Citrus Sinensis ID: 011675

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
MAPSISKVASGVRTLVDGSDNQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGMTSN
ccccccccccccccccccccccccccEEEEEccEEEEccEEEcccccccEEEccccccccccccccccEEEEcccccccccccEEEcccccccEEEEEEEEcccccccccccccccccHHccEEEEEccccccccEEEEEEEEEccEEEEEEccccccEEEEEEccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHcccccccHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHcccccEEEEEccccccccccccccccccccccEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHcccccccEEccccccc
cccccccccccccccccccccccccccEEEcccEEEEccEEEEccccccEEEEccccccccccccccccEEEEEEcccccccEEEEcccccccEEEEEEEEEEHHHccccccccccccHHHEEEEEEcccccccEEEEEEEEccccEEEEEEcccccEEEEEEEccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHcccccHHccccccHHHccccccHHHHHccccHHHHHHHHHHHHHcccccEEEEEEccccEcccccccccccccccccccHHHHHHcHcHHHHHHHHccccccccccccccHHHHHHHHHHHHcccccEEEEEHHHHccccccccccccHHHcccEEccccccccccccccccHccHHccccEEccHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEHccccccHEEccHHHEEEEEEccccc
MAPSISKVASGVrtlvdgsdnqstniditledsklhanghvflsdvpdnvtltpstatateksvfsnvgsfigfdsfepksrhvvpigklkniRFMSIFRFKVWWTTHwvgsngrdlenetQLVIldnstdtgrpyVLLLpivegpfraslqpgaddyVDVCvesgstkvtgdsFRSVVYVHLGDDPFKLVKDAMRVVRSHLgtfklldektpppivdkfgwctwdafyltvqphgvmegvkglvdggcppglvliddgwqsishdedpidseginrtaageqmpcrllryqenfkfrdyvspnggdssdnkgmGAFIRDLKDEFKTVDQVYVWHALCGywgglrpnipglpekttvvkpklspgleltmeDLAVDKIvnngvgfvppelVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALgrvgmtsn
mapsiskvasgvrtlvdgsdnqstNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFigfdsfepksrhvvpigklknirFMSIFRFKVWWTTHWVgsngrdleneTQLVILdnstdtgrPYVLLLPIVEGPFRASLQPGADDYVDVCVESgstkvtgdsfrSVVYVHLGDDPFKLVKDAMRVVRSHLgtfklldektpppIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVspnggdssdnkGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIalgrvgmtsn
MAPSISKVASGVRTLVDGSDNQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGMTSN
***************************ITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSI********************MPCRLLRYQENFKFRDYV************MGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRV*****
****************************TLEDSKLHANGHVFLSDVPDNVTLTPSTA****KSVFSNVGSFIGFD***PK*RHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVR***************PIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDP*************QMPCRLLRYQEN******************GMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSP**ELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGM***
MAPSISKVASGVRTLVDGSDNQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGMTSN
********************NQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGMTSN
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MAPSISKVASGVRTLVDGSDNQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGMTSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query480 2.2.26 [Sep-21-2011]
Q9FND9 783 Probable galactinol--sucr yes no 0.945 0.579 0.699 0.0
Q5VQG4 783 Galactinol--sucrose galac yes no 0.968 0.593 0.663 0.0
Q8VWN6 798 Galactinol--sucrose galac N/A no 0.979 0.588 0.618 1e-180
Q93XK2 853 Stachyose synthase OS=Pis N/A no 0.927 0.521 0.397 1e-101
Q94A08 773 Probable galactinol--sucr no no 0.864 0.536 0.390 2e-87
Q8RX87 749 Probable galactinol--sucr no no 0.877 0.562 0.380 4e-81
Q84VX0 754 Probable galactinol--sucr no no 0.881 0.561 0.389 2e-78
Q9SYJ4 876 Probable galactinol--sucr no no 0.533 0.292 0.473 3e-66
Q97U94 648 Alpha-galactosidase OS=Su yes no 0.3 0.222 0.276 6e-11
>sp|Q9FND9|RFS5_ARATH Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1 Back     alignment and function desciption
 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/472 (69%), Positives = 376/472 (79%), Gaps = 18/472 (3%)

Query: 19  SDNQSTNIDIT----LEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNV--GSFI 72
           SD+    +D T    LEDS L ANG V L+DVP NVTLT S     +  V  +V  GSFI
Sbjct: 9   SDSGINGVDFTEKFRLEDSTLLANGQVVLTDVPVNVTLTSSPYLVDKDGVPLDVSAGSFI 68

Query: 73  GFD-SFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTD 131
           GF+   EPKS HV  IGKLKNIRFMSIFRFKVWWTTHWVGSNGRD+ENETQ++ILD S  
Sbjct: 69  GFNLDGEPKSHHVASIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDIENETQIIILDQSGS 128

Query: 132 TG-------RPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLG 184
                    RPYVLLLP++EG FR+S Q G DD V VCVESGST+VTG  FR +VYVH G
Sbjct: 129 DSGPGSGSGRPYVLLLPLLEGSFRSSFQSGEDDDVAVCVESGSTEVTGSEFRQIVYVHAG 188

Query: 185 DDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGL 244
           DDPFKLVKDAM+V+R H+ TFKLL+EK+PP IVDKFGWCTWDAFYLTV P GV +GVK L
Sbjct: 189 DDPFKLVKDAMKVIRVHMNTFKLLEEKSPPGIVDKFGWCTWDAFYLTVNPDGVHKGVKCL 248

Query: 245 VDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPN 304
           VDGGCPPGLVLIDDGWQSI HD D ID EG+N T AGEQMPCRLL+++EN KF+DYVSP 
Sbjct: 249 VDGGCPPGLVLIDDGWQSIGHDSDGIDVEGMNITVAGEQMPCRLLKFEENHKFKDYVSPK 308

Query: 305 GGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSP 364
                ++ GM AF+RDLKDEF TVD +YVWHALCGYWGGLRP  P LP  +T+++P+LSP
Sbjct: 309 ---DQNDVGMKAFVRDLKDEFSTVDYIYVWHALCGYWGGLRPEAPALP-PSTIIRPELSP 364

Query: 365 GLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCEN 424
           GL+LTMEDLAVDKI+  G+GF  P+L  + YEGLHSHL+  GIDGVKVDVIH+LE+LC+ 
Sbjct: 365 GLKLTMEDLAVDKIIETGIGFASPDLAKEFYEGLHSHLQNAGIDGVKVDVIHILEMLCQK 424

Query: 425 YGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVG 476
           YGGRVDLAKAY+KALT+SV KHF GNGVIASMEHCNDFM LGTEAI+LGRVG
Sbjct: 425 YGGRVDLAKAYFKALTSSVNKHFNGNGVIASMEHCNDFMFLGTEAISLGRVG 476
Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 8EC: 2
>sp|Q5VQG4|RFS_ORYSJ Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1 Back     alignment and function description
>sp|Q8VWN6|RFS_PEA Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1 Back     alignment and function description
>sp|Q93XK2|STSYN_PEA Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1 Back     alignment and function description
>sp|Q94A08|RFS2_ARATH Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2 Back     alignment and function description
>sp|Q8RX87|RFS6_ARATH Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2 Back     alignment and function description
>sp|Q84VX0|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SYJ4|RFS4_ARATH Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=3 Back     alignment and function description
>sp|Q97U94|AGAL_SULSO Alpha-galactosidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=galS PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query480
255567355 787 Stachyose synthase precursor, putative [ 0.985 0.601 0.783 0.0
224133028 783 predicted protein [Populus trichocarpa] 0.981 0.601 0.778 0.0
224093196 750 predicted protein [Populus trichocarpa] 0.929 0.594 0.788 0.0
225452378 775 PREDICTED: galactinol--sucrose galactosy 0.962 0.596 0.761 0.0
224131914 775 predicted protein [Populus trichocarpa] 0.916 0.567 0.773 0.0
449446690 784 PREDICTED: probable galactinol--sucrose 0.979 0.599 0.721 0.0
4106395 784 raffinose synthase [Cucumis sativus] 0.979 0.599 0.719 0.0
348162129 793 raffinose synthase [Boea hygrometrica] 0.983 0.595 0.692 0.0
357461865 786 Galactinol-sucrose galactosyltransferase 0.977 0.596 0.684 0.0
224133642 765 predicted protein [Populus trichocarpa] 0.943 0.592 0.704 0.0
>gi|255567355|ref|XP_002524657.1| Stachyose synthase precursor, putative [Ricinus communis] gi|223536018|gb|EEF37676.1| Stachyose synthase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/480 (78%), Positives = 415/480 (86%), Gaps = 7/480 (1%)

Query: 1   MAPSISKVASGVRTLVDGSD--NQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTAT 58
           MAPS+SK  SG   LV  S   N S    I+LEDS L ANGHVFLS VPDN+TLTPS   
Sbjct: 1   MAPSLSKANSGPEGLVVESYDINHSNQFVISLEDSNLKANGHVFLSCVPDNITLTPSRYA 60

Query: 59  ATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLE 118
            T+KS  + VGSFIGFDS E K RHV+ IGKLKNI+FMSIFRFKVWWTTHWVGSNGRDLE
Sbjct: 61  LTDKSS-TTVGSFIGFDSMESKDRHVISIGKLKNIKFMSIFRFKVWWTTHWVGSNGRDLE 119

Query: 119 NETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSV 178
           NETQ++ILD S D+GRPY+LLLP++EGPFRASLQPG DD +D+CVESGSTKV    F+SV
Sbjct: 120 NETQMLILDKS-DSGRPYILLLPLLEGPFRASLQPGNDDNIDICVESGSTKVLAAGFQSV 178

Query: 179 VYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVM 238
           +YVH+GDDP+KLVKDAM++V+ HLGTFKLL+EK PP IVDKFGWCTWDAFYLTV P G+ 
Sbjct: 179 LYVHIGDDPYKLVKDAMKIVKVHLGTFKLLEEKNPPGIVDKFGWCTWDAFYLTVHPQGIW 238

Query: 239 EGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFR 298
           EGVKGLVDGGCPPGLVLIDDGWQSISHDEDPI  EG+N   AGEQMPCRLL++QEN+KFR
Sbjct: 239 EGVKGLVDGGCPPGLVLIDDGWQSISHDEDPITKEGMNAAVAGEQMPCRLLKFQENYKFR 298

Query: 299 DYVSPN--GGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTT 356
           DYVSP      S++NKGMGAFI+DLK+EF +VD VYVWHALCGYWGGLRPN+PGLP+ T 
Sbjct: 299 DYVSPKSLANGSTENKGMGAFIKDLKEEFSSVDYVYVWHALCGYWGGLRPNVPGLPD-TV 357

Query: 357 VVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416
           VVKPKLSPGLELTMEDLAVDKIV+ GVG VPPE V+QMYEGLHSHL+ VGIDGVKVDVIH
Sbjct: 358 VVKPKLSPGLELTMEDLAVDKIVSTGVGLVPPETVEQMYEGLHSHLQNVGIDGVKVDVIH 417

Query: 417 LLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVG 476
           LLE+LCENYGGRVDLAKAYYKALTASVRKHF GNGVIASMEHCNDFM LGTEAI LGRVG
Sbjct: 418 LLEMLCENYGGRVDLAKAYYKALTASVRKHFNGNGVIASMEHCNDFMFLGTEAICLGRVG 477

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224133028|ref|XP_002327943.1| predicted protein [Populus trichocarpa] gi|222837352|gb|EEE75731.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224093196|ref|XP_002309828.1| predicted protein [Populus trichocarpa] gi|222852731|gb|EEE90278.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225452378|ref|XP_002275628.1| PREDICTED: galactinol--sucrose galactosyltransferase [Vitis vinifera] gi|296087624|emb|CBI34880.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224131914|ref|XP_002328139.1| predicted protein [Populus trichocarpa] gi|222837654|gb|EEE76019.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449446690|ref|XP_004141104.1| PREDICTED: probable galactinol--sucrose galactosyltransferase 5-like [Cucumis sativus] gi|124057819|gb|ABD72603.1| raffinose synthase [Cucumis sativus] Back     alignment and taxonomy information
>gi|4106395|gb|AAD02832.1| raffinose synthase [Cucumis sativus] Back     alignment and taxonomy information
>gi|348162129|gb|AEP68101.1| raffinose synthase [Boea hygrometrica] Back     alignment and taxonomy information
>gi|357461865|ref|XP_003601214.1| Galactinol-sucrose galactosyltransferase [Medicago truncatula] gi|355490262|gb|AES71465.1| Galactinol-sucrose galactosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|224133642|ref|XP_002321625.1| predicted protein [Populus trichocarpa] gi|222868621|gb|EEF05752.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query480
TAIR|locus:2170528 783 SIP1 "AT5G40390" [Arabidopsis 0.945 0.579 0.707 7e-180
UNIPROTKB|Q5VQG4 783 RFS "Galactinol--sucrose galac 0.968 0.593 0.665 4.9e-172
UNIPROTKB|Q93XK2 853 STS1 "Stachyose synthase" [Pis 0.562 0.316 0.444 8.9e-113
TAIR|locus:2141425 876 STS "AT4G01970" [Arabidopsis t 0.531 0.291 0.479 5.6e-109
TAIR|locus:2020452 754 SIP1 "AT1G55740" [Arabidopsis 0.875 0.557 0.402 7.4e-82
TAIR|locus:2103488 773 SIP2 "AT3G57520" [Arabidopsis 0.870 0.540 0.393 2e-81
ASPGD|ASPL0000010056 863 aglF [Emericella nidulans (tax 0.266 0.148 0.263 3.4e-12
UNIPROTKB|Q97U94 648 galS "Alpha-galactosidase" [Su 0.231 0.171 0.314 4.4e-10
UNIPROTKB|G4NBB7 908 MGG_11554 "Seed imbibition pro 0.272 0.144 0.269 2.4e-09
TAIR|locus:2170528 SIP1 "AT5G40390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1746 (619.7 bits), Expect = 7.0e-180, P = 7.0e-180
 Identities = 334/472 (70%), Positives = 381/472 (80%)

Query:    19 SDNQSTNIDIT----LEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNV--GSFI 72
             SD+    +D T    LEDS L ANG V L+DVP NVTLT S     +  V  +V  GSFI
Sbjct:     9 SDSGINGVDFTEKFRLEDSTLLANGQVVLTDVPVNVTLTSSPYLVDKDGVPLDVSAGSFI 68

Query:    73 GFD-SFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNS-T 130
             GF+   EPKS HV  IGKLKNIRFMSIFRFKVWWTTHWVGSNGRD+ENETQ++ILD S +
Sbjct:    69 GFNLDGEPKSHHVASIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDIENETQIIILDQSGS 128

Query:   131 DTG------RPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLG 184
             D+G      RPYVLLLP++EG FR+S Q G DD V VCVESGST+VTG  FR +VYVH G
Sbjct:   129 DSGPGSGSGRPYVLLLPLLEGSFRSSFQSGEDDDVAVCVESGSTEVTGSEFRQIVYVHAG 188

Query:   185 DDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGL 244
             DDPFKLVKDAM+V+R H+ TFKLL+EK+PP IVDKFGWCTWDAFYLTV P GV +GVK L
Sbjct:   189 DDPFKLVKDAMKVIRVHMNTFKLLEEKSPPGIVDKFGWCTWDAFYLTVNPDGVHKGVKCL 248

Query:   245 VDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPN 304
             VDGGCPPGLVLIDDGWQSI HD D ID EG+N T AGEQMPCRLL+++EN KF+DYVSP 
Sbjct:   249 VDGGCPPGLVLIDDGWQSIGHDSDGIDVEGMNITVAGEQMPCRLLKFEENHKFKDYVSPK 308

Query:   305 GGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSP 364
               D +D  GM AF+RDLKDEF TVD +YVWHALCGYWGGLRP  P LP  +T+++P+LSP
Sbjct:   309 --DQND-VGMKAFVRDLKDEFSTVDYIYVWHALCGYWGGLRPEAPALPP-STIIRPELSP 364

Query:   365 GLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCEN 424
             GL+LTMEDLAVDKI+  G+GF  P+L  + YEGLHSHL+  GIDGVKVDVIH+LE+LC+ 
Sbjct:   365 GLKLTMEDLAVDKIIETGIGFASPDLAKEFYEGLHSHLQNAGIDGVKVDVIHILEMLCQK 424

Query:   425 YGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVG 476
             YGGRVDLAKAY+KALT+SV KHF GNGVIASMEHCNDFM LGTEAI+LGRVG
Sbjct:   425 YGGRVDLAKAYFKALTSSVNKHFNGNGVIASMEHCNDFMFLGTEAISLGRVG 476
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0005986 "sucrose biosynthetic process" evidence=IMP
GO:0010325 "raffinose family oligosaccharide biosynthetic process" evidence=IMP
GO:0019593 "mannitol biosynthetic process" evidence=IMP
GO:0047274 "galactinol-sucrose galactosyltransferase activity" evidence=ISS
GO:0009507 "chloroplast" evidence=IDA
GO:0006979 "response to oxidative stress" evidence=IEP
GO:0009414 "response to water deprivation" evidence=IEP
GO:0009737 "response to abscisic acid stimulus" evidence=IDA
UNIPROTKB|Q5VQG4 RFS "Galactinol--sucrose galactosyltransferase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q93XK2 STS1 "Stachyose synthase" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
TAIR|locus:2141425 STS "AT4G01970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020452 SIP1 "AT1G55740" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2103488 SIP2 "AT3G57520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000010056 aglF [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q97U94 galS "Alpha-galactosidase" [Sulfolobus solfataricus P2 (taxid:273057)] Back     alignment and assigned GO terms
UNIPROTKB|G4NBB7 MGG_11554 "Seed imbibition protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00640058
galactinol-sucrose galactosyltransferase/hydrolase, hydrolyzing O-glycosyl compounds (EC-2.4.1.82) (783 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query480
PLN02711 777 PLN02711, PLN02711, Probable galactinol--sucrose g 0.0
pfam05691 742 pfam05691, Raffinose_syn, Raffinose synthase or se 0.0
PLN02355 758 PLN02355, PLN02355, probable galactinol--sucrose g 1e-114
PLN02684 750 PLN02684, PLN02684, Probable galactinol--sucrose g 1e-110
PLN02982 865 PLN02982, PLN02982, galactinol-raffinose galactosy 1e-107
PLN02219 775 PLN02219, PLN02219, probable galactinol--sucrose g 1e-105
PLN02982 865 PLN02982, PLN02982, galactinol-raffinose galactosy 7e-70
COG3345 687 COG3345, GalA, Alpha-galactosidase [Carbohydrate t 0.001
>gnl|CDD|215381 PLN02711, PLN02711, Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information 
 Score =  929 bits (2403), Expect = 0.0
 Identities = 380/477 (79%), Positives = 412/477 (86%), Gaps = 10/477 (2%)

Query: 1   MAPSISKVASGVRTLVDGSDNQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATAT 60
           MAPS+SK  SG   LVDG +       ITLE S   ANGH FLSDVPDN+TLTPS     
Sbjct: 1   MAPSLSKSNSGAMGLVDGLNPSL----ITLEGSNFLANGHPFLSDVPDNITLTPSPYLPD 56

Query: 61  EKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENE 120
            K +    GSF+GFD+ EPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRD+ENE
Sbjct: 57  NKPITVGAGSFVGFDAGEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDVENE 116

Query: 121 TQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVY 180
           TQ++ILD S D+GRPYVLLLP++EGPFRASLQPG DD VD+CVESGSTKV G  FRSV+Y
Sbjct: 117 TQMMILDKS-DSGRPYVLLLPLIEGPFRASLQPGEDDNVDICVESGSTKVCGSEFRSVLY 175

Query: 181 VHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEG 240
           +H GDDP+KLVKDAM+VVR HLGTFKLL+EKTPP IVDKFGWCTWDAFYLTV P GV EG
Sbjct: 176 MHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLTVHPQGVWEG 235

Query: 241 VKGLVDGGCPPGLVLIDDGWQSISHDEDPI-DSEGINRTAAGEQMPCRLLRYQENFKFRD 299
           VKGLVDGGCPPGLVLIDDGWQSI HDEDPI D EG+NRT AGEQMPCRLL+++EN+KFRD
Sbjct: 236 VKGLVDGGCPPGLVLIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRD 295

Query: 300 YVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVK 359
           YVSP       NKGMGAFIRDLK+EFKTVD VYVWHALCGYWGGLRPN+PGLPE + VV 
Sbjct: 296 YVSPKS---LSNKGMGAFIRDLKEEFKTVDYVYVWHALCGYWGGLRPNVPGLPE-SKVVA 351

Query: 360 PKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLE 419
           PKLSPGL++TMEDLAVDKIVNNGVG VPPEL  QMYEGLHSHL+ VGIDGVKVDVIHLLE
Sbjct: 352 PKLSPGLKMTMEDLAVDKIVNNGVGLVPPELAYQMYEGLHSHLQSVGIDGVKVDVIHLLE 411

Query: 420 ILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVG 476
           +LCE YGGRV+LAKAYYKALTASVRKHF GNGVIASMEHCNDFM LGTEAI+LGRVG
Sbjct: 412 MLCEEYGGRVELAKAYYKALTASVRKHFNGNGVIASMEHCNDFMFLGTEAISLGRVG 468

Length = 777
>gnl|CDD|218695 pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1 Back     alignment and domain information
>gnl|CDD|215203 PLN02355, PLN02355, probable galactinol--sucrose galactosyltransferase 1 Back     alignment and domain information
>gnl|CDD|166325 PLN02684, PLN02684, Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>gnl|CDD|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>gnl|CDD|165863 PLN02219, PLN02219, probable galactinol--sucrose galactosyltransferase 2 Back     alignment and domain information
>gnl|CDD|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>gnl|CDD|225882 COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 480
PLN02982 865 galactinol-raffinose galactosyltransferase/ghydrol 100.0
PLN02711 777 Probable galactinol--sucrose galactosyltransferase 100.0
PLN02219 775 probable galactinol--sucrose galactosyltransferase 100.0
PLN02684 750 Probable galactinol--sucrose galactosyltransferase 100.0
PLN02355 758 probable galactinol--sucrose galactosyltransferase 100.0
PF05691 747 Raffinose_syn: Raffinose synthase or seed imbibiti 100.0
PF02065 394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 99.93
COG3345 687 GalA Alpha-galactosidase [Carbohydrate transport a 99.88
PLN03231 357 putative alpha-galactosidase; Provisional 99.87
PLN02229 427 alpha-galactosidase 99.86
PLN02692 412 alpha-galactosidase 99.86
PLN02808 386 alpha-galactosidase 99.85
PLN02899 633 alpha-galactosidase 99.84
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 99.57
KOG2366 414 consensus Alpha-D-galactosidase (melibiase) [Carbo 99.36
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 99.18
PRK10658 665 putative alpha-glucosidase; Provisional 99.08
PRK10426 635 alpha-glucosidase; Provisional 98.99
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 98.98
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 98.93
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 98.92
cd06595292 GH31_xylosidase_XylS-like This family represents a 98.87
PF01055 441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 98.84
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 98.83
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 98.83
cd06602 339 GH31_MGAM_SI_GAA This family includes the followin 98.8
cd06604 339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 98.69
cd06600317 GH31_MGAM-like This family includes the following 98.68
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 98.65
cd06601 332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 98.43
cd06603 339 GH31_GANC_GANAB_alpha This family includes the clo 98.43
COG1501 772 Alpha-glucosidases, family 31 of glycosyl hydrolas 98.36
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 98.34
PF10566273 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: 98.12
KOG1065 805 consensus Maltase glucoamylase and related hydrola 97.7
TIGR01515 613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 92.19
PRK12568 730 glycogen branching enzyme; Provisional 87.77
PF13200316 DUF4015: Putative glycosyl hydrolase domain 86.75
COG0296 628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 80.03
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information 
Probab=100.00  E-value=5.1e-134  Score=1085.90  Aligned_cols=448  Identities=51%  Similarity=0.933  Sum_probs=418.3

Q ss_pred             eeeeEeeCCeEEEcCeecccCCCCceEEccCCCcccccccc-----------cccceeecccCCCCCccceeecccccCc
Q 011675           25 NIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVF-----------SNVGSFIGFDSFEPKSRHVVPIGKLKNI   93 (480)
Q Consensus        25 ~~~~~~~~~~~~v~g~~~l~~~~~~v~~~~~~~~~~~~~~~-----------~~~g~~~g~~~~~~~~~~~~~lG~~~~~   93 (480)
                      --.|+|+||+|+|+|+++|++||+||++||+++.+. ++++           ++.|+||||++++|+|||+++||+++++
T Consensus        21 ~~~~~l~~g~l~v~G~~~L~~Vp~NV~~tp~s~~~~-~~~~p~~~~~~~~~~~~~g~FlG~~~~~~~srhv~~lG~l~~~   99 (865)
T PLN02982         21 PNYFDLSDGKLSVKGVPLLSDVPNNVTFTPFSSISI-SSDAPLPLLQRVQSNSHKGGFLGFTKESPSDRLTNSLGKFEGR   99 (865)
T ss_pred             CceeEecCCeEEECCEEeecCCCCceEecCcccccc-cccCccccccccccccccceEEeeecCCCccceeeecccccCc
Confidence            348999999999999999999999999999888752 1222           2679999999999999999999999999


Q ss_pred             ceEEEEEecccccccccCCCCCCCCcCceEEEEEcCCCCCccEEEEeEeecCCeEEEeccCCCCcEEEEEeeCCceeecc
Q 011675           94 RFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGD  173 (480)
Q Consensus        94 r~~al~R~k~wW~~pr~G~~~~~ip~etq~ll~~~~~~~~g~y~v~Lpl~~g~fra~L~~~~~~~l~l~~esg~~~v~~~  173 (480)
                      |||||||||+||||||+|++++|||.||||||+|.++  ...|+|+|||++|+||++||++.+++++||+|||+++|+++
T Consensus       100 rFms~FRfK~WWmt~~vG~~G~Dip~ETQ~llle~~~--~~~Yvv~lP~ieG~FRa~Lqg~~~~~~~ic~ESg~~~V~~s  177 (865)
T PLN02982        100 DFLSIFRFKTWWSTMWIGSSGSDLQMETQWVLLKVPE--IDSYVLIIPLIEGSFRSALHPGEDGHVMICAESGSTKVKAS  177 (865)
T ss_pred             eEEeeeehhhhccchhhcCCCCCCChhheEEEEEcCC--CceEEEEEEecCCceEEEecCCCCCCEEEEEecCCcccccc
Confidence            9999999999999999999999999999999999996  45799999999999999999999999999999999999999


Q ss_pred             ccceEEEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcE
Q 011675          174 SFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGL  253 (480)
Q Consensus       174 ~~~~~l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~  253 (480)
                      ++..++|||+|+|||++|++|++++|+|++||+++|+|++|.++|+||||||||||++||+++|++++++|+++|+||+|
T Consensus       178 ~~~~~~yvh~g~nPy~li~~a~~~v~~hl~TF~~~eeK~~P~~vd~FGWCTWDAFY~~V~p~GV~~Gv~~l~~gG~pprf  257 (865)
T PLN02982        178 SFNSIAYVHVSDNPYNLMKEAYSALRVHLNTFRLLEEKALPKIVDKFGWCTWDAFYLTVDPVGVWHGVKEFAEGGVPPRF  257 (865)
T ss_pred             ccceEEEEecCCCHHHHHHHHHHHHHHHhcccchhhhccCccccccceEEeechhhcccCHHHHHHHHHHHhcCCCCccE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcccCCCCCCCCC--C----------------------------
Q 011675          254 VLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVS--P----------------------------  303 (480)
Q Consensus       254 lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~--~----------------------------  303 (480)
                      ||||||||++.+|.++|.++.++++.+|+||++||.+|+||+||+++++  +                            
T Consensus       258 vIIDDGWQsi~~d~~~~~~~~~~~~~~g~q~~~RL~~~~En~KFrky~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~a~~  337 (865)
T PLN02982        258 LIIDDGWQSINFDGDNPNEDAKNLVLGGTQMTARLYRFDECEKFRNYKGGSMLGPDPPHFDPKKPKMLIYKAIEREHAEK  337 (865)
T ss_pred             EEEecchhhccccccCCchhhhhccccccchhhhhhcchhhhhhhccccccccCCCcccccccccchhhhcccchhhhhh
Confidence            9999999999987655545556889999999999999999999997432  0                            


Q ss_pred             ---------------------------C-----------------CCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccC
Q 011675          304 ---------------------------N-----------------GGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCG  339 (480)
Q Consensus       304 ---------------------------~-----------------~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~G  339 (480)
                                                 |                 |++++.+.|||++|++||++|++||||||||||+|
T Consensus       338 ~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Glk~~v~~ik~k~~~vk~VyVWHAL~G  417 (865)
T PLN02982        338 ARKKAIESGVTDLSEFDAKIKQLKKELDAMFDGEEKSVSSESESSGSCKVSGSGMKAFTRDLRTKFKGLDDIYVWHALCG  417 (865)
T ss_pred             cccccccccccccchhhhhhhhhhhhccccccccccccccccccccccccCcccHHHHHHHHHHhCCCCCEEEEeeeccC
Confidence                                       0                 01245567999999999999977999999999999


Q ss_pred             CCCCCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchh
Q 011675          340 YWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLL  418 (480)
Q Consensus       340 YWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l  418 (480)
                      |||||+|++   ++ ++++++|+.+||+.++|||+|+|++..+|+++++|++++.|||+||+||+++||||||||+|++|
T Consensus       418 YWGGV~P~~---~~y~~k~~~p~~spg~~~~~~d~a~d~i~~~G~glv~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~L  494 (865)
T PLN02982        418 AWGGVRPGT---THLNAKVVPARLSPGLDGTMNDLAVDKIVEGGIGLVHPSQAGDFYDSMHSYLASVGITGVKVDVIHTL  494 (865)
T ss_pred             cccCcCCCC---CCCcceEEecccCccccccCcchhhhheecCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhH
Confidence            999999996   45 89999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhccCCChhHHHHHHHHHHHHHHHhccCCCceEeecCCCCCcccc-cccceeeeccCCCC
Q 011675          419 EILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLL-GTEAIALGRVGMTS  479 (480)
Q Consensus       419 ~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~CMs~~~~~l~~-~~~s~~~~R~SDDF  479 (480)
                      ++|++++|||++|+++||+||++|+++||++|++|+||||+|+++|+ ++++++. |+||||
T Consensus       495 e~L~~~~ggRv~La~ay~~al~~Sv~r~F~~ng~I~CM~~~~~~~~~~tk~sav~-R~SDDF  555 (865)
T PLN02982        495 EYVCEEYGGRVELAKAYYDGLSESLAKNFNGTGIIASMQQCNDFFFLGTKQISMG-RVGDDF  555 (865)
T ss_pred             HHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCCcceee-eccccc
Confidence            99999999999999999999999999999999999999999999995 5677777 999999

>PLN02711 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PLN02219 probable galactinol--sucrose galactosyltransferase 2 Back     alignment and domain information
>PLN02684 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PLN02355 probable galactinol--sucrose galactosyltransferase 1 Back     alignment and domain information
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03231 putative alpha-galactosidase; Provisional Back     alignment and domain information
>PLN02229 alpha-galactosidase Back     alignment and domain information
>PLN02692 alpha-galactosidase Back     alignment and domain information
>PLN02808 alpha-galactosidase Back     alignment and domain information
>PLN02899 alpha-galactosidase Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query480
3cc1_A 433 BH1870 protein, putative alpha-N-acetylgalactosami 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1zy9_A 564 Alpha-galactosidase; TM1192, struc genomics, joint 5e-05
1szn_A 417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 9e-04
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433 Back     alignment and structure
 Score = 46.3 bits (109), Expect = 1e-05
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 8/78 (10%)

Query: 211 KTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPG--LVLIDDGWQSISHDED 268
            TPP      GW +WD +  +V    V+   + + +     G   +++D  W   + +  
Sbjct: 10  LTPP-----MGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWEYIVVDIQWYEPTANSS 64

Query: 269 PIDSEG-INRTAAGEQMP 285
             +    +     G  +P
Sbjct: 65  AYNPFAPLCMDEYGRLLP 82
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564 Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query480
3cc1_A 433 BH1870 protein, putative alpha-N-acetylgalactosami 99.94
1zy9_A 564 Alpha-galactosidase; TM1192, struc genomics, joint 99.94
4fnq_A 729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 99.93
3mi6_A 745 Alpha-galactosidase; NESG, structural genomics, PS 99.92
2xn2_A 732 Alpha-galactosidase; hydrolase, glycosidase; HET: 99.92
1uas_A 362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 99.9
2yfo_A 720 Alpha-galactosidase-sucrose kinase agask; hydrolas 99.89
1szn_A 417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 99.88
3a5v_A 397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 99.87
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 99.87
3lrk_A 479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 99.86
3hg3_A 404 Alpha-galactosidase A; glycoprotein, carbohydrate- 99.85
4do4_A 400 Alpha-N-acetylgalactosaminidase; pharmacological c 99.79
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 99.33
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 99.21
4ba0_A 817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 99.14
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 99.07
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 99.05
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 99.01
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 99.0
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 98.4
3a24_A 641 Alpha-galactosidase; glycoside hydrolase family 97 98.23
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 97.55
2d73_A 738 Alpha-glucosidase SUSB; glycoside hydrolase family 97.42
1m7x_A 617 1,4-alpha-glucan branching enzyme; alpha/beta barr 90.8
3k1d_A 722 1,4-alpha-glucan-branching enzyme; mycobacterium t 90.57
1ea9_C 583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 89.46
3zss_A 695 Putative glucanohydrolase PEP1A; alpha-glucan bios 83.06
3m07_A 618 Putative alpha amylase; IDP00968, csgid, structura 82.88
1gcy_A 527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 82.65
1j0h_A 588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 82.56
3edf_A 601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 80.37
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
Probab=99.94  E-value=1.4e-27  Score=251.39  Aligned_cols=219  Identities=17%  Similarity=0.186  Sum_probs=143.2

Q ss_pred             ccccccccccccccCHHHHHHHHHHH----HhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCccc-
Q 011675          219 KFGWCTWDAFYLTVQPHGVMEGVKGL----VDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQE-  293 (480)
Q Consensus       219 ~~GWCTWdafy~~vt~~~I~~~l~~L----~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~-  293 (480)
                      .+|||||++||+++||++|++.++.+    ++.|+.  +|+||||||..+.+...+...       ...-...+.+|.. 
T Consensus        13 p~gwnsW~~~~~~i~e~~i~~~ad~~~~gl~~~G~~--~~~iDDgW~~~~~~~~~y~~~-------~~~~~d~~G~~~~~   83 (433)
T 3cc1_A           13 PMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWE--YIVVDIQWYEPTANSSAYNPF-------APLCMDEYGRLLPA   83 (433)
T ss_dssp             CEEEESHHHHTTCCCHHHHHHHHHHHHHHTGGGTCC--EEEECSCTTCCCTTSTTCCTT-------SCSCBCTTSCBCCC
T ss_pred             CEEEEChhhhCCcCCHHHHHHHHHHHHhcchhhCCe--EEEECCCcCCCCCcccccccc-------cccccCCCCCEeEC
Confidence            47999999999999999999999999    666665  999999999975432100000       0000123667775 


Q ss_pred             CCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcc---cccCCCCCCccccc
Q 011675          294 NFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTT---VVKPKLSPGLELTM  370 (480)
Q Consensus       294 n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~---l~~p~~spg~~~~~  370 (480)
                      ++|||+..        .+.||++++++||++ | || +|||+.+.-.+..+.|+++....+..   +..|..        
T Consensus        84 ~~kFP~~~--------~~~Gl~~l~~~ih~~-G-lk-~Giw~~p~i~~~~v~~~s~~~~~~~~~~di~~~~~--------  144 (433)
T 3cc1_A           84 TNRFPSAK--------NGAGFKPLSDAIHDL-G-LK-FGIHIMRGIPRQAVYENSPVLGSTKTAREIAHTNS--------  144 (433)
T ss_dssp             TTTCGGGT--------TTTTTHHHHHHHHHT-T-CE-EEEEEESSEEHHHHHHTCBCTTSSCBHHHHEETTC--------
T ss_pred             CccCCCcc--------cCCCHHHHHHHHHHc-C-Ce-eEEEeCCCCchhccCCCCccccccceecccccCCc--------
Confidence            48999421        123999999999996 8 99 99996542101112333321111100   000100        


Q ss_pred             ccccccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHHHHHhccCCC
Q 011675          371 EDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGN  450 (480)
Q Consensus       371 pd~a~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~  450 (480)
                      .+ .+.. ...++++.+|+ ++.||+.++++|++|||||||+|+++. ..+. ++  ..+..++|++||+++      ++
T Consensus       145 ~~-~~~~-~~~~lD~~~p~-~~~~~~~~~~~l~~~GvDyvK~D~~~~-~~~~-~~--~~~~~~~~~~aL~~~------gr  211 (433)
T 3cc1_A          145 IC-PWNT-DMYGVDPTKEG-AQSYYNSLFELYAQWGVDFVKVDDIAA-SRLY-DT--HLEEIKMIQRAIQAC------GR  211 (433)
T ss_dssp             CB-TTBT-TEEEECTTSTT-HHHHHHHHHHHHHHTTCCEEEEESCSC-TTSS-CC--CHHHHHHHHHHHHHS------SS
T ss_pred             cc-CCCC-CceeecCCCHH-HHHHHHHHHHHHHHcCCCEEEeCCccc-ccCC-cc--cHHHHHHHHHHHHhc------CC
Confidence            00 0000 01246888886 889999999999999999999999876 2232 22  356677888888754      77


Q ss_pred             ceEeecCCCCCc----ccccccceeeeccCCCC
Q 011675          451 GVIASMEHCNDF----MLLGTEAIALGRVGMTS  479 (480)
Q Consensus       451 ~iI~CMs~~~~~----l~~~~~s~~~~R~SDDF  479 (480)
                      .|+.|||+++..    .+..+.++++ |+|||+
T Consensus       212 ~i~~slc~g~~~~~~~~~~~~~~n~w-R~s~D~  243 (433)
T 3cc1_A          212 PMVLSLSPGPAPIKYAHHFKTNANMW-RITDDF  243 (433)
T ss_dssp             CCEEECCCSBSSEESCSSSCCTTGGG-CCEECC
T ss_pred             CEEEEecCCCCChhhhhhhhhhCcEE-EeccCc
Confidence            899999986322    2345778999 999998
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Back     alignment and structure
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Back     alignment and structure
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 480
d1szna2314 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T 1e-06
d1zy9a2 348 c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata 3e-06
d1uasa2273 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [ 3e-06
d1ktba2293 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu 1e-04
d1r46a2292 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) 2e-04
d1rr7a_94 a.4.1.14 (A:) Middle operon regulator, Mor {Bacter 0.002
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

 Score = 48.0 bits (113), Expect = 1e-06
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 8/61 (13%)

Query: 211 KTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPG---LVLIDDGWQSISHDE 267
           K P       GW +W+A++  +     +   + +V  G        V IDD W       
Sbjct: 10  KVPS-----LGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRV 64

Query: 268 D 268
           D
Sbjct: 65  D 65
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 Back     information, alignment and structure
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273 Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293 Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292 Back     information, alignment and structure
>d1rr7a_ a.4.1.14 (A:) Middle operon regulator, Mor {Bacteriophage Mu [TaxId: 10677]} Length = 94 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query480
d1szna2314 Melibiase {Trichoderma reesei [TaxId: 51453]} 99.93
d1uasa2273 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 99.91
d1zy9a2 348 Alpha-galactosidase GalA catalytic domain {Thermot 99.9
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 99.88
d1ktba2293 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 99.82
d2f2ha4 338 Putative glucosidase YicI, domain 2 {Escherichia c 99.22
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 92.74
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 90.54
d1j0ha3 382 Neopullulanase, central domain {Bacillus stearothe 87.51
d2aaaa2 381 Fungal alpha-amylases {Aspergillus niger, acid amy 87.36
d2guya2 381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 86.55
d1g5aa2 554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 86.49
d1eh9a3 400 Glycosyltrehalose trehalohydrolase, central domain 85.1
d1ea9c3 382 Maltogenic amylase, central domain {Bacillus sp., 85.0
d1wzla3 382 Maltogenic amylase, central domain {Thermoactinomy 83.18
d1h3ga3 422 Cyclomaltodextrinase, central domain {Flavobacteri 82.33
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 81.81
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

Probab=99.93  E-value=1.5e-27  Score=234.91  Aligned_cols=204  Identities=13%  Similarity=0.158  Sum_probs=145.2

Q ss_pred             cccccccccccccCHHHHHHHHHHHHhCCC---CCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCccc-CC
Q 011675          220 FGWCTWDAFYLTVQPHGVMEGVKGLVDGGC---PPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQE-NF  295 (480)
Q Consensus       220 ~GWCTWdafy~~vt~~~I~~~l~~L~~~G~---~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~-n~  295 (480)
                      ||||||++||+++||+.|++.++.|++.|+   ++++++||||||...++.                    +.+|.. ++
T Consensus        14 ~GwnSW~~~~~~i~e~~i~~~a~~l~e~gl~~~G~~~~~iDdGW~~~~~~~--------------------~G~~~~d~~   73 (314)
T d1szna2          14 LGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRV--------------------DGHIAPNAT   73 (314)
T ss_dssp             EEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCB--------------------TTBCCBCTT
T ss_pred             CcccchhhhcccCCHHHHHHHHHHHHHcCccccCcEEEEECCCccCCCCCC--------------------CCCeeeCHh
Confidence            799999999999999999999999988775   357999999999875431                    345664 58


Q ss_pred             CCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccc
Q 011675          296 KFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAV  375 (480)
Q Consensus       296 KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a~  375 (480)
                      |||             +||++++++||++ | +| +|+|+++.++|....|+....+. ..                .. 
T Consensus        74 kFP-------------~Gl~~~~~~i~~~-G-~k-~Giw~~p~~~~~~~~p~~~~~~~-~~----------------~~-  119 (314)
T d1szna2          74 RFP-------------DGIDGLAKKVHAL-G-LK-LGIYSTAGTATCAGYPASLGYED-VD----------------AA-  119 (314)
T ss_dssp             TCT-------------THHHHHHHHHHHT-T-CE-EEEEEESSSBCTTSCBCCTTCHH-HH----------------HH-
T ss_pred             hcC-------------CchHHHHHHHHhc-C-Ce-EEEeecccccccCCCcccccccc-cc----------------hh-
Confidence            999             5999999999995 8 98 99999999888877776522111 00                00 


Q ss_pred             cceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhc------cCCChhHHHHHHHHHHHHHHHhccCC
Q 011675          376 DKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCE------NYGGRVDLAKAYYKALTASVRKHFKG  449 (480)
Q Consensus       376 ~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~------~~ggrv~l~~ay~~AL~~s~~~~F~~  449 (480)
                       .....|+++++| ++..+++.++..++++|||++|+|.+........      ++.........++.++.+++++.+++
T Consensus       120 -~~~~~~~d~~~~-d~~~~~~~~~~~~~~~g~d~~K~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  197 (314)
T d1szna2         120 -DFADWGVDYLKY-DNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHE  197 (314)
T ss_dssp             -HHHHTTCCEEEE-ECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTTTCTTBCCTTCCGGGSHHHHHHHHHHHHHHTSSSC
T ss_pred             -hhhhcCCccccc-hHHHHHHHHHHHHHHhCCceEEecccccchhccCcccCccccCcchhhHHHHHHHHHHHHHHhCCC
Confidence             001123444444 3456777788888999999999999865433221      11111222333444566788888888


Q ss_pred             CceEeecCCCCCcc-cccccceeeeccCCCCC
Q 011675          450 NGVIASMEHCNDFM-LLGTEAIALGRVGMTSN  480 (480)
Q Consensus       450 ~~iI~CMs~~~~~l-~~~~~s~~~~R~SDDF~  480 (480)
                      ..+..||++..... +....+.++ |+|+|+.
T Consensus       198 ~~i~~c~~~~~~~~~~~~~~~~~~-R~s~D~~  228 (314)
T d1szna2         198 IVLSMCIWGQADVFSWGNSTGISW-RMSDDIS  228 (314)
T ss_dssp             CEEEECCTTGGGHHHHGGGTCSEE-ECSSCCC
T ss_pred             eEEEecCCCCCCchhhhhhcccce-eecCCcc
Confidence            88999999886543 334567788 9999973
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure