Citrus Sinensis ID: 011487

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480----
MFSLPLCSLSISSKKISTMAKYKFMSPLIPVLIVFTFVKDCHSISTAMPPDHPWPAPVPPSPSYIAGPGMDPYTEVTPYPVVPASDPHTAVPTSPVVPAPESYLAVPTIPEFPAPNFSPPVSEPGPTSPEPYPSPPVPRRFRGIKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKILLSIGGGGSDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMNWVSPMCFDYHGSWENFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRTWKLKDPDVNGIGAPALGVGPGDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLSKQASIAWR
cccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccccccccccccccEEEEEEEEEccccEEEEEccccHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccHHHHHHHcccHHHHHcccccccccccccccccccccccccHHHHHHHHHHcccccccEEEEcccccccEEcccccccccccccccccccccEEcHHHHHHcccccccEEEEcccccEEEEEEccEEEEEccHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHcc
cccccEEEEEEccccccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEcccccccccccccccccccEEEEEEEEcccccEEEEcccccHHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHHccHHHHHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHcccccHHHHHHHHcHHHHHEEccccccccccccccccccccccccHHHHHHHHHHccccHHHEEEEEEcEEEEEcEccccccccccEEEEEcccccHHHHHHHHHHHHccccEEEEcccccccEEEEccEEEEcccHHHHHHHHHHHHHHcccEEEEEcHHHcccccccccccHccc
mfslplcslsisSKKISTMAKykfmsplipVLIVFTFVKdchsistamppdhpwpapvppspsyiagpgmdpytevtpypvvpasdphtavptspvvpapesylavptipefpapnfsppvsepgptspepypsppvprrfrgikaaywpsfndfpassidtsyfTHIYYAfllpepktfklNVTLLDHAKLLELVGTLRVQNSHIKILLsiggggsdpnvFSKMASTKETRAIFINSTIEIARKygfdgvdldwefpandqdmSNLALLFKQWRTSINQearitntspLLLTAAVYFASRftiyggprgypIEAINKYMNWvspmcfdyhgswenftglhaalndprsnistsygigswiqagvpaqklvmglplygrtwklkdpdvngigapalgvgpgdgvlTYNQIVKFNMegtaavvfdatpvayhsfagdswigyddVLSIKLKVQFAkskglggyFFWAIgqdkdwtlskqASIAWR
mfslplcsLSISSKKISTMAKYKFMSPLIPVLIVFTFVKDCHSISTamppdhpwpaPVPPSPSYIAGPGMDPYTEVTPYPVVPASDPHTAVPTSPVVPAPESYLAVPTIPEFPAPNFSPPVSEPGPTSPEPYPSPPVPRRFRGIKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKILLsiggggsdpnVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMNWVSPMCFDYHGSWENFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRTWKLKDPDVNGIGapalgvgpgdGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLSkqasiawr
MFslplcslsisskkisTMAKYKFMSPLIPVLIVFTFVKDCHSISTAMppdhpwpapvppspSYIAGPGMDpytevtpypvvpASDphtavptspvvpapESYLAVPTIPEFPAPNFSPPVsepgptspepypsppvpRRFRGIKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKillsiggggsDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMNWVSPMCFDYHGSWENFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRTWKLKDPDVNGIGAPALGVGPGDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLSKQASIAWR
******CSLSISSKKISTMAKYKFMSPLIPVLIVFTFVKDCHSIST**********************************************************************************************FRGIKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKILLSIGGGGSDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMNWVSPMCFDYHGSWENFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRTWKLKDPDVNGIGAPALGVGPGDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLS********
**SLPLCSLSISSKKISTMAKYKFMSPLIPVLIVFTFVKDCHSISTAMPPDHPWPAPVPPSPSYIAGPGMDPYTEVTPYPVVPASDPHTAVPTSPVVPAPESYLAVPTIPEFP**************************RFRGIKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKILLSIGGGGSDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMNWVSPMCFDYHGSWENFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRTWKLKDPDVNGIGAPALGVGPGDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLSKQA*****
MFSLPLCSLSISSKKISTMAKYKFMSPLIPVLIVFTFVKDCHSISTAMPPDHPWPAPVPPSPSYIAGPGMDPYTEVTPYPVVPASDPHTAVPTSPVVPAPESYLAVPTIPEFPAPNFSPP*************SPPVPRRFRGIKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKILLSIGGGGSDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMNWVSPMCFDYHGSWENFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRTWKLKDPDVNGIGAPALGVGPGDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLS********
*FSLPLCSLSISSKKISTMAKYKFMSPLIPVLIVFTFVKDCHSISTAMP*DHPWP*****************************************************************************PSPPVPRRFRGIKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKILLSIGGGGSDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMNWVSPMCFDYHGSWENFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRTWKLKDPDVNGIGAPALGVGPGDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLSKQA*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFSLPLCSLSISSKKISTMAKYKFMSPLIPVLIVFTFVKDCHSISTAMPPDHPWPAPVPPSPSYIAGPGMDPYTEVTPYPVVPASDPHTAVPTSPVVPAPESYLAVPTIPEFPAPNFSPPVSEPGPTSPEPYPSPPVPRRFRGIKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKILLSIGGGGSDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMNWVSPMCFDYHGSWENFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRTWKLKDPDVNGIGAPALGVGPGDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLSKQASIAWR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query484 2.2.26 [Sep-21-2011]
Q95M17472 Acidic mammalian chitinas yes no 0.657 0.673 0.351 7e-49
Q91XA9473 Acidic mammalian chitinas yes no 0.657 0.672 0.348 4e-48
Q9BZP6476 Acidic mammalian chitinas yes no 0.657 0.668 0.337 2e-46
Q6RY07473 Acidic mammalian chitinas yes no 0.657 0.672 0.340 5e-46
Q13231466 Chitotriosidase-1 OS=Homo no no 0.652 0.678 0.322 2e-44
Q91Z98402 Chitinase-3-like protein no no 0.644 0.776 0.327 1e-40
P29030 504 Endochitinase OS=Brugia m N/A no 0.665 0.638 0.331 3e-40
Q29411383 Chitinase-3-like protein no no 0.619 0.783 0.355 6e-40
O35744398 Chitinase-3-like protein no no 0.634 0.771 0.326 6e-40
Q9WTV1381 Chitinase-3-like protein no no 0.628 0.797 0.329 2e-39
>sp|Q95M17|CHIA_BOVIN Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1 Back     alignment and function desciption
 Score =  195 bits (495), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/341 (35%), Positives = 173/341 (50%), Gaps = 23/341 (6%)

Query: 146 AAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSH 205
           A Y P    F   +ID    TH+ YAF        ++     +   L      L+ +NS 
Sbjct: 32  AQYRPGLGSFKPDNIDPCLCTHLIYAF--AGMSNSEITTIEWNDVALYSSFNDLKKKNSQ 89

Query: 206 IKILLSIGGGGSDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPAN----D 261
           +KILL+IGG       F+ M +T E R  FI+S I+   +YGFDG+D DWE+P       
Sbjct: 90  LKILLAIGGWNFGTAPFTAMVATPENRKTFISSVIKFLHQYGFDGLDFDWEYPGFRGSPS 149

Query: 262 QDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMN 321
           QD     +L ++ R +  QEA+ TN   LL+TAAV       I     GY I  +++Y++
Sbjct: 150 QDKHLFTVLVQETREAFEQEAKQTNKPRLLVTAAVAAG----ISNIQAGYEIPQLSQYLD 205

Query: 322 WVSPMCFDYHGSWENFTGLHAAL----NDPRSN--ISTSYGIGSWIQAGVPAQKLVMGLP 375
           ++  M +D+HGSWE +TG ++ L     D  SN  ++  Y +  W + G PA+KL++G P
Sbjct: 206 FIHVMTYDFHGSWEGYTGENSPLYKYPTDTGSNTYLNVEYAMNYWKKNGAPAEKLIIGFP 265

Query: 376 LYGRTWKLKDPDVNGIGAPALGVGPGD------GVLTYNQIVKFNMEGTAAVVFDATPVA 429
            YG  + L+D   NGIGAP  G GP        G   Y +I  F  +G      D+  V 
Sbjct: 266 AYGHNFILRDASNNGIGAPTSGAGPAGPYTREAGFWAYYEICAFLKDGATEAWDDSQNVP 325

Query: 430 YHSFAGDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQD 470
           Y ++ G  W+GYD+V S ++K Q+ K    GG   WAI  D
Sbjct: 326 Y-AYKGTEWVGYDNVNSFRIKAQWLKENNFGGAMVWAIDLD 365
Degrades chitin and chitotriose. May participate in the defense against nematodes, fungi and other pathogens. Plays a role in T-helper cell type 2 (Th2) immune response. Contributes to the response to IL-13 and inflammation in response to IL-13. Stimulates chemokine production by pulmonary epithelial cells. Protects lung epithelial cells against apoptosis and promotes phosphorylation of AKT1. Its function in the inflammatory response and in protecting cells against apoptosis is inhibited by allosamidin, suggesting that the function of this protein depends on carbohydrate binding.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4
>sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2 Back     alignment and function description
>sp|Q9BZP6|CHIA_HUMAN Acidic mammalian chitinase OS=Homo sapiens GN=CHIA PE=1 SV=1 Back     alignment and function description
>sp|Q6RY07|CHIA_RAT Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1 Back     alignment and function description
>sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 Back     alignment and function description
>sp|Q91Z98|CH3L4_MOUSE Chitinase-3-like protein 4 OS=Mus musculus GN=Chi3l4 PE=1 SV=2 Back     alignment and function description
>sp|P29030|CHIT_BRUMA Endochitinase OS=Brugia malayi PE=1 SV=1 Back     alignment and function description
>sp|Q29411|CH3L1_PIG Chitinase-3-like protein 1 OS=Sus scrofa GN=CHI3L1 PE=1 SV=2 Back     alignment and function description
>sp|O35744|CH3L3_MOUSE Chitinase-3-like protein 3 OS=Mus musculus GN=Chi3l3 PE=1 SV=2 Back     alignment and function description
>sp|Q9WTV1|CH3L1_RAT Chitinase-3-like protein 1 OS=Rattus norvegicus GN=Chi3l1 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query484
224089338497 predicted protein [Populus trichocarpa] 0.873 0.851 0.574 1e-137
224089342431 predicted protein [Populus trichocarpa] 0.830 0.932 0.563 1e-130
255548784517 chitinase, putative [Ricinus communis] g 0.940 0.880 0.483 1e-125
356563922381 PREDICTED: acidic mammalian chitinase-li 0.704 0.895 0.591 1e-118
359484767 717 PREDICTED: probable chitinase 3-like [Vi 0.727 0.490 0.559 1e-111
147787798 618 hypothetical protein VITISV_036053 [Viti 0.727 0.569 0.557 1e-111
224142433380 predicted protein [Populus trichocarpa] 0.702 0.894 0.568 1e-109
296084601357 unnamed protein product [Vitis vinifera] 0.719 0.974 0.568 1e-109
296084602373 unnamed protein product [Vitis vinifera] 0.702 0.911 0.545 1e-105
449457929378 PREDICTED: acidic mammalian chitinase-li 0.710 0.910 0.519 1e-104
>gi|224089338|ref|XP_002308695.1| predicted protein [Populus trichocarpa] gi|222854671|gb|EEE92218.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/435 (57%), Positives = 315/435 (72%), Gaps = 12/435 (2%)

Query: 57  PVPPSPSYIAGPGMDPYTEVTPYPVVPASDP--HTAVPTSPV--VPAPESYLAVPTIPE- 111
           P P +PSY A P    Y   T  P+ PA  P  +  +P +P   VP+P +  A P +P  
Sbjct: 66  PEPVTPSYPAVPATPSYPPQTAPPMKPAPSPAYYLPIPAAPSYSVPSPSAVPAYPGVPAS 125

Query: 112 ---FPAPNFSPPVSEPGPTSPEPYPSPPVPRRFRGIKAAYWPSFNDFPASSIDTSYFTHI 168
               P P  SP    P P SPEPYPSPP     +GIK AYWPSF+ F ASSIDTSYFTHI
Sbjct: 126 SPPLPTPAASPVSYPPVPASPEPYPSPP---DHKGIKGAYWPSFDGFEASSIDTSYFTHI 182

Query: 169 YYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKILLSIGGGGSD-PNVFSKMAS 227
           +YAFLLP+P TFKLNVT  D  K+   +  LR +N  +K LLS+GGG      +F+ ++ 
Sbjct: 183 FYAFLLPDPVTFKLNVTPFDQQKIPGFIQNLRTRNPPVKTLLSMGGGSDAIALIFANLSG 242

Query: 228 TKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNT 287
            +ETR +FI+STIE+AR YGFDG+DLDWE+PANDQ+M NLALL K+W  ++  EA  +  
Sbjct: 243 AQETRKVFIDSTIEVARTYGFDGLDLDWEYPANDQEMINLALLVKEWHEALVHEASASGK 302

Query: 288 SPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMNWVSPMCFDYHGSWENFTGLHAALNDP 347
             LLLTAAVY++S+FT +G PR YP ++INKY++W++PMC+DYHG+WENFTG +AAL DP
Sbjct: 303 PRLLLTAAVYYSSQFTTFGLPRSYPADSINKYVDWINPMCYDYHGTWENFTGPNAALYDP 362

Query: 348 RSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRTWKLKDPDVNGIGAPALGVGPGDGVLTY 407
           +SN+STS+GIGSWIQAGV  +KLVMGLPLYGRTWKL DP+VNGIGA A+G GP DG+L Y
Sbjct: 363 KSNVSTSFGIGSWIQAGVSPKKLVMGLPLYGRTWKLLDPNVNGIGARAVGKGPEDGILDY 422

Query: 408 NQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAI 467
            Q+++FN E  A V FD   V+Y+S+AG  W+GYDD ++I  KVQFA+S+GLGGYFFWA+
Sbjct: 423 YQVLEFNKENNAIVNFDGQTVSYYSYAGGFWVGYDDSITIDWKVQFARSRGLGGYFFWAL 482

Query: 468 GQDKDWTLSKQASIA 482
           GQDKDW +SKQ   A
Sbjct: 483 GQDKDWIISKQGKDA 497

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224089342|ref|XP_002308697.1| predicted protein [Populus trichocarpa] gi|222854673|gb|EEE92220.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255548784|ref|XP_002515448.1| chitinase, putative [Ricinus communis] gi|223545392|gb|EEF46897.1| chitinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356563922|ref|XP_003550206.1| PREDICTED: acidic mammalian chitinase-like [Glycine max] Back     alignment and taxonomy information
>gi|359484767|ref|XP_002263220.2| PREDICTED: probable chitinase 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147787798|emb|CAN60686.1| hypothetical protein VITISV_036053 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224142433|ref|XP_002324562.1| predicted protein [Populus trichocarpa] gi|222865996|gb|EEF03127.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296084601|emb|CBI25622.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|296084602|emb|CBI25623.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449457929|ref|XP_004146700.1| PREDICTED: acidic mammalian chitinase-like [Cucumis sativus] gi|449527432|ref|XP_004170715.1| PREDICTED: acidic mammalian chitinase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query484
TAIR|locus:2134015398 AT4G19800 [Arabidopsis thalian 0.688 0.836 0.389 4.5e-66
TAIR|locus:2134025379 ChiC "class V chitinase" [Arab 0.690 0.881 0.388 1.2e-63
TAIR|locus:2133940362 AT4G19750 [Arabidopsis thalian 0.690 0.922 0.372 8.1e-60
TAIR|locus:2133955369 AT4G19760 [Arabidopsis thalian 0.667 0.875 0.370 5.3e-56
TAIR|locus:2134030366 AT4G19820 [Arabidopsis thalian 0.694 0.918 0.347 3e-53
TAIR|locus:2134010363 AT4G19720 [Arabidopsis thalian 0.679 0.906 0.365 3.5e-52
UNIPROTKB|F1MH27472 CHIA "Acidic mammalian chitina 0.663 0.680 0.339 8.8e-47
UNIPROTKB|Q95M17472 CHIA "Acidic mammalian chitina 0.663 0.680 0.339 1.8e-46
TAIR|locus:2133970261 AT4G19770 [Arabidopsis thalian 0.520 0.965 0.410 2.3e-46
UNIPROTKB|E1BZP3473 CHIA "Uncharacterized protein" 0.661 0.676 0.338 1e-45
TAIR|locus:2134015 AT4G19800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 132/339 (38%), Positives = 199/339 (58%)

Query:   144 IKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQN 203
             +KA+YW    DFPA+ ID+S FTH++  F   E +++++ +   + A       T++ +N
Sbjct:     7 VKASYWFPATDFPATDIDSSLFTHLFCTFADLEAESYEITIATWNQAPFHAFTETVQQRN 66

Query:   204 SHIKXXXXXXXXXXDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQD 263
              H+K          D + F+ MAS  ++RA FI STI +AR YGF G+DLDWE+P N+++
Sbjct:    67 PHVKTLLSIGGGNADKDAFASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNEEE 126

Query:   264 MSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMNWV 323
             M +   L ++WR+++  E+  + T+ L+LTAAVY++S +   G P  YP+ AI+  ++W+
Sbjct:   127 MYDFGKLLEEWRSAVEAESNSSGTTALILTAAVYYSSNYQ--GVP--YPVLAISNSLDWI 182

Query:   324 SPMCFDYHG-SWENFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRTWK 382
             + M +D++G  W   TG  A+L  P    S   G+  W +AG+PA+K V+G P YG  W 
Sbjct:   183 NLMAYDFYGPGWSTVTGPPASLYLPTDGRSGDSGVRDWTEAGLPAKKAVLGFPYYGWAWT 242

Query:   383 LKDPDVNGIGAPALGVG-PGDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGY 441
             L DPDVNG  A   G     DG ++Y Q+  + ++  A  V D   V  + +AG +WIGY
Sbjct:   243 LADPDVNGYDANTTGPAISDDGEISYRQLQTWIVDNGATKVHDDMMVGDYCYAGTTWIGY 302

Query:   442 DDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLSKQAS 480
             D   SI  KV +AK KGL GYF W +G D +  LS   S
Sbjct:   303 DSEKSIVTKVIYAKQKGLLGYFSWHVGGDDNSELSSAGS 341
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0004568 "chitinase activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
TAIR|locus:2134025 ChiC "class V chitinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133940 AT4G19750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133955 AT4G19760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134030 AT4G19820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134010 AT4G19720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1MH27 CHIA "Acidic mammalian chitinase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q95M17 CHIA "Acidic mammalian chitinase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
TAIR|locus:2133970 AT4G19770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1BZP3 CHIA "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.96LOW CONFIDENCE prediction!
3rd Layer3.2.1.14LOW CONFIDENCE prediction!
3rd Layer3.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_VI001880
hypothetical protein (497 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
cd02879299 cd02879, GH18_plant_chitinase_class_V, The class V 1e-131
smart00636334 smart00636, Glyco_18, Glyco_18 domain 1e-95
cd02872362 cd02872, GH18_chitolectin_chitotriosidase, This co 7e-92
pfam00704325 pfam00704, Glyco_hydro_18, Glycosyl hydrolases fam 2e-86
cd06548322 cd06548, GH18_chitinase, The GH18 (glycosyl hydrol 1e-72
COG3325441 COG3325, ChiA, Chitinase [Carbohydrate transport a 2e-46
cd00598210 cd00598, GH18_chitinase-like, The GH18 (glycosyl h 3e-31
cd02878345 cd02878, GH18_zymocin_alpha, Zymocin, alpha subuni 3e-26
cd02873413 cd02873, GH18_IDGF, The IDGF's (imaginal disc grow 1e-25
cd02874313 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragm 2e-24
cd06545253 cd06545, GH18_3CO4_chitinase, The Bacteroides thet 3e-16
COG3858423 COG3858, COG3858, Predicted glycosyl hydrolase [Ge 2e-11
cd02871312 cd02871, GH18_chitinase_D-like, GH18 domain of Chi 1e-06
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 9e-06
PRK14951618 PRK14951, PRK14951, DNA polymerase III subunits ga 5e-05
PHA03247 3151 PHA03247, PHA03247, large tegument protein UL36; P 1e-04
PRK14950585 PRK14950, PRK14950, DNA polymerase III subunits ga 1e-04
cd02875358 cd02875, GH18_chitobiase, Chitobiase (also known a 1e-04
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 2e-04
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 4e-04
cd00598210 cd00598, GH18_chitinase-like, The GH18 (glycosyl h 5e-04
cd06546256 cd06546, GH18_CTS3_chitinase, GH18 domain of CTS3 7e-04
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 0.001
pfam04652315 pfam04652, DUF605, Vta1 like 0.001
pfam12526115 pfam12526, DUF3729, Protein of unknown function (D 0.002
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 0.003
PHA03307 1352 PHA03307, PHA03307, transcriptional regulator ICP4 0.003
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 0.004
>gnl|CDD|119358 cd02879, GH18_plant_chitinase_class_V, The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information 
 Score =  382 bits (983), Expect = e-131
 Identities = 157/335 (46%), Positives = 212/335 (63%), Gaps = 41/335 (12%)

Query: 144 IKAAYWPSF-NDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQ 202
           +K  YWP++  +FP S+ID+S FTH++YAF   +P T+++ ++  D ++      T++ +
Sbjct: 4   VKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETVKRK 63

Query: 203 NSHIKILLSIGGGGSDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQ 262
           N  +K LLSIGGGGSD + F+ MAS    R  FINS+I++ARKYGFDG+DLDWEFP++  
Sbjct: 64  NPSVKTLLSIGGGGSDSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPSSQV 123

Query: 263 DMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMNW 322
           +M N   L ++WR ++  EAR +   PLLLTAAVYF+    +      YPIEAINK ++W
Sbjct: 124 EMENFGKLLEEWRAAVKDEARSSGRPPLLLTAAVYFSPILFLSDDSVSYPIEAINKNLDW 183

Query: 323 VSPMCFDYHGSWE-NFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRTW 381
           V+ M +DY+GSWE N TG  AAL DP SN+ST YGI SWI+AGVPA+KLV+GLPLYGR W
Sbjct: 184 VNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPAKKLVLGLPLYGRAW 243

Query: 382 KLKDPDVNGIGAPALGVGPGDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGY 441
            L                                       +D T V+ + +AG +WIGY
Sbjct: 244 TL---------------------------------------YDTTTVSSYVYAGTTWIGY 264

Query: 442 DDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLS 476
           DDV SI +KV++AK KGL GYF WA+G D +  LS
Sbjct: 265 DDVQSIAVKVKYAKQKGLLGYFAWAVGYDDNNWLS 299

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. Length = 299
>gnl|CDD|214753 smart00636, Glyco_18, Glyco_18 domain Back     alignment and domain information
>gnl|CDD|119351 cd02872, GH18_chitolectin_chitotriosidase, This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information
>gnl|CDD|216071 pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18 Back     alignment and domain information
>gnl|CDD|119365 cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>gnl|CDD|225862 COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>gnl|CDD|119357 cd02878, GH18_zymocin_alpha, Zymocin, alpha subunit Back     alignment and domain information
>gnl|CDD|119352 cd02873, GH18_IDGF, The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>gnl|CDD|119353 cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>gnl|CDD|119362 cd06545, GH18_3CO4_chitinase, The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>gnl|CDD|226376 COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information
>gnl|CDD|119350 cd02871, GH18_chitinase_D-like, GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|119354 cd02875, GH18_chitobiase, Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|119349 cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>gnl|CDD|119363 cd06546, GH18_CTS3_chitinase, GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|218191 pfam04652, DUF605, Vta1 like Back     alignment and domain information
>gnl|CDD|152960 pfam12526, DUF3729, Protein of unknown function (DUF3729) Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 484
cd02879299 GH18_plant_chitinase_class_V The class V plant chi 100.0
cd02872362 GH18_chitolectin_chitotriosidase This conserved do 100.0
cd02873413 GH18_IDGF The IDGF's (imaginal disc growth factors 100.0
smart00636334 Glyco_18 Glycosyl hydrolase family 18. 100.0
cd02878345 GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin 100.0
KOG2806432 consensus Chitinase [Carbohydrate transport and me 100.0
COG3325441 ChiA Chitinase [Carbohydrate transport and metabol 100.0
cd06548322 GH18_chitinase The GH18 (glycosyl hydrolases, fami 100.0
PF00704343 Glyco_hydro_18: Glycosyl hydrolases family 18; Int 100.0
cd02876318 GH18_SI-CLP Stabilin-1 interacting chitinase-like 100.0
cd02875358 GH18_chitobiase Chitobiase (also known as di-N-ace 100.0
cd02874313 GH18_CFLE_spore_hydrolase Cortical fragment-lytic 100.0
cd06549298 GH18_trifunctional GH18 domain of an uncharacteriz 100.0
cd06545253 GH18_3CO4_chitinase The Bacteroides thetaiotaomicr 100.0
cd00598210 GH18_chitinase-like The GH18 (glycosyl hydrolase, 100.0
COG3858423 Predicted glycosyl hydrolase [General function pre 100.0
cd06546256 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 100.0
cd06544253 GH18_narbonin Narbonin is a plant 2S protein from 100.0
cd02871312 GH18_chitinase_D-like GH18 domain of Chitinase D ( 100.0
KOG2091392 consensus Predicted member of glycosyl hydrolase f 99.94
cd06542255 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases 99.94
cd02877280 GH18_hevamine_XipI_class_III This conserved domain 99.92
cd06543294 GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch 99.9
COG3469332 Chitinase [Carbohydrate transport and metabolism] 99.85
KOG4701 568 consensus Chitinase [Cell wall/membrane/envelope b 99.45
cd06547339 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENG 98.61
PF03644311 Glyco_hydro_85: Glycosyl hydrolase family 85 ; Int 98.01
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 97.93
PF13200316 DUF4015: Putative glycosyl hydrolase domain 97.65
PF11340181 DUF3142: Protein of unknown function (DUF3142); In 97.37
KOG2331 526 consensus Predicted glycosylhydrolase [General fun 96.74
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 96.06
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 92.93
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 92.61
cd02930353 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin 92.48
cd04734343 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN 92.41
COG1306400 Uncharacterized conserved protein [Function unknow 92.27
PF14883294 GHL13: Hypothetical glycosyl hydrolase family 13 91.94
TIGR02103 898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 91.67
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 91.21
PRK10785598 maltodextrin glucosidase; Provisional 90.66
KOG1924 1102 consensus RhoA GTPase effector DIA/Diaphanous [Sig 90.51
cd02932336 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN 90.31
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 89.9
PRK12568730 glycogen branching enzyme; Provisional 89.41
PRK12313633 glycogen branching enzyme; Provisional 89.21
PRK14706639 glycogen branching enzyme; Provisional 89.03
PRK05402726 glycogen branching enzyme; Provisional 88.97
cd04733338 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN 88.68
PLN02960897 alpha-amylase 88.67
TIGR02100 688 glgX_debranch glycogen debranching enzyme GlgX. Th 87.54
PF13199559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 87.36
PLN02877 970 alpha-amylase/limit dextrinase 86.59
TIGR02102 1111 pullulan_Gpos pullulanase, extracellular, Gram-pos 85.79
PRK03705658 glycogen debranching enzyme; Provisional 85.28
PF14488166 DUF4434: Domain of unknown function (DUF4434) 85.03
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 84.7
COG1649418 Uncharacterized protein conserved in bacteria [Fun 84.26
cd02931382 ER_like_FMN Enoate reductase (ER)-like FMN-binding 84.02
PLN03244 872 alpha-amylase; Provisional 83.67
TIGR02456 539 treS_nterm trehalose synthase. Trehalose synthase 82.8
cd04735353 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN 82.51
PLN02447 758 1,4-alpha-glucan-branching enzyme 82.11
PRK147051224 glycogen branching enzyme; Provisional 81.97
cd02803327 OYE_like_FMN_family Old yellow enzyme (OYE)-like F 81.83
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 81.49
PRK09441479 cytoplasmic alpha-amylase; Reviewed 81.48
cd02929370 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) 80.9
PF07364292 DUF1485: Protein of unknown function (DUF1485); In 80.17
COG4724 553 Endo-beta-N-acetylglucosaminidase D [Carbohydrate 80.15
PRK14582671 pgaB outer membrane N-deacetylase; Provisional 80.13
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 80.01
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes Back     alignment and domain information 
Probab=100.00  E-value=1.3e-63  Score=499.44  Aligned_cols=294  Identities=53%  Similarity=0.987  Sum_probs=264.8

Q ss_pred             eEEEEEecCCC-CCCCCCCCCCCccEEEEeeeeeeCCCCEEEEcCcChHHHHHHHHHHHhhCCCcEEEEEECCCCCCchh
Q 011487          143 GIKAAYWPSFN-DFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKILLSIGGGGSDPNV  221 (484)
Q Consensus       143 ~i~~gY~~~~~-~~~~~~i~~~~~ThIi~af~~i~~~gg~l~~~~~~~~~~~~~i~~lk~~n~~~KvllSIGG~~~~~~~  221 (484)
                      .+++|||++|. .+.+++|+.++||||+|+|+.++++++.+...+.....+.++++.+|++++++|+|+|||||+.++..
T Consensus         3 ~~~~~Y~~~w~~~~~~~~i~~~~~THi~yaf~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~lkvlisiGG~~~~s~~   82 (299)
T cd02879           3 IVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETVKRKNPSVKTLLSIGGGGSDSSA   82 (299)
T ss_pred             eEEEEEECCCCCCCChhHCCcccCCEEEEEEEEecCCCCEEeeccccHHHHHHHHHHHHHhCCCCeEEEEEeCCCCCCch
Confidence            57899999877 89999999999999999999999888788877656667888888999999999999999999876789


Q ss_pred             hhhhcCCHHHHHHHHHHHHHHHHHhCCCeeEEeecCCCChhhHHHHHHHHHHHHHHhHHhhhhcCCCCeEEEEEeccccc
Q 011487          222 FSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASR  301 (484)
Q Consensus       222 f~~l~~~~~~r~~fi~si~~~l~~ygfDGIDIDwE~p~~~~~~~~~~~flk~Lr~~l~~~~~~~~~~~~~Lsvav~~~~~  301 (484)
                      |+.++++++.|++||+++++++++|||||||||||+|...+++++|+.||++||++|+++++.+++++++|+++++....
T Consensus        83 fs~~~~~~~~R~~fi~siv~~l~~~~fDGidiDWE~P~~~~d~~n~~~ll~elr~~l~~~~~~~~~~~~~ls~av~~~~~  162 (299)
T cd02879          83 FAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPSSQVEMENFGKLLEEWRAAVKDEARSSGRPPLLLTAAVYFSPI  162 (299)
T ss_pred             hhHHhCCHHHHHHHHHHHHHHHHHhCCCceeecccCCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcEEEEeecccchh
Confidence            99999999999999999999999999999999999998788999999999999999998877777778999999986544


Q ss_pred             ccccCCCCCcChhhhhccCceEEeeeccCCCCCCC-CCCCCCccCCCCCCccHHHHHHHHHHcCCCCCCEeecCccceee
Q 011487          302 FTIYGGPRGYPIEAINKYMNWVSPMCFDYHGSWEN-FTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGRT  380 (484)
Q Consensus       302 ~~~~~~~~~~d~~~l~~~vD~v~lm~YD~~g~w~~-~~g~~spl~~~~~~~~~~~~v~~~~~~Gvp~~KlvLGlp~YG~~  380 (484)
                      ..+......||+++|.++|||||||+|||||.|.. .+++++|||......+++.+|+.|++.|+|++||+||||||||.
T Consensus       163 ~~~~~~~~~yd~~~l~~~vD~i~vMtYD~~g~~~~~~~~~~a~l~~~~~~~~~~~~v~~~~~~g~p~~KlvlGvp~YGr~  242 (299)
T cd02879         163 LFLSDDSVSYPIEAINKNLDWVNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPAKKLVLGLPLYGRA  242 (299)
T ss_pred             hccccccccCCHHHHHhhCCEEEEEeecccCCCCCCCCCCCCcCCCCCCCCCHHHHHHHHHHcCCCHHHEEEEecccccc
Confidence            31111246789999999999999999999999984 57899999977667899999999999999999999999999999


Q ss_pred             eeecCCCCCCCCCCcCCCCCCCcccchHHHHHHhhcCCceEEEcCCCceeEEEeCCEEEEECCHHHHHHHHHHHHHCCCc
Q 011487          381 WKLKDPDVNGIGAPALGVGPGDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLSIKLKVQFAKSKGLG  460 (484)
Q Consensus       381 ~~~~~~~~~~~~~~~~g~~~~~g~~~y~ei~~~l~~~g~~~~~D~~s~~~y~y~~~~~isydd~~Sl~~K~~~ak~~gLg  460 (484)
                      |++                                       ||+.+.++|.|++++||+|||++|+++|++||+++|||
T Consensus       243 ~~~---------------------------------------~D~~~~~~y~~~~~~wi~ydd~~Si~~K~~~a~~~~lg  283 (299)
T cd02879         243 WTL---------------------------------------YDTTTVSSYVYAGTTWIGYDDVQSIAVKVKYAKQKGLL  283 (299)
T ss_pred             ccc---------------------------------------cCCCcceEEEEECCEEEEeCCHHHHHHHHHHHHhCCCC
Confidence            952                                       78888899999999999999999999999999999999


Q ss_pred             EEEEEecCCCCcchH
Q 011487          461 GYFFWAIGQDKDWTL  475 (484)
Q Consensus       461 Gv~iW~l~~DD~~~l  475 (484)
                      |+|+|++++||+..|
T Consensus       284 Gv~~W~l~~Dd~~~~  298 (299)
T cd02879         284 GYFAWAVGYDDNNWL  298 (299)
T ss_pred             eEEEEEeecCCcccc
Confidence            999999999987654

The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases Back     alignment and domain information
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster Back     alignment and domain information
>smart00636 Glyco_18 Glycosyl hydrolase family 18 Back     alignment and domain information
>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit Back     alignment and domain information
>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites Back     alignment and domain information
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome Back     alignment and domain information
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes Back     alignment and domain information
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination Back     alignment and domain information
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain Back     alignment and domain information
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas Back     alignment and domain information
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods Back     alignment and domain information
>COG3858 Predicted glycosyl hydrolase [General function prediction only] Back     alignment and domain information
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii Back     alignment and domain information
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L Back     alignment and domain information
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) Back     alignment and domain information
>KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins Back     alignment and domain information
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain Back     alignment and domain information
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain Back     alignment and domain information
>COG3469 Chitinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins Back     alignment and domain information
>PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PF11340 DUF3142: Protein of unknown function (DUF3142); InterPro: IPR021488 This bacterial family of proteins has no known function Back     alignment and domain information
>KOG2331 consensus Predicted glycosylhydrolase [General function prediction only] Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>COG1306 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF14883 GHL13: Hypothetical glycosyl hydrolase family 13 Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2 Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>PRK03705 glycogen debranching enzyme; Provisional Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4 Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain Back     alignment and domain information
>PF07364 DUF1485: Protein of unknown function (DUF1485); InterPro: IPR015995 Proteins in this entry are involved in degradation of the cyanobacterial heptapeptide hepatotoxin microcystin LR, and are encoded in the mlr gene cluster [] Back     alignment and domain information
>COG4724 Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14582 pgaB outer membrane N-deacetylase; Provisional Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
3alf_A353 Crystal Structure Of Class V Chitinase From Nicotia 2e-67
3alg_A353 Crystal Structure Of Class V Chitinase (E115q Mutan 4e-67
3aqu_A356 Crystal Structure Of A Class V Chitinase From Arabi 2e-65
3fxy_A395 Acidic Mammalian Chinase, Catalytic Domain Length = 2e-43
2ybt_A381 Crystal Structure Of Human Acidic Chitinase In Comp 2e-43
1lg1_A365 Crystal Structure Of Human Chitotriosidase In Compl 2e-41
1hki_A365 Crystal Structure Of Human Chitinase In Complex Wit 2e-41
1waw_A445 Specificity And Affinity Of Natural Product Cyclope 2e-41
1hkk_A364 High Resoultion Crystal Structure Of Human Chitinas 2e-41
1guv_A366 Structure Of Human Chitotriosidase Length = 366 4e-41
1e9l_A377 The Crystal Structure Of Novel Mammalian Lectin Ym1 3e-38
1syt_A361 Crystal Structure Of Signalling Protein From Goat S 2e-37
1xhg_A361 Crystal Structure Of A 40 Kda Signalling Protein Fr 3e-37
1zbv_A361 Crystal Structure Of The Goat Signalling Protein (S 3e-37
2pi6_A361 Crystal Structure Of The Sheep Signalling Glycoprot 4e-37
1ljy_A361 Crystal Structure Of A Novel Regulatory 40 Kda Mamm 1e-36
1sr0_A361 Crystal Structure Of Signalling Protein From Sheep( 1e-36
1hjv_A362 Crystal Structure Of Hcgp-39 In Complex With Chitin 3e-36
4ay1_A365 Human Ykl-39 Is A Pseudo-Chitinase With Retained Ch 5e-36
1tfv_A361 Crystal Structure Of A Buffalo Signaling Glycoprote 1e-35
2esc_A361 Crystal Structure Of A 40 Kda Protective Signalling 2e-35
1owq_A361 Crystal Structure Of A 40 Kda Signalling Protein (S 4e-35
3g6l_A406 The Crystal Structure Of A Chitinase Crchi1 From Th 4e-29
1itx_A419 Catalytic Domain Of Chitinase A1 From Bacillus Circ 2e-28
1d2k_A392 C. Immitis Chitinase 1 At 2.2 Angstroms Resolution 9e-27
1ll7_A392 Structure Of The E171q Mutant Of C. Immitis Chitina 2e-26
1ll6_A392 Structure Of The D169n Mutant Of C. Immitis Chitina 3e-26
1w9p_A433 Specificity And Affinity Of Natural Product Cyclope 1e-24
1wno_A395 Crystal Structure Of A Native Chitinase From Asperg 3e-24
1ffr_A540 Crystal Structure Of Chitinase A Mutant Y390f Compl 1e-16
1rd6_A563 Crystal Structure Of S. Marcescens Chitinase A Muta 1e-16
2wly_A548 Chitinase A From Serratia Marcescens Atcc990 In Com 1e-16
2wk2_A540 Chitinase A From Serratia Marcescens Atcc990 In Com 1e-16
1e15_A499 Chitinase B From Serratia Marcescens Length = 499 1e-16
1e6z_A498 Chitinase B From Serratia Marcescens Wildtype In Co 1e-16
1ctn_A540 Crystal Structure Of A Bacterial Chitinase At 2.3 A 2e-16
1edq_A540 Crystal Structure Of Chitinase A From S. Marcescens 2e-16
1e6n_B499 Chitinase B From Serratia Marcescens Inactive Mutan 3e-16
1h0g_A499 Complex Of A Chitinase With The Natural Product Cyc 4e-16
1ur9_A499 Interactions Of A Family 18 Chitinase With The Desi 4e-16
1ogb_A499 Chitinase B From Serratia Marcescens Mutant D142n L 4e-16
1goi_A499 Crystal Structure Of The D140n Mutant Of Chitinase 4e-16
1ehn_A540 Crystal Structure Of Chitinase A Mutant E315q Compl 6e-16
1nh6_A540 Structure Of S. Marcescens Chitinase A, E315l, Comp 2e-15
1kfw_A435 Structure Of Catalytic Domain Of Psychrophilic Chit 2e-15
1eib_A540 Crystal Structure Of Chitinase A Mutant D313a Compl 2e-15
1k9t_A540 Chitinase A Complexed With Tetra-N-Acetylchitotrios 2e-15
3qok_A420 Crystal Structure Of Putative Chitinase Ii From Kle 6e-15
3ars_A584 Crystal Structure Analysis Of Chitinase A From Vibr 2e-14
3b8s_A584 Crystal Structure Of Wild-Type Chitinase A From Vib 3e-14
3b9a_A584 Crystal Structure Of Vibrio Harveyi Chitinase A Com 2e-13
1jnd_A420 Crystal Structure Of Imaginal Disc Growth Factor-2 3e-11
4dws_D546 Crystal Structure Of A Chitinase From The Yersinia 8e-09
4dws_C546 Crystal Structure Of A Chitinase From The Yersinia 6e-08
4dws_A546 Crystal Structure Of A Chitinase From The Yersinia 2e-07
4dws_B546 Crystal Structure Of A Chitinase From The Yersinia 2e-07
>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana Tobaccum Length = 353 Back     alignment and structure 
Iteration: 1

 Score =  253 bits (646), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 129/349 (36%), Positives = 209/349 (59%), Gaps = 10/349 (2%)
Query: 141 FRGIKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLR 200
            + +K  YW   +    ++ID++ FTH++ AF    P+  +L ++  +     +   T++
Sbjct: 1   MQNVKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQ 60
Query: 201 VQNSHIKXXXXXXXXXXDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPAN 260
            +N  +K          +   +  MA    +R  FI+S+I +AR+ GF G+DLDWE+P +
Sbjct: 61  RKNPSVKTFLSIAGGRANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLS 120
Query: 261 DQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYM 320
             DM+NL  L  +WRT+IN EAR +  + LLLTAAV  + R         YP+E++ + +
Sbjct: 121 AADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNSPRVN----GLNYPVESLARNL 176
Query: 321 NWVSPMCFDYHG-SWE-NFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYG 378
           +W++ M +D++G +W  + T  HA L DP +++S S GI +WIQAGVP +KLV+G+P YG
Sbjct: 177 DWINLMAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVLGIPFYG 236
Query: 379 RTWKLKDPDVNGIGAPALG---VGP-GDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFA 434
             W+L + +++G+ APA G   VG   DG +TYN+I  + +E  A  V++AT V  + ++
Sbjct: 237 YAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESRATTVYNATIVGDYCYS 296
Query: 435 GDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLSKQASIAW 483
           G +WI YDD  +++ KV + K +GL GYF W +  D++W LS+ AS  W
Sbjct: 297 GSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTASQTW 345
>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 Length = 353 Back     alignment and structure
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana Length = 356 Back     alignment and structure
>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain Length = 395 Back     alignment and structure
>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex With Bisdionin C Length = 381 Back     alignment and structure
>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose Length = 365 Back     alignment and structure
>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With Glucoallosamidin B Length = 365 Back     alignment and structure
>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitor Argadin Against Human Chitinase Length = 445 Back     alignment and structure
>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin Length = 364 Back     alignment and structure
>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase Length = 366 Back     alignment and structure
>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1 Suggests A Saccharide Binding Site Length = 377 Back     alignment and structure
>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40 In The Presense Of N,n',n''-triacetyl-chitotriose At 2.6a Resolution Length = 361 Back     alignment and structure
>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From Porcine (spp-40) At 2.89a Resolution Length = 361 Back     alignment and structure
>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40) Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a Resolution Length = 361 Back     alignment and structure
>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein (Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a Resolution Reveals Specific Binding Characteristics Of Sps-40 Length = 361 Back     alignment and structure
>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary Gland Protein (Mgp-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40) At 3.0a Resolution Using Crystal Grown In The Presence Of Polysaccharides Length = 361 Back     alignment and structure
>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin Tetramer Length = 362 Back     alignment and structure
>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained Chitooligosaccharide Binding Properties Length = 365 Back     alignment and structure
>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein (Spb-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling Protein From Bovine (Spc-40) At 2.1 A Resolution Length = 361 Back     alignment and structure
>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40) Secreted During Involution Length = 361 Back     alignment and structure
>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The Nematophagous Fungus Clonostachys Rosea Length = 406 Back     alignment and structure
>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 Length = 419 Back     alignment and structure
>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution Length = 392 Back     alignment and structure
>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1 Length = 392 Back     alignment and structure
>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1 Length = 392 Back     alignment and structure
>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human And Bacterial Chitinasefra Length = 433 Back     alignment and structure
>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus Fumigatus Yj- 407 Length = 395 Back     alignment and structure
>pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed With Hexa-n- Acetylchitohexaose (nag)6 Length = 540 Back     alignment and structure
>pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant W167a Length = 563 Back     alignment and structure
>pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline. Length = 548 Back     alignment and structure
>pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex With Chitotrio-Thiazoline Dithioamide Length = 540 Back     alignment and structure
>pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens Length = 499 Back     alignment and structure
>pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex With Catalytic Intermediate Length = 498 Back     alignment and structure
>pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3 Angstroms Resolution Length = 540 Back     alignment and structure
>pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At 1.55 Angstroms Length = 540 Back     alignment and structure
>pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q In Complex With N-Acetylglucosamine-Pentamer Length = 499 Back     alignment and structure
>pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product Cyclopentapeptide Argadin From Clonostachys Length = 499 Back     alignment and structure
>pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed Inhibitor Hm508, And Its Degradation Product, Chitobiono-Delta-Lactone Length = 499 Back     alignment and structure
>pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n Length = 499 Back     alignment and structure
>pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From Serratia Marcescens At 1.45 A Resolution Length = 499 Back     alignment and structure
>pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 Back     alignment and structure
>pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex With Hexasaccharide Length = 540 Back     alignment and structure
>pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B From Arthrobacter Tad20 Length = 435 Back     alignment and structure
>pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed With Octa-N- Acetylchitooctaose (Nag)8 Length = 540 Back     alignment and structure
>pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose Length = 540 Back     alignment and structure
>pdb|3QOK|A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae Length = 420 Back     alignment and structure
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio Harveyi With Novel Inhibitors - Apo Structure Of Mutant W275g Length = 584 Back     alignment and structure
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio Harveyi Length = 584 Back     alignment and structure
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed With Hexasaccharide Length = 584 Back     alignment and structure
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2 Length = 420 Back     alignment and structure
>pdb|4DWS|D Chain D, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 Back     alignment and structure
>pdb|4DWS|C Chain C, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 Back     alignment and structure
>pdb|4DWS|A Chain A, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 Back     alignment and structure
>pdb|4DWS|B Chain B, Crystal Structure Of A Chitinase From The Yersinia Entomophaga Toxin Complex Length = 546 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 1e-137
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 1e-133
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 1e-114
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 1e-113
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 1e-113
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 1e-112
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 1e-110
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 2e-94
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 3e-94
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 3e-93
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 2e-85
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 7e-84
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 5e-81
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 8e-81
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 6e-80
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 6e-80
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 9e-79
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 1e-76
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 6e-70
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 6e-64
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 7e-54
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 1e-50
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 2e-34
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 1e-27
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 3e-27
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 4e-24
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 1e-22
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 1e-21
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 4e-21
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 1e-14
2dsk_A311 Chitinase; catalytic domain, active domain, crysta 8e-13
1ta3_A274 XIP-1, xylanase inhibitor protein I; beta alpha ba 4e-07
1cnv_A299 Concanavalin B; plant chitinase, chitin binding pr 2e-06
3mu7_A273 XAIP-II, xylanase and alpha-amylase inhibitor prot 3e-06
2uy2_A294 Endochitinase; carbohydrate metabolism, polysaccha 5e-06
2hvm_A273 Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He 7e-05
3h0g_A1752 DNA-directed RNA polymerase II subunit RPB1; trans 3e-04
3h0g_A1752 DNA-directed RNA polymerase II subunit RPB1; trans 4e-04
2gsj_A271 Protein PPL-2; mimosoideae, chimerolectin, endochi 4e-04
1twf_A1733 B220, DNA-directed RNA polymerase II largest subun 5e-04
3v1v_A433 2-MIB synthase, 2-methylisoborneol synthase; class 8e-04
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Length = 353 Back     alignment and structure
 Score =  399 bits (1027), Expect = e-137
 Identities = 132/348 (37%), Positives = 211/348 (60%), Gaps = 10/348 (2%)

Query: 142 RGIKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRV 201
           + +K  YW   +    ++ID++ FTH++ AF    P+  +L ++  +     +   T++ 
Sbjct: 2   QNVKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQR 61

Query: 202 QNSHIKILLSIGGGGSDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPAND 261
           +N  +K  LSI GG ++   +  MA    +R  FI+S+I +AR+ GF G+DLDWE+P + 
Sbjct: 62  KNPSVKTFLSIAGGRANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSA 121

Query: 262 QDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTIYGGPRGYPIEAINKYMN 321
            DM+NL  L  +WRT+IN EAR +  + LLLTAAV   S          YP+E++ + ++
Sbjct: 122 ADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVS-NSPRVNG---LNYPVESLARNLD 177

Query: 322 WVSPMCFDYHGSW--ENFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGR 379
           W++ M +D++G     + T  HA L DP +++S S GI +WIQAGVP +KLV+G+P YG 
Sbjct: 178 WINLMAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVLGIPFYGY 237

Query: 380 TWKLKDPDVNGIGAPALGVG-PG---DGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAG 435
            W+L + +++G+ APA G    G   DG +TYN+I  + +E  A  V++AT V  + ++G
Sbjct: 238 AWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESRATTVYNATIVGDYCYSG 297

Query: 436 DSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQDKDWTLSKQASIAW 483
            +WI YDD  +++ KV + K +GL GYF W +  D++W LS+ AS  W
Sbjct: 298 SNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTASQTW 345
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Length = 356 Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Length = 377 Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Length = 365 Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Length = 395 Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Length = 361 Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Length = 392 Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Length = 433 Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Length = 406 Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Length = 419 Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Length = 420 Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Length = 312 Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Length = 499 Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Length = 420 Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Length = 540 Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Length = 435 Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Length = 574 Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Length = 584 Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Length = 319 Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Length = 275 Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Length = 393 Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Length = 333 Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Length = 290 Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Length = 271 Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Length = 290 Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Length = 302 Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Length = 289 Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Length = 321 Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Length = 451 Back     alignment and structure
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Length = 311 Back     alignment and structure
>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A* Length = 274 Back     alignment and structure
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 Length = 299 Back     alignment and structure
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* Length = 273 Back     alignment and structure
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* Length = 294 Back     alignment and structure
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* Length = 273 Back     alignment and structure
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 Back     alignment and structure
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 Back     alignment and structure
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} Length = 271 Back     alignment and structure
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 Back     alignment and structure
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query484
3alf_A353 Chitinase, class V; hydrolase; 1.20A {Nicotiana ta 100.0
3aqu_A356 AT4G19810; stress response, TIM barrel, hydrolase, 100.0
3fy1_A395 Amcase, TSA1902, acidic mammalian chitinase; struc 100.0
4ay1_A365 Chitinase-3-like protein 2; chilectin, lectin, chi 100.0
1vf8_A377 YM1, secretory protein; chitinase, CHI-lectin, str 100.0
1wb0_A445 Chitinase 1, chitotriosidase 1; cyclopentapeptide 100.0
2pi6_A361 Chitinase-3-like protein 1; complex, signaling pro 100.0
1itx_A419 Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) 100.0
3g6m_A406 Chitinase, crchi1; inhibitor, caffeine, glycosidas 100.0
1kfw_A435 Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrob 100.0
1ll7_A392 Chitinase 1; beta-alpha barrel, hydrolase; 2.00A { 100.0
1goi_A499 Chitinase B; chitin degradation, hydrolase, glycos 100.0
1edq_A540 Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1 100.0
1w9p_A433 Chitinase; peptide inhibitors, argifin, argadin, g 100.0
3qok_A420 Putative chitinase II; structural genomics, PSI-bi 100.0
3arx_A584 Chitinase A; TIM barrel, inhibitor complex, glycos 100.0
1jnd_A420 Imaginal DISC growth factor-2; IDGF, chitinase, in 100.0
3oa5_A574 CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yers 100.0
3cz8_A319 Putative sporulation-specific glycosylase YDHD; st 100.0
3bxw_B393 Chitinase domain-containing protein 1; TIM barrel, 100.0
3fnd_A312 Chitinase; TIM-barrel, structural genomics, PSI-2, 100.0
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 100.0
1nar_A290 Narbonin; plant SEED protein; 1.80A {Vicia narbone 100.0
2y8v_A290 CHIC, class III chitinase, putative; afchic, hydro 100.0
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 100.0
3ebv_A302 Chinitase A; chitinase A, CHIA, glycosidase, struc 100.0
3sim_A275 Protein, family 18 chitinase; family 18 plant chit 100.0
3ian_A321 Chitinase; structural genomics, hydrolase, glycosi 100.0
4ac1_X283 Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, g 100.0
2uy2_A294 Endochitinase; carbohydrate metabolism, polysaccha 99.97
2gsj_A271 Protein PPL-2; mimosoideae, chimerolectin, endochi 99.97
2hvm_A273 Hevamine; hydrolase, chitinase/lysozyme; 1.80A {He 99.97
1edt_A271 Endo-beta-N-acetylglucosaminidase H, endo H; hydro 99.97
2xtk_A310 CHIA1, class III chitinase CHIA1; hydrolase, GH18; 99.96
1cnv_A299 Concanavalin B; plant chitinase, chitin binding pr 99.96
1eok_A290 Endo-beta-N-acetylglucosaminidase F3; alpha/beta-b 99.96
2ebn_A289 Endo-beta-N-acetylglucosaminidase F1; hydrolase(gl 99.94
1ta3_A274 XIP-1, xylanase inhibitor protein I; beta alpha ba 99.94
3mu7_A273 XAIP-II, xylanase and alpha-amylase inhibitor prot 99.9
2dsk_A311 Chitinase; catalytic domain, active domain, crysta 99.86
3poh_A451 Endo-beta-N-acetylglucosaminidase F1; TIM barrel, 99.85
2vtf_A 626 Endo-beta-N-acetylglucosaminidase; hydrolase, fami 97.99
2w91_A 653 Endo-beta-N-acetylglucosaminidase D; hydrolase, N- 97.79
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 95.53
2aam_A309 Hypothetical protein TM1410; structural genomics, 93.85
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 93.44
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 92.76
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 92.23
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 91.87
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 91.74
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 90.72
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 90.49
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 90.01
2e8y_A718 AMYX protein, pullulanase; multiple domain, beta-a 89.94
2wan_A921 Pullulanase; hydrolase, glycoside hydrolase, polys 89.47
1wza_A488 Alpha-amylase A; hydrolase, halophilic, thermophil 89.18
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 88.43
3vmn_A 643 Dextranase; TIM barrel, immunoglobrin fold, greek- 88.39
3m07_A 618 Putative alpha amylase; IDP00968, csgid, structura 87.63
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 87.51
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 87.05
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 86.95
3k30_A 690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 86.78
2ya0_A 714 Putative alkaline amylopullulanase; hydrolase, gly 85.83
2zic_A 543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 85.49
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 85.34
3aml_A 755 OS06G0726400 protein; starch-branching, transferas 85.09
3hgj_A349 Chromate reductase; TIM barrel, oxidoreductase; HE 84.99
3kru_A343 NADH:flavin oxidoreductase/NADH oxidase; homotetra 84.1
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 83.26
1gcy_A 527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 82.9
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 82.86
2wnw_A447 Activated by transcription factor SSRB; hydrolase, 82.73
1z41_A338 YQJM, probable NADH-dependent flavin oxidoreductas 82.42
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 82.4
1o94_A 729 Tmadh, trimethylamine dehydrogenase; electron tran 82.3
3gr7_A340 NADPH dehydrogenase; flavin, FMN, beta-alpha-barre 82.07
2ya1_A 1014 Putative alkaline amylopullulanase; hydrolase, gly 81.85
1zja_A 557 Trehalulose synthase; sucrose isomerase, alpha-amy 81.65
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 80.88
1m53_A 570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 80.81
1uok_A 558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 80.52
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A* Back     alignment and structure
Probab=100.00  E-value=7.6e-72  Score=571.14  Aligned_cols=339  Identities=39%  Similarity=0.791  Sum_probs=312.6

Q ss_pred             CeEEEEEecCCCCCCCCCCCCCCccEEEEeeeeeeCCCCEEEEcCcChHHHHHHHHHHHhhCCCcEEEEEECCCCCCchh
Q 011487          142 RGIKAAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKILLSIGGGGSDPNV  221 (484)
Q Consensus       142 ~~i~~gY~~~~~~~~~~~i~~~~~ThIi~af~~i~~~gg~l~~~~~~~~~~~~~i~~lk~~n~~~KvllSIGG~~~~~~~  221 (484)
                      +++++|||-+...+.+++|+.++||||+|+|+.++++++++.+.+.++..+.++++.+|+++|++|||+|||||+.++..
T Consensus         2 ~~~~~gY~~~~~~~~~~~i~~~~~THi~yaF~~i~~~~~~v~~~~~~~~~~~~~~~~lk~~~~~lkvllsiGG~~~~~~~   81 (353)
T 3alf_A            2 QNVKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKNPSVKTFLSIAGGRANSTA   81 (353)
T ss_dssp             CCEEEEEEEGGGCCCGGGCCGGGCSEEEEEEEEEETTTTEEECCHHHHHHHHHHHHHHHHHCTTCEEEEEEECTTSCHHH
T ss_pred             CceEEEEEecCCCCCHhHCCcccCCEEEEEEEEeeCCCCEEEeCCccHHHHHHHHHHHHhhCCCCeEEEEECCCCCCchh
Confidence            35789999666679999999999999999999999987788877655677888988899999999999999999866889


Q ss_pred             hhhhcCCHHHHHHHHHHHHHHHHHhCCCeeEEeecCCCChhhHHHHHHHHHHHHHHhHHhhhhcCCCCeEEEEEeccccc
Q 011487          222 FSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASR  301 (484)
Q Consensus       222 f~~l~~~~~~r~~fi~si~~~l~~ygfDGIDIDwE~p~~~~~~~~~~~flk~Lr~~l~~~~~~~~~~~~~Lsvav~~~~~  301 (484)
                      |+.++++++.|++||+++++++++|||||||||||+|..++++++|..||++||++|+++++.+++++++||+++++.+.
T Consensus        82 f~~~~~~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~~~~~~~~~~~Ls~a~~~~~~  161 (353)
T 3alf_A           82 YGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNSPR  161 (353)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHTCSEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEEESSSE
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHcCCCeEEEEeeecCChhHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEecccCch
Confidence            99999999999999999999999999999999999998788999999999999999999888888888999999997554


Q ss_pred             ccccCCCCCcChhhhhccCceEEeeeccCCCC-CC-CCCCCCCccCCCCCCccHHHHHHHHHHcCCCCCCEeecCcccee
Q 011487          302 FTIYGGPRGYPIEAINKYMNWVSPMCFDYHGS-WE-NFTGLHAALNDPRSNISTSYGIGSWIQAGVPAQKLVMGLPLYGR  379 (484)
Q Consensus       302 ~~~~~~~~~~d~~~l~~~vD~v~lm~YD~~g~-w~-~~~g~~spl~~~~~~~~~~~~v~~~~~~Gvp~~KlvLGlp~YG~  379 (484)
                      .    ....|++++|.+++||||||+||+||. |+ ..+|+++|||++....+++.+|+.|++.|+|++||+||||||||
T Consensus       162 ~----~~~~~d~~~l~~~vD~invMtYD~~g~~w~~~~~g~~a~l~~~~~~~~~~~~v~~~~~~gvp~~KlvlGip~YGr  237 (353)
T 3alf_A          162 V----NGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVLGIPFYGY  237 (353)
T ss_dssp             E----TTEECCHHHHHHHCSEEEEECCCSSCTTTSTTBCCCSSCSCCTTTCCSHHHHHHHHHHTTCCGGGEEEEEESEEE
T ss_pred             h----hhcCCCHHHHhhhccEEEEEEeeccCCCCCCCCCCCCCcCcCCCCCccHHHHHHHHHHcCCChHHEEEEeCCcee
Confidence            4    346799999999999999999999999 99 89999999998777789999999999999999999999999999


Q ss_pred             eeeecCCCCCCCCCCcCCC---CCC-CcccchHHHHHHhhcCCceEEEcCCCceeEEEeCCEEEEECCHHHHHHHHHHHH
Q 011487          380 TWKLKDPDVNGIGAPALGV---GPG-DGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLSIKLKVQFAK  455 (484)
Q Consensus       380 ~~~~~~~~~~~~~~~~~g~---~~~-~g~~~y~ei~~~l~~~g~~~~~D~~s~~~y~y~~~~~isydd~~Sl~~K~~~ak  455 (484)
                      .|++.+..++++++++.|.   +.. .|.++|.|||+++.++++...||++++++|.|++++||+|||++|+++|++||+
T Consensus       238 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~y~ei~~~~~~~g~~~~~D~~~~~~y~y~~~~~v~ydd~~Si~~K~~~~~  317 (353)
T 3alf_A          238 AWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESRATTVYNATIVGDYCYSGSNWISYDDTQTVRNKVNYVK  317 (353)
T ss_dssp             EEEESCTTCCSTTCBEEEECTTSCTTTCEEEHHHHHHHHHHHTCEEEEETTTTEEEEEETTEEEEECCHHHHHHHHHHHH
T ss_pred             eeeccCCcCCCCCCCCCCCCCCCCCCCCeEcHHHHHHHHhhCCCeEEEccccceEEEEeCCEEEEcCCHHHHHHHHHHHH
Confidence            9999998889999988766   333 689999999999988899999999999999999999999999999999999999


Q ss_pred             HCCCcEEEEEecCCCCcchHHHHHHHhcC
Q 011487          456 SKGLGGYFFWAIGQDKDWTLSKQASIAWR  484 (484)
Q Consensus       456 ~~gLgGv~iW~l~~DD~~~ll~a~~~~~~  484 (484)
                      ++||||+|+|+|++||+|.|++|++++|+
T Consensus       318 ~~gLgGv~~W~l~~Dd~~~ll~a~~~~l~  346 (353)
T 3alf_A          318 GRGLLGYFAWHVAGDQNWGLSRTASQTWG  346 (353)
T ss_dssp             HTTCSEEEEECGGGSSTTHHHHHHHHHHC
T ss_pred             hCCCCEEEEEeccCCCCchHHHHHHHHhC
Confidence            99999999999999999999999999885
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A* Back     alignment and structure
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide, pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens} Back     alignment and structure
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A Back     alignment and structure
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Back     alignment and structure
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ... Back     alignment and structure
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A* Back     alignment and structure
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP: c.1.8.5 d.26.3.1 Back     alignment and structure
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A Back     alignment and structure
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A* Back     alignment and structure
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A* Back     alignment and structure
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A* Back     alignment and structure
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* Back     alignment and structure
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A* Back     alignment and structure
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A Back     alignment and structure
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp} Back     alignment and structure
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens} Back     alignment and structure
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5 Back     alignment and structure
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus} Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor} Back     alignment and structure
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel, chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus vernus} Back     alignment and structure
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp} Back     alignment and structure
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina} Back     alignment and structure
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation, glycopr chitin-binding, chitin degradation, CAZY, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A* 2uy4_A* 2uy5_A* Back     alignment and structure
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, X-RAY; 1.73A {Parkia platycephala} Back     alignment and structure
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis} SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A* 1kqz_A* Back     alignment and structure
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A Back     alignment and structure
>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A {Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A* Back     alignment and structure
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5 Back     alignment and structure
>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase; 1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB: 1eom_A* Back     alignment and structure
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 Back     alignment and structure
>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB: 1om0_A* 1te1_A* Back     alignment and structure
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell, amylase/xylanase inhibitory protein, hydrolase I; 1.29A {Scadoxus multiflorus} SCOP: c.1.8.0 PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A* 3d5h_A* Back     alignment and structure
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A Back     alignment and structure
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A* Back     alignment and structure
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A* Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Back     alignment and structure
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A* Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Back     alignment and structure
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A* Back     alignment and structure
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A* Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} Back     alignment and structure
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A* Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A* Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 484
d1goia2356 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic 1e-49
d1vf8a1302 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin 1e-46
d1wb0a1297 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Huma 2e-46
d1w9pa1333 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil 9e-44
d1w9pa1333 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergil 0.001
d1edqa2358 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt 4e-43
d1edqa2358 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalyt 7e-05
d1itxa1347 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillu 6e-41
d2pi6a1292 c.1.8.5 (A:1-239,A:308-361) Signal processing prot 6e-41
d2pi6a1292 c.1.8.5 (A:1-239,A:308-361) Signal processing prot 6e-09
d1ll7a1330 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus ( 2e-39
d1jnda1327 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth f 3e-38
d1nara_289 c.1.8.5 (A:) Seed storage protein {Vicia narbonens 1e-36
d1kfwa1374 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitina 3e-31
d1edta_265 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {St 4e-25
d2ebna_285 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl 1e-24
d2hvma_273 c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para 4e-19
d1ta3a_274 c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I { 5e-18
d1eoka_282 c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Fl 3e-17
d1cnva_283 c.1.8.5 (A:) Seed storage protein {Jack bean (Cana 1e-12
d1vf8a270 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mo 6e-12
d1wb0a268 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo 1e-10
d2pi6a268 d.26.3.1 (A:240-307) Signal processing protein (SP 4e-10
d1itxa272 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circul 1e-08
d1edqa373 d.26.3.1 (A:444-516) Chitinase A {Serratia marcesc 2e-08
d1kfwa261 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Ar 9e-06
d1w9pa262 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumi 3e-04
d1ll7a262 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidio 7e-04
d1jnda292 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 0.003
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 356 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitinase B, catalytic domain
species: Serratia marcescens [TaxId: 615]

 Score =  171 bits (434), Expect = 1e-49
 Identities = 75/348 (21%), Positives = 123/348 (35%), Gaps = 50/348 (14%)

Query: 137 VPRRFRGIKAAYWPSFNDFPASSIDT---SYFTHIYYAFLLPEPK---TFKLNVTLLDHA 190
           +P            S   FP S+I        THI ++FL         +          
Sbjct: 11  IPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKAR 70

Query: 191 KLLELVGTLRVQNSHIKILLSIGG------GGSDPNVFSKMASTKETRAIFINSTIEIAR 244
            ++  +  L+  N  ++I+ SIGG       G     +     T  +RA F  S + I +
Sbjct: 71  DVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMK 130

Query: 245 KYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAVYFASRFTI 304
            YGFDGV++DWE+P   + +       ++ RT +NQ+        L     +  A     
Sbjct: 131 DYGFDGVNIDWEYPQAAE-VDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFF 189

Query: 305 YGGPRGYPIEAINKYMNWVSPMCFDYHGSWENFTGLHAALNDPRSNISTSYGIGSWIQAG 364
                   +  I   +++++ M +D  G WE  T   AAL               +  A 
Sbjct: 190 LSR-YYSKLAQIVAPLDYINLMTYDLAGPWEKVTNHQAAL---------------FGDAA 233

Query: 365 VPAQKLVMGLPLYGRTWKLKDPDVNGIGAPALGVGPGDGVLTYNQIVKFNMEGTAAVVFD 424
            P     +     G +W+                 P    LT +  V+        ++ +
Sbjct: 234 GPTFYNALREANLGWSWEELTRAF-----------PSPFSLTVDAAVQ------QHLMME 276

Query: 425 ATPVAYHSFAGDSWIGYDDVLSIKLKVQFAKSKGLGGYFFWAIGQDKD 472
             P A         + +DD  S K K ++ K + LGG  FW +GQD  
Sbjct: 277 GVPSAK----IVMGVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDNR 320
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 302 Back     information, alignment and structure
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333 Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 333 Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Length = 358 Back     information, alignment and structure
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 347 Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 292 Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 330 Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 327 Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Length = 289 Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 374 Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Length = 265 Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Length = 285 Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 273 Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 274 Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Length = 282 Back     information, alignment and structure
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Length = 283 Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 70 Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Length = 68 Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Length = 68 Back     information, alignment and structure
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Length = 72 Back     information, alignment and structure
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Length = 73 Back     information, alignment and structure
>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Length = 61 Back     information, alignment and structure
>d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Length = 62 Back     information, alignment and structure
>d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Length = 62 Back     information, alignment and structure
>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 92 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query484
d1wb0a1297 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 100.0
d1itxa1347 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 100.0
d2pi6a1292 Signal processing protein (SPC-40, MGP-40) {Sheep 100.0
d1w9pa1333 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 100.0
d1kfwa1374 Psychrophilic chitinase B {Arthrobacter sp., tad20 100.0
d1edqa2358 Chitinase A, catalytic domain {Serratia marcescens 100.0
d1vf8a1302 Chitinase-like lectin ym1, saccharide binding doma 100.0
d1ll7a1330 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 100.0
d1jnda1327 Imaginal disc growth factor-2 {Fruit fly (Drosophi 100.0
d1goia2356 Chitinase B, catalytic domain {Serratia marcescens 100.0
d1nara_289 Seed storage protein {Vicia narbonensis, Narbonin 99.98
d2hvma_273 Hevamine A (chitinase/lysozyme) {Para rubber tree 99.97
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 99.95
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.95
d1cnva_283 Seed storage protein {Jack bean (Canavalia ensifor 99.95
d1ta3a_274 Xylanase inhibitor protein I, XIP-I {Wheat (Tritic 99.95
d1eoka_282 Endo-beta-N-acetylglucosaminidase {Flavobacterium 99.84
d1vf8a270 Chitinase-like lectin ym1 {Mouse (Mus musculus) [T 99.19
d1wb0a268 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 99.0
d2pi6a268 Signal processing protein (SPC-40, MGP-40) {Sheep 98.92
d1itxa272 Chitinase A1 {Bacillus circulans [TaxId: 1397]} 98.78
d1edqa373 Chitinase A {Serratia marcescens [TaxId: 615]} 98.63
d1kfwa261 Psychrophilic chitinase B {Arthrobacter sp., tad20 98.59
d1jnda292 Imaginal disc growth factor-2 {Fruit fly (Drosophi 98.32
d1ll7a262 Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 97.83
d1w9pa262 Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} 97.83
d1goia388 Chitinase B {Serratia marcescens [TaxId: 615]} 97.74
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 94.5
d2aama1285 Hypothetical protein TM1410 {Thermotoga maritima [ 94.46
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 92.76
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 92.42
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 92.12
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 90.59
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 90.45
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 89.55
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 89.47
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 86.88
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 86.81
d2nt0a2354 Glucosylceramidase, catalytic domain {Human (Homo 86.44
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 86.07
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 85.67
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 85.43
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 85.4
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 84.73
d1nofa2277 Glycosyl hydrolase family 5 xylanase, catalytic do 82.92
d1m53a2 478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 82.85
d1ps9a1330 2,4-dienoyl-CoA reductase, N-terminal domain {Esch 82.84
d1djqa1340 Trimethylamine dehydrogenase, N-terminal domain {M 82.77
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 82.08
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 82.05
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 81.7
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Type II chitinase
domain: Chitotriosidase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-55  Score=432.56  Aligned_cols=270  Identities=34%  Similarity=0.611  Sum_probs=237.4

Q ss_pred             EEEEEecCCC-------CCCCCCCCCCCccEEEEeeeeeeCCCCEEEEcCcChHHHHHHHHHHHhhCCCcEEEEEECCCC
Q 011487          144 IKAAYWPSFN-------DFPASSIDTSYFTHIYYAFLLPEPKTFKLNVTLLDHAKLLELVGTLRVQNSHIKILLSIGGGG  216 (484)
Q Consensus       144 i~~gY~~~~~-------~~~~~~i~~~~~ThIi~af~~i~~~gg~l~~~~~~~~~~~~~i~~lk~~n~~~KvllSIGG~~  216 (484)
                      +++|||++|.       .+.+++|+.++||||+|+|+.++.+  .......++..+.+.+..+|+++|++|||||||||+
T Consensus         2 kvvcYy~~w~~~~~~~~~~~~~~i~~~~~THi~yaf~~~~~~--~~~~~~~~~~~~~~~~~~lk~~~p~lKvllSiGG~~   79 (297)
T d1wb0a1           2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNH--QLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGGWN   79 (297)
T ss_dssp             EEEEEEETTGGGSCGGGCCCGGGCCTTTCSEEEEEEEEEETT--EEECSSTTHHHHHHHHHHGGGTCTTCEEEEEEECTT
T ss_pred             eEEEEECcCcccCCCCCCCChhHCCcccCCEEEEEEEEccCC--ccccCCcccHHHHHHHHHHHHhCCCCeEEEEEeccc
Confidence            5799998652       4778999999999999999999854  354455555555444578999999999999999998


Q ss_pred             CCchhhhhhcCCHHHHHHHHHHHHHHHHHhCCCeeEEeecCCCC----hhhHHHHHHHHHHHHHHhHHhhhhcCCCCeEE
Q 011487          217 SDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPAN----DQDMSNLALLFKQWRTSINQEARITNTSPLLL  292 (484)
Q Consensus       217 ~~~~~f~~l~~~~~~r~~fi~si~~~l~~ygfDGIDIDwE~p~~----~~~~~~~~~flk~Lr~~l~~~~~~~~~~~~~L  292 (484)
                      .++..|+.++++++.|++||++|+++|++|||||||||||+|..    ..++.+|..|+++||++|+++++..+++.+.+
T Consensus        80 ~~~~~fs~~~~~~~~R~~Fi~siv~~l~~y~fDGiDiDWE~p~~~~~~~~d~~n~~~l~~~Lr~~l~~~~~~~~~~~~~~  159 (297)
T d1wb0a1          80 FGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLL  159 (297)
T ss_dssp             TCSHHHHHHHTSHHHHHHHHHHHHHHHHHTTCCEEEEECSCTTSTTCCTTHHHHHHHHHHHHHHHHHHHHHHHCSCCCEE
T ss_pred             cccchHHHHhhhhHHHHHHHHHHHHHHHHcCCCceeEEEEeccccCCChHHHHHHHHHHHHHHHHHhhhhhhcCCCceeE
Confidence            77889999999999999999999999999999999999999964    46899999999999999999988888888999


Q ss_pred             EEEecccccccccCCCCCcChhhhhccCceEEeeeccCCCCCCCCCCCCCccCCCCC------CccHHHHHHHHHHcCCC
Q 011487          293 TAAVYFASRFTIYGGPRGYPIEAINKYMNWVSPMCFDYHGSWENFTGLHAALNDPRS------NISTSYGIGSWIQAGVP  366 (484)
Q Consensus       293 svav~~~~~~~~~~~~~~~d~~~l~~~vD~v~lm~YD~~g~w~~~~g~~spl~~~~~------~~~~~~~v~~~~~~Gvp  366 (484)
                      +++++.....    ....|++.++.+++||||||+||+||.|+..+|+++|+|....      ..+++.+|++|++.|+|
T Consensus       160 s~~~~~~~~~----~~~~~~~~~i~~~vD~invmtYD~~g~~~~~tg~~aply~~~~~~~~~~~~~~d~~v~~~~~~G~p  235 (297)
T d1wb0a1         160 SAAVPAGQTY----VDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTP  235 (297)
T ss_dssp             EEEECCCHHH----HHHHCCHHHHHHHCSEEEECCCCSSCTTSSBCCCSSCSSCCTTCCGGGGGCSHHHHHHHHHHTTCC
T ss_pred             EEEccCchhH----hhhccCHHHHHhhCCEEEEEecccCCCCCCCCCCCCcCCCCccccCCCCCCCHHHHHHHHHHcCCC
Confidence            9999876554    2457899999999999999999999999999999999996543      56899999999999999


Q ss_pred             CCCEeecCccceeeeeecCCCCCCCCCCcCCCCCCCcccchHHHHHHhhcCCceEEEcCCCceeEEEeCCEEEEECCHHH
Q 011487          367 AQKLVMGLPLYGRTWKLKDPDVNGIGAPALGVGPGDGVLTYNQIVKFNMEGTAAVVFDATPVAYHSFAGDSWIGYDDVLS  446 (484)
Q Consensus       367 ~~KlvLGlp~YG~~~~~~~~~~~~~~~~~~g~~~~~g~~~y~ei~~~l~~~g~~~~~D~~s~~~y~y~~~~~isydd~~S  446 (484)
                      ++||+||||                                                                 |||++|
T Consensus       236 ~~KlvlGip-----------------------------------------------------------------yd~~~s  250 (297)
T d1wb0a1         236 ASKLILGMP-----------------------------------------------------------------TDDVES  250 (297)
T ss_dssp             GGGEEEEEE-----------------------------------------------------------------SCCHHH
T ss_pred             HHHeEEEec-----------------------------------------------------------------cCCHHH
Confidence            999999986                                                                 589999


Q ss_pred             HHHHHHHHHHCCCcEEEEEecCCCCcc---------hHHHHHHHhcC
Q 011487          447 IKLKVQFAKSKGLGGYFFWAIGQDKDW---------TLSKQASIAWR  484 (484)
Q Consensus       447 l~~K~~~ak~~gLgGv~iW~l~~DD~~---------~ll~a~~~~~~  484 (484)
                      ++.|++|++++||||+|+|+|++||..         .|++++++.++
T Consensus       251 i~~K~~~~~~~glgGv~~W~l~~DD~~G~~cg~~~~pLl~ai~~~l~  297 (297)
T d1wb0a1         251 FKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQELS  297 (297)
T ss_dssp             HHHHHHHHHHTTCCEEEEECGGGSCTTCSSSSSCSSHHHHHHHHHC-
T ss_pred             HHHHHHHHHhcCCceEEEEeCccccCCCCcCCCCCccHHHHHHHHhC
Confidence            999999999999999999999999733         39999999864
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1, saccharide binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis, Narbonin [TaxId: 3912]} Back     information, alignment and structure
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber tree (Hevea brasiliensis) [TaxId: 3981]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia ensiformis), Concanavalin B [TaxId: 3823]} Back     information, alignment and structure
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F3 [TaxId: 238]} Back     information, alignment and structure
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]} Back     information, alignment and structure
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} Back     information, alignment and structure
>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ll7a2 d.26.3.1 (A:293-354) Chitinase 1 {Fungus (Coccidioides immitis) [TaxId: 5501]} Back     information, alignment and structure
>d1w9pa2 d.26.3.1 (A:299-360) Chitinase 1 {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure