYPFFV----GAIA--AGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 172
           P G+V II+ +N+P  V     AIA   GN  + K +      S  + K++ + ++ + +
Sbjct: 157 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKL 216
Query: 173 ------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 226
                     GA   T+   D++ + + +TG+++V + V     +     LLELGG + +
Sbjct: 217 PGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAI 276
Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 286
           +     +L +     +    G   GQ C +   +   +                    NP
Sbjct: 277 IAFEDADLSLVVPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP 335
Query: 287 LESKDLSRIVNSNHFAR--LSKLLDDDKVSGKIVHGGE-RDKNKLRIAPTLLLDVPRDSL 343
            +   L   +++       L  + +  K  G +V+GG+  D+    + PT++  +  D+ 
Sbjct: 336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDAS 395
Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN-KKLKQQFVETVSAGGLVI 402
           I   E F P+L +      E+ F   N   + L++ +FT +  ++ +      S  G+V 
Sbjct: 396 IAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVN 455
Query: 403 NDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHK 439
            +     A     FGG + +G G   G  ++  +  +
Sbjct: 456 VNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRR 492

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	487
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	0.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	0.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	1e-61
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	9e-61
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	4e-60
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	8e-60
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	4e-58
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	5e-58
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	9e-58
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	9e-57
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	4e-56
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	2e-54
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	2e-54
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	2e-52
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	2e-52
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	3e-52
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	3e-52
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	2e-51
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	1e-50
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	2e-50
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	5e-50
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	7e-50
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	1e-49
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	3e-49
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	7e-49
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	1e-48
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	1e-48
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	3e-48
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	3e-47
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	5e-46
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	7e-45
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	7e-43
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	2e-42
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	2e-40
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	3e-40
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	3e-40
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	4e-40
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	6e-40
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	1e-38
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	2e-37
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	3e-37
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	4e-36
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	2e-34
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	2e-34
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	1e-30
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	8e-30
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score =  692 bits (1788), Expect = 0.0
 Identities = 194/450 (43%), Positives = 283/450 (62%), Gaps = 13/450 (2%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           VK  R  F+SG+T+   +R+ QL++L +++ E+E ++V AL  DL K E  +   EV  +
Sbjct: 24  VKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYV 83

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VG 136
              I+  +++L  W   E  + +  T      I  EP GVVL+I  WNYPF       VG
Sbjct: 84  LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG 143

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           AIAAGNA+VLKPSE++   +SLLA ++ +Y+D     V+ G V ET+ LL +++D I YT
Sbjct: 144 AIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYT 203

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           G++ V +I+M AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++
Sbjct: 204 GSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVA 262

Query: 257 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD+I+       +++E LK  L+ FYG++  +S+D  RI+++ HF R+  L++      K
Sbjct: 263 PDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEG----QK 318

Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
           + +GG  D     IAPT+L DV   S +M EEIFGP+LPI+ V  +E++   IN   KPL
Sbjct: 319 VAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPL 378

Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A Y+F++N K+ ++ +   S+GG+  ND  VH+ +HSLPFGGV  SGMG+YHGK SF+ F
Sbjct: 379 ALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETF 438

Query: 437 SHKKAVLSRGFIGD--VPVRYPPYTKGKLR 464
           SH+++ L R  + D  + VRYPP      +
Sbjct: 439 SHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ 468

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score =  586 bits (1512), Expect = 0.0
 Identities = 140/430 (32%), Positives = 224/430 (52%), Gaps = 14/430 (3%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
               +  FA+  T   G+R   L+ L + +   +  +  AL +DL KP+    + E+  +
Sbjct: 34  FSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAV 93

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VG 136
              I  AL  L  W+ P    +     PS   +V EP+GV  II P+NYP        +G
Sbjct: 94  LHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIG 153

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           AI  GN  ++KPSE  P +S+++ K++ E      + V++G   E S LL   +D I +T
Sbjct: 154 AIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFT 213

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           G+  V ++VM AAAKHLTPV+LELGGK P++     +L     +++ GK+  N+GQ  I+
Sbjct: 214 GSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKF-INSGQTXIA 272

Query: 257 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD++         LLE L   ++    +         ++V      RL  LL+  +  G+
Sbjct: 273 PDYLYVHYSVKDALLERLVERVKTELPEIN----STGKLVTERQVQRLVSLLEATQ--GQ 326

Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG-TKP 375
           ++ G + D +K  ++ T++  V  +  +MSEE+FGP+LP+L  D +  + D +N    KP
Sbjct: 327 VLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKP 386

Query: 376 LAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDV 435
           LA Y+F  +  + +  +  + +G   +N   +H     LPFGG+  SGMG YHG FS+  
Sbjct: 387 LAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLT 446

Query: 436 FSHKKAVLSR 445
           F+HKK+V   
Sbjct: 447 FTHKKSVRIV 456

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  208 bits (532), Expect = 1e-61
 Identities = 101/436 (23%), Positives = 187/436 (42%), Gaps = 38/436 (8%)

Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
           R + +    ++L E   +IV+ L ++      ++++ E+ L     K             
Sbjct: 74  RSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITK--------ESASF 124

Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPS 149
             +      PS+       +     GVV +ISPWN+P  +       A+A GNA+V+KP+
Sbjct: 125 PGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPA 184

Query: 150 EVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV 205
              P +  ++   + E   + +  I  V GA +E             I +TG++ V R V
Sbjct: 185 SDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244

Query: 206 M--AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIIT 262
              A     +  V LELGG +P VV     ++  A +   +G +  + GQ C+S + +I 
Sbjct: 245 GELAINGGPMKTVALELGGNAPFVVLADA-DIDAAAQAAAVGAFL-HQGQICMSINRVIV 302

Query: 263 TKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHG 320
                 + LE     ++N    +P      +  ++N +  + L + ++  K  G  +   
Sbjct: 303 DAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVE 362

Query: 321 GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 380
           G  +     + P +  DV  D  I  EEIFGPL+ +L  D    + ++ N+    L+A +
Sbjct: 363 GPIEGR--LVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAV 420

Query: 381 FTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKK 440
           ++ +     QF   + +G + IND  V+   H + FGG + SG+G ++G ++ + F+  +
Sbjct: 421 WSKDIDRAAQFALQIDSGMVHINDLTVNDEPH-VMFGGSKNSGLGRFNGDWAIEEFTTDR 479

Query: 441 AVLSRGFIGDVPVRYP 456
            +     I        
Sbjct: 480 WI----GIKRSAENLY 491

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  205 bits (524), Expect = 9e-61
 Identities = 91/344 (26%), Positives = 159/344 (46%), Gaps = 34/344 (9%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKL--------- 162
           EP G+VL ISP+NYP       +  A+ AGN +  KP      S  LLA+          
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201

Query: 163 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 220
           V           + G  +E    +   Q  + I +TG++ +   +   A   + P++LEL
Sbjct: 202 V--------FNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLEL 251

Query: 221 GGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 279
           GGK    V +   +L++  + +I G +G  +GQ C +   ++  +  A +L+E ++ ++ 
Sbjct: 252 GGKDSAIVLEDA-DLELTAKNIIAGAFG-YSGQRCTAVKRVLVMESVADELVEKIREKVL 309

Query: 280 NFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDV 338
                NP +  D++ ++++     +  L++D    G   +   +R+ N   I P L   V
Sbjct: 310 ALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGN--LICPILFDKV 367

Query: 339 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 398
             D  +  EE FGP+LPI+ V  +E++ +I N     L A +FTN+        E +  G
Sbjct: 368 TTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVG 427

Query: 399 GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            + IN+       +  PF G ++SG G    K+S +  +  K+V
Sbjct: 428 TVHINNKTQRGTDN-FPFLGAKKSGAGIQGVKYSIEAMTTVKSV 470

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  203 bits (520), Expect = 4e-60
 Identities = 96/434 (22%), Positives = 187/434 (43%), Gaps = 35/434 (8%)

Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
           R + L+     L+E   DI+  + ++     ++S+I E+      +  A+         +
Sbjct: 68  RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVK 126

Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPS 149
                    PS  E     I   P GV+  ISP+N+P  +       AIA GN++V KP 
Sbjct: 127 -------EVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPD 179

Query: 150 EVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIV 205
                S   +     E+  L +  + V+   V E    +  +     I +TG++ V R +
Sbjct: 180 IQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239

Query: 206 MAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 264
              A +    + LELGG +P  V     ++  A    I GK+  + GQ C+  + II  +
Sbjct: 240 GEIAGRAFKRMALELGGNNPFAVLSDA-DVDRAVDAAIFGKFI-HQGQICMIINRIIVHQ 297

Query: 265 DYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 322
           D   + +E     ++     +  + K  +  ++N     +  ++++  K  G ++   G+
Sbjct: 298 DVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357

Query: 323 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 382
           R  N L   P + +    +S I   E+F P+  I+     +++ D+ N     L++ +FT
Sbjct: 358 RVGNVL--TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFT 415

Query: 383 NNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           ++ +  ++F   + +G   +ND +V+ + +   FGG + SG+G +   +  + F+  K +
Sbjct: 416 SDLEKGEKFALQIDSGMTHVNDQSVNDSPNI-AFGGNKASGVGRFGNPWVVEEFTVTKWI 474

Query: 443 LSRGFIGDVPVRYP 456
                I     +YP
Sbjct: 475 S----IQKQYRKYP 484

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  203 bits (519), Expect = 8e-60
 Identities = 93/344 (27%), Positives = 154/344 (44%), Gaps = 34/344 (9%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKL--------- 162
           EP GVVL ISP+NYP       +  A+  GN +V KP+     S   + +          
Sbjct: 151 EPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEG 210

Query: 163 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 220
           +        I+VV G  +     L      D I +TG +     +   A   + PV+LEL
Sbjct: 211 I--------IQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLEL 260

Query: 221 GGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 279
           GGK P  V D   +LK+   +++ G +   +GQ C +   +      A +L+ ++K  +E
Sbjct: 261 GGKDPAIVLDDA-DLKLTASQIVSGAFS-YSGQRCTAIKRVFVQDSVADQLVANIKELVE 318

Query: 280 NFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDV 338
                +P +  D++ +++    A +  L+DD   +G  ++ G +R  N   ++PTLL DV
Sbjct: 319 QLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGN--LLSPTLLDDV 376

Query: 339 PRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 398
                +  EE FGP+LPI+ V    ++  + N     L A +FT +        + +  G
Sbjct: 377 TPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVG 436

Query: 399 GLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            + IN        H  PF GV++SG+G    K S    + ++  
Sbjct: 437 TVHINAKTERGPDH-FPFLGVKKSGLGVQGIKPSLLSMTRERVT 479

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  200 bits (510), Expect = 4e-58
 Identities = 95/385 (24%), Positives = 162/385 (42%), Gaps = 31/385 (8%)

Query: 96  WMTPEKAKTSITTFPSS-AEIVPEPFGVVLIISPWNYPF--FVG----AIAAGNALVLKP 148
            M        I + P         P GV + ISPWN+     VG     I  GN +VLKP
Sbjct: 148 QMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKP 207

Query: 149 SEVAPASSSLLAKLVGEYMDLSS------IRVVEGAVAETSALL--DQKWDKICYTGNSR 200
           +   P  ++   +++ +     +      I  V G+ AE    L    K   I +TG+  
Sbjct: 208 ASTTPVVAAKFVEVLED-----AGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKD 262

Query: 201 VARIVMAAAAK------HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQAC 254
           V   +   AA       HL  V++E+GGK  VV D   +L +A   +++  +G  +GQ C
Sbjct: 263 VGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFG-FSGQKC 321

Query: 255 ISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKV 313
            +    +  KD   ++LE      +N    +P      +  +++   F ++   ++  K 
Sbjct: 322 SAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKK 381

Query: 314 SGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 372
            G+++ GGE D +    I PT++ D+  +++IM EEIFGP++     +  + + +I N+ 
Sbjct: 382 EGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNT 441

Query: 373 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYH-GKF 431
              L   + T N+   +Q       G L  N       V   PFGG + SG  +   G  
Sbjct: 442 EYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPD 501

Query: 432 SFDVFSHKKAVLSRGFIGDVPVRYP 456
              +    K V S  +  ++  +  
Sbjct: 502 YLALHMQAKTV-SEMYAENLYFQSH 525

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  198 bits (507), Expect = 5e-58
 Identities = 75/346 (21%), Positives = 151/346 (43%), Gaps = 34/346 (9%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLV-------G 164
           EP GVV  I+P+NYP F     +  +   GNA+V+KPS   P  +++  K +        
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215

Query: 165 EYMDLSSIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAA-KHLTPVLLELGG 222
                 +I ++     E   ++ D +   + +TG++ V   V+     K      +ELGG
Sbjct: 216 ------AIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGGVKQYV---MELGG 266

Query: 223 KSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 281
             P  V +   +L +A  ++  G +    GQ C +   ++  +    KL+E +   L + 
Sbjct: 267 GDPAIVLEDA-DLDLAADKIARGIYS-YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSL 324

Query: 282 YGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLL--- 336
              +P +   D+  +++ +    +   ++D    G +++ GG R      + PT +    
Sbjct: 325 RVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTY-VQPTFVEAPA 383

Query: 337 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 396
           D  +D ++   E+F P+   + V  ++ + ++ N     L A +F  +    ++ V  + 
Sbjct: 384 DRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLE 443

Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            G + IND      +   PFGG ++SG+      ++ +  +  K +
Sbjct: 444 VGAIYINDMPR-HGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 488

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  197 bits (503), Expect = 9e-58
 Identities = 109/446 (24%), Positives = 190/446 (42%), Gaps = 34/446 (7%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           D + A   V+     +   +  S   R + L  ++K    R+ DIV A+  +L  P   S
Sbjct: 46  DVDKA---VEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLS 102

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF 134
                 +      +A   L                     +V E  GV  +I+PWN+P  
Sbjct: 103 ERVHYQMGLNHFVAARDALD--------NYEFEERRGDDLVVKEAIGVSGLITPWNFPTN 154

Query: 135 -----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL 186
                +  A AAG+ +VLKPSE  P ++ +LA++  + + +      +V G  A     L
Sbjct: 155 QTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDK-VGVPKGVFNLVNGDGAGVGNPL 213

Query: 187 DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIM 243
            +  K   + +TG+      +M  AAK    V LELGGKSP +V D  +++K A +    
Sbjct: 214 SEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLD-DVDIKEAAKATTG 272

Query: 244 GKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFA 302
                N GQ C +   ++         L  LK +       NP  +   +  I++   F 
Sbjct: 273 KVVN-NTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFD 331

Query: 303 RLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLPIL 357
           ++   ++     G ++ +GG      L       PT+ ++V     I  EEIFGP++ ++
Sbjct: 332 QVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVI 391

Query: 358 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 417
           T + ++++  I N     LA Y+   +K+   +   ++ AG + IN+      +   PFG
Sbjct: 392 TYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL---PFG 448

Query: 418 GVQESGMGAYHGKFSFDVFSHKKAVL 443
           G ++SG+G   G +  + F   K++ 
Sbjct: 449 GYKQSGLGREWGDYGIEEFLEVKSIA 474

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  195 bits (497), Expect = 9e-57
 Identities = 104/341 (30%), Positives = 178/341 (52%), Gaps = 25/341 (7%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           EP G+V  I+P+N+P       +  AIA GN +V  PS  AP     LAK++   +   +
Sbjct: 129 EPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYN 188

Query: 172 I-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 224
           +      ++ GA       +  ++K + I +TG+S+V  ++   A      + LELGG +
Sbjct: 189 VPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVN 246

Query: 225 PV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 283
           P  V     +L  A   +I G +    GQ CIS   I+  +  A K +E   N+ +    
Sbjct: 247 PNIVLKDA-DLNKAVNALIKGSFI-YAGQVCISVGMILVDESIADKFIEMFVNKAKVLNV 304

Query: 284 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRD 341
            NPL+ K D+  +++  H   + K+++     G K++ GG+RDK      PT+L +V RD
Sbjct: 305 GNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKA--LFYPTIL-EVDRD 361

Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
           +++   E F P++PI+  ++ E+  DI NS    L + +FTN+     +F E +  GG+V
Sbjct: 362 NILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVV 420

Query: 402 INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           IND+++     ++PFGGV++SG+G    K++ +  S+ K +
Sbjct: 421 INDSSL-FRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTI 460

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  193 bits (493), Expect = 4e-56
 Identities = 103/447 (23%), Positives = 197/447 (44%), Gaps = 35/447 (7%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           DA+ A   +   +  F + KT S   R+  ++ ++++  +R  D+   +  ++  P   +
Sbjct: 64  DADKA---INAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMA 120

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF 134
              + A   + I++ +K           + ++      A +  +  GVV +I+PWN+P  
Sbjct: 121 LNAQTATGSSHIRNFIK----AYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMN 176

Query: 135 -----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETSALL 186
                V  A+ AG  +VLKPSE+AP S+ L A+++ E   L S    ++ G  A   + L
Sbjct: 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDE-AALPSGVFNLINGDGANVGSYL 235

Query: 187 DQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIM 243
                 + I +TG++R  + +   A+  L  V LELGGK   ++F    ++         
Sbjct: 236 SAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFA-DADIDAL----QR 290

Query: 244 GKWGC--NNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNH 300
           G   C  N+GQ+C +P  ++  +    K +++ K+  E        ++   +  +V+   
Sbjct: 291 GVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQ 350

Query: 301 FARLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLLLDVPRDSLIMSEEIFGPLLP 355
           + ++  L+      G  +V GG      +     + PT+  DV     I  EEIFGP+L 
Sbjct: 351 YDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLS 410

Query: 356 ILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLP 415
           +L  +  +++  + N     L  Y+ + ++   ++    V +G + +N   +        
Sbjct: 411 LLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGHELPGGS---Y 467

Query: 416 FGGVQESGMGAYHGKFSFDVFSHKKAV 442
           FGGV+ SG     G +    F   KA+
Sbjct: 468 FGGVKFSGRAREGGLWGIKEFLDTKAI 494

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  189 bits (482), Expect = 2e-54
 Identities = 117/470 (24%), Positives = 191/470 (40%), Gaps = 57/470 (12%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGW-------RVSQLKSLMKMLNEREPDIVDALRQDL 67
           D +AA   V   R  F +G      W       R + + + +KML ER+      L  + 
Sbjct: 47  DVDAA---VAAARAAFDNG-----PWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAET 98

Query: 68  DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
            +P              ++                  + T     + +  EP GVV  I 
Sbjct: 99  GQPPTIIETMHWMGSMGAMNYFAG----AADKVTWTETRTGSYGQSIVSREPVGVVGAIV 154

Query: 128 PWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAV-- 179
            WN P F     +  A+ AG  +VLKP+   P +++ LA++  E      + + EG +  
Sbjct: 155 AWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAE------VGLPEGVLSV 208

Query: 180 ----AETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGI 232
                ET   L  +   D   +TG+S V R V   AA+ L P  LELGGKS  ++ +   
Sbjct: 209 VPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDV- 267

Query: 233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-D 291
           +L  A   M+      N GQ C++   I+  +    +++ ++ N +       P +    
Sbjct: 268 DLAAAIPMMVFSGVM-NAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ 326

Query: 292 LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPTLLLDVPRDSLIMSE 347
           +  +++     R+   +      G ++V GG R +       I PT+  DV     I  E
Sbjct: 327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQE 386

Query: 348 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 407
           EIFGP+L I+  D  ED+  I N     LA  ++T +     +  + +  G   IN  A 
Sbjct: 387 EIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYAF 446

Query: 408 HLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPP 457
                  PFGG + SG+G  +G    + F+ +K+VL       +P+ Y  
Sbjct: 447 DPGS---PFGGYKNSGIGRENGPEGVEHFTQQKSVL-------LPMGYTV 486

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  189 bits (482), Expect = 2e-54
 Identities = 86/352 (24%), Positives = 153/352 (43%), Gaps = 28/352 (7%)

Query: 113 AEIVPEPFGVVLIISPWNYPF--FVG----AIAAGNALVLKPSEVAPASSSLLAKLVGEY 166
            E    P G  ++I+PWN+P   F G     +A GN ++ KP+E A    + + ++  E 
Sbjct: 167 NESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHE- 225

Query: 167 MDLSS------IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------H 212
               +      +  + G   E  A L    +   I +TG+  V   +  AA +       
Sbjct: 226 ----AGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTW 281

Query: 213 LTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLE 272
                +E GGK+ ++ D   +  +A   +++  +G   GQ C +   +I T+     +LE
Sbjct: 282 FKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYG-FQGQKCSAASRLILTQGAYEPVLE 340

Query: 273 SLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIA 331
            +    E        E+ DL  +V++    ++   ++  K  G++V GG+R + +   IA
Sbjct: 341 RVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIA 400

Query: 332 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 391
           PT+  +VP  + I  EEIFGP+L ++ V    ++ ++ N     L   +++  ++  +  
Sbjct: 401 PTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWA 460

Query: 392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSF-DVFSHKKAV 442
                 G L  N       V   PFGG + SG  A  G   +  +F   KAV
Sbjct: 461 RREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  183 bits (467), Expect = 2e-52
 Identities = 92/439 (20%), Positives = 172/439 (39%), Gaps = 45/439 (10%)

Query: 29  TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
            +   + +    R   L  +   L E E ++   +  ++ K  L  S  EV         
Sbjct: 38  LYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKL-LSESKEEVE------LC 90

Query: 89  AL------KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF-----FVG- 136
                         + P K  +       +A  + +  GV++   PWN+P          
Sbjct: 91  VSICNYYADHGPEMLKPTKLNSD----LGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAP 146

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALL-DQ 188
               GN ++LK +   P S++L AK++       G          +  +  + + ++ D 
Sbjct: 147 NFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSL------INLYPSYDQLADIIADP 200

Query: 189 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWG 247
           +   +  TG+ R    V  AA K+L    +ELGG    +V D   + +V    +   +  
Sbjct: 201 RIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDA-DPQVLRNVLNDARTY 259

Query: 248 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSK 306
            N+GQ C S   II  K    ++L  LKN   N    +PLE+   L  + +     +L  
Sbjct: 260 -NDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEA 318

Query: 307 LLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 364
            + +   +G K+ +     D       PT+L D+ +D+ +  +E+FGP+  +  V+    
Sbjct: 319 QVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNA 378

Query: 365 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 424
           +  + N  +  L + +  ++    ++    +  G  VIN   +      LPFGG+++SG 
Sbjct: 379 AIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGE--LPFGGIKKSGY 436

Query: 425 GAYHGKFSFDVFSHKKAVL 443
           G          F ++  V+
Sbjct: 437 GRELSGLGLMAFVNEHLVI 455

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  182 bits (465), Expect = 2e-52
 Identities = 101/447 (22%), Positives = 175/447 (39%), Gaps = 49/447 (10%)

Query: 29  TFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKS 88
            F   K  S   R   L+ + + L     ++   + +++ KP ++ +  EV       KS
Sbjct: 41  GFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP-IKQARAEVT------KS 93

Query: 89  AL------KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF-----FVG- 136
           A       +     + PE            A I   P GV+L I PWN+P          
Sbjct: 94  AALCDWYAEHGPAMLNPEPTLVE----NQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVP 149

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALL-DQ 188
            + AGN+ +LK +      + ++A+++       G Y        V       S ++ D 
Sbjct: 150 ILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVY------GWVNANNEGVSQMINDP 203

Query: 189 KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWG 247
           +   +  TG+ R    + A A   L   +LELGG  P +V +   +L++A +  + G++ 
Sbjct: 204 RIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDA-DLELAVKAAVAGRYQ 262

Query: 248 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK-DLSRIVNSNHFARLSK 306
            N GQ C +    I  +  A    +            +PL  + DL  +   +    L +
Sbjct: 263 -NTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQ 321

Query: 307 LLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 364
            +      G +++ GGE+        A T+L DV  D     +E+FGP+  I        
Sbjct: 322 QVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAH 381

Query: 365 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 424
           +  + N     L+A +FT +  L  +    +  GG+ IN  +   A   + FGGV++SG 
Sbjct: 382 ALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDAR--VAFGGVKKSGF 439

Query: 425 GAYHGKFSFDVFSHKKAVLSRGFIGDV 451
           G     F    F + + V    +   V
Sbjct: 440 GRELSHFGLHEFCNVQTV----WKNRV 462

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  183 bits (466), Expect = 3e-52
 Identities = 90/342 (26%), Positives = 155/342 (45%), Gaps = 19/342 (5%)

Query: 115 IVPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
           I  +P GVV  I+PWNYP  +       A+AAGN +VLKPSE+ P ++  LA+L  +   
Sbjct: 155 IRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP 214

Query: 169 LSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP- 225
              + ++ G        L    K   +  TG+      +++  A  +    +ELGGK+P 
Sbjct: 215 AGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPV 274

Query: 226 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 285
           +VFD   +++     +    +  N GQ C +   I   K     L+E L   +       
Sbjct: 275 IVFDDA-DIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGA 332

Query: 286 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAPTLLLDVPRD 341
           P +   +L  + +  H  R+ K +++ K +G  K++ GGE+ K      APTLL    +D
Sbjct: 333 PDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQD 392

Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
             I+ +E+FGP++ +   D  E   +  N     LA+ ++T +     +    +  G   
Sbjct: 393 DAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTW 452

Query: 402 INDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           +N    H  + S +P GG + SG G     +  + ++  + V
Sbjct: 453 VNT---HFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  183 bits (466), Expect = 3e-52
 Identities = 113/367 (30%), Positives = 179/367 (48%), Gaps = 32/367 (8%)

Query: 115 IVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
           ++ EP GVV +I+PWNYP       V  A+AAG A +LKPSE+A  +   L ++  E   
Sbjct: 147 VLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKE--- 203

Query: 169 LSS------IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 220
                    + ++ G   E  A L      DK+ +TG+S     +M AAA+ + PV LEL
Sbjct: 204 --VGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLEL 261

Query: 221 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 279
           GGKSP VVF+   +L  A    I G +   NGQ C +   +I  +  A + L  +   ++
Sbjct: 262 GGKSPLVVFEDV-DLDKAAEWAIFGCFW-TNGQICSATSRLILHESIATEFLNRIVKWIK 319

Query: 280 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---IAPTL 334
           N    +PLE    L  +V+   + ++ K + + K  G  I+ GG R ++  +   I PT+
Sbjct: 320 NIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTI 379

Query: 335 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 394
           + DV  +  I  EE+FGP+L + T    E++ D+ N     L A + +N+ +  ++  + 
Sbjct: 380 ITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKA 439

Query: 395 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVR 454
             AG + +N +         P+GGV+ SG G   G++  D +   K V     I + P  
Sbjct: 440 FKAGIVWVNCS--QPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQY--ISEEPWG 495

Query: 455 -YPPYTK 460
            Y P  K
Sbjct: 496 WYQPPAK 502

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  181 bits (461), Expect = 2e-51
 Identities = 78/342 (22%), Positives = 152/342 (44%), Gaps = 19/342 (5%)

Query: 115 IVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
           I  +P G+V  I+PWNYP       +  AI  GN +V KPSE  P ++  LA+L+ + + 
Sbjct: 157 IRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILP 216

Query: 169 LSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP- 225
              + V+ G        L    K   +  TG+    + V+AAAAK +    LELGGK+P 
Sbjct: 217 EGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPV 276

Query: 226 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKN 285
           +V+    +L+     +    +  N GQ C +   I        KL+  L + +       
Sbjct: 277 IVYGDA-DLEAVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNL 334

Query: 286 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDKNK-LRIAPTLLLDVPRD 341
             +++ ++  +++     R++  ++        +I  GG    ++     PT++    ++
Sbjct: 335 DDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQE 394

Query: 342 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
             I+  E+FGP++ +      +D+    N     LA+ ++T +     +    +  G   
Sbjct: 395 DEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTW 454

Query: 402 INDTAVHLAVHS-LPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           IN    H  + + +P GG+++SG G     ++ + ++  + +
Sbjct: 455 INT---HFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHI 493

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  178 bits (455), Expect = 1e-50
 Identities = 69/347 (19%), Positives = 142/347 (40%), Gaps = 25/347 (7%)

Query: 116 VPEPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 169
              P G+V II+ +N+P  V       A+  GN  + K +      S  + K++ + ++ 
Sbjct: 154 QWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLED 213

Query: 170 SSI-----RVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 223
           + +      +  G     +A+  D++ + + +TG+++V + V     +     LLELGG 
Sbjct: 214 NKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGN 273

Query: 224 SP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 282
           +  + F+   +L +     +    G   GQ C +   +   +    +++  LK       
Sbjct: 274 NAIIAFEDA-DLSLVVPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIR 331

Query: 283 GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVP 339
             NP +       +      +     +++ K  G  +V+GG+  D+    + PT++  + 
Sbjct: 332 VGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLG 391

Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG- 398
            D+ I   E F P+L +      E+ F   N   + L++ +FT +  L + F      G 
Sbjct: 392 HDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKD--LGRIFRWLGPKGS 449

Query: 399 --GLV-INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
             G+V +N       +    FGG + +G G   G  ++  +  +   
Sbjct: 450 DCGIVNVNIPTSGAEIG-GAFGGEKHTGGGRESGSDAWKQYMRRSTC 495

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  178 bits (454), Expect = 2e-50
 Identities = 89/346 (25%), Positives = 169/346 (48%), Gaps = 23/346 (6%)

Query: 115 IVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
           IV EP GVV  I+PWNYP       +  A+A G +LV+KPSE+ P ++  + +L+ E + 
Sbjct: 166 IVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEE-VG 224

Query: 169 LSS--IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS 224
                I ++ GA +E   ++    + D + +TG     + +M  AA ++T + LELGGK+
Sbjct: 225 FPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKN 284

Query: 225 P-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG 283
           P ++FD   + ++A  + + G +  + GQ C +   I+       K  ++L + ++    
Sbjct: 285 PNIIFDDA-DFELAVDQALNGGYF-HAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKL 342

Query: 284 KNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-----IAPTLLL 336
            N  ++  ++  ++++ H  ++   +D  K  G  I  GG+R             PT++ 
Sbjct: 343 GNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVIT 402

Query: 337 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 396
           +      I+ EE+FGP++ +   +  +++  + N     LA  +F+ +    Q+    + 
Sbjct: 403 NCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLK 462

Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            G + IND   H      P+GG ++SG+G   GK   + +   K +
Sbjct: 463 LGTVWINDF--HPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHI 506

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  177 bits (452), Expect = 5e-50
 Identities = 108/348 (31%), Positives = 166/348 (47%), Gaps = 30/348 (8%)

Query: 115 IVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGE--- 165
           ++ EP GVV II+PWN+PF      V  AI +G  +VLKPSE    +S  LA+L  E   
Sbjct: 157 VLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216

Query: 166 ----YMDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLE 219
                       VV G       +L +    D + +TG+ RV   +   AA+ +  V LE
Sbjct: 217 PDGV------FNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLE 270

Query: 220 LGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL 278
           LGGK P +VF    +L  A   +  G +  N GQ CIS   ++  +     L+E L +  
Sbjct: 271 LGGKGPQIVFADA-DLDAAADGIAYGVYH-NAGQCCISGSRLLVQEGIRDALMERLLDIS 328

Query: 279 ENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK--LRIAPTL 334
                 +PL  +  +  +++  H  ++   +     SG +++ GGER   +  L  APT+
Sbjct: 329 RKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTV 388

Query: 335 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 394
              V  D  I  EEIFGP+L  LT    +++  + N+    L+A +++ N +   Q +  
Sbjct: 389 FAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRR 448

Query: 395 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           + AG   IN   V      LP GG ++SG+G   G++ FD +S  K V
Sbjct: 449 IRAGRCWINS--VIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  177 bits (451), Expect = 7e-50
 Identities = 104/347 (29%), Positives = 163/347 (46%), Gaps = 33/347 (9%)

Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGE------ 165
            P GV + I  WNYP  +       A+ AGNA+V KPSE  P  +  +A+++ E      
Sbjct: 149 VPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKG 208

Query: 166 -YMDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 222
                    V++G   +T  LL       K+  TG+    R V AAAA HL  V +ELGG
Sbjct: 209 L------FNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGG 261

Query: 223 KSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 281
           KSP +VFD   +++ A    ++G +  ++GQ C +   +   K    + LE+LK   E  
Sbjct: 262 KSPMIVFDDA-DIESAVGGAMLGNFY-SSGQVCSNGTRVFVQKKAKARFLENLKRRTEAM 319

Query: 282 YGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR----IAPTLL 335
              +PL+    L  +V+     ++   ++  K  G  ++ GG    N       + PT+ 
Sbjct: 320 ILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVF 379

Query: 336 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 395
            DV  D  I  EEIFGP++ +L  D  ++     N+    LA  +FT +     + V+ +
Sbjct: 380 ADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGL 439

Query: 396 SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            AG L IN    +L    +PFGG ++SG G  +   + + +S  K V
Sbjct: 440 EAGTLWIN--TYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  176 bits (448), Expect = 1e-49
 Identities = 80/347 (23%), Positives = 142/347 (40%), Gaps = 35/347 (10%)

Query: 118 EPFGVVLIISPWNYPF------FVGAIAAGNALVLKPSEVAPASSSLLAKL--------- 162
           +P GVV +  P+N+P        V A+ AGN +V KPSE+ P  + L  K          
Sbjct: 138 KPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAG 197

Query: 163 VGEYMDLSSIRVVEGAVAETSALLDQKW-DKICYTGNSRVARIVMA-AAAKHLTPVLLEL 220
           V        + +V+G      AL   +  D + +TG+SR   ++ +    +    + LE+
Sbjct: 198 V--------LNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEM 249

Query: 221 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNEL 278
           GG +P VV +   +L  A   +I   +  + GQ C     ++  +  +   LL  L    
Sbjct: 250 GGNNPLVVEEVA-DLDAAVYTIIQSAFI-SAGQRCTCARRLLVPQGAWGDALLARLVAVS 307

Query: 279 ENFY-GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTL 334
                G+   +    +  +++ +    L K  +     G + +    +       + P  
Sbjct: 308 ATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPG- 366

Query: 335 LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 394
           +LDV   +    EE FGPLL ++       +    N+    LAA L +++++  +QF+  
Sbjct: 367 ILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVE 426

Query: 395 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA 441
             AG +  N      A    PFGG+  SG       ++ D  ++  A
Sbjct: 427 SRAGIVNWNKQLTGAASS-APFGGIGASGNHRPSAYYAADYCAYPVA 472

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  175 bits (446), Expect = 3e-49
 Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 30/349 (8%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
            P G V II+PWN P       +  A+A GN +VLKP+E +P +++ LA+++ E  DL  
Sbjct: 161 VPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKE-ADLPP 219

Query: 172 --IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP-V 226
               +V+G   E  A L        +  TG +   +IVM  AA HL  +  ELGGKSP +
Sbjct: 220 GVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPAL 279

Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 286
           VF    +L+ A   ++   +   NG+ C +   ++  +      +  +          +P
Sbjct: 280 VFADA-DLERALDAVVFQIFS-FNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHP 337

Query: 287 LESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---------IAPTLL 335
           L+ + ++  +++  H  R+   ++  K  G +++ GGER K   R         + PT+ 
Sbjct: 338 LDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVF 397

Query: 336 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 395
           +       I  EEIFGP+L  +     E++    N     LAAY+FT + +   +    +
Sbjct: 398 VGEN-HMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALEL 456

Query: 396 SAGGLVIND-TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 443
            AG + +N     HL     PFGGV+ SG     G ++ D ++  K + 
Sbjct: 457 EAGMVYLNSHNVRHLPT---PFGGVKGSGDRREGGTYALDFYTDLKTIA 502

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  174 bits (443), Expect = 7e-49
 Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 36/359 (10%)

Query: 118 EPFGVVLIISPWNYPFFVG------AIAAGNALVLKPSEVAPASSSLLAKLVGE------ 165
           EP GV   I  WNYPF +       A+A GNA+V KPS + P +  +LA++  E      
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVG 213

Query: 166 -YMDLSSIRVVEGAVAETSALLD-QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGK 223
                  + VV+G     S L       K+ +TG+    + VM  +AK +  V LELGGK
Sbjct: 214 L------VNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGK 267

Query: 224 SP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 282
           SP ++F     L+ A R  +M  +    GQ C +   +   ++  P+ LE +    +   
Sbjct: 268 SPLLIFKDC-ELENAVRGALMANFL-TQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIV 325

Query: 283 GKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR-------IAPT 333
             +PL ++  +  +++     ++   +   K  G +++ GGE              ++P 
Sbjct: 326 VGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPC 385

Query: 334 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 393
           +L +   D   + EEIFGP++ +L  D  E+     N+ T  LA+ +FT +     +   
Sbjct: 386 VLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAA 445

Query: 394 TVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVP 452
            + AG   IN     ++   +PFGG + SG G  +G+ + D +S  K V+    +GDV 
Sbjct: 446 NLEAGTCYINTY--SISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVE--MGDVD 500

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  173 bits (441), Expect = 1e-48
 Identities = 95/347 (27%), Positives = 156/347 (44%), Gaps = 28/347 (8%)

Query: 115 IVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
              EP GV   I PWN+P       +G A++ GN +V+KP+E  P ++  +  L+ E   
Sbjct: 155 TRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKE--- 211

Query: 169 LSS------IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAK-HLTPVLLE 219
             +      + +V G      A +      DK+ +TG++ V +++  AA K +L  V LE
Sbjct: 212 --AGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLE 269

Query: 220 LGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL 278
           LGGKSP +VF    +L  A      G +  + GQ CI+   +   +    + +       
Sbjct: 270 LGGKSPCIVFADA-DLDNAVEFAHQGVFY-HQGQCCIAASRLFVEESIYDEFVRRSVERA 327

Query: 279 ENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLL 335
           + +   NPL         ++   + ++  L++  K  G K+  GG    NK   I PT+ 
Sbjct: 328 KKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVF 387

Query: 336 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 395
            DV  D  I  EEIFGP+  I+    ++D     N+    L+A +FTN+          +
Sbjct: 388 SDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSAL 447

Query: 396 SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            +G + +N     +     PFGG + SG G   G++ F  ++  K V
Sbjct: 448 QSGTVWVN--CYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  173 bits (441), Expect = 1e-48
 Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 28/347 (8%)

Query: 115 IVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
              EP GV   I PWN+P       +G A+A GN +V+K +E  P ++  +A L+ E   
Sbjct: 154 TRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKE--- 210

Query: 169 LSS------IRVVEGAVAET-SALLD-QKWDKICYTGNSRVARIVMAAAAK-HLTPVLLE 219
             +      + +V G      +A+   +  DK+ +TG++ + R++  AA   +L  V LE
Sbjct: 211 --AGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLE 268

Query: 220 LGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL 278
           LGGKSP ++     ++  A  +     +  N GQ   +       +D   + +E      
Sbjct: 269 LGGKSPNIIMSDA-DMDWAVEQAHFALFF-NQGQCSCAGSRTFVQEDIYDEFVERSVARA 326

Query: 279 ENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLL 335
           ++    NP +SK +    V+   F ++   ++  K  G K++ GG    ++   I PT+ 
Sbjct: 327 KSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVF 386

Query: 336 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 395
            DV     I  EEIFGP++ IL    IE+     N+ T  LAA +FT +        + +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446

Query: 396 SAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            AG + +N     +     PFGG + SG G   G++    ++  K V
Sbjct: 447 QAGTVWVN--CYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 491

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  171 bits (437), Expect = 3e-48
 Identities = 94/345 (27%), Positives = 158/345 (45%), Gaps = 30/345 (8%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLV-------G 164
              GV   I PWN+PFF     +  A+  GN +V+KPSE  P ++   AK+V       G
Sbjct: 141 RALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRG 200

Query: 165 EYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 222
                    +V G        L  + K   +  TG+      +MA AAK++T V LELGG
Sbjct: 201 ------VFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGG 254

Query: 223 KSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF 281
           K+P +V D   +L++A + ++  +   N+GQ C   + +   K    + +  L   ++  
Sbjct: 255 KAPAIVMDDA-DLELAVKAIVDSRVI-NSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAV 312

Query: 282 YGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLD 337
              NP E  D++   ++N+    R+ + +      G ++  GG+  +       PTLLLD
Sbjct: 313 QFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLD 372

Query: 338 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
           V ++  IM EE FGP+LP++  D +ED+  + N     L + ++T N  +  + ++ +  
Sbjct: 373 VRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKF 432

Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
           G   IN              G ++SG+G   GK     +   + V
Sbjct: 433 GETYINRENFEAMQ--GFHAGWRKSGIGGADGKHGLHEYLQTQVV 475

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  166 bits (424), Expect = 5e-46
 Identities = 88/350 (25%), Positives = 153/350 (43%), Gaps = 32/350 (9%)

Query: 115 IVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 168
              EP GV  I+ PWNYP           +AAGN +V+KP++V P ++   A+L  +   
Sbjct: 174 TKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLK--- 230

Query: 169 LSS------IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAK-HLTPVLLE 219
             +      + ++ G+ +     L       KI +TG++ V + +M + A  ++  V LE
Sbjct: 231 --AGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLE 288

Query: 220 LGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL 278
           LGGKSP ++F    +L  A +  +   +  N G+ CI+   +   +    + ++ +  E+
Sbjct: 289 LGGKSPLIIFADC-DLNKAVQMGMSSVFF-NKGENCIAAGRLFVEESIHNQFVQKVVEEV 346

Query: 279 ENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLL 335
           E     NPLE   +     +  H  +L +        G  +V GG +         PT+ 
Sbjct: 347 EKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVF 406

Query: 336 LDVPRDSLIMSEEIFGPLLPILT--VDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 393
            DV     I  EE FGP++ I       ++      N+    LA+ +FT +        +
Sbjct: 407 TDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSD 466

Query: 394 TVSAGGLVINDTAVHLAVH-SLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
            + AG + IN    +     + PFGG ++SG G   G+ + + +   K V
Sbjct: 467 KLQAGTVFINT---YNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  167 bits (426), Expect = 7e-45
 Identities = 71/334 (21%), Positives = 130/334 (38%), Gaps = 24/334 (7%)

Query: 113 AEIVPEPFGVVLIISPWNYPF--FVG----AIAAGNALVLKPSEVAPASSSLLAKLVGEY 166
                EP GV  +I+PWN+P    +G    AI  GN +V KPS +       L +L  E 
Sbjct: 660 NHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREA 719

Query: 167 -MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK------HLTPVL 217
            +         G  +     L        I +TG+      ++  AAK      ++  ++
Sbjct: 720 GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKII 779

Query: 218 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNE 277
            E+GGK+ ++ D   +L  A   ++   +G   GQ C +   +I       K +E L + 
Sbjct: 780 SEMGGKNAIIIDDDADLDEAVPHVLYSAFG-FQGQKCSACSRVIVLDAVYDKFIERLVSM 838

Query: 278 LENFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLR-IAPTLL 335
            +        +    +  + +      + +  +  K  G +++       +   +  T++
Sbjct: 839 AKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTII 898

Query: 336 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS---GTKPLAAYLFTNNKKLKQQFV 392
             +  +  I  EEIFGP+L ++     + + +  NS       L   +F+ + +   +  
Sbjct: 899 GGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFA---LTGGIFSRSPEHLAKAR 955

Query: 393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA 426
                G L IN       V   PFGG + SG+G 
Sbjct: 956 REFRVGNLYINRNNTGALVERQPFGGARMSGVGT 989

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  158 bits (401), Expect = 7e-43
 Identities = 62/451 (13%), Positives = 154/451 (34%), Gaps = 52/451 (11%)

Query: 41  RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSI---YEVALLKT--SIKSALKELKH 95
           R ++L  ++K+L  +  D       +      +S++     +  L     + ++L E+  
Sbjct: 68  RAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHA 127

Query: 96  WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPS 149
                    S     S+  ++    GV L I+ +N+P +        A+ +G  +++KP+
Sbjct: 128 LRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPA 187

Query: 150 EVAPASSSLLAKLVGEYMDL--SSIRVVEGAVAET-SALLDQKWDKICYTGNSRVARIVM 206
                 +  +   V +   L   ++ ++ G+ A     +     D + +TG++  A  + 
Sbjct: 188 TATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSF--DVVSFTGSADTAATLR 245

Query: 207 AAAAK--HLTPVLLELGGKSP-VVFD----SGINLKVACRRMIMGKWGCNNGQACISPDH 259
           A  A       + ++    +  ++            +  + ++       +GQ C +   
Sbjct: 246 AHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTV-KSGQKCTAIRR 304

Query: 260 IITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KI 317
               +     +LE+LK +L      NP  ++  +  +V+   +  +   +   +      
Sbjct: 305 AFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLA 364

Query: 318 VHGGERDKNKLR------IAPTLLL--DVPRDSLIMSEEIFGPLLPILTVDKIEDSFD-- 367
                             +AP L +  D    +L+   E+FGP+  +       D+    
Sbjct: 365 YDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALP 424

Query: 368 ------IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHS-------- 413
                 +   G   L A +++N+     +    ++     ++  +  +            
Sbjct: 425 EAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMP 484

Query: 414 -LPFGGVQESGMGA-YHGKFSFDVFSHKKAV 442
               GG   +G G    G  +   +  + A+
Sbjct: 485 MSLHGGPGRAGGGEELGGLRALAFYHRRSAI 515

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  156 bits (397), Expect = 2e-42
 Identities = 86/354 (24%), Positives = 154/354 (43%), Gaps = 45/354 (12%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKL--------- 162
            P GVV+ I+ WN+P       +G A+  GN +VLKP++  P +++ L ++         
Sbjct: 147 VPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDG 206

Query: 163 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 220
           V        + V+ G  +     L        I  TG++   + +   +A+++TPV+LEL
Sbjct: 207 V--------LNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLEL 258

Query: 221 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 279
           GGK+P VV D   +L  A    + G++  N GQ C   + +        + +      ++
Sbjct: 259 GGKAPMVVMDDA-DLDKAAEDALWGRFA-NCGQVCTCVERLYVHASVYDEFMAKFLPLVK 316

Query: 280 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRI-----AP 332
                +P+++   +    N      +  ++ +    G  +  GG+    +         P
Sbjct: 317 GLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEP 376

Query: 333 TLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 392
           T+L+DV +D++++ EE FGP+LPI+ V  +E + +  N     L+AY+ T +        
Sbjct: 377 TVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQS--FANIN- 433

Query: 393 ETVSAG---GLV-INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 442
               +    G V IN              G ++SG G   GKF  + +  KK V
Sbjct: 434 -QAISDLEVGEVYINRGMGEQHQ--GFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  150 bits (382), Expect = 2e-40
 Identities = 94/333 (28%), Positives = 153/333 (45%), Gaps = 41/333 (12%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKL--------- 162
           +P GV   I+PWN+P        G A+AAG  +VLKP+   P S+  LA+L         
Sbjct: 144 QPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAG 203

Query: 163 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 220
           V          VV G+       L  +    K+ +TG++ + R +M   AK +  V LEL
Sbjct: 204 V--------FNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLEL 255

Query: 221 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 279
           GG +P +VFD   +L  A    +  K+  N GQ C+  + +        +  E L+  + 
Sbjct: 256 GGNAPFIVFDDA-DLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAMS 313

Query: 280 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLL 336
             +  + L++   +  +++    A++ + + D    G ++V GG+  ++      PT+L+
Sbjct: 314 KLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILV 373

Query: 337 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 396
           DVP ++ +  EE FGPL P+       D     N     LAAY +  +  L + F   V 
Sbjct: 374 DVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARD--LSRVF--RVG 429

Query: 397 AG---GLV-INDTAVHLAVHSLPFGGVQESGMG 425
                G+V IN   +   V   PFGG++ SG+G
Sbjct: 430 EALEYGIVGINTGIISNEV--APFGGIKASGLG 460

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  150 bits (382), Expect = 3e-40
 Identities = 58/328 (17%), Positives = 118/328 (35%), Gaps = 37/328 (11%)

Query: 118 EPFGVVLIISPWNYPFFVG--------AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 169
              G V +    N+P            A+AAG  +++K     P +S ++A+ + + +  
Sbjct: 135 IALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQ 194

Query: 170 SSI-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPV--LLEL 220
             +      +++G        L    +   + +TG+    R +   A +   P+    EL
Sbjct: 195 EQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL 254

Query: 221 GGKSPV-VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNEL 278
           G  +P  +F S +  K       +       GQ C  P  +           +E+ ++ +
Sbjct: 255 GAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLI 314

Query: 279 ENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLL-- 336
                ++P  S  L+  +  ++ +++     DD +   +            +A  L +  
Sbjct: 315 R---QQSP--STLLTPGIRDSYQSQVVSRGSDDGI--DVTFSQAESP---CVASALFVTS 364

Query: 337 -DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK--QQFVE 393
            +  R      EEIFGP   I+  + + D   +       L A +    +      Q + 
Sbjct: 365 SENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIP 424

Query: 394 TVS--AGGLVINDTAVHLAV-HSLPFGG 418
            +   AG LV N     + V +++  GG
Sbjct: 425 RLEEIAGRLVFNGWPTGVEVGYAMVHGG 452

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  150 bits (381), Expect = 3e-40
 Identities = 96/333 (28%), Positives = 150/333 (45%), Gaps = 41/333 (12%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKL--------- 162
           EP GV   I+PWN+P       VG A+AAG  +V+KP+E  P S+  +A L         
Sbjct: 147 EPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKG 206

Query: 163 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 220
           V        + VV G        +  +    K+ +TG++ V R++MA +A  +  + LEL
Sbjct: 207 V--------LSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLEL 258

Query: 221 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 279
           GG +P +VFD   +L  A    I  K+  NNGQ C+  +     +       + L   + 
Sbjct: 259 GGNAPFIVFDDA-DLDAAVEGAIASKYR-NNGQTCVCTNRFFVHERVYDAFADKLAAAVS 316

Query: 280 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLL 336
                   ES   L  ++N     ++   + D    G  ++ GG+R         PT+L 
Sbjct: 317 KLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLT 376

Query: 337 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 396
            V  D  +  EE FGPL P+      E+   + N     LAAYL++ +  + + +   V+
Sbjct: 377 GVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRD--IGRVW--RVA 432

Query: 397 AG---GLV-INDTAVHLAVHSLPFGGVQESGMG 425
                G+V IN   +   V   PFGGV++SG+G
Sbjct: 433 EALEYGMVGINTGLISNEV--APFGGVKQSGLG 463

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  150 bits (381), Expect = 4e-40
 Identities = 90/363 (24%), Positives = 155/363 (42%), Gaps = 43/363 (11%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKL--------- 162
            P GV  +I PWN+P       +  A+AAG   V+KP+   P +      +         
Sbjct: 146 RPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDG 205

Query: 163 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 220
           +        + +V G  +    +L   +    + +TG++ V R ++   A+ +  + LEL
Sbjct: 206 M--------VNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALEL 257

Query: 221 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 279
           GG +P +VFD   +L+ A   +I  K+    GQ C+  + I   +  A    + L   + 
Sbjct: 258 GGNAPFIVFDDA-DLEAAADNLIANKFR-GGGQTCVCANRIFVHEKVADAFGQKLAERVN 315

Query: 280 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK--NKLRIAPTLL 335
                + +    D+  ++N   F ++ + L D    G  +V G +  +  + L   PT++
Sbjct: 316 KMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVV 375

Query: 336 LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV 395
             V R+     EE FGPL+P+      E+  D  N     LA+Y+FT +   ++     V
Sbjct: 376 QGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTAD--AERAQ--RV 431

Query: 396 SAG---GLV-INDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV 451
           +AG   G V  N           PFGG++ SG+G   G      F   + V  RGF  ++
Sbjct: 432 AAGLRFGHVGWNTGTGPTPE--APFGGMKASGIGREGGLEGLFEFVEAQTV-PRGFAENL 488

Query: 452 PVR 454
             +
Sbjct: 489 YFQ 491

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  149 bits (379), Expect = 6e-40
 Identities = 93/332 (28%), Positives = 151/332 (45%), Gaps = 41/332 (12%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKL--------- 162
           +P GV   I+PWN+P          A+AAG  ++++P+++ P ++  L  L         
Sbjct: 167 QPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAG 226

Query: 163 VGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLEL 220
           V        +++V G   E  A L  +    K+ +TG++ V R++MA  A  +  + LEL
Sbjct: 227 V--------LQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLEL 278

Query: 221 GGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELE 279
           GG +P +VFD   +L  A    ++ K+  N GQ C+  + I   +    K  E L  +++
Sbjct: 279 GGNAPFIVFDDA-DLDAAVDGAMVSKYR-NAGQTCVCANRIYVQRGVYDKFAEKLAAKVK 336

Query: 280 NFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLD 337
                N  E    +  ++      ++   ++D    G K++ GG+     L   P +L  
Sbjct: 337 ELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTG 395

Query: 338 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
           V  D L+  EE FGPL P+   D  E+     N     LAAY +T N    +     VS 
Sbjct: 396 VTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTEN--FSRAI--RVSE 451

Query: 398 G---GLV-INDTAVHLAVHSLPFGGVQESGMG 425
               G+V  N   +   V   PFGGV++SG+G
Sbjct: 452 ALEYGMVGHNTGLISNEV--APFGGVKQSGLG 481

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  145 bits (369), Expect = 1e-38
 Identities = 98/339 (28%), Positives = 157/339 (46%), Gaps = 49/339 (14%)

Query: 118 EPFGVVLIISPWNYPFF-----VG-AIAAGNALVLKPSEVAPASSSLLAKL--------- 162
           +P GV  +I+PWN+P       VG A+AAG  +V+KP+E  P S+  LA+L         
Sbjct: 145 QPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSG 204

Query: 163 VGEYMDLSSIRVVEGAVAETSA-----LLDQKWDKICYTGNSRVARIVMAAAAKHLTPVL 217
           V          V+  +             D    KI +TG++   +I++  AA  +  V 
Sbjct: 205 V--------YNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVS 256

Query: 218 LELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK----DYAPKLLE 272
           +ELGG +P +VFDS  N+  A    +  K+  N GQ C+  +  +  +     +     E
Sbjct: 257 MELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTCVCSNQFLVQRGIHDAFVKAFAE 314

Query: 273 SLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRI 330
           ++K  L    G    E      ++N     ++ K ++D    G  +V GG+R    K   
Sbjct: 315 AMKKNLRVGNGFE--EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFF 372

Query: 331 APTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 390
            PTLL +V +D L   EE FGPL P++  D  E++  I N+    LA Y ++ +    Q 
Sbjct: 373 EPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQD--PAQI 430

Query: 391 FVETVSAG---GLV-INDTAVHLAVHSLPFGGVQESGMG 425
           +   V+     G+V +N+  +       PFGGV++SG+G
Sbjct: 431 W--RVAEQLEVGMVGVNEGLISSVE--CPFGGVKQSGLG 465

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  145 bits (367), Expect = 2e-37
 Identities = 67/325 (20%), Positives = 130/325 (40%), Gaps = 22/325 (6%)

Query: 118 EPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MD 168
              GV + ISPWN+P          A+ AGN++V KP+E  P  +     L+ E      
Sbjct: 648 RGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKS 707

Query: 169 LSSIRVVEGAVAETSALL-DQKWDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKS 224
              +   +G +    AL        + +TG++ VAR +  A A     + P++ E GG +
Sbjct: 708 ALYLVTGDGRIGA--ALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGIN 765

Query: 225 PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGK 284
            ++ D+    +     ++   +  + GQ C +   +   +D A +++E +          
Sbjct: 766 AMIADATALPEQVADDVVTSAFR-SAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIG 824

Query: 285 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSL 343
           +P +    +  +++     RL   +   K   ++   G   +    +AP +         
Sbjct: 825 DPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCF-VAPHIFELTEAG-- 881

Query: 344 IMSEEIFGPLLPILTV--DKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 401
            ++EE+FGP+L ++    + +E     I      L   + +      +  ++ V  G + 
Sbjct: 882 QLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIY 941

Query: 402 INDTAVHLAVHSLPFGGVQESGMGA 426
           +N   +   V   PFGG   SG G 
Sbjct: 942 VNRNMIGAVVGVQPFGGNGLSGTGP 966

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score =  141 bits (358), Expect = 3e-37
 Identities = 54/337 (16%), Positives = 115/337 (34%), Gaps = 42/337 (12%)

Query: 116 VPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 169
           V  P GVV  + P   P        + +I AGN++V  P   A  +     +++ E  + 
Sbjct: 105 VAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEK 164

Query: 170 SS-----IRVVEGAVAE-TSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 222
           +      I  +     + T  L+       I  TG S + +    AA    TP +    G
Sbjct: 165 AGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVK----AAYSSGTPAIGVGPG 220

Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 282
             P   +   N+  A + ++  K   +NG  C S   ++  +     ++   +   +  +
Sbjct: 221 NGPAFIERSANIPRAVKHILDSK-TFDNGTICASEQSVVVERVNKEAVIAEFRK--QGAH 277

Query: 283 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRD 341
             +  E+  L + +   + +    ++         +         ++ IA          
Sbjct: 278 FLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEE---TKVGA 334

Query: 342 SLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAAYLFTNNKKLKQQFVETVSA 397
            +  S E   P+L   T +  +++     DI+          + + +K++ ++F      
Sbjct: 335 KIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPV 394

Query: 398 GGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSF 433
             L++N             GG+     GA  +   + 
Sbjct: 395 SRLLVNTPG--------ALGGI-----GATTNLVPAL 418

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score =  138 bits (349), Expect = 4e-36
 Identities = 58/314 (18%), Positives = 110/314 (35%), Gaps = 41/314 (13%)

Query: 116 VPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 169
           + EP G++  I P   P        + ++   N ++  P   A  S++  AKLV +    
Sbjct: 100 IAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVA 159

Query: 170 SS-----IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGG 222
           +      I  ++    E S  L        I  TG   + +    AA     P +    G
Sbjct: 160 AGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAG 215

Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 282
             PVV D   ++K A   ++M K   +NG  C S   +I   +   ++ E   +   +  
Sbjct: 216 NVPVVIDETADIKRAVASVLMSKTF-DNGVVCASEQAVIVVDEVYDEVKERFASHKAHV- 273

Query: 283 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH------GGERDKNKLRIAPTLLL 336
             +  ++  + +++  +            K+ G+         G +   +   +    L 
Sbjct: 274 -LSKTDADKVRKVLLIDGALN-------AKIVGQPATAIAEMAGVKVPADTKVLIGEGLG 325

Query: 337 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFD----IINSGTKPLAAYLFTNNKKLKQ--- 389
            V  D    + E   P L +   D  ED+      ++  G     + L+TN         
Sbjct: 326 KVSYDDAF-AHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIR 384

Query: 390 QFVETVSAGGLVIN 403
            F + +    ++IN
Sbjct: 385 YFGDKMKTARILIN 398

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score =  134 bits (340), Expect = 2e-34
 Identities = 58/344 (16%), Positives = 111/344 (32%), Gaps = 46/344 (13%)

Query: 115 IVPEPFGVVLIISPWNYPF--------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY 166
           +V  P G V +    N+P            A+AAG  +V+K     P +  ++A+ V   
Sbjct: 165 LVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAA 224

Query: 167 MDLSSI-----RVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPV--L 217
           +  + +      +++G   +    L        + +TG+    R +    A    P+   
Sbjct: 225 IRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFF 284

Query: 218 LELGGKSPVVFDSGINLKVAC---RRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLES 273
            ELG  +P+          A    +           GQ C +P   +  +   A +   +
Sbjct: 285 GELGSVNPMFLLPEALKARAETLGQGWAGSLTM-GAGQFCTNPGIAVVIEGADADRFTTA 343

Query: 274 LKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPT 333
               L     +  L        +   +    ++    + V  K +   E         P 
Sbjct: 344 AVEALAKVAPQTMLTDG-----IAKAYRDGQARFATRNAV--KPLLATESSGRDAS--PN 394

Query: 334 LLLDVPRDSL---IMSEEIFGPLLPILTVDKIEDSFDIINS---GTKPLAAYLFTNNKKL 387
           L        L    + EE+FGPL  ++ V    +  ++          L A +  +   L
Sbjct: 395 LFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQ---LTATIHMDAGDL 451

Query: 388 KQ----QFVETVSAGGLVIND--TAVHLAVHSLPFGGVQESGMG 425
           +     + V    AG +++N   T V +    +  G    S   
Sbjct: 452 ETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNF 495

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  134 bits (339), Expect = 2e-34
 Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 22/345 (6%)

Query: 118 EPFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
            P GVV  I+P+N+P       F  AIA GN  +LKPSE  P  +  L +L  +   L  
Sbjct: 140 YPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEK-AGLPK 198

Query: 172 --IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
               VV GA    + +L+    K I + G+  V   V    +++L  V    G K+  + 
Sbjct: 199 GVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIV 258

Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENF-YGKNPL 287
            +  NL+     ++   +G   G+ C++   +   +  A + +  L+ ++ +   G    
Sbjct: 259 LNDANLEDTVTNIVGAAFGSA-GERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLD 317

Query: 288 ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDK---NKLRIAPTLLLDVPRDSL 343
           +   L  ++  ++  R    ++     G ++V  G R+    +   + PT+  +V  +  
Sbjct: 318 DGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDG-RENVSDDGYFVGPTIFDNVTTEMT 376

Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 403
           I  +EIF P+L ++ V  ++++ +I N       A LFT+N    + F E + AG L IN
Sbjct: 377 IWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGIN 436

Query: 404 -DTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 445
                 +A     F G + S  G    +GK S D ++ KK V +R
Sbjct: 437 LGVPAPMAFFP--FSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  123 bits (312), Expect = 1e-30
 Identities = 94/349 (26%), Positives = 153/349 (43%), Gaps = 26/349 (7%)

Query: 118 EPFGVVLIISPWNYP------FFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 171
           +P G+   I+P+N+P       F  AIA GNA +LKPSE  P+    LA+L+ E   L +
Sbjct: 161 QPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIE-AGLPA 219

Query: 172 --IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 228
             + VV G      A+L       + + G++ +AR V   AA +        G K+ ++ 
Sbjct: 220 GILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMII 279

Query: 229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITT-KDYAPKLLESLKNELENF-YGKNP 286
               +L  A   +I   +G   G+ C++    +   ++ A +L++ L   +E+   G   
Sbjct: 280 MPDADLDQAANALIGAGYGSA-GERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338

Query: 287 LESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLDVP 339
            E  D+  +V      R+  L+D     G K+V  G RD      +N   I   L  DV 
Sbjct: 339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDG-RDFKLQGYENGHFIGGCLFDDVT 397

Query: 340 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 399
            D  I   EIFGP+L ++     E++  +           ++T +    + F   ++ G 
Sbjct: 398 PDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGM 457

Query: 400 LVIN-DTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSR 445
           + +N    V LA HS  FGG + S  G    HG  S   ++  K + SR
Sbjct: 458 VGVNVPIPVPLAYHS--FGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  121 bits (306), Expect = 8e-30
 Identities = 73/329 (22%), Positives = 134/329 (40%), Gaps = 25/329 (7%)

Query: 121 GVVLIISPWNYP-FFVG----AIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRV 174
           G V  ISP+N+              GN ++ KPS+ A  +S  + +++ E  +  + I+ 
Sbjct: 202 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 261

Query: 175 VEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPV 226
           V          +   +    I +TG+    + +    A      +    +  E GGK+  
Sbjct: 262 VPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFH 321

Query: 227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP 286
              S  ++       +   +    GQ C +   +   K   P++   L  E       +P
Sbjct: 322 FVHSSADVDSVVSGTLRSAFE-YGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDP 380

Query: 287 LE--SKDLSRIVNSNHFARLSKLLDDDKVSGKIVH--GGERDKNK-LRIAPTLLLDVPRD 341
            E      S ++++  FAR+ K L+  + S  +    GG+ +++    + P ++      
Sbjct: 381 AEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQ 440

Query: 342 SLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--S 396
             IM EEIFGP+L +     DK  ++  +++S T   L   +F  +K + Q+    +  +
Sbjct: 441 EPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNA 500

Query: 397 AGGLVINDTAVHLAVHSLPFGGVQESGMG 425
           AG   IND +    V   PFGG + SG  
Sbjct: 501 AGNFYINDKSTGSVVGQQPFGGARASGTN 529

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.9 bits (152), Expect = 2e-10
 Identities = 57/372 (15%), Positives = 104/372 (27%), Gaps = 126/372 (33%)

Query: 16  AEAASLFVKE-LRGTFASGKTKSYGWRVSQLKSLMK---MLNEREPDIVDALRQD---LD 68
            E    FV+E LR         +Y + +S +K+  +   M+     +  D L  D     
Sbjct: 76  EEMVQKFVEEVLR--------INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA 127

Query: 69  KPELESSIYEVALLK--TSIKSALKEL---------------KHWMTPEKAKTSITTFPS 111
           K       Y V+ L+    ++ AL EL               K W+  +           
Sbjct: 128 K-------YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCL-------- 172

Query: 112 SAEIVPE-PFGVVLIISPWNYPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLS 170
           S ++  +  F +      W        +   N     P  V      LL ++   +   S
Sbjct: 173 SYKVQCKMDFKIF-----W--------LNLKN--CNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 171 S-----IRVVEGAVAETSALLDQK------------WD-KI-------C----YTGNSRV 201
                    +    AE   LL  K             + K        C     T   +V
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV 277

Query: 202 ARIVMAAAAKHLTPVLLELG---GKSPVVFDSGINLKVAC-RRMIMGKWGCNNGQAC-IS 256
              + AA   H++     +     +   +    ++ +     R           +    +
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR-----------EVLTTN 326

Query: 257 P-----------DHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 305
           P           D + T  ++     + L   +E+    N LE  +  +      F RLS
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL--NVLEPAEYRK-----MFDRLS 379

Query: 306 KLLDDDKVSGKI 317
                  +   +
Sbjct: 380 VFPPSAHIPTIL 391

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.6 bits (146), Expect = 8e-10
 Identities = 69/451 (15%), Positives = 128/451 (28%), Gaps = 135/451 (29%)

Query: 23  VKELR--------GTFASGKT-------KSYG----------W----RVSQLKSLMKMLN 53
           + ELR        G   SGKT        SY           W      +  +++++ML 
Sbjct: 144 LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203

Query: 54  ----------EREPDIVDALRQDLD--KPEL----ESSIYEVALLKTSIKSALKELKHWM 97
                         D    ++  +   + EL    +S  YE  LL   +   ++  K W 
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL---VLLNVQNAKAW- 259

Query: 98  TPEKA-----KTSITT-FPSSAEIVPEPFGVVLIISPWNYPFFVGAIAAGNALVLKPSEV 151
               A     K  +TT F    + +       + +   +                 P E 
Sbjct: 260 ---NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL-------------TPDE- 302

Query: 152 APASSSLLAKLVG-EYMDLSSIRVVEG---AVAETSALLDQ---KWDKICYTGNSRVARI 204
                SLL K +     DL    V+      ++  +  +      WD   +    ++  I
Sbjct: 303 ---VKSLLLKYLDCRPQDLPR-EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358

Query: 205 VMAAAAKHLTPVLLELGGKSPVVF--DSGINLKVACR----------RMIMGKWGCNNGQ 252
            + ++   L P           VF   + I   +              +++ K   +   
Sbjct: 359 -IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK--LHK-Y 414

Query: 253 ACI---SPDHIITTKDYAPKLLESLKNE-------LENFYGKNPLESKDLSRIVNSN--- 299
           + +     +  I+      +L   L+NE       ++++      +S DL          
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474

Query: 300 -----H---------FARLSKL-LDDDKVSGKIVHGGERDKNKLRIAPTLL-LDVPRDSL 343
                H               + LD   +  KI H          I  TL  L   +  +
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534

Query: 344 IMSEEIFGPLLPILTVDKIEDSFDIINSGTK 374
             ++  +  L     V+ I D F +      
Sbjct: 535 CDNDPKYERL-----VNAILD-F-LPKIEEN 558

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.9 bits (126), Expect = 2e-07
 Identities = 64/385 (16%), Positives = 127/385 (32%), Gaps = 129/385 (33%)

Query: 58  DIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVP 117
           D+ D  +  L K E++     + + K ++   L+    W    K +  +  F        
Sbjct: 37  DVQDMPKSILSKEEID----HIIMSKDAVSGTLRLF--WTLLSKQEEMVQKF-------- 82

Query: 118 EPFGVVLIISPWNYPFFVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG 177
               V  ++   NY F +  I                          E    S       
Sbjct: 83  ----VEEVLRI-NYKFLMSPIKT------------------------EQRQPS------- 106

Query: 178 AVAETSALLDQKWDKICYTGNSR-----VARIVMA----AAAKHLTP---VLLE--LG-G 222
               T   ++Q+ D++ Y  N       V+R+        A   L P   VL++  LG G
Sbjct: 107 --MMTRMYIEQR-DRL-YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG 162

Query: 223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFY 282
           K+ V  D  ++ KV C+      W  N    C SP+ ++       ++L+ L  +++  +
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFW-LNLKN-CNSPETVL-------EMLQKLLYQIDPNW 213

Query: 283 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDS 342
                 S ++   ++S   A L +LL             +  +N L +    LL+V +++
Sbjct: 214 TSRSDHSSNIKLRIHSIQ-AELRRLLKS-----------KPYENCLLV----LLNV-QNA 256

Query: 343 LIMSEEIFGPLLPILTVDKIEDSFDI-----INSGTKPLAAYLFTNNKKLKQQFVETVSA 397
                             K  ++F++     + +  K +  +L  +        ++  S 
Sbjct: 257 ------------------KAWNAFNLSCKILLTTRFKQVTDFL--SAATTTHISLDHHSM 296

Query: 398 G-------GLVINDTAVHLAVHSLP 415
                    L++    +      LP
Sbjct: 297 TLTPDEVKSLLLK--YLDCRPQDLP 319

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	487
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	100.0
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	100.0
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	100.0
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	100.0
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	100.0
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	100.0
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	100.0
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	100.0
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	100.0
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	100.0
4gic_A	423	HDH, histidinol dehydrogenase; protein structure i	97.6
1kae_A	434	HDH, histidinol dehydrogenase; L-histidinol dehydr	96.19

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=4.5e-97  Score=772.57  Aligned_cols=436  Identities=24%  Similarity=0.342  Sum_probs=406.4

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      ++|.+++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||+.+++..|+..++
T Consensus        31 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~  110 (490)
T 2wme_A           31 NGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGA  110 (490)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999845799999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++...+.+.....    ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       111 ~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~  186 (490)
T 2wme_A          111 DVLEYYAGLVPAIEGEQI----PLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL  186 (490)
T ss_dssp             HHHHHHHHHGGGCCEEEE----EEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred             HHHHHHHhccccccCccc----cccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHH
Confidence            999999887765432211    11234467889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHH-HHhccccceeeecCCCCcEEEcCCCC
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~-~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      ++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.+++ .+++++||+++|+|||||+||++|||
T Consensus       187 ~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAd  266 (490)
T 2wme_A          187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDAD  266 (490)
T ss_dssp             HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSC
T ss_pred             HHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCcc
Confidence            999999998 99999999999 567899999997 999999999999998876 55667899999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      ++.|++.+++++| .|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++|+++.
T Consensus       267 l~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~  345 (490)
T 2wme_A          267 LDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK  345 (490)
T ss_dssp             HHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999998 899999999999999999999997


Q ss_pred             c-CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          313 V-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       313 ~-~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      . ++++++||...     .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus       346 ~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~  425 (490)
T 2wme_A          346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA  425 (490)
T ss_dssp             HTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred             hcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHH
Confidence            4 78999999753     25899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++++++++|.|+||++..  ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus       426 ~a~~~~~~l~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~  483 (490)
T 2wme_A          426 RAHRAIHRLEAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL  483 (490)
T ss_dssp             HHHHHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred             HHHHHHHHCCeeEEEEeCCCC--CCCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence            999999999999999998543  5688999999999999999999999999999999875

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=1.2e-96  Score=767.67  Aligned_cols=448  Identities=43%  Similarity=0.749  Sum_probs=410.9

Q ss_pred             ccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHH
Q 011397           11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL   90 (487)
Q Consensus        11 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~   90 (487)
                      ....+.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++...|+..+++.+++++
T Consensus        12 ~~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   91 (469)
T 3sza_A           12 PRGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI   91 (469)
T ss_dssp             ------CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence            45677889999999999999999999999999999999999999999999999999999999987569999999999999


Q ss_pred             HHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHh
Q 011397           91 KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVG  164 (487)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~  164 (487)
                      +.+..|..+..........+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.++++++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~  171 (469)
T 3sza_A           92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP  171 (469)
T ss_dssp             HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence            99988876543322222234467889999999999999999988      899999999999999999999999999999


Q ss_pred             hhcCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHH
Q 011397          165 EYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG  244 (487)
Q Consensus       165 ~alP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~  244 (487)
                      +++|+|++|+|+|+.+.+..|+.|++|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+|.|++.++++
T Consensus       172 ~alP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~  251 (469)
T 3sza_A          172 QYLDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG  251 (469)
T ss_dssp             HHSCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred             HhCCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHH
Confidence            99999999999998777888888899999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCcc
Q 011397          245 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER  323 (487)
Q Consensus       245 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~  323 (487)
                      +| +|+||.|+++++||||++++|+|+++|++++++++ |+|.+ ++++||+++..+++++.+++    +++++++||..
T Consensus       252 ~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~  325 (469)
T 3sza_A          252 KF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTG  325 (469)
T ss_dssp             HH-GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCE
T ss_pred             HH-hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCcc
Confidence            99 99999999999999999999999999999999984 87777 89999999999999999998    57899999987


Q ss_pred             CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEc
Q 011397          324 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN  403 (487)
Q Consensus       324 ~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN  403 (487)
                      +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||
T Consensus       326 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN  405 (469)
T 3sza_A          326 DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN  405 (469)
T ss_dssp             ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEES
T ss_pred             CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEe
Confidence            66799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCCCCC--CCccCCCCchhHHH
Q 011397          404 DTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD--VPVRYPPYTKGKLR  464 (487)
Q Consensus       404 ~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~--~~~~~~~~~~~~~~  464 (487)
                      ++..+...+.+||||+|.||+|+++|.+|+++|++.|+|+.++++.+  ..++||||++.|.+
T Consensus       406 ~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~~  468 (469)
T 3sza_A          406 DVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMTQ  468 (469)
T ss_dssp             CSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC----
T ss_pred             CCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCCCCccccc
Confidence            98766667899999999999999999999999999999999987765  56899999987765

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=3.3e-94  Score=751.35  Aligned_cols=434  Identities=21%  Similarity=0.327  Sum_probs=410.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus        13 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~   91 (484)
T 3ros_A           13 TNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCV   91 (484)
T ss_dssp             TTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999999 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+++|.......    ..+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        92 ~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~  167 (484)
T 3ros_A           92 SICNYYADHGPEMLKPTKLN----SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAA  167 (484)
T ss_dssp             HHHHHHHHHHHHHTSCEEEC----CTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHH
T ss_pred             HHHHHHHHHHHHhcCCeecc----CCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence            99999999999887554322    134578899999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChH-hHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~-~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++++++.++ +|+|++|+|+|+.+ .++ |+.|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       168 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl  246 (484)
T 3ros_A          168 LTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADP  246 (484)
T ss_dssp             HHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCH
T ss_pred             HHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCH
Confidence            999999999 99999999999654 466 99997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      |.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++|++++.
T Consensus       247 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~  325 (484)
T 3ros_A          247 QVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAID  325 (484)
T ss_dssp             HHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999998 8999999999999999999999875


Q ss_pred             -CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 -SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 -~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                       ++++++||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++
T Consensus       326 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~  405 (484)
T 3ros_A          326 AGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKV  405 (484)
T ss_dssp             TTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHH
T ss_pred             cCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHH
Confidence             6799999975 35799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++|+|+||++.  ...+.+||||+|.||+|+++|++|+++|++.|+|+.+.
T Consensus       406 ~~~l~aG~V~vN~~~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~  458 (484)
T 3ros_A          406 SAQIETGMTVINGRW--ITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT  458 (484)
T ss_dssp             HHHSCSSCCEETSCC--CCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred             HHhCccceEEECCCC--CCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence            999999999999954  35689999999999999999999999999999998875

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=5.3e-94  Score=754.47  Aligned_cols=439  Identities=27%  Similarity=0.429  Sum_probs=410.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh-----hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA-----SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE   78 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e   78 (487)
                      +++.+++++.++.+|+++++++|++||+     .|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus        32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~e  110 (503)
T 3iwj_A           32 TQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WD  110 (503)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HH
Confidence            4678899999999999999999999999     99999999999999999999999999999999999999999998 89


Q ss_pred             HHHHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCC
Q 011397           79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVA  152 (487)
Q Consensus        79 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~  152 (487)
                      +..+++.+++++..++++.............+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+
T Consensus       111 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~t  190 (503)
T 3iwj_A          111 IDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELA  190 (503)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred             HHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcc
Confidence            99999999999998887754332111111123467889999999999999999998      899999999999999999


Q ss_pred             hHHHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEc
Q 011397          153 PASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD  229 (487)
Q Consensus       153 ~~~~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~  229 (487)
                      |+++.++++++.++ +|+|++|+|+|+ .+.++.|+.|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||+
T Consensus       191 p~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~  270 (503)
T 3iwj_A          191 SLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVF  270 (503)
T ss_dssp             CHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEEC
T ss_pred             hHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEc
Confidence            99999999999998 999999999994 57889999997 9999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 011397          230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLL  308 (487)
Q Consensus       230 ~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i  308 (487)
                      +|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.+++
T Consensus       271 ~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i  349 (503)
T 3iwj_A          271 EDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFV  349 (503)
T ss_dssp             SSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999998 89999999999999999999


Q ss_pred             HHHHc-CCeEeeCCccC---CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 011397          309 DDDKV-SGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN  384 (487)
Q Consensus       309 ~~a~~-~~~~~~gg~~~---~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d  384 (487)
                      ++++. ++++++||...   .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus       350 ~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d  429 (503)
T 3iwj_A          350 SNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISND  429 (503)
T ss_dssp             HHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSC
T ss_pred             HHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCC
Confidence            99875 67999999764   468999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       385 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      .+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++|++.|+|+...
T Consensus       430 ~~~a~~~~~~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~  489 (503)
T 3iwj_A          430 LERCERVTKAFKAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYI  489 (503)
T ss_dssp             HHHHHHHHHHCCSSEEEESSSCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred             HHHHHHHHHhCCcceEEEcCCCC--CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeC
Confidence            99999999999999999998643  5688999999999999999999999999999998874

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=6.6e-94  Score=752.24  Aligned_cols=436  Identities=22%  Similarity=0.325  Sum_probs=410.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus        36 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~  114 (506)
T 3rh9_A           36 TGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAA  114 (506)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999999 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEee-eeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVP-EPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      +.++++++.++++...... .   ..+...++++ +|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus       115 ~~l~~~a~~~~~~~~~~~~-~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~  190 (506)
T 3rh9_A          115 GFFDYCAKHISALDSHTIP-E---KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTM  190 (506)
T ss_dssp             HHHHHHHHHGGGGCCEECS-C---CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred             HHHHHHHHHHHHhcCcccc-c---CCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHH
Confidence            9999999999887543211 1   1234677888 99999999999999998      8999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      .++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+++|+.|++.+++++||+++|+|||||+||++|||
T Consensus       191 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dAD  270 (506)
T 3rh9_A          191 IAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDAD  270 (506)
T ss_dssp             HHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSC
T ss_pred             HHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCC
Confidence            9999999999 99999999999 557899999997 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      +|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.+++++++
T Consensus       271 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~  349 (506)
T 3rh9_A          271 LEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDAL  349 (506)
T ss_dssp             HHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999998 899999999999999999999997


Q ss_pred             c-CCeEeeCCcc-CC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          313 V-SGKIVHGGER-DK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       313 ~-~~~~~~gg~~-~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                      . ++++++||.. +. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++
T Consensus       350 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~  429 (506)
T 3rh9_A          350 DKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQ  429 (506)
T ss_dssp             HTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHH
T ss_pred             HCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence            5 6799999975 23 6899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCC
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF  447 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~  447 (487)
                      ++++++++|+|+||+++.  ..+.+||||+|.||+|+++|++|+++|++.|+|+.+..
T Consensus       430 ~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~  485 (506)
T 3rh9_A          430 RVAAGLRFGHVGWNTGTG--PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA  485 (506)
T ss_dssp             HHHHHCCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred             HHHHhCCcceEEEcCCCC--CCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence            999999999999999765  35789999999999999999999999999999988764

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=4.5e-94  Score=752.84  Aligned_cols=436  Identities=19%  Similarity=0.323  Sum_probs=408.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++...|+..++
T Consensus        49 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~  128 (498)
T 4f3x_A           49 TGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAII  128 (498)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999338999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.++++......   ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       129 ~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~  205 (498)
T 4f3x_A          129 DCWRFFAGAVRNLHAPAAG---EYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTAL  205 (498)
T ss_dssp             HHHHHHHHHTTCCEEECBE---EEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred             HHHHHHHHHHHHhcCcccc---CCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHH
Confidence            9999999887765322111   11123467889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      ++++++.+++|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus       206 ~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~  285 (498)
T 4f3x_A          206 KLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLE  285 (498)
T ss_dssp             HHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHH
T ss_pred             HHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHH
Confidence            99999999999999999999 567899999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||+++..+++++.++++++.+ 
T Consensus       286 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~  364 (498)
T 4f3x_A          286 AVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQ  364 (498)
T ss_dssp             HHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHC
Confidence            99999999999 99999999999999999999999999999999999999988 8999999999999999999999875 


Q ss_pred             CC-eEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 SG-KIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 ~~-~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      ++ ++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++
T Consensus       365 Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~  444 (498)
T 4f3x_A          365 KHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRA  444 (498)
T ss_dssp             TTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred             CCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence            67 899999753 4789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++|+|+||+++.+  .+.+||||+|.||+|+++|.+|+++|++.|+|+..
T Consensus       445 a~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~  496 (498)
T 4f3x_A          445 ASRLQYGCTWINTHFML--TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN  496 (498)
T ss_dssp             HHHCCSSEEEESCCSCC--CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred             HHhCCcceEEEcCCCCC--CCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence            99999999999997654  48999999999999999999999999999999875

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=100.00  E-value=2.3e-93  Score=742.37  Aligned_cols=437  Identities=33%  Similarity=0.588  Sum_probs=401.9

Q ss_pred             CccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            2 GSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         2 ~~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +.++|++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus        13 ~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~   92 (457)
T 3lns_A           13 GHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGA   92 (457)
T ss_dssp             ----------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHH
T ss_pred             CCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999999999999999999999999998569999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.++++++.+++|..+..........+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus        93 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t  172 (457)
T 3lns_A           93 VLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPET  172 (457)
T ss_dssp             HHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHH
T ss_pred             HHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence            99999999999998876543322222234577889999999999999999998      899999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          156 SSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       156 ~~~l~~~l~~alP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      +.++++++.+++|+|++|+|+|+.+.+..|+++++|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus       173 ~~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~  252 (457)
T 3lns_A          173 SAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLD  252 (457)
T ss_dssp             HHHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHH
T ss_pred             HHHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHH
Confidence            99999999999999999999998888999998669999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCC
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG  315 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~  315 (487)
                      .|++.+++++| +|+||.|+++++||||++++|+|+++|++++++++   |.+. ++||++++.+++++.++++++  ++
T Consensus       253 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~~a--~~  325 (457)
T 3lns_A          253 QTVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLEAT--QG  325 (457)
T ss_dssp             HHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHHHC--CS
T ss_pred             HHHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHHhc--CC
Confidence            99999999999 99999999999999999999999999999999988   6666 999999999999999999984  47


Q ss_pred             eEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHHHHh
Q 011397          316 KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVET  394 (487)
Q Consensus       316 ~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~v~t~d~~~~~~~~~~  394 (487)
                      ++++||..+++|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.+.+++++++
T Consensus       326 ~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~  405 (457)
T 3lns_A          326 QVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQ  405 (457)
T ss_dssp             EEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHT
T ss_pred             eEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHh
Confidence            99999986667999999999999999999999999999999999999999999999 99999999999999999999999


Q ss_pred             cceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          395 VSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       395 ~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +++|+|+||+++.+...+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus       406 l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~  456 (457)
T 3lns_A          406 IQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV  456 (457)
T ss_dssp             SCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred             CCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence            999999999987655678999999999999999999999999999999764

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=1.3e-93  Score=752.23  Aligned_cols=436  Identities=22%  Similarity=0.367  Sum_probs=410.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHh--hhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +++.+++++.++.+|+++|+++|++||  +.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..
T Consensus        57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~  135 (520)
T 3ed6_A           57 NQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDD  135 (520)
T ss_dssp             TTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHH
Confidence            467889999999999999999999999  899999999999999999999999999999999999999999999 79999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.+++++..++.+..... .  ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|++
T Consensus       136 ~~~~~~~~a~~~~~~~g~~~-~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t  212 (520)
T 3ed6_A          136 IHNVFMYFAGLADKDGGEMI-D--SPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLT  212 (520)
T ss_dssp             HHHHHHHHHHHTTSCCEEEE-C--CSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHH
T ss_pred             HHHHHHHHHHHHHHhcCeec-c--cCCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHH
Confidence            99999999988776543211 1  11123467889999999999999999998      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      +.++++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus       213 ~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dA  292 (520)
T 3ed6_A          213 TIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDA  292 (520)
T ss_dssp             HHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTS
T ss_pred             HHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCC
Confidence            99999999999 99999999999 568899999997 9999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |+|.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.++++++
T Consensus       293 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a  371 (520)
T 3ed6_A          293 DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVA  371 (520)
T ss_dssp             CHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999998 89999999999999999999998


Q ss_pred             Hc-CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCH
Q 011397          312 KV-SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK  385 (487)
Q Consensus       312 ~~-~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~  385 (487)
                      +. ++++++||...     .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus       372 ~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~  451 (520)
T 3ed6_A          372 KAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDI  451 (520)
T ss_dssp             HHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCH
T ss_pred             HhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence            75 67999999764     4689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       386 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++++++|+|+||+++.+  .+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus       452 ~~a~~~a~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~  510 (520)
T 3ed6_A          452 GKAQRVANKLKLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT  510 (520)
T ss_dssp             HHHHHHHHHSCCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred             HHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence            99999999999999999997653  588999999999999999999999999999998875

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=5e-94  Score=750.62  Aligned_cols=435  Identities=24%  Similarity=0.363  Sum_probs=406.4

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus        37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  115 (484)
T 3ifg_A           37 TGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAA  115 (484)
T ss_dssp             TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++....+......   .....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       116 ~~l~~~a~~~~~~~g~~~---~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~  192 (484)
T 3ifg_A          116 SFIEWFAEEGKRVAGDTL---PTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSAL  192 (484)
T ss_dssp             HHHHHHHHHHTTCCEEEE---CCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred             HHHHHHHHHHHhhcCccc---cccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence            999999887665322111   111123467889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .+++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       193 ~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl  272 (484)
T 3ifg_A          193 AMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADL  272 (484)
T ss_dssp             HHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred             HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCH
Confidence            999999998 99999999999 457899999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      |.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||+++..+++++.++++++..
T Consensus       273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~  351 (484)
T 3ifg_A          273 DAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALA  351 (484)
T ss_dssp             HHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999998 8999999999999999999999875


Q ss_pred             -CCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 -SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 -~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                       ++++++||...+ +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus       352 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~  431 (484)
T 3ifg_A          352 KGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRV  431 (484)
T ss_dssp             TTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHH
T ss_pred             CCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence             679999997643 699999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++|+|+||++.  ...+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus       432 ~~~l~aG~v~iN~~~--~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~  483 (484)
T 3ifg_A          432 AEALEYGMVGINTGL--ISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA  483 (484)
T ss_dssp             HHHCCCSEEEESCSC--CCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred             HHhCCcceEEEcCCC--CCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence            999999999999854  3568999999999999999999999999999998753

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=7.1e-94  Score=751.64  Aligned_cols=435  Identities=23%  Similarity=0.378  Sum_probs=406.9

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus        57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~  135 (504)
T 3ek1_A           57 DGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAA  135 (504)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++.....+.....   .....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       136 ~~~~~~a~~~~~~~g~~~---~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~  212 (504)
T 3ek1_A          136 SFIEWFAEEAKRVYGDTI---PAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL  212 (504)
T ss_dssp             HHHHHHHHHHTTCCEEEE---CCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred             HHHHHHHHHHHHhcCccc---ccccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence            999999887655422111   111122467889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       213 ~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl  292 (504)
T 3ek1_A          213 ALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADL  292 (504)
T ss_dssp             HHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCH
T ss_pred             HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCH
Confidence            999999998 99999999998 457899999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      |.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||+++..+++++.++++++..
T Consensus       293 ~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~  371 (504)
T 3ek1_A          293 DAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVS  371 (504)
T ss_dssp             HHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999998 8999999999999999999999875


Q ss_pred             -CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397          314 -SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV  392 (487)
Q Consensus       314 -~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~  392 (487)
                       ++++++||.. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus       372 ~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a  450 (504)
T 3ek1_A          372 KGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVS  450 (504)
T ss_dssp             TTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred             CCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence             6799999975 46899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++|+|+||++.  ...+.+||||+|.||+|+++|.+|+++|++.|+|+...
T Consensus       451 ~~l~aG~V~vN~~~--~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~  502 (504)
T 3ek1_A          451 EALEYGMVGHNTGL--ISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY  502 (504)
T ss_dssp             HHSCCSEEEESCSC--CCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred             HhCCcCeEEECCCC--CCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence            99999999999865  35688999999999999999999999999999998764

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=3.5e-93  Score=751.99  Aligned_cols=437  Identities=22%  Similarity=0.351  Sum_probs=410.5

Q ss_pred             chhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHH
Q 011397            5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT   84 (487)
Q Consensus         5 ~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~   84 (487)
                      ++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+++
T Consensus        62 ~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~  140 (538)
T 3qan_A           62 DQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAID  140 (538)
T ss_dssp             TCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHH
T ss_pred             CcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999 79999999


Q ss_pred             HHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHH
Q 011397           85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSL  158 (487)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~  158 (487)
                      .++++++.+..+..++....   ..+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.+
T Consensus       141 ~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~  217 (538)
T 3qan_A          141 FLEYYARQMIELNRGKEILS---RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK  217 (538)
T ss_dssp             HHHHHHHHHHHHHTCBCCCC---CTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHH
T ss_pred             HHHHHHHHHHHhcCCeeecc---cCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHH
Confidence            99999998666655443221   123467889999999999999999988      899999999999999999999999


Q ss_pred             HHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcc------ccceeeecCCCCcEEEc
Q 011397          159 LAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH------LTPVLLELGGKSPVVFD  229 (487)
Q Consensus       159 l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~------~~p~~~e~gG~~p~iV~  229 (487)
                      +++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.++++      +||+++|+|||||+||+
T Consensus       218 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~  297 (538)
T 3qan_A          218 FVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVD  297 (538)
T ss_dssp             HHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEEC
T ss_pred             HHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEEC
Confidence            99999998 99999999999 567899999997 99999999999999999999988      99999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHH
Q 011397          230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLL  308 (487)
Q Consensus       230 ~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i  308 (487)
                      +|||+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+.+++.+++
T Consensus       298 ~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i  376 (538)
T 3qan_A          298 RDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYI  376 (538)
T ss_dssp             TTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999998 89999999999999999999


Q ss_pred             HHHHcCCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          309 DDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       309 ~~a~~~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      +++...|++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus       377 ~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~  456 (538)
T 3qan_A          377 EIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAH  456 (538)
T ss_dssp             HHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHH
T ss_pred             HHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHH
Confidence            99876449999998654 68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEeC
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++|++.|+|..+.
T Consensus       457 a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~  516 (538)
T 3qan_A          457 IEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY  516 (538)
T ss_dssp             HHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred             HHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence            99999999999999995433444789999999999999 999999999999999998875

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=5.5e-93  Score=746.15  Aligned_cols=436  Identities=25%  Similarity=0.375  Sum_probs=409.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus        45 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~  123 (503)
T 1a4s_A           45 TGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAW  123 (503)
T ss_dssp             TCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999997 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.++++.. +....   ..+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       124 ~~~~~~a~~~~~~~g-~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~  199 (503)
T 1a4s_A          124 QCIEYYAGLAPTLSG-QHIQL---PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV  199 (503)
T ss_dssp             HHHHHHHHHGGGCCE-EEEEC---GGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred             HHHHHHHHHHHHhcC-CcccC---CCCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence            999999998887653 21111   122356889999999999999999988      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      ++++++.++ +|+|++|+|+|+.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus       200 ~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~  279 (503)
T 1a4s_A          200 ILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELE  279 (503)
T ss_dssp             HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHH
T ss_pred             HHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHH
Confidence            999999998 99999999999437889999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++.. 
T Consensus       280 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~  358 (503)
T 1a4s_A          280 NAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE  358 (503)
T ss_dssp             HHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence            99999999999 99999999999999999999999999999999999999999 8999999999999999999999864 


Q ss_pred             CCeEeeCCccC-------CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          314 SGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       314 ~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      ++++++||...       ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus       359 Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~  438 (503)
T 1a4s_A          359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS  438 (503)
T ss_dssp             TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred             CCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence            77999999764       35899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCC
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF  447 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~  447 (487)
                      .++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+..
T Consensus       439 ~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~  497 (503)
T 1a4s_A          439 RAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMG  497 (503)
T ss_dssp             HHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCS
T ss_pred             HHHHHHHHCceeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEccC
Confidence            999999999999999999764  46789999999999999999999999999999988653

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=5.1e-93  Score=744.29  Aligned_cols=435  Identities=23%  Similarity=0.354  Sum_probs=407.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHH-HHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIY-EVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~-ev~~~   82 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. . |+..+
T Consensus        47 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~~Ev~~~  125 (495)
T 1wnd_A           47 TGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAF-NDEIPAI  125 (495)
T ss_dssp             TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HTHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467789999999999999999999999999999999999999999999999999999999999999999998 6 99999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.++++++.++++.... ...  ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus       126 ~~~~~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~  202 (495)
T 1wnd_A          126 VDVFRFFAGAARCLNGLA-AGE--YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA  202 (495)
T ss_dssp             HHHHHHHHHHTTCCEEEC-BEE--EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH
T ss_pred             HHHHHHHHHHHHHhcCcc-ccC--CCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHH
Confidence            999999998887764321 111  1112256789999999999999999987      8999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          157 SLLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       157 ~~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      .++++++.+++|+|++|+|+| +.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       203 ~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl  282 (495)
T 1wnd_A          203 LKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADI  282 (495)
T ss_dssp             HHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred             HHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCH
Confidence            999999999999999999999 667899999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++.+
T Consensus       283 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~  361 (495)
T 1wnd_A          283 EAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKA  361 (495)
T ss_dssp             HHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHh
Confidence            999999999999 99999999999999999999999999999999999999999 8999999999999999999999875


Q ss_pred             -C-CeEeeCCc-cCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 011397          314 -S-GKIVHGGE-RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ  390 (487)
Q Consensus       314 -~-~~~~~gg~-~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~  390 (487)
                       + +++++||. .++.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++
T Consensus       362 ~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~  441 (495)
T 1wnd_A          362 TGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR  441 (495)
T ss_dssp             TSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence             5 79999997 54468999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          391 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       391 ~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++|++.|+|+..
T Consensus       442 ~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~  494 (495)
T 1wnd_A          442 VSARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK  494 (495)
T ss_dssp             HHHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHHhCCcceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence            99999999999998653  458899999999999999999999999999998763

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=2.5e-93  Score=749.75  Aligned_cols=438  Identities=21%  Similarity=0.317  Sum_probs=407.2

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +++.+++++.++.+|+++|+++|++||+  .|+.++.++|.++|++++++|++++++|++++++|+|||..+++..|+..
T Consensus        61 tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~  140 (517)
T 2o2p_A           61 DGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGM  140 (517)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            4678899999999999999999999999  99999999999999999999999999999999999999999986579999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCC-cceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPS-SAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      +++.++++++.++++.... ........+. ..+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+
T Consensus       141 ~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~  219 (517)
T 2o2p_A          141 SIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL  219 (517)
T ss_dssp             HHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred             HHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHH
Confidence            9999999999887765322 1110000122 46789999999999999999998      89999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh-ccccceeeecCCCCcEEEcC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS  230 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~-~~~~p~~~e~gG~~p~iV~~  230 (487)
                      ++.++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus       220 ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~  299 (517)
T 2o2p_A          220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA  299 (517)
T ss_dssp             HHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECT
T ss_pred             HHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECC
Confidence            999999999998 99999999999 557899999997 999999999999999999999 89999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      |||++.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++
T Consensus       300 dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~  378 (517)
T 2o2p_A          300 DCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQ  378 (517)
T ss_dssp             TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999988 899999999999999999999


Q ss_pred             HHHc-CCeEeeCCccCC-CCceeecEEEecCCCCCcccccccccceeeeeeeCC--HHHHHHHHhcCCCCceEEEecCCH
Q 011397          310 DDKV-SGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNK  385 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~~-~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~  385 (487)
                      ++.+ ++++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|  ++|||+++|+++|||+++|||+|.
T Consensus       379 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~  458 (517)
T 2o2p_A          379 RGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDI  458 (517)
T ss_dssp             HHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBH
T ss_pred             HHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCH
Confidence            9875 679999997643 689999999999999999999999999999999999  999999999999999999999999


Q ss_pred             HHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          386 KLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       386 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|+..
T Consensus       459 ~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~  516 (517)
T 2o2p_A          459 NKALYVSDKLQAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE  516 (517)
T ss_dssp             HHHHHHHHHCCSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHHHHHHHhcCEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence            9999999999999999998643  467899999999999999999999999999999764

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.4e-93  Score=749.62  Aligned_cols=436  Identities=26%  Similarity=0.368  Sum_probs=410.6

Q ss_pred             chhhccccCCCHHHHHHHHHHHHHHh--hhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            5 EETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         5 ~~~~~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +|.+++++.++.+|+++++++|++||  +.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus        49 g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~  127 (528)
T 3u4j_A           49 GEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFC  127 (528)
T ss_dssp             TCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred             CcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence            67899999999999999999999999  889999999999999999999999999999999999999999996 999999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      ++.++++++.++++... ....  ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++
T Consensus       128 ~~~l~~~a~~~~~~~~~-~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~  204 (528)
T 3u4j_A          128 ADLWSYAAGQARALEGQ-THNN--IGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTS  204 (528)
T ss_dssp             HHHHHHHHHHHTTCCEE-EECC--SCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH
T ss_pred             HHHHHHHHHHHHHhcCe-eecc--CCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHH
Confidence            99999999988876522 1111  1123467889999999999999999998      8999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      .++++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus       205 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dAD  284 (528)
T 3u4j_A          205 IRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADAD  284 (528)
T ss_dssp             HHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSC
T ss_pred             HHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCC
Confidence            9999999999 99999999999 678899999997 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      +|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.+++++++
T Consensus       285 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~  363 (528)
T 3u4j_A          285 LDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGI  363 (528)
T ss_dssp             HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999998 899999999999999999999987


Q ss_pred             c-CCeEeeCCccCC--CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          313 V-SGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       313 ~-~~~~~~gg~~~~--~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                      . ++++++||....  +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus       364 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~  443 (528)
T 3u4j_A          364 TSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETAL  443 (528)
T ss_dssp             HTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred             HCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Confidence            5 679999997644  6899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCC
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF  447 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~  447 (487)
                      ++++++++|+|+||+++.  ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+..
T Consensus       444 ~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~  499 (528)
T 3u4j_A          444 QTIRRIRAGRCWINSVID--GTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG  499 (528)
T ss_dssp             HHHHHSCCSEEEESCCSC--CCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred             HHHHhCCeeEEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence            999999999999999754  46899999999999999999999999999999988753

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=1.4e-92  Score=741.43  Aligned_cols=431  Identities=23%  Similarity=0.371  Sum_probs=403.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++..|+..++
T Consensus        50 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~  129 (497)
T 3i44_A           50 TEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGS  129 (497)
T ss_dssp             TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999756999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEe-eeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIV-PEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS  156 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~  156 (487)
                      +.++++++.+..+......     ..+...+++ ++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++
T Consensus       130 ~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~  204 (497)
T 3i44_A          130 SHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSA  204 (497)
T ss_dssp             HHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHH
T ss_pred             HHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHH
Confidence            9999999888765432111     012346777 999999999999999988      8999999999999999999999


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      .++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus       205 ~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD  284 (497)
T 3i44_A          205 MLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD  284 (497)
T ss_dssp             HHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC
T ss_pred             HHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh
Confidence            9999999999 99999999999 567899999997 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                       +.|++.+++++| +|+||.|++++|||||+++||+|+++|+++++++++|||.+ ++++||++++.+++++.++|++++
T Consensus       285 -~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~  362 (497)
T 3i44_A          285 -IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGI  362 (497)
T ss_dssp             -TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHH
Confidence             999999999999 99999999999999999999999999999999999999998 899999999999999999999986


Q ss_pred             c-CCeEeeCCc-cCC---CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          313 V-SGKIVHGGE-RDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       313 ~-~~~~~~gg~-~~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      . ++++++||. ...   .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus       363 ~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~  442 (497)
T 3i44_A          363 DEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSK  442 (497)
T ss_dssp             HTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred             HCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHH
Confidence            5 679999994 322   68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      ++++++++++|+|+||.   ....+.+||||+|.||+|+++|.+++++|++.|+|+.
T Consensus       443 a~~~a~~l~aG~V~iN~---~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~  496 (497)
T 3i44_A          443 CRRIAAQVRSGMVEVNG---HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAISY  496 (497)
T ss_dssp             HHHHHHHSCCSEEEETT---CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEESC
T ss_pred             HHHHHHhCCcCeEEECC---CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEEe
Confidence            99999999999999995   2346889999999999999999999999999999853

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=3.1e-93  Score=747.64  Aligned_cols=436  Identities=22%  Similarity=0.335  Sum_probs=408.4

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++
T Consensus        37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~  115 (497)
T 3k2w_A           37 TGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTA  115 (497)
T ss_dssp             SCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.++++......   ....+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       116 ~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  192 (497)
T 3k2w_A          116 TFIDYGCDNALTIEGDILP---SDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT  192 (497)
T ss_dssp             HHHHHHHHTTTTCCEEEEE---CSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred             HHHHHHHHHHHHhcCcccc---cCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence            9999999888776533211   11223467889999999999999999988      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       193 ~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl  272 (497)
T 3k2w_A          193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADL  272 (497)
T ss_dssp             HHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCH
T ss_pred             HHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCH
Confidence            999999998 99999999999 567899999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.+++++++.
T Consensus       273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~  351 (497)
T 3k2w_A          273 DKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIK  351 (497)
T ss_dssp             HHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999998 8999999999999999999999864


Q ss_pred             -CCeEeeCCcc--C-C--CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          314 -SGKIVHGGER--D-K--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       314 -~~~~~~gg~~--~-~--~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                       ++++++||..  . .  +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus       352 ~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~  431 (497)
T 3k2w_A          352 QGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFAN  431 (497)
T ss_dssp             HHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHH
T ss_pred             CCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Confidence             7899999973  2 2  68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++++|+|+||+++.+  .+.+||||+|.||+|+++|.+|+++|++.|+|..+.
T Consensus       432 a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~  488 (497)
T 3k2w_A          432 INQAISDLEVGEVYINRGMGE--QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE  488 (497)
T ss_dssp             HHHHHHHCCSSEEEESCCSCC--CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred             HHHHHHhCCeeEEEEcCCCCC--CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence            999999999999999998754  488999999999999999999999999999998775

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.4e-93  Score=749.83  Aligned_cols=440  Identities=26%  Similarity=0.344  Sum_probs=406.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++   |+..++
T Consensus        39 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~  115 (517)
T 3r31_A           39 TGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPT  115 (517)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999886   999999


Q ss_pred             HHHHHHHHHHhh---hhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           84 TSIKSALKELKH---WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        84 ~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      +.++++++..+.   +..+.....   ..+. .+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.
T Consensus       116 ~~~~~~a~~~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~  191 (517)
T 3r31_A          116 SGADAFEFFGGIAPSALNGDYIPL---GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL  191 (517)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEC---SSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCS
T ss_pred             HHHHHHHHHhhhccccccCccccc---CCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHH
Confidence            999999988776   333332211   1223 7889999999999999999998      89999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      ++.++++++.++ +|+|+||+|+|+.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus       192 t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dA  271 (517)
T 3r31_A          192 GALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDA  271 (517)
T ss_dssp             HHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTS
T ss_pred             HHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCC
Confidence            999999999999 99999999999778899999997 9999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |+|.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++|+++
T Consensus       272 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a  350 (517)
T 3r31_A          272 DIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKG  350 (517)
T ss_dssp             CHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999998 89999999999999999999999


Q ss_pred             Hc-CCeEeeCCccC----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          312 KV-SGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       312 ~~-~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      ++ ++++++||...    .+|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus       351 ~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~  430 (517)
T 3r31_A          351 KAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA  430 (517)
T ss_dssp             HHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred             HhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHH
Confidence            74 78999999312    36899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCCCCCCCc
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPV  453 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~~~  453 (487)
                      .++++++++++|+|+||+++.  ..+.+||||+|.||+|+++|++|+++|++.|+|+.+..+.+.++
T Consensus       431 ~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~  495 (517)
T 3r31_A          431 RAHRVVDGLEAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPY  495 (517)
T ss_dssp             HHHHHHHHSCCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECCC------
T ss_pred             HHHHHHHHCCcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcCCCCCCCc
Confidence            999999999999999999653  56899999999999999999999999999999998875544443

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=9.1e-93  Score=743.46  Aligned_cols=436  Identities=24%  Similarity=0.344  Sum_probs=408.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh---hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA   80 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~   80 (487)
                      +++.+++++.++.+|+++++++|++||+   .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+.
T Consensus        45 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~  124 (501)
T 1bxs_A           45 TEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLG  124 (501)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence            4678899999999999999999999999   8999999999999999999999999999999999999999987657999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      .+++.++++++.++++...... .   ..+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+
T Consensus       125 ~~~~~~~~~a~~~~~~~g~~~~-~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~  200 (501)
T 1bxs_A          125 GCIKTLRYCAGWADKIQGRTIP-M---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL  200 (501)
T ss_dssp             HHHHHHHHHHHHGGGCCEEEEC-C---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred             HHHHHHHHHHHHHHHhhCCeee-c---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHH
Confidence            9999999999998887543211 1   122356889999999999999999987      89999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh-ccccceeeecCCCCcEEEcC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS  230 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~-~~~~p~~~e~gG~~p~iV~~  230 (487)
                      ++..+++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus       201 t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~  280 (501)
T 1bxs_A          201 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA  280 (501)
T ss_dssp             HHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT
T ss_pred             HHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECC
Confidence            999999999998 99999999999 667899999997 999999999999999999999 99999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      |||+|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++
T Consensus       281 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~  359 (501)
T 1bxs_A          281 DADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIE  359 (501)
T ss_dssp             TSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999998 899999999999999999999


Q ss_pred             HHHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          310 DDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      ++.+ ++++++||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus       360 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~  439 (501)
T 1bxs_A          360 SGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK  439 (501)
T ss_dssp             HHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred             HHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHH
Confidence            9864 67999999764 368999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|..+.
T Consensus       440 a~~~~~~l~aG~V~iN~~~~--~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~  496 (501)
T 1bxs_A          440 AITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI  496 (501)
T ss_dssp             HHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred             HHHHHHhcCeeEEEECCCCC--CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEcc
Confidence            99999999999999999653  4578999999999999999999999999999998763

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=1e-92  Score=743.74  Aligned_cols=436  Identities=24%  Similarity=0.360  Sum_probs=406.3

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus        36 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~  114 (505)
T 3prl_A           36 SGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTA  114 (505)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999999 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCcccccccc--CCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITT--FPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +.++++++.+.++............  .+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       115 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t  194 (505)
T 3prl_A          115 DIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLS  194 (505)
T ss_dssp             HHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHH
T ss_pred             HHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence            9999999998876532211100000  02356789999999999999999998      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      +.+|++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.++  +||+++|+|||||+||++||
T Consensus       195 a~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA  272 (505)
T 3prl_A          195 GIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDA  272 (505)
T ss_dssp             HHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTC
T ss_pred             HHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCC
Confidence            99999999998 99999999999 567899999997 999999999999999999887  89999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      |++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+++++||+++..+++++.+++++++
T Consensus       273 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~  351 (505)
T 3prl_A          273 DLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDAL  351 (505)
T ss_dssp             CHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999998899999999999999999999997


Q ss_pred             c-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          313 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       313 ~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      . ++++++||..  .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++
T Consensus       352 ~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~  429 (505)
T 3prl_A          352 ENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINI  429 (505)
T ss_dssp             HTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHH
T ss_pred             HCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHH
Confidence            5 6799999974  689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++|+|+||+++. ...+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus       430 ~~~l~aG~V~iN~~~~-~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~  483 (505)
T 3prl_A          430 GKHLEVGTVHINAKTE-RGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL  483 (505)
T ss_dssp             HHTSCSSEEEESSCCC-SCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred             HHHCCeeEEEEcCCCC-CCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence            9999999999999764 34688999999999999999999999999999998875

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-92  Score=745.22  Aligned_cols=437  Identities=20%  Similarity=0.280  Sum_probs=407.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus        51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~  129 (521)
T 4e4g_A           51 TGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGL  129 (521)
T ss_dssp             TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++..... ..+....  ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       130 ~~l~~~a~~~~~-~~~~~~~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~  206 (521)
T 4e4g_A          130 EVCEFVIGIPHL-QKSEFTE--GAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPI  206 (521)
T ss_dssp             HHHHHHHTHHHH-TCEEEEE--EEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHH
T ss_pred             HHHHHHHHHHHH-hcCcccc--cCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence            999999875443 3322111  11123357889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      ++++++.++ +|+|+||+|+|+.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus       207 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~  286 (521)
T 4e4g_A          207 RLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLD  286 (521)
T ss_dssp             HHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred             HHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHH
Confidence            999999998 99999999999888889999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCC-cHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      .|++.+++++| .|+||.|+++++||||++ ++|+|+++|+++++++++|+|.+ ++++||+++..+++++.+++++++.
T Consensus       287 ~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~  365 (521)
T 4e4g_A          287 QAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIE  365 (521)
T ss_dssp             HHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHH
Confidence            99999999999 999999999999999999 99999999999999999999988 8999999999999999999999864


Q ss_pred             -CCeEeeCCccC-----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          314 -SGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       314 -~~~~~~gg~~~-----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                       ++++++||...     .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus       366 ~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~  445 (521)
T 4e4g_A          366 QGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDA  445 (521)
T ss_dssp             HTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHH
T ss_pred             CCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHH
Confidence             77999999642     468999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEeC
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g--~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++++|+|+||+++. ...+.+||||+|.||+|  +++|.+|+++|++.|+|+.++
T Consensus       446 a~~~~~~l~aG~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~  505 (521)
T 4e4g_A          446 ARDFASRINIGMVGVNVPIP-VPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW  505 (521)
T ss_dssp             HHHHHHHCCCSEEEESCSSC-CCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred             HHHHHHhCCeeeEEECCCCC-CCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEec
Confidence            99999999999999999753 34588999999999999  789999999999999998864

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=6.3e-93  Score=744.51  Aligned_cols=436  Identities=24%  Similarity=0.354  Sum_probs=408.3

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh---hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA   80 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~   80 (487)
                      +++.+++++.++.+|+++++++|++||+   .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+.
T Consensus        44 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~  123 (500)
T 1o04_A           44 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLD  123 (500)
T ss_dssp             TTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            4678899999999999999999999999   8999999999999999999999999999999999999999987657999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      .+++.++++++.++++...... .   ..+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+
T Consensus       124 ~~~~~~~~~a~~~~~~~g~~~~-~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~  199 (500)
T 1o04_A          124 MVLKCLRYYAGWADKYHGKTIP-I---DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL  199 (500)
T ss_dssp             HHHHHHHHHHHHTTTCCEEEEC-C---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred             HHHHHHHHHHHHHHHhhCccee-c---CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChH
Confidence            9999999999988877543211 1   122356789999999999999999987      89999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh-ccccceeeecCCCCcEEEcC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS  230 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~-~~~~p~~~e~gG~~p~iV~~  230 (487)
                      ++.++++++.++ +|+|++|+|+| +.+.+..|++|+ ||.|+||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus       200 t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~  279 (500)
T 1o04_A          200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS  279 (500)
T ss_dssp             HHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECT
T ss_pred             HHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECC
Confidence            999999999998 99999999999 667899999997 999999999999999999999 99999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      |||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++
T Consensus       280 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~  358 (500)
T 1o04_A          280 DADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYIN  358 (500)
T ss_dssp             TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999998 899999999999999999999


Q ss_pred             HHHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          310 DDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      ++.+ ++++++||... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus       359 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~  438 (500)
T 1o04_A          359 TGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK  438 (500)
T ss_dssp             HHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred             HHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence            9864 67999999764 368999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++|++.|+|..+.
T Consensus       439 a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~  495 (500)
T 1o04_A          439 ANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV  495 (500)
T ss_dssp             HHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred             HHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEec
Confidence            99999999999999999653  4578999999999999999999999999999998763

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.6e-93  Score=743.25  Aligned_cols=434  Identities=26%  Similarity=0.372  Sum_probs=407.3

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh--hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~   81 (487)
                      +++.+++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus        33 tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~  112 (495)
T 3b4w_A           33 TGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMG  112 (495)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            4678899999999999999999999999  99999999999999999999999999999999999999999986579999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.++++++.++++.... ..   ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|++
T Consensus       113 ~~~~~~~~a~~~~~~~g~~-~~---~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t  188 (495)
T 3b4w_A          113 SMGAMNYFAGAADKVTWTE-TR---TGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLT  188 (495)
T ss_dssp             HHHHHHHHHTCGGGSCSEE-EE---EETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHH
T ss_pred             HHHHHHHHHHHHHHhcCCc-cc---CCCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHH
Confidence            9999999998887765422 11   1112256889999999999999999998      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      +.++++++.++ +|+|++|+|+|+.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus       189 ~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dAD  268 (495)
T 3b4w_A          189 ANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVD  268 (495)
T ss_dssp             HHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCC
T ss_pred             HHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCC
Confidence            99999999998 99999999999777899999996 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      ++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++++.
T Consensus       269 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~  347 (495)
T 3b4w_A          269 LAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGI  347 (495)
T ss_dssp             HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999988 899999999999999999999987


Q ss_pred             c-CCeEeeCCccCC---CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          313 V-SGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       313 ~-~~~~~~gg~~~~---~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      + ++++++||....   .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus       348 ~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a  427 (495)
T 3b4w_A          348 EEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKG  427 (495)
T ss_dssp             HTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHH
T ss_pred             hCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHH
Confidence            5 679999997643   589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +++++++++|+|+||++.   ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus       428 ~~~~~~l~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~  481 (495)
T 3b4w_A          428 IKISQQIRTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP  481 (495)
T ss_dssp             HHHHHHSCCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred             HHHHHhCCEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence            999999999999999864   458899999999999999999999999999999875

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=2.4e-92  Score=738.83  Aligned_cols=435  Identities=24%  Similarity=0.360  Sum_probs=406.7

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.+.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus        31 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~  109 (479)
T 2imp_A           31 TEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTA  109 (479)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.++++......   ....+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       110 ~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  186 (479)
T 2imp_A          110 DYIDYMAEWARRYEGEIIQ---SDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI  186 (479)
T ss_dssp             HHHHHHHTTTTTCCCEEEC---CSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred             HHHHHHHHHHHHhhCCccc---cCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence            9999998877766543211   11112356889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++++++.++ +|+|++|+|+|+ .+.++.|++|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       187 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl  266 (479)
T 2imp_A          187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADL  266 (479)
T ss_dssp             HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCH
T ss_pred             HHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCH
Confidence            999999998 999999999994 46789999996 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC--CCcccccCCHHHHHHHHHHHHHHH
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE--SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~--~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      +.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+  ++++||++++.+++++.++++++.
T Consensus       267 ~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~  345 (479)
T 2imp_A          267 ELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAV  345 (479)
T ss_dssp             HHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999986  899999999999999999999986


Q ss_pred             c-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 011397          313 V-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ  390 (487)
Q Consensus       313 ~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~  390 (487)
                      + ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++
T Consensus       346 ~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~  425 (479)
T 2imp_A          346 EEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMK  425 (479)
T ss_dssp             HTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHH
T ss_pred             HCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence            5 67999999752 358999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          391 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       391 ~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +++++++|+|+||+++.+  .+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus       426 ~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~  478 (479)
T 2imp_A          426 AIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ  478 (479)
T ss_dssp             HHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence            999999999999997654  58899999999999999999999999999999764

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=1.7e-92  Score=738.77  Aligned_cols=429  Identities=28%  Similarity=0.432  Sum_probs=403.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++
T Consensus        21 tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~   99 (486)
T 3pqa_A           21 SLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSI   99 (486)
T ss_dssp             TCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+.++......     ..+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       100 ~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  174 (486)
T 3pqa_A          100 GTFKLAAFYVKEHRDEVIP-----SDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI  174 (486)
T ss_dssp             HHHHHHHHHHHHCCEEEEC-----CTTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHH
T ss_pred             HHHHHHHHHHHHhcCceec-----CCCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHH
Confidence            9999999998887533211     113467889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-----cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcC
Q 011397          158 LLAKLVGEY-----MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS  230 (487)
Q Consensus       158 ~l~~~l~~a-----lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~  230 (487)
                      ++++++.++     +|+|++|+|+|+ .+.++.|++|+ ||.|+||||+.+|+.|++.++  +||+++|+|||||+||++
T Consensus       175 ~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~  252 (486)
T 3pqa_A          175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLK  252 (486)
T ss_dssp             HHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECT
T ss_pred             HHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcC
Confidence            999999988     999999999994 45689999997 999999999999999998877  899999999999999999


Q ss_pred             CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      |||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++
T Consensus       253 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~  331 (486)
T 3pqa_A          253 DADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVE  331 (486)
T ss_dssp             TSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999988 899999999999999999999


Q ss_pred             HHHc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          310 DDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      ++.. ++++++||..  +|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.+.+
T Consensus       332 ~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a  407 (486)
T 3pqa_A          332 KAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKS  407 (486)
T ss_dssp             HHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHH
T ss_pred             HHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHH
Confidence            9875 6799999965  5899999999 9999999999999999999999999 99999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus       408 ~~~~~~l~aG~v~vN~~~~~-~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~  464 (486)
T 3pqa_A          408 LKFAENLEFGGVVINDSSLF-RQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK  464 (486)
T ss_dssp             HHHHHHSCSSEEEESSCTTC-CCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred             HHHHHhCCcceEEEeCCCCc-CCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence            99999999999999998653 3458999999999999999999999999999998875

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=4.2e-92  Score=734.80  Aligned_cols=435  Identities=22%  Similarity=0.361  Sum_probs=410.7

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      ++|.+++++..+.+++++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..++
T Consensus        16 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~   94 (462)
T 3etf_A           16 TGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSA   94 (462)
T ss_dssp             TCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++....+.....    ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        95 ~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~  170 (462)
T 3etf_A           95 ALCDWYAEHGPAMLNPEP----TLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQ  170 (462)
T ss_dssp             HHHHHHHHHHHHHTSCEE----CSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHH
T ss_pred             HHHHHHHHhHHHhcCCcc----cCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHH
Confidence            999999998887764431    11123467889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      ++++++.++ +|+|++|+|+|+.+.+..|++|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus       171 ~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~  250 (462)
T 3etf_A          171 MIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLE  250 (462)
T ss_dssp             HHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTSCHH
T ss_pred             HHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCCCHH
Confidence            999999998 99999999999888899999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++++.. 
T Consensus       251 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~  329 (462)
T 3etf_A          251 LAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAE  329 (462)
T ss_dssp             HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHC
Confidence            99999999999 99999999999999999999999999999999999999988 8999999999999999999999875 


Q ss_pred             CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397          314 SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV  392 (487)
Q Consensus       314 ~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~  392 (487)
                      ++++++||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+++++
T Consensus       330 ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~  409 (462)
T 3etf_A          330 GARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMA  409 (462)
T ss_dssp             TCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHH
T ss_pred             CCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence            6799999974 357899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++|++.|+|+.++
T Consensus       410 ~~l~aG~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r  461 (462)
T 3etf_A          410 ARLECGGVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR  461 (462)
T ss_dssp             HHCCSSEEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred             HhCCcceEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence            999999999999753  5688999999999999999999999999999998764

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=3.5e-92  Score=742.06  Aligned_cols=435  Identities=23%  Similarity=0.336  Sum_probs=407.1

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++
T Consensus        51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~  129 (515)
T 2d4e_A           51 TNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAA  129 (515)
T ss_dssp             TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            567889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.++++.... ...  ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       130 ~~l~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  206 (515)
T 2d4e_A          130 ENFAFYAEYAEHAMEDR-TFP--VDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT  206 (515)
T ss_dssp             HHHHHHHTTGGGTTCEE-ECC--BTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred             HHHHHHHHHHHHhcCcc-ccc--CCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHH
Confidence            99999988877765321 111  0122356789999999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++++++.++ +|+|++|+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       207 ~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl  286 (515)
T 2d4e_A          207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADL  286 (515)
T ss_dssp             HHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred             HHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCH
Confidence            999999998 99999999999 457899999996 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++|+++.+
T Consensus       287 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~  365 (515)
T 2d4e_A          287 ERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKR  365 (515)
T ss_dssp             HHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999999 7999999999999999999999864


Q ss_pred             -CCeEeeCCccCC---------CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecC
Q 011397          314 -SGKIVHGGERDK---------NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN  383 (487)
Q Consensus       314 -~~~~~~gg~~~~---------~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~  383 (487)
                       ++++++||....         .|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus       366 ~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~  444 (515)
T 2d4e_A          366 EGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTR  444 (515)
T ss_dssp             TTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred             CCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECC
Confidence             679999997643         589999999999 999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          384 NKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       384 d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      |.+.++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus       445 d~~~a~~~~~~l~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~  505 (515)
T 2d4e_A          445 DLERAHRLALELEAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL  505 (515)
T ss_dssp             BHHHHHHHHHHSCSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred             CHHHHHHHHHhCCeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence            999999999999999999998653  5688999999999999999999999999999998864

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=6.5e-92  Score=740.80  Aligned_cols=437  Identities=22%  Similarity=0.337  Sum_probs=408.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus        61 t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~  139 (516)
T 1uzb_A           61 PSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAI  139 (516)
T ss_dssp             EEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.++++.......  ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       140 ~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~  217 (516)
T 1uzb_A          140 DFIEYYARAALRYRYPAVEV--VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA  217 (516)
T ss_dssp             HHHHHHHHHHGGGCSSCCCC--CCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred             HHHHHHHHHHHHhcCCcccc--cCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHH
Confidence            99999999988876533210  11112356789999999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh------ccccceeeecCCCCcEEE
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF  228 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~------~~~~p~~~e~gG~~p~iV  228 (487)
                      .+++++.++ +|+|++|+|+| +.+.+..|++|+ ||.|+||||+.+|+.|++.++      +++||+++|+|||||+||
T Consensus       218 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV  297 (516)
T 1uzb_A          218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV  297 (516)
T ss_dssp             HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred             HHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeE
Confidence            999999998 99999999999 667899999997 999999999999999999998      789999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 011397          229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKL  307 (487)
Q Consensus       229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~  307 (487)
                      ++|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++||| + ++++||++++.+++++.++
T Consensus       298 ~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~  375 (516)
T 1uzb_A          298 DETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSY  375 (516)
T ss_dssp             CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHH
Confidence            999999999999999999 999999999999999999999999999999999999999 7 8999999999999999999


Q ss_pred             HHHHHcCCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          308 LDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       308 i~~a~~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      ++++.+.+++++||.. +..|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus       376 i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~  455 (516)
T 1uzb_A          376 IEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKRE  455 (516)
T ss_dssp             HHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHH
T ss_pred             HHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence            9998766688899976 246899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEe
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~-~~g~~~l~~~~~~k~v~~~  445 (487)
                      .++++++++++|+|+||+++.+...+.+||||+|.||+|+ ++|.+++++|++.|+|..+
T Consensus       456 ~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~  515 (516)
T 1uzb_A          456 HLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER  515 (516)
T ss_dssp             HHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred             HHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence            9999999999999999997666567889999999999995 7899999999999998763

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=4.1e-92  Score=737.42  Aligned_cols=435  Identities=23%  Similarity=0.373  Sum_probs=406.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus        34 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~  112 (481)
T 3jz4_A           34 NGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAA  112 (481)
T ss_dssp             TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            457889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++....+.... ...  ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       113 ~~~~~~a~~~~~~~~~-~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~  189 (481)
T 3jz4_A          113 SFIEWFAEEGKRIYGD-TIP--GHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL  189 (481)
T ss_dssp             HHHHHHHHHGGGCCEE-EEC--CSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred             HHHHHHHHHHHHhcCc-ccc--ccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence            9999998776543211 111  11123367789999999999999999988      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+
T Consensus       190 ~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl  269 (481)
T 3jz4_A          190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADL  269 (481)
T ss_dssp             HHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCH
T ss_pred             HHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCH
Confidence            999999998 99999999999 667899999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      +.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++..
T Consensus       270 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~  348 (481)
T 3jz4_A          270 DKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALE  348 (481)
T ss_dssp             HHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999998 8999999999999999999999875


Q ss_pred             -CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 -SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 -~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                       ++++++||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus       349 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~  428 (481)
T 3jz4_A          349 KGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRV  428 (481)
T ss_dssp             TTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHH
T ss_pred             CCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence             6799999976 34679999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus       429 ~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~  480 (481)
T 3jz4_A          429 GEALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG  480 (481)
T ss_dssp             HHHCCCSEEEESCSCC--CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHhCCeeeEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence            9999999999999754  468899999999999999999999999999999864

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=9.3e-92  Score=733.46  Aligned_cols=446  Identities=23%  Similarity=0.326  Sum_probs=411.9

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++|+++|+++++.|+||+. ++. .|+...+
T Consensus        15 tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~~   92 (474)
T 4h7n_A           15 TGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS-ITV-LEIDSFL   92 (474)
T ss_dssp             TCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-HHH-HHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-HHH-HHHHHHH
Confidence            45788999999999999999999999999999999999999999999999999999999999999985 444 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++....++.........  .........++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~  170 (474)
T 4h7n_A           93 ASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVA  170 (474)
T ss_dssp             HHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHH
T ss_pred             HHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHH
Confidence            9999998888877654432211  112255677899999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV  236 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~  236 (487)
                      .+.+++.++ +|+|++++++|+.+.+..|+.| +|.|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.
T Consensus       171 ~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~  249 (474)
T 4h7n_A          171 PLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLEL  249 (474)
T ss_dssp             HHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHH
T ss_pred             HHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHH
Confidence            999999998 9999999999998999999877 89999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-C
Q 011397          237 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-S  314 (487)
Q Consensus       237 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-~  314 (487)
                      |++.+++++| +|+||.|++++|||||++++|+|+++|++++.++++|+|.+ ++++||++++.+.+++.++++++.+ +
T Consensus       250 aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~g  328 (474)
T 4h7n_A          250 ATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKG  328 (474)
T ss_dssp             HHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhC
Confidence            9999999999 99999999999999999999999999999999999999998 8999999999999999999999875 6


Q ss_pred             CeEeeCCccC--CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH
Q 011397          315 GKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV  392 (487)
Q Consensus       315 ~~~~~gg~~~--~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~  392 (487)
                      ++++.||...  .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus       329 a~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a  408 (474)
T 4h7n_A          329 AVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVA  408 (474)
T ss_dssp             CEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHH
T ss_pred             ceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence            7888888754  46899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcceeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEeCCCCCCCccC
Q 011397          393 ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPVRY  455 (487)
Q Consensus       393 ~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~  455 (487)
                      +++++|+|+||+++.+...+.+||||+|.||+| +++|.+|+++|++.|+|+++....+.++||
T Consensus       409 ~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~  472 (474)
T 4h7n_A          409 RQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF  472 (474)
T ss_dssp             TTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred             HhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence            999999999999887777789999999999998 789999999999999999886544555544

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=5.4e-92  Score=736.46  Aligned_cols=435  Identities=24%  Similarity=0.383  Sum_probs=407.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus        35 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~  113 (487)
T 2w8n_A           35 SGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSA  113 (487)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            567889999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.++++.. +....  ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       114 ~~~~~~a~~~~~~~g-~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  190 (487)
T 2w8n_A          114 FFLEWFSEEARRVYG-DIIHT--PAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSAL  190 (487)
T ss_dssp             HHHHHHHHHGGGCCC-EEECC--SCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHH
T ss_pred             HHHHHHHHHHHHhcC-ccccc--CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence            999999988766432 21111  1123466889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEe---C-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397          158 LLAKLVGEY-MDLSSIRVVE---G-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~---g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      .+++++.++ +|+|++|+|+   | +.+.++.|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|
T Consensus       191 ~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~d  270 (487)
T 2w8n_A          191 ALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDS  270 (487)
T ss_dssp             HHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTT
T ss_pred             HHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCC
Confidence            999999998 9999999999   8 567889999997 999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhh-hcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      ||++.|++.+++++| .|+||.|+++++||||++++|+|+++|++++++ +++|||.+ ++++||++++.+++++.++++
T Consensus       271 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~  349 (487)
T 2w8n_A          271 ANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN  349 (487)
T ss_dssp             SCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHH
Confidence            999999999999999 999999999999999999999999999999999 99999998 899999999999999999999


Q ss_pred             HHHc-CCeEeeCCccCCCCc-eeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          310 DDKV-SGKIVHGGERDKNKL-RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~~~g~-~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      ++.+ ++++++||..+..|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.
T Consensus       350 ~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~  429 (487)
T 2w8n_A          350 DAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQ  429 (487)
T ss_dssp             HHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHH
T ss_pred             HHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHH
Confidence            9875 679999997655688 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++++++|+|+||++..+  .+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus       430 a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~  485 (487)
T 2w8n_A          430 IWRVAEQLEVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG  485 (487)
T ss_dssp             HHHHHHHSCSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred             HHHHHHhCCeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence            999999999999999997653  46799999999999999999999999999999764

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.8e-91  Score=734.61  Aligned_cols=436  Identities=22%  Similarity=0.358  Sum_probs=389.9

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus        37 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~  115 (508)
T 3r64_A           37 DDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAG  115 (508)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999998 7999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH-
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS-  156 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~-  156 (487)
                      +.++++++..+....  ..... ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++ 
T Consensus       116 ~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  192 (508)
T 3r64_A          116 NITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG  192 (508)
T ss_dssp             HHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHT
T ss_pred             HHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence            999998766554322  11100 0112467889999999999999999998      8999999999999999999999 


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc--cccceeeecCCCCcEEEcCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~--~~~p~~~e~gG~~p~iV~~d  231 (487)
                      .++++++.++ +|+|++|+|+|+ .+.++.|++|+ +|.|+||||+.+|+.|++.+++  ++||+++|+|||||+||++|
T Consensus       193 ~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~d  272 (508)
T 3r64_A          193 VIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLAD  272 (508)
T ss_dssp             HHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTT
T ss_pred             HHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCC
Confidence            9999999998 999999999994 78899999997 9999999999999999999998  89999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||+|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.+++++
T Consensus       273 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~  351 (508)
T 3r64_A          273 ADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIEL  351 (508)
T ss_dssp             SCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999998 8999999999999999999999


Q ss_pred             HHc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          311 DKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       311 a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                      ++. ++++++||..  +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++
T Consensus       352 a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~  429 (508)
T 3r64_A          352 AKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAA  429 (508)
T ss_dssp             HHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHH
T ss_pred             HHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHH
Confidence            975 6799999975  6899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCC
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGF  447 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~  447 (487)
                      ++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+++..
T Consensus       430 ~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~  486 (508)
T 3r64_A          430 QFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS  486 (508)
T ss_dssp             HHHTTSCSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred             HHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence            9999999999999998754 46889999999999999999999999999999988753

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=9e-92  Score=736.60  Aligned_cols=435  Identities=20%  Similarity=0.316  Sum_probs=404.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh-hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +++.+++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus        41 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~  119 (501)
T 1uxt_A           41 DLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAA  119 (501)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence            5678899999999999999999999999 99999999999999999999999999999999999999999998 899999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccccccC--CCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           83 KTSIKSALKELKHWMTPEKAKTSITTF--PSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      ++.++++++.++++.. +.........  ....+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.
T Consensus       120 ~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~  198 (501)
T 1uxt_A          120 VDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL  198 (501)
T ss_dssp             HHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred             HHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchH
Confidence            9999999888777632 2111100011  1256889999999999999999988      89999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      ++.++++++.++ +|+|++|+|+|+.+.++.|++|+ +|.|+||||+.+|+.|++.++  +||+++|+|||||+||++||
T Consensus       199 t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA  276 (501)
T 1uxt_A          199 PAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDA  276 (501)
T ss_dssp             HHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTS
T ss_pred             HHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCC
Confidence            999999999998 99999999999657889999996 999999999999999999887  89999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.++++++
T Consensus       277 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a  355 (501)
T 1uxt_A          277 DLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDA  355 (501)
T ss_dssp             CHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999998 89999999999999999999998


Q ss_pred             Hc-CCeEeeCCccCCCC-ceeecEEEecCC---CCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          312 KV-SGKIVHGGERDKNK-LRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       312 ~~-~~~~~~gg~~~~~g-~~~~Ptv~~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      .. ++++++||..  .| +|++|||+.+++   ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus       356 ~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~  433 (501)
T 1uxt_A          356 VEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVV  433 (501)
T ss_dssp             HHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHH
T ss_pred             HHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHH
Confidence            75 6699999975  57 999999999999   99999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      .++++++++++|+|+||+++ +...+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus       434 ~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~  492 (501)
T 1uxt_A          434 KIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY  492 (501)
T ss_dssp             HHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred             HHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec
Confidence            99999999999999999974 345689999999999999999999999999999998874

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=2.6e-91  Score=733.50  Aligned_cols=436  Identities=17%  Similarity=0.224  Sum_probs=402.7

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..++. .|+..++
T Consensus        46 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~  124 (500)
T 2j6l_A           46 NNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYV  124 (500)
T ss_dssp             TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999996 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.++++... ...  ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       125 ~~~~~~a~~~~~~~g~-~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  201 (500)
T 2j6l_A          125 DICDYAVGLSRMIGGP-ILP--SERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISV  201 (500)
T ss_dssp             HHHHHHHHHTTTCCCB-EEC--CSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred             HHHHHHHHHHHHhcCc-ccc--ccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHH
Confidence            9999998877655321 111  00112245678999999999999999986      89999999999999999999999


Q ss_pred             HHHHHHhh----h-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCC
Q 011397          158 LLAKLVGE----Y-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG  231 (487)
Q Consensus       158 ~l~~~l~~----a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~d  231 (487)
                      ++++++.+    + +|+|++|+|+|+.+.++.|++|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|
T Consensus       202 ~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~d  281 (500)
T 2j6l_A          202 AVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFED  281 (500)
T ss_dssp             HHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTT
T ss_pred             HHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCC
Confidence            99998775    3 99999999999777899999996 999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHH
Q 011397          232 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDD  310 (487)
Q Consensus       232 aDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~  310 (487)
                      ||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||++++.+++++.+++++
T Consensus       282 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~  360 (500)
T 2j6l_A          282 ADLSLVVPSALFAAV-GTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEE  360 (500)
T ss_dssp             CCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999999998 8999999999999999999999


Q ss_pred             HHc-CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          311 DKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       311 a~~-~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      +++ ++++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus       361 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a  440 (500)
T 2j6l_A          361 AKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRI  440 (500)
T ss_dssp             HHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHH
T ss_pred             HHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence            875 6799999975 34689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHH--HhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          389 QQFV--ETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       389 ~~~~--~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++  .++++|+|+||+++. ...+.+||||+|.||+|+++|.+|+++|++.|+|...
T Consensus       441 ~~~~~~~~~~~G~V~vN~~~~-~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~  498 (500)
T 2j6l_A          441 FRWLGPKGSDCGIVNVNIPTS-GAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN  498 (500)
T ss_dssp             HHHHSTTSCCSSEEEESSCTT-CCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred             HHHHhhccCCeeEEEECCCCc-cCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence            9999  779999999998653 3457899999999999999999999999999999764

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=6.3e-91  Score=729.71  Aligned_cols=436  Identities=20%  Similarity=0.313  Sum_probs=384.3

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus        31 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  109 (485)
T 4dng_A           31 DQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTI  109 (485)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999999 6999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHH-
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASS-  156 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~-  156 (487)
                      +.++++++.++... +...... ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++ 
T Consensus       110 ~~~~~~a~~~~~~~-~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~  187 (485)
T 4dng_A          110 AILDEAMTYTGELG-GVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG  187 (485)
T ss_dssp             HHHHHHHHHGGGCS-CEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHT
T ss_pred             HHHHHHHHHHHHhC-Ceecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence            99999988876432 2211110 0122467889999999999999999988      8999999999999999999999 


Q ss_pred             HHHHHHHhhh-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          157 SLLAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       157 ~~l~~~l~~a-lP~g~v~~v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      .++.+++.++ +|+|+||+|+|+. +.++.|++|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus       188 ~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dAD  267 (485)
T 4dng_A          188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDAD  267 (485)
T ss_dssp             HHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSC
T ss_pred             HHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCC
Confidence            9999999998 9999999999965 5889999997 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      ++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||+++..+.+++.+++++++
T Consensus       268 l~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~  346 (485)
T 4dng_A          268 VDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAK  346 (485)
T ss_dssp             HHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999998 899999999999999999999987


Q ss_pred             c-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          313 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       313 ~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      . ++++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++++||+++|||+|.+.++++
T Consensus       347 ~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~  424 (485)
T 4dng_A          347 TDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKF  424 (485)
T ss_dssp             HTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHH
T ss_pred             HCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence            5 6799999975  689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+++++|++.|+|+.+.
T Consensus       425 ~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~  478 (485)
T 4dng_A          425 ALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK  478 (485)
T ss_dssp             HTTSCSSEEEESCC-----------------------CHHHHHHHEEEEEEEEEC
T ss_pred             HHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence            99999999999997644 5688999999999999999999999999999998765

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=4.3e-91  Score=728.65  Aligned_cols=431  Identities=23%  Similarity=0.363  Sum_probs=403.5

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++. .|+..++
T Consensus        27 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~  105 (475)
T 1euh_A           27 SGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTA  105 (475)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            567889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCC----Ccc-eEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCC
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFP----SSA-EIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVA  152 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~  152 (487)
                      +.++++++.++++..... ...  ..+    ... +++++|+|||++|+|||||+.      ++||++||+||+|||+.+
T Consensus       106 ~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~t  182 (475)
T 1euh_A          106 EIINYAAEEGLRMEGEVL-EGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG  182 (475)
T ss_dssp             HHHHHHHHHHTTCCEEEE-EGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTT
T ss_pred             HHHHHHHHHHHHhcCCcc-cCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcC
Confidence            999999998877653321 111  112    345 889999999999999999988      899999999999999999


Q ss_pred             hHHHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEc
Q 011397          153 PASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD  229 (487)
Q Consensus       153 ~~~~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~  229 (487)
                      |.++.++++++.++ +|+|++|+|+|+ .+.++.|++|+ +|.|+||||+.+|+.|++.++  +||+++|+|||||+||+
T Consensus       183 p~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~  260 (475)
T 1euh_A          183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVL  260 (475)
T ss_dssp             HHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEEC
T ss_pred             hHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEEC
Confidence            99999999999998 999999999995 56789999997 999999999999999999887  89999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHH
Q 011397          230 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       230 ~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      +|||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+++++||+++..+++++.++++
T Consensus       261 ~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~  339 (475)
T 1euh_A          261 EDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLIN  339 (475)
T ss_dssp             TTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999988999999999999999999999


Q ss_pred             HHHc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          310 DDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      ++.+ ++++++||..  .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus       340 ~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~  417 (475)
T 1euh_A          340 DANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA  417 (475)
T ss_dssp             HHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHH
T ss_pred             HHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHH
Confidence            9864 6789999875  589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcC-CccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          389 QQFVETVSAGGLVIND-TAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~-~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +++++++++|+|+||+ +..+  .+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus       418 ~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~  473 (475)
T 1euh_A          418 FGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD  473 (475)
T ss_dssp             HHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             HHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence            9999999999999998 5542  58899999999999999999999999999999865

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.6e-90  Score=725.66  Aligned_cols=436  Identities=22%  Similarity=0.313  Sum_probs=404.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus        30 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  108 (486)
T 1t90_A           30 TKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGI  108 (486)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++.... +..++....  ...+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       109 ~~~~~~a~~~~-~~~g~~~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  185 (486)
T 1t90_A          109 ENVEFAAGAPS-LMMGDSLAS--IATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTE  185 (486)
T ss_dssp             HHHHHHTTHHH-HHCEEEEEE--EETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred             HHHHHHHHHHH-HhcCccccc--CCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence            99999875433 333322111  1122356789999999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      ++++++.++ +|+|++|+|+|+.+.+..|++|+ ||.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++
T Consensus       186 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~  265 (486)
T 1t90_A          186 KLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLE  265 (486)
T ss_dssp             HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred             HHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHH
Confidence            999999998 99999999999878899999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCE-EEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc
Q 011397          236 VACRRMIMGKWGCNNGQACISPDH-IITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      .|++.+++++| .|+||.|+++++ ||||++ +|+|+++|+++++++++|+|.+ ++++||+++..+++++.++++++.+
T Consensus       266 ~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~  343 (486)
T 1t90_A          266 DTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLE  343 (486)
T ss_dssp             HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHh
Confidence            99999999999 999999999999 999999 9999999999999999999988 8999999999999999999999864


Q ss_pred             -CCeEeeCCccC--CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHH
Q 011397          314 -SGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ  390 (487)
Q Consensus       314 -~~~~~~gg~~~--~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~  390 (487)
                       ++++++||...  .+|+|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++
T Consensus       344 ~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~  423 (486)
T 1t90_A          344 EGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRY  423 (486)
T ss_dssp             HTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHH
T ss_pred             CCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHH
Confidence             77999998742  368999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC--CcchHHHHHHhhhccEEEEeC
Q 011397          391 FVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       391 ~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g--~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++++|+|+||++. +...+.+||||+|.||+|  +++|.+|+++|++.|+|+.++
T Consensus       424 ~~~~l~aG~v~vN~~~-~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~  480 (486)
T 1t90_A          424 FRENIDAGMLGINLGV-PAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY  480 (486)
T ss_dssp             HHHHCCCSEEEESCSC-CCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred             HHHhCCcCeEEECCCC-CCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence            9999999999999854 334578999999999999  899999999999999998764

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=8.6e-91  Score=727.45  Aligned_cols=429  Identities=25%  Similarity=0.417  Sum_probs=382.4

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++..+.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++..|+..++
T Consensus        32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~  111 (478)
T 3ty7_A           32 TEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGL  111 (478)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999448999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++.+.++....        .....+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       112 ~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  183 (478)
T 3ty7_A          112 NHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV  183 (478)
T ss_dssp             HHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred             HHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHH
Confidence            99999999888765322        12367889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl  234 (487)
                      ++++++.++ +|+|++|+|+| +.+.++.|+.|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus       184 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl  263 (478)
T 3ty7_A          184 ILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDI  263 (478)
T ss_dssp             HHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCH
T ss_pred             HHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCH
Confidence            999999999 99999999999 567899999997 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH-
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK-  312 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~-  312 (487)
                      +.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|||.+ ++++||+++..+++++.++++++. 
T Consensus       264 ~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~  342 (478)
T 3ty7_A          264 KEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIE  342 (478)
T ss_dssp             HHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence            999999999999 99999999999999999999999999999999999999998 899999999999999999999986 


Q ss_pred             cCCeEeeCCccC----CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          313 VSGKIVHGGERD----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       313 ~~~~~~~gg~~~----~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      +++++++||...    ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+
T Consensus       343 ~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a  422 (478)
T 3ty7_A          343 EGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETL  422 (478)
T ss_dssp             HTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred             CCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence            478999998432    3689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEE
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS  444 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~  444 (487)
                      +++++++++|+|+||+ .  ...+.+||||+|.||+|+++|.+|+++|++.|+|+.
T Consensus       423 ~~~~~~l~~G~v~vN~-~--~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~  475 (478)
T 3ty7_A          423 HKVARSIEAGTVEINE-A--GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG  475 (478)
T ss_dssp             HHHHHHSCSSEEEETT-C--C----------------------CCGGGEEEEEEET
T ss_pred             HHHHHhCCcCeEEECC-C--CCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence            9999999999999999 3  245789999999999999999999999999999873

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=8.3e-90  Score=727.63  Aligned_cols=447  Identities=19%  Similarity=0.247  Sum_probs=408.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHhhcCCCcchhhHHH-HHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNER-EPDIVDALRQDLDKPELESSIYE-VAL   81 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~-~~~la~~~~~e~Gk~~~~a~~~e-v~~   81 (487)
                      +++.+++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++ +++|+.++++|+|||..++. .| +..
T Consensus        87 ~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~-~e~v~~  165 (563)
T 4e3x_A           87 HAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAE-IDAAAE  165 (563)
T ss_dssp             EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHH-HHTTHH
T ss_pred             CCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHh-HHHHHH
Confidence            4688999999999999999999999999999999999999999999999999 99999999999999999998 55 999


Q ss_pred             HHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      +++.++++++.+.++........   ........++.|+|||++|+|||||+.      ++|| +||+||+|||+.+|++
T Consensus       166 ~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~s  241 (563)
T 4e3x_A          166 LIDFFRFNAKFAVELEGEQPISV---PPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLA  241 (563)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCC---TTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCccCC---CCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHH
Confidence            99999999999888765332211   111234566778899999999999996      7888 5999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccc------eeeecCCCCcE
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPV  226 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p------~~~e~gG~~p~  226 (487)
                      +.++++++.++ +|+|+||+|+|+ .+.++.|++|+ ||.|+||||+.+|+.|++.+++++||      +++|+|||||+
T Consensus       242 a~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~  321 (563)
T 4e3x_A          242 SYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFH  321 (563)
T ss_dssp             HHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEE
T ss_pred             HHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCce
Confidence            99999999998 999999999995 46789999997 99999999999999999999999885      99999999999


Q ss_pred             EEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCC-CC-CCcccccCCHHHHHHH
Q 011397          227 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LE-SKDLSRIVNSNHFARL  304 (487)
Q Consensus       227 iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~-~~~~gpl~~~~~~~~~  304 (487)
                      ||++|||+|.|++.+++++| .|+||.|++++|||||+++||+|+++|+++++++++||| .+ ++++||++++.+++++
T Consensus       322 IV~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv  400 (563)
T 4e3x_A          322 FVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARI  400 (563)
T ss_dssp             EECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHH
T ss_pred             eeCCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHH
Confidence            99999999999999999999 999999999999999999999999999999999999999 88 8999999999999999


Q ss_pred             HHHHHHHHc--CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCC--HHHHHHHH-hcCCCCceE
Q 011397          305 SKLLDDDKV--SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAA  378 (487)
Q Consensus       305 ~~~i~~a~~--~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~  378 (487)
                      .++|+++++  ++++++||..+ .+|+|++|||+.+++++|++++||+||||++|++|+|  ++|||+++ |+++|||++
T Consensus       401 ~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta  480 (563)
T 4e3x_A          401 KKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTG  480 (563)
T ss_dssp             HHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEE
T ss_pred             HHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEE
Confidence            999999973  67999999764 4689999999999999999999999999999999997  79999999 789999999


Q ss_pred             EEecCCHHHHHHHHHhcc--eeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEeCCCCCCCccC
Q 011397          379 YLFTNNKKLKQQFVETVS--AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRGFIGDVPVRY  455 (487)
Q Consensus       379 ~v~t~d~~~~~~~~~~~~--~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~  455 (487)
                      +|||+|.+.+++++++++  +|+|+||+.+++...+.+||||+|.||+| +.+|++++++|++.|+|... |.++..++|
T Consensus       481 ~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~~~~~~~~y  559 (563)
T 4e3x_A          481 AVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-HKPLGDWRY  559 (563)
T ss_dssp             EEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-CSCCCCSSC
T ss_pred             EEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-CcCCCcccC
Confidence            999999999999999975  99999999876666788999999999998 89999999999999999876 444444556


Q ss_pred             CC
Q 011397          456 PP  457 (487)
Q Consensus       456 ~~  457 (487)
                      |.
T Consensus       560 p~  561 (563)
T 4e3x_A          560 SY  561 (563)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.9e-87  Score=703.14  Aligned_cols=429  Identities=21%  Similarity=0.296  Sum_probs=398.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      ++|.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus        29 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~  107 (490)
T 3ju8_A           29 GQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMV  107 (490)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence            457889999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++....+.......    ..+....++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  183 (490)
T 3ju8_A          108 NKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAE  183 (490)
T ss_dssp             HHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHH
T ss_pred             HHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHH
Confidence            99999998887765432211    122355677999999999999999987      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccce-eeecCCCCcEEEcCCCCH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPV-LLELGGKSPVVFDSGINL  234 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~-~~e~gG~~p~iV~~daDl  234 (487)
                      ++++++.++ +|+|++|+|+|+.+.++.|++|+ +|.|+||||+.+|+.|++.++++++|+ ++|+|||||+||++|||+
T Consensus       184 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl  263 (490)
T 3ju8_A          184 LTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADL  263 (490)
T ss_dssp             HHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCH
T ss_pred             HHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCCCCH
Confidence            999999998 99999999999888999999997 999999999999999999999999998 799999999999999999


Q ss_pred             HHHHHHHHHHhcccCCCCccccCCEEEEcCCc-HHHHHHHHHHHHhhhcCCC-CCC-CCcccccCCHHHHHHHHHHHHHH
Q 011397          235 KVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKN-PLE-SKDLSRIVNSNHFARLSKLLDDD  311 (487)
Q Consensus       235 ~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-p~~-~~~~gpl~~~~~~~~~~~~i~~a  311 (487)
                      |.|++.+++++| +|+||.|++++++|||+++ +|+|+++|+++++++++|+ |.+ .+++||+++..+.+++.++++++
T Consensus       264 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a  342 (490)
T 3ju8_A          264 DAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHL  342 (490)
T ss_dssp             HHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHH
Confidence            999999999999 9999999999999999996 9999999999999999999 888 89999999999999999999998


Q ss_pred             Hc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHH
Q 011397          312 KV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ  389 (487)
Q Consensus       312 ~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~  389 (487)
                      .. ++++++||... .+|+|++|||+. ++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++
T Consensus       343 ~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~  421 (490)
T 3ju8_A          343 IGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFE  421 (490)
T ss_dssp             HHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHH
T ss_pred             HHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHH
Confidence            64 77999998653 478999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          390 QFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       390 ~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++|+|+||+++. ...+.+||||+|.||.+      ++++|++.|+|+...
T Consensus       422 ~~~~~l~aG~v~vN~~~~-~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~  471 (490)
T 3ju8_A          422 QFLVESRAGIVNWNKQLT-GAASSAPFGGIGASGNH------RPSAYYAADYCAYPV  471 (490)
T ss_dssp             HHHHHCCSSEEEESSCSS-CCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred             HHHHhcCcceEEECCCcC-CCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence            999999999999999764 34578999999999974      589999999987663

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=100.00  E-value=2e-87  Score=745.82  Aligned_cols=438  Identities=18%  Similarity=0.269  Sum_probs=411.0

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      .++.+++++.++.+++++|+++|++||+.|+.+|.++|.++|++++++|++++++|+.+++.|+|||..++. .|+..++
T Consensus       555 ~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai  633 (1026)
T 4f9i_A          555 PSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAI  633 (1026)
T ss_dssp             EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHH
T ss_pred             CCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHH
Confidence            477899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++..+..+........   ..+....+.++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       634 d~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~  710 (1026)
T 4f9i_A          634 DFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGW  710 (1026)
T ss_dssp             HHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred             HHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHH
Confidence            999999999888754332211   123467789999999999999999988      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh------ccccceeeecCCCCcEEE
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF  228 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~------~~~~p~~~e~gG~~p~iV  228 (487)
                      .+++++.++ +|+|+||+|+| +.+.+..|++|+ ||.|+||||+++|+.|++.++      +++||+++|+|||||+||
T Consensus       711 ~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV  790 (1026)
T 4f9i_A          711 HLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIII  790 (1026)
T ss_dssp             HHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred             HHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEE
Confidence            999999998 99999999999 456899999997 999999999999999999988      478999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHH
Q 011397          229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKL  307 (487)
Q Consensus       229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~  307 (487)
                      ++|||++.|++.+++|+| .|+||.|++++++|||++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++
T Consensus       791 ~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~  869 (1026)
T 4f9i_A          791 DDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEY  869 (1026)
T ss_dssp             CTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHH
Confidence            999999999999999999 99999999999999999999999999999999999999999 8999999999999999999


Q ss_pred             HHHHHcCCeEeeCCccCCC-CceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          308 LDDDKVSGKIVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       308 i~~a~~~~~~~~gg~~~~~-g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      |++++..+++++||..++. |+|+.|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus       870 i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~  949 (1026)
T 4f9i_A          870 AEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPE  949 (1026)
T ss_dssp             HHHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHH
T ss_pred             HHHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHH
Confidence            9999876699999976554 999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCC-cchHHHHHHhhhccEEEEeC
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGA-YHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~-~~g~~~l~~~~~~k~v~~~~  446 (487)
                      .++++++++++|+|+||+.+++...+.+||||+|.||+|+ .+|++++++|++.|+|....
T Consensus       950 ~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A          950 HLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp             HHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred             HHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence            9999999999999999998776667889999999999995 68999999999999998865

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=4.8e-86  Score=699.46  Aligned_cols=437  Identities=16%  Similarity=0.231  Sum_probs=391.1

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHH-hhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +++.+++++..+ +|+++++++|++| |+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus        31 tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~  108 (534)
T 2y53_A           31 TGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGG  108 (534)
T ss_dssp             TCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred             CCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence            467889999988 8999999999999 5999999999999999999999999999999999999999999998 799999


Q ss_pred             HHHHHHHHHHHhhhhcCCc---cc-cccccCCC-cceEeeeec-eEEEEEcCCCcchh------hhhhhcCCeEEEeCCC
Q 011397           83 KTSIKSALKELKHWMTPEK---AK-TSITTFPS-SAEIVPEPF-GVVLIISPWNYPFF------VGAIAAGNALVLKPSE  150 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~---~~-~~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~  150 (487)
                      ++.+++++..++.+.....   .. ........ .....++|+ |||++|+|||||+.      ++||++||+||+|||+
T Consensus       109 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~  188 (534)
T 2y53_A          109 IFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPAT  188 (534)
T ss_dssp             HHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCG
T ss_pred             HHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence            9999999887765432110   00 00001111 357789997 99999999999997      8999999999999999


Q ss_pred             CChHHHHHHHHHHhhh--cCCCcEEEEeCChHhHHHHHhC--CCCeEEEecCHHHHHHHHHHHh--ccccceeeecCCCC
Q 011397          151 VAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAA--KHLTPVLLELGGKS  224 (487)
Q Consensus       151 ~~~~~~~~l~~~l~~a--lP~g~v~~v~g~~~~~~~L~~~--~v~~v~ftGs~~~g~~v~~~a~--~~~~p~~~e~gG~~  224 (487)
                      .+|+++..+++++.++  +|+|+||+|+|+.+   .+.++  .+|.|+||||+.+|+.|++.++  +++||+++|+||||
T Consensus       189 ~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~  265 (534)
T 2y53_A          189 ATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLN  265 (534)
T ss_dssp             GGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCE
T ss_pred             cchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCC
Confidence            9999999999999986  69999999998532   24443  3899999999999999998765  88999999999999


Q ss_pred             cEEEcCCC-----CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCH
Q 011397          225 PVVFDSGI-----NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNS  298 (487)
Q Consensus       225 p~iV~~da-----Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~  298 (487)
                      |+||++||     |+|.|++.+++++| +|+||.|++++|||||++++|+|+++|+++++++++|||.+ ++++||++++
T Consensus       266 p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~  344 (534)
T 2y53_A          266 SAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR  344 (534)
T ss_dssp             EEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred             eEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCH
Confidence            99999999     99999999999999 99999999999999999999999999999999999999999 8999999999


Q ss_pred             HHHHHHHHHHHHHHcCCeEeeCCccC-------CCCceeecEEEecCCCC--CcccccccccceeeeeeeC---CH----
Q 011397          299 NHFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPRD--SLIMSEEIFGPLLPILTVD---KI----  362 (487)
Q Consensus       299 ~~~~~~~~~i~~a~~~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~~--~~~~~~E~fgPvl~v~~~~---~~----  362 (487)
                      .+++++.++|+++.+++++++||...       ..|+|++|||+.+++++  |++++||+||||++|++|+   |+    
T Consensus       345 ~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~  424 (534)
T 2y53_A          345 EQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALP  424 (534)
T ss_dssp             HHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CT
T ss_pred             HHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCC
Confidence            99999999999986678999998642       35899999999999987  6899999999999999999   99    


Q ss_pred             -HHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc--ceeeEEEcCCccc-------cCCCCCCcccCCCCCCCCc-chHH
Q 011397          363 -EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAVH-------LAVHSLPFGGVQESGMGAY-HGKF  431 (487)
Q Consensus       363 -~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~--~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~g~~-~g~~  431 (487)
                       ||||+++|+++|||+++|||+|.+.++++++++  ++|+|+||++...       ...+.+||||+|.||+|++ +|.+
T Consensus       425 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~  504 (534)
T 2y53_A          425 EAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLR  504 (534)
T ss_dssp             THHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGG
T ss_pred             HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHH
Confidence             999999999999999999999999999999999  8999999986421       2357899999999999999 6999


Q ss_pred             HHHHhhhccEEEEeC
Q 011397          432 SFDVFSHKKAVLSRG  446 (487)
Q Consensus       432 ~l~~~~~~k~v~~~~  446 (487)
                      ++++|++.|+|...+
T Consensus       505 ~l~~~~~~k~v~~~p  519 (534)
T 2y53_A          505 ALAFYHRRSAIQAAS  519 (534)
T ss_dssp             GGGGGEEEEEEEEEH
T ss_pred             HHHHHhhhheeecCH
Confidence            999999999988764

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=100.00  E-value=8.8e-85  Score=723.15  Aligned_cols=429  Identities=21%  Similarity=0.306  Sum_probs=399.1

Q ss_pred             ccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHH
Q 011397           11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL   90 (487)
Q Consensus        11 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~   90 (487)
                      ++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..++. .|+..+++.+++++
T Consensus       544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a  622 (1001)
T 3haz_A          544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYA  622 (1001)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHH
Confidence            78899999999999999999999999999999999999999999999999999999999999998 89999999999999


Q ss_pred             HHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHh
Q 011397           91 KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVG  164 (487)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~  164 (487)
                      ...+.+.......  ....+...++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+++++.
T Consensus       623 ~~a~~~~g~~~~~--~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~  700 (1001)
T 3haz_A          623 AQGRKLFGSETAM--PGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH  700 (1001)
T ss_dssp             HHHHHHHSSCEEC--CCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             HHHHhhcCccccc--cCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence            9888765432111  11223467889999999999999999988      899999999999999999999999999999


Q ss_pred             hh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhcc---ccceeeecCCCCcEEEcCCCCHHHHHH
Q 011397          165 EY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGINLKVACR  239 (487)
Q Consensus       165 ~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~---~~p~~~e~gG~~p~iV~~daDl~~aa~  239 (487)
                      ++ +|+|+||+|+|+.+.+..|++|+ ||.|+||||+.+|+.|++.++++   ++|+++|+|||||+||++|||++.|++
T Consensus       701 eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~  780 (1001)
T 3haz_A          701 EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVAD  780 (1001)
T ss_dssp             HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHH
T ss_pred             HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHH
Confidence            98 99999999999655599999997 99999999999999999988864   899999999999999999999999999


Q ss_pred             HHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHcCCeEe
Q 011397          240 RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIV  318 (487)
Q Consensus       240 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~  318 (487)
                      .+++|+| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||+++..+.+++.++|+++..++++ 
T Consensus       781 ~iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v-  858 (1001)
T 3haz_A          781 DVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL-  858 (1001)
T ss_dssp             HHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-
T ss_pred             HHHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-
Confidence            9999999 99999999999999999999999999999999999999998 89999999999999999999998876688 


Q ss_pred             eCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcc
Q 011397          319 HGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS  396 (487)
Q Consensus       319 ~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~  396 (487)
                      +||..+++|+|+.|||+.+  +++.+++||+||||++|++|++  ++|||+++|+++|||+++|||+|.+.+++++++++
T Consensus       859 ~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~  936 (1001)
T 3haz_A          859 HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQ  936 (1001)
T ss_dssp             EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCC
T ss_pred             eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCC
Confidence            8888766799999999975  6788999999999999999996  79999999999999999999999999999999999


Q ss_pred             eeeEEEcCCccccCCCCCCcccCCCCCCC-CcchHHHHHHhhhccEEEEeC
Q 011397          397 AGGLVINDTAVHLAVHSLPFGGVQESGMG-AYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       397 ~g~v~iN~~~~~~~~~~~pfGG~~~SG~g-~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +|+|+||+++.+...+.+||||+|.||+| +.+|++++++|++.|+|++..
T Consensus       937 aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~  987 (1001)
T 3haz_A          937 VGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT  987 (1001)
T ss_dssp             CSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred             eeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence            99999999876666778999999999999 568999999999999998875

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.4e-84  Score=683.56  Aligned_cols=429  Identities=17%  Similarity=0.203  Sum_probs=387.5

Q ss_pred             cchhhc-cccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKK-KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +++.++ +++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+
T Consensus        49 tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~  127 (528)
T 3v4c_A           49 PAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRT  127 (528)
T ss_dssp             CSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred             CCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence            456777 999999999999999999999999999999999999999999999999999999999999999998 899999


Q ss_pred             HHHHHHHHHHHhh--hhcCCccccccc---cCCCcceEeeeeceEEEEEcCCCcchh--------hhhhhcCCeEEEeCC
Q 011397           83 KTSIKSALKELKH--WMTPEKAKTSIT---TFPSSAEIVPEPFGVVLIISPWNYPFF--------VGAIAAGNALVLKPS  149 (487)
Q Consensus        83 ~~~l~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~--------~~ALaaGN~Vvlkps  149 (487)
                      ++.++++++.++.  |...........   ......+++++|+|||++|+|||||+.        ++||++||+||+|||
T Consensus       128 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps  207 (528)
T 3v4c_A          128 TGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGH  207 (528)
T ss_dssp             HHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred             HHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECC
Confidence            9999999998876  443221100000   012356789999999999999999975        789999999999999


Q ss_pred             CCChHHHHHHHHHHhh----h-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccc--cceeeec
Q 011397          150 EVAPASSSLLAKLVGE----Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL  220 (487)
Q Consensus       150 ~~~~~~~~~l~~~l~~----a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~--~p~~~e~  220 (487)
                      +.+|.++.++++++.+    + +|+|+||+|+| +.+.+..|++|+ ||.|+||||+.+|+.|++.+++++  ||+++|+
T Consensus       208 ~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lEl  287 (528)
T 3v4c_A          208 SAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGEL  287 (528)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred             CCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEec
Confidence            9999999999997754    4 99999999999 568899999997 999999999999999999999999  9999999


Q ss_pred             CCCCcEEEcCCC---CHHHHHHHHHHHhcccCCCCccccCCEEEEcCC-cHHHHHHHHHHHHhhhcCCCCCCCCcccccC
Q 011397          221 GGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIV  296 (487)
Q Consensus       221 gG~~p~iV~~da---Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~  296 (487)
                      |||||+||++||   |++.|++.+++++| +|+||.|+++++||||++ ++|+|+++|++++++++.+     +.+||++
T Consensus       288 GGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~  361 (528)
T 3v4c_A          288 GSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ-----TMLTDGI  361 (528)
T ss_dssp             CCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----ECSCHHH
T ss_pred             CCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----CCCCHHH
Confidence            999999999999   88999999999999 999999999999999998 9999999999999988654     6899999


Q ss_pred             CHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceeecEEEecCCCC---CcccccccccceeeeeeeCCHHHHHHHHhcCC
Q 011397          297 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSGT  373 (487)
Q Consensus       297 ~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~  373 (487)
                      +..+.+++.+++++  .++++++||..  .|+|++|||+.+++++   |++++||+||||++|++|+|+||||+++|+++
T Consensus       362 ~~~~~~~v~~~~~~--~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~  437 (528)
T 3v4c_A          362 AKAYRDGQARFATR--NAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQ  437 (528)
T ss_dssp             HHHHHHHHHHHHTC--TTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHh--CCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCC
Confidence            88888888877642  57799999975  7999999999988887   89999999999999999999999999999999


Q ss_pred             CCceEEEecC--CHHHHHHHHHhcc--eeeEEEcCCcccc-CCCCCCccc-CCCCCCCCcc--hHHHHHHhhhccEEE
Q 011397          374 KPLAAYLFTN--NKKLKQQFVETVS--AGGLVINDTAVHL-AVHSLPFGG-VQESGMGAYH--GKFSFDVFSHKKAVL  443 (487)
Q Consensus       374 ~gl~~~v~t~--d~~~~~~~~~~~~--~g~v~iN~~~~~~-~~~~~pfGG-~~~SG~g~~~--g~~~l~~~~~~k~v~  443 (487)
                      |||+++|||+  |.+++++++++++  +|+|+||+++.+. ..+.+|||| +|.||+|+++  |++|+++|++.|++.
T Consensus       438 ~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q  515 (528)
T 3v4c_A          438 GQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQ  515 (528)
T ss_dssp             CEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEE
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhh
Confidence            9999999999  8999999999997  9999999976532 468899999 9999999986  999999999998754

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=100.00  E-value=1e-82  Score=670.41  Aligned_cols=426  Identities=16%  Similarity=0.205  Sum_probs=382.3

Q ss_pred             cchhh-ccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETK-KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~-~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +++.+ ++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus        16 tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~   94 (510)
T 1ez0_A           16 TGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIART   94 (510)
T ss_dssp             TSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence            46678 7999999999999999999999999999999999999999999999999999999999999999887 899999


Q ss_pred             HHHHHHHHHHHhh--hhcCCcccccc-c-cCC-CcceEeeeeceEEEEEcCCCcchh--------hhhhhcCCeEEEeCC
Q 011397           83 KTSIKSALKELKH--WMTPEKAKTSI-T-TFP-SSAEIVPEPFGVVLIISPWNYPFF--------VGAIAAGNALVLKPS  149 (487)
Q Consensus        83 ~~~l~~~~~~~~~--~~~~~~~~~~~-~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~--------~~ALaaGN~Vvlkps  149 (487)
                      ++.++++++.+++  |.......... . ..+ ...+++++|+|||++|+|||||+.        ++||++||+||+|||
T Consensus        95 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps  174 (510)
T 1ez0_A           95 ANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGH  174 (510)
T ss_dssp             HHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred             HHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECC
Confidence            9999999998875  54322110000 0 001 135789999999999999999964        789999999999999


Q ss_pred             CCChHHHHHHHHHHhh----h-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccc--cceeeec
Q 011397          150 EVAPASSSLLAKLVGE----Y-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL  220 (487)
Q Consensus       150 ~~~~~~~~~l~~~l~~----a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~--~p~~~e~  220 (487)
                      +.+|+++.++++++.+    + +|+|++|+|+| +.+.+..|++|+ ||.|+||||+.+|+.|++.+++++  ||+++|+
T Consensus       175 ~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lEL  254 (510)
T 1ez0_A          175 TAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL  254 (510)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred             CCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEEC
Confidence            9999999999999854    4 89999999999 677899999997 999999999999999999999886  9999999


Q ss_pred             CCCCcEEEcCCCCHH--HHHHHHHHHhcccCCCCccccCCEEEEcCC-cHHHHHHHHHHHHhhhcCCCCCCCCcccccCC
Q 011397          221 GGKSPVVFDSGINLK--VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVN  297 (487)
Q Consensus       221 gG~~p~iV~~daDl~--~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~  297 (487)
                      |||||+||++|||+|  .|++.+++++| +|+||.|+++++||||++ ++|+|+++|++++++++.         ||+++
T Consensus       255 GGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~  324 (510)
T 1ez0_A          255 GAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLT  324 (510)
T ss_dssp             CCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSS
T ss_pred             CCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCC
Confidence            999999999999999  99999999999 999999999999999999 999999999999998864         57888


Q ss_pred             HHHHHHHHHHHHHHHc--CCeEeeCCccCCCCceeecEEEecCCCC---CcccccccccceeeeeeeCCHHHHHHHHhcC
Q 011397          298 SNHFARLSKLLDDDKV--SGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSG  372 (487)
Q Consensus       298 ~~~~~~~~~~i~~a~~--~~~~~~gg~~~~~g~~~~Ptv~~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~  372 (487)
                      +.+.+++.++++++..  ++++++||.   +|+|+.|||+.+++++   |++++||+||||++|++|+|+||||+++|++
T Consensus       325 ~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~  401 (510)
T 1ez0_A          325 PGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEML  401 (510)
T ss_dssp             HHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcC
Confidence            8889999999988873  578999987   3899999999988777   9999999999999999999999999999999


Q ss_pred             CCCceEEEecCCH--HHHHHHHHhc--ceeeEEEcCCcccc-CCCCCCccc-CCCCCCCCc--chHHHHHHhhhccEEE
Q 011397          373 TKPLAAYLFTNNK--KLKQQFVETV--SAGGLVINDTAVHL-AVHSLPFGG-VQESGMGAY--HGKFSFDVFSHKKAVL  443 (487)
Q Consensus       373 ~~gl~~~v~t~d~--~~~~~~~~~~--~~g~v~iN~~~~~~-~~~~~pfGG-~~~SG~g~~--~g~~~l~~~~~~k~v~  443 (487)
                      +|||++||||+|.  +.++++++++  ++|+|+||+++.+. ..+.+|||| +|.||.|+.  +|.+|+++|++.|++.
T Consensus       402 ~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~  480 (510)
T 1ez0_A          402 AGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ  480 (510)
T ss_dssp             CCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred             CCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence            9999999999987  7999999999  79999999865432 347899999 788998754  7999999999888765

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=100.00  E-value=5.5e-78  Score=626.51  Aligned_cols=403  Identities=19%  Similarity=0.193  Sum_probs=322.1

Q ss_pred             CHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCc----chhhHHHHHH-HHHHHHHH
Q 011397           15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSIYEVAL-LKTSIKSA   89 (487)
Q Consensus        15 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~   89 (487)
                      ....+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||.    .++...|+.. ++..++++
T Consensus        12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~   91 (468)
T 1vlu_A           12 HMSSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVM   91 (468)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHH
Confidence            344589999999999999999999999999999999999999999999999999998    8875578988 88999999


Q ss_pred             HHHHhhhhcCCccccc--c-c--cCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEEEeCCCCChHHHHHH
Q 011397           90 LKELKHWMTPEKAKTS--I-T--TFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALVLKPSEVAPASSSLL  159 (487)
Q Consensus        90 ~~~~~~~~~~~~~~~~--~-~--~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vvlkps~~~~~~~~~l  159 (487)
                      ++.++.+.........  . .  ..+...+++++|+|||++|+||| |..     ++||++||+||+|||+.+|.++..+
T Consensus        92 a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l  170 (468)
T 1vlu_A           92 LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-PEVIANITALSIKSGNAAILKGGKESVNTFREM  170 (468)
T ss_dssp             HHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-THHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred             HHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-hHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence            9998887633221000  0 0  01235678999999999999999 933     8999999999999999999999999


Q ss_pred             HHHHh----h----h-cCCCcEEEEeCCh-HhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEE
Q 011397          160 AKLVG----E----Y-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF  228 (487)
Q Consensus       160 ~~~l~----~----a-lP~g~v~~v~g~~-~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV  228 (487)
                      ++++.    +    + +|+|++|+|+ +. +.++.|+.|+ ||.|+||||+++|+.|++.+   +||+++|+|||||+||
T Consensus       171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV  246 (468)
T 1vlu_A          171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYL  246 (468)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEE
T ss_pred             HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEE
Confidence            99995    7    7 9999999999 65 6788999997 99999999999999999876   6999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcC---CCCCCCCcccccCCHHHHHHHH
Q 011397          229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLS  305 (487)
Q Consensus       229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~gpl~~~~~~~~~~  305 (487)
                      ++|||++.|++.+++++| +|+| .|+++++||||+++ |+|+++|.++++++++   |||.+                .
T Consensus       247 ~~dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~  307 (468)
T 1vlu_A          247 DEDADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------K  307 (468)
T ss_dssp             CTTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------H
T ss_pred             CCCCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------h
Confidence            999999999999999999 9999 99999999999999 9999999999999987   76532                3


Q ss_pred             HH-HHHHHcCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCC
Q 011397          306 KL-LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN  384 (487)
Q Consensus       306 ~~-i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d  384 (487)
                      ++ ++++.   ++++||.    |  +.||++  +++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus       308 ~~~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d  376 (468)
T 1vlu_A          308 TAYFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTEN  376 (468)
T ss_dssp             HHHHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSC
T ss_pred             cccccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCC
Confidence            45 66554   4667775    4  689987  78899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcceeeEEEcCCccccCCCCCCcc-----cCCCCCCCCcchHHHHHHhhhccEEEEeCCCCCCCccCCCCc
Q 011397          385 KKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG-----GVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYT  459 (487)
Q Consensus       385 ~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfG-----G~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~  459 (487)
                      .+.++++++++++|+|+||+++.  ..+.+|||     |+|.||+|++ |.+|+++|++.|+|..+..    +.+ +||+
T Consensus       377 ~~~a~~~~~~l~aG~V~vN~~~~--~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~----~~r-~py~  448 (468)
T 1vlu_A          377 KANAEKFMKGVDSSGVYWNASTR--FADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDG----QVA-SDYL  448 (468)
T ss_dssp             HHHHHHHHHHCCCSEEEESSCGG--GCC-----------------------CCSGGGEEEEEEEECSS----CCS-CCC-
T ss_pred             HHHHHHHHHhCCeeEEEEcCCCC--CCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCC----CcC-cccc
Confidence            99999999999999999999764  35788999     9999999999 9999999999999988753    344 7887


Q ss_pred             h
Q 011397          460 K  460 (487)
Q Consensus       460 ~  460 (487)
                      .
T Consensus       449 ~  449 (468)
T 1vlu_A          449 G  449 (468)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=100.00  E-value=1.5e-76  Score=617.01  Aligned_cols=410  Identities=14%  Similarity=0.187  Sum_probs=356.3

Q ss_pred             hccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHH
Q 011397            8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK   87 (487)
Q Consensus         8 ~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~   87 (487)
                      +..++..+.+++++++++|++||+.|+.++.++|.++|+++++.|.+++++|++++++|+||+..+++..+....++.+ 
T Consensus         3 ~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~-   81 (464)
T 3k9d_A            3 LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHV-   81 (464)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH-
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH-
Confidence            4566778899999999999999999999999999999999999999999999999999999999887633443333333 


Q ss_pred             HHHHHHhhhhcCCccccc-cccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHH
Q 011397           88 SALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLA  160 (487)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~  160 (487)
                            ..|.+....... ....+...+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..++
T Consensus        82 ------~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~  155 (464)
T 3k9d_A           82 ------YNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETV  155 (464)
T ss_dssp             ------HHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHH
T ss_pred             ------HHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHH
Confidence                  333322211111 11234577889999999999999999998      89999999999999999999999876


Q ss_pred             HH----Hhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecC-CCCcEEEcCCC
Q 011397          161 KL----VGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG-GKSPVVFDSGI  232 (487)
Q Consensus       161 ~~----l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~g-G~~p~iV~~da  232 (487)
                      ++    +.++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+.    +++.+++++||+ +|+| ||+|+||++||
T Consensus       156 ~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dA  230 (464)
T 3k9d_A          156 RIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSA  230 (464)
T ss_dssp             HHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTS
T ss_pred             HHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCC
Confidence            65    5666 99999999999 678899999997 99999999997    456677889999 6777 99999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHH-------hhhcCCCCC-C-CCcccccCCHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL-------ENFYGKNPL-E-SKDLSRIVNSNHFAR  303 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~p~-~-~~~~gpl~~~~~~~~  303 (487)
                      |++.|++.+++|+| +|+||.|+++++||||+++||+|+++|+++.       +.+++|+|. + ++++||+++..+.++
T Consensus       231 Dl~~Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~  309 (464)
T 3k9d_A          231 NIPRAVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQH  309 (464)
T ss_dssp             CHHHHHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHH
T ss_pred             CHHHHHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHH
Confidence            99999999999999 9999999999999999999999999999986       456778876 4 789999999999999


Q ss_pred             HHHHHHHHHc-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHH----HHHhcCCCCceE
Q 011397          304 LSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAA  378 (487)
Q Consensus       304 ~~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~  378 (487)
                      +.++++.+.. ++++++||..             ++++++++. +|+||||++|++|+|++|||    +++|++++||++
T Consensus       310 i~~~~~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a  375 (464)
T 3k9d_A          310 IANLAGLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTL  375 (464)
T ss_dssp             HHHHTTCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEE
T ss_pred             HHHHhhhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeE
Confidence            9999987654 6788888753             467788755 89999999999999999997    799999999999


Q ss_pred             EEecCCHHHHHHHHHhcceeeEEEcCCccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          379 YLFTNNKKLKQQFVETVSAGGLVINDTAVH-------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       379 ~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~-------~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      +|||+|.+.++++++++++|+|+||+++.+       ...+.+|||| +.+|.|+++|++|+++|++.|+|...
T Consensus       376 ~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~  448 (464)
T 3k9d_A          376 IIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG  448 (464)
T ss_dssp             EEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred             EEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence            999999999999999999999999997643       2578999998 78999999999999999999998764

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.7e-77  Score=620.47  Aligned_cols=408  Identities=20%  Similarity=0.176  Sum_probs=328.6

Q ss_pred             ccchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhc-------CCCcc---
Q 011397            3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL-------DKPEL---   72 (487)
Q Consensus         3 ~~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk~~~---   72 (487)
                      ++.+.+++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+       |||..   
T Consensus        15 ~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl   94 (463)
T 2h5g_A           15 TENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRL   94 (463)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTT
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhh
Confidence            45788999999999999999999999999999999999999999999999999999999999999       69987   


Q ss_pred             -hhhHHHHHHHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEc---CCCcchh-hhhhhcCCeEEEe
Q 011397           73 -ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS---PWNYPFF-VGAIAAGNALVLK  147 (487)
Q Consensus        73 -~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~---p~n~P~~-~~ALaaGN~Vvlk  147 (487)
                       ++. .|+..+++.++++++.+.++...... ......+...+++++|+|||++|+   |||||.. ++||++||+||+|
T Consensus        95 ~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~~~~P~GVv~~I~p~nP~n~p~~~a~ALaaGN~VVlK  172 (463)
T 2h5g_A           95 SLST-SKLNSLAIGLRQIAASSQDSVGRVLR-RTRIAKNLELEQVTVPIGVLLVIFESRPDCLPQVAALAIASGNGLLLK  172 (463)
T ss_dssp             CCCH-HHHHHHHHHHHHHHHHCTTSTTCEEE-EEEEETTEEEEEEEEECCEEEEEESSCTTHHHHHHHHHHHHTCEEEEE
T ss_pred             hhhH-HHHHHHHHHHHHHHHhhHhhcCcccc-cccCCCCceeEEEEEcCceEEEEecCCcHHHHHHHHHHHHcCCEEEEE
Confidence             566 89999999999999887776543211 100011235678999999999999   5555533 9999999999999


Q ss_pred             CCCCChHHHHHHHHHHhhhc----CCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCC
Q 011397          148 PSEVAPASSSLLAKLVGEYM----DLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGG  222 (487)
Q Consensus       148 ps~~~~~~~~~l~~~l~~al----P~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG  222 (487)
                      ||+.+|.++.++++++.+++    |+|+||+|+|+.+.+..|+.|+ ||.|+||||+.+|+.|++.++  +||+++|+||
T Consensus       173 ps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElGG  250 (463)
T 2h5g_A          173 GGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSEG  250 (463)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSCC
T ss_pred             CCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecCC
Confidence            99999999999999999985    6999999999666789999997 999999999999999999887  8999999999


Q ss_pred             CCcEEEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHH
Q 011397          223 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFA  302 (487)
Q Consensus       223 ~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~  302 (487)
                      |||+||++|||++.|++.+++++| .| ||.|+++++||||++++|                        ||+     ++
T Consensus       251 k~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p~-----~~  299 (463)
T 2h5g_A          251 ICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TPL-----FD  299 (463)
T ss_dssp             CEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SHH-----HH
T ss_pred             cceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hHH-----HH
Confidence            999999999999999999999999 98 999999999999999998                        232     22


Q ss_pred             HHHHHHHHHH-cCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEe
Q 011397          303 RLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLF  381 (487)
Q Consensus       303 ~~~~~i~~a~-~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~  381 (487)
                         ++++++. ++++++.|+.....++|+        +++|++++||+||||++|++|+|+||||+++|++++||+++||
T Consensus       300 ---~~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~  368 (463)
T 2h5g_A          300 ---QIIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIV  368 (463)
T ss_dssp             ---HHHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEE
T ss_pred             ---HHHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Confidence               2355554 466777444322234442        5789999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC--Cc--chHHHHHHhhhccEEEEeCCCCCCCccCCC
Q 011397          382 TNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG--AY--HGKFSFDVFSHKKAVLSRGFIGDVPVRYPP  457 (487)
Q Consensus       382 t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g--~~--~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~  457 (487)
                      |+|.+.++++++++++|+|+||++..  ..+.+||||+|.||+|  ++  +|.+|+++|++.|+|..+..    ..+ +|
T Consensus       369 t~d~~~a~~~~~~l~aG~V~iN~~~~--~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~----~~r-~~  441 (463)
T 2h5g_A          369 TEDENTAEFFLQHVDSACVFWNASTR--FSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD----HVV-SD  441 (463)
T ss_dssp             CSCHHHHHHHHHHCCSSEEEESSCGG--GCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS----CCG-GG
T ss_pred             eCCHHHHHHHHHhCCeeEEEEeCCcc--CCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC----ccc-CC
Confidence            99999999999999999999999764  3678999999999999  65  89999999999999988763    334 67


Q ss_pred             CchhHH
Q 011397          458 YTKGKL  463 (487)
Q Consensus       458 ~~~~~~  463 (487)
                      |+..|.
T Consensus       442 y~~~~~  447 (463)
T 2h5g_A          442 FSEHGS  447 (463)
T ss_dssp             GSTTSS
T ss_pred             ccccch
Confidence            775543

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=100.00  E-value=2e-74  Score=597.41  Aligned_cols=401  Identities=18%  Similarity=0.194  Sum_probs=319.2

Q ss_pred             CCccchhhccccCCC-HHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCc----chhh
Q 011397            1 MGSEEETKKKNEVFD-AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESS   75 (487)
Q Consensus         1 ~~~~~~~~~~v~~~~-~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~   75 (487)
                      |||-+--+-..+..+ .+++++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+||+.    .++.
T Consensus         9 ~~~~~~~~~~p~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~   88 (444)
T 4ghk_A            9 MGTLEAQTQGPGSMDIDQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAF   88 (444)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSH
T ss_pred             cchhhhhhcCCccccHHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHH
Confidence            566555555555554 57899999999999999999999999999999999999999999999999999985    4655


Q ss_pred             HH-------HHHHHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCe
Q 011397           76 IY-------EVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNA  143 (487)
Q Consensus        76 ~~-------ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~  143 (487)
                      ..       |+..+++.+++++...+..  ...........+...+++++|+|||++|+||| |..     ++||++||+
T Consensus        89 ~~~~~~~~~~v~~~~~~l~~~a~~~~~~--g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P~~~~~~~~~ALaaGN~  165 (444)
T 4ghk_A           89 VDRLTLSDKALKTMVEGLRQVATLPDPI--GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-PNVTIDAAALCLKSGNA  165 (444)
T ss_dssp             HHHHCCCTTHHHHHHHHHHHHHHSCCCT--TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-HHHHHHHHHHHHHTTCE
T ss_pred             HHHhhccHHHHHHHHHHHHHHHhhcccc--CccCCcccCCCCccceEEEeccEEEEEEeCCC-cHHHHHHHHHHHHcCCE
Confidence            32       6777777777775433211  11111000012346788999999999999998 855     899999999


Q ss_pred             EEEeCCCCChHHHHHHHHHH----hhh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccc
Q 011397          144 LVLKPSEVAPASSSLLAKLV----GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP  215 (487)
Q Consensus       144 Vvlkps~~~~~~~~~l~~~l----~~a-lP~g~v~~v~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p  215 (487)
                      ||+|||+.+|.++..+++++    .++ +|+|++|+|+| +.+ .+..|..|+ ||.|+||||+.+|+.+++.+   +||
T Consensus       166 VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~p  242 (444)
T 4ghk_A          166 TILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVP  242 (444)
T ss_dssp             EEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSC
T ss_pred             EEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCC
Confidence            99999999999999999997    455 99999999998 554 566777786 99999999999999998765   699


Q ss_pred             eeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcC---CCCCCCCcc
Q 011397          216 VLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDL  292 (487)
Q Consensus       216 ~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~  292 (487)
                      +++|+|||||+||++|||++.|++.+++++| +|+| .|+++++||||++++|+|+++|+++++++++   |||.     
T Consensus       243 v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----  315 (444)
T 4ghk_A          243 MIKHLDGICHVYVDDRASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----  315 (444)
T ss_dssp             BCCCCCCCCEEEECTTCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----
T ss_pred             EEEEcCCcCeEEECCCCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----
Confidence            9999999999999999999999999999999 9999 9999999999999999999999999999887   6542     


Q ss_pred             cccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcC
Q 011397          293 SRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG  372 (487)
Q Consensus       293 gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~  372 (487)
                                 ..++++++.             .|      ++  +++++++++||+||||++|++|+|+||||+++|++
T Consensus       316 -----------~~~~i~~a~-------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~  363 (444)
T 4ghk_A          316 -----------ARAVLEAAG-------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEY  363 (444)
T ss_dssp             -----------HHHHHHHTT-------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHH
T ss_pred             -----------HHHHHHhcc-------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhC
Confidence                       245666532             12      11  35678999999999999999999999999999999


Q ss_pred             CCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEeCCC
Q 011397          373 TKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRGFI  448 (487)
Q Consensus       373 ~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g----~~~g~~~l~~~~~~k~v~~~~~~  448 (487)
                      +|||++||||+|.+.++++++++++|+|+||+++.  ..+.+||||.+.||+|    +++|++|+++|++.|+|+...++
T Consensus       364 ~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~--~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~~~  441 (444)
T 4ghk_A          364 GSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTR--FADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHGE  441 (444)
T ss_dssp             SCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGG--GCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEEEE
T ss_pred             CCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCc--cCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECCCc
Confidence            99999999999999999999999999999999764  3578999999999987    67899999999999999887543

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=100.00  E-value=3.4e-74  Score=592.85  Aligned_cols=387  Identities=19%  Similarity=0.243  Sum_probs=327.7

Q ss_pred             cCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCc----chhhH-------HHHH
Q 011397           12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSI-------YEVA   80 (487)
Q Consensus        12 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~   80 (487)
                      .....+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+||+.    .++..       .|+.
T Consensus         9 ~~~~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~   88 (427)
T 1o20_A            9 HHHHMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRID   88 (427)
T ss_dssp             -----CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHH
T ss_pred             chhhhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHH
Confidence            345667899999999999999999999999999999999999999999999999999985    55532       5788


Q ss_pred             HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh-----hhhhhcCCeEEEeCCCCChHH
Q 011397           81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF-----VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~-----~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      .+++.++++++..+. . ...........+...+++++|+|||++|+||| |..     ++||++||+||+|||+.+|.+
T Consensus        89 ~~~~~l~~~a~~~~~-~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p-~~~~~~~~~~ALaaGNtVVlKps~~tp~t  165 (427)
T 1o20_A           89 EMIKACETVIGLKDP-V-GEVIDSWVREDGLRIARVRVPIGPIGIIYESR-PNVTVETTILALKSGNTILLRGGSDALNS  165 (427)
T ss_dssp             HHHHHHHHHHHSCCC-T-TCEEEEEECTTSCEEEEEEEECCCEEEECCSC-THHHHHHHHHHHHTTCCEEEECCGGGHHH
T ss_pred             HHHHHHHHHHhcccc-c-CccccccccCCCceeEEEeecceeEEEEecCC-hHHHHHHHHHHHHcCCEEEEECCHhHHHH
Confidence            888888887654322 1 11100000011234678999999999999997 433     899999999999999999999


Q ss_pred             HHHHHHHHh----hh-cCCCcEEEEeC-ChH-hHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEE
Q 011397          156 SSLLAKLVG----EY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV  227 (487)
Q Consensus       156 ~~~l~~~l~----~a-lP~g~v~~v~g-~~~-~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~i  227 (487)
                      +.++++++.    ++ +|+|++|+|+| +.+ .+..|..|+ ||.|+||||+.+|+.|++.+   +||+++|+|||||+|
T Consensus       166 ~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~i  242 (427)
T 1o20_A          166 NKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIF  242 (427)
T ss_dssp             HHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEE
Confidence            999999997    44 89999999998 554 567777786 99999999999999999877   599999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHH
Q 011397          228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKL  307 (487)
Q Consensus       228 V~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~  307 (487)
                      |++|||+|.|++.+++++| +|+| .|+++++||||++++|+|+++|++++++++++                       
T Consensus       243 V~~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-----------------------  297 (427)
T 1o20_A          243 VDESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE-----------------------  297 (427)
T ss_dssp             ECTTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------
T ss_pred             EeCCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-----------------------
Confidence            9999999999999999999 9999 99999999999999999999999999887542                       


Q ss_pred             HHHHHcCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          308 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       308 i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                                +.||... .+ |+ |||   +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.
T Consensus       298 ----------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~  361 (427)
T 1o20_A          298 ----------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSN  361 (427)
T ss_dssp             ----------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHH
T ss_pred             ----------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHH
Confidence                      1222211 12 33 885   34578899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCC----CcchHHHHHHhhhccEEEEeCC
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG----AYHGKFSFDVFSHKKAVLSRGF  447 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g----~~~g~~~l~~~~~~k~v~~~~~  447 (487)
                      ++++++++++|+|+||++..  ..+.+||||.|.||+|    +++|++|+++|++.|+|...+.
T Consensus       362 a~~~~~~l~~G~V~iN~~~~--~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~  423 (427)
T 1o20_A          362 AKKFVSEIDAAAVYVNASTR--FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY  423 (427)
T ss_dssp             HHHHHHHCCSSEEEESSCGG--GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred             HHHHHHhCCccEEEECCCCc--cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence            99999999999999998654  4678999999999987    4679999999999999988764

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2.7e-73  Score=590.71  Aligned_cols=406  Identities=19%  Similarity=0.206  Sum_probs=326.8

Q ss_pred             ccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHH
Q 011397           11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL   90 (487)
Q Consensus        11 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~   90 (487)
                      ++..+.+|+++++++|++||+.|+.+++++|.++|+++++.+++++++|++++++|+|||..+++..|+..+.+.+.   
T Consensus         1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~---   77 (452)
T 3my7_A            1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIY---   77 (452)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH---
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH---
Confidence            46789999999999999999999999999999999999999999999999999999999999987446555555442   


Q ss_pred             HHHhhhhcCCccccccc-cCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHH
Q 011397           91 KELKHWMTPEKAKTSIT-TFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLV  163 (487)
Q Consensus        91 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l  163 (487)
                          .++.......... ......+.+++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++..+++++
T Consensus        78 ----~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~  153 (452)
T 3my7_A           78 ----NKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV  153 (452)
T ss_dssp             ----HHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred             ----HHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence                2222221111111 122356889999999999999999998      89999999999999999999999999887


Q ss_pred             h----hh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHH
Q 011397          164 G----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV  236 (487)
Q Consensus       164 ~----~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~  236 (487)
                      .    ++ +|+|+||+|+| +.+.++.|++|+ ||.|+||||+.++    +.+++++||+++|+|||||+||++|||++.
T Consensus       154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~  229 (452)
T 3my7_A          154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKR  229 (452)
T ss_dssp             HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred             HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence            6    45 99999999999 678899999997 9999999999854    456778999999999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHc-CC
Q 011397          237 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV-SG  315 (487)
Q Consensus       237 aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~  315 (487)
                      |++.+++|+| +|+||.|+++++||||+++||+|+++|+++              +||++++.+.+++.++++++.. ++
T Consensus       230 Aa~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a  294 (452)
T 3my7_A          230 AVASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNA  294 (452)
T ss_dssp             HHHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred             HHHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence            9999999999 999999999999999999999999999864              4899999999999999976433 34


Q ss_pred             eEeeCCccC----CCCceeecEE-------EecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCC----CCceEEE
Q 011397          316 KIVHGGERD----KNKLRIAPTL-------LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT----KPLAAYL  380 (487)
Q Consensus       316 ~~~~gg~~~----~~g~~~~Ptv-------~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~v  380 (487)
                      ++ +||...    ..|+|++||+       +.++++++++.+ |+||||++|++|+|++|||+++|++.    +||+++|
T Consensus       295 ~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i  372 (452)
T 3my7_A          295 KI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGL  372 (452)
T ss_dssp             GG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             eE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEE
Confidence            44 576542    2589999997       668889999775 89999999999999999999999974    9999999


Q ss_pred             ecCCHHHHHH---HHHhcceeeEEEcCCcccc---------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          381 FTNNKKLKQQ---FVETVSAGGLVINDTAVHL---------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       381 ~t~d~~~~~~---~~~~~~~g~v~iN~~~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ||+|.+.+++   +++++++|+|+||+++.+.         ..+.+++ |++..|.+...++.+.++|.+.|+|..+
T Consensus       373 ~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~  448 (452)
T 3my7_A          373 YTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKR  448 (452)
T ss_dssp             ESCTTTCHHHHHHHHHHCCCSEEEESCCCC-----------------------------CCCCCGGGGEEEEEEECC
T ss_pred             EcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEee
Confidence            9999777777   9999999999999965321         0111111 2222333333445666777777776543

>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}

Probab=97.60  E-value=0.048  Score=54.10  Aligned_cols=330  Identities=16%  Similarity=0.173  Sum_probs=171.4

Q ss_pred             hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhc-CCC------cchhhHHHHHHH--------HHHHHHHHHHHhhh
Q 011397           32 SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL-DKP------ELESSIYEVALL--------KTSIKSALKELKHW   96 (487)
Q Consensus        32 ~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-Gk~------~~~a~~~ev~~~--------~~~l~~~~~~~~~~   96 (487)
                      .++..+..+-.+..+.+.+.++++.|+=....++.. |..      +.-.. .|+..+        .+.|+...++++.+
T Consensus        26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~-~ei~~A~~~l~~~~~~ai~~A~~~I~~f  104 (423)
T 4gic_A           26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPR-DVLEAAWQALPAEQAKALREAAERIRAY  104 (423)
T ss_dssp             CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECH-HHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCH-HHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence            455556666666777777777777665444444432 111      11111 333322        22344444444444


Q ss_pred             hcCCccccc--cccCCCcceEeeeeceEEEEEcCCC---cchh-----hhhhhcCCe--EEEeCCCCChHHHHHHHHHHh
Q 011397           97 MTPEKAKTS--ITTFPSSAEIVPEPFGVVLIISPWN---YPFF-----VGAIAAGNA--LVLKPSEVAPASSSLLAKLVG  164 (487)
Q Consensus        97 ~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~-----~~ALaaGN~--Vvlkps~~~~~~~~~l~~~l~  164 (487)
                      ...+.....  ....+.....++.|+--|++..|.-   ||-.     +||-.+|..  |+.-|.+........|+.+-.
T Consensus       105 h~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l  184 (423)
T 4gic_A          105 AERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYI  184 (423)
T ss_dssp             HHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHH
T ss_pred             HHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHh
Confidence            322221111  1122345667889999999999944   6655     999999995  334454332222222222111


Q ss_pred             hhcCCCcEEEEe-CChHhHHHHHh----CC-CCeEEEecCHHHHHHHHHHHhccccceeee-cCCCCc--EEEcCCCCHH
Q 011397          165 EYMDLSSIRVVE-GAVAETSALLD----QK-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP--VVFDSGINLK  235 (487)
Q Consensus       165 ~alP~g~v~~v~-g~~~~~~~L~~----~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e-~gG~~p--~iV~~daDl~  235 (487)
                          .|+=.+.. |+.....+|.-    -+ ||.|+=.|..=+..+=.....    .|-.. ..|.+=  +|-|++||.+
T Consensus       185 ----~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g----~VgIDm~AGPSEilViAD~~a~p~  256 (423)
T 4gic_A          185 ----SGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG----QVGIDMVAGPSEILVISDGRTDPD  256 (423)
T ss_dssp             ----HTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT----TBEECCCCCCCEEEEEECSCSCHH
T ss_pred             ----cCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC----CcCcccccccceEEEEeCCCCCHH
Confidence                12222332 34444455542    23 999998887654332111111    12122 235554  4446668999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCC
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG  315 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~  315 (487)
                      ..+..++.-+= .+.     ..+.++|..+  ++|.+++.+.+.+....          +..   .+...+-++.   .+
T Consensus       257 ~vAaDLlsQAE-Hd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~----------l~r---~~i~~~sl~~---~g  312 (423)
T 4gic_A          257 WIAMDLFSQAE-HDE-----DAQAILISPD--AAHLEAVQASIERLLPG----------MER---AEVIRTSLER---RG  312 (423)
T ss_dssp             HHHHHHHHHHT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGG----------CTT---HHHHHHHHHH---HC
T ss_pred             HHHHHHHHhhc-cCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhh----------Ccc---HHHHHHHHhc---Cc
Confidence            99988887765 322     2345677666  45666666655543211          111   1112222211   01


Q ss_pred             eEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc
Q 011397          316 KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV  395 (487)
Q Consensus       316 ~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~  395 (487)
                                                             .++.++|++|+++++|..-.- -.-|.++|..   .+..++
T Consensus       313 ---------------------------------------~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i  349 (423)
T 4gic_A          313 ---------------------------------------GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESI  349 (423)
T ss_dssp             ---------------------------------------EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGC
T ss_pred             ---------------------------------------eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhC
Confidence                                                   124568999999999995333 4567888875   567777


Q ss_pred             -ceeeEEEcCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEE
Q 011397          396 -SAGGLVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV  442 (487)
Q Consensus       396 -~~g~v~iN~~~~~~-------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v  442 (487)
                       ++|.|++..++.-.       .++.+|-+     |..++.+.-+.+.|..+-++
T Consensus       350 ~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s~  399 (423)
T 4gic_A          350 RNAGAIFMGRYTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSSL  399 (423)
T ss_dssp             CCCSEEEEC----------------CCCCT-----TGGGTCCCCCGGGGEEEEEE
T ss_pred             cEeceeecCCCCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeeeE
Confidence             48999998754211       23445544     55677777778888766554

>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A

Probab=96.19  E-value=1.2  Score=44.39  Aligned_cols=323  Identities=18%  Similarity=0.197  Sum_probs=176.3

Q ss_pred             HHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCC----cchhhHHHHHHH--------HHHHHHHHHHHhhhhcCCcccc-c
Q 011397           39 GWRVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKT-S  105 (487)
Q Consensus        39 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~~a~~~ev~~~--------~~~l~~~~~~~~~~~~~~~~~~-~  105 (487)
                      .+-.+..+.+.+.++++.|+=...-++..-+.    +.-.. .|+..+        .+.|+...++++.+...+.... .
T Consensus        30 ~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~-~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~~~~  108 (434)
T 1kae_A           30 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSA-EEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD  108 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCCH-HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred             HHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccCH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence            45556677777777777776555555444221    11111 344333        3445556666666554443221 1


Q ss_pred             c-ccCCCcceEeeeeceEEEEEcCC---Ccchh-----hhhhhcCCeE--EEeCCCCChHHHHHHHHHHhhhcCCCcEEE
Q 011397          106 I-TTFPSSAEIVPEPFGVVLIISPW---NYPFF-----VGAIAAGNAL--VLKPSEVAPASSSLLAKLVGEYMDLSSIRV  174 (487)
Q Consensus       106 ~-~~~~~~~~~~~~P~GVv~~i~p~---n~P~~-----~~ALaaGN~V--vlkps~~~~~~~~~l~~~l~~alP~g~v~~  174 (487)
                      . ...+.....+..|+--|++..|.   -||-.     +||-.+|+.=  ++-|+.-.|.+   |+.+-    -.|+=.+
T Consensus       109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM~aiPAkVAGV~~Iv~~tPp~i~p~i---L~AA~----l~Gv~eI  181 (434)
T 1kae_A          109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADEI---LYAAQ----LCGVQDV  181 (434)
T ss_dssp             EEEETTEEEEEEEEECSEEEEECCCSSSCCTHHHHHHHHHHHHHTCSEEEEEECSSCCHHH---HHHHH----HTTCCEE
T ss_pred             EEecCCcEEEEEEeehheEEEEecCCCCCchhHHHHhhccHhhcCCCeEEEECCCCCCHHH---HHHHH----HcCCCEE
Confidence            1 11233566788999999999995   35544     8999999843  34454222222   22111    1122223


Q ss_pred             Ee-CChHhHHHHH---hC-C-CCeEEEecCHHHHHHHHHHHhccccceeee-cCCCCc--EEEcCCCCHHHHHHHHHHHh
Q 011397          175 VE-GAVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLE-LGGKSP--VVFDSGINLKVACRRMIMGK  245 (487)
Q Consensus       175 v~-g~~~~~~~L~---~~-~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e-~gG~~p--~iV~~daDl~~aa~~i~~~~  245 (487)
                      .. |+.....+|.   +. + ||.|+=.|..=+..+=..-....+ .|-.. ..|.+=  +|-|++||.+..+..++.-+
T Consensus       182 y~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G-~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQA  260 (434)
T 1kae_A          182 FNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQA  260 (434)
T ss_dssp             EECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred             eecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcC-ccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence            32 3444445554   12 3 999988887654321111100011 12122 235554  44466799999998888766


Q ss_pred             cccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCC
Q 011397          246 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK  325 (487)
Q Consensus       246 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~  325 (487)
                      = .+.     ..+.++|..+  +++.+++.+.+.+....          +..   .    +.++.+.             
T Consensus       261 E-Hd~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~----------lpr---~----~ia~~sl-------------  302 (434)
T 1kae_A          261 E-HGP-----DSQVILLTPA--ADMARRVAEAVERQLAE----------LPR---A----ETARQAL-------------  302 (434)
T ss_dssp             T-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHHTT----------CTT---H----HHHHHHH-------------
T ss_pred             c-cCC-----CCcEEEEECC--HHHHHHHHHHHHHHHHh----------CCh---H----HHHHHHH-------------
Confidence            4 322     2345666665  45666665555432111          001   1    1111111             


Q ss_pred             CCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-ceeeEEEcC
Q 011397          326 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAGGLVIND  404 (487)
Q Consensus       326 ~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~-~~g~v~iN~  404 (487)
                                               ..- .++.++|++||++++|..-.- -.-|.++|..   .+..++ ++|.|++..
T Consensus       303 -------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~  352 (434)
T 1kae_A          303 -------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGD  352 (434)
T ss_dssp             -------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEEST
T ss_pred             -------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCC
Confidence                                     112 346679999999999995433 4678899984   666777 589999997


Q ss_pred             Cccc-------cCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          405 TAVH-------LAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       405 ~~~~-------~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      ++.-       ..|+.+|-+     |..++.+.-+.+.|.++-++.
T Consensus       353 ~tpe~~GDY~aG~NHvLPT~-----G~AR~~sgLsV~~F~K~~s~~  393 (434)
T 1kae_A          353 WSPESAGDYASGTNHVLPTY-----GYTATCSSLGLADFQKRMTVQ  393 (434)
T ss_dssp             TCCHHHHHHTSSSCCCCCCT-----TGGGTCCCSCGGGGEEEEEEE
T ss_pred             CCchhhcccccCCCcccCCC-----CceeccCCCcHHhccceeeEE
Confidence            5421       135666665     456667777788887765543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	487
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-94
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	9e-86
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	5e-84
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-80
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	4e-70
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	1e-59
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-58
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	4e-48
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	2e-23
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	8e-16
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	4e-12

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  290 bits (743), Expect = 4e-94
 Identities = 204/445 (45%), Positives = 283/445 (63%), Gaps = 13/445 (2%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
           VK  R  F SGKT+S  +R+ QL++L +M+NE    I  AL  DL K E  S   EVA +
Sbjct: 6   VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 65

Query: 83  KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF------FVG 136
              + + +KEL  W   E    +  T      I  EP GVVL+I  WNYPF       VG
Sbjct: 66  LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 125

Query: 137 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 196
           A+AAGNA++LKPSEV+   + LLA L+ +YMD +   VV+G V ET+ LL +++D I YT
Sbjct: 126 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 185

Query: 197 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 256
           G++ V +IVMAAAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++
Sbjct: 186 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 244

Query: 257 PDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 316
           PD+I+       +++E LK  L++FYG++  +S+D  RI+N  HF R+  L+D+ KV   
Sbjct: 245 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKV--- 301

Query: 317 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 376
             HGG  D++   IAPT+L+DV   S +M EEIFGP++PI+ V  +E++   IN   KPL
Sbjct: 302 -AHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 360

Query: 377 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           A Y+F+NN+K+ ++ +   S+GG+  ND  VH+ V +LPFGGV  SGMGAYHGK SF+ F
Sbjct: 361 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETF 420

Query: 437 SHKKAVLSRGFIGDVP--VRYPPYT 459
           SH+++ L +  + +     RYPP  
Sbjct: 421 SHRRSCLVKSLLNEEAHKARYPPSP 445

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  270 bits (691), Expect = 9e-86
 Identities = 104/443 (23%), Positives = 177/443 (39%), Gaps = 18/443 (4%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           D + A    +      +  +      R   L  L  ++      +      D  KP + S
Sbjct: 52  DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS 111

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF- 133
            + ++ +    +   L+    W      KT        +    EP GV   I PWN+P  
Sbjct: 112 YLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 167

Query: 134 -----FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 186
                   A+A GN +V+K +E  P ++  +A L+ E       + +V G      A + 
Sbjct: 168 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 227

Query: 187 -DQKWDKICYTGNSRVARIVM-AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 244
             +  DK+ +TG++ + R++  AA + +L  V LELGGKSP +  S  ++  A  +    
Sbjct: 228 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 287

Query: 245 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARL 304
            +      +C      +    Y   +  S+        G       +    V+   F ++
Sbjct: 288 LFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 347

Query: 305 SKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 362
              ++  K  G K++ GG    ++   I PT+  DV     I  EEIFGP++ IL    I
Sbjct: 348 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 407

Query: 363 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 422
           E+     N+ T  LAA +FT +        + + AG + +N   V  A    PFGG + S
Sbjct: 408 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA--QSPFGGYKMS 465

Query: 423 GMGAYHGKFSFDVFSHKKAVLSR 445
           G G   G++    ++  K V  +
Sbjct: 466 GSGRELGEYGLQAYTEVKTVTVK 488

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  265 bits (679), Expect = 5e-84
 Identities = 100/444 (22%), Positives = 180/444 (40%), Gaps = 20/444 (4%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           D + A    ++     +  +T     R   L  L  ++      +      +  K    +
Sbjct: 52  DVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNA 111

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF- 133
            + ++     +++        W    + +T             EP GV   I PWN+P  
Sbjct: 112 YLMDLGGCIKTLRYC----AGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLL 167

Query: 134 -----FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 186
                   A++ GN +V+KP+E  P ++  +  L+ E       + +V G      A + 
Sbjct: 168 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAIS 227

Query: 187 -DQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 244
                DK+ +TG++ V +++  AA K +L  V LELGGKSP +  +  +L  A      G
Sbjct: 228 SHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQG 287

Query: 245 KWGCNNGQACISPDHIITTKDYAPKLLE-SLKNELENFYGKNPLESKDLSRIVNSNHFAR 303
            +  + GQ CI+   +   +    + +  S++   +   G            ++   + +
Sbjct: 288 VFY-HQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEK 346

Query: 304 LSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 361
           +  L++  K  G K+  GG    NK   I PT+  DV  D  I  EEIFGP+  I+    
Sbjct: 347 ILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS 406

Query: 362 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQE 421
           ++D     N+    L+A +FTN+          + +G + +N     +     PFGG + 
Sbjct: 407 LDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCY--SVVSAQCPFGGFKM 464

Query: 422 SGMGAYHGKFSFDVFSHKKAVLSR 445
           SG G   G++ F  ++  K V  +
Sbjct: 465 SGNGRELGEYGFHEYTEVKTVTIK 488

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  256 bits (656), Expect = 2e-80
 Identities = 110/455 (24%), Positives = 190/455 (41%), Gaps = 30/455 (6%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           + + A   V+  +  +      +   R   +    +++ ER  +I      +  K   E+
Sbjct: 59  EVDQA---VQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA 115

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF- 133
                A  +                   +       + A    EP GV   I  WNYPF 
Sbjct: 116 EYDIDAAWQCIEYY-----AGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFM 170

Query: 134 -----FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL- 186
                   A+A GNA+V KPS + P +  +LA++  E  + +  + VV+G     S L  
Sbjct: 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCH 230

Query: 187 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 246
                K+ +TG+    + VM  +AK +  V LELGGKSP++      L+ A R  +M  +
Sbjct: 231 HPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF 290

Query: 247 GCNNGQACISPDHIITTKDYAPKLLESLKNELENF-YGKNPLESKDLSRIVNSNHFARLS 305
               GQ C +   +   ++  P+ LE +    +    G   L    +  +++     ++ 
Sbjct: 291 LTQ-GQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVL 349

Query: 306 KLLDDDKVSG-KIVHGGER-------DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPIL 357
             +   K  G +++ GGE         KN   ++P +L +   D   + EEIFGP++ +L
Sbjct: 350 GFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409

Query: 358 TVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFG 417
             D  E+     N+ T  LA+ +FT +     +    + AG   IN     ++   +PFG
Sbjct: 410 PFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINT--YSISPVEVPFG 467

Query: 418 GVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVP 452
           G + SG G  +G+ + D +S  K V+    +GDV 
Sbjct: 468 GYKMSGFGRENGQATVDYYSQLKTVIVE--MGDVD 500

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  228 bits (583), Expect = 4e-70
 Identities = 102/443 (23%), Positives = 181/443 (40%), Gaps = 21/443 (4%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
             +AA   V+     FA     +   R   L  L  ++ E      +   ++  KP   +
Sbjct: 40  QVDAA---VRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSA 96

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF- 133
              E+  +    +                        ++ I  +P GVV  I+PWNYP  
Sbjct: 97  FNDEIPAIVDVFR---FFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLM 153

Query: 134 -----FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL-- 186
                   A+AAGN +VLKPSE+ P ++  LA+L  +      + ++ G        L  
Sbjct: 154 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTG 213

Query: 187 DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKW 246
             K   +  TG+      +++  A  +    +ELGGK+PV+     +++     +    +
Sbjct: 214 HPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY 273

Query: 247 GCNNGQACISPDHIITTKDYAPKLLESLKNELENFY-GKNPLESKDLSRIVNSNHFARLS 305
             N GQ C +   I   K     L+E L   +     G    ES +L  + +  H  R+ 
Sbjct: 274 -YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVG 332

Query: 306 KLLDDDKVSG--KIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKI 362
           K +++ K +G  K++ GGE+ K N    APTLL    +D  I+ +E+FGP++ +   D  
Sbjct: 333 KAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 392

Query: 363 EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQES 422
           E   +  N     LA+ ++T +     +    +  G   +N   +   V  +P GG + S
Sbjct: 393 EQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLS 450

Query: 423 GMGAYHGKFSFDVFSHKKAVLSR 445
           G G     +  + ++  + V+ +
Sbjct: 451 GYGKDMSLYGLEDYTVVRHVMVK 473

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  202 bits (513), Expect = 1e-59
 Identities = 95/446 (21%), Positives = 173/446 (38%), Gaps = 20/446 (4%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           +AEAA   ++     F + K      R   L     ++  R+ ++   L  ++ K  +E+
Sbjct: 75  EAEAA---LEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA 131

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF 134
           S      +      A +    +  P           + +  VP   GVV+    +    F
Sbjct: 132 SADVAEAIDFIEYYA-RAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIF 190

Query: 135 VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS-----IRVVEGAVAETSALL--D 187
            G I    A+           + ++   V E    +      +  + G   E  A L   
Sbjct: 191 TGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEH 250

Query: 188 QKWDKICYTGNSRVARIVMAAA------AKHLTPVLLELGGKSPVVFDSGINLKVACRRM 241
            +   I +TG+  V   +  AA              +E GGK+ ++ D   +  +A   +
Sbjct: 251 PRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGV 310

Query: 242 IMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHF 301
           ++  +G   GQ C +   +I T+     +LE +    E        E+ DL  +V++   
Sbjct: 311 VVSAYGFQ-GQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQE 369

Query: 302 ARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVD 360
            ++   ++  K  G++V GG+R + +   IAPT+  +VP  + I  EEIFGP+L ++ V 
Sbjct: 370 RKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429

Query: 361 KIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQ 420
              ++ ++ N     L   +++  ++  +        G L  N       V   PFGG +
Sbjct: 430 DFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFK 489

Query: 421 ESGMGAYHGKFSF-DVFSHKKAVLSR 445
            SG  A  G   +  +F   KAV  R
Sbjct: 490 LSGTNAKTGALDYLRLFLEMKAVAER 515

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  198 bits (504), Expect = 2e-58
 Identities = 99/439 (22%), Positives = 183/439 (41%), Gaps = 18/439 (4%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           + +         +    + +  SY  R + L  +  +L   +  I   L +++ K    +
Sbjct: 40  EVDYV---YASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA 96

Query: 75  SIYEVALLKT-SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF 133
               V   +  +  +           E       +    A +  EP G+VL ISP+NYP 
Sbjct: 97  VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 156

Query: 134 ------FVGAIAAGNALVLKPSEVAPASSSLLAKLVGE-YMDLSSIRVVEGAVAETSALL 186
                    A+ AGN +  KP      S  LLA+   E  +       + G  +E    +
Sbjct: 157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 216

Query: 187 --DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 244
              Q  + I +TG++ +   +   A   + P++LELGGK   +     +L++  + +I G
Sbjct: 217 VEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAG 274

Query: 245 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARL 304
            +G  +GQ C +   ++  +  A +L+E ++ ++      NP +  D++ ++++     +
Sbjct: 275 AFG-YSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYV 333

Query: 305 SKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIED 364
             L  +D          E  +    I P L   V  D  +  EE FGP+LPI+ V  +E+
Sbjct: 334 EGL-INDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEE 392

Query: 365 SFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGM 424
           + +I N     L A +FTN+        E +  G + IN+        + PF G ++SG 
Sbjct: 393 AIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQR-GTDNFPFLGAKKSGA 451

Query: 425 GAYHGKFSFDVFSHKKAVL 443
           G    K+S +  +  K+V+
Sbjct: 452 GIQGVKYSIEAMTTVKSVV 470

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  170 bits (432), Expect = 4e-48
 Identities = 73/442 (16%), Positives = 155/442 (35%), Gaps = 16/442 (3%)

Query: 15  DAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELE 73
           + E     +  L      S +      R++ L+    ++        + L  +  KP+  
Sbjct: 53  EVERT---LDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA 109

Query: 74  SSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPF 133
           +     A +     + L   K          +  T  +   +  EP GVV  I+P+NYP 
Sbjct: 110 AVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPL 169

Query: 134 FVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM------DLSSIRVVEGAVAETSALLD 187
           F        + +   + V   S S                       +     + +  + 
Sbjct: 170 FDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIV 229

Query: 188 QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWG 247
                   +                +   ++ELGG  P +     +L +A  ++  G + 
Sbjct: 230 ADDRVAAVSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYS 289

Query: 248 CNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSK 306
              GQ C +   ++  +    KL+E +   L +    +P   + D+  +++ +    +  
Sbjct: 290 -YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMA 348

Query: 307 LLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIE 363
            ++D    G  V  G R      + PTL+       +D ++   E+F P+   + V  ++
Sbjct: 349 AIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLD 408

Query: 364 DSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESG 423
            + ++ N     L A +F  +    ++ V  +  G + IND   H  +   PFGG ++SG
Sbjct: 409 QAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRH-GIGYYPFGGRKKSG 467

Query: 424 MGAYHGKFSFDVFSHKKAVLSR 445
           +      ++ +  +  K ++  
Sbjct: 468 VFREGIGYAVEAVTAYKTIVFN 489

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 99.7 bits (247), Expect = 2e-23
 Identities = 63/453 (13%), Positives = 138/453 (30%), Gaps = 67/453 (14%)

Query: 23  VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPEL----ESSIYE 78
            K++R  +   +  +   +   +K + + L+ER  +I++A R D++K       ES +  
Sbjct: 7   AKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDR 66

Query: 79  VALLKTSIKSA---LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFV 135
           +AL    I       + +     P               I      +  I   +     V
Sbjct: 67  LALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNV 126

Query: 136 G------AIAAGNALVLKPSEVAPASSSL----LAKLVGEYMDLSSIRVVEGAVAETSAL 185
                  A+ +GN ++L+    A  S+      + + + E     S          +  L
Sbjct: 127 TVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVL 186

Query: 186 LDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 245
              +  +       R    +++    + T  +LE G  +  +F            +I+  
Sbjct: 187 EMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINA 246

Query: 246 WGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLS 305
                G    +   ++  K       +     +     K+ +E +   +           
Sbjct: 247 KTQRPGTCNAAEKLLVHEKIA-----KEFLPVIVEELRKHGVEVRGCEKT---------- 291

Query: 306 KLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDS 365
                 ++   +V   E D                       E    ++ I  V  ++++
Sbjct: 292 -----REIVPDVVPATEDD--------------------WPTEYLDLIIAIKVVKNVDEA 326

Query: 366 FDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMG 425
            + I   +   +  + T N    ++FV  + A  + +N +          FG   E G+ 
Sbjct: 327 IEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGA--EIGIS 384

Query: 426 A----YHGKFSFDVFSHKKAVLSRGFIGDVPVR 454
                  G       +  K V+    +G+  VR
Sbjct: 385 TQRFHARGPVGLRELTTYKFVV----LGEYHVR 413

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score = 77.5 bits (189), Expect = 8e-16
 Identities = 59/455 (12%), Positives = 126/455 (27%), Gaps = 45/455 (9%)

Query: 15  DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
           +   A              +  +   R S L+++   L  R  DI+     +   PE+  
Sbjct: 27  EVNQA---ATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRL 83

Query: 75  SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPW 129
           +  E+A     ++     +      +    +     +              G V +    
Sbjct: 84  TG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGAS 142

Query: 130 NYPFF--------VGAIAAGNALVLKPSEVAPASSSLLAKLV-------GEYMDLSSIRV 174
           N+P            A+AAG  +++K     P +S ++A+ +            + ++  
Sbjct: 143 NFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQ 202

Query: 175 VEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG--- 231
                   + +   +   + +TG+    R +   A +   P+       +          
Sbjct: 203 GNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSA 262

Query: 232 -INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESK 290
                    + +                                  E      +    S 
Sbjct: 263 MRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQA-----FIETAQSLIRQQSPST 317

Query: 291 DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIF 350
            L+  +  ++ +++     DD +                   +   +  R      EEIF
Sbjct: 318 LLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSS--ENWRKHPAWEEEIF 375

Query: 351 GPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ--QFVETV--SAGGLVIND-- 404
           GP   I+  + + D   +       L A +    +   Q  Q +  +   AG LV N   
Sbjct: 376 GPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWP 435

Query: 405 TAV---HLAVHSLPFGGVQESGMGAYHGKFSFDVF 436
           T V   +  VH  P+     S   +  G  +   +
Sbjct: 436 TGVEVGYAMVHGGPYPASTHSASTSV-GAEAIHRW 469

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.6 bits (159), Expect = 4e-12
 Identities = 56/384 (14%), Positives = 109/384 (28%), Gaps = 55/384 (14%)

Query: 45  LKSLMKMLNEREPDIVDALRQDLDKPE---LESSIYEVALLKT-----SIKSALKELKHW 96
           L  +   L      I +A + DL   +   L  S+ +   L        +   +K++   
Sbjct: 31  LYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAEL 90

Query: 97  MTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFFVGAIAA------GNALVLKPSE 150
             P               +      V +++  +     V A         GNA +LK  +
Sbjct: 91  EDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGK 150

Query: 151 VAPASSSLLAKLVGEYMDLS-----------SIRVVEGAVAETSALLDQKWDKICYTGNS 199
            +  +   +AK+V + +               +      V++     +     +    N+
Sbjct: 151 ESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNA 210

Query: 200 RVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH 259
            V +I          PVL    G   +  D   +L  A R  +  K   N    C + + 
Sbjct: 211 LVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAK--TNYPAGCNAMET 264

Query: 260 IITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH 319
           ++    ++          LE                            +   K       
Sbjct: 265 LLINPKFSKWWEVLENLTLEG------------------------GVTIHATKDLKTAYF 300

Query: 320 GGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 379
               +  KL  A         +     +E     L    V   E +   IN+ +      
Sbjct: 301 DKLNELGKLTEAIQCKTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDA 360

Query: 380 LFTNNKKLKQQFVETVSAGGLVIN 403
           + T NK   ++F++ V + G+  N
Sbjct: 361 IVTENKANAEKFMKGVDSSGVYWN 384

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	487
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	100.0
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	100.0
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	100.0
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	100.0
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	100.0
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	100.0
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	100.0
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	100.0
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	100.0
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	100.0
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	100.0
d1k75a_	431	L-histidinol dehydrogenase HisD {Escherichia coli	97.33

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=2.1e-91  Score=733.93  Aligned_cols=439  Identities=25%  Similarity=0.366  Sum_probs=411.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      ++|.+++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|+++++.|+|||+.++. .|+..++
T Consensus        45 tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~eela~~~~~etGkp~~ea~-~ev~~~~  123 (503)
T d1a4sa_          45 TGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAW  123 (503)
T ss_dssp             TCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhhcchhhh-hhhhhhh
Confidence            567899999999999999999999999999999999999999999999999999999999999999999999 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.+++++...........    ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       124 ~~l~~~a~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~  199 (503)
T d1a4sa_         124 QCIEYYAGLAPTLSGQHI----QLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV  199 (503)
T ss_dssp             HHHHHHHHHGGGCCEEEE----ECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred             hccccccccccccccccc----ccCCCcccccccccceeeecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence            999999887665432211    11223468899999999999999999998      88999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      ++++++.++ +|+|++|+|+|+.+.++.|++|+ ||.|.||||+++|+.|++.+++++||+++|+|||||+||++|||+|
T Consensus       200 ~l~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~  279 (503)
T d1a4sa_         200 ILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELE  279 (503)
T ss_dssp             HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHH
T ss_pred             HHHHHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCcEEEECCCcCcEEECCCccHH
Confidence            999999998 99999999999889999999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| .|+||.|++++++|||++++++|++++.+.++++++|+|.+ .+++||++++.+++++.++++++.. 
T Consensus       280 ~a~~~i~~~~~-~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~  358 (503)
T d1a4sa_         280 NAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE  358 (503)
T ss_dssp             HHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhhhcchh-ccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHc
Confidence            99999999999 99999999999999999999999999999999999999988 8999999999999999999999974 


Q ss_pred             CCeEeeCCccC-------CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHH
Q 011397          314 SGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK  386 (487)
Q Consensus       314 ~~~~~~gg~~~-------~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~  386 (487)
                      ++++++||...       ..|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|+++|||++||||+|.+
T Consensus       359 Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~  438 (503)
T d1a4sa_         359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS  438 (503)
T ss_dssp             TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred             CCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence            78999998642       36899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCCCCC
Q 011397          387 LKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD  450 (487)
Q Consensus       387 ~~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~  450 (487)
                      .++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+|+++...++
T Consensus       439 ~~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~  500 (503)
T d1a4sa_         439 RAHRVAANLEAGTCYINTYSI--SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVD  500 (503)
T ss_dssp             HHHHHHHHSCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECCSCCC
T ss_pred             HHHHHHHhCCeeEEEEeCCCC--CCCCCCccCcccCcCCcchHHHHHHHhhCeEEEEEcCCCCC
Confidence            999999999999999999765  35789999999999999999999999999999999875443

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=2e-91  Score=733.93  Aligned_cols=436  Identities=24%  Similarity=0.349  Sum_probs=404.8

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh---hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA   80 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~   80 (487)
                      ++|.+++++.++.+|++.|+++|++||+   .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+.
T Consensus        38 t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~  117 (494)
T d1bxsa_          38 TEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLG  117 (494)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhh
Confidence            5678999999999999999999999996   6999999999999999999999999999999999999999987657889


Q ss_pred             HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      ..++.+++++...+.+.. +..   ........+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.
T Consensus       118 ~~~~~~~~~a~~~~~~~~-~~~---~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~  193 (494)
T d1bxsa_         118 GCIKTLRYCAGWADKIQG-RTI---PMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL  193 (494)
T ss_dssp             HHHHHHHHHHHHGGGCCE-EEE---CCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred             hhhHHHHHHhhhhhhhcc-eee---cCCCCceeEEEEccEEEEEEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChH
Confidence            999999999877665432 211   11223477889999999999999999998      89999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhc-cccceeeecCCCCcEEEcC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDS  230 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~-~~~p~~~e~gG~~p~iV~~  230 (487)
                      ++.++++++.++ +|+|++|+|+|+ .+.++.|++|+ ||.|.||||+.+|+.|++.++. ++||+++|+|||||+||++
T Consensus       194 ~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~  273 (494)
T d1bxsa_         194 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA  273 (494)
T ss_dssp             HHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT
T ss_pred             HHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEECc
Confidence            999999999998 999999999994 56789999997 9999999999999999998875 6899999999999999999


Q ss_pred             CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      |||++.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++++
T Consensus       274 dadl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~  352 (494)
T d1bxsa_         274 DADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIE  352 (494)
T ss_dssp             TSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHH
T ss_pred             CcchhHhHHHHHHHHh-cCCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999988 899999999999999999999


Q ss_pred             HHHc-CCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          310 DDKV-SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      ++++ ++++++||.. ...|+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus       353 ~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~  432 (494)
T d1bxsa_         353 SGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK  432 (494)
T ss_dssp             HHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred             HHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHH
Confidence            9975 6799998875 3568999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus       433 ~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~~  489 (494)
T d1bxsa_         433 AITVSSALQSGTVWVNCYSV--VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI  489 (494)
T ss_dssp             HHHHHHHSCCSEEEESCCCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred             HHHHHHhCCEeEEEEcCCCC--cCCCCCcCccccccCChhhHHHHHHHhcceEEEEEec
Confidence            99999999999999998654  4578999999999999999999999999999998875

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.8e-90  Score=722.11  Aligned_cols=436  Identities=22%  Similarity=0.347  Sum_probs=397.1

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +.|.+++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..++...++..+.
T Consensus        26 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~  105 (474)
T d1wnda_          26 TGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIV  105 (474)
T ss_dssp             TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCChhHhhhccccccc
Confidence            56788999999999999999999999999999999999999999999999999999999999999999999744555555


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      ...+++........ ..  .......+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.
T Consensus       106 ~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~  182 (474)
T d1wnda_         106 DVFRFFAGAARCLN-GL--AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL  182 (474)
T ss_dssp             HHHHHHHHHTTCCE-EE--CBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred             cccccccccccccc-cc--ccccccCCcceEEEEecccceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHH
Confidence            55555443322211 11  11111223467889999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhhcCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHH
Q 011397          158 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK  235 (487)
Q Consensus       158 ~l~~~l~~alP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~  235 (487)
                      ++++++++++|+|++|+|+| +.+.++.|++|+ ||.|.||||+++|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus       183 ~~~~l~~~~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~~~k~~~lElgG~~p~iV~~dad~~  262 (474)
T d1wnda_         183 KLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIE  262 (474)
T ss_dssp             HHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHH
T ss_pred             HHHHHHHHhCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhcCCCeEEEEcCCCCceEEcCchhhh
Confidence            99999999999999999999 457899999997 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHc-
Q 011397          236 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKV-  313 (487)
Q Consensus       236 ~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~-  313 (487)
                      .|++.+++++| +|+||.|++++++|||++++|+|+++|++++++++.|+|.+ ++++||+++..+.+++.+++++++. 
T Consensus       263 ~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~  341 (474)
T d1wnda_         263 AVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKAT  341 (474)
T ss_dssp             HHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             hhhhhhhhhcc-cCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHC
Confidence            99999999999 99999999999999999999999999999999999999988 8999999999999999999999976 


Q ss_pred             CC-eEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          314 SG-KIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       314 ~~-~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      ++ .++.|+... .+|+|+.|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus       342 ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~  421 (474)
T d1wnda_         342 GHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRV  421 (474)
T ss_dssp             SSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred             CCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHH
Confidence            44 566666553 4689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++|+|+||++..  ..+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus       422 ~~~l~~g~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~  473 (474)
T d1wnda_         422 SARLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK  473 (474)
T ss_dssp             HHHCCSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHhCCccEEEEeCCCC--ccCCCCcccccccccCccCHHHHHHHcCCEEEEEEe
Confidence            9999999999999754  467899999999999999999999999999999876

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=1.7e-90  Score=726.46  Aligned_cols=436  Identities=24%  Similarity=0.353  Sum_probs=404.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh---hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA   80 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~   80 (487)
                      ++|.+++++.++.+|+++|+++|++||+   .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+.
T Consensus        38 tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~  117 (494)
T d1o04a_          38 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLD  117 (494)
T ss_dssp             TTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHH
Confidence            4677899999999999999999999995   5999999999999999999999999999999999999999998657999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChH
Q 011397           81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPA  154 (487)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~  154 (487)
                      .+++.+++++.....+.. +..   ....+...+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.
T Consensus       118 ~~~~~~~~~a~~~~~~~~-~~~---~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~  193 (494)
T d1o04a_         118 MVLKCLRYYAGWADKYHG-KTI---PIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL  193 (494)
T ss_dssp             HHHHHHHHHHHHTTTCCE-EEE---CCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred             HHHHHHHHHHHHHHHhcC-cee---ccCCCceeEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcH
Confidence            999999999877665432 111   11223467789999999999999999998      89999999999999999999


Q ss_pred             HHHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh-ccccceeeecCCCCcEEEcC
Q 011397          155 SSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS  230 (487)
Q Consensus       155 ~~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~-~~~~p~~~e~gG~~p~iV~~  230 (487)
                      ++.++.+++.++ +|+|++|+|+|+ .+.++.|+.|+ ||.|.||||+++|+.|++.++ +++||+++|+|||||+||++
T Consensus       194 ~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~  273 (494)
T d1o04a_         194 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS  273 (494)
T ss_dssp             HHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECT
T ss_pred             HHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHHHhhccCCCeEEEECCCcCcEEEcc
Confidence            999999999998 999999999994 57899999997 999999999999999988775 68999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHH
Q 011397          231 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLD  309 (487)
Q Consensus       231 daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~  309 (487)
                      |||+|.|++.+++++| +|+||.|++++++|||++++|+|++++++++..+++|+|.+ .+++||++++.+++++.++++
T Consensus       274 dAdl~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~  352 (494)
T d1o04a_         274 DADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYIN  352 (494)
T ss_dssp             TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred             CccHHHHHHhhhhhcc-ccCcccccccccccccchhhHHHHHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999999998 899999999999999999999


Q ss_pred             HHHc-CCeEeeCCccC-CCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          310 DDKV-SGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       310 ~a~~-~~~~~~gg~~~-~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      ++++ ++++++||... +.|+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus       353 ~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~  432 (494)
T d1o04a_         353 TGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK  432 (494)
T ss_dssp             HHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred             HHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHH
Confidence            9875 67999999764 468999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      ++++++++++|+|+||++..  ..+.+||||+|.||+|+++|.+++++||+.|+|++++
T Consensus       433 ~~~~~~~l~~G~v~iN~~~~--~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~~  489 (494)
T d1o04a_         433 ANYLSQALQAGTVWVNCYDV--FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV  489 (494)
T ss_dssp             HHHHHHHCCSSEEEESCSSC--CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred             HHHHHHhCCeeEEEEcCCCC--CCCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEeC
Confidence            99999999999999998654  4578999999999999999999999999999998874

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.1e-89  Score=723.97  Aligned_cols=438  Identities=23%  Similarity=0.340  Sum_probs=405.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      ++|.+++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..++. .|+..++
T Consensus        61 tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~  139 (516)
T d1uzba_          61 PSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAI  139 (516)
T ss_dssp             EEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred             CCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-hhHHHHH
Confidence            567899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++++++....+.......  ..........+++|+|||++|+|||||+.      ++||++||+||+|||+.+|+++.
T Consensus       140 ~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~  217 (516)
T d1uzba_         140 DFIEYYARAALRYRYPAVEV--VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA  217 (516)
T ss_dssp             HHHHHHHHHHGGGCSSCCCC--CCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred             HHHHHHHHHHHhhhhccccc--ccccccceeEEeeccCccccccccccccccccccccchhhhcccccccccchhHHHHH
Confidence            99999998877654322211  11223356778999999999999999998      89999999999999999999999


Q ss_pred             HHHHHHhhh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHh------ccccceeeecCCCCcEEE
Q 011397          158 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF  228 (487)
Q Consensus       158 ~l~~~l~~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~------~~~~p~~~e~gG~~p~iV  228 (487)
                      ++.+++.++ +|+|++|+|+| +.+.+..|++|+ |+.|.||||+.+|+.|++.++      .++||+++|+|||||+||
T Consensus       218 ~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV  297 (516)
T d1uzba_         218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV  297 (516)
T ss_dssp             HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred             HHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceee
Confidence            999999998 99999999999 567899999997 999999999999999999887      678999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHH
Q 011397          229 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL  308 (487)
Q Consensus       229 ~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i  308 (487)
                      ++|||+|.|++.+++++| .|+||.|++++++|||++++|+|++++.++++++++|+..+++++||+++..+.+++.+++
T Consensus       298 ~~dAd~~~aa~~i~~~~~-~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i  376 (516)
T d1uzba_         298 DETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYI  376 (516)
T ss_dssp             CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHH
T ss_pred             ecchhHHHHHHHHhhhhc-ccCCCcccccCccccccccccchhhHHHHHHHhcccCCCcccCccccccCHHHHHHHHHHH
Confidence            999999999999999999 9999999999999999999999999999999999999544489999999999999999999


Q ss_pred             HHHHcCCeEeeCCcc-CCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          309 DDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       309 ~~a~~~~~~~~gg~~-~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      ++++..|..++||.. +.+|+|+.|||+.++++++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.
T Consensus       377 ~~a~~~Ga~v~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~  456 (516)
T d1uzba_         377 EIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREH  456 (516)
T ss_dssp             HHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred             HHHHHCCCEEECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHH
Confidence            999877777777764 4578999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcch-HHHHHHhhhccEEEEe
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHG-KFSFDVFSHKKAVLSR  445 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g-~~~l~~~~~~k~v~~~  445 (487)
                      ++++++++++|+|+||+++.+...+.+||||+|.||+|+++| .+++++||+.|+|..+
T Consensus       457 ~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~r  515 (516)
T d1uzba_         457 LEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER  515 (516)
T ss_dssp             HHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred             HHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEEc
Confidence            999999999999999998777677899999999999999865 7899999999999864

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.9e-88  Score=697.57  Aligned_cols=435  Identities=46%  Similarity=0.780  Sum_probs=400.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHhhhhc
Q 011397           19 ASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT   98 (487)
Q Consensus        19 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~   98 (487)
                      |++|+++|++||++|+.+|.++|.++|++++++|++|+++|++++++|+||+..++...|+..+++.++++++.+..+.+
T Consensus         2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~   81 (446)
T d1ad3a_           2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE   81 (446)
T ss_dssp             HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            78999999999999999999999999999999999999999999999999999999767999999999999999988876


Q ss_pred             CCccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHHHhhhcCCCcE
Q 011397           99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI  172 (487)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~alP~g~v  172 (487)
                      ...............++.++|+|||++|+|||||+.      ++||++||+||+|||+.+|.++.++++++.+.+|++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~~~~~~~  161 (446)
T d1ad3a_          82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLY  161 (446)
T ss_dssp             CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHSCTTTE
T ss_pred             ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccccccccc
Confidence            654433333344467889999999999999999998      89999999999999999999999999999988999999


Q ss_pred             EEEeCChHhHHHHHhCCCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCCHHHHHHHHHHHhcccCCCC
Q 011397          173 RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQ  252 (487)
Q Consensus       173 ~~v~g~~~~~~~L~~~~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daDl~~aa~~i~~~~~~~~~Gq  252 (487)
                      +++.+.......++.+++|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~-~~~GQ  240 (446)
T d1ad3a_         162 LVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQ  240 (446)
T ss_dssp             EECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH-TTTTC
T ss_pred             ccccccchhhhhhcccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh-cCCCC
Confidence            99998777766676667999999999999999999999999999999999999999999999999999999999 99999


Q ss_pred             ccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHHcCCeEeeCCccCCCCceee
Q 011397          253 ACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIA  331 (487)
Q Consensus       253 ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~gg~~~~~g~~~~  331 (487)
                      .|+++++||||++++|+|+++|.++++.+ +|+|.+ .+++||++++.+.+++..++++    ++...|+..+..++|+.
T Consensus       241 ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~----a~~~~g~~~~~~~~~~~  315 (446)
T d1ad3a_         241 TCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN----QKVAHGGTWDQSSRYIA  315 (446)
T ss_dssp             CTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT----SCEEECCCEETTTTEEC
T ss_pred             ccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc----hhcccceeecCCCCCcC
Confidence            99999999999999999999999999887 677777 8999999999999998887754    44555555566789999


Q ss_pred             cEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcceeeEEEcCCccccCC
Q 011397          332 PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAV  411 (487)
Q Consensus       332 Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~  411 (487)
                      |||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++.+...
T Consensus       316 Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~  395 (446)
T d1ad3a_         316 PTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITV  395 (446)
T ss_dssp             CEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGC
T ss_pred             CEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998777778


Q ss_pred             CCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeCCCCC--CCccCCCCc
Q 011397          412 HSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD--VPVRYPPYT  459 (487)
Q Consensus       412 ~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~~~~~--~~~~~~~~~  459 (487)
                      +.+||||+|.||+|+++|.+|+++||+.|+|++++++.+  ...+||||.
T Consensus       396 ~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~pp~~  445 (446)
T d1ad3a_         396 PTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPPSP  445 (446)
T ss_dssp             TTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECCCCCCCTTGGGSSSCC
T ss_pred             CCCCccccccceeccchHHHHHHHHhceeEEEEccCCCCccccccCCCCC
Confidence            999999999999999999999999999999999886654  457899984

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=100.00  E-value=4.9e-83  Score=671.34  Aligned_cols=437  Identities=21%  Similarity=0.329  Sum_probs=395.6

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhh-hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.|.+++++.++.+|+++|+++|++|++ .|+.+|.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+
T Consensus        39 t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~etGk~~~~a~-~Ev~~~  117 (499)
T d1ky8a_          39 DLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAA  117 (499)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHh-hhhhcc
Confidence            4677999999999999999999988887 79999999999999999999999999999999999999999998 899999


Q ss_pred             HHHHHHHHHHHhhhhcCCcccc-ccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           83 KTSIKSALKELKHWMTPEKAKT-SITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      ++.+++++..++++........ .........+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       118 i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~  197 (499)
T d1ky8a_         118 VDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLP  197 (499)
T ss_dssp             HHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHH
T ss_pred             cccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhhcchhhhcccccccccccccchhh
Confidence            9999999877765432221111 111122367789999999999999999998      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN  233 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~daD  233 (487)
                      +..+.+++.++ +|.++++++.++.+.+..|+.|+ ++.+.||||+..++.+.+.+.  .+|+++|+|||||+||++|||
T Consensus       198 ~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~~~~~--~~~~~lElgG~np~iV~~dAd  275 (499)
T d1ky8a_         198 AAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDAD  275 (499)
T ss_dssp             HHHHHHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSC
T ss_pred             hhhhccccccccccceeeecccCChHHHHHHhhccceeEEEeecccccceEEeeccc--ccceEEecCCCCeEEEcCCcC
Confidence            99999999998 89999999998888899999996 999999999999999988764  589999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCC-CCcccccCCHHHHHHHHHHHHHHH
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      +|.|++.+++++| +|+||.|+++++||||++++|+|+++|+++++++++|+|.+ ++++||+++..+.+++++++++++
T Consensus       276 l~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~  354 (499)
T d1ky8a_         276 LDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAV  354 (499)
T ss_dssp             HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhh-ccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHH
Confidence            9999999999999 99999999999999999999999999999999999999998 899999999999999999999997


Q ss_pred             c-CCeEeeCCccCCCCceeecEEE---ecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHH
Q 011397          313 V-SGKIVHGGERDKNKLRIAPTLL---LDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK  388 (487)
Q Consensus       313 ~-~~~~~~gg~~~~~g~~~~Ptv~---~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~  388 (487)
                      . +++++.||..... .+..++++   .++.+||++++||+||||++|++|+|.+||++++|++++||++||||+|.+.+
T Consensus       355 ~~ga~v~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~  433 (499)
T d1ky8a_         355 EKGGRVLAGGRRLGP-TYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKI  433 (499)
T ss_dssp             HTTCEEEECCCEEET-TEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHH
T ss_pred             HcCCEEeeeeccccc-cccccccccccccCCCCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHH
Confidence            5 6788988876433 33333333   35567999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEeC
Q 011397          389 QQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRG  446 (487)
Q Consensus       389 ~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~~  446 (487)
                      +++++++++|+|+||+++.+ ..+.+||||+|.||+|+++|.+|+++||+.|+|++++
T Consensus       434 ~~~~~~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~  490 (499)
T d1ky8a_         434 RRAVRLLEVGAIYINDMPRH-GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY  490 (499)
T ss_dssp             HHHHHHCCSSEEEETSCCCC-TTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred             HHHHHhCCEeEEEEeCCCCC-CCCCCCccccccCcCCCCCHHHHHHHhhCEEEEEEcC
Confidence            99999999999999998764 4688999999999999999999999999999999875

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=1.4e-80  Score=650.00  Aligned_cols=435  Identities=23%  Similarity=0.350  Sum_probs=396.2

Q ss_pred             cchhhccccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHHH
Q 011397            4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK   83 (487)
Q Consensus         4 ~~~~~~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~   83 (487)
                      +++.+++++.++.+|+++|+++|++|++.|+.+|.++|.++|+++++.|.+++++|++++++|+|||..++. .|+...+
T Consensus        26 tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~la~~~~~e~Gk~~~~a~-~e~~~~~  104 (474)
T d1euha_          26 SGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTA  104 (474)
T ss_dssp             TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcchhc-cccchhH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999998 8999999


Q ss_pred             HHHHHHHHHHhhhhcCCcccc--ccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHH
Q 011397           84 TSIKSALKELKHWMTPEKAKT--SITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPAS  155 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~  155 (487)
                      ..++++...............  .........+++++|+|||++|+|||||+.      ++||++||+||+|||+.+|.+
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~  184 (474)
T d1euha_         105 EIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSIS  184 (474)
T ss_dssp             HHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHH
T ss_pred             HHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhhhchhhhhccccceecccccchHH
Confidence            999988776654432211111  111222356788999999999999999998      899999999999999999999


Q ss_pred             HHHHHHHHhhh-cCCCcEEEEeCC-hHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEEEcCCC
Q 011397          156 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI  232 (487)
Q Consensus       156 ~~~l~~~l~~a-lP~g~v~~v~g~-~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~iV~~da  232 (487)
                      +.++.+++.++ +|+|++|+|+|+ .+.++.|+.|+ ++.|.||||+.+++.+.+.++  .+|+++|+||+||+||++||
T Consensus       185 ~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~a~--~k~~~~e~gG~~~~iV~~dA  262 (474)
T d1euha_         185 GLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDA  262 (474)
T ss_dssp             HHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEECTTS
T ss_pred             HHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhhcc--cceEEEecCCcceEEEECCC
Confidence            99999999998 999999999995 67889999997 999999999999999988765  68999999999999999999


Q ss_pred             CHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 011397          233 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK  312 (487)
Q Consensus       233 Dl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~  312 (487)
                      |++.|++.+++++| +++||.|+++++||||++++++|++.++++...++.+++.+...++|.+.....+++.+.+..+.
T Consensus       263 dl~~aa~~i~~~~~-~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (474)
T d1euha_         263 DLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDAN  341 (474)
T ss_dssp             CHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHh-hCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcccccccccccchHHHHHHHHHHHhhh
Confidence            99999999999999 99999999999999999999999999999999999999988778999999999999999998876


Q ss_pred             c-CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHH
Q 011397          313 V-SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF  391 (487)
Q Consensus       313 ~-~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~  391 (487)
                      . ++..+.++.  ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++++||+++|||+|.+.++++
T Consensus       342 ~~~~~~~~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~  419 (474)
T d1euha_         342 DKGATALTEIK--REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGI  419 (474)
T ss_dssp             HTTCEECSCCC--EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHH
T ss_pred             cccccccccCC--CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHH
Confidence            4 445544332  3689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcceeeEEEcCCccccCCCCCCcccCCCCCCCCcchHHHHHHhhhccEEEEe
Q 011397          392 VETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSR  445 (487)
Q Consensus       392 ~~~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~~~  445 (487)
                      ++++++|+|+||+++.+ ..+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus       420 ~~~l~~g~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  472 (474)
T d1euha_         420 AEQLEVGTVHINNKTQR-GTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD  472 (474)
T ss_dssp             HHHSCSSEEEESSCCCC-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             HHhCCEEEEEEECCCCC-CCCCCCccccccCccCccCHHHHHHHhCcEEEEEEe
Confidence            99999999999997643 578899999999999999999999999999999864

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=100.00  E-value=3.8e-74  Score=602.83  Aligned_cols=424  Identities=17%  Similarity=0.217  Sum_probs=351.7

Q ss_pred             cchhhc-cccCCCHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 011397            4 EEETKK-KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL   82 (487)
Q Consensus         4 ~~~~~~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~   82 (487)
                      +.|.++ .+|.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..++. .|+..+
T Consensus        12 tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~a~-~Ev~~~   90 (504)
T d1ez0a_          12 TGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIART   90 (504)
T ss_dssp             TSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred             CCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence            445555 799999999999999999999999999999999999999999999999999999999999999998 899999


Q ss_pred             HHHHHHHHHHHhhhhcCCccccc-----cccCCCcceEeeeeceEEEEEcCCCcchh--------hhhhhcCCeEEEeCC
Q 011397           83 KTSIKSALKELKHWMTPEKAKTS-----ITTFPSSAEIVPEPFGVVLIISPWNYPFF--------VGAIAAGNALVLKPS  149 (487)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~P~GVv~~i~p~n~P~~--------~~ALaaGN~Vvlkps  149 (487)
                      ++.++++++.++++.........     ...........++|+|||++|+|||||+.        ++||++||+||+|||
T Consensus        91 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs  170 (504)
T d1ez0a_          91 ANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGH  170 (504)
T ss_dssp             HHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred             HHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhccceecCc
Confidence            99999999988765433221110     11112356678889999999999999974        788999999999999


Q ss_pred             CCChHHHHHHHHHHh----hh-cCCCcEEEEeC-ChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceee--ec
Q 011397          150 EVAPASSSLLAKLVG----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLL--EL  220 (487)
Q Consensus       150 ~~~~~~~~~l~~~l~----~a-lP~g~v~~v~g-~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~--e~  220 (487)
                      +.+|.++.++.+++.    ++ +|+|++|+|+| +.+.++.|++|+ |+.|.||||+.+|+.|.+.++++++|+.+  |+
T Consensus       171 ~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~~~~~l~~El  250 (504)
T d1ez0a_         171 TAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL  250 (504)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred             ccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcccccccccccc
Confidence            999999887766654    44 89999999999 567889999997 99999999999999999999999887654  99


Q ss_pred             CCCCcEEEcCCCCHHHHH--HHHHHHhcccCCCCccccCCEEEEcCCcH-HHHHHHHHHHHhhhcCCCCCCCCcccccCC
Q 011397          221 GGKSPVVFDSGINLKVAC--RRMIMGKWGCNNGQACISPDHIITTKDYA-PKLLESLKNELENFYGKNPLESKDLSRIVN  297 (487)
Q Consensus       221 gG~~p~iV~~daDl~~aa--~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~  297 (487)
                      |||||+||++|||++.|+  +.++.++| +|+||.|++++++||+++.+ +.|++.+++.++.   ++|  .+.+||+++
T Consensus       251 GGknp~iV~~dAd~~~Aa~~~~~~~~~~-~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~~~--~~~~gp~i~  324 (504)
T d1ez0a_         251 GAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---QSP--STLLTPGIR  324 (504)
T ss_dssp             CCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---CCC--BCCSSHHHH
T ss_pred             cccccccccccccHHHHhhhhccccchh-hccCccccccccccchhhhhHHHHhhhhhhhhhh---ccc--ccccccchh
Confidence            999999999999999875  47899999 99999999999999888865 4666666665543   333  578999998


Q ss_pred             HHHHHHHHHHHHHHHc-CCeEeeCCccCCCCceeecEEEe---cCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCC
Q 011397          298 SNHFARLSKLLDDDKV-SGKIVHGGERDKNKLRIAPTLLL---DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT  373 (487)
Q Consensus       298 ~~~~~~~~~~i~~a~~-~~~~~~gg~~~~~g~~~~Ptv~~---~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~  373 (487)
                      ..+.+++   ++.+.. +..+..||..   +.+..|+++.   ++..++++++||+||||++|++|+|++|||+++|+++
T Consensus       325 ~~~~~~v---i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~  398 (504)
T d1ez0a_         325 DSYQSQV---VSRGSDDGIDVTFSQAE---SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLA  398 (504)
T ss_dssp             HHHHHHH---HHHHTSTTEEEEECCCC---TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCC
T ss_pred             hhhhhhh---hhhhhhhhhhccccccc---ccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCC
Confidence            8877665   444444 4466666543   3344444443   3445788999999999999999999999999999999


Q ss_pred             CCceEEEecC--CHHHHHHHHHhcc--eeeEEEcCCcccc-----CCCCCCcccCCCCCCCCcchHHHHHHhhhccE
Q 011397          374 KPLAAYLFTN--NKKLKQQFVETVS--AGGLVINDTAVHL-----AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKA  441 (487)
Q Consensus       374 ~gl~~~v~t~--d~~~~~~~~~~~~--~g~v~iN~~~~~~-----~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~  441 (487)
                      |||+++|||+  |..++.+++++++  +|+|+||+++++.     ..++.||||.+.||.+ .+|..++++|++..+
T Consensus       399 ~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r~v~  474 (504)
T d1ez0a_         399 GSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGAEAIHRWLRPVA  474 (504)
T ss_dssp             CEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEEEEE
T ss_pred             CCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchHHHHHHHhchhh
Confidence            9999999996  5668999999986  8999999976533     2344689999999955 568999999986543

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1e-61  Score=497.92  Aligned_cols=385  Identities=16%  Similarity=0.172  Sum_probs=294.6

Q ss_pred             HHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcCCCcchhhHHHHH--H---HHHHHHHHHH
Q 011397           17 EAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA--L---LKTSIKSALK   91 (487)
Q Consensus        17 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~--~---~~~~l~~~~~   91 (487)
                      +|+++++++|++||+.|+.+|.++|.++|++++++|++|+++|++++++|+||+..++. .|..  +   ....++..++
T Consensus         1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~-~e~~~~rl~~~~~~i~~~~~   79 (414)
T d1o20a_           1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGV-KESLVDRLALNDKRIDEMIK   79 (414)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTC-CHHHHHHHCCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccc-cHHHHHHHhccHHHHHHHHH
Confidence            37889999999999999999999999999999999999999999999999999988876 4421  1   1122333333


Q ss_pred             HHhhhhcCC---ccccccccCCCcceEeeeeceEEEEEcCCCcchh------hhhhhcCCeEEEeCCCCChHHHHHHHHH
Q 011397           92 ELKHWMTPE---KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF------VGAIAAGNALVLKPSEVAPASSSLLAKL  162 (487)
Q Consensus        92 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~------~~ALaaGN~Vvlkps~~~~~~~~~l~~~  162 (487)
                      .++.+....   ................++|+||++++.|||||+.      ++||++||+||+|||+.+|.++..++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l  159 (414)
T d1o20a_          80 ACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA  159 (414)
T ss_dssp             HHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred             HHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhH
Confidence            333332111   1111111233467788899999999999999988      8999999999999999999999999999


Q ss_pred             Hhhh-c----CCCcEEEEeC-ChHhHHHHHhCC--CCeEEEecCHHHHHHHHHHHhccccceeeecCCCC-cEEEcCCCC
Q 011397          163 VGEY-M----DLSSIRVVEG-AVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKS-PVVFDSGIN  233 (487)
Q Consensus       163 l~~a-l----P~g~v~~v~g-~~~~~~~L~~~~--v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~-p~iV~~daD  233 (487)
                      +.++ .    |.++++.+.+ ..+....++.++  ....+++|    +..+.+.++++.+++++|+||+| ++||++|||
T Consensus       160 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd  235 (414)
T d1o20a_         160 IREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRG----GYGLISFVRDNATVPVLETGVGNCHIFVDESAD  235 (414)
T ss_dssp             HHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECS----CHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSC
T ss_pred             HHhhhhhccccccccccccccchhhhhhcccccccCeEEEccc----HHHHHHHhhhccccceecccCCCCCeecccccc
Confidence            9877 4    4445666665 445566666543  34444444    45566677777788888888766 578889999


Q ss_pred             HHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHc
Q 011397          234 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKV  313 (487)
Q Consensus       234 l~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~  313 (487)
                      ++.|++.++.++| .| ||.|+++++++||+++||+|+++|.+...+..++++.+         +..    ..       
T Consensus       236 ~~~A~~~~~~~~~-~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~---------~~~----~~-------  293 (414)
T d1o20a_         236 LKKAVPVIINAKT-QR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGC---------EKT----RE-------  293 (414)
T ss_dssp             HHHHHHHHHHHHH-SC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEEC---------HHH----HH-------
T ss_pred             hhhhhhHHHhhhh-cC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccc---------hhh----hh-------
Confidence            9999999999988 76 99999999999999999999999999888765443211         100    00       


Q ss_pred             CCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHH
Q 011397          314 SGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE  393 (487)
Q Consensus       314 ~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~  393 (487)
                                      +.+.+...   ....+++|+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++
T Consensus       294 ----------------~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~  354 (414)
T d1o20a_         294 ----------------IVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVS  354 (414)
T ss_dssp             ----------------HSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHH
T ss_pred             ----------------hcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHH
Confidence                            00111111   12357899999999999999999999999999999999999999999999999


Q ss_pred             hcceeeEEEcCCccccCCCCCCcccCCCCCC--CCc--chHHHHHHhhhccEEEEeCCCC
Q 011397          394 TVSAGGLVINDTAVHLAVHSLPFGGVQESGM--GAY--HGKFSFDVFSHKKAVLSRGFIG  449 (487)
Q Consensus       394 ~~~~g~v~iN~~~~~~~~~~~pfGG~~~SG~--g~~--~g~~~l~~~~~~k~v~~~~~~~  449 (487)
                      ++++|.|+||+++.+..  ..|||+.+.+|+  |+.  +|++|+++||+.|+|+++++++
T Consensus       355 ~i~~G~V~IN~~~~~~~--~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~~~~  412 (414)
T d1o20a_         355 EIDAAAVYVNASTRFTD--GGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEYHV  412 (414)
T ss_dssp             HCCSSEEEESSCGGGCS--TTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSSCC
T ss_pred             hCCeeEEEEeCCCcCCC--CCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECCCcc
Confidence            99999999999765433  334544444543  443  3899999999999999887653

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.3e-52  Score=425.51  Aligned_cols=397  Identities=18%  Similarity=0.153  Sum_probs=268.3

Q ss_pred             HHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHh------hcCCCcchhhHH--------HHHHHH
Q 011397           18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQ------DLDKPELESSIY--------EVALLK   83 (487)
Q Consensus        18 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~------e~Gk~~~~a~~~--------ev~~~~   83 (487)
                      .++++++.|++|++.|+.++.++|.++|+++++.|++++++|+++..+      +.|++.  +...        .+...+
T Consensus         4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~--~~idRL~l~~~~ri~~~~   81 (436)
T d1vlua_           4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLAD--SLLKRLDLFKGDKFEVML   81 (436)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCH--HHHHHHCTTSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcH--HHHHHHhcCchHHHHHHH
Confidence            567899999999999999999999999999999999999999886444      445432  2111        122222


Q ss_pred             HHHHHHHHHHhhhhcCC--ccccccccCCCcceEeeeeceEEEEEcCCCcchh----hhhhhcCCeEEEeCCCCChHHHH
Q 011397           84 TSIKSALKELKHWMTPE--KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFF----VGAIAAGNALVLKPSEVAPASSS  157 (487)
Q Consensus        84 ~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~----~~ALaaGN~Vvlkps~~~~~~~~  157 (487)
                      +.++..    ..+.++.  .........+...+..+.|+||+++|.++|.++.    .+||++||+||+||++.++.|+.
T Consensus        82 ~~l~~i----~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI~e~~P~vt~~~~~lalksGNavIlk~~~~a~~s~~  157 (436)
T d1vlua_          82 QGIKDV----AELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFR  157 (436)
T ss_dssp             HHHHHH----HHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSCTHHHHHHHHHHHHHTCEEEEECCGGGHHHHH
T ss_pred             HHHHHH----HhccccceeEeeeeeccccceEEEeeeeeeeeeccccccchhhhhhhhcccccCCcceecCCcccccCHH
Confidence            222222    2222111  1111111223366778899999999955554444    88999999999999999999998


Q ss_pred             HHHHHHh--------hh-cCCCcEEEEeCChHhHHHHHhCC-CCeEEEecCHHHHHHHHHHHhccccceeeecCCCCcEE
Q 011397          158 LLAKLVG--------EY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV  227 (487)
Q Consensus       158 ~l~~~l~--------~a-lP~g~v~~v~g~~~~~~~L~~~~-v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p~i  227 (487)
                      .+.++++        ++ +|+++++++++..+.++.|..|+ ||.|+||||...++.+.+.+.   +|++.++||++|+|
T Consensus       158 ~l~~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~  234 (436)
T d1vlua_         158 EMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIY  234 (436)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEE
T ss_pred             HHHHHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCcccee
Confidence            8887764        33 89999999998778888888886 999999999998887765442   59999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHH
Q 011397          228 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKL  307 (487)
Q Consensus       228 V~~daDl~~aa~~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~  307 (487)
                      |++|||+|+|++.++.++| .+.|| |++.++++||+++++.|...+......-        ..+.  .++.........
T Consensus       235 Vd~~ADl~~A~~~i~~ak~-~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~g--------v~l~--~~~~~~~~~~~~  302 (436)
T d1vlua_         235 LDEDADLIKAKRISLDAKT-NYPAG-CNAMETLLINPKFSKWWEVLENLTLEGG--------VTIH--ATKDLKTAYFDK  302 (436)
T ss_dssp             ECTTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTSTTHHHHHHHHHHHHC--------CCBE--ECHHHHHHHHHH
T ss_pred             ecccccHHHHHHHHHHHhc-cCCCc-cccccceeecHhhhhhhhhhHHHHHhCC--------cEEE--eCHHHHHHhhhh
Confidence            9999999999999999999 88886 8899999999999988865554433321        0010  122211111111


Q ss_pred             HHHHHcCCeEeeCCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHH
Q 011397          308 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL  387 (487)
Q Consensus       308 i~~a~~~~~~~~gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~  387 (487)
                      +..   .+..        .+....|++....+   ..+++|.|+|+++|++++|+||||+++|++++|||++|||+|.+.
T Consensus       303 ~~~---~~~~--------~~~~~~~~~~~~~~---~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~  368 (436)
T d1vlua_         303 LNE---LGKL--------TEAIQCKTVDADEE---QDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKAN  368 (436)
T ss_dssp             HHH---HTCC--------CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHH
T ss_pred             hhh---cccc--------cccccccccCCCcc---cchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHH
Confidence            111   1110        11122233332222   237899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcceeeEEEcCCccccCCCCCCcccC-CCC-CCCCcchHHHHHHhhhccEEEEeCCCC
Q 011397          388 KQQFVETVSAGGLVINDTAVHLAVHSLPFGGV-QES-GMGAYHGKFSFDVFSHKKAVLSRGFIG  449 (487)
Q Consensus       388 ~~~~~~~~~~g~v~iN~~~~~~~~~~~pfGG~-~~S-G~g~~~g~~~l~~~~~~k~v~~~~~~~  449 (487)
                      +++|++++++|.|+||+++.+.....+.||+. |-| +.....|+.|++.+|..|+++....++
T Consensus       369 a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~g~~  432 (436)
T d1vlua_         369 AEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGDGQV  432 (436)
T ss_dssp             HHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECSSCC
T ss_pred             HHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECCCEe
Confidence            99999999999999999886533333445433 222 223347999999999999999887653

>d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: L-histidinol dehydrogenase HisD
domain: L-histidinol dehydrogenase HisD
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.077  Score=50.79  Aligned_cols=331  Identities=17%  Similarity=0.181  Sum_probs=184.0

Q ss_pred             hCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHhhcC-CC---cchhhHHHHHHH--------HHHHHHHHHHHhhhhcC
Q 011397           32 SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLD-KP---ELESSIYEVALL--------KTSIKSALKELKHWMTP   99 (487)
Q Consensus        32 ~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G-k~---~~~a~~~ev~~~--------~~~l~~~~~~~~~~~~~   99 (487)
                      +......+...+..+.+.+.++++.|.=....++..- ..   +.-+. .|+..+        .+.|+..+++++.+...
T Consensus        20 R~~~~~~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~-~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~   98 (431)
T d1k75a_          20 RPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSA-EEIAAASERLSDELKQAMAVAVKNIETFHTA   98 (431)
T ss_dssp             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCH-HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCH-HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHh
Confidence            3333344555666777777888887776655666553 21   11122 455443        34455666666665544


Q ss_pred             Cccccc-cc-cCCCcceEeeeeceEEEEEcCCC---cchh-----hhhhhcCC--eEEEeCCCCChHHHHHHHHHHhhhc
Q 011397          100 EKAKTS-IT-TFPSSAEIVPEPFGVVLIISPWN---YPFF-----VGAIAAGN--ALVLKPSEVAPASSSLLAKLVGEYM  167 (487)
Q Consensus       100 ~~~~~~-~~-~~~~~~~~~~~P~GVv~~i~p~n---~P~~-----~~ALaaGN--~Vvlkps~~~~~~~~~l~~~l~~al  167 (487)
                      +..... .. ..+.....++.|+--|++..|.-   ||-.     +||-.+|.  -|++-|+...|.+       +..+-
T Consensus        99 Q~~~~~~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM~aiPAkvAGV~~Ivv~tPp~~~~~~-------l~aa~  171 (431)
T d1k75a_          99 QKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADEI-------LYAAQ  171 (431)
T ss_dssp             TCCCCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCHHHHHHHHHHHHHHTCSEEEEEECSSCCHHH-------HHHHH
T ss_pred             hcCCCceeeccCCceeeeeeeehhhheeeccCCCccchHHHHHHHHHHHhcCCCceeEEeCCCCcchH-------HHHHH
Confidence            422211 11 22336677889999999999955   6655     99999998  4556676555532       11221


Q ss_pred             CCCcEEEEe-CChHhHHHHHh---C--CCCeEEEecCHHHHHHHHHHHhccccceeeecCCCCc--EEEcCCCCHHHHHH
Q 011397          168 DLSSIRVVE-GAVAETSALLD---Q--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP--VVFDSGINLKVACR  239 (487)
Q Consensus       168 P~g~v~~v~-g~~~~~~~L~~---~--~v~~v~ftGs~~~g~~v~~~a~~~~~p~~~e~gG~~p--~iV~~daDl~~aa~  239 (487)
                      -.|+=.+.. |+.....+|.-   .  +||.|+=.|+.-+..+=.+.......--+=-..|.+=  +|-|+++|.+.++.
T Consensus       172 ~~Gv~~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~~vgID~~aGPSEv~viAD~~a~p~~iAa  251 (431)
T d1k75a_         172 LCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVAS  251 (431)
T ss_dssp             HTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTTSCEESCCCCCCEEEEEECTTSCHHHHHH
T ss_pred             HcCccceEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCCccccccccCCceEEEEecCCCCHHHHHH
Confidence            123223333 34445555542   2  3999998888755432212211110001112346664  55567789999999


Q ss_pred             HHHHHhcccCCCCccccCCEEEEcCCcHHHHHHHHHHHHhhhcCCCCCCCCcccccCCHHHHHHHHHHHHHHHcCCeEee
Q 011397          240 RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVH  319 (487)
Q Consensus       240 ~i~~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~~~~  319 (487)
                      .++.-+= ....     .+.++|..+  .++.+++.+.+.+....-|          ..       +......       
T Consensus       252 DllaQAE-H~~~-----a~~ilvt~~--~~l~~~v~~~i~~~l~~l~----------r~-------~i~~~s~-------  299 (431)
T d1k75a_         252 DLLSQAE-HGPD-----SQVILLTPA--ADMARRVAEAVERQLAELP----------RA-------ETARQAL-------  299 (431)
T ss_dssp             HHHHHHT-TCTT-----CEEEEEESC--HHHHHHHHHHHHHHHHTCS----------SC-------HHHHHHH-------
T ss_pred             HHHhccC-Cccc-----ceeEEEecc--HHHHHHHHHHHHHHhhhch----------HH-------HHHHhhh-------
Confidence            8888765 4333     234677666  3444444443332110000          00       0011100       


Q ss_pred             CCccCCCCceeecEEEecCCCCCcccccccccceeeeeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc-cee
Q 011397          320 GGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV-SAG  398 (487)
Q Consensus       320 gg~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~~-~~g  398 (487)
                                                  +-.+    ++.++|++|+++++|..-.- -..|.++|..   ++..++ ++|
T Consensus       300 ----------------------------~~~~----ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~nAG  343 (431)
T d1k75a_         300 ----------------------------NASR----LIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAG  343 (431)
T ss_dssp             ----------------------------TTCE----EEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCCCS
T ss_pred             ----------------------------ccce----EEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhhcc
Confidence                                        0011    34578999999999995443 3678888885   556665 789


Q ss_pred             eEEEcCCcccc-------CCCCCCcccCCCCCCCCcchHHHHHHhhhccEEE
Q 011397          399 GLVINDTAVHL-------AVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL  443 (487)
Q Consensus       399 ~v~iN~~~~~~-------~~~~~pfGG~~~SG~g~~~g~~~l~~~~~~k~v~  443 (487)
                      .|++..++.-.       .++.+|-||     ..++.+.-+...|+..-++.
T Consensus       344 sIflG~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~~  390 (431)
T d1k75a_         344 SVFLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTVQ  390 (431)
T ss_dssp             EEEESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEEE
T ss_pred             hhhcCCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeEE
Confidence            99999854221       356677664     56666667788887766554