Citrus Sinensis ID: 011499

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480----
MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAVPGAAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSSKYSVSVFFFFYIKYFFIKNKFSFIRVLLRTYVKKERFLIFKNFIEIEVNYTLIKKA
cHHHHHHHccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccEEEEEEEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccEEccccccccccccccEEEEEEEEEEccccccEEEEEEEccccEEEEEEEEEEEcccccEEEEEcccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccEEEEEEEEEEEcc
cHHHHHHHccHHHEccccccccccHccccccccccccccccccEEccccccccccccEEEEEEcccccccEEEEEHHHcccccccccccccccccEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccccccEEcccccccccccccEEEEEEEEEccccccccEEEEEEccccEEEEEEEEEcccccccEEEEEEEEEcEHHHccccEEEEccccccHHHccHHHHHHHHHHHHHHHcccccccccccccccEEcEcccccHHHcHHHccccEcccccccccEEcccccEcccccccEccccccccEEcccccHcHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHcccHHHHHHHHccccccEEccccccEEEccccccccHHHHHHHHHHccccHEEEEEEccccccHHHHHHHHHHHHHHcccEEEcc
MALTREFMGAFSifersssssssskvLLNQSTFWQNKLLQQkqflvpvqqrrvhsrkagaagvrrginnpvaALSEDLVKGaassavpgaaekpvKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELvgtevdprtkgpkksREAVLKDWSKKSNVKAERVHYTAEflvdsnfgtpgaITVANKHQKEFFLETitiegfacgpvhfqcnswvqstkdhpgkriffanqpylpsetpaGLRALREKELKDirgtgkgvrklsdriydydvyndlgnpdrgsefvrpslggeqrpyprrcrtgrlptdtdllaesriekplpiyvprdeqfeesKQDAFSAGRLKGALHNLIPLLKASisarnhdfsgfsdidslysEGLLLnlglkdgllkklplpnvvSKIQESsqgllkynspkilsskySVSVFFFFYIKYFFIKNKFSFIRVLLRTYVKKERFLIFKNFIEIEVNYTLIKKA
MALTREFMGAFsifersssssssSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVhsrkagaagvrrginnPVAALSEDLVKGAASsavpgaaekpvkfkVRAVLTVRknikedfkETLVNQFdaltekigrnvvlelvgtevdprtkgpkksreavlkdwskksnvkaerVHYTAeflvdsnfgTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKElkdirgtgkgvrklsdriydydvyndlgnpdrgsefvrpslggeqrpyprrcrtgrlptdtdllaesriekplpiyvprdeQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSSKYSVSVFFFFYIKYFFIKNKFSFIRVLLRTYVKKERflifknfieievNYTLIKKA
MALTREFMGAFSIFERssssssssKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAVPGAAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEglllnlglkdgllkklplpnVVSKIQESSQGLLKYNSPKILsskysvsvffffyikyffiknkfsfiRVLLRTYVKKERFLIFKNFIEIEVNYTLIKKA
**************************LLNQSTFWQNKLLQQKQFLVPVQQRRV********GVRRGINNPVAAL******************KPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTE************************VKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYL******************IRGTGKGVRKLSDRIYDYDVYNDL***********************************************IY*****************GRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSSKYSVSVFFFFYIKYFFIKNKFSFIRVLLRTYVKKERFLIFKNFIEIEVNYTLI***
***T****GAFS***************************************************************************************RAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELV*****************VLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRP************************PLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSSKYSVSVFFFFYIKYFFIKNKFSFIRVLLRTYVKKERFLIFKNFIEIEVNYTLIKK*
MALTREFMGAFSIF************LLNQSTFWQNKLLQQKQFLVPV*************GVRRGINNPVAALSEDL***********AAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEV****************DWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSSKYSVSVFFFFYIKYFFIKNKFSFIRVLLRTYVKKERFLIFKNFIEIEVNYTLIKKA
*A**REFMGAFSIFERSSS********LNQS**********KQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAV*****KPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSSKYSVSVFFFFYIKYFFIKNKFSFIRVLLRTYVKKERFLIFKNFIEIEVNYTLIKK*
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVKGAASSAVPGAAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILSSKYSVSVFFFFYIKYFFIKNKFSFIRVLLRTYVKKERFLIFKNFIEIEVNYTLIKKA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query484 2.2.26 [Sep-21-2011]
Q9FNX8 926 Lipoxygenase 4, chloropla yes no 0.857 0.448 0.651 1e-155
O24371 914 Linoleate 13S-lipoxygenas N/A no 0.840 0.445 0.662 1e-151
Q9LNR3 919 Lipoxygenase 3, chloropla no no 0.838 0.441 0.640 1e-150
Q8H016 918 Probable lipoxygenase 6 O yes no 0.731 0.385 0.625 1e-131
Q7XV13 899 Putative lipoxygenase 5 O no no 0.762 0.410 0.538 1e-108
Q9CAG3 917 Lipoxygenase 6, choloropl no no 0.766 0.404 0.418 3e-67
O24370 899 Linoleate 13S-lipoxygenas N/A no 0.685 0.369 0.392 6e-62
P38416 859 Linoleate 9S-lipoxygenase N/A no 0.696 0.392 0.401 1e-59
P38415 860 Linoleate 9S-lipoxygenase N/A no 0.677 0.381 0.408 1e-57
Q43190 860 Probable linoleate 9S-lip N/A no 0.677 0.381 0.408 1e-57
>sp|Q9FNX8|LOX4_ARATH Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1 Back     alignment and function desciption
 Score =  549 bits (1414), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 286/439 (65%), Positives = 329/439 (74%), Gaps = 24/439 (5%)

Query: 1   MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLV-PVQQRRVHSRKAG 59
           MAL  E MG+  IFERSSS +S        S F   K  Q+ QF + P   R +  R   
Sbjct: 1   MALANEIMGSRLIFERSSSLASPF-----HSRFSIKKKTQRTQFSINPFDPRPM--RAVN 53

Query: 60  AAGVRRGINNPVAALSEDLVKGAASSAV------PGAAEKPVKFKVRAVLTVRKNIKEDF 113
           ++GV       VAA+SEDLVK    S V          EK VKFKVRAV TVR   KEDF
Sbjct: 54  SSGV-------VAAISEDLVKTLRISTVGRKQEKEEEEEKSVKFKVRAVATVRNKNKEDF 106

Query: 114 KETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYT 173
           KETLV   DA T+KIGRNVVLEL+ T+VDP+T  PKKS+ AVLKDWSKKSN KAERVHYT
Sbjct: 107 KETLVKHLDAFTDKIGRNVVLELMSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAERVHYT 166

Query: 174 AEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIF 233
           AEF VDS FG+PGAITV NKHQKEFFLE+ITIEGFACGPVHF CNSWVQS KDHP KRI 
Sbjct: 167 AEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRIL 226

Query: 234 FANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVR 293
           F NQPYLPSETP+GLR LREKEL+++RG GKG RKLSDRIYDYDVYND+GNPD   E  R
Sbjct: 227 FTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDVYNDIGNPDISRELAR 286

Query: 294 PSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKG 353
           P+LGG + PYPRRCRTGR  TDTD+++E R+EKPLP+YVPRDEQFEESKQ+ F+A RLK 
Sbjct: 287 PTLGGREFPYPRRCRTGRSSTDTDMMSERRVEKPLPMYVPRDEQFEESKQNTFAACRLKA 346

Query: 354 ALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQES 413
            LHNLIP LKASI A   DF+ F +IDSLY EGLLL LG +D + KK PLP +V+ +Q+S
Sbjct: 347 VLHNLIPSLKASILA--EDFANFGEIDSLYKEGLLLKLGFQDDMFKKFPLPKIVTTLQKS 404

Query: 414 SQGLLKYNSPKILS-SKYS 431
           S+GLL+Y++PKI+S  KY+
Sbjct: 405 SEGLLRYDTPKIVSKDKYA 423
Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity). 13S-lipoxygenase that can use linolenic acid as substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2
>sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LNR3|LOX3_ARATH Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1 Back     alignment and function description
>sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2 Back     alignment and function description
>sp|Q7XV13|LOX5_ORYSJ Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2 Back     alignment and function description
>sp|Q9CAG3|LOX6_ARATH Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1 Back     alignment and function description
>sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1 Back     alignment and function description
>sp|P38416|LOXB_SOLLC Linoleate 9S-lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1 Back     alignment and function description
>sp|P38415|LOXA_SOLLC Linoleate 9S-lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1 Back     alignment and function description
>sp|Q43190|LOX14_SOLTU Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum GN=LOX1.4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query484
14589309 922 lipoxygenase [Sesbania rostrata] 0.851 0.446 0.689 1e-161
224119582 896 predicted protein [Populus trichocarpa] 0.747 0.404 0.728 1e-160
187960377 913 lipoxygenase 2 [Olea europaea] 0.830 0.440 0.668 1e-159
449480516 907 PREDICTED: LOW QUALITY PROTEIN: linoleat 0.828 0.442 0.653 1e-158
449447902 907 PREDICTED: linoleate 13S-lipoxygenase 3- 0.828 0.442 0.653 1e-157
268636249 916 lipoxygenase [Vitis vinifera] 0.845 0.446 0.656 1e-155
407930085 909 lipoxygenase 2 [Capsicum annuum] 0.832 0.443 0.665 1e-155
356558934 922 PREDICTED: linoleate 13S-lipoxygenase 3- 0.840 0.441 0.658 1e-155
356519798 927 PREDICTED: linoleate 13S-lipoxygenase 3- 0.838 0.437 0.651 1e-154
224073648 925 predicted protein [Populus trichocarpa] 0.851 0.445 0.635 1e-154
>gi|14589309|emb|CAC43237.1| lipoxygenase [Sesbania rostrata] Back     alignment and taxonomy information
 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 297/431 (68%), Positives = 346/431 (80%), Gaps = 19/431 (4%)

Query: 1   MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGA 60
           MAL +E MG+ S+ ERS   SSSS+VL   S      LL    F VP++ R+V       
Sbjct: 1   MALAKEIMGS-SLVERSLFLSSSSRVLQRHS------LLISPVF-VPLENRKV------- 45

Query: 61  AGVRRGINNPVAALSEDLVKGAASSAVPGAA---EKPVKFKVRAVLTVRKNIKEDFKETL 117
             +R+    PVAA+SEDL+KG++SS+    +   EKPVKFKVRAV+TVR  IKEDFKET+
Sbjct: 46  VRLRKAAKFPVAAISEDLLKGSSSSSASSPSVPAEKPVKFKVRAVVTVRNKIKEDFKETI 105

Query: 118 VNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFL 177
           V   DALT++IGRNVVLELV TE+DP+TK  KKS EAVLKDWSKKSNVKAERV+YTAEF 
Sbjct: 106 VKHIDALTDRIGRNVVLELVSTEIDPKTKAAKKSNEAVLKDWSKKSNVKAERVNYTAEFT 165

Query: 178 VDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQ 237
           VDS+FG PGAITV N HQKEFFLE+ITIEGFA G VHF CNSWVQ+ KDHPGKRIFF+N+
Sbjct: 166 VDSSFGEPGAITVTNNHQKEFFLESITIEGFATGAVHFPCNSWVQARKDHPGKRIFFSNK 225

Query: 238 PYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLG 297
           PYLP++TPAGLR LREKEL+++RG GKGVR LSDRIYDYD YNDLGNPD+G E  RP+LG
Sbjct: 226 PYLPADTPAGLRLLREKELRNLRGDGKGVRNLSDRIYDYDTYNDLGNPDKGIELARPTLG 285

Query: 298 G-EQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALH 356
           G E  PYPRRCRTGR PTDTD+ AESR+EKPLP+YVPRDE+FEESKQ+ FS  RLK  LH
Sbjct: 286 GSETYPYPRRCRTGREPTDTDMYAESRVEKPLPMYVPRDERFEESKQNTFSVKRLKAVLH 345

Query: 357 NLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQG 416
           NLIP LKASISA N DF+ F+D+D LYSEGLL+  GL+D +L+KLPLP VVSKIQESSQG
Sbjct: 346 NLIPSLKASISANNQDFNDFTDVDGLYSEGLLIKFGLQDDVLRKLPLPKVVSKIQESSQG 405

Query: 417 LLKYNSPKILS 427
           LLKY++PKI+S
Sbjct: 406 LLKYDTPKIIS 416

Source: Sesbania rostrata

Species: Sesbania rostrata

Genus: Sesbania

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224119582|ref|XP_002331196.1| predicted protein [Populus trichocarpa] gi|222873317|gb|EEF10448.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|187960377|gb|ACD43484.1| lipoxygenase 2 [Olea europaea] Back     alignment and taxonomy information
>gi|449480516|ref|XP_004155917.1| PREDICTED: LOW QUALITY PROTEIN: linoleate 13S-lipoxygenase 3-1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449447902|ref|XP_004141705.1| PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|268636249|gb|ACZ17393.1| lipoxygenase [Vitis vinifera] Back     alignment and taxonomy information
>gi|407930085|gb|AFU51541.1| lipoxygenase 2 [Capsicum annuum] Back     alignment and taxonomy information
>gi|356558934|ref|XP_003547757.1| PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356519798|ref|XP_003528556.1| PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|224073648|ref|XP_002304125.1| predicted protein [Populus trichocarpa] gi|222841557|gb|EEE79104.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query484
TAIR|locus:2030215 926 LOX4 "lipoxygenase 4" [Arabido 0.847 0.442 0.616 2.8e-130
TAIR|locus:2018848 919 LOX3 "lipoxygenase 3" [Arabido 0.836 0.440 0.607 3.4e-125
TAIR|locus:2008808 917 LOX6 "lipoxygenase 6" [Arabido 0.774 0.408 0.410 2.9e-64
TAIR|locus:2087837 886 LOX5 [Arabidopsis thaliana (ta 0.690 0.376 0.361 2e-50
UNIPROTKB|P38419 924 CM-LOX1 "Lipoxygenase 7, chlor 0.615 0.322 0.403 2.3e-49
TAIR|locus:2011030 859 LOX1 "lipoxygenase 1" [Arabido 0.706 0.398 0.357 7.4e-49
UNIPROTKB|P29250 870 LOX1.1 "Linoleate 9S-lipoxygen 0.584 0.325 0.407 2.4e-45
TAIR|locus:2096915 896 LOX2 "lipoxygenase 2" [Arabido 0.644 0.348 0.317 4.8e-42
TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1278 (454.9 bits), Expect = 2.8e-130, P = 2.8e-130
 Identities = 267/433 (61%), Positives = 306/433 (70%)

Query:     1 MALTREFMGAFSIFERXXXXXXXXKVLLNQSTFWQNKLLQQKQFLV-PVQQRRVHSRKAG 59
             MAL  E MG+  IFER              S F   K  Q+ QF + P   R +  R   
Sbjct:     1 MALANEIMGSRLIFERSSSLASPF-----HSRFSIKKKTQRTQFSINPFDPRPM--RAVN 53

Query:    60 AAGVRRGINNPVAALSEDLVKGAASSAV------PGAAEKPVKFKVRAVLTVRKNIKEDF 113
             ++GV       VAA+SEDLVK    S V          EK VKFKVRAV TVR   KEDF
Sbjct:    54 SSGV-------VAAISEDLVKTLRISTVGRKQEKEEEEEKSVKFKVRAVATVRNKNKEDF 106

Query:   114 KETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYT 173
             KETLV   DA T+KIGRNVVLEL+ T+VDP+T  PKKS+ AVLKDWSKKSN KAERVHYT
Sbjct:   107 KETLVKHLDAFTDKIGRNVVLELMSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAERVHYT 166

Query:   174 AEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIF 233
             AEF VDS FG+PGAITV NKHQKEFFLE+ITIEGFACGPVHF CNSWVQS KDHP KRI 
Sbjct:   167 AEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRIL 226

Query:   234 FANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVR 293
             F NQPYLPSETP+GLR LREKEL+++RG GKG RKLSDRIYDYDVYND+GNPD   E  R
Sbjct:   227 FTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDVYNDIGNPDISRELAR 286

Query:   294 PSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKG 353
             P+LGG + PYPRRCRTGR  TDTD+++E R+EKPLP+YVPRDEQFEESKQ+ F+A RLK 
Sbjct:   287 PTLGGREFPYPRRCRTGRSSTDTDMMSERRVEKPLPMYVPRDEQFEESKQNTFAACRLKA 346

Query:   354 ALHNLIPLLKASISARNHDFSGFSDIDSLYSEXXXXXXXXXXXXXXXXXXXXVVSKIQES 413
              LHNLIP LKASI A   DF+ F +IDSLY E                    +V+ +Q+S
Sbjct:   347 VLHNLIPSLKASILAE--DFANFGEIDSLYKEGLLLKLGFQDDMFKKFPLPKIVTTLQKS 404

Query:   414 SQGLLKYNSPKIL 426
             S+GLL+Y++PKI+
Sbjct:   405 SEGLLRYDTPKIV 417
GO:0009507 "chloroplast" evidence=ISM
GO:0009611 "response to wounding" evidence=IEP;RCA;TAS
GO:0009617 "response to bacterium" evidence=IEP
GO:0016165 "lipoxygenase activity" evidence=IDA
GO:0010193 "response to ozone" evidence=IEP
GO:0009555 "pollen development" evidence=IGI
GO:0009901 "anther dehiscence" evidence=IGI
GO:0048653 "anther development" evidence=IGI
GO:0080086 "stamen filament development" evidence=IGI
GO:0034440 "lipid oxidation" evidence=IDA
GO:0009620 "response to fungus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA;TAS
GO:0009753 "response to jasmonic acid stimulus" evidence=RCA
GO:0009873 "ethylene mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0052542 "defense response by callose deposition" evidence=RCA
GO:0006952 "defense response" evidence=TAS
GO:0040007 "growth" evidence=TAS
TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.13.11.120.824
3rd Layer1.13.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_1580006
lipoxygenase (EC-1.13.11.12); Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity) (896 aa)
(Populus trichocarpa)
Predicted Functional Partners:
CYP74A1
cytochrome P450 allene oxide synthase (EC-4.2.1.92) (526 aa)
     •• 0.902
gw1.XVIII.245.1
SubName- Full=Putative uncharacterized protein; (138 aa)
     •  0.899
gw1.XVI.1394.1
hypothetical protein (823 aa)
     •  0.899
gw1.40.286.1
phospholipase A1 (EC-3.1.1.32) (357 aa)
     •  0.899
fgenesh4_pg.C_LG_II001255
phospholipase A1 (EC-3.1.1.32) (367 aa)
     •  0.899
eugene3.00060391
hypothetical protein (856 aa)
     •  0.899
CYP74B7
cytochrome P450 fatty acid hydroperoxide lyase (492 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_VIII0936
SubName- Full=Putative uncharacterized protein; (642 aa)
     •  0.899
grail3.0064002701
SubName- Full=Putative uncharacterized protein; (382 aa)
      • 0.502

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
PLN02264 919 PLN02264, PLN02264, lipoxygenase 0.0
PLN02305 918 PLN02305, PLN02305, lipoxygenase 1e-116
PLN02337 866 PLN02337, PLN02337, lipoxygenase 9e-85
cd01751137 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox 1e-49
pfam00305 667 pfam00305, Lipoxygenase, Lipoxygenase 1e-45
smart00308105 smart00308, LH2, Lipoxygenase homology 2 (beta bar 2e-17
pfam01477115 pfam01477, PLAT, PLAT/LH2 domain 6e-12
>gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase Back     alignment and domain information 
 Score =  648 bits (1673), Expect = 0.0
 Identities = 297/431 (68%), Positives = 340/431 (78%), Gaps = 22/431 (5%)

Query: 1   MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLV-PVQQRRVHSRKAG 59
           MAL +E MG   IFERSS  SSS         F  +K  Q+ QF + P +Q ++  R+  
Sbjct: 1   MALAKEIMGGRLIFERSSFVSSSK-------HFRNSKRTQRTQFSINPFRQEQL--RRVV 51

Query: 60  AAGVRRGINNPVAALSEDLVKGAASSAVPGA---AEKPVKFKVRAVLTVRKNIKEDFKET 116
            +G        VAA+SEDLVK    S V  +    EK VKFKVRAV+TVR   KED KET
Sbjct: 52  KSG-------VVAAISEDLVKTLRVSTVRKSEEEEEKAVKFKVRAVVTVRNKNKEDLKET 104

Query: 117 LVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEF 176
           LV   DA T+KIGRNVVLEL+ T+VDP+TK PKKS+ AVLKDWSKKSN+KAERVHYTAEF
Sbjct: 105 LVKHLDAFTDKIGRNVVLELISTQVDPKTKEPKKSKAAVLKDWSKKSNIKAERVHYTAEF 164

Query: 177 LVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFAN 236
            VDS FG+PGAITV NKHQKEFFLE+ITIEGFACGPVHF CNSWVQS KDHPGKRIFF N
Sbjct: 165 TVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTN 224

Query: 237 QPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSL 296
           QPYLPSETPAGLRALREKEL+++RG GKGVRKLSDRIYD+DVYNDLGNPD+  E  RP+L
Sbjct: 225 QPYLPSETPAGLRALREKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTL 284

Query: 297 GGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALH 356
           GG++ PYPRRCRTGRLPTD+D++AESR+EKPLP+YVPRDEQFEESKQD F+AGRLK  LH
Sbjct: 285 GGKKIPYPRRCRTGRLPTDSDMMAESRVEKPLPMYVPRDEQFEESKQDTFAAGRLKAVLH 344

Query: 357 NLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQG 416
           NLIP LKASI A   DF+ F +IDSLY EGLLL LG +D + KK PLP VV+ +QESS+G
Sbjct: 345 NLIPSLKASILA--EDFANFGEIDSLYKEGLLLKLGFQDDIFKKFPLPKVVTTLQESSEG 402

Query: 417 LLKYNSPKILS 427
           LLKY++PKILS
Sbjct: 403 LLKYDTPKILS 413

Length = 919
>gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase Back     alignment and domain information
>gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase Back     alignment and domain information
>gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase Back     alignment and domain information
>gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 484
PLN02264 919 lipoxygenase 100.0
PLN02305 918 lipoxygenase 100.0
PLN02337 866 lipoxygenase 100.0
PF00305 667 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li 100.0
cd01751137 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re 100.0
smart00308105 LH2 Lipoxygenase homology 2 (beta barrel) domain. 99.37
PF01477113 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg 99.03
cd00113116 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin 98.86
cd02899109 PLAT_SR Scavenger receptor protein. A subfamily of 98.27
cd01753113 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u 98.04
cd01756120 PLAT_repeat PLAT/LH2 domain repeats of family of p 97.78
cd01752120 PLAT_polycystin PLAT/LH2 domain of polycystin-1 li 97.75
cd01757114 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter 97.75
cd01754129 PLAT_plant_stress PLAT/LH2 domain of plant-specifi 97.57
>PLN02264 lipoxygenase Back     alignment and domain information 
Probab=100.00  E-value=1.2e-120  Score=997.81  Aligned_cols=414  Identities=70%  Similarity=1.094  Sum_probs=375.2

Q ss_pred             Cchhhhhccccccc-ccCCCcccccchhcccchhhccccccccccccccccccccccccccccccccccCCcccccccce
Q 011499            1 MALTREFMGAFSIF-ERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLV   79 (484)
Q Consensus         1 ma~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (484)
                      ||+++|||| ++++ ++++| .+++++++++...+++||+ .+|+.      ..+-+|.++       ..+|++++++++
T Consensus         1 ~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~-------~~~~~~~~~~~~   64 (919)
T PLN02264          1 MALAKEIMG-GRLIFERSSF-VSSSKHFRNSKRTQRTQFS-INPFR------QEQLRRVVK-------SGVVAAISEDLV   64 (919)
T ss_pred             Cchhhhhhc-ceeeccCccc-ccchHHHhhcccchhceec-ccccc------HHHHHHHhc-------cCCeeeehHHHH
Confidence            999999999 6655 99999 9999999998889889994 57874      111122322       337899999988


Q ss_pred             eeccccc---ccCCCCCcceEEEEEEEEEEecccccccccccchhhhhhhhcCCcEEEEEeeeecCCCCCCCcccccccc
Q 011499           80 KGAASSA---VPGAAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVL  156 (484)
Q Consensus        80 ~~~~~~~---~~~~~~~~~~~~vka~v~v~~~~~~~~~~~~~~~lD~~~dllGk~v~LqLVS~e~dp~tg~~k~s~~a~l  156 (484)
                      ++...++   +..-.+|++.++|+|+|+|++++++++++..++++|+++|++|++|+|||||+++||+||+||+|++++|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~~~~~D~~~~~~G~~v~lqLVSs~~~~~tg~~~~~~~a~l  144 (919)
T PLN02264         65 KTLRVSTVRKSEEEEEKAVKFKVRAVVTVRNKNKEDLKETLVKHLDAFTDKIGRNVVLELISTQVDPKTKEPKKSKAAVL  144 (919)
T ss_pred             HhhccccccccccCcccceEEEEEEEEEEEeccccchhhcccchhhHHHHHhCCeEEEEEEeccccCCCCCccCCCcchh
Confidence            8765321   1122455677999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccceEEEEEEeccCCCCCceEEEEEecCCCcEEEeEEEEeecCCceEEEEeccceecCCCCCCceEEeeC
Q 011499          157 KDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFAN  236 (484)
Q Consensus       157 ~~w~~~~~~~~~~~~y~v~F~v~~dfG~PGAi~V~N~h~~EffL~sItle~~p~g~i~FpCnSWV~~~~~~~~~RiFFsn  236 (484)
                      ++|+++....+++.+|+++|+||++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||+++|+.+||||+|
T Consensus       145 ~~~~~~~~~~~~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~g~v~F~cnSWV~p~~~~~~~RiFF~N  224 (919)
T PLN02264        145 KDWSKKSNIKAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTN  224 (919)
T ss_pred             cccccCCCCCCCceEEEEEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCCCcEEEecCCccccCcCCCCCceEecC
Confidence            99998755567788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCcCCCchhhHHHHHHHHHHhhCCCCCcccccCeeeecccccCCCCCCCCCCCcccccCCCCCCCCCccCCCCCCCCC
Q 011499          237 QPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDT  316 (484)
Q Consensus       237 kaYLPseTP~gL~~lReeEL~~LRGdGtGeRK~~DRIYDYdvYNDLGnPDk~~~l~RPVLGGs~~PYPRRcRTGRpptkt  316 (484)
                      |+|||+|||+||++|||+||++|||||+||||+|||||||||||||||||++++++||||||++||||||||||||||+|
T Consensus       225 k~YLP~~tP~~l~~~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~  304 (919)
T PLN02264        225 QPYLPSETPAGLRALREKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKKIPYPRRCRTGRLPTDS  304 (919)
T ss_pred             CCcCcccCCHHHHHHHHHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCCCCCCCCCcCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCcccCCCCCCChhhhhhhHhhHHHHHHHhhhhhHHHhhccCCCCCCCHHHHHHhhhcCCCCCcccccc
Q 011499          317 DLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDG  396 (484)
Q Consensus       317 DP~sEsR~~~~~~~YVPRDE~Fs~~K~~dF~~~~lks~~~~liP~l~~~~~~~~~~F~sF~DI~~LY~~Gi~l~~~~~~~  396 (484)
                      ||+||||.+++.++||||||+|+++|++||+++++||++|+++|+|+++++.+  +|+||+||++||++|++||....++
T Consensus       305 dp~~Esr~~~~~~iYvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~--~F~~f~~i~~Ly~~g~~l~~~~~~~  382 (919)
T PLN02264        305 DMMAESRVEKPLPMYVPRDEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE--DFANFGEIDSLYKEGLLLKLGFQDD  382 (919)
T ss_pred             CCcccccccCCCceeCCCCCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC--CCCCHHHHHHHHhcCCcCCcchhhh
Confidence            99999998766668999999999999999999999999999999999998855  9999999999999999999753344


Q ss_pred             ccccCCchhhHhhhhccCCcccccCCCcccccCCcc
Q 011499          397 LLKKLPLPNVVSKIQESSQGLLKYNSPKILSSKYSV  432 (484)
Q Consensus       397 ~~~~~p~~~l~k~i~~~~e~~LKFp~P~vi~~Dk~a  432 (484)
                      .++++|++.++++|+++++.+||||+|+||++||+|
T Consensus       383 ~~~~~p~~~~~~~~~~~~~~~lkf~~P~vi~~d~~~  418 (919)
T PLN02264        383 IFKKFPLPKVVTTLQESSEGLLKYDTPKILSKDKFA  418 (919)
T ss_pred             HhhcCChHHHHHHhhhcccccccCCCCceeecChhh
Confidence            555689988999998889999999999999999987

>PLN02305 lipoxygenase Back     alignment and domain information
>PLN02337 lipoxygenase Back     alignment and domain information
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 Back     alignment and domain information
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 Back     alignment and domain information
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain Back     alignment and domain information
>cd02899 PLAT_SR Scavenger receptor protein Back     alignment and domain information
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase Back     alignment and domain information
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function Back     alignment and domain information
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins Back     alignment and domain information
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family Back     alignment and domain information
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
2iuj_A 853 Crystal Structure Of Soybean Lipoxygenase-B Length 8e-51
1rov_A 857 Lipoxygenase-3 Treated With Cumene Hydroperoxide Le 8e-51
1ik3_A 857 Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope 1e-50
1fgm_A 839 Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng 1e-47
2sbl_B 839 The Three-Dimensional Structure Of An Arachidonic A 1e-47
1y4k_A 839 Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng 1e-47
1fgo_A 839 Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng 1e-47
1fgr_A 839 Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng 1e-47
1fgq_A 839 Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng 1e-47
1fgt_A 839 Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng 1e-47
3bnb_A 839 Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 2e-47
3bnd_A 839 Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 2e-47
3pzw_A 839 Soybean Lipoxygenase-1 - Re-Refinement Length = 839 2e-47
3bnc_A 839 Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 3e-47
3bne_A 839 Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 3e-47
2iuk_A 864 Crystal Structure Of Soybean Lipoxygenase-D Length 6e-46
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 Back     alignment and structure 
Iteration: 1

 Score =  197 bits (502), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 104/223 (46%), Positives = 137/223 (61%), Gaps = 8/223 (3%)
Query: 165 VKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFA-CGPVHFQCNSWVQS 223
           + A+   Y A+F  DS+FG PGA  + N  Q EF+L+++ +E     G +HF CNSWV +
Sbjct: 88  IGAKEEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYN 147
Query: 224 TKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLG 283
           +K +   RIFFAN  YLPSETPA L   RE+ELK++RG G G RK  DRIYDYDVYNDLG
Sbjct: 148 SKHYKTDRIFFANNTYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLG 207
Query: 284 NPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLP-IYVPRDEQFEESK 342
           +PD+G ++ RP LGG   PYPRR RTGR  T  D       EKP   +Y+PRDE F   K
Sbjct: 208 DPDKGEKYARPVLGGSALPYPRRGRTGRGKTRKD----PNSEKPGDFVYLPRDEAFGHLK 263
Query: 343 QDAFSAGRLKGALHNLIPLLKASISAR--NHDFSGFSDIDSLY 383
              F A  +K    +++P+L  +      + DF  F+++  LY
Sbjct: 264 SSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDFDNFAEVRKLY 306
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 Back     alignment and structure
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 Back     alignment and structure
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 Back     alignment and structure
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 Back     alignment and structure
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 Back     alignment and structure
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 Back     alignment and structure
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 Back     alignment and structure
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 Back     alignment and structure
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 Back     alignment and structure
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 Back     alignment and structure
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 Back     alignment and structure
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 Back     alignment and structure
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 Back     alignment and structure
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 Back     alignment and structure
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query484
1f8n_A 839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 1e-124
2iuk_A 864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 1e-112
2iuj_A 853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 1e-107
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 8e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
3rde_A 573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 4e-09
3v98_A 691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 3e-05
3fg1_A 696 Allene oxide synthase-lipoxygenase protein; arichi 2e-04
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 Back     alignment and structure
 Score =  381 bits (978), Expect = e-124
 Identities = 119/337 (35%), Positives = 169/337 (50%), Gaps = 12/337 (3%)

Query: 96  KFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAV 155
             K++  + +    + +      +  D L   +GR+V L+L+           K  ++  
Sbjct: 5   GHKIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTF 63

Query: 156 LKDW-SKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGF-ACGPV 213
           L+   +    + A    +   F  D + G PGA  + N  Q EFFL+++T+E     G +
Sbjct: 64  LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123

Query: 214 HFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRI 273
            F CNSWV +TK +   RIFFAN  Y+PSETPA L + RE+ELK +RG G G RK  DRI
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRI 183

Query: 274 YDYDVYNDLGNPDRGSEFVRPSLGG-EQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYV 332
           YDYDVYNDLGNPD+  +  RP LGG    PYPRR RTGR PT TD   E + E     YV
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGE---VFYV 240

Query: 333 PRDEQFEESKQDAFSAGRLKGALHNLIPLLKASIS--ARNHDFSGFSDIDSLYSEGLLLN 390
           PRDE     K         K     + P  +++    +   +F  F D+  LY  G+ L 
Sbjct: 241 PRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL- 299

Query: 391 LGLKDGLLKKLPLPNVVSKIQESSQGLLKYNSPKILS 427
              +D +   +PLP +    +   Q +LK+  P ++ 
Sbjct: 300 --PRDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQ 334
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query484
2iuk_A 864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 100.0
1f8n_A 839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 100.0
2iuj_A 853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 100.0
1lox_A 662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 100.0
3v98_A 691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 99.77
3fg1_A 696 Allene oxide synthase-lipoxygenase protein; arichi 99.74
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 99.71
3vf1_A 698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 99.7
3rde_A 573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 99.16
1olp_A370 Alpha-toxin; zinc phospholipase C, GAS gangrene de 97.94
2wxu_A370 Phospholipase C; cytolysis, hydrolase, hemolysis, 97.93
3cwz_B384 RAB6IP1, RAB6-interacting protein 1; RAB small GTP 96.73
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Back     alignment and structure
Probab=100.00  E-value=2.8e-103  Score=864.11  Aligned_cols=326  Identities=37%  Similarity=0.620  Sum_probs=300.8

Q ss_pred             EEEEEEEEEEecccccccccc----------------------cchhhhhhhhcCCcEEEEEeeeecCCCCCCCcccccc
Q 011499           97 FKVRAVLTVRKNIKEDFKETL----------------------VNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREA  154 (484)
Q Consensus        97 ~~vka~v~v~~~~~~~~~~~~----------------------~~~lD~~~dllGk~v~LqLVS~e~dp~tg~~k~s~~a  154 (484)
                      .+|||+|+|++++++++++..                      ++++|+++|++|++|+|||||+++||+||+||+|+++
T Consensus         9 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqlvs~~~~~~~~~~k~~~~~   88 (864)
T 2iuk_A            9 QKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGKEV   88 (864)
T ss_dssp             CCEEEEEEEEEGGGSCHHHHTTC-----------------------CCSGGGSCSTTEEEEEEEEEEECSSSCEEEEEEE
T ss_pred             CEEEEEEEEEecccccccccccccccccccccccccccccccccchhhhHHHhccCeEEEEEEecccCCCCCCCcCCCcc
Confidence            479999999999999998887                      8999999999999999999999999999999999999


Q ss_pred             cccccc-ccccccccceEEEEEEeccCCCCCceEEEEEecCCCcEEEeEEEEeecCC-ceEEEEeccceecCCCCCCceE
Q 011499          155 VLKDWS-KKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRI  232 (484)
Q Consensus       155 ~l~~w~-~~~~~~~~~~~y~v~F~v~~dfG~PGAi~V~N~h~~EffL~sItle~~p~-g~i~FpCnSWV~~~~~~~~~Ri  232 (484)
                      +|++|. ++....+++++|+++|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||.++|+.+||
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~Ri  168 (864)
T 2iuk_A           89 YLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRI  168 (864)
T ss_dssp             ECCEEECSCSSCCTTCEEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGSSSCEE
T ss_pred             cccccccCCCcCCCCcEEEEEEEEeeccCCCcceEEEEeCCCCceEEEEEEEecCCCCCcEEEecCccccCCCCCCCCce
Confidence            999998 43336778899999999999999999999999999999999999999998 9999999999999999999999


Q ss_pred             EeeCcccCcCCCchhhHHHHHHHHHHhhCCCCCcccccCeeeecccccCCCCCCCCCCCcccccCCC-CCCCCCccCCCC
Q 011499          233 FFANQPYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGE-QRPYPRRCRTGR  311 (484)
Q Consensus       233 FFsnkaYLPseTP~gL~~lReeEL~~LRGdGtGeRK~~DRIYDYdvYNDLGnPDk~~~l~RPVLGGs-~~PYPRRcRTGR  311 (484)
                      ||+||+|||+|||+||++|||+||++|||||+||||+|||||||||||||||||++++  ||||||| +|||||||||||
T Consensus       169 fF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--rpvlggs~~~pyPrR~rtgr  246 (864)
T 2iuk_A          169 FFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSIYPYPLRVRTGR  246 (864)
T ss_dssp             EEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--CCCBSSSSSSCCCCEECCCC
T ss_pred             eccCCCcCcccCcHHHHHHHHHHHHHhcCCCCCcccccccchhhhhhhcCCCcccCCC--CcccCCCCCCCCCccccCCC
Confidence            9999999999999999999999999999999999999999999999999999999988  9999998 999999999999


Q ss_pred             CCCCCCCccccccCCCCCcccCCCCCCChhhhhhhHhhHHHHHHHhhhhhHHHhhc--c-CCCCCCCHHHHHHhhhcCCC
Q 011499          312 LPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASIS--A-RNHDFSGFSDIDSLYSEGLL  388 (484)
Q Consensus       312 pptktDP~sEsR~~~~~~~YVPRDE~Fs~~K~~dF~~~~lks~~~~liP~l~~~~~--~-~~~~F~sF~DI~~LY~~Gi~  388 (484)
                      |||+|||++|||.+    +||||||+|++.|++||.+++++|++|.++|+|+++++  + +..+|+||+||++||++|++
T Consensus       247 ~~~~~dp~~e~~~~----~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~ly~~g~~  322 (864)
T 2iuk_A          247 ERTRTDPNSEKPGE----VYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIK  322 (864)
T ss_dssp             CBCSSCTTSBCCCC----CCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTTTSSCEE
T ss_pred             CCCCCCCCcccccc----CCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccCcCCCCCHHHHHHHHhcccc
Confidence            99999999999953    89999999999999999999999999999999999985  3 67899999999999999999


Q ss_pred             CCccccccccccCCchhhHhhh-hccCCcccccCCCcccccCCcc
Q 011499          389 LNLGLKDGLLKKLPLPNVVSKI-QESSQGLLKYNSPKILSSKYSV  432 (484)
Q Consensus       389 l~~~~~~~~~~~~p~~~l~k~i-~~~~e~~LKFp~P~vi~~Dk~a  432 (484)
                      ||.   +.+.+.+|++ +++++ .++++.++|||+|+||++|+++
T Consensus       323 l~~---~~~~~~~p~~-~~~~~~~~~~e~~lk~p~P~vi~~~~~~  363 (864)
T 2iuk_A          323 LPT---DILSQISPLP-ALKEIFRTDGENVLQFPPPHVAKVSKSG  363 (864)
T ss_dssp             CCH---HHHHHHSSCT-TTTTTCBCTTSSEEBCCCCSSCSCSSSS
T ss_pred             Cch---hhhcccCcHH-HHHHHhhccccchhcCCCcceecccchh
Confidence            985   3344446775 55555 5578999999999999988743
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Back     alignment and structure
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 Back     alignment and structure
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A Back     alignment and structure
>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 484
d3bnea1 690 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom 6e-83
d3bnea2143 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl 7e-54
d2p0ma1 551 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory 2e-04
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 Back     information, alignment and structure

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

 Score =  268 bits (686), Expect = 6e-83
 Identities = 78/191 (40%), Positives = 102/191 (53%), Gaps = 9/191 (4%)

Query: 240 LPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGG- 298
           +PSETPA L   RE+ELK +RG G G RK  DRIYDYDVYNDLGNPD+  +  RP LGG 
Sbjct: 1   VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGS 60

Query: 299 EQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNL 358
              PYPRR RTGR PT TD   E + E     YVPRDE     K         K     +
Sbjct: 61  STFPYPRRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIV 117

Query: 359 IPLLKASISARNH--DFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLPNVVSKIQESSQG 416
            P  +++   ++   +F  F D+  LY  G+ L    +D +   +PLP +    +   Q 
Sbjct: 118 QPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKL---PRDVISTIIPLPVIKELYRTDGQH 174

Query: 417 LLKYNSPKILS 427
           +LK+  P ++ 
Sbjct: 175 ILKFPQPHVVQ 185
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 Back     information, alignment and structure
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query484
d3bnea1 690 Lipoxigenase, C-terminal domain {Soybean (Glycine 100.0
d3bnea2143 Plant lipoxigenase {Soybean (Glycine max), isozyme 100.0
d2p0ma1 551 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 99.17
d2p0ma2111 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 97.79
d1olpa2121 Alpha-toxin, C-terminal domain {Clostridium absonu 97.22
d1ca1a2121 Alpha-toxin, C-terminal domain {Clostridium perfri 96.83
d1rp1a1113 Pancreatic lipase, C-terminal domain {Dog (Canis f 92.72
d1bu8a1114 Pancreatic lipase, C-terminal domain {Rat (Rattus 91.94
d1gpla1112 Pancreatic lipase, C-terminal domain {Guinea pig ( 87.29
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=100.00  E-value=7.8e-66  Score=556.74  Aligned_cols=187  Identities=42%  Similarity=0.681  Sum_probs=176.6

Q ss_pred             CcCCCchhhHHHHHHHHHHhhCCCCCcccccCeeeecccccCCCCCCCCCCCcccccCCC-CCCCCCccCCCCCCCCCCC
Q 011499          240 LPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGE-QRPYPRRCRTGRLPTDTDL  318 (484)
Q Consensus       240 LPseTP~gL~~lReeEL~~LRGdGtGeRK~~DRIYDYdvYNDLGnPDk~~~l~RPVLGGs-~~PYPRRcRTGRpptktDP  318 (484)
                      ||+|||+||++|||+||++|||||+||||+|||||||||||||||||++++++||||||+ +||||||||||||||+|||
T Consensus         1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~rp~lgg~~~~pyprr~rtgr~~~~~dp   80 (690)
T d3bnea1           1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDP   80 (690)
T ss_dssp             CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCT
T ss_pred             CCccccHHHHHHHHHHHHHhCCCCCCCCCcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence            899999999999999999999999999999999999999999999999999999999998 8999999999999999999


Q ss_pred             ccccccCCCCCcccCCCCCCChhhhhhhHhhHHHHHHHhhhhhHHHhhc--cCCCCCCCHHHHHHhhhcCCCCCcccccc
Q 011499          319 LAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASIS--ARNHDFSGFSDIDSLYSEGLLLNLGLKDG  396 (484)
Q Consensus       319 ~sEsR~~~~~~~YVPRDE~Fs~~K~~dF~~~~lks~~~~liP~l~~~~~--~~~~~F~sF~DI~~LY~~Gi~l~~~~~~~  396 (484)
                      ++|||.+   .+||||||+|+++|++||+++++||++|+++|.|+++++  ++..+|+||+||++||++|+++|.   +.
T Consensus        81 ~~e~r~~---~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~~---~~  154 (690)
T d3bnea1          81 NTEKQGE---VFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPR---DV  154 (690)
T ss_dssp             TSBCCCS---SCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECCH---HH
T ss_pred             CcccCCC---CCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccCch---hh
Confidence            9999987   499999999999999999999999999999999999875  567899999999999999999994   44


Q ss_pred             ccccCCchhhHhhhhccCCcccccCCCcccccCCcc
Q 011499          397 LLKKLPLPNVVSKIQESSQGLLKYNSPKILSSKYSV  432 (484)
Q Consensus       397 ~~~~~p~~~l~k~i~~~~e~~LKFp~P~vi~~Dk~a  432 (484)
                      +.+.+|++.+.+.+.++++.+||||+|+||++|++|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~  190 (690)
T d3bnea1         155 ISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSA  190 (690)
T ss_dssp             HHHHTTSTTGGGGCEECSSSEEECCCCGGGSSCSSG
T ss_pred             hhhcccHHHHHHHhhccccceeecCCchhhhccccc
Confidence            566678887777778889999999999999999986
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} Back     information, alignment and structure
>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} Back     information, alignment and structure
>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]} Back     information, alignment and structure