Citrus Sinensis ID: 011483

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480----
MGVYIFFLISVIFCFDVQVLPSPTTGAFQSFNWKSNIGSNDQQSVKQENKNQSDFSFPTQTRPNTTSSIAQQNQPWNYQESTKQDVKLAQSFSTTLQSNNQSNSGFQSDFGNYQHQQSQPIRESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRRSSSSSVNSNAIQASTQHSNEIQDQSYATHGSGQMDSAATPENSSISVGDDDVDQGSQKSKSGGGGAGGGDDFDEDEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRALPDNSSNNNHNSNSNSNNNGTLPVRASAVAHHPNNNSILNPVHNLRVSSSEGQAPYTLEMLQGSGSFGFPGYGNALRSYMNEGQQQDNVLSRAKEEPRDHDTFFESLLF
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEEccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccHHHHHHcccccccccHHcccc
ccEEEEEEcccEEccccccccccccccccccccccccccccHccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccEEccccccccEEEccccccccEEEEEEcccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccEEEEEEcccEEEccccccHEHcccEEEccccccccEEEEccccccccEEEEEccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccHHHHHcc
MGVYIFFLISVIFCfdvqvlpspttgafqsfnwksnigsndqqsvkqenknqsdfsfptqtrpnttssiaqqnqpwnyqestKQDVKLAQSFSTtlqsnnqsnsgfqsdfgnyqhqqsqpireskksddgynwrkygqkqvkgsenprsyykctfpscptkkkversldGQITEIVYkgshnhpkpqstrrsssssvnsnaiqastqhsneiqdqsyathgsgqmdsaatpenssisvgdddvdqgsqksksggggagggddfdedepeakrwkiegesegisapgsrtvreprvvvqttsdidilddgyrwrKYGQkvvkgnpnprsyykcthpgcpvrkhverASHDLRAVITTYegkhnhdvpaargsgsralpdnssnnnhnsnsnsnnngtlpvrasavahhpnnnsilnpvhnlrvsssegqapytlemlqgsgsfgfpgygNALRSYMNEGQQQDNVLSrakeeprdhdtffesllf
MGVYIFFLISVIFCFDVQVLPSPTTGAFQSFNWKSNIGSNDQQSVKQENKNQSDFSFPTQTRPNTTSSIAQQNQPWNYQESTKQDVKLAQSFSTTLQSNNQSNSGFQSDFGNYQHQQSQPireskksddgynWRKYGqkqvkgsenprsyykctfpscptkkkveRSLDGQITEIvykgshnhpkpqstrrsssssvNSNAIQASTQHSNEIQDQSYATHGSGQMDSAATPENSSISVGDDDVDQGSQKsksggggagggddfdeDEPEAKRwkiegesegisapgsrtvreprvvvqttsdidilddgyrwRKYGQKvvkgnpnprsyykCTHPGCPVRKHVERASHDLRAVITtyegkhnhdvpaaRGSGSRALPDNSSNNNHNSNSNSNNNGTLPVRASAVAHHPNNNSILNPVHNLRVSSSEGQAPYTLEMLQGSGSFGFPGYGNALRSYMNEGQQQDNVLSrakeeprdhdtffesllf
MGVYIFFLISVIFCFDVQVLPSPTTGAFQSFNWKSNIGSNDQQSVKQENKNQSDFSFPTQTRPNTTSSIAQQNQPWNYQESTKQDVKLAqsfsttlqsnnqsnsgfqsDFGNYQHQQSQPIRESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSHNHPKPqstrrsssssvnsnaiqasTQHSNEIQDQSYATHGSGQMDSAATPENSSISVGDDDVdqgsqksksggggagggddFDEDEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRALPDnssnnnhnsnsnsnnnGTLPVRASAVAHHPNNNSILNPVHNLRVSSSEGQAPYTLEMLQGSGSFGFPGYGNALRSYMNEGQQQDNVLSRAKEEPRDHDTFFESLLF
**VYIFFLISVIFCFDVQVLPSPTTGAFQSFNWK*******************************************************************************************************************YYKCTFPSC*************ITEIVY*********************************************************************************************************************VVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYE***********************************************************************************FGFPGYG************************************
*G*YIFFLISVIFCFDVQVLPSPTT****************************************************************************************************************************YYKCTFPSCP**********GQITEIVYKGSHNHPKPQSTRRSSSSSVNSNAIQASTQHSNEIQDQSYATHGSGQMDSAATPENSSISVGDDDVDQGSQKSKSGGGGAGGGDDF*************************************SDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNH*****************************************************************************************************************TFFESLLF
MGVYIFFLISVIFCFDVQVLPSPTTGAFQSFNWKSNIGS*********************************NQPWNYQESTKQDVKLAQSFSTTLQSNNQSNSGFQSDFG*****************DGYNWRKYG********NPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGS*******************************IQDQS*****************************************************AKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRALPDNSSNNNHNSNSNSNNNGTLPVRASAVAHHPNNNSILNPVHNLRVSSSEGQAPYTLEMLQGSGSFGFPGYGNALRSYMNEGQQQDNVLSRAKEEPRDHDTFFESLLF
MGVYIFFLISVIFCFDVQVLPSPTTGAFQ************************************************************************************************KSDDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSHN***********************************************************************************************************VREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNH******************************************************************************************************************FF*****
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iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGVYIFFLISVIFCFDVQVLPSPTTGAFQSFNWKSNIGSNDQQSVKQENKNQSDFSFPTQTRPNTTSSIAQQNQPWNYQESTKQDVKLAQSFSTTLQSNNQSNSGFQSDFGNYQHQQSQPIRESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRRSSSSSVNSNAIQASTQHSNEIQDQSYATHGSGQMDSAATPENSSISVGDDDVDQGSQKSKSGGGGAGGGDDFDEDEPEAKRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRALPDNSSNNNHNSNSNSNNNGTLPVRASAVAHHPNNNSILNPVHNLRVSSSEGQAPYTLEMLQGSGSFGFPGYGNALRSYMNEGQQQDNVLSRAKEEPRDHDTFFESLLF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query484 2.2.26 [Sep-21-2011]
Q8S8P5519 Probable WRKY transcripti yes no 0.679 0.633 0.561 5e-98
Q9ZQ70513 Probable WRKY transcripti no no 0.561 0.530 0.530 3e-75
Q9XI90514 Probable WRKY transcripti no no 0.514 0.484 0.533 1e-73
O22921393 Probable WRKY transcripti no no 0.619 0.763 0.485 5e-73
Q9C5T3309 Probable WRKY transcripti no no 0.539 0.844 0.465 3e-72
Q93WV0557 Probable WRKY transcripti no no 0.621 0.540 0.472 2e-71
Q9FG77687 Probable WRKY transcripti no no 0.737 0.519 0.425 6e-70
O65590568 Probable WRKY transcripti no no 0.611 0.521 0.453 6e-64
Q93WU7423 Probable WRKY transcripti no no 0.485 0.555 0.498 4e-60
Q9SI37487 WRKY transcription factor no no 0.590 0.587 0.393 2e-52
>sp|Q8S8P5|WRK33_ARATH Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2 Back     alignment and function desciption
 Score =  358 bits (919), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 210/374 (56%), Positives = 250/374 (66%), Gaps = 45/374 (12%)

Query: 122 RESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSH 181
           RE +K +DGYNWRKYGQKQVKGSENPRSYYKCTFP+CPTKKKVERSL+GQITEIVYKGSH
Sbjct: 178 REQRKGEDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLEGQITEIVYKGSH 237

Query: 182 NHPKPQSTRRSSSSS--VNSNAIQASTQHSNEIQ-DQSYATHGSGQMDSAATPE---NSS 235
           NHPKPQSTRRSSSSS   +S    AS  H+ +   DQ  + +   Q DS    +    +S
Sbjct: 238 NHPKPQSTRRSSSSSSTFHSAVYNASLDHNRQASSDQPNSNNSFHQSDSFGMQQEDNTTS 297

Query: 236 ISVGDDDVDQGSQKSKSGGGGAGGGDDFDEDEPEAKRWKIEGESEGISAPGSRTVREPRV 295
            SVGDD+ +QGS          G        EPEAKRWK + E+ G +  GS+TVREPR+
Sbjct: 298 DSVGDDEFEQGSSIVSRDEEDCGS-------EPEAKRWKGDNETNGGNGGGSKTVREPRI 350

Query: 296 VVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVIT 355
           VVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCT  GCPVRKHVERASHD+RAVIT
Sbjct: 351 VVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTIGCPVRKHVERASHDMRAVIT 410

Query: 356 TYEGKHNHDVPAARGSGSRALPDNSSNNNHNSNSNSNNNGTLPVRASAVAHHPNNNSILN 415
           TYEGKHNHDVPAARGSG            + +N    ++ ++P+R +A+A H N      
Sbjct: 411 TYEGKHNHDVPAARGSG------------YATNRAPQDSSSVPIRPAAIAGHSN------ 452

Query: 416 PVHNLRVSSSEGQAPYTLEMLQGSGSFGFPGYGNALRSYMNEGQQQDNV------LSRAK 469
                   ++  QAPYTL+ML  + +   P +G A+ +  N    Q          SRAK
Sbjct: 453 -------YTTSSQAPYTLQMLHNNNTNTGP-FGYAMNNNNNNSNLQTQQNFVGGGFSRAK 504

Query: 470 EEPRDHDTFFESLL 483
           EEP +  +FF+S +
Sbjct: 505 EEPNEETSFFDSFM 518
Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9ZQ70|WRKY3_ARATH Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1 Back     alignment and function description
>sp|Q9XI90|WRKY4_ARATH Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2 Back     alignment and function description
>sp|O22921|WRK25_ARATH Probable WRKY transcription factor 25 OS=Arabidopsis thaliana GN=WRKY25 PE=1 SV=1 Back     alignment and function description
>sp|Q9C5T3|WRK26_ARATH Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2 Back     alignment and function description
>sp|Q93WV0|WRK20_ARATH Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1 Back     alignment and function description
>sp|Q9FG77|WRKY2_ARATH Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1 Back     alignment and function description
>sp|O65590|WRK34_ARATH Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1 Back     alignment and function description
>sp|Q93WU7|WRK58_ARATH Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=2 Back     alignment and function description
>sp|Q9SI37|WRKY1_ARATH WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query484
183979108 603 DNA-binding protein [Vitis thunbergii] 0.960 0.771 0.632 1e-166
225434421 603 PREDICTED: probable WRKY transcription f 0.960 0.771 0.632 1e-165
356553124575 PREDICTED: probable WRKY transcription f 0.931 0.784 0.645 1e-165
356500910580 PREDICTED: probable WRKY transcription f 0.931 0.777 0.650 1e-163
259121367 595 WRKY transcription factor 1 [(Populus to 0.921 0.749 0.645 1e-162
224146673 603 predicted protein [Populus trichocarpa] 0.935 0.751 0.646 1e-159
259121373 599 WRKY transcription factor 4 [(Populus to 0.927 0.749 0.64 1e-159
359801453 595 WRKY transcription factor 1 [(Populus to 0.921 0.749 0.649 1e-158
224126919 591 predicted protein [Populus trichocarpa] 0.913 0.747 0.649 1e-158
118486984 591 unknown [Populus trichocarpa] 0.913 0.747 0.647 1e-157
>gi|183979108|emb|CAP08303.1| DNA-binding protein [Vitis thunbergii] Back     alignment and taxonomy information
 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 325/514 (63%), Positives = 376/514 (73%), Gaps = 49/514 (9%)

Query: 7   FLISVIFCFDVQVLPSPTTGAF--QSFNWKSNIGSNDQQSVKQENKNQSDFSFPTQTRPN 64
            L S +      +LPSPTTG F  Q FNW+SN  SN QQ VK+E+KN  DFSF  Q RP+
Sbjct: 101 LLDSPVLLSTSNILPSPTTGTFPSQGFNWRSNSNSN-QQDVKREDKNYLDFSFQPQARPS 159

Query: 65  TTSS---------------IAQQNQPWNYQESTKQD--------VKLA----QSFS---T 94
           TTS+               +  Q   W++QE TKQD        VK      QSFS    
Sbjct: 160 TTSASMFQPSTTTITTEQALRGQQPAWSFQEPTKQDSFSSEKTTVKSEFGSYQSFSPEIA 219

Query: 95  TLQSNNQSN----SGFQSDFGNYQHQQSQPIRESKKSDDGYNWRKYGQKQVKGSENPRSY 150
           T+Q+N QSN    +GFQSD+G+Y H  SQ IRE ++S+DGYNWRKYGQKQVKGSENPRSY
Sbjct: 220 TIQTNTQSNGNGNNGFQSDYGSY-HASSQSIREQRRSEDGYNWRKYGQKQVKGSENPRSY 278

Query: 151 YKCTFPSCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRRSSSSSVNSNAIQASTQHSN 210
           YKCT+P+CPTKKKVERSL+GQ+TEIVYKG+HNHPKPQST    SS  +S  IQAS   +N
Sbjct: 279 YKCTYPNCPTKKKVERSLEGQVTEIVYKGTHNHPKPQST--RRSSLSSSQTIQASNPPNN 336

Query: 211 EIQDQSYATHGSGQMDSAATPENSSISVGDDDVDQGSQKSKSGGGGAGGGDDFDEDEPEA 270
           E+ DQ +  HG+GQMDS ATPENSSIS+GDDD +Q SQKSKSGG      DDFDEDEPEA
Sbjct: 337 EVPDQPFVAHGTGQMDSVATPENSSISMGDDDFEQSSQKSKSGG------DDFDEDEPEA 390

Query: 271 KRWKIEGESEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYY 330
           KRWK E E+EGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYY
Sbjct: 391 KRWKKESENEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYY 450

Query: 331 KCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSRALPDNSSNNNHNSNSN 390
           KCT+PGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGS ++       +  + + 
Sbjct: 451 KCTNPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPLPLPDTTAAAT 510

Query: 391 SNNNGTLPVRASAVAHHPNNNSILNPVHNLRVSSSEGQ-APYTLEMLQGSGSFGFPGYGN 449
           +NNN  + +R S + H P NNS  NP+ ++R  +SE Q AP+TLEMLQ    FGF  +GN
Sbjct: 511 TNNNMPMAIRPSTMTHLP-NNSTTNPLRHVRHPTSEAQAAPFTLEMLQSPDGFGFSNFGN 569

Query: 450 ALRSYMNEGQQQDNVLSRAKEEPRDHDTFFESLL 483
           ++ +YMN+ Q QDNV SR KEEPRD D  FESLL
Sbjct: 570 SMATYMNQPQHQDNVFSRTKEEPRD-DMLFESLL 602

Source: Vitis thunbergii

Species: Vitis thunbergii

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225434421|ref|XP_002272040.1| PREDICTED: probable WRKY transcription factor 33-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356553124|ref|XP_003544908.1| PREDICTED: probable WRKY transcription factor 33 [Glycine max] Back     alignment and taxonomy information
>gi|356500910|ref|XP_003519273.1| PREDICTED: probable WRKY transcription factor 33 [Glycine max] Back     alignment and taxonomy information
>gi|259121367|gb|ACV92003.1| WRKY transcription factor 1 [(Populus tomentosa x P. bolleana) x P. tomentosa] Back     alignment and taxonomy information
>gi|224146673|ref|XP_002326093.1| predicted protein [Populus trichocarpa] gi|222862968|gb|EEF00475.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|259121373|gb|ACV92006.1| WRKY transcription factor 4 [(Populus tomentosa x P. bolleana) x P. tomentosa] Back     alignment and taxonomy information
>gi|359801453|gb|AEV66272.1| WRKY transcription factor 1 [(Populus tomentosa x P. bolleana) x P. tomentosa] Back     alignment and taxonomy information
>gi|224126919|ref|XP_002319959.1| predicted protein [Populus trichocarpa] gi|222858335|gb|EEE95882.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118486984|gb|ABK95324.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query484
TAIR|locus:2057212519 WRKY33 "AT2G38470" [Arabidopsi 0.719 0.670 0.509 1.3e-94
TAIR|locus:2177596687 WRKY2 "WRKY DNA-binding protei 0.326 0.229 0.568 1.1e-71
TAIR|locus:2133852557 WRKY20 [Arabidopsis thaliana ( 0.628 0.545 0.446 3.7e-70
TAIR|locus:2014799514 WRKY4 "WRKY DNA-binding protei 0.537 0.505 0.520 1.7e-68
TAIR|locus:2063835513 WRKY3 "WRKY DNA-binding protei 0.706 0.666 0.433 2.4e-67
TAIR|locus:2060805393 WRKY25 "WRKY DNA-binding prote 0.216 0.267 0.695 2.3e-66
TAIR|locus:2169354309 WRKY26 "WRKY DNA-binding prote 0.194 0.304 0.723 2e-65
TAIR|locus:2102147423 WRKY58 "WRKY DNA-binding prote 0.225 0.257 0.678 2.9e-64
TAIR|locus:2131503568 WRKY34 "WRKY DNA-binding prote 0.504 0.429 0.498 1.7e-57
TAIR|locus:2045049487 ZAP1 "zinc-dependent activator 0.214 0.213 0.584 4.8e-54
TAIR|locus:2057212 WRKY33 "AT2G38470" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 858 (307.1 bits), Expect = 1.3e-94, Sum P(2) = 1.3e-94
 Identities = 192/377 (50%), Positives = 217/377 (57%)

Query:     7 FLISVIFCFD-VQVLPSPTTGAFQSFNWKSNIGSNDQQSVKQENKNQSDFSFPTQTR--- 62
             FL S  F      VL SPTTGA  + N  +  G N+       N N  DFSF TQ+    
Sbjct:    69 FLDSPAFVSSSANVLASPTTGALIT-NVTNQKGINEGDKSNNNNFNLFDFSFHTQSSGVS 127

Query:    63 -PNTTSSIAQQNQPWNYQESTKQDVKLAXXXXXXXXXXXXXXXXXXXDFGNYQHQQSQPI 121
              P TT++        N      Q+ +                       G          
Sbjct:   128 APTTTTTTTTTTTTTNSSIFQSQEQQKKNQSEQWSQTETRPNNQAVSYNG---------- 177

Query:   122 RESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSH 181
             RE +K +DGYNWRKYGQKQVKGSENPRSYYKCTFP+CPTKKKVERSL+GQITEIVYKGSH
Sbjct:   178 REQRKGEDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLEGQITEIVYKGSH 237

Query:   182 NHPKPXXXXXXXXXXXXXXXXX--XXTQHSNEIQ-DQSYATHGSGQMDSAATPEN---SS 235
             NHPKP                       H+ +   DQ  + +   Q DS    +    +S
Sbjct:   238 NHPKPQSTRRSSSSSSTFHSAVYNASLDHNRQASSDQPNSNNSFHQSDSFGMQQEDNTTS 297

Query:   236 ISVGDDDVXXXXXXXXXXXXXXXXXXXFDEDEPEAKRWKIEGESEGISAPGSRTVREPRV 295
              SVGDD+                        EPEAKRWK + E+ G +  GS+TVREPR+
Sbjct:   298 DSVGDDEFEQGSSIVSRDEEDCGS-------EPEAKRWKGDNETNGGNGGGSKTVREPRI 350

Query:   296 VVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVIT 355
             VVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCT  GCPVRKHVERASHD+RAVIT
Sbjct:   351 VVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTIGCPVRKHVERASHDMRAVIT 410

Query:   356 TYEGKHNHDVPAARGSG 372
             TYEGKHNHDVPAARGSG
Sbjct:   411 TYEGKHNHDVPAARGSG 427
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS
GO:0042742 "defense response to bacterium" evidence=RCA;IMP
GO:0050832 "defense response to fungus" evidence=RCA;IMP
GO:0010200 "response to chitin" evidence=IEP;RCA
GO:0010120 "camalexin biosynthetic process" evidence=IMP
GO:0006970 "response to osmotic stress" evidence=IEP
GO:0009408 "response to heat" evidence=IEP
GO:0009409 "response to cold" evidence=IEP
GO:0009414 "response to water deprivation" evidence=IEP
GO:0009651 "response to salt stress" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0034605 "cellular response to heat" evidence=IMP
GO:0070370 "cellular heat acclimation" evidence=IMP
GO:0010508 "positive regulation of autophagy" evidence=IMP
GO:0000165 "MAPK cascade" evidence=RCA
GO:0002679 "respiratory burst involved in defense response" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0006944 "cellular membrane fusion" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0035556 "intracellular signal transduction" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
TAIR|locus:2177596 WRKY2 "WRKY DNA-binding protein 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133852 WRKY20 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014799 WRKY4 "WRKY DNA-binding protein 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063835 WRKY3 "WRKY DNA-binding protein 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060805 WRKY25 "WRKY DNA-binding protein 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169354 WRKY26 "WRKY DNA-binding protein 26" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102147 WRKY58 "WRKY DNA-binding protein 58" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2131503 WRKY34 "WRKY DNA-binding protein 34" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045049 ZAP1 "zinc-dependent activator protein-1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8S8P5WRK33_ARATHNo assigned EC number0.56140.67970.6339yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
grail3.0094006501
hypothetical protein (603 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
pfam0310660 pfam03106, WRKY, WRKY DNA -binding domain 2e-37
pfam0310660 pfam03106, WRKY, WRKY DNA -binding domain 1e-35
smart0077459 smart00774, WRKY, DNA binding domain 3e-34
smart0077459 smart00774, WRKY, DNA binding domain 1e-30
>gnl|CDD|145969 pfam03106, WRKY, WRKY DNA -binding domain Back     alignment and domain information 
 Score =  130 bits (330), Expect = 2e-37
 Identities = 42/59 (71%), Positives = 48/59 (81%)

Query: 306 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHD 364
           LDDGY WRKYGQK VKG+P PRSYY+CT PGCPV+K VER+S D + V  TYEG+HNH 
Sbjct: 1   LDDGYNWRKYGQKPVKGSPFPRSYYRCTSPGCPVKKQVERSSDDPQIVEITYEGEHNHP 59

Length = 60
>gnl|CDD|145969 pfam03106, WRKY, WRKY DNA -binding domain Back     alignment and domain information
>gnl|CDD|214815 smart00774, WRKY, DNA binding domain Back     alignment and domain information
>gnl|CDD|214815 smart00774, WRKY, DNA binding domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 484
PF0310660 WRKY: WRKY DNA -binding domain; InterPro: IPR00365 99.96
smart0077459 WRKY DNA binding domain. The WRKY domain is a DNA 99.96
PF0310660 WRKY: WRKY DNA -binding domain; InterPro: IPR00365 99.95
smart0077459 WRKY DNA binding domain. The WRKY domain is a DNA 99.94
PF0450062 FLYWCH: FLYWCH zinc finger domain; InterPro: IPR00 90.83
PF0310191 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 88.03
PF0450062 FLYWCH: FLYWCH zinc finger domain; InterPro: IPR00 85.24
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif Back     alignment and domain information 
Probab=99.96  E-value=3e-31  Score=210.01  Aligned_cols=59  Identities=69%  Similarity=1.379  Sum_probs=52.6

Q ss_pred             CCcCccccccCccccCCCCCCcccccccCCCCCCccchhhccCCCCeEEEEEeeccCCC
Q 011483          306 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHD  364 (484)
Q Consensus       306 ~dDGY~WRKYGQK~IkG~~~PRsYYrCt~~gC~a~K~Ver~~~D~~~~~~tY~G~HnH~  364 (484)
                      |||||+|||||||+|+|+++||+||||++.+|+|+|+|||+.+|+.+|+|||+|+|||+
T Consensus         1 ~~Dgy~WRKYGqK~i~g~~~pRsYYrCt~~~C~akK~Vqr~~~d~~~~~vtY~G~H~h~   59 (60)
T PF03106_consen    1 LDDGYRWRKYGQKNIKGSPYPRSYYRCTHPGCPAKKQVQRSADDPNIVIVTYEGEHNHP   59 (60)
T ss_dssp             --SSS-EEEEEEEEETTTTCEEEEEEEECTTEEEEEEEEEETTCCCEEEEEEES--SS-
T ss_pred             CCCCCchhhccCcccCCCceeeEeeeccccChhheeeEEEecCCCCEEEEEEeeeeCCC
Confidence            58999999999999999999999999999999999999999999999999999999997

The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.
>smart00774 WRKY DNA binding domain Back     alignment and domain information
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif Back     alignment and domain information
>smart00774 WRKY DNA binding domain Back     alignment and domain information
>PF04500 FLYWCH: FLYWCH zinc finger domain; InterPro: IPR007588 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PF03101 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 Phytochrome A is the primary photoreceptor for mediating various far-red light-induced responses in higher plants Back     alignment and domain information
>PF04500 FLYWCH: FLYWCH zinc finger domain; InterPro: IPR007588 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
1wj2_A78 Solution Structure Of The C-Terminal Wrky Domain Of 2e-31
2ayd_A76 Crystal Structure Of The C-Terminal Wrky Domainof A 2e-27
>pdb|1WJ2|A Chain A, Solution Structure Of The C-Terminal Wrky Domain Of Atwrky4 Length = 78 Back     alignment and structure 
Iteration: 1

 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 59/71 (83%), Positives = 66/71 (92%)
Query: 297 VQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITT 356
           VQTTS++D+LDDGYRWRKYGQKVVKGNP PRSYYKCT PGC VRKHVERA+ D +AV+TT
Sbjct: 8   VQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTT 67
Query: 357 YEGKHNHDVPA 367
           YEGKHNHD+PA
Sbjct: 68  YEGKHNHDLPA 78
>pdb|2AYD|A Chain A, Crystal Structure Of The C-Terminal Wrky Domainof Atwrky1, An Sa-Induced And Partially Npr1-Dependent Transcription Factor Length = 76 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
1wj2_A78 Probable WRKY transcription factor 4; DNA-binding 5e-50
1wj2_A78 Probable WRKY transcription factor 4; DNA-binding 3e-28
2ayd_A76 WRKY transcription factor 1; beta strands, zinc fi 2e-47
2ayd_A76 WRKY transcription factor 1; beta strands, zinc fi 2e-28
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A* Length = 78 Back     alignment and structure
 Score =  164 bits (417), Expect = 5e-50
 Identities = 59/77 (76%), Positives = 66/77 (85%)

Query: 291 REPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDL 350
                 VQTTS++D+LDDGYRWRKYGQKVVKGNP PRSYYKCT PGC VRKHVERA+ D 
Sbjct: 2   SSGSSGVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDP 61

Query: 351 RAVITTYEGKHNHDVPA 367
           +AV+TTYEGKHNHD+PA
Sbjct: 62  KAVVTTYEGKHNHDLPA 78
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A* Length = 78 Back     alignment and structure
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana} Length = 76 Back     alignment and structure
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana} Length = 76 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query484
2ayd_A76 WRKY transcription factor 1; beta strands, zinc fi 100.0
1wj2_A78 Probable WRKY transcription factor 4; DNA-binding 100.0
2ayd_A76 WRKY transcription factor 1; beta strands, zinc fi 99.95
1wj2_A78 Probable WRKY transcription factor 4; DNA-binding 99.95
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana} Back     alignment and structure
Probab=100.00  E-value=5.8e-36  Score=245.79  Aligned_cols=76  Identities=67%  Similarity=1.298  Sum_probs=73.4

Q ss_pred             CceeeeccCCCccCCcCccccccCccccCCCCCCcccccccCCCCCCccchhhccCCCCeEEEEEeeccCCCCCCC
Q 011483          293 PRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAA  368 (484)
Q Consensus       293 prvvv~t~s~~~~~dDGY~WRKYGQK~IkG~~~PRsYYrCt~~gC~a~K~Ver~~~D~~~~~~tY~G~HnH~~p~~  368 (484)
                      .||+|+|.+++++++|||+|||||||.|||+++||+|||||++||+|+|+|||+.+|+.+++|||+|+|||+.|++
T Consensus         1 ~r~~v~t~~~~~~~~DGy~WRKYGQK~ikgs~~PRsYYrCt~~gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p~~   76 (76)
T 2ayd_A            1 SRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGKHDHDMPPG   76 (76)
T ss_dssp             CEEEEEEECSSSCCCCSSCEEEEEEECCTTCSSCEEEEEECSTTCCCEEEEEECSSSTTEEEEEEESCCSSCCCCC
T ss_pred             CeEEEEecCCCCcCCCCchhhhCcccccCCCCCceeEeEcCCCCCCceeeEEEECCCCCEEEEEEccCcCCCCCCC
Confidence            3799999999999999999999999999999999999999999999999999999999999999999999999863
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A* Back     alignment and structure
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana} Back     alignment and structure
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 484
d1wj2a_71 g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cr 1e-37
d1wj2a_71 g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cr 5e-27
>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 71 Back     information, alignment and structure

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  129 bits (327), Expect = 1e-37
 Identities = 59/71 (83%), Positives = 66/71 (92%)

Query: 297 VQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITT 356
           VQTTS++D+LDDGYRWRKYGQKVVKGNP PRSYYKCT PGC VRKHVERA+ D +AV+TT
Sbjct: 1   VQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTT 60

Query: 357 YEGKHNHDVPA 367
           YEGKHNHD+PA
Sbjct: 61  YEGKHNHDLPA 71
>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 71 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query484
d1wj2a_71 WRKY DNA-binding protein 4 {Thale cress (Arabidops 100.0
d1wj2a_71 WRKY DNA-binding protein 4 {Thale cress (Arabidops 99.96
>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3e-35  Score=236.67  Aligned_cols=71  Identities=83%  Similarity=1.424  Sum_probs=68.7

Q ss_pred             eeccCCCccCCcCccccccCccccCCCCCCcccccccCCCCCCccchhhccCCCCeEEEEEeeccCCCCCC
Q 011483          297 VQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPA  367 (484)
Q Consensus       297 v~t~s~~~~~dDGY~WRKYGQK~IkG~~~PRsYYrCt~~gC~a~K~Ver~~~D~~~~~~tY~G~HnH~~p~  367 (484)
                      |+|.++++++||||+|||||||.|||+++||+||||++++|+|+|+|||+.+|+.+++|||+|+|||+.|+
T Consensus         1 v~t~~~~~~~dDGy~WRKYGQK~ikgs~~pRsYYrCt~~~C~a~K~Vqr~~~d~~~~~vtY~G~H~h~~Ps   71 (71)
T d1wj2a_           1 VQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPA   71 (71)
T ss_dssp             CCCCCCCCCCCSSSCBCCCEEECCTTCSSCEEEEEEECSSCEEEEEEEEETTTTSEEEEEEESCCSSCCCC
T ss_pred             CccccccccCCCCcEecccCceeccCCCCceEEEEccccCCCCcceEEEEcCCCCEEEEEEeeEeCCCCCC
Confidence            57889999999999999999999999999999999999999999999999999999999999999999884
>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure