Citrus Sinensis ID: 011444

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-----
MFAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYRMWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNLSDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKSLADAVKRWDGKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLRENPEADIEDSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKLQTPKPLIKLMLNQLPLPLHHHSRSKNDYQSVANCFNIYGKRSLAAPRVRWPVSRNFGYKNNIVMGVPPKIRFSFF
cccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHEEccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccHHccccHHHHHHHHHHHccccHHHccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcHHcccHHHHHHHHHHcccccccHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHEEcccccccccEEEEcccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccEEEcccccEEEEcc
MFAEEYELQEARSFARKSLEKtmttgsrgpddvtFTSFRKVIEHeldfpwltrmEHLEYRMWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRwsrdnnlsdmgfgrekttYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKSLADAVKrwdgkglsghskTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWLTEatwsksgrtpsmeEYLETGMISIAAHTLVLTAScflnpslpnykfrpaqyDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLrenpeadieDSVAYVRELIATKEKELLEHALMdgfsdlprpckQLHLFCMKAFQMFfhssnrydsntemIDDVQKAFyiplklqtpkPLIKLMLnqlplplhhhsrskndyQSVANCFNIygkrslaaprvrwpvsrnfgyknnivmgvppkirfsff
MFAEEYELQEARSFARKslektmttgsrgpddvtFTSFRKVIeheldfpwltrmEHLEYRMWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEelkrwsrdnnlsdmgfgREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKSLADAVKRWDGKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWlteatwsksgrtPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLRenpeadiedSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKLQTPKPLIKLMLNQLPLPLHHHSRSKNDYQSVANCFNIYGKrslaaprvrwpvsrnfgyknnivmgvppkirfsff
MFAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYRMWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNLSDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKSLADAVKRWDGKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLRENPEADIEDSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKLQTPKPLIKLMLNQLPLPLHHHSRSKNDYQSVANCFNIYGKRSLAAPRVRWPVSRNFGYKNNIVMGVPPKIRFSFF
********************************VTFTSFRKVIEHELDFPWLTRMEHLEYRMWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNLSDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKSLADAVKRWDGKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWLTEATWSKSGR**SMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLRENPEADIEDSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKLQTPKPLIKLMLNQLPLPLHHHSRSKNDYQSVANCFNIYGKRSLAAPRVRWPVSRNFGYKNNIVMGVPPKIRF***
MFAEEYELQEARSFARKSLEKTM***********FTSFRKVIEHELDFPWLTRMEHLEYRMWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNLSDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKSLADAVKRWDGKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLRENPEADIEDSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKLQT********************************FNIYGKRSLAAPRVRWPV**NFGYKNNIVMGVPPKIRFSFF
*********EARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYRMWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNLSDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKSLADAVKRWDGKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLRENPEADIEDSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKLQTPKPLIKLMLNQLPLPLHHHSRSKNDYQSVANCFNIYGKRSLAAPRVRWPVSRNFGYKNNIVMGVPPKIRFSFF
MFAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYRMWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNLSDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKSLADAVKRWDGKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLRENPEADIEDSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKLQTPKPLIKLMLNQLPLPLHHHSRSKNDYQSVANCFNIYGKRSLAAPRVRWPVSRNFGYKNNIVMGVPPKIRFSFF
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MFAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYRMWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNLSDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKSLADAVKRWDGKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLRENPEADIEDSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKLQTPKPLIKLMLNQLPLPLHHHSRSKNDYQSVANCFNIYGKRSLAAPRVRWPVSRNFGYKNNIVMGVPPKIRFSFF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query485 2.2.26 [Sep-21-2011]
Q93YV0877 (E,E)-geranyllinalool syn yes no 0.826 0.457 0.511 1e-123
Q96376870 S-linalool synthase OS=Cl N/A no 0.876 0.488 0.512 1e-121
Q9SAK2785 Ent-kaur-16-ene synthase, no no 0.764 0.472 0.332 3e-53
Q0JA82756 Ent-kaur-16-ene synthase, yes no 0.758 0.486 0.332 3e-52
Q0JA81 937 Ent-kaurene synthase-like no no 0.717 0.371 0.321 1e-51
Q947C4873 Levopimaradiene synthase, N/A no 0.826 0.459 0.300 2e-48
Q0JEZ8842 Syn-pimara-7,15-diene syn no no 0.767 0.441 0.308 5e-46
Q66QH3840 Syn-pimara-7,15-diene syn N/A no 0.767 0.442 0.308 1e-45
Q84ZW8590 Acyclic sesquiterpene syn N/A no 0.775 0.637 0.308 8e-45
Q00G37830 Ent-cassa-12,15-diene syn N/A no 0.779 0.455 0.298 1e-43
>sp|Q93YV0|GES_ARATH (E,E)-geranyllinalool synthase OS=Arabidopsis thaliana GN=GES PE=2 SV=1 Back     alignment and function desciption
 Score =  442 bits (1138), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 217/424 (51%), Positives = 287/424 (67%), Gaps = 23/424 (5%)

Query: 1   MFAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYR 60
           MF  E++LQEAR + R  LEK  +               K+I HEL  PW+ R++HL++R
Sbjct: 389 MFPGEHDLQEAREYTRNLLEKRRSIK------------EKMIMHELSTPWIARLKHLDHR 436

Query: 61  MWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNL 120
           MWIE+K+ N L M KASF RL  SY+DKL  LA +N+ F+Q  Y RELEEL  W +   L
Sbjct: 437 MWIEDKNSNVLSMEKASFLRLHSSYSDKLTHLAARNFEFQQAKYCRELEELTMWVKKWGL 496

Query: 121 SDMGFGREKTTYCYFATAAAIGVSLPYDSHVRL--ILAKSAILITVADDFFDMEGSLNEL 178
           SD+GFGREKTTYCYFAT      SLPY+  ++   + AK+AILIT+ADDFFD +GS N+L
Sbjct: 497 SDIGFGREKTTYCYFATVT----SLPYEYAIKFGKLAAKTAILITIADDFFDEKGSFNDL 552

Query: 179 KSLADAVKRWDGKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASW 238
           + L  AV RW+G+ L  +   IF ALD +V E A         DI   L++IW ETF SW
Sbjct: 553 EGLTKAVLRWEGEELKSYGNIIFRALDDIVRETANTCRTHHKTDIIVHLRNIWGETFESW 612

Query: 239 LTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLL 298
           L EA WSK G T SM+EY+  GMISIAAHT+ L+ SC + P  P+ K +P  YD++T LL
Sbjct: 613 LREAEWSKKGHTSSMDEYIRNGMISIAAHTIALSISCLMEPCFPHNKLKPGNYDSITTLL 672

Query: 299 MLVPRLLNDIQSYQKEIADGKQNSVILYLRENPEADIEDSVAYVRELIATKEKELLEHAL 358
           M++PRLLND+QSYQKE   GK NSV+L+++ +P  +IEDS+A++ ++I +K KE LEH L
Sbjct: 673 MIIPRLLNDLQSYQKEQEQGKMNSVLLHMKNHPGLEIEDSIAHIEKIIDSKRKEFLEHVL 732

Query: 359 MDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKL-----QTP 413
           +DG SDLP+PCK++H+ C K F+MFF+  NRYDSNTEM+ D++KA Y P+ +       P
Sbjct: 733 VDGLSDLPKPCKEIHMSCCKVFEMFFNKKNRYDSNTEMLHDIKKALYDPINVYELSEMEP 792

Query: 414 KPLI 417
            PL+
Sbjct: 793 MPLM 796
Involved in diterpene (C20) biosynthesis. Catalyzes the conversion of geranylgeranyl diphosphate to (E,E)-geranyllinalool, the precursor of the insect-induced volatile C16-homoterpene TMTT.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 2EC: .EC: 3EC: .EC: -
>sp|Q96376|LIS_CLABR S-linalool synthase OS=Clarkia breweri GN=LIS PE=2 SV=1 Back     alignment and function description
>sp|Q9SAK2|KSB_ARATH Ent-kaur-16-ene synthase, chloroplastic OS=Arabidopsis thaliana GN=GA2 PE=1 SV=1 Back     alignment and function description
>sp|Q0JA82|KS1_ORYSJ Ent-kaur-16-ene synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=KS1 PE=1 SV=1 Back     alignment and function description
>sp|Q0JA81|KSL2_ORYSJ Ent-kaurene synthase-like 2 OS=Oryza sativa subsp. japonica GN=KSL2 PE=2 SV=2 Back     alignment and function description
>sp|Q947C4|TPSD1_GINBI Levopimaradiene synthase, chloroplastic OS=Ginkgo biloba GN=LPS PE=1 SV=1 Back     alignment and function description
>sp|Q0JEZ8|KSL4_ORYSJ Syn-pimara-7,15-diene synthase OS=Oryza sativa subsp. japonica GN=KSL4 PE=1 SV=1 Back     alignment and function description
>sp|Q66QH3|KSL4_ORYSI Syn-pimara-7,15-diene synthase OS=Oryza sativa subsp. indica GN=KSL4 PE=2 SV=1 Back     alignment and function description
>sp|Q84ZW8|ACSS_MAIZE Acyclic sesquiterpene synthase OS=Zea mays GN=TPS1 PE=1 SV=1 Back     alignment and function description
>sp|Q00G37|KSL7_ORYSI Ent-cassa-12,15-diene synthase OS=Oryza sativa subsp. indica GN=KSL7 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query485
224078910 733 predicted protein [Populus trichocarpa] 0.960 0.635 0.606 1e-171
359497234 757 PREDICTED: (E,E)-geranyllinalool synthas 0.969 0.620 0.595 1e-164
296090681555 unnamed protein product [Vitis vinifera] 0.901 0.787 0.607 1e-160
313755458 820 (E)-nerolidol/(E,E)-geranyl linalool syn 0.944 0.558 0.587 1e-159
147798066 845 hypothetical protein VITISV_010702 [Viti 0.946 0.543 0.587 1e-154
313755456 840 P(E)-nerolidol/(E,E)-geranyl linalool sy 0.940 0.542 0.581 1e-153
359497519433 PREDICTED: (E,E)-geranyllinalool synthas 0.886 0.993 0.595 1e-151
359494876 840 PREDICTED: (E,E)-geranyllinalool synthas 0.940 0.542 0.575 1e-149
296088228427 unnamed protein product [Vitis vinifera] 0.874 0.992 0.591 1e-148
357446449 806 S-linalool synthase [Medicago truncatula 0.903 0.543 0.543 1e-143
>gi|224078910|ref|XP_002305676.1| predicted protein [Populus trichocarpa] gi|222848640|gb|EEE86187.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 297/490 (60%), Positives = 366/490 (74%), Gaps = 24/490 (4%)

Query: 1   MFAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYR 60
           MF  ++EL+EARSF+RK LEKT + G+     V F SF  VI+HEL FPW+ R++HLE+R
Sbjct: 261 MFPGDHELEEARSFSRKLLEKTTSMGNEDQHTVPFPSFHSVIKHELRFPWMARLDHLEHR 320

Query: 61  MWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNL 120
           MW+EEK+ + LWMGK SFHRLSC +NDKL QLA++NY FRQ  YK ELEEL RWS+   L
Sbjct: 321 MWMEEKNSSGLWMGKTSFHRLSCLHNDKLKQLAVKNYEFRQTTYKSELEELTRWSKSWGL 380

Query: 121 SDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKS 180
           SDMGFGREKT YCYFA AA+   SLP DS +R+++AKSAI+ITVADDF+DMEGSL++L+ 
Sbjct: 381 SDMGFGREKTAYCYFAVAAS--TSLPQDSEIRMMVAKSAIVITVADDFYDMEGSLDDLEK 438

Query: 181 LADAVKRWDGKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWLT 240
           + DAV+RWD  GLSGHSKTIF ALD LV+ELA K+ +Q G DITN L+DIW ETFASW T
Sbjct: 439 ITDAVQRWDATGLSGHSKTIFDALDSLVNELARKYFRQHGTDITNSLRDIWSETFASWFT 498

Query: 241 EATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLML 300
           EA WSKSG  P+ EEYLETGM SIA+HTLVL ASCFL+PS+P+YK  P QY+++TKLLM+
Sbjct: 499 EAKWSKSGFIPAAEEYLETGMTSIASHTLVLPASCFLSPSIPDYKLNPVQYESITKLLMV 558

Query: 301 VPRLLNDIQSYQKEIADGKQNSVILYLRENPEADIEDSVAYVRELIATKEKELLEHALMD 360
           +PRLLNDIQSY+KE  +GK N V+L+L+ENPEADIEDS+AY RE++  K+KELLEHALMD
Sbjct: 559 IPRLLNDIQSYKKEQKEGKTNFVLLHLKENPEADIEDSIAYAREILDKKKKELLEHALMD 618

Query: 361 GFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKLQTPKPLIKLM 420
           GF+D  +PC+ LHL C+K FQMFF SSNRYDSNTEM  D+QKAFYIP+++  PKPL    
Sbjct: 619 GFNDFSKPCRHLHLSCVKVFQMFFDSSNRYDSNTEMFQDIQKAFYIPVEVGAPKPLPP-- 676

Query: 421 LNQLPLPLHHHSRSKNDYQSVANCFNIYGK------RSLAAPRVRWPVSRNFGYKNNIVM 474
                     H  SK  Y +V   ++   +      R  A   V  P+S N   K    M
Sbjct: 677 ----------HPGSKQRYPTVVASYHFNQRYKNRIIRLAANSVVSHPISGNPYMK----M 722

Query: 475 GVPPKIRFSF 484
            + PK++F F
Sbjct: 723 PMAPKLKFCF 732

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359497234|ref|XP_003635459.1| PREDICTED: (E,E)-geranyllinalool synthase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296090681|emb|CBI41080.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|313755458|gb|ADR74220.1| (E)-nerolidol/(E,E)-geranyl linalool synthase [Vitis vinifera] Back     alignment and taxonomy information
>gi|147798066|emb|CAN65008.1| hypothetical protein VITISV_010702 [Vitis vinifera] Back     alignment and taxonomy information
>gi|313755456|gb|ADR74219.1| P(E)-nerolidol/(E,E)-geranyl linalool synthase [Vitis vinifera] Back     alignment and taxonomy information
>gi|359497519|ref|XP_003635550.1| PREDICTED: (E,E)-geranyllinalool synthase-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|359494876|ref|XP_002279869.2| PREDICTED: (E,E)-geranyllinalool synthase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088228|emb|CBI35742.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357446449|ref|XP_003593502.1| S-linalool synthase [Medicago truncatula] gi|355482550|gb|AES63753.1| S-linalool synthase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query485
TAIR|locus:2008485877 TPS04 "terpene synthase 04" [A 0.884 0.489 0.488 1.5e-113
TAIR|locus:2206390785 GA2 "GA REQUIRING 2" [Arabidop 0.832 0.514 0.319 3.4e-53
UNIPROTKB|Q84KL4627 PT10 "(-)-alpha-terpineol synt 0.808 0.625 0.284 7.8e-36
UNIPROTKB|Q84KL6629 PT1 "(-)-alpha-pinene synthase 0.806 0.621 0.278 4.9e-34
UNIPROTKB|Q84KL3628 PT30 "(+)-alpha-pinene synthas 0.622 0.480 0.298 8.2e-30
UNIPROTKB|Q84KL5574 PT5 "Alpha-farnesene synthase" 0.690 0.583 0.284 2.9e-29
UNIPROTKB|C7ASI9627 3CAR "Carene synthase, chlorop 0.804 0.622 0.261 3.6e-28
UNIPROTKB|F1CKI6627 TPS-3car1 "Carene synthase 1, 0.804 0.622 0.261 5e-28
UNIPROTKB|J7LQ09542 J7LQ09 "Trans-alpha-bergamoten 0.595 0.533 0.304 1.5e-27
UNIPROTKB|F1CKI8627 TPS-3car2 "Carene synthase 2, 0.762 0.590 0.25 3.7e-27
TAIR|locus:2008485 TPS04 "terpene synthase 04" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
 Identities = 225/461 (48%), Positives = 298/461 (64%)

Query:     1 MFAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYR 60
             MF  E++LQEAR + R  LEK  +               K+I HEL  PW+ R++HL++R
Sbjct:   389 MFPGEHDLQEAREYTRNLLEKRRSIKE------------KMIMHELSTPWIARLKHLDHR 436

Query:    61 MWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNL 120
             MWIE+K+ N L M KASF RL  SY+DKL  LA +N+ F+Q  Y RELEEL  W +   L
Sbjct:   437 MWIEDKNSNVLSMEKASFLRLHSSYSDKLTHLAARNFEFQQAKYCRELEELTMWVKKWGL 496

Query:   121 SDMGFGREKTTYCYFATAAAIGVSLPYDSHVRL--ILAKSAILITVADDFFDMEGSLNEL 178
             SD+GFGREKTTYCYFAT      SLPY+  ++   + AK+AILIT+ADDFFD +GS N+L
Sbjct:   497 SDIGFGREKTTYCYFATVT----SLPYEYAIKFGKLAAKTAILITIADDFFDEKGSFNDL 552

Query:   179 KSLADAVKRWDGKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASW 238
             + L  AV RW+G+ L  +   IF ALD +V E A         DI   L++IW ETF SW
Sbjct:   553 EGLTKAVLRWEGEELKSYGNIIFRALDDIVRETANTCRTHHKTDIIVHLRNIWGETFESW 612

Query:   239 LTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLL 298
             L EA WSK G T SM+EY+  GMISIAAHT+ L+ SC + P  P+ K +P  YD++T LL
Sbjct:   613 LREAEWSKKGHTSSMDEYIRNGMISIAAHTIALSISCLMEPCFPHNKLKPGNYDSITTLL 672

Query:   299 MLVPRLLNDIQSYQKEIADGKQNSVILYLRENPEADIEDSVAYVRELIATKEKELLEHAL 358
             M++PRLLND+QSYQKE   GK NSV+L+++ +P  +IEDS+A++ ++I +K KE LEH L
Sbjct:   673 MIIPRLLNDLQSYQKEQEQGKMNSVLLHMKNHPGLEIEDSIAHIEKIIDSKRKEFLEHVL 732

Query:   359 MDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKL-----QTP 413
             +DG SDLP+PCK++H+ C K F+MFF+  NRYDSNTEM+ D++KA Y P+ +       P
Sbjct:   733 VDGLSDLPKPCKEIHMSCCKVFEMFFNKKNRYDSNTEMLHDIKKALYDPINVYELSEMEP 792

Query:   414 KPL---------IKLMLNQLPLPLHHHSRSKNDYQSVANCF 445
              PL         + L+LN LP  L    +        + CF
Sbjct:   793 MPLMAHGDEYMILPLLLNSLPNILEFKRKDGYGAMKTSMCF 833
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0010333 "terpene synthase activity" evidence=IEA
GO:0016829 "lyase activity" evidence=IEA
GO:0000304 "response to singlet oxygen" evidence=IEP
GO:0009536 "plastid" evidence=IDA
GO:0009611 "response to wounding" evidence=IEP;RCA
GO:0009753 "response to jasmonic acid stimulus" evidence=IGI;RCA
GO:0016102 "diterpenoid biosynthetic process" evidence=IDA
GO:0080013 "(E,E)-geranyllinalool synthase activity" evidence=IDA
GO:0080027 "response to herbivore" evidence=IEP
GO:0009617 "response to bacterium" evidence=IEP
GO:0007165 "signal transduction" evidence=RCA
GO:0009414 "response to water deprivation" evidence=RCA
GO:0009620 "response to fungus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009723 "response to ethylene stimulus" evidence=RCA
GO:0009733 "response to auxin stimulus" evidence=RCA
GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0042538 "hyperosmotic salinity response" evidence=RCA
TAIR|locus:2206390 GA2 "GA REQUIRING 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q84KL4 PT10 "(-)-alpha-terpineol synthase, chloroplastic" [Pinus taeda (taxid:3352)] Back     alignment and assigned GO terms
UNIPROTKB|Q84KL6 PT1 "(-)-alpha-pinene synthase, chloroplastic" [Pinus taeda (taxid:3352)] Back     alignment and assigned GO terms
UNIPROTKB|Q84KL3 PT30 "(+)-alpha-pinene synthase, chloroplastic" [Pinus taeda (taxid:3352)] Back     alignment and assigned GO terms
UNIPROTKB|Q84KL5 PT5 "Alpha-farnesene synthase" [Pinus taeda (taxid:3352)] Back     alignment and assigned GO terms
UNIPROTKB|C7ASI9 3CAR "Carene synthase, chloroplastic" [Picea glauca (taxid:3330)] Back     alignment and assigned GO terms
UNIPROTKB|F1CKI6 TPS-3car1 "Carene synthase 1, chloroplastic" [Picea sitchensis (taxid:3332)] Back     alignment and assigned GO terms
UNIPROTKB|J7LQ09 J7LQ09 "Trans-alpha-bergamotene synthase" [Phyla dulcis (taxid:542674)] Back     alignment and assigned GO terms
UNIPROTKB|F1CKI8 TPS-3car2 "Carene synthase 2, chloroplastic" [Picea sitchensis (taxid:3332)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.30.691
3rd Layer4.2.3.9LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.IV.2323.1
hypothetical protein (665 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query485
cd00684542 cd00684, Terpene_cyclase_plant_C1, Plant Terpene C 2e-75
PLN02279784 PLN02279, PLN02279, ent-kaur-16-ene synthase 1e-71
pfam03936270 pfam03936, Terpene_synth_C, Terpene synthase famil 5e-71
cd00868284 cd00868, Terpene_cyclase_C1, Terpene cyclases, Cla 7e-51
PLN02592800 PLN02592, PLN02592, ent-copalyl diphosphate syntha 8e-20
cd00385243 cd00385, Isoprenoid_Biosyn_C1, Isoprenoid Biosynth 8e-16
cd00687303 cd00687, Terpene_cyclase_nonplant_C1, Non-plant Te 3e-04
>gnl|CDD|173832 cd00684, Terpene_cyclase_plant_C1, Plant Terpene Cyclases, Class 1 Back     alignment and domain information 
 Score =  246 bits (631), Expect = 2e-75
 Identities = 117/405 (28%), Positives = 193/405 (47%), Gaps = 28/405 (6%)

Query: 1   MFAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYR 60
            F  E  L EA SF  K LE+ + +                IE+ L+ P    +  LE R
Sbjct: 151 SFPGEDILDEALSFTTKHLEEKLESNWIID-----PDLSGEIEYALEIPLHASLPRLEAR 205

Query: 61  MWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNL 120
            +IE       +  +         +N+ L++LA  ++   Q +++ EL+ L RW +D +L
Sbjct: 206 WYIE------FYEQEDD-------HNETLLELAKLDFNILQALHQEELKILSRWWKDLDL 252

Query: 121 SDM-GFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELK 179
           +    F R++   CYF  A       P  S  R+ LAK+  LITV DD +D+ G+L EL+
Sbjct: 253 ASKLPFARDRLVECYFWAAGTY--FEPQYSLARIALAKTIALITVIDDTYDVYGTLEELE 310

Query: 180 SLADAVKRWD---GKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFA 236
              +AV+RWD      L  + K +F AL   V+E+ E+ L++ G  +   LK+ W +   
Sbjct: 311 LFTEAVERWDISAIDQLPEYMKIVFKALLNTVNEIEEELLKEGGSYVVPYLKEAWKDLVK 370

Query: 237 SWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFR-PAQYDTVT 295
           ++L EA W+  G  P+ EEY+E  ++SI    L+LT+   +   L    F        + 
Sbjct: 371 AYLVEAKWAHEGYVPTFEEYMENALVSIGLGPLLLTSFLGMGDILTEEAFEWLESRPKLV 430

Query: 296 KLLMLVPRLLNDIQSYQKEIADGKQ-NSVILYLRENPEADIEDSVAYVRELIATKEKELL 354
           +    + RL+NDI +Y+ E+  G   +S+  Y++E      E++   ++++I    KEL 
Sbjct: 431 RASSTIGRLMNDIATYEDEMKRGDVASSIECYMKEYG-VSEEEAREEIKKMIEDAWKELN 489

Query: 355 EHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDD 399
           E   +   SD+PRP KQ  L   +   +F+   + +      I D
Sbjct: 490 EE-FLKPSSDVPRPIKQRFLNLARVIDVFYKEGDGFTHPEGEIKD 533

This CD includes a diverse group of monomeric plant terpene cyclases (Tspa-Tspf) that convert the acyclic isoprenoid diphosphates, geranyl diphosphate (GPP), farnesyl diphosphate (FPP), or geranylgeranyl diphosphate (GGPP) into cyclic monoterpenes, diterpenes, or sesquiterpenes, respectively; a few form acyclic species. Terpnoid cyclases are soluble enzymes localized to the cytosol (sesquiterpene synthases) or plastids (mono- and diterpene synthases). All monoterpene and diterpene synthases have restrict substrate specificity, however, some sesquiterpene synthases can accept both FPP and GPP. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions located on opposite walls. These residues mediate binding of prenyl diphosphates, via bridging Mg2+ ions (K+ preferred by gymnosperm cyclases), inducing conformational changes such that an N-terminal region forms a cap over the catalytic core. Loss of diphosphate from the enzyme-bound substrate (GPP, FPP, or GGPP) results in an allylic carbocation that electrophilically attacks a double bond further down the terpene chain to effect the first ring closure. Unlike monoterpene, sesquiterene, and macrocyclic diterpenes synthases, which undergo substrate ionization by diphosphate ester scission, Tpsc-like diterpene synthases catalyze cyclization reactions by an initial protonation step producing a copalyl diphosphate intermediate. These enzymes lack the aspartate-rich sequences mentioned above. Most diterpene synthases have an N-terminal, internal element (approx 210 aa) whose function is unknown. Length = 542
>gnl|CDD|177918 PLN02279, PLN02279, ent-kaur-16-ene synthase Back     alignment and domain information
>gnl|CDD|202816 pfam03936, Terpene_synth_C, Terpene synthase family, metal binding domain Back     alignment and domain information
>gnl|CDD|173837 cd00868, Terpene_cyclase_C1, Terpene cyclases, Class 1 Back     alignment and domain information
>gnl|CDD|215321 PLN02592, PLN02592, ent-copalyl diphosphate synthase Back     alignment and domain information
>gnl|CDD|173830 cd00385, Isoprenoid_Biosyn_C1, Isoprenoid Biosynthesis enzymes, Class 1 Back     alignment and domain information
>gnl|CDD|173835 cd00687, Terpene_cyclase_nonplant_C1, Non-plant Terpene Cyclases, Class 1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 485
PLN02279784 ent-kaur-16-ene synthase 100.0
cd00684542 Terpene_cyclase_plant_C1 Plant Terpene Cyclases, C 100.0
PLN02592800 ent-copalyl diphosphate synthase 100.0
PF03936270 Terpene_synth_C: Terpene synthase family, metal bi 100.0
cd00868284 Terpene_cyclase_C1 Terpene cyclases, Class 1. Terp 100.0
cd00687303 Terpene_cyclase_nonplant_C1 Non-plant Terpene Cycl 100.0
PLN0215096 terpene synthase/cyclase family protein 99.91
cd00385243 Isoprenoid_Biosyn_C1 Isoprenoid Biosynthesis enzym 99.8
PF06330376 TRI5: Trichodiene synthase (TRI5); InterPro: IPR02 98.53
cd00686357 Terpene_cyclase_cis_trans_C1 Cis, Trans, Terpene C 98.45
PF00494267 SQS_PSY: Squalene/phytoene synthase; InterPro: IPR 88.72
>PLN02279 ent-kaur-16-ene synthase Back     alignment and domain information 
Probab=100.00  E-value=5e-104  Score=871.94  Aligned_cols=407  Identities=32%  Similarity=0.551  Sum_probs=389.1

Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHhhcCCccCCchhhHHHHhHHHhcccccccccccccc
Q 011444            1 MFAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYRMWIEEKDMNALWMGKASFHR   80 (485)
Q Consensus         1 ~~~gE~iLdeA~~fs~~~L~~~~~~~~~~d~~~~~~~l~~eV~~aL~~P~~~~~~rle~r~yI~~Y~~~~~~~~Kt~~yr   80 (485)
                      +||||+|||||++||++||++.++++++.|| ++.++|++||+|||++|||+++||||||+||++|+++++||||| .||
T Consensus       369 ~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~-~~~~~L~~eV~~AL~~P~~~~l~RlEaR~yI~~Y~~~~~~i~Kt-~yr  446 (784)
T PLN02279        369 SYPDESLLEKQNSWTSHFLEQGLSNWSKTAD-RLRKYIKKEVEDALNFPYYANLERLANRRSIENYAVDDTRILKT-SYR  446 (784)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhccccccc-ccCccHHHHHHHHhcCchhcCccHHHHHHHHHHhccccchhccc-ccc
Confidence            4899999999999999999999987666565 46788999999999999999999999999999999999999999 569


Q ss_pred             ccccccHHHHHHhhccchhhhhhhHHHHHHHHHhhhhCCCCCcchhhhHHHHHhHHHhhhhcccCCCCchHHHHHHHHHH
Q 011444           81 LSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNLSDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAI  160 (485)
Q Consensus        81 ~~~~~n~~lLelAkldFn~~Qs~h~~El~~l~~W~k~~~L~~l~~aR~R~~e~yf~~~a~~~~~eP~~s~~RL~~ak~~~  160 (485)
                      ||+++|++||||||+|||+||++||+||++++|||+++||.+++|+|+|+++||||++|  ++|+|++|.+|+++||.++
T Consensus       447 ~~~~~n~~lLeLAklDFN~~Qs~hq~EL~~l~rWwke~~L~~L~faRdr~ve~Yf~aaa--~~fEPe~S~aRi~~aK~~~  524 (784)
T PLN02279        447 CSNICNQDFLKLAVEDFNFCQSIHREELKQLERWIVENRLDKLKFARQKLAYCYFSAAA--TLFSPELSDARLSWAKNGV  524 (784)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHHHHhCeeHHhcCCccCCchhhHHHHHHHHHHH--hhcCchhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999  9999999999999999999


Q ss_pred             HHHHhhhhcccCCCHHHHHHHHHHHHhhcC----CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHH
Q 011444          161 LITVADDFFDMEGSLNELKSLADAVKRWDG----KGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFA  236 (485)
Q Consensus       161 ~~fi~DD~~D~~gt~eEl~~~~~ai~rwd~----~~lpe~~k~~~~al~d~~~ei~~~~~~~~g~~~~~~l~~~w~~~l~  236 (485)
                      +++++||+||.|||.||++.||+||+|||.    +.+|+||++||.+|++++++++.++.+.||+++.+++++.|+++++
T Consensus       525 L~tviDD~fD~yGt~eEL~~ft~aVeRWD~~~~~~~lpeymki~f~aL~~t~nei~~~~~~~qGr~v~~~l~~aW~~ll~  604 (784)
T PLN02279        525 LTTVVDDFFDVGGSEEELENLIQLVEKWDVNGSPDFCSEQVEIIFSALRSTISEIGDKAFTWQGRNVTSHIIKIWLDLLK  604 (784)
T ss_pred             HHHHHHHHhhccCCHHHHHHHHHHHHHhccccchhhCcHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence            999999999999999999999999999983    5689999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHhcCCCCCCHHHHHHhchhhhHHHHHHHHHHHhcCCCCCccccccCccchHHHHHHHHHHHhcChhhHHHHHh
Q 011444          237 SWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIA  316 (485)
Q Consensus       237 a~l~EA~w~~~g~vPsleEYl~~r~~S~g~~~~~~~~~~~~g~~Lp~ev~~~~~~~~L~~~~~~i~rL~NDI~S~~kE~~  316 (485)
                      +|++||+|+.+|++||+||||+++.+|+|+.++++.+.+++|..+|+++++++.+++|+++++.++||+|||.||++|++
T Consensus       605 ayl~EAeW~~~g~vPT~eEYL~na~vS~~l~~i~l~~~~~~G~~l~eev~e~~~~~~L~~l~s~I~RLlNDI~S~e~E~~  684 (784)
T PLN02279        605 SMLTEAQWSSNKSTPTLDEYMTNAYVSFALGPIVLPALYLVGPKLSEEVVDSPELHKLYKLMSTCGRLLNDIRGFKRESK  684 (784)
T ss_pred             HHHHHHHHHhcCCCCCHHHHHhhchhhhhhHHHHHHHHHHhCCCCCHHHHhCcchhHHHHHHHHHHHHHHhccccHhHHh
Confidence            99999999999999999999999999999999989899999999999999989999999999999999999999999999


Q ss_pred             cCCchhHHH-HHhhC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHhHHHHHHhHhhhhhhhcccCCCCCCch
Q 011444          317 DGKQNSVIL-YLREN-PEADIEDSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNT  394 (485)
Q Consensus       317 ~G~~~n~V~-ymke~-~g~S~EeAi~~v~~~i~~~~k~ln~~~l~~~~~~vp~~~~~~~ln~aR~~~~~Y~~~Dg~t~~~  394 (485)
                      +|++ |+|. ||+|+ +|+|+|||++++.++|++.||+||+++++++++.+|++|+++++|++|++++||+++||||.+ 
T Consensus       685 rG~~-nsV~cYMke~~~gvSeEEAi~~i~~~Ie~~wKeLn~~~l~~~~~~vp~~~~~~~ln~aR~~~~~Y~~~Dgyt~~-  762 (784)
T PLN02279        685 EGKL-NAVSLHMIHGNGNSTEEEAIESMKGLIESQRRELLRLVLQEKGSNVPRECKDLFWKMSKVLHLFYRKDDGFTSN-  762 (784)
T ss_pred             CCCc-ceehhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhhhhheeCCCCCChH-
Confidence            9998 8888 99986 389999999999999999999999999985445699999999999999999999999999975 


Q ss_pred             hHHHHHHhhhcccccCCCC
Q 011444          395 EMIDDVQKAFYIPLKLQTP  413 (485)
Q Consensus       395 ~~k~~I~~ll~~pi~~~~~  413 (485)
                      +||++|++||++||+++++
T Consensus       763 ~~k~~i~~ll~ePi~l~~~  781 (784)
T PLN02279        763 DMMSLVKSVIYEPVSLQEE  781 (784)
T ss_pred             HHHHHHHHHhccCCcCCcc
Confidence            8999999999999998654

>cd00684 Terpene_cyclase_plant_C1 Plant Terpene Cyclases, Class 1 Back     alignment and domain information
>PLN02592 ent-copalyl diphosphate synthase Back     alignment and domain information
>PF03936 Terpene_synth_C: Terpene synthase family, metal binding domain; InterPro: IPR005630 Sequences containing this domain belong to the terpene synthase family Back     alignment and domain information
>cd00868 Terpene_cyclase_C1 Terpene cyclases, Class 1 Back     alignment and domain information
>cd00687 Terpene_cyclase_nonplant_C1 Non-plant Terpene Cyclases, Class 1 Back     alignment and domain information
>PLN02150 terpene synthase/cyclase family protein Back     alignment and domain information
>cd00385 Isoprenoid_Biosyn_C1 Isoprenoid Biosynthesis enzymes, Class 1 Back     alignment and domain information
>PF06330 TRI5: Trichodiene synthase (TRI5); InterPro: IPR024652 This family consists of several fungal trichodiene synthase proteins (EC:4 Back     alignment and domain information
>cd00686 Terpene_cyclase_cis_trans_C1 Cis, Trans, Terpene Cyclases, Class 1 Back     alignment and domain information
>PF00494 SQS_PSY: Squalene/phytoene synthase; InterPro: IPR002060 Squalene synthase 2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query485
3p5p_A764 Crystal Structure Of Taxadiene Synthase From Pacifi 3e-40
3s9v_A785 Abietadiene Synthase From Abies Grandis Length = 78 5e-40
3sae_A817 Structure Of A Three-Domain Sesquiterpene Synthase: 5e-34
2ong_A543 Crystal Structure Of Of Limonene Synthase With 2- F 5e-25
3n0f_A555 Crystal Structure Of Isoprene Synthase From Grey Po 6e-24
1n1b_A549 Crystal Structure Of (+)-bornyl Diphosphate Synthas 6e-24
2j5c_A569 Rational Conversion Of Substrate And Product Specif 7e-24
1hx9_A548 Crystal Structure Of Teas W273s Form 1 Length = 548 2e-17
1hxg_A548 Crystal Structure Of Teas W273sC440W Length = 548 3e-17
4di5_A535 Co-Crystal Structure Of Wt 5-Epi-Aristolochene Synt 8e-17
5eau_A548 5-Epi-Aristolochene Synthase From Nicotiana Tabacum 8e-17
5eat_A548 5-Epi-Aristolochene Synthase From Nicotiana Tabacum 8e-17
5eas_A548 5-Epi-Aristolochene Synthase From Nicotiana Tabacum 8e-17
1hxc_A548 Crystal Structure Of Teas C440w Length = 548 8e-17
3m01_A550 The Crystal Structure Of 5-Epi-Aristolochene Syntha 9e-17
3lz9_A550 The Crystal Structure Of 5-Epi-Aristolochene Syntha 1e-16
3g4d_A554 Crystal Structure Of (+)-Delta-Cadinene Synthase Fr 5e-11
3pya_A727 Crystal Structure Of Ent-Copalyl Diphosphate Syntha 8e-11
>pdb|3P5P|A Chain A, Crystal Structure Of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) In Complex With Mg2+ And 13-Aza-13,14-Dihydrocopalyl Diphosphate Length = 764 Back     alignment and structure 
Iteration: 1

 Score =  162 bits (411), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 206/420 (49%), Gaps = 23/420 (5%)
Query: 2   FAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYRM 61
           F +E  + +AR FA   L + + T        T T   K IE+ +++PW   +  LE R 
Sbjct: 353 FPDERAMDDARKFAEPYLREALATKIS-----TNTKLFKEIEYVVEYPWHMSIPRLEARS 407
Query: 62  WIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNLS 121
           +I+  D N +W  K + +R+    N K ++LA  ++   Q +++ EL+ L RW +++ ++
Sbjct: 408 YIDSYDDNYVWQRK-TLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGMA 466
Query: 122 DMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKSL 181
           D+ F R +    YF++A       P  S  R+   K   L  + DD  D+  +L+ELKS 
Sbjct: 467 DINFTRHRVAEVYFSSATF----EPEYSATRIAFTKIGCLQVLFDDMADIFATLDELKSF 522
Query: 182 ADAVKRWDGKGL---SGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASW 238
            + VKRWD   L       +T F     L+ E+    ++ QGRD+   ++  W   F  +
Sbjct: 523 TEGVKRWDTSLLHEIPECMQTCFKVWFKLMEEVNNDVVKVQGRDMLAHIRKPWELYFNCY 582
Query: 239 LTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDT-VTKL 297
           + E  W ++G  P+ EEYL+T  IS+      L     +   + +       Y + + +L
Sbjct: 583 VQEREWLEAGYIPTFEEYLKTYAISVGLGPCTLQPILLMGELVKDDVVEKVHYPSNMFEL 642
Query: 298 LMLVPRLLNDIQSYQKEIADGKQNSVI-LYLRENPEADIEDSVAYVRELIATKEKELLEH 356
           + L  RL ND ++YQ E A G+Q S I  Y+++NP A  ED++ ++  ++    KE    
Sbjct: 643 VSLSWRLTNDTKTYQAEKARGQQASGIACYMKDNPGATEEDAIKHICRVVDRALKE---- 698
Query: 357 ALMDGF---SDLPRPCKQLHLFCMKAFQMFFHSSNRYD-SNTEMIDDVQKAFYIPLKLQT 412
           A  + F   +D+P  CK          Q+F+   + Y  +N E+ D ++K +  P+++ +
Sbjct: 699 ASFEYFKPSNDIPMGCKSFIFNLRLCVQIFYKFIDGYGIANEEIKDYIRKVYIDPIQVGS 758
>pdb|3S9V|A Chain A, Abietadiene Synthase From Abies Grandis Length = 785 Back     alignment and structure
>pdb|3SAE|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A Prospective Target For Advanced Biofuels Production Length = 817 Back     alignment and structure
>pdb|2ONG|A Chain A, Crystal Structure Of Of Limonene Synthase With 2- Fluorogeranyl Diphosphate (Fgpp). Length = 543 Back     alignment and structure
>pdb|3N0F|A Chain A, Crystal Structure Of Isoprene Synthase From Grey Poplar Leaves (Populus X Canescens) Length = 555 Back     alignment and structure
>pdb|1N1B|A Chain A, Crystal Structure Of (+)-bornyl Diphosphate Synthase From Sage Length = 549 Back     alignment and structure
>pdb|2J5C|A Chain A, Rational Conversion Of Substrate And Product Specificity In A Monoterpene Synthase. Structural Insights Into The Molecular Basis Of Rapid Evolution. Length = 569 Back     alignment and structure
>pdb|1HX9|A Chain A, Crystal Structure Of Teas W273s Form 1 Length = 548 Back     alignment and structure
>pdb|1HXG|A Chain A, Crystal Structure Of Teas W273sC440W Length = 548 Back     alignment and structure
>pdb|4DI5|A Chain A, Co-Crystal Structure Of Wt 5-Epi-Aristolochene Synthase From Nicotiana Tobaccum With Geraniline Length = 535 Back     alignment and structure
>pdb|5EAU|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum Length = 548 Back     alignment and structure
>pdb|5EAT|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum With Substrate Analog Farnesyl Hydroxyphosphonate Length = 548 Back     alignment and structure
>pdb|5EAS|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum Length = 548 Back     alignment and structure
>pdb|1HXC|A Chain A, Crystal Structure Of Teas C440w Length = 548 Back     alignment and structure
>pdb|3M01|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl Diphosphate Length = 550 Back     alignment and structure
>pdb|3LZ9|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase M4 Mut Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl Diphospha Length = 550 Back     alignment and structure
>pdb|3G4D|A Chain A, Crystal Structure Of (+)-Delta-Cadinene Synthase From Gossypium Arboreum And Evolutionary Divergence Of Metal Binding Motifs For Catalysis Length = 554 Back     alignment and structure
>pdb|3PYA|A Chain A, Crystal Structure Of Ent-Copalyl Diphosphate Synthase From Arabidopsis Thaliana In Complex With (S)-15-Aza-14,15-Dihydrogeranylgeranyl Thiolodiphosphate Length = 727 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query485
3p5p_A764 Taxadiene synthase; class I and II terpene cyclase 4e-76
3sdr_A817 Alpha-bisabolene synthase; lyase, terpene synthase 8e-73
3s9v_A785 Abietadiene synthase, chloroplastic; alpha bundle/ 2e-72
2ong_A543 4S-limonene synthase; monoterpene synthase, monote 1e-67
3g4d_A554 (+)-delta-cadinene synthase isozyme XC1; cyclase, 1e-66
2j5c_A569 1,8-cineole synthase; terpene synthases, 1, monote 8e-66
1n1b_A549 (+)-bornyl diphosphate synthase; terpene synthase 3e-65
3m00_A550 Aristolochene synthase; plant terpenoid cyclase, l 2e-64
3n0f_A555 Isoprene synthase; terpene cyclase fold, hemiterpe 2e-63
3pya_A727 ENT-copalyl diphosphate synthase, chloroplastic; c 8e-57
1ps1_A337 Pentalenene synthase; antibiotic biosynthesis, ses 1e-35
3kb9_A382 EPI-isozizaene synthase; terpenoid cyclase, alpha- 7e-33
3bny_A320 Aristolochene synthase; sesquiterpene cyclase, iso 3e-19
1di1_A300 Aristolochene synthase; sesquiterpene cyclase, iso 2e-16
3v1v_A433 2-MIB synthase, 2-methylisoborneol synthase; class 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A* Length = 764 Back     alignment and structure
 Score =  252 bits (645), Expect = 4e-76
 Identities = 115/422 (27%), Positives = 203/422 (48%), Gaps = 17/422 (4%)

Query: 1   MFAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYR 60
            F +E  + +AR FA   L + + T        T T   K IE+ +++PW   +  LE R
Sbjct: 352 AFPDERAMDDARKFAEPYLREALATKI-----STNTKLFKEIEYVVEYPWHMSIPRLEAR 406

Query: 61  MWIEEKDMNALWMGKASFHRLSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNL 120
            +I+  D N +W  K + +R+    N K ++LA  ++   Q +++ EL+ L RW +++ +
Sbjct: 407 SYIDSYDDNYVWQRK-TLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGM 465

Query: 121 SDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILITVADDFFDMEGSLNELKS 180
           +D+ F R +    YF++A       P  S  R+   K   L  + DD  D+  +L+ELKS
Sbjct: 466 ADINFTRHRVAEVYFSSA----TFEPEYSATRIAFTKIGCLQVLFDDMADIFATLDELKS 521

Query: 181 LADAVKRWDGKG---LSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFAS 237
             + VKRWD      +    +T F     L+ E+    ++ QGRD+   ++  W   F  
Sbjct: 522 FTEGVKRWDTSLLHEIPECMQTCFKVWFKLMEEVNNDVVKVQGRDMLAHIRKPWELYFNC 581

Query: 238 WLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDT-VTK 296
           ++ E  W ++G  P+ EEYL+T  IS+      L     +   + +       Y + + +
Sbjct: 582 YVQEREWLEAGYIPTFEEYLKTYAISVGLGPCTLQPILLMGELVKDDVVEKVHYPSNMFE 641

Query: 297 LLMLVPRLLNDIQSYQKEIADGKQNSVI-LYLRENPEADIEDSVAYVRELIATKEKELLE 355
           L+ L  RL ND ++YQ E A G+Q S I  Y+++NP A  ED++ ++  ++    KE   
Sbjct: 642 LVSLSWRLTNDTKTYQAEKARGQQASGIACYMKDNPGATEEDAIKHICRVVDRALKEASF 701

Query: 356 HALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRY-DSNTEMIDDVQKAFYIPLKLQTPK 414
                  +D+P  CK          Q+F+   + Y  +N E+ D ++K +  P+++ +  
Sbjct: 702 EYFKPS-NDIPMGCKSFIFNLRLCVQIFYKFIDGYGIANEEIKDYIRKVYIDPIQVGSHH 760

Query: 415 PL 416
             
Sbjct: 761 HH 762
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A* Length = 817 Back     alignment and structure
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis} Length = 785 Back     alignment and structure
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A* Length = 543 Back     alignment and structure
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A* Length = 554 Back     alignment and structure
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa} Length = 569 Back     alignment and structure
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A* Length = 549 Back     alignment and structure
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A* Length = 550 Back     alignment and structure
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A* Length = 555 Back     alignment and structure
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A* Length = 727 Back     alignment and structure
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A Length = 337 Back     alignment and structure
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A* Length = 382 Back     alignment and structure
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A* Length = 320 Back     alignment and structure
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A Length = 300 Back     alignment and structure
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query485
3s9v_A785 Abietadiene synthase, chloroplastic; alpha bundle/ 100.0
3sdr_A817 Alpha-bisabolene synthase; lyase, terpene synthase 100.0
3p5p_A764 Taxadiene synthase; class I and II terpene cyclase 100.0
3g4d_A554 (+)-delta-cadinene synthase isozyme XC1; cyclase, 100.0
3n0f_A555 Isoprene synthase; terpene cyclase fold, hemiterpe 100.0
3m00_A550 Aristolochene synthase; plant terpenoid cyclase, l 100.0
2ong_A543 4S-limonene synthase; monoterpene synthase, monote 100.0
1n1b_A549 (+)-bornyl diphosphate synthase; terpene synthase 100.0
2j5c_A569 1,8-cineole synthase; terpene synthases, 1, monote 100.0
3pya_A727 ENT-copalyl diphosphate synthase, chloroplastic; c 100.0
1ps1_A337 Pentalenene synthase; antibiotic biosynthesis, ses 100.0
1di1_A300 Aristolochene synthase; sesquiterpene cyclase, iso 100.0
3bny_A320 Aristolochene synthase; sesquiterpene cyclase, iso 100.0
3kb9_A382 EPI-isozizaene synthase; terpenoid cyclase, alpha- 100.0
3v1v_A433 2-MIB synthase, 2-methylisoborneol synthase; class 100.0
1yyq_A374 Trichodiene synthase; terpenoid cyclase fold, site 99.89
3acx_A293 Dehydrosqualene synthase; CRTM, carotenoid biosynt 81.47
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis} Back     alignment and structure
Probab=100.00  E-value=1.8e-105  Score=888.96  Aligned_cols=403  Identities=26%  Similarity=0.472  Sum_probs=386.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHhhcCCccCCchhhHHHHhHHHhcccccccccccccc
Q 011444            1 MFAEEYELQEARSFARKSLEKTMTTGSRGPDDVTFTSFRKVIEHELDFPWLTRMEHLEYRMWIEEKDMNALWMGKASFHR   80 (485)
Q Consensus         1 ~~~gE~iLdeA~~fs~~~L~~~~~~~~~~d~~~~~~~l~~eV~~aL~~P~~~~~~rle~r~yI~~Y~~~~~~~~Kt~~yr   80 (485)
                      +||||+|||||++||++||++.+.+++..|||+++++|++||+|||++|||+++||||||+||++|+++++||||| .||
T Consensus       376 ~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~d~~~~~~~L~~eV~~aL~~P~~~~l~RleaR~yI~~Y~~~~~~i~Kt-~yr  454 (785)
T 3s9v_A          376 SFPGETIMEEAKLCTERYLRNALENVDAFDKWAFKKNIRGEVEYALKYPWHKSMPRLEARSYIENYGPDDVWLGKT-VYM  454 (785)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHTTTCCTTCTTCSSSCHHHHHHHHHHSCGGGCCHHHHHHHHHHHCCTTCCEESSS-EEC
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHhccccccccccCCcHHHHHHHHhCCccccCchHHHHHHHHHHhcccchhhhcc-ccc
Confidence            4899999999999999999999888888999999999999999999999999999999999999999999999999 589


Q ss_pred             ccccccHHHHHHhhccchhhhhhhHHHHHHHHHhhhhCCCCCcchhhhHHHHHhHHHhhhhcccCCCCchHHHHHHHHHH
Q 011444           81 LSCSYNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNLSDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAI  160 (485)
Q Consensus        81 ~~~~~n~~lLelAkldFn~~Qs~h~~El~~l~~W~k~~~L~~l~~aR~R~~e~yf~~~a~~~~~eP~~s~~RL~~ak~~~  160 (485)
                      ||+.+|++||||||+|||+||++||+||++++|||+++||.++||+|+|+++||||++|  ++|+|++|.+|+++||+++
T Consensus       455 ~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l~~l~faRdr~ve~Yfw~~~--~~feP~~s~~R~~~aK~~~  532 (785)
T 3s9v_A          455 MPYISNEKYLELAKLDFNKVQSIHQTELQDLRRWWKSSGFTDLNFTRERVTEIYFSPAS--FIFEPEFSKCREVYTKTSN  532 (785)
T ss_dssp             CTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCSSSCCCHHHHHHHHHH--HSCSGGGHHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHcCCCcCccHHHHHHHHHHHHHH--hcCCccchHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999  9999999999999999999


Q ss_pred             HHHHhhhhcccCCCHHHHHHHHHHHHhhc---CCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHH
Q 011444          161 LITVADDFFDMEGSLNELKSLADAVKRWD---GKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFAS  237 (485)
Q Consensus       161 ~~fi~DD~~D~~gt~eEl~~~~~ai~rwd---~~~lpe~~k~~~~al~d~~~ei~~~~~~~~g~~~~~~l~~~w~~~l~a  237 (485)
                      +++++||+||.|||+||++.||+||+|||   ++.+|+|||+||.+|+++++|++.++.+.+|+++.++++++|++++++
T Consensus       533 l~tviDD~yD~ygT~eEl~~ft~ai~RWD~~~~~~Lpeymk~~f~aL~~~~nei~~~~~~~~g~~~~~ylk~aw~~l~~a  612 (785)
T 3s9v_A          533 FTVILDDLYDAHGSLDDLKLFTESVKRWDLSLVDQMPQQMKICFVGFYNTFNDIAKEGRERQGRDVLGYIQNVWKVQLEA  612 (785)
T ss_dssp             HHHHHHHHHTSCCCHHHHHHHHHHHHHTSSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCHHHHHHHHHHHHHcCchhhhcCChhHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999   467999999999999999999999998889999999999999999999


Q ss_pred             HHHHHhHhcCCCCCCHHHHHHhchhhhHHHHHHHHHHHhcCCCCCccccccCcc-chHHHHHHHHHHHhcChhhHHHHHh
Q 011444          238 WLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQY-DTVTKLLMLVPRLLNDIQSYQKEIA  316 (485)
Q Consensus       238 ~l~EA~w~~~g~vPsleEYl~~r~~S~g~~~~~~~~~~~~g~~Lp~ev~~~~~~-~~L~~~~~~i~rL~NDI~S~~kE~~  316 (485)
                      |++||+|+.+|++||+||||++|.+|+|++++++++++++|..+|+++++++.+ ++|+++++.|+||+|||.||++|++
T Consensus       613 yl~EAkW~~~gyvPT~eEYl~na~vS~g~~~l~~~~~~~~G~~lt~e~~e~~~~~~~l~~~~~~I~RL~NDi~S~k~E~~  692 (785)
T 3s9v_A          613 YTKEAEWSEAKYVPSFNEYIENASVSIALGTVVLISALFTGEVLTDEVLSKIDRESRFLQLMGLTGRLVNDTKTYQAERG  692 (785)
T ss_dssp             HHHHHHHHHTTCCCCHHHHHHHHHHHTCHHHHHHHHTTCSSSCCCHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCHHHHHHhccccchHHHHHHHHHHHcCCCCCHHHHhcccccHHHHHHHHHHHHHhcccchhhHHHh
Confidence            999999999999999999999999999999999999999999999999998876 9999999999999999999999999


Q ss_pred             cCCchhHHH-HHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHhHHHHHHhHhhhhhhhcccCCCCCCch-
Q 011444          317 DGKQNSVIL-YLRENPEADIEDSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNT-  394 (485)
Q Consensus       317 ~G~~~n~V~-ymke~~g~S~EeAi~~v~~~i~~~~k~ln~~~l~~~~~~vp~~~~~~~ln~aR~~~~~Y~~~Dg~t~~~-  394 (485)
                      +|+++|+|. ||+|++|+|+|||++++.++|+++||+||++++++  + +|++|+++++|++|++++||+++||||.++ 
T Consensus       693 rG~~as~V~cYMke~~gvSeEeA~~~i~~~Ie~~wKeln~e~l~~--~-~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~  769 (785)
T 3s9v_A          693 QGEVASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFVNN--K-IPDIYKRLVFETARIMQLFYMQGDGLTLSHD  769 (785)
T ss_dssp             HSCCCSHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHS--C-CCHHHHHHHHHHHHHHHHHTCCCC----CHH
T ss_pred             cCCcchHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC--C-CCHHHHHHHHHHHHHHHHHhcCCCCCCCCCh
Confidence            999999999 99999889999999999999999999999999984  5 999999999999999999999999999974 


Q ss_pred             -hHHHHHHhhhccccc
Q 011444          395 -EMIDDVQKAFYIPLK  409 (485)
Q Consensus       395 -~~k~~I~~ll~~pi~  409 (485)
                       +||++|++||++||.
T Consensus       770 ~~~k~~i~~ll~~Pi~  785 (785)
T 3s9v_A          770 MEIKEHVKNCLFQPVA  785 (785)
T ss_dssp             HHHHHHHHHHHTSCCC
T ss_pred             HHHHHHHHHHhcccCC
Confidence             599999999999973
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A* Back     alignment and structure
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A* Back     alignment and structure
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A* Back     alignment and structure
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A* Back     alignment and structure
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A* Back     alignment and structure
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A* Back     alignment and structure
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A* Back     alignment and structure
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa} Back     alignment and structure
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A* Back     alignment and structure
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A Back     alignment and structure
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A Back     alignment and structure
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A* Back     alignment and structure
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A* Back     alignment and structure
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Back     alignment and structure
>1yyq_A Trichodiene synthase; terpenoid cyclase fold, site-directed mutant, pyrophosphate, lyase; 2.10A {Fusarium sporotrichioides} PDB: 1yj4_A 1yyr_A* 1yys_A* 1jfa_A 1jfg_A 2q9y_A* 2q9z_A 2ael_A* 2aek_A* 2aet_A 2ps7_A 2ps8_A 1kiy_A 1kiz_A 1yyt_A* 1yyu_A* 2ps5_A 2ps4_A 2ps6_A Back     alignment and structure
>3acx_A Dehydrosqualene synthase; CRTM, carotenoid biosynthesis, staphyloxanthin biosynthesis, transferase, head-TO-head condensation, inhibitor; HET: 673; 1.31A {Staphylococcus aureus} PDB: 2zcp_A* 2zcq_A* 2zcr_A* 2zcs_A* 2zy1_A* 3acw_A* 2zco_A* 3acy_A* 3npr_A* 3nri_A* 3tfn_A* 3tfp_A* 3tfv_A* 3adz_A* 3lgz_B* 3vjd_A* 3vje_A* 3ae0_A* 4ea2_A* 4e9u_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 485
d1n1ba2328 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synth 4e-75
d5easa2328 a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase 7e-73
d1ps1a_311 a.128.1.4 (A:) Pentalenene synthase {Streptomyces 1e-31
d1di1a_300 a.128.1.4 (A:) Aristolochene synthase {Fungus (Pen 1e-22
d1n1ba1207 a.102.4.1 (A:64-270) (+)-bornyl diphosphate syntha 3e-08
d5easa1197 a.102.4.1 (A:24-220) 5-Epi-aristolochene synthase 6e-08
>d1n1ba2 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]} Length = 328 Back     information, alignment and structure

class: All alpha proteins
fold: Terpenoid synthases
superfamily: Terpenoid synthases
family: Terpenoid cyclase C-terminal domain
domain: (+)-bornyl diphosphate synthase
species: Garden sage (Salvia officinalis) [TaxId: 38868]

 Score =  237 bits (606), Expect = 4e-75
 Identities = 70/330 (21%), Positives = 135/330 (40%), Gaps = 11/330 (3%)

Query: 86  NDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNLSD-MGFGREKTTYCYFATAAAIGVS 144
           N  + +LA  N+   Q  +++EL++L RW       + + F R++    +F         
Sbjct: 2   NPLIFELAKLNFNIIQATHQQELKDLSRWWSRLCFPEKLPFVRDRLVESFFWAVGMF--E 59

Query: 145 LPYDSHVRLILAKSAILITVADDFFDMEGSLNELKSLADAVKRWD---GKGLSGHSKTIF 201
                + R + A   +L TV DD +D+ G+L+EL+   D  KRWD      L  + +  +
Sbjct: 60  PHQHGYQRKMAATIIVLATVIDDIYDVYGTLDELELFTDTFKRWDTESITRLPYYMQLCY 119

Query: 202 GALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWLTEATWSKSGRTPSMEEYLETGM 261
             +   +S+ A   L++ G      L+    +   ++  EA W  SG TPS++EYL    
Sbjct: 120 WGVHNYISDAAYDILKEHGFFCLQYLRKSVVDLVEAYFHEAKWYHSGYTPSLDEYLNIAK 179

Query: 262 ISIAAHTLVLTASCFLNPSLPNYKFR--PAQYDTVTKLLMLVPRLLNDIQSYQKEIADGK 319
           IS+A+  ++         +  +        QY  +  L  ++ RL +D+ +   E+A G 
Sbjct: 180 ISVASPAIISPTYFTFANASHDTAVIDSLYQYHDILCLAGIILRLPDDLGTSYFELARGD 239

Query: 320 QNSVILYLRENPEADIEDSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKA 379
               I    +   A  E++V +V+ LI    K++            P           + 
Sbjct: 240 VPKTIQCYMKETNASEEEAVEHVKFLIREAWKDMNTAIAAG--YPFPDGMVAGAANIGRV 297

Query: 380 FQMFFHSSNRY-DSNTEMIDDVQKAFYIPL 408
            Q  +   + +   +++  + +    + P 
Sbjct: 298 AQFIYLHGDGFGVQHSKTYEHIAGLLFEPY 327
>d5easa2 a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 328 Back     information, alignment and structure
>d1ps1a_ a.128.1.4 (A:) Pentalenene synthase {Streptomyces sp., UC5319 [TaxId: 1931]} Length = 311 Back     information, alignment and structure
>d1di1a_ a.128.1.4 (A:) Aristolochene synthase {Fungus (Penicillium roqueforti) [TaxId: 5082]} Length = 300 Back     information, alignment and structure
>d1n1ba1 a.102.4.1 (A:64-270) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]} Length = 207 Back     information, alignment and structure
>d5easa1 a.102.4.1 (A:24-220) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 197 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query485
d5easa2328 5-Epi-aristolochene synthase {Tobacco (Nicotiana t 100.0
d1n1ba2328 (+)-bornyl diphosphate synthase {Garden sage (Salv 100.0
d1ps1a_311 Pentalenene synthase {Streptomyces sp., UC5319 [Ta 100.0
d1di1a_300 Aristolochene synthase {Fungus (Penicillium roquef 100.0
d1n1ba1207 (+)-bornyl diphosphate synthase {Garden sage (Salv 99.64
d1kiya_354 Trichodiene synthase {Fusarium sporotrichioides [T 99.6
d5easa1197 5-Epi-aristolochene synthase {Tobacco (Nicotiana t 99.56
>d5easa2 a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All alpha proteins
fold: Terpenoid synthases
superfamily: Terpenoid synthases
family: Terpenoid cyclase C-terminal domain
domain: 5-Epi-aristolochene synthase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=1e-85  Score=666.68  Aligned_cols=321  Identities=20%  Similarity=0.324  Sum_probs=301.4

Q ss_pred             ccHHHHHHhhccchhhhhhhHHHHHHHHHhhhhCCC-CCcchhhhHHHHHhHHHhhhhcccCCCCchHHHHHHHHHHHHH
Q 011444           85 YNDKLMQLAIQNYGFRQLVYKRELEELKRWSRDNNL-SDMGFGREKTTYCYFATAAAIGVSLPYDSHVRLILAKSAILIT  163 (485)
Q Consensus        85 ~n~~lLelAkldFn~~Qs~h~~El~~l~~W~k~~~L-~~l~~aR~R~~e~yf~~~a~~~~~eP~~s~~RL~~ak~~~~~f  163 (485)
                      .|++||||||+|||+||++||+||+.++|||+++|+ .++||+|+|+++||||++|  ++|+|++|.+|+++||.+++++
T Consensus         1 ~N~~lLelAKlDFN~~Q~~hq~El~~l~rWw~~~~l~~~l~~aRdr~ve~Yfw~~~--~~fEP~~s~~R~~~aK~~~l~t   78 (328)
T d5easa2           1 KNNVLLRFAKLDFNLLQMLHKQELAQVSRWWKDLDFVTTLPYARDRVVECYFWALG--VYFEPQYSQARVMLVKTISMIS   78 (328)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCTTSCCCHHHHHHHHHH--HCCSGGGHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCcccCCchHHHHHHHHHHHHH--hhcChhhHHHHHHHHHHHHHHH
Confidence            389999999999999999999999999999999999 6799999999999999999  9999999999999999999999


Q ss_pred             HhhhhcccCCCHHHHHHHHHHHHhhc---CCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHH
Q 011444          164 VADDFFDMEGSLNELKSLADAVKRWD---GKGLSGHSKTIFGALDGLVSELAEKHLQQQGRDITNDLKDIWYETFASWLT  240 (485)
Q Consensus       164 i~DD~~D~~gt~eEl~~~~~ai~rwd---~~~lpe~~k~~~~al~d~~~ei~~~~~~~~g~~~~~~l~~~w~~~l~a~l~  240 (485)
                      ++||+||.|||.||++.||++|+|||   ++.+|+||+++|.++++++++++.++.+.+|++..+++++.|++++++|++
T Consensus        79 i~DD~yD~ygt~eEl~~ft~ai~rWd~~~~~~lp~ymk~~~~~l~~~~~e~~~~~~~~~~~~~~~~l~~~w~~~~~~~l~  158 (328)
T d5easa2          79 IVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEVVRNYNV  158 (328)
T ss_dssp             HHHHHHHHTCCHHHHHHHHHHHHHTCSGGGGGSCHHHHHHHHHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhcccCCCHHHHHHHHHHHhcCCcchhhhCCchHHHHHHHHHHHHHHHHHHHHHhcCeeeHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998   578999999999999999999999999999999999999999999999999


Q ss_pred             HHhHhcCCCCCCHHHHHHhchhhhHHHHHHHHHHHhcCCCCCccccccCccchHHHHHHHHHHHhcChhhHHHHHhcCCc
Q 011444          241 EATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQ  320 (485)
Q Consensus       241 EA~w~~~g~vPsleEYl~~r~~S~g~~~~~~~~~~~~g~~Lp~ev~~~~~~~~L~~~~~~i~rL~NDI~S~~kE~~~G~~  320 (485)
                      ||+|+++|++||+||||++|.+|+|+.++..++++++|...++++.+++.+++|+++++.++||+|||+|+++|+++|++
T Consensus       159 EA~W~~~g~vPt~eEYl~~~~~s~~~~~l~~~~~~~~g~~~~e~~~~~~~~p~l~~~~~~i~RL~NDi~s~~~E~~rG~~  238 (328)
T d5easa2         159 ESTWFIEGYTPPVSEYLSNALATTTYYYLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQI  238 (328)
T ss_dssp             HHHHHHHTCCCCHHHHHHHHTGGGCHHHHHHHHHHTCTTCCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred             HHHHHhCCCCCChHhhhcceeeeehHHHHHHHHHHhCCCCcHHHHHhcccchHHHHHHHHHHHHHhhhHHHHHHhccCCC
Confidence            99999999999999999999999999999999999999866655568899999999999999999999999999999999


Q ss_pred             hhHHH-HHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHhHHHHHHhHhhhhhhhcccC-CCCCCch-hHH
Q 011444          321 NSVIL-YLRENPEADIEDSVAYVRELIATKEKELLEHALMDGFSDLPRPCKQLHLFCMKAFQMFFHSS-NRYDSNT-EMI  397 (485)
Q Consensus       321 ~n~V~-ymke~~g~S~EeAi~~v~~~i~~~~k~ln~~~l~~~~~~vp~~~~~~~ln~aR~~~~~Y~~~-Dg~t~~~-~~k  397 (485)
                      +|.|. ||+|+ |+|+|||++++.++|++.||+||+++++++  ++|.+|+++++|+||+++++|+++ ||||+|+ .+|
T Consensus       239 ~s~I~cym~e~-g~t~EeA~~~i~~~ie~~wk~ln~e~l~~~--~~~~~~~~~~~n~ar~~~~~Y~~~~D~yt~~~~~~k  315 (328)
T d5easa2         239 ATGIECCMRDY-GISTKEAMAKFQNMAETAWKDINEGLLRPT--PVSTEFLTPILNLARIVEVTYIHNLDGYTHPEKVLK  315 (328)
T ss_dssp             TCHHHHHHHHH-TCCHHHHHHHHHHHHHHHHHHHHHHTSSSC--SSCGGGTHHHHHHHHHHHHHTC-----------CCH
T ss_pred             CeeEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCHHHHHHHHHHHHHHHhhcCCCCCCCCCchHHHH
Confidence            99999 99999 999999999999999999999999999874  699999999999999999999876 9999984 699


Q ss_pred             HHHHhhhcccccC
Q 011444          398 DDVQKAFYIPLKL  410 (485)
Q Consensus       398 ~~I~~ll~~pi~~  410 (485)
                      +||++||++|||+
T Consensus       316 ~~i~~ll~epi~~  328 (328)
T d5easa2         316 PHIINLLVDSIKI  328 (328)
T ss_dssp             HHHHHHHTCCCCC
T ss_pred             HHHHHHhccCCcC
Confidence            9999999999996
>d1n1ba2 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]} Back     information, alignment and structure
>d1ps1a_ a.128.1.4 (A:) Pentalenene synthase {Streptomyces sp., UC5319 [TaxId: 1931]} Back     information, alignment and structure
>d1di1a_ a.128.1.4 (A:) Aristolochene synthase {Fungus (Penicillium roqueforti) [TaxId: 5082]} Back     information, alignment and structure
>d1n1ba1 a.102.4.1 (A:64-270) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]} Back     information, alignment and structure
>d1kiya_ a.128.1.5 (A:) Trichodiene synthase {Fusarium sporotrichioides [TaxId: 5514]} Back     information, alignment and structure
>d5easa1 a.102.4.1 (A:24-220) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure