Citrus Sinensis ID: 011679
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 479 | 2.2.26 [Sep-21-2011] | |||||||
| Q949Y3 | 475 | Bifunctional purple acid | yes | no | 0.989 | 0.997 | 0.796 | 0.0 | |
| Q93WP4 | 481 | Phosphoenolpyruvate phosp | N/A | no | 0.933 | 0.929 | 0.742 | 0.0 | |
| Q38924 | 469 | Fe(3+)-Zn(2+) purple acid | no | no | 0.937 | 0.957 | 0.602 | 1e-157 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.920 | 0.948 | 0.594 | 1e-157 | |
| Q9SE00 | 473 | Purple acid phosphatase 1 | N/A | no | 0.945 | 0.957 | 0.579 | 1e-156 | |
| Q09131 | 464 | Purple acid phosphatase O | no | no | 0.899 | 0.928 | 0.608 | 1e-153 | |
| Q9SIV9 | 468 | Purple acid phosphatase 1 | no | no | 0.926 | 0.948 | 0.574 | 1e-150 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.914 | 0.939 | 0.564 | 1e-145 | |
| O23244 | 466 | Purple acid phosphatase 2 | no | no | 0.929 | 0.954 | 0.564 | 1e-144 | |
| P80366 | 432 | Fe(3+)-Zn(2+) purple acid | N/A | no | 0.883 | 0.979 | 0.575 | 1e-143 |
| >sp|Q949Y3|PPA26_ARATH Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/476 (79%), Positives = 421/476 (88%), Gaps = 2/476 (0%)
Query: 4 MRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVH 63
M L+ +++ + VLL + G +GITS FIR+EWP++DIPLD+ F VPKG+N+PQQVH
Sbjct: 1 MNHLVIISVFLSSVLL--LYRGESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVH 58
Query: 64 ITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCL 123
ITQGDYDGKAVIISWVTP EPG S V YG K++F A+GT +NYTFYKYKSG+IH CL
Sbjct: 59 ITQGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCL 118
Query: 124 VDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME 183
V LE+DTKYYYKI SG+SSREFWF TPP + PDASYKFGIIGD+GQT+NSLSTLEHYME
Sbjct: 119 VSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYME 178
Query: 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
SGAQ VLFLGDLSYADRYQ+ DVGVRWDSWGRFVERS AYQPW+WSAGNHE++YM YMGE
Sbjct: 179 SGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGE 238
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
V PF++YL RY TP+LASKSSSPLWYA+RRASAHIIVLSSYSPFVKYTPQW WL EEL +
Sbjct: 239 VTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTR 298
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYR 363
VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE WFV++KVDV+FAGHVHAYERSYR
Sbjct: 299 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYR 358
Query: 364 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 423
ISN+ YN+SSGD +PVPDKSAPVYITVGDGGNQEGLAG+F PQPDYSAFREASYGHSTL
Sbjct: 359 ISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTL 418
Query: 424 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVGGLFA 479
+IKNRTHA YHWNRNDDGKKVATD F+LHNQYW N RRRKL KHY+RSVVGG A
Sbjct: 419 DIKNRTHAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIRSVVGGWIA 474
|
Metallo-phosphoesterase involved in phosphate metabolism. Acid phosphatase activity with phosphoenolpyruvate, inorganic pyrophosphate, phenyl-phosphate and p-nitrophenyl-phosphate as the most effective substrates. No activity with phytic acid, phosphocholine or bis-p-nitrophenyl-phosphate. Has a peroxidase activity at alkaline pH. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7 |
| >sp|Q93WP4|PEPP_ALLCE Phosphoenolpyruvate phosphatase OS=Allium cepa GN=ACPEPP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/454 (74%), Positives = 382/454 (84%), Gaps = 7/454 (1%)
Query: 6 LLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHIT 65
LL H I+LL V+ TS F+R+E+P++DIP+D++ FAVPK SPQQVHIT
Sbjct: 13 LLFH------IILLCSVDKTLCRQTSSFVRSEFPAVDIPIDSKEFAVPKNQFSPQQVHIT 66
Query: 66 QGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVD 125
QGDYDGKAVI+SWVT +PG S V YGTS + +D +A+G NYT+Y Y SGYIH CL+D
Sbjct: 67 QGDYDGKAVIVSWVTFIDPGKSEVVYGTSPNSYDHSAQGKTTNYTYYDYTSGYIHHCLLD 126
Query: 126 GLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG 185
LEYDTKYYYKIG GD++REFWF TPP+I PDASY FGIIGDLGQTYNSLSTLEHYM+S
Sbjct: 127 KLEYDTKYYYKIGKGDAAREFWFHTPPQIHPDASYTFGIIGDLGQTYNSLSTLEHYMKSK 186
Query: 186 AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVV 245
QTVLF+GDLSYADRY + G RWDSWGRFVERS AYQPWIW+ GNHEIEY +GEV
Sbjct: 187 GQTVLFVGDLSYADRYS-CNNGTRWDSWGRFVERSVAYQPWIWTVGNHEIEYRPDLGEVF 245
Query: 246 PFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVD 305
PF++YL+RYPTPHLAS SSSPLWY+IRRASAHIIVLSSYSPFVKYTPQW WL EEL +VD
Sbjct: 246 PFRAYLNRYPTPHLASASSSPLWYSIRRASAHIIVLSSYSPFVKYTPQWLWLSEELTRVD 305
Query: 306 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRIS 365
REKTPWLIVLMH P+YNSNEAH+MEGESMR AFESWFV+YKVD+VFAGHVHAYERSYRIS
Sbjct: 306 REKTPWLIVLMHAPLYNSNEAHYMEGESMRVAFESWFVQYKVDLVFAGHVHAYERSYRIS 365
Query: 366 NLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEI 425
N+ YNI+SG+ +P+PDKSAPVYITVGDGGNQEGLA +F QPDYSAFRE+SYGHSTLE+
Sbjct: 366 NIVYNITSGNRYPIPDKSAPVYITVGDGGNQEGLAERFSESQPDYSAFRESSYGHSTLEL 425
Query: 426 KNRTHAFYHWNRNDDGKKVATDSFILHNQYWASN 459
+NRTHAFY WNRNDDGK + D I NQYWASN
Sbjct: 426 RNRTHAFYQWNRNDDGKHIPVDRIIFRNQYWASN 459
|
Phosphoenolpyruvate phosphatase that probably operates in the vacuole to release phosphate from phosphoenolpyruvate (PEP) under phosphorus starvation. Allium cepa (taxid: 4679) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 6 EC: 0 |
| >sp|Q38924|PPA12_ARATH Fe(3+)-Zn(2+) purple acid phosphatase 12 OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 556 bits (1434), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/453 (60%), Positives = 337/453 (74%), Gaps = 4/453 (0%)
Query: 12 LTTAIVLLSD-VNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYD 70
++ I LLS V G TS+++R D+PLD++ F VP G NSPQQVH+TQG+++
Sbjct: 12 VSLIIFLLSVLVEFCYGGFTSEYVRGSDLPDDMPLDSDVFEVPPGPNSPQQVHVTQGNHE 71
Query: 71 GKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130
G VIISWVTP +PG TV Y +K AE TVN Y F+ Y SGYIH CL+D LE+D
Sbjct: 72 GNGVIISWVTPVKPGSKTVQYWCENEKSRKQAEATVNTYRFFNYTSGYIHHCLIDDLEFD 131
Query: 131 TKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHY-MESG-AQT 188
TKYYY+IGSG SR FWF PPK PD Y FG+IGDLGQTY+S STL HY M G Q
Sbjct: 132 TKYYYEIGSGKWSRRFWFFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQA 191
Query: 189 VLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFK 248
VLF+GDLSYADRY D RWD+WGRFVERS AYQPWIW+AGNHEI+++ +GE+ PFK
Sbjct: 192 VLFVGDLSYADRYPNHDNN-RWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFK 250
Query: 249 SYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREK 308
+++RY TPH AS S SPLWY+I+RASA+IIV+S YS + YTPQ++WL +EL+ V+R +
Sbjct: 251 PFMNRYHTPHKASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTE 310
Query: 309 TPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLH 368
TPWLIVL+H P Y+S H+MEGE++R +E WFV+YKVDVVFAGHVHAYERS R+SN+
Sbjct: 311 TPWLIVLVHSPFYSSYVHHYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERSERVSNIA 370
Query: 369 YNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNR 428
YNI +G C P+ D+SAP+YIT+GDGGN EGL PQP YSAFREAS+GH LEIKNR
Sbjct: 371 YNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNR 430
Query: 429 THAFYHWNRNDDGKKVATDSFILHNQYWASNRR 461
THA++ WNRN DG VA DS L N++W + ++
Sbjct: 431 THAYFSWNRNQDGNAVAADSVWLLNRFWRAQKK 463
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 555 bits (1431), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/444 (59%), Positives = 333/444 (75%), Gaps = 3/444 (0%)
Query: 15 AIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAV 74
A+VL + +N AGITS FIR ++D+PLD++ F VP G+N+PQQVHITQGD+ GKA+
Sbjct: 12 AVVLAAVMNAAIAGITSSFIRKVEKTVDMPLDSDVFRVPPGYNAPQQVHITQGDHVGKAM 71
Query: 75 IISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134
I+SWVT EPG S V Y + + A G + YT++ Y SGYIH C + LEY+TKYY
Sbjct: 72 IVSWVTVDEPGSSKVVYWSENSQHKKVARGNIRTYTYFNYTSGYIHHCTIRNLEYNTKYY 131
Query: 135 YKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFL 192
Y++G G+++R FWF TPP++ PD Y FG+IGDLGQ+++S TL HY + Q VLF+
Sbjct: 132 YEVGIGNTTRSFWFTTPPEVGPDVPYTFGLIGDLGQSFDSNRTLTHYERNPIKGQAVLFV 191
Query: 193 GDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLH 252
GDLSYAD Y D VRWD+WGRFVERS AYQPWIW+AGNHEI++ +GE PFK +
Sbjct: 192 GDLSYADNYPNHD-NVRWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPFTK 250
Query: 253 RYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWL 312
RY P+ AS S+ WY I+RASA+IIVLSSYS + KYTPQ++WL EEL KV+R +TPWL
Sbjct: 251 RYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETPWL 310
Query: 313 IVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNIS 372
IVLMH P YNS H+MEGE+MR +E WFV++KVD+VFAGHVHAYERS R+SN+ Y+I
Sbjct: 311 IVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERVSNVAYDIV 370
Query: 373 SGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAF 432
+G C PV D+SAPVYIT+GDGGN EGLA PQP+YSAFREAS+GH+TL+IKNRTHA+
Sbjct: 371 NGKCTPVRDQSAPVYITIGDGGNLEGLATNMTDPQPEYSAFREASFGHATLDIKNRTHAY 430
Query: 433 YHWNRNDDGKKVATDSFILHNQYW 456
Y W+RN DG V DS + N++W
Sbjct: 431 YSWHRNQDGYAVEADSMWVSNRFW 454
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SE00|PPAF1_IPOBA Purple acid phosphatase 1 OS=Ipomoea batatas GN=PAP1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 550 bits (1418), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/466 (57%), Positives = 342/466 (73%), Gaps = 13/466 (2%)
Query: 4 MRLLLHLALTTAIV--LLSDVNGGSAGITSKFIRTEWPS------IDIPLDNEAFAVPKG 55
MRL++ + L I+ +L+ AG+TS ++R + +D+P D++ FAVP G
Sbjct: 1 MRLVV-VGLWCLILGLILNPTKFCDAGVTSSYVRKSLSALPNAEDVDMPWDSDVFAVPSG 59
Query: 56 HNSPQQVHITQGDYDGKAVIISWVTPHE-PGPSTVSYGTSADKFDFTAEGTVNNYTFYKY 114
+N+PQQVHITQGDY+G+ VIISW TP++ G + V Y + K A GTV Y +Y Y
Sbjct: 60 YNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVVYWSENSKSQKRAMGTVVTYKYYNY 119
Query: 115 KSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNS 174
S +IH C + LEYDTKYYY++G GD+ R+FWF TPPK PD Y FG+IGD+GQT++S
Sbjct: 120 TSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDS 179
Query: 175 LSTLEHYMESGA--QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232
+TL HY ++ A Q VLF+GDLSY++R+ D RWD+WGRF ERS AYQPWIW+AGN
Sbjct: 180 NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNN-RWDTWGRFSERSVAYQPWIWTAGN 238
Query: 233 HEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTP 292
HEI+Y +GE PF + +RYPTPH AS S PLWYAI+RASAHIIVLSSYS FVKY+P
Sbjct: 239 HEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSP 298
Query: 293 QWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFA 352
Q++W EL+KV+R +TPWLIVL+H P+YNS EAH+MEGE+MRA FE +FV YKVD+VF+
Sbjct: 299 QYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFS 358
Query: 353 GHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSA 412
GHVH+YERS R+SN+ YNI + C PV D+SAPVYIT+GDGGN EGLA + PQP YSA
Sbjct: 359 GHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSA 418
Query: 413 FREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWAS 458
FREAS+GH +IKNRTHA + W+RN DG V DS L N+YWAS
Sbjct: 419 FREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRYWAS 464
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q09131|PPAF_SOYBN Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2 | Back alignment and function description |
|---|
Score = 542 bits (1396), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/437 (60%), Positives = 322/437 (73%), Gaps = 6/437 (1%)
Query: 22 VNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTP 81
NGGS+ S FIR ++D+PLD++ FAVP G+N+PQQVHITQGD GKAVI+SWVT
Sbjct: 20 CNGGSS---SPFIRKVEKTVDMPLDSDVFAVPPGYNAPQQVHITQGDLVGKAVIVSWVTV 76
Query: 82 HEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGD 141
EPG S V Y + AEG + Y F+ Y SG+IH + LEY TKYYY++G G+
Sbjct: 77 DEPGSSEVHYWSENSDKKKIAEGKLVTYRFFNYSSGFIHHTTIRNLEYKTKYYYEVGLGN 136
Query: 142 SSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYAD 199
++R+FWF TPP+I PD Y FG+IGDLGQ+++S TL HY + QTVLF+GDLSYAD
Sbjct: 137 TTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYAD 196
Query: 200 RYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHL 259
Y D +RWDSWGRF ERS AYQPWIW+AGNHE + +GE VPFK Y HRY P+
Sbjct: 197 NYPNHD-NIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHVPYK 255
Query: 260 ASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVP 319
AS+S+SP WY+I+RASAHIIVL+SYS + KYTPQ++WL +EL KV+R +TPWLIVLMH P
Sbjct: 256 ASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSP 315
Query: 320 IYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPV 379
YNS H+MEGE+MR +E WFV+YKVDVVFAGHVHAYERS R+SN+ YNI +G C PV
Sbjct: 316 WYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPV 375
Query: 380 PDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRND 439
DKSAPVYIT+GDGG EGLA PQP YSAFREAS+GH+ +I NRTHA Y W+RN
Sbjct: 376 NDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQ 435
Query: 440 DGKKVATDSFILHNQYW 456
DG V DS N+YW
Sbjct: 436 DGVAVEADSLWSFNRYW 452
|
Glycine max (taxid: 3847) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 532 bits (1371), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/449 (57%), Positives = 321/449 (71%), Gaps = 5/449 (1%)
Query: 10 LALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDY 69
+ L VL S + G GITS+++R ++D+PLD++ F VP G+N+PQQVHITQGD
Sbjct: 12 IVLVLCCVLNSLLCNG--GITSRYVRKLEATVDMPLDSDVFRVPCGYNAPQQVHITQGDV 69
Query: 70 DGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129
+GKAVI+SWVT G + V Y A G N Y FY Y SG+IH C + LEY
Sbjct: 70 EGKAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHHCPIRNLEY 129
Query: 130 DTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME--SGAQ 187
DTKYYY +G G + R+FWF TPP+I PD Y FG+IGDLGQ+Y+S TL HY + Q
Sbjct: 130 DTKYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQ 189
Query: 188 TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPF 247
VLF+GD+SYAD Y D RWDSWGRF ERS AYQPWIW+ GNHE+++ +GE PF
Sbjct: 190 AVLFVGDISYADTYPDHD-NRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPF 248
Query: 248 KSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDRE 307
K + HRY TP+ +S S+ P WY+I+R A+IIVL+SYS + KYTPQ++WL EE KV+R
Sbjct: 249 KPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRT 308
Query: 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNL 367
+TPWLIVLMH P YNS + H+MEGE+MR +E+WFV+YKVDVVFAGHVHAYERS R+SN+
Sbjct: 309 ETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNI 368
Query: 368 HYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKN 427
YN+ +G C PV D+SAPVYIT+GDGGN EGLA K PQP YSAFREAS+GH+ IKN
Sbjct: 369 AYNVVNGICTPVKDQSAPVYITIGDGGNIEGLATKMTEPQPKYSAFREASFGHAIFSIKN 428
Query: 428 RTHAFYHWNRNDDGKKVATDSFILHNQYW 456
RTHA Y W+RN DG V D +N++W
Sbjct: 429 RTHAHYGWHRNHDGYAVEGDRMWFYNRFW 457
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 514 bits (1324), Expect = e-145, Method: Compositional matrix adjust.
Identities = 258/457 (56%), Positives = 329/457 (71%), Gaps = 19/457 (4%)
Query: 7 LLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQ 66
L L++TT I + GITSKF+R PSI++ LD F P G+N+P+QVH+TQ
Sbjct: 9 FLFLSITTVI---------NGGITSKFVRQALPSIEMSLD--TFPSPGGYNTPEQVHLTQ 57
Query: 67 GDYDGKAVIISWVTP-HEPGPSTVSYGTSADKFDFT-----AEGTVNNYTFYKYKSGYIH 120
GD+DG+ +I+SWVTP + G + V+Y + + D A + +Y FY Y SG++H
Sbjct: 58 GDHDGRGMIVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLH 117
Query: 121 QCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEH 180
+ GLEYDTKY Y++G+ S R+F F TPPKI PD Y FGIIGDLGQTY S TL H
Sbjct: 118 HATIKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYH 177
Query: 181 YMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMT 239
YM + Q VLF GDLSYAD + D +WD+WGRF+E AAYQP+I++AGNHEI+++
Sbjct: 178 YMSNPKGQAVLFAGDLSYADDHPNHD-QRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVP 236
Query: 240 YMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLRE 299
+GE FK Y HRYP + AS+S+SPLWY++RRASAHIIVLSSYS + KYTPQ+ WL +
Sbjct: 237 NIGEPHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQ 296
Query: 300 ELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYE 359
ELK V+RE+TPWLIV++H P YNSN H+MEGESMR FESW V KVD+V +GHVHAYE
Sbjct: 297 ELKNVNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYE 356
Query: 360 RSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYG 419
RS RISN+ YNI++G PV D +AP+YIT+GDGGN EG+A F PQP YSA+REAS+G
Sbjct: 357 RSERISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVDPQPSYSAYREASFG 416
Query: 420 HSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYW 456
H+ LEI NRTHA Y W+RN D + VA DS +LHN+++
Sbjct: 417 HAVLEIMNRTHAQYTWHRNQDNEPVAADSIMLHNRHF 453
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/462 (56%), Positives = 333/462 (72%), Gaps = 17/462 (3%)
Query: 1 MEKMRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQ 60
M K+ LL+ + L+ A V+ ++G TS F+RT PS ++ L E F P GHN+P+
Sbjct: 3 MNKI-LLVFVFLSIATVI-------NSGTTSNFVRTAQPSTEMSL--ETFPSPAGHNAPE 52
Query: 61 QVHITQGDYDGKAVIISWVTP-HEPGPSTVSYGTSAD----KFDFTAEGTVNNYTFYKYK 115
QVHI QGDY+G+ +IISWVTP + G + V+Y + D + ++Y FY Y
Sbjct: 53 QVHIVQGDYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYT 112
Query: 116 SGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSL 175
SG++H + GLEYDTKY Y++G+ S R+F F +PPK+ PD Y FGIIGDLGQT S
Sbjct: 113 SGFLHHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASN 172
Query: 176 STLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHE 234
TL HYM + Q VLF GDLSYAD + D +WDSWGRFVE AAYQ +I++AGNHE
Sbjct: 173 ETLYHYMSNPKGQAVLFPGDLSYADDHPNHD-QRKWDSWGRFVEPCAAYQTFIYAAGNHE 231
Query: 235 IEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQW 294
I+++ +GE FK Y+HRY + ASKS SPLWY+IRRASAHIIVLSSYS + KYTPQ+
Sbjct: 232 IDFVPNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQY 291
Query: 295 EWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGH 354
WL +ELKKV+RE+TPWLIV++H P YNSN H+MEGESMRA FESWFV KVD+V +GH
Sbjct: 292 VWLEQELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGH 351
Query: 355 VHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFR 414
VH+YERS R+SN+ YNI++G +PV D SAP+YIT+GDGGN EG+A F PQP YSA+R
Sbjct: 352 VHSYERSERVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYR 411
Query: 415 EASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYW 456
EAS+GH+ LEI NRTHA+Y W+RN D + VA DS +LHN+Y+
Sbjct: 412 EASFGHAVLEIYNRTHAYYTWHRNQDNEPVAADSIMLHNRYF 453
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|P80366|PPAF_PHAVU Fe(3+)-Zn(2+) purple acid phosphatase OS=Phaseolus vulgaris PE=1 SV=2 | Back alignment and function description |
|---|
Score = 507 bits (1306), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/426 (57%), Positives = 311/426 (73%), Gaps = 3/426 (0%)
Query: 33 FIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYG 92
F+R + D+PLD++ F VP G+N+PQQVHITQGD G+A+IISWVT EPG S V Y
Sbjct: 1 FVRKTNKNRDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYW 60
Query: 93 TSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPP 152
+ + A+G ++ Y F+ Y SG+IH + L+Y+TKYYY++G +++R F F TPP
Sbjct: 61 SEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 120
Query: 153 KIDPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRW 210
+ D Y FG+IGDLGQ+++S +TL HY S QTVLF+GDLSYADRY D VRW
Sbjct: 121 QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRW 179
Query: 211 DSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYA 270
D+WGRF ERS AYQPWIW+AGNHEIE+ + E PFK + +RY P+ AS+S+SP WY+
Sbjct: 180 DTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYS 239
Query: 271 IRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFME 330
I+RASAHIIVLSS+ + + TPQ+ WL++EL+KV R +TPWLIVLMH P+YNS HFME
Sbjct: 240 IKRASAHIIVLSSHIAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFME 299
Query: 331 GESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITV 390
GE+MR FE+WFV+YKVDVVFAGHVHAYERS R+SN+ Y I+ G C PV D+SAPVYIT+
Sbjct: 300 GEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITDGLCTPVKDQSAPVYITI 359
Query: 391 GDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFI 450
GD GN + PQP+YSAFREAS+GH +IKNRTHA + WNRN DG V DS
Sbjct: 360 GDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVW 419
Query: 451 LHNQYW 456
N++W
Sbjct: 420 FFNRHW 425
|
Phaseolus vulgaris (taxid: 3885) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 479 | ||||||
| 224120334 | 483 | predicted protein [Populus trichocarpa] | 0.989 | 0.981 | 0.835 | 0.0 | |
| 255579857 | 488 | Iron(III)-zinc(II) purple acid phosphata | 0.983 | 0.965 | 0.811 | 0.0 | |
| 224142549 | 475 | predicted protein [Populus trichocarpa] | 0.981 | 0.989 | 0.823 | 0.0 | |
| 15242870 | 475 | purple acid phosphatase 26 [Arabidopsis | 0.989 | 0.997 | 0.796 | 0.0 | |
| 225446227 | 487 | PREDICTED: bifunctional purple acid phos | 0.964 | 0.948 | 0.816 | 0.0 | |
| 297805048 | 475 | ATPAP26/PAP26 [Arabidopsis lyrata subsp. | 0.977 | 0.985 | 0.801 | 0.0 | |
| 357601492 | 476 | PAP26 [Gossypium hirsutum] | 0.981 | 0.987 | 0.793 | 0.0 | |
| 56788343 | 475 | putative purple acid phosphatase [Arabid | 0.989 | 0.997 | 0.794 | 0.0 | |
| 296084523 | 462 | unnamed protein product [Vitis vinifera] | 0.954 | 0.989 | 0.820 | 0.0 | |
| 21464654 | 477 | acid phosphatase [Lupinus luteus] | 0.983 | 0.987 | 0.777 | 0.0 |
| >gi|224120334|ref|XP_002331022.1| predicted protein [Populus trichocarpa] gi|222872952|gb|EEF10083.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/475 (83%), Positives = 432/475 (90%), Gaps = 1/475 (0%)
Query: 1 MEKMRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQ 60
+E +LL L L ++ L V G+AGITS FIR+EWPSIDIPLDNE FAVPKG+N+PQ
Sbjct: 5 VETQSMLLQLILVF-VIFLGFVKNGNAGITSAFIRSEWPSIDIPLDNEVFAVPKGYNAPQ 63
Query: 61 QVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIH 120
QVHITQGDY+GKAVIISWVTP EPG + V YG S K+DFTAEGTV NYTFY YKSGYIH
Sbjct: 64 QVHITQGDYNGKAVIISWVTPDEPGTNKVQYGVSKKKYDFTAEGTVKNYTFYNYKSGYIH 123
Query: 121 QCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEH 180
QCLVDGLEY+TKYYYKIGSGDSSREFWFQTPPKI+PD YKFGIIGDLGQTYNSLSTLEH
Sbjct: 124 QCLVDGLEYETKYYYKIGSGDSSREFWFQTPPKINPDTPYKFGIIGDLGQTYNSLSTLEH 183
Query: 181 YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTY 240
YM+SGAQ VLF+GDL+YADRY++ DVG+RWDSWGRFVERSAAYQPW+WSAGNHEIEYM Y
Sbjct: 184 YMQSGAQAVLFVGDLAYADRYKYNDVGIRWDSWGRFVERSAAYQPWMWSAGNHEIEYMPY 243
Query: 241 MGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREE 300
MGEV+PFKSYL+RYPTPHLASKSSSP WYAIRRASAHIIVLSSYS FVKYTPQWEWLREE
Sbjct: 244 MGEVIPFKSYLNRYPTPHLASKSSSPFWYAIRRASAHIIVLSSYSSFVKYTPQWEWLREE 303
Query: 301 LKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYER 360
LK+VDREKTPWLIVLMH+PIYNSNEAHFMEGESMRA FE WFVRYKVDVVFAGHVHAYER
Sbjct: 304 LKRVDREKTPWLIVLMHIPIYNSNEAHFMEGESMRAVFEKWFVRYKVDVVFAGHVHAYER 363
Query: 361 SYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGH 420
SYR+SN+HYN+SSGD FP D+SAPVYITVGDGGNQEGLAG+FR PQPDYSAFREASYGH
Sbjct: 364 SYRVSNIHYNVSSGDRFPAADESAPVYITVGDGGNQEGLAGRFRDPQPDYSAFREASYGH 423
Query: 421 STLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVG 475
STLEIKNRTHA YHWNRNDDGKKV TD+F+LHNQYW N RR+KL +H+LR+VVG
Sbjct: 424 STLEIKNRTHAIYHWNRNDDGKKVPTDAFVLHNQYWGRNLRRKKLKQHHLRTVVG 478
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255579857|ref|XP_002530765.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] gi|223529681|gb|EEF31625.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/471 (81%), Positives = 424/471 (90%)
Query: 5 RLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHI 64
+++ ++ + VLL VN +AGITS FIR+EWPSIDIPLDNE FAVPKG+N+PQQVHI
Sbjct: 6 KMMQYMLILAFFVLLDFVNNANAGITSSFIRSEWPSIDIPLDNEVFAVPKGYNAPQQVHI 65
Query: 65 TQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLV 124
TQGDY+GKAVIISWVTP EPG S V YG S +K+DF AEGT NYTFY+YKSGYIHQCL+
Sbjct: 66 TQGDYNGKAVIISWVTPDEPGSSKVQYGVSENKYDFIAEGTARNYTFYQYKSGYIHQCLI 125
Query: 125 DGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMES 184
D LEYDTKYYYKIG GDSSREF+FQTPP I+PD YKFGIIGDLGQTYNSLSTLEH+++S
Sbjct: 126 DDLEYDTKYYYKIGDGDSSREFYFQTPPIINPDTPYKFGIIGDLGQTYNSLSTLEHFIQS 185
Query: 185 GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEV 244
AQ VLF+GDLSYADRYQ+ DVG+RWDSWGRFVE+S AY PW+WSAGNHEIEYM YMGEV
Sbjct: 186 KAQAVLFVGDLSYADRYQYNDVGIRWDSWGRFVEKSTAYLPWLWSAGNHEIEYMPYMGEV 245
Query: 245 VPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKV 304
PFKSYLHRYPTPHLASKSSSPLWYAIR ASAHIIVLSSYSPFVKYTPQWEWL +ELK V
Sbjct: 246 TPFKSYLHRYPTPHLASKSSSPLWYAIRCASAHIIVLSSYSPFVKYTPQWEWLHQELKNV 305
Query: 305 DREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRI 364
+RE+TPWLIVLMHVP+YNSNEAHFMEGESMRA FE WF+RYKVD++FAGHVHAYERSYRI
Sbjct: 306 NREQTPWLIVLMHVPLYNSNEAHFMEGESMRAVFEKWFIRYKVDIIFAGHVHAYERSYRI 365
Query: 365 SNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLE 424
SN+ YN+SSG+ +P+ DKSAPVYITVGDGGNQEGLA +FR PQPDYSAFREAS+GHSTLE
Sbjct: 366 SNIQYNVSSGERYPIADKSAPVYITVGDGGNQEGLAARFRDPQPDYSAFREASFGHSTLE 425
Query: 425 IKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVG 475
IKNRTHAFY WNRNDDG KVATD+F+LHNQYWASN RRRKL KH+LRSVVG
Sbjct: 426 IKNRTHAFYQWNRNDDGNKVATDAFVLHNQYWASNPRRRKLKKHHLRSVVG 476
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142549|ref|XP_002324618.1| predicted protein [Populus trichocarpa] gi|222866052|gb|EEF03183.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/470 (82%), Positives = 423/470 (90%)
Query: 6 LLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHIT 65
+LL + + L + V G+AGITS FIR+EWPS DIPLD+E FAVPKGHN+PQQVHIT
Sbjct: 1 MLLQVLILVFFFLSASVKNGNAGITSTFIRSEWPSNDIPLDHEVFAVPKGHNAPQQVHIT 60
Query: 66 QGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVD 125
QGDY+GKAVIISWVTP EPG S V YG S +DFTAEG V NYTFY Y SGYIHQCLVD
Sbjct: 61 QGDYNGKAVIISWVTPDEPGTSKVQYGVSKKNYDFTAEGAVRNYTFYNYTSGYIHQCLVD 120
Query: 126 GLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG 185
GLEYDTKYYYKIG+GDS REFWFQTPPKI+PD YKFGIIGDLGQTYNSL+TLEHYM+SG
Sbjct: 121 GLEYDTKYYYKIGNGDSYREFWFQTPPKINPDTPYKFGIIGDLGQTYNSLATLEHYMQSG 180
Query: 186 AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVV 245
AQ VLF+GDL+YADRY + DVG+RWD+WGRFVERSAAYQPW+WS GNHEIEYM Y+GEV+
Sbjct: 181 AQAVLFVGDLAYADRYMYNDVGIRWDTWGRFVERSAAYQPWMWSVGNHEIEYMPYLGEVI 240
Query: 246 PFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVD 305
PFKSYL+RYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTP+WEWL+EEL++VD
Sbjct: 241 PFKSYLNRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPEWEWLQEELERVD 300
Query: 306 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRIS 365
REKTPWLIVLMHVPIYNSNEAHFMEGESMRA FE WFV YKVDV+FAGHVHAYERSYRIS
Sbjct: 301 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAVFEEWFVHYKVDVIFAGHVHAYERSYRIS 360
Query: 366 NLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEI 425
N+HYN+S GDC+P D+SAPVYITVGDGGNQEGLA +FR PQPDYSAFREASYGHSTLEI
Sbjct: 361 NIHYNVSGGDCYPAADESAPVYITVGDGGNQEGLAERFRDPQPDYSAFREASYGHSTLEI 420
Query: 426 KNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVG 475
KNRTHA YHWNRNDDGKKV TD+F+LHNQYW SN RRRKL KH+LRSVVG
Sbjct: 421 KNRTHALYHWNRNDDGKKVPTDAFVLHNQYWGSNLRRRKLKKHHLRSVVG 470
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15242870|ref|NP_198334.1| purple acid phosphatase 26 [Arabidopsis thaliana] gi|75249765|sp|Q949Y3.1|PPA26_ARATH RecName: Full=Bifunctional purple acid phosphatase 26; Includes: RecName: Full=Acid phosphatase; Includes: RecName: Full=Peroxidase; Flags: Precursor gi|15292757|gb|AAK92747.1| putative acid phosphatase [Arabidopsis thaliana] gi|20259673|gb|AAM14354.1| putative acid phosphatase [Arabidopsis thaliana] gi|332006529|gb|AED93912.1| purple acid phosphatase 26 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/476 (79%), Positives = 421/476 (88%), Gaps = 2/476 (0%)
Query: 4 MRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVH 63
M L+ +++ + VLL + G +GITS FIR+EWP++DIPLD+ F VPKG+N+PQQVH
Sbjct: 1 MNHLVIISVFLSSVLL--LYRGESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVH 58
Query: 64 ITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCL 123
ITQGDYDGKAVIISWVTP EPG S V YG K++F A+GT +NYTFYKYKSG+IH CL
Sbjct: 59 ITQGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCL 118
Query: 124 VDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME 183
V LE+DTKYYYKI SG+SSREFWF TPP + PDASYKFGIIGD+GQT+NSLSTLEHYME
Sbjct: 119 VSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYME 178
Query: 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
SGAQ VLFLGDLSYADRYQ+ DVGVRWDSWGRFVERS AYQPW+WSAGNHE++YM YMGE
Sbjct: 179 SGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGE 238
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
V PF++YL RY TP+LASKSSSPLWYA+RRASAHIIVLSSYSPFVKYTPQW WL EEL +
Sbjct: 239 VTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTR 298
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYR 363
VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE WFV++KVDV+FAGHVHAYERSYR
Sbjct: 299 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYR 358
Query: 364 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 423
ISN+ YN+SSGD +PVPDKSAPVYITVGDGGNQEGLAG+F PQPDYSAFREASYGHSTL
Sbjct: 359 ISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTL 418
Query: 424 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVGGLFA 479
+IKNRTHA YHWNRNDDGKKVATD F+LHNQYW N RRRKL KHY+RSVVGG A
Sbjct: 419 DIKNRTHAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIRSVVGGWIA 474
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446227|ref|XP_002264680.1| PREDICTED: bifunctional purple acid phosphatase 26-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/462 (81%), Positives = 416/462 (90%)
Query: 14 TAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKA 73
T V + V G+A ITS F+R+E+PS+DIPLDN+ FAVPKG+N+PQQVHITQGDYDGKA
Sbjct: 21 TFFVFMCCVGNGNARITSAFVRSEFPSVDIPLDNKVFAVPKGYNAPQQVHITQGDYDGKA 80
Query: 74 VIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133
VI+SWVT EPGPS V YGTS +D+TAEGT NYTFYKY+SGYIH CLVDGLE+DTKY
Sbjct: 81 VIVSWVTTDEPGPSKVQYGTSEKTYDYTAEGTTTNYTFYKYQSGYIHHCLVDGLEFDTKY 140
Query: 134 YYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLG 193
YYKIGSG+SS+EFWFQTPP+IDPDA Y FGIIGDLGQTYNSLSTLEHYM S QTVLFLG
Sbjct: 141 YYKIGSGNSSQEFWFQTPPEIDPDAPYIFGIIGDLGQTYNSLSTLEHYMHSEGQTVLFLG 200
Query: 194 DLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHR 253
DLSYADRYQ+ DVGVRWD+WGRFVE+SAAYQPWIWSAGNHEIEYM YMGEV+PFKSYL+R
Sbjct: 201 DLSYADRYQYNDVGVRWDTWGRFVEQSAAYQPWIWSAGNHEIEYMPYMGEVLPFKSYLYR 260
Query: 254 YPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLI 313
+PTP+ ASKSSSPLWYAIRRASAHIIVLSSYSPFV YTPQW WL EE K+V+REKTPWLI
Sbjct: 261 FPTPYAASKSSSPLWYAIRRASAHIIVLSSYSPFVTYTPQWLWLAEEFKRVNREKTPWLI 320
Query: 314 VLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISS 373
VLMHVPIYNSNEAHFMEGESMRAAFESWF+ KVD+VFAGHVHAYERSYRISN+HY++SS
Sbjct: 321 VLMHVPIYNSNEAHFMEGESMRAAFESWFILNKVDIVFAGHVHAYERSYRISNIHYSVSS 380
Query: 374 GDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFY 433
GD +PVPD+SAPVYITVGDGGNQEGLAG+FR PQPDYSAFREASYGHSTLEIKNRTHAFY
Sbjct: 381 GDPYPVPDESAPVYITVGDGGNQEGLAGRFRDPQPDYSAFREASYGHSTLEIKNRTHAFY 440
Query: 434 HWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVG 475
WNRN DGK+V+TDSF+LHNQYWAS RKL KH L ++G
Sbjct: 441 RWNRNSDGKQVSTDSFVLHNQYWASKLGSRKLKKHRLGDLIG 482
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297805048|ref|XP_002870408.1| ATPAP26/PAP26 [Arabidopsis lyrata subsp. lyrata] gi|297316244|gb|EFH46667.1| ATPAP26/PAP26 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/468 (80%), Positives = 415/468 (88%)
Query: 9 HLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGD 68
HL + + + V G AG+TS FIR+EWP++DIPLD+ F +PKG+N+PQQVHITQGD
Sbjct: 3 HLVIFSVFLSSVLVYRGDAGVTSSFIRSEWPAVDIPLDHHVFKIPKGYNAPQQVHITQGD 62
Query: 69 YDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128
YDGKAVIISWVTP EPG S V YG K++F AEGT +NYTFYKYKSG+IH CLV GLE
Sbjct: 63 YDGKAVIISWVTPDEPGSSKVYYGAVQGKYEFVAEGTYHNYTFYKYKSGFIHHCLVSGLE 122
Query: 129 YDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESGAQT 188
+DTKYYYKI SGDSSREFWF TPP++ PDASYKFGIIGD+GQT+NSLSTLEHYM+SGAQ
Sbjct: 123 HDTKYYYKIESGDSSREFWFVTPPEVHPDASYKFGIIGDMGQTFNSLSTLEHYMQSGAQA 182
Query: 189 VLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFK 248
VLFLGDLSYADRY++ DVGVRWDSWGRFVE S AYQPW+WSAGNHE++YM YMGEV PF+
Sbjct: 183 VLFLGDLSYADRYEYNDVGVRWDSWGRFVEPSTAYQPWLWSAGNHEVDYMPYMGEVTPFR 242
Query: 249 SYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREK 308
+YL RY TP+LASKSSSPLWYA+RRASAHIIVLSSYSPFVKYTPQW WL EELK+VDREK
Sbjct: 243 NYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELKRVDREK 302
Query: 309 TPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLH 368
TPWLIVLMHVPIYNSNEAHFMEGESMRA FE WFV +KVDV+FAGHVHAYERSYRISN+
Sbjct: 303 TPWLIVLMHVPIYNSNEAHFMEGESMRAVFEEWFVEHKVDVIFAGHVHAYERSYRISNVR 362
Query: 369 YNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNR 428
YN+SSGD FPVPDKSAPVYITVGDGGNQEGLAG+FR PQPDYSAFREASYGHSTL+IKNR
Sbjct: 363 YNVSSGDRFPVPDKSAPVYITVGDGGNQEGLAGRFREPQPDYSAFREASYGHSTLDIKNR 422
Query: 429 THAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVGG 476
THA YHWNRNDDGKKVATD F+LHNQYW N RRRKL KHY++SVV G
Sbjct: 423 THAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIKSVVAG 470
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357601492|gb|AET86956.1| PAP26 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/470 (79%), Positives = 415/470 (88%)
Query: 4 MRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVH 63
M+ LL + V+L+ VN +AGITS+FIR EWPS+DIPLD+E FAVPKG+N+PQQVH
Sbjct: 1 MKSLLFQFILVPFVILNFVNNVNAGITSRFIREEWPSVDIPLDHEVFAVPKGYNAPQQVH 60
Query: 64 ITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCL 123
ITQG+YDG AVIISW+T EPG S V YG S ++F+AEG + NYTFYKY SGYIH L
Sbjct: 61 ITQGNYDGNAVIISWITFDEPGSSKVQYGKSDKNYEFSAEGKMTNYTFYKYNSGYIHHVL 120
Query: 124 VDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME 183
VDGLEYDTKYYYK G GDS+REFWFQTPP I PD YKFGIIGDLGQTYNSLSTLEHYME
Sbjct: 121 VDGLEYDTKYYYKTGDGDSAREFWFQTPPMIGPDVPYKFGIIGDLGQTYNSLSTLEHYME 180
Query: 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
SGAQ+VLF+GDLSYADRY++ DVG+RWDSWGRFVE+S AYQPWIWSAGNHEIEYM YM E
Sbjct: 181 SGAQSVLFVGDLSYADRYKYNDVGIRWDSWGRFVEKSTAYQPWIWSAGNHEIEYMPYMNE 240
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
V PFKSYLHRYPTP+LASKSSSP+WYAIRRASAHII+LSSYSPFVKYTPQW+WL EEL +
Sbjct: 241 VTPFKSYLHRYPTPYLASKSSSPMWYAIRRASAHIIMLSSYSPFVKYTPQWKWLEEELNR 300
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYR 363
VDR+KTPWLIVL+HVPIYNSNEAHFMEGESMRA FE WF+ +KVDV+FAGHVHAYERSYR
Sbjct: 301 VDRKKTPWLIVLVHVPIYNSNEAHFMEGESMRAVFEEWFIHHKVDVIFAGHVHAYERSYR 360
Query: 364 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 423
ISN+ YN+SSG+ FPVPD+SAPVYITVGDGGNQEGLAGKFR PQPDYSAFREASYGHSTL
Sbjct: 361 ISNIRYNVSSGERFPVPDESAPVYITVGDGGNQEGLAGKFRDPQPDYSAFREASYGHSTL 420
Query: 424 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSV 473
EI NRTHA YHWNRNDDGKKVA DSF+L+NQYW+SN R RKL +HYL +
Sbjct: 421 EIMNRTHAVYHWNRNDDGKKVAIDSFVLNNQYWSSNVRERKLKRHYLNGM 470
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|56788343|gb|AAW29950.1| putative purple acid phosphatase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/476 (79%), Positives = 419/476 (88%), Gaps = 2/476 (0%)
Query: 4 MRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVH 63
M L+ +++ + VLL + G +GITS FIR+EWP++DIPLD+ F VPKG+N+PQQVH
Sbjct: 1 MNHLVIISVFLSSVLL--LYRGESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVH 58
Query: 64 ITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCL 123
ITQGDYDGKAVIISWVTP EPG S V YG K++F A+GT +NYTFYKYKSG+IH CL
Sbjct: 59 ITQGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCL 118
Query: 124 VDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME 183
V LE+DTKYYYKI SG+SSREFWF TPP + PDASYKFGIIGD+GQT+NSLSTLEHYME
Sbjct: 119 VSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYME 178
Query: 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
SGAQ VLFLGDLSYADRYQ+ DVGVRWDSWGRFVERS AYQPW+WSAGNHE++YM YMGE
Sbjct: 179 SGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGE 238
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
V PF++YL RY TP+LASKSSSPLWYA+RRASAHIIVLSSYSPFVKYTPQW WL EEL +
Sbjct: 239 VTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTR 298
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYR 363
VD EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE WFV++KVDV+FAGHVHAYERSYR
Sbjct: 299 VDGEKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYR 358
Query: 364 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 423
ISN+ YN+SSGD +PVPDKSAPVYITVGDGGNQEGLAG+F PQPDYSAFREASYGHSTL
Sbjct: 359 ISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTL 418
Query: 424 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVGGLFA 479
IKNRTHA YHWNRNDDGKKVATD F+LHNQYW N RRRKL KHY+RSVVGG A
Sbjct: 419 GIKNRTHAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIRSVVGGWIA 474
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296084523|emb|CBI25544.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/457 (82%), Positives = 414/457 (90%)
Query: 19 LSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISW 78
+ V G+A ITS F+R+E+PS+DIPLDN+ FAVPKG+N+PQQVHITQGDYDGKAVI+SW
Sbjct: 1 MCCVGNGNARITSAFVRSEFPSVDIPLDNKVFAVPKGYNAPQQVHITQGDYDGKAVIVSW 60
Query: 79 VTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIG 138
VT EPGPS V YGTS +D+TAEGT NYTFYKY+SGYIH CLVDGLE+DTKYYYKIG
Sbjct: 61 VTTDEPGPSKVQYGTSEKTYDYTAEGTTTNYTFYKYQSGYIHHCLVDGLEFDTKYYYKIG 120
Query: 139 SGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYA 198
SG+SS+EFWFQTPP+IDPDA Y FGIIGDLGQTYNSLSTLEHYM S QTVLFLGDLSYA
Sbjct: 121 SGNSSQEFWFQTPPEIDPDAPYIFGIIGDLGQTYNSLSTLEHYMHSEGQTVLFLGDLSYA 180
Query: 199 DRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPH 258
DRYQ+ DVGVRWD+WGRFVE+SAAYQPWIWSAGNHEIEYM YMGEV+PFKSYL+R+PTP+
Sbjct: 181 DRYQYNDVGVRWDTWGRFVEQSAAYQPWIWSAGNHEIEYMPYMGEVLPFKSYLYRFPTPY 240
Query: 259 LASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHV 318
ASKSSSPLWYAIRRASAHIIVLSSYSPFV YTPQW WL EE K+V+REKTPWLIVLMHV
Sbjct: 241 AASKSSSPLWYAIRRASAHIIVLSSYSPFVTYTPQWLWLAEEFKRVNREKTPWLIVLMHV 300
Query: 319 PIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFP 378
PIYNSNEAHFMEGESMRAAFESWF+ KVD+VFAGHVHAYERSYRISN+HY++SSGD +P
Sbjct: 301 PIYNSNEAHFMEGESMRAAFESWFILNKVDIVFAGHVHAYERSYRISNIHYSVSSGDPYP 360
Query: 379 VPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRN 438
VPD+SAPVYITVGDGGNQEGLAG+FR PQPDYSAFREASYGHSTLEIKNRTHAFY WNRN
Sbjct: 361 VPDESAPVYITVGDGGNQEGLAGRFRDPQPDYSAFREASYGHSTLEIKNRTHAFYRWNRN 420
Query: 439 DDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVG 475
DGK+V+TDSF+LHNQYWAS RKL KH L ++G
Sbjct: 421 SDGKQVSTDSFVLHNQYWASKLGSRKLKKHRLGDLIG 457
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21464654|emb|CAD30328.1| acid phosphatase [Lupinus luteus] | Back alignment and taxonomy information |
|---|
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/471 (77%), Positives = 422/471 (89%)
Query: 4 MRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVH 63
MR++L + + VLLS + GSAGITS FIR+E+PS DIPLD+E FAVPKG+N+PQQVH
Sbjct: 1 MRVVLLYLVLASFVLLSSIKDGSAGITSSFIRSEFPSTDIPLDHEVFAVPKGYNAPQQVH 60
Query: 64 ITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCL 123
ITQGDYDGKAVI+SWVT EPGPS V +GTS +KF +AEGTV+NYTFYKYKSGY+H CL
Sbjct: 61 ITQGDYDGKAVIVSWVTTDEPGPSKVQFGTSENKFQTSAEGTVSNYTFYKYKSGYVHHCL 120
Query: 124 VDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME 183
++GLEY TKYYY+IGSGD+SREFWF+TPPK++PD YKFGIIGDLGQT+NSLSTLEHY++
Sbjct: 121 IEGLEYKTKYYYRIGSGDASREFWFETPPKVEPDVPYKFGIIGDLGQTFNSLSTLEHYLQ 180
Query: 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
SGAQTVLF+GDLSYADRY++ DVG+RWD+WGRF ERS AYQPWIWS GNHE++YM YMGE
Sbjct: 181 SGAQTVLFVGDLSYADRYKYNDVGLRWDTWGRFAERSTAYQPWIWSVGNHEVDYMPYMGE 240
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
V PFK++L+RY TP+LAS+SSSPLWYAIRRASAHIIVLSSYSPFVKYTPQ+ WL+EEL +
Sbjct: 241 VTPFKNFLNRYTTPYLASQSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQYTWLKEELTR 300
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYR 363
VDREKTPWLIVLMHVP+YNSNEAH+MEGESMR+ FESWF+ Y+VDV+FAGHVHAYERSYR
Sbjct: 301 VDREKTPWLIVLMHVPLYNSNEAHYMEGESMRSVFESWFIHYEVDVIFAGHVHAYERSYR 360
Query: 364 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 423
SN YNI+SG FP+ DKSAPVYITVGDGGNQEGLA +F PQP+YSAFREASYGHSTL
Sbjct: 361 FSNTDYNITSGHRFPIADKSAPVYITVGDGGNQEGLASRFTDPQPEYSAFREASYGHSTL 420
Query: 424 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVV 474
EIKNRTHA YHWNRNDDGKKV DSFIL+NQYW SNRRRRKL K++L ++V
Sbjct: 421 EIKNRTHAIYHWNRNDDGKKVPIDSFILYNQYWGSNRRRRKLKKNFLMTLV 471
|
Source: Lupinus luteus Species: Lupinus luteus Genus: Lupinus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 479 | ||||||
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.979 | 0.987 | 0.801 | 2.4e-218 | |
| TAIR|locus:2005533 | 469 | PAP12 "AT2G27190" [Arabidopsis | 0.901 | 0.921 | 0.615 | 1.8e-151 | |
| UNIPROTKB|Q09131 | 464 | PAP "Purple acid phosphatase" | 0.924 | 0.954 | 0.602 | 5.5e-148 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.926 | 0.948 | 0.574 | 9.6e-144 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.910 | 0.935 | 0.577 | 3.1e-138 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.916 | 0.942 | 0.570 | 6.5e-138 | |
| TAIR|locus:2053149 | 441 | PAP11 "purple acid phosphatase | 0.636 | 0.691 | 0.605 | 2.8e-98 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.801 | 0.878 | 0.425 | 3.2e-81 | |
| TAIR|locus:2075341 | 388 | PAP19 "purple acid phosphatase | 0.365 | 0.451 | 0.602 | 6.6e-79 | |
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.810 | 0.894 | 0.414 | 3.8e-78 |
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2109 (747.5 bits), Expect = 2.4e-218, P = 2.4e-218
Identities = 380/474 (80%), Positives = 418/474 (88%)
Query: 9 HLALTTAIVLLSDV---NGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHIT 65
HL + + V LS V G +GITS FIR+EWP++DIPLD+ F VPKG+N+PQQVHIT
Sbjct: 3 HLVIIS--VFLSSVLLLYRGESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVHIT 60
Query: 66 QGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVD 125
QGDYDGKAVIISWVTP EPG S V YG K++F A+GT +NYTFYKYKSG+IH CLV
Sbjct: 61 QGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCLVS 120
Query: 126 GLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG 185
LE+DTKYYYKI SG+SSREFWF TPP + PDASYKFGIIGD+GQT+NSLSTLEHYMESG
Sbjct: 121 DLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYMESG 180
Query: 186 AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVV 245
AQ VLFLGDLSYADRYQ+ DVGVRWDSWGRFVERS AYQPW+WSAGNHE++YM YMGEV
Sbjct: 181 AQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGEVT 240
Query: 246 PFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVD 305
PF++YL RY TP+LASKSSSPLWYA+RRASAHIIVLSSYSPFVKYTPQW WL EEL +VD
Sbjct: 241 PFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVD 300
Query: 306 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRIS 365
REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE WFV++KVDV+FAGHVHAYERSYRIS
Sbjct: 301 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRIS 360
Query: 366 NLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEI 425
N+ YN+SSGD +PVPDKSAPVYITVGDGGNQEGLAG+F PQPDYSAFREASYGHSTL+I
Sbjct: 361 NVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTLDI 420
Query: 426 KNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVGGLFA 479
KNRTHA YHWNRNDDGKKVATD F+LHNQYW N RRRKL KHY+RSVVGG A
Sbjct: 421 KNRTHAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIRSVVGGWIA 474
|
|
| TAIR|locus:2005533 PAP12 "AT2G27190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1478 (525.3 bits), Expect = 1.8e-151, P = 1.8e-151
Identities = 269/437 (61%), Positives = 333/437 (76%)
Query: 28 GITSKFIR-TEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGP 86
G TS+++R ++ P D+PLD++ F VP G NSPQQVH+TQG+++G VIISWVTP +PG
Sbjct: 29 GFTSEYVRGSDLPD-DMPLDSDVFEVPPGPNSPQQVHVTQGNHEGNGVIISWVTPVKPGS 87
Query: 87 STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREF 146
TV Y +K AE TVN Y F+ Y SGYIH CL+D LE+DTKYYY+IGSG SR F
Sbjct: 88 KTVQYWCENEKSRKQAEATVNTYRFFNYTSGYIHHCLIDDLEFDTKYYYEIGSGKWSRRF 147
Query: 147 WFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHY-MESG-AQTVLFLGDLSYADRYQFI 204
WF PPK PD Y FG+IGDLGQTY+S STL HY M G Q VLF+GDLSYADRY
Sbjct: 148 WFFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQAVLFVGDLSYADRYPNH 207
Query: 205 DVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSS 264
D RWD+WGRFVERS AYQPWIW+AGNHEI+++ +GE+ PFK +++RY TPH AS S
Sbjct: 208 DNN-RWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFKPFMNRYHTPHKASGSI 266
Query: 265 SPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSN 324
SPLWY+I+RASA+IIV+S YS + YTPQ++WL +EL+ V+R +TPWLIVL+H P Y+S
Sbjct: 267 SPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTETPWLIVLVHSPFYSSY 326
Query: 325 EAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSA 384
H+MEGE++R +E WFV+YKVDVVFAGHVHAYERS R+SN+ YNI +G C P+ D+SA
Sbjct: 327 VHHYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERSERVSNIAYNIVNGLCEPISDESA 386
Query: 385 PVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKV 444
P+YIT+GDGGN EGL PQP YSAFREAS+GH LEIKNRTHA++ WNRN DG V
Sbjct: 387 PIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDGNAV 446
Query: 445 ATDSFILHNQYWASNRR 461
A DS L N++W + ++
Sbjct: 447 AADSVWLLNRFWRAQKK 463
|
|
| UNIPROTKB|Q09131 PAP "Purple acid phosphatase" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
Score = 1445 (513.7 bits), Expect = 5.5e-148, P = 5.5e-148
Identities = 273/453 (60%), Positives = 334/453 (73%)
Query: 7 LLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQ 66
LL LAL + ++ NGGS+ S FIR ++D+PLD++ FAVP G+N+PQQVHITQ
Sbjct: 7 LLALALVLSACVMC--NGGSS---SPFIRKVEKTVDMPLDSDVFAVPPGYNAPQQVHITQ 61
Query: 67 GDYDGKAVIISWVTPHEPGPSTVSYGT-SADKFDFTAEGTVNNYTFYKYKSGYIHQCLVD 125
GD GKAVI+SWVT EPG S V Y + ++DK AEG + Y F+ Y SG+IH +
Sbjct: 62 GDLVGKAVIVSWVTVDEPGSSEVHYWSENSDKKKI-AEGKLVTYRFFNYSSGFIHHTTIR 120
Query: 126 GLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG 185
LEY TKYYY++G G+++R+FWF TPP+I PD Y FG+IGDLGQ+++S TL HY +
Sbjct: 121 NLEYKTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNP 180
Query: 186 --AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
QTVLF+GDLSYAD Y D +RWDSWGRF ERS AYQPWIW+AGNHE + +GE
Sbjct: 181 RKGQTVLFVGDLSYADNYPNHD-NIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGE 239
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
VPFK Y HRY P+ AS+S+SP WY+I+RASAHIIVL+SYS + KYTPQ++WL +EL K
Sbjct: 240 TVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPK 299
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYR 363
V+R +TPWLIVLMH P YNS H+MEGE+MR +E WFV+YKVDVVFAGHVHAYERS R
Sbjct: 300 VNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSER 359
Query: 364 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 423
+SN+ YNI +G C PV DKSAPVYIT+GDGG EGLA PQP YSAFREAS+GH+
Sbjct: 360 VSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFREASFGHAIF 419
Query: 424 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYW 456
+I NRTHA Y W+RN DG V DS N+YW
Sbjct: 420 DITNRTHAHYSWHRNQDGVAVEADSLWSFNRYW 452
|
|
| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1405 (499.6 bits), Expect = 9.6e-144, P = 9.6e-144
Identities = 258/449 (57%), Positives = 321/449 (71%)
Query: 10 LALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDY 69
+ L VL S + G GITS+++R ++D+PLD++ F VP G+N+PQQVHITQGD
Sbjct: 12 IVLVLCCVLNSLLCNG--GITSRYVRKLEATVDMPLDSDVFRVPCGYNAPQQVHITQGDV 69
Query: 70 DGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129
+GKAVI+SWVT G + V Y A G N Y FY Y SG+IH C + LEY
Sbjct: 70 EGKAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHHCPIRNLEY 129
Query: 130 DTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESGA--Q 187
DTKYYY +G G + R+FWF TPP+I PD Y FG+IGDLGQ+Y+S TL HY + Q
Sbjct: 130 DTKYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQ 189
Query: 188 TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPF 247
VLF+GD+SYAD Y D RWDSWGRF ERS AYQPWIW+ GNHE+++ +GE PF
Sbjct: 190 AVLFVGDISYADTYPDHD-NRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPF 248
Query: 248 KSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDRE 307
K + HRY TP+ +S S+ P WY+I+R A+IIVL+SYS + KYTPQ++WL EE KV+R
Sbjct: 249 KPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRT 308
Query: 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNL 367
+TPWLIVLMH P YNS + H+MEGE+MR +E+WFV+YKVDVVFAGHVHAYERS R+SN+
Sbjct: 309 ETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNI 368
Query: 368 HYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKN 427
YN+ +G C PV D+SAPVYIT+GDGGN EGLA K PQP YSAFREAS+GH+ IKN
Sbjct: 369 AYNVVNGICTPVKDQSAPVYITIGDGGNIEGLATKMTEPQPKYSAFREASFGHAIFSIKN 428
Query: 428 RTHAFYHWNRNDDGKKVATDSFILHNQYW 456
RTHA Y W+RN DG V D +N++W
Sbjct: 429 RTHAHYGWHRNHDGYAVEGDRMWFYNRFW 457
|
|
| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1353 (481.3 bits), Expect = 3.1e-138, P = 3.1e-138
Identities = 258/447 (57%), Positives = 326/447 (72%)
Query: 17 VLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVII 76
V LS ++G TS F+RT PS ++ L E F P GHN+P+QVHI QGDY+G+ +II
Sbjct: 11 VFLSIATVINSGTTSNFVRTAQPSTEMSL--ETFPSPAGHNAPEQVHIVQGDYNGRGIII 68
Query: 77 SWVTP-HEPGPSTVSYGTSADKFDFTAE-----GTVNNYTFYKYKSGYIHQCLVDGLEYD 130
SWVTP + G + V+Y + D D + + ++Y FY Y SG++H + GLEYD
Sbjct: 69 SWVTPLNLAGSNVVTYWKAVDG-DVKPKKKRGHASTSSYRFYDYTSGFLHHATIKGLEYD 127
Query: 131 TKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG-AQTV 189
TKY Y++G+ S R+F F +PPK+ PD Y FGIIGDLGQT S TL HYM + Q V
Sbjct: 128 TKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLYHYMSNPKGQAV 187
Query: 190 LFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKS 249
LF GDLSYAD + D +WDSWGRFVE AAYQ +I++AGNHEI+++ +GE FK
Sbjct: 188 LFPGDLSYADDHPNHDQR-KWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIGEPHAFKP 246
Query: 250 YLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKT 309
Y+HRY + ASKS SPLWY+IRRASAHIIVLSSYS + KYTPQ+ WL +ELKKV+RE+T
Sbjct: 247 YIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELKKVNREET 306
Query: 310 PWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHY 369
PWLIV++H P YNSN H+MEGESMRA FESWFV KVD+V +GHVH+YERS R+SN+ Y
Sbjct: 307 PWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVSNIKY 366
Query: 370 NISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRT 429
NI++G +PV D SAP+YIT+GDGGN EG+A F PQP YSA+REAS+GH+ LEI NRT
Sbjct: 367 NITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYREASFGHAVLEIYNRT 426
Query: 430 HAFYHWNRNDDGKKVATDSFILHNQYW 456
HA+Y W+RN D + VA DS +LHN+Y+
Sbjct: 427 HAYYTWHRNQDNEPVAADSIMLHNRYF 453
|
|
| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1350 (480.3 bits), Expect = 6.5e-138, P = 6.5e-138
Identities = 256/449 (57%), Positives = 326/449 (72%)
Query: 15 AIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAV 74
A + LS + GITSKF+R PSI++ LD F P G+N+P+QVH+TQGD+DG+ +
Sbjct: 8 AFLFLSITTVINGGITSKFVRQALPSIEMSLDT--FPSPGGYNTPEQVHLTQGDHDGRGM 65
Query: 75 IISWVTP-HEPGPSTVSYGTSADKFDFT-----AEGTVNNYTFYKYKSGYIHQCLVDGLE 128
I+SWVTP + G + V+Y + + D A + +Y FY Y SG++H + GLE
Sbjct: 66 IVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLHHATIKGLE 125
Query: 129 YDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG-AQ 187
YDTKY Y++G+ S R+F F TPPKI PD Y FGIIGDLGQTY S TL HYM + Q
Sbjct: 126 YDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMSNPKGQ 185
Query: 188 TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPF 247
VLF GDLSYAD + D +WD+WGRF+E AAYQP+I++AGNHEI+++ +GE F
Sbjct: 186 AVLFAGDLSYADDHPNHDQR-KWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPHAF 244
Query: 248 KSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDRE 307
K Y HRYP + AS+S+SPLWY++RRASAHIIVLSSYS + KYTPQ+ WL +ELK V+RE
Sbjct: 245 KPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVNRE 304
Query: 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNL 367
+TPWLIV++H P YNSN H+MEGESMR FESW V KVD+V +GHVHAYERS RISN+
Sbjct: 305 ETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERISNI 364
Query: 368 HYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKN 427
YNI++G PV D +AP+YIT+GDGGN EG+A F PQP YSA+REAS+GH+ LEI N
Sbjct: 365 KYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVDPQPSYSAYREASFGHAVLEIMN 424
Query: 428 RTHAFYHWNRNDDGKKVATDSFILHNQYW 456
RTHA Y W+RN D + VA DS +LHN+++
Sbjct: 425 RTHAQYTWHRNQDNEPVAADSIMLHNRHF 453
|
|
| TAIR|locus:2053149 PAP11 "purple acid phosphatase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 186/307 (60%), Positives = 225/307 (73%)
Query: 151 PPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG-AQTVLFLGDLSYADRYQFIDVGVR 209
P K S DLGQTY S TL +YM + Q VLF+GDLSYAD + D +
Sbjct: 129 PSKSRSRCSLHIRYYSDLGQTYASNQTLYNYMSNPKGQAVLFVGDLSYADDHPNHDQR-K 187
Query: 210 WDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWY 269
WDS+GRFVE SAAYQPW W+AGN+EI+Y + E PFK Y +RY P+ AS+S+SPLWY
Sbjct: 188 WDSYGRFVEPSAAYQPWSWAAGNYEIDYAQSISETQPFKPYKNRYHVPYKASQSTSPLWY 247
Query: 270 AIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFM 329
+I+RAS +IIVLSSYS + KYTPQ WL++ELKKV+R +T WLIVL+H P YNSN H+M
Sbjct: 248 SIKRASTYIIVLSSYSAYDKYTPQNSWLQDELKKVNRSETSWLIVLVHAPWYNSNNYHYM 307
Query: 330 EGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYIT 389
EGESMR FE WFV KVD+VFAGHVHAYERS RISN+HYNI+ G PV D++AP+YIT
Sbjct: 308 EGESMRVTFEPWFVENKVDIVFAGHVHAYERSKRISNIHYNITDGMSTPVKDQNAPIYIT 367
Query: 390 VGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSF 449
+GDGGN EG+A F PQP YSAFREAS+GH+ LEIKNRTHA Y W+RN + + V DS
Sbjct: 368 IGDGGNIEGIANSFTDPQPSYSAFREASFGHALLEIKNRTHAHYTWHRNKEDEAVIADSI 427
Query: 450 ILHNQYW 456
L +Y+
Sbjct: 428 WLKKRYY 434
|
|
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 176/414 (42%), Positives = 246/414 (59%)
Query: 44 PLDNEAFAVP---KGHNSPQQVHIT-QGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFD 99
P E P K + P+QVHI+ GD K + ++WVT + PS V YGTS K+
Sbjct: 29 PKPRETLQFPWKQKSSSVPEQVHISLAGD---KHMRVTWVTNDKSSPSFVEYGTSPGKYS 85
Query: 100 FTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDAS 159
+ +G +Y++ Y+SG IH ++ LE DT YYY+ G G+ EF +TPP P
Sbjct: 86 YLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCG-GEGP-EFHLKTPPAQFP--- 140
Query: 160 YKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER 219
F + GDLGQT + STL+H + L GDLSYAD Q +WD++G V+
Sbjct: 141 ITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQH-----KWDTFGELVQP 195
Query: 220 SAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHII 279
A+ +PW+ + GNHE E + ++ V F S+ R+ P+ S S+S L+Y+ A H I
Sbjct: 196 LASVRPWMVTQGNHEKESIPFI--VDEFVSFNSRWKMPYEESGSNSNLYYSFEVAGVHAI 253
Query: 280 VLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE 339
+L SY+ + +Y+ Q+ WL+ +L KVDRE+TPWLIVL HVP YNSN AH EG+ M A E
Sbjct: 254 MLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEME 313
Query: 340 SWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGL 399
VD+VF GHVHAYER+ R++N G D PV+IT+GDGGN+EGL
Sbjct: 314 PLLYASGVDIVFTGHVHAYERTKRVNN-------GKS----DPCGPVHITIGDGGNREGL 362
Query: 400 AGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 453
A K++ P P++S FREAS+GH L++ N THA + W+RNDD + +D L++
Sbjct: 363 ARKYKDPSPEWSVFREASFGHGELQMVNSTHALWTWHRNDDDEPTRSDEVWLNS 416
|
|
| TAIR|locus:2075341 PAP19 "purple acid phosphatase 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 568 (205.0 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 112/186 (60%), Positives = 134/186 (72%)
Query: 275 SAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESM 334
S + + SSYSP + L +ELKKV+R +TPWLIVL+H P YNSN H+MEGESM
Sbjct: 203 SNELQLTSSYSPLTQ-------LMDELKKVNRSETPWLIVLVHAPWYNSNNYHYMEGESM 255
Query: 335 RAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGG 394
R FE WFV KVD+VFAGHVHAYERS RISN+ YNI+ G PV D++APVYIT+GDGG
Sbjct: 256 RVTFEPWFVENKVDIVFAGHVHAYERSERISNIQYNITDGMSTPVKDQNAPVYITIGDGG 315
Query: 395 NQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGK----KVATDSFI 450
N EG+A F PQP YSAFREAS+GH+ LEIKNRTHA Y W+RN + + V DS
Sbjct: 316 NIEGIANNFIDPQPSYSAFREASFGHAILEIKNRTHAHYTWHRNKEDEFIPEAVIADSIW 375
Query: 451 LHNQYW 456
L N+Y+
Sbjct: 376 LKNRYY 381
|
|
| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 173/417 (41%), Positives = 240/417 (57%)
Query: 54 KGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYK 113
+ + PQQVHI+ D V +++T S V YG K+D A G +Y ++
Sbjct: 42 RSKSDPQQVHISLAGKDHMRV--TFITEDNKVESVVEYGKQPGKYDGKATGECTSYKYFF 99
Query: 114 YKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYN 173
YKSG IH + L+ +T YYY+ G + EF F+TPP P +F I+GDLGQT
Sbjct: 100 YKSGKIHHVKIGPLQANTTYYYRCGG--NGPEFSFKTPPSTFP---VEFAIVGDLGQTEW 154
Query: 174 SLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233
+ +TL H L GDLSYAD +Q + WDS+GR VE A+ +PW+ + GNH
Sbjct: 155 TAATLSHINSQDYDVFLLPGDLSYADTHQPL-----WDSFGRLVEPLASKRPWMVTEGNH 209
Query: 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQ 293
EIE+ + E FKSY R+ PH S S+S L+Y+ A H ++L SY+ F + Q
Sbjct: 210 EIEFFPII-EHTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQ 268
Query: 294 WEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAG 353
++WL+ +L KVDR+ TPW++VL+H P YN+NEAH EGESMR A ES +VDVVF+G
Sbjct: 269 YQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLLFNARVDVVFSG 328
Query: 354 HVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAF 413
HVHAYER R+ YN + C P++IT+GDGGN+EGLA F+ P S F
Sbjct: 329 HVHAYERFKRV----YNNKADPC-------GPIHITIGDGGNREGLALSFKKPPSPLSEF 377
Query: 414 REASYGHSTLEIKNRTHAFYHWNRNDDGK-----KVATDSFILHNQYWASNRRRRKL 465
RE+S+GH L++ + A + W+RN+D +V DS + W S+R +L
Sbjct: 378 RESSFGHGRLKVMDGKRAHWSWHRNNDSNSLLADEVWLDSLSTSSSCWPSSRSNDEL 434
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q93WP4 | PEPP_ALLCE | 3, ., 1, ., 3, ., 6, 0 | 0.7422 | 0.9331 | 0.9293 | N/A | no |
| Q9SDZ9 | PPAF2_IPOBA | 3, ., 1, ., 3, ., 2 | 0.5945 | 0.9206 | 0.9483 | N/A | no |
| Q949Y3 | PPA26_ARATH | 1, ., 1, 1, ., 1, ., 7 | 0.7962 | 0.9895 | 0.9978 | yes | no |
| Q9SE00 | PPAF1_IPOBA | 3, ., 1, ., 3, ., 2 | 0.5793 | 0.9457 | 0.9577 | N/A | no |
| P80366 | PPAF_PHAVU | 3, ., 1, ., 3, ., 2 | 0.5751 | 0.8830 | 0.9791 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.152.194.1 | hypothetical protein (471 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 479 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 1e-106 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 1e-100 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-24 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 7e-21 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 1e-09 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 5e-09 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 1e-07 | |
| cd07402 | 240 | cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and | 7e-05 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 317 bits (814), Expect = e-106
Identities = 128/306 (41%), Positives = 174/306 (56%), Gaps = 20/306 (6%)
Query: 156 PDASYKFGIIGDLGQ-TYNSLSTLEHYMESG--AQTVLFLGDLSYADRYQFIDVGVRWDS 212
D +KF + GD+GQ T NS +TL+H + +L +GDL+YAD Y + G RWD+
Sbjct: 1 DDTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGY---NNGSRWDT 57
Query: 213 WGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIR 272
+ R +E A+Y P++ + GNHE +Y K++ R+ PH S S+S LWY+
Sbjct: 58 FMRQIEPLASYVPYMVTPGNHEADYN---FSFYKIKAFFPRFRFPHSPSGSTSNLWYSFD 114
Query: 273 RASAHIIVLSSYSPFV---KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFM 329
H + LS+ F +PQ++WL +L KVDR KTPW+IV+ H P+Y SN H
Sbjct: 115 VGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDD 174
Query: 330 --EGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVY 387
EGE MRAA E F +Y VD+V +GHVHAYER+ + N GDC P + PV+
Sbjct: 175 CIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV---GDCNPYSNPKGPVH 231
Query: 388 ITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATD 447
I +G GGN EGL P P +SAFRE+ YG L + N TH + W RNDDG + D
Sbjct: 232 IVIGAGGNDEGLDPFSAPP-PAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVI--D 288
Query: 448 SFILHN 453
SF +
Sbjct: 289 SFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 307 bits (787), Expect = e-100
Identities = 166/397 (41%), Positives = 236/397 (59%), Gaps = 26/397 (6%)
Query: 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYK-YKS 116
P QVHI+ D + ISW+T PS V YGT + K++ +A GT ++Y + Y+S
Sbjct: 43 HPDQVHISLVGPD--KMRISWITQDSIPPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRS 99
Query: 117 GYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLS 176
G I+ ++ L+ +T YYYK G S++EF F+TPP P KF + GDLG + + S
Sbjct: 100 GQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSKFP---IKFAVSGDLGTSEWTKS 156
Query: 177 TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236
TLEH + + GDLSYA+ YQ + WD++GR V+ A+ +PW+ + GNHE+E
Sbjct: 157 TLEHVSKWDYDVFILPGDLSYANFYQPL-----WDTFGRLVQPLASQRPWMVTHGNHELE 211
Query: 237 YMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEW 296
+ + F +Y R+ P S S+S L+Y+ HII+L SY+ F + Q++W
Sbjct: 212 KIPIL-HPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQW 270
Query: 297 LREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGES--MRAAFESWFVRYKVDVVFAGH 354
L LKK+DR+ TPW++ ++H P YNSNEAH E ES M+ + E+ + +VD+VFAGH
Sbjct: 271 LENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGH 330
Query: 355 VHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFR 414
VHAYER R+ DK PVYIT+GDGGN+EGLA K+ P+PD S FR
Sbjct: 331 VHAYERFDRVYQGKT-----------DKCGPVYITIGDGGNREGLATKYIDPKPDISLFR 379
Query: 415 EASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFIL 451
EAS+GH L + + + W+RNDD + VA+DS L
Sbjct: 380 EASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWL 416
|
Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 99.4 bits (247), Expect = 2e-24
Identities = 42/202 (20%), Positives = 59/202 (29%), Gaps = 21/202 (10%)
Query: 161 KFGIIGDLGQTYNSLSTLEHYME----SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRF 216
+ +IGDL + L L +E VLFLGDL F
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPP------SLEVLALLF 54
Query: 217 VERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASA 276
+ A P GNH+ + + L S +
Sbjct: 55 ALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSN-----------GTV 103
Query: 277 HIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRA 336
II LSS E+L + I+L+H P+ S ++
Sbjct: 104 EIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEE 163
Query: 337 AFESWFVRYKVDVVFAGHVHAY 358
A E VD+V GH H
Sbjct: 164 ALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 85.6 bits (213), Expect = 7e-21
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 383 SAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGK 442
APV+I VG GN F PQP +SAFR++ YG+ L + NRTH ++ + R+DDG
Sbjct: 1 KAPVHIVVGAAGNGLD---PFPDPQPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDDGT 57
Query: 443 KVATDSF 449
+ DSF
Sbjct: 58 VL--DSF 62
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 1e-09
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 7/87 (8%)
Query: 295 EWLREELKKVDREKTPWL-------IVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKV 347
E L L + P I+L H P Y+ + + + A +Y V
Sbjct: 45 EVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGV 104
Query: 348 DVVFAGHVHAYERSYRISNLHYNISSG 374
D+V +GH H YER I+ G
Sbjct: 105 DLVLSGHTHVYERREPDGGGTLYINPG 131
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 5e-09
Identities = 45/230 (19%), Positives = 70/230 (30%), Gaps = 37/230 (16%)
Query: 176 STLEHYMESGAQTVLFLGDLS---YADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232
+ L + ++ GDL+ + Y+ + + R P I GN
Sbjct: 24 ALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLK---------ELLARLELPAPVIVVPGN 74
Query: 233 HEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYT- 291
H+ GE S L SS W +I L S P V
Sbjct: 75 HDA--RVVNGE---AFSDQFFNRYAVLVGACSSGGW--------RVIGLDSSVPGVPLGR 121
Query: 292 ---PQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY--K 346
Q +WL E L ++VL H P+ + + +
Sbjct: 122 LGAEQLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGND 181
Query: 347 VDVVFAGHVH------AYERSYRISNLHYNISSGDCFPVPDKSAPVYITV 390
V +V +GH+H R+S+L C V SA + T+
Sbjct: 182 VRLVLSGHIHLAAQTVYQLNGTRLSDLLVGAGPATCSQVFRGSATAFNTL 231
|
Length = 301 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 62/321 (19%), Positives = 94/321 (29%), Gaps = 97/321 (30%)
Query: 161 KFGIIGDLG--QTYNSLSTLEHYM-----ESGAQTVLFLGDLSYADRYQFIDVGVRWDSW 213
+F +GD G T + M E G +L LGD F D GV
Sbjct: 2 RFLALGDWGGGGTAGQKAV-AKAMAKVAAELGPDFILSLGD-------NFYDDGVGSVDD 53
Query: 214 GRFVER-------SAAYQPWIWSAGNH--------EIEYMTYMGEVVPFKSYLHRYPTPH 258
RF + PW GNH +I+Y + P
Sbjct: 54 PRFETTFEDVYSAPSLQVPWYLVLGNHDYSGNVSAQIDY-----------TKRPNSPRWT 102
Query: 259 LASKSSSPLWYAIR------RASAHIIVLSSYSPFVKYTP----------------QWEW 296
+ + +Y + + I++ + P + Q W
Sbjct: 103 MPAY-----YYRVSFPFPSSDTTVEFIMIDT-VPLCGNSDDIASPYGPPNGKLAEEQLAW 156
Query: 297 LREELKKVDREKTPWLIVLMHVPIYNS--NEAHFMEGESMRAAFESWFVRYKVDVVFAGH 354
L + L W IV+ H PIY+S + + + + YKVD +GH
Sbjct: 157 LEKTLAAS---TADWKIVVGHHPIYSSGEHGPTSCLVDRLLPLLKK----YKVDAYLSGH 209
Query: 355 VHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFR 414
H NL + D S ++ G G +S F
Sbjct: 210 DH---------NLQHI--------KDDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFT 252
Query: 415 EASYGHSTLEIKNR--THAFY 433
+ G + LE+ T FY
Sbjct: 253 SSGGGFAYLELTKEELTVRFY 273
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163645 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 43/222 (19%), Positives = 68/222 (30%), Gaps = 49/222 (22%)
Query: 189 VLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ-PWIWSAGNHEIEYMTYMGEVVPF 247
VL GDL+ D G +S+ R E AA P GNH+ +
Sbjct: 44 VLVTGDLT--------DDG-SPESYERLRELLAALPIPVYLLPGNHD--------DRAAM 86
Query: 248 KSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSS---------YSPFVKYTPQWEWLR 298
++ P + Y + +I+L S Q +WL
Sbjct: 87 RAVFPELPPAPG------FVQYVVDLGGWRLILLDSSVPGQHGGELCA-----AQLDWLE 135
Query: 299 EELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMR--AAFESWFVRY-KVDVVFAGHV 355
L + + T +V +H P + A M+ +R A + R+ V + GHV
Sbjct: 136 AALAEAPDKPT---LVFLHHPPFPVGIAW-MDAIGLRNAEALAAVLARHPNVRAILCGHV 191
Query: 356 HAYERSYRISNLHYNISSGDCFPVP---DKSAPVYITVGDGG 394
H + + C D A + G
Sbjct: 192 H-RPIDGSWGGIPLLTAPSTCHQFAPDLDDFALDALAPGYRA 232
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 240 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 479 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 100.0 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 100.0 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.97 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.92 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.9 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.88 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.88 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.83 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.77 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.73 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.71 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.69 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.67 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.65 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.64 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.61 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.56 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.54 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.53 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.51 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.47 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.47 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.46 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.46 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.45 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.4 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.37 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.32 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.25 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.19 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.16 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.09 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.05 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.01 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.99 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.96 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.92 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.92 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.9 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.9 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.89 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.88 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.86 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.86 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.77 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.76 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.76 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.74 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.68 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.66 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.64 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.59 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.51 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.49 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.45 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.39 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.38 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.35 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.29 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.28 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.27 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.26 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.19 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.19 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.18 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.15 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.14 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.1 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.09 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.05 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.03 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 97.97 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.87 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.85 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.78 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.73 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.72 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.62 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.56 | |
| PHA02239 | 235 | putative protein phosphatase | 97.55 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.29 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 97.23 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.23 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.21 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.15 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.15 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.12 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.08 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.02 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.0 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 96.94 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 96.91 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.86 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.81 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 96.8 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.79 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 96.79 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.69 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.67 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 96.57 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.53 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 96.52 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.32 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 96.08 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.04 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 96.01 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 95.93 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 95.68 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 95.43 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 94.84 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 94.78 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 94.71 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 94.33 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 94.21 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 93.77 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 93.54 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 93.51 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 93.2 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 93.17 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 93.12 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 93.11 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 92.69 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 92.25 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 91.8 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 91.47 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 89.94 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 89.16 | |
| PF10518 | 26 | TAT_signal: TAT (twin-arginine translocation) path | 87.13 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 84.86 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 80.16 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-78 Score=588.97 Aligned_cols=424 Identities=41% Similarity=0.640 Sum_probs=363.9
Q ss_pred cCCCCCccCCcCCCCCCcCcCCCCcccccCCCCCCCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEeecCCCCc----
Q 011679 24 GGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFD---- 99 (479)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~---- 99 (479)
.+.++.++.+.|...++..++...-++..|...+.|+||||++++.. ++|+|+|.|.+.. ...|+|+...+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~peQvhlS~~~~~-~~m~VswvT~~~~-~~~V~Yg~~~~~~~~~~~ 87 (452)
T KOG1378|consen 10 EINPKHTLHDINPLPGTLHLLSESEQLTFPSVVNSPEQVHLSFTDNL-NEMRVSWVTGDGE-ENVVRYGEVKDKLDNSAA 87 (452)
T ss_pred eccCCCccccccccCcccccccccccccCcccCCCCCeEEEeccCCC-CcEEEEEeCCCCC-CceEEEeecCCCcccccc
Confidence 45566667777776666666666666777888889999999999875 4999999999753 38999998766522
Q ss_pred -eEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCCC-CCceeEEEECCCCCCCCCCeEEEEEecCCCCCCcHHH
Q 011679 100 -FTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSG-DSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLST 177 (479)
Q Consensus 100 -~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~-~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~ 177 (479)
..+.+.+..+...++.++++|+|.+++|+|+|+|||||+++ .||+++.|+|+| ++..+.+|+++||++.......+
T Consensus 88 ~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~s~ 165 (452)
T KOG1378|consen 88 RGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYTST 165 (452)
T ss_pred ccceEEEecccccccceeeeEeeeeecCCCCCceEEEEeCCCCCcccceEeECCC--CccCceeEEEEccccccccccch
Confidence 22333333344445789999999999999999999999987 589999999998 34579999999999999888788
Q ss_pred HHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccccccCCCcccccccccccccc
Q 011679 178 LEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPT 256 (479)
Q Consensus 178 l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
+..+.+. ++|+|||+||++|+++..+ .+||.|.++++++++.+|+|++.||||+++.+.. .|.+|.+||.|
T Consensus 166 ~~~~~~~~k~d~vlhiGDlsYa~~~~n----~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~----~F~~y~~Rf~m 237 (452)
T KOG1378|consen 166 LRNQEENLKPDAVLHIGDLSYAMGYSN----WQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP----CFVPYSARFNM 237 (452)
T ss_pred HhHHhcccCCcEEEEecchhhcCCCCc----cchHHHHhhhhhhhccCceEEecccccccCCCcc----cccccceeecc
Confidence 8887777 5999999999999988632 6899999999999999999999999999865433 68899999999
Q ss_pred CcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCC--CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCC-ccCcCH-
Q 011679 257 PHLASKSSSPLWYAIRRASAHIIVLSSYSPFV--KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEA-HFMEGE- 332 (479)
Q Consensus 257 p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~--~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~-~~~~~~- 332 (479)
|.+++....+.||||++|++|||+|+|+.+++ .+.+|.+||+++|++++|++.||+|+++|.|+|++... +.++++
T Consensus 238 P~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~ 317 (452)
T KOG1378|consen 238 PGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEF 317 (452)
T ss_pred CCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcc
Confidence 99988877789999999999999999988753 46899999999999998776899999999999998875 566666
Q ss_pred -HHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCcc
Q 011679 333 -SMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYS 411 (479)
Q Consensus 333 -~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~ 411 (479)
.++..|++||.+++||++|.||.|+|||++|+++.++...++ +.++.++++|+||++|+||+.++.... ..++|+||
T Consensus 318 ~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~-~~~~~d~~aPvyI~~G~~G~~e~~~~~-~~~~p~~S 395 (452)
T KOG1378|consen 318 ESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWG-PVHLVDGMAPIYITVGDGGNHEHLDPF-SSPQPEWS 395 (452)
T ss_pred hhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCC-cccccCCCCCEEEEEccCCcccccCcc-cCCCCccc
Confidence 788999999999999999999999999999999988776666 788899999999999999999987544 44799999
Q ss_pred ceeeccccEEEEEEecccEEEEEEEEcCCCceeeeeeEEEEecccCChhh
Q 011679 412 AFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRR 461 (479)
Q Consensus 412 ~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g~~~~~D~f~i~~~~~~~~~~ 461 (479)
+||+.+|||++|+++|+||+.++|+++.|++.++.|+|||.|+...+...
T Consensus 396 a~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~ 445 (452)
T KOG1378|consen 396 AFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVG 445 (452)
T ss_pred ccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccccc
Confidence 99999999999999999999999999977766779999999998876654
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-75 Score=589.27 Aligned_cols=406 Identities=40% Similarity=0.685 Sum_probs=338.3
Q ss_pred CCCCCccCCcCCCCCCcCcCCCCcccccCCCCCCCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEe
Q 011679 25 GSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEG 104 (479)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~ 104 (479)
|+.+.+.++.|.+.....++++. ....+..|+||||++++ .++|+|+|.|.+. ..+.|+||++++.++.++.|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~P~qvhls~~~--~~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~g 86 (427)
T PLN02533 14 VLAGNVLSYDRPGTRKNLVIHPD----NEDDPTHPDQVHISLVG--PDKMRISWITQDS-IPPSVVYGTVSGKYEGSANG 86 (427)
T ss_pred hhccCcccccCCCcccccccccc----CCCCCCCCceEEEEEcC--CCeEEEEEECCCC-CCCEEEEecCCCCCcceEEE
Confidence 34445666777644443332211 11355679999999987 3799999999865 46899999999988889999
Q ss_pred EEEEEee-ecceeceEEEEEeCCCCCCCEEEEEeCCCCCceeEEEECCCCCCCCCCeEEEEEecCCCCCCcHHHHHHHHH
Q 011679 105 TVNNYTF-YKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME 183 (479)
Q Consensus 105 ~~~~~~~-~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~ 183 (479)
++.+|.+ ..+.++++|+|+|+||+|+|+|+|||+...+|++++|+|+|. ..+++|+++||+|.......+++++.+
T Consensus 87 ~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~---~~~~~f~v~GDlG~~~~~~~tl~~i~~ 163 (427)
T PLN02533 87 TSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWTKSTLEHVSK 163 (427)
T ss_pred EEEEEeccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCC---CCCeEEEEEEeCCCCcccHHHHHHHHh
Confidence 8888764 235678999999999999999999999877789999999885 368999999999877666678888888
Q ss_pred hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCCCC
Q 011679 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKS 263 (479)
Q Consensus 184 ~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 263 (479)
.+|||||++||++|+++. +.+|+.|.+.++++.+.+|+|+++||||....+.. ....|..|..+|.||....+.
T Consensus 164 ~~pD~vl~~GDl~y~~~~-----~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~-~~~~f~~y~~rf~mP~~~~g~ 237 (427)
T PLN02533 164 WDYDVFILPGDLSYANFY-----QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPIL-HPEKFTAYNARWRMPFEESGS 237 (427)
T ss_pred cCCCEEEEcCccccccch-----HHHHHHHHHHhhhHhhcCceEEeCccccccccccc-cCcCccchhhcccCCccccCC
Confidence 899999999999997643 67899999999999989999999999998643211 223567889999999876555
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCc--CHHHHHHHHHH
Q 011679 264 SSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFME--GESMRAAFESW 341 (479)
Q Consensus 264 ~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l 341 (479)
..+.||+|++|++|||+||++.++....+|++||+++|++++++..+|+|+++|+|+|++...+... ...+++.|+++
T Consensus 238 ~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~L 317 (427)
T PLN02533 238 TSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETL 317 (427)
T ss_pred CCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHH
Confidence 6789999999999999999998877789999999999999877788999999999999876544222 24578899999
Q ss_pred HHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeeccccEE
Q 011679 342 FVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHS 421 (479)
Q Consensus 342 ~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~ 421 (479)
|.+++||++|+||+|.|||++|+++++ + +++||+||++|+||+.++....+..++|+|++|++.+|||+
T Consensus 318 l~~~~VdlvlsGH~H~YeR~~p~~~~~-------~----~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~~ 386 (427)
T PLN02533 318 LYKARVDLVFAGHVHAYERFDRVYQGK-------T----DKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHG 386 (427)
T ss_pred HHHhCCcEEEecceecccccccccCCc-------c----CCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCEE
Confidence 999999999999999999999987643 2 46899999999999998865566778899999999999999
Q ss_pred EEEEecccEEEEEEEEcCCCceeeeeeEEEEecccC
Q 011679 422 TLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWA 457 (479)
Q Consensus 422 ~l~v~~~t~~~~~~~~~~~g~~~~~D~f~i~~~~~~ 457 (479)
+|+|.|.|||.|+|++++|++.++.|+|||.|....
T Consensus 387 ~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~ 422 (427)
T PLN02533 387 QLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTE 422 (427)
T ss_pred EEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccCC
Confidence 999999999999999988887667999999986543
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-46 Score=365.63 Aligned_cols=285 Identities=45% Similarity=0.806 Sum_probs=224.3
Q ss_pred CCCeEEEEEecCCCC-CCcHHHHHHHHH--hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCc
Q 011679 157 DASYKFGIIGDLGQT-YNSLSTLEHYME--SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~-~~~~~~l~~i~~--~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 233 (479)
..++||+++||+|.. .....+++.+.+ .+|||||++||++|+.+... ..+|+.|.+.++++...+|+++++|||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~---~~~~~~~~~~~~~~~~~~P~~~~~GNH 78 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNN---GSRWDTFMRQIEPLASYVPYMVTPGNH 78 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCcc---chhHHHHHHHHHHHHhcCCcEEcCccc
Confidence 468999999999973 456778888887 59999999999999766421 367899999999998899999999999
Q ss_pred ccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC---CCChHHHHHHHHHHhhccCCCCC
Q 011679 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF---VKYTPQWEWLREELKKVDREKTP 310 (479)
Q Consensus 234 D~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~---~~~~~Q~~WL~~~L~~~~~~~~~ 310 (479)
|+........ ...+..++.++........+.||+|++|+++||+|||+... ....+|++||+++|++.++.+.+
T Consensus 79 D~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~ 155 (294)
T cd00839 79 EADYNFSFYK---IKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTP 155 (294)
T ss_pred ccccCCCCcc---cccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCC
Confidence 9864322111 01111123333333344567899999999999999997654 46789999999999987555678
Q ss_pred eEEEEeccccccCCCCccC--cCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEE
Q 011679 311 WLIVLMHVPIYNSNEAHFM--EGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYI 388 (479)
Q Consensus 311 w~Iv~~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i 388 (479)
|+||++|+|+++....... .....++.|.++|++++|+++|+||+|.|+|++|+++++.. +.+..+.+++|++||
T Consensus 156 ~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~---~~~~~~~~~~g~~yi 232 (294)
T cd00839 156 WIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV---GDCNPYSNPKGPVHI 232 (294)
T ss_pred eEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec---cccccccCCCccEEE
Confidence 9999999999987654322 24567889999999999999999999999999999775521 334445678999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCCCceeeeeeEEEEe
Q 011679 389 TVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 453 (479)
Q Consensus 389 ~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g~~~~~D~f~i~~ 453 (479)
++|+||+.+...... .+.++|+++....+||++|++.++|+|.++|+++.+|++ +|+|+|.|
T Consensus 233 v~G~~G~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v--~D~f~i~k 294 (294)
T cd00839 233 VIGAGGNDEGLDPFS-APPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVV--IDSFWIIK 294 (294)
T ss_pred EECCCccccCcCccc-CCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeE--EEEEEEeC
Confidence 999999987642221 123579999999999999999999999999999888976 79999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=310.76 Aligned_cols=291 Identities=19% Similarity=0.216 Sum_probs=227.0
Q ss_pred EEEeecCCCCcEEEEEEcCCC-------CCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 63 HITQGDYDGKAVIISWVTPHE-------PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 63 ~l~~~~~~~~~~~v~W~t~~~-------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
|...+|||.....|.|++.+. +....+||++++++.+.+..|+..+.+ ..+|++|+.++||+|++.|+|
T Consensus 41 ~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a~p----~~dhtv~v~~~gL~P~~~yfY 116 (522)
T COG3540 41 HGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIASP----ELDHTVHVDLRGLSPDQDYFY 116 (522)
T ss_pred cccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccCCc----ccCceEEEeccCCCCCceEEE
Confidence 334446788999999998751 456788999998888888888776644 678999999999999999999
Q ss_pred EeCCC-CCceeEEEECCCCCCCC-CCeEEEEEecCCCCCCcHHHHHHHHHhCCCEEEEcCcccccCccc-----------
Q 011679 136 KIGSG-DSSREFWFQTPPKIDPD-ASYKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQ----------- 202 (479)
Q Consensus 136 rv~~~-~~s~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~y~~~~~----------- 202 (479)
||..+ ..|++++|||+|+++.. .-++|+..+|.+++.+...+++.|.+.+||||||+||+||+++..
T Consensus 117 Rf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~ 196 (522)
T COG3540 117 RFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKN 196 (522)
T ss_pred EEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCcccccccccccc
Confidence 99886 57899999999998765 467888899999998999999999999999999999999998752
Q ss_pred -------------ccccchhhhHHH--HHHHhhhccCCeEEcCCCcccccccCCCccc--c-c----------ccccccc
Q 011679 203 -------------FIDVGVRWDSWG--RFVERSAAYQPWIWSAGNHEIEYMTYMGEVV--P-F----------KSYLHRY 254 (479)
Q Consensus 203 -------------~~~~~~~~~~~~--~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~--~-~----------~~~~~~~ 254 (479)
+.+|+.+|..+. +.++.+++..||+++|++||+.+|+..+... + + .+++.++
T Consensus 197 ~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyy 276 (522)
T COG3540 197 VVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYY 276 (522)
T ss_pred cccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHH
Confidence 123677777664 6789999999999999999998775433211 0 1 1333333
Q ss_pred c-cCcCCCCC--CCCcEEEEEeCC-EEEEEEcCCCCC----------------------CCChHHHHHHHHHHhhccCCC
Q 011679 255 P-TPHLASKS--SSPLWYAIRRAS-AHIIVLSSYSPF----------------------VKYTPQWEWLREELKKVDREK 308 (479)
Q Consensus 255 ~-~p~~~~~~--~~~~yysf~~g~-~~fi~Ldt~~~~----------------------~~~~~Q~~WL~~~L~~~~~~~ 308 (479)
+ ||.+.... ....|++|.+|+ +.|.+||+.... ..|.+|.+||++.|.+ ++
T Consensus 277 E~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---Sk 353 (522)
T COG3540 277 EHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SK 353 (522)
T ss_pred HhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cc
Confidence 3 67664432 367899999998 689999995422 2478999999999999 88
Q ss_pred CCeEEEEeccccccCCC-------------CccCcCHHHHHHHHHHHHHcCcc--EEEeccccccee
Q 011679 309 TPWLIVLMHVPIYNSNE-------------AHFMEGESMRAAFESWFVRYKVD--VVFAGHVHAYER 360 (479)
Q Consensus 309 ~~w~Iv~~H~P~~~~~~-------------~~~~~~~~~~~~l~~l~~~~~Vd--lvlsGH~H~y~r 360 (479)
+.|+|+....|+--... +.|.+...-|++|+.+++..++. ++|+|++|...-
T Consensus 354 atWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~wA 420 (522)
T COG3540 354 ATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSWA 420 (522)
T ss_pred hhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHHH
Confidence 99999999998732111 12334455688999999998875 999999997543
|
|
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=294.95 Aligned_cols=259 Identities=15% Similarity=0.248 Sum_probs=192.2
Q ss_pred CCCeEEEEEecCCCCCCcHHHHHHH----HHh-CCCEEEEcCcccccCcccccccchhhhH-HHHHHHhhh--ccCCeEE
Q 011679 157 DASYKFGIIGDLGQTYNSLSTLEHY----MES-GAQTVLFLGDLSYADRYQFIDVGVRWDS-WGRFVERSA--AYQPWIW 228 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~~~~~l~~i----~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~-~~~~~~~~~--~~~P~~~ 228 (479)
...++|+++||+|.+...+..+++. .+. ++||||.+||++ .+|....+ +.+|+. |.+.+.+.. .++||++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~-Dp~f~~~FE~vY~~~s~~L~~Pwy~ 101 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLN-DPKWKHCFENVYSEESGDMQIPFFT 101 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCcc-chhHHhhHhhhccCcchhhCCCeEE
Confidence 4689999999999866556555443 333 899999999999 66766555 677755 556665554 5789999
Q ss_pred cCCCcccccccCCCccc--------------cc---cccccccccCcCCCCCCCCcEEEE----Ee-------------C
Q 011679 229 SAGNHEIEYMTYMGEVV--------------PF---KSYLHRYPTPHLASKSSSPLWYAI----RR-------------A 274 (479)
Q Consensus 229 v~GNHD~~~~~~~~~~~--------------~~---~~~~~~~~~p~~~~~~~~~~yysf----~~-------------g 274 (479)
++||||+..+...+-.. .| .....+|.||. .||++ .. .
T Consensus 102 vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f~~~~~~~~~~~~~~~~ 173 (394)
T PTZ00422 102 VLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHFTDTSGPSLLKSGHKDM 173 (394)
T ss_pred eCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeeeecccccccccccCCCC
Confidence 99999996543321100 00 01236888884 57754 11 2
Q ss_pred CEEEEEEcCCCC-----CC-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCcc
Q 011679 275 SAHIIVLSSYSP-----FV-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD 348 (479)
Q Consensus 275 ~~~fi~Ldt~~~-----~~-~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~Vd 348 (479)
.+.||+|||..- +. ....|++||+++|+.+ ++.++|+||++|||+|+++.++ +...++..|+|||++|+||
T Consensus 174 ~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~hg--~~~~L~~~L~PLL~ky~Vd 250 (394)
T PTZ00422 174 SVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSSK--GDSYLSYYLLPLLKDAQVD 250 (394)
T ss_pred EEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCCC--CCHHHHHHHHHHHHHcCcC
Confidence 389999999531 11 2468999999999653 2567899999999999988643 4467889999999999999
Q ss_pred EEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeeccccEEEEEEecc
Q 011679 349 VVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNR 428 (479)
Q Consensus 349 lvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~ 428 (479)
++||||+|+|||..+ +++.||++|+||+..+.. ...++++.|....+||+.+++ +.
T Consensus 251 lYisGHDH~lq~i~~-------------------~gt~yIvSGaGs~~~~~~----~~~~~~s~F~~~~~GF~~~~l-~~ 306 (394)
T PTZ00422 251 LYISGYDRNMEVLTD-------------------EGTAHINCGSGGNSGRKS----IMKNSKSLFYSEDIGFCIHEL-NA 306 (394)
T ss_pred EEEEccccceEEecC-------------------CCceEEEeCccccccCCC----CCCCCCcceecCCCCEEEEEE-ec
Confidence 999999999999752 468899999998865421 123458889888999999998 66
Q ss_pred cEEEEEEEEcCCCceeeeeeEEEEec
Q 011679 429 THAFYHWNRNDDGKKVATDSFILHNQ 454 (479)
Q Consensus 429 t~~~~~~~~~~~g~~~~~D~f~i~~~ 454 (479)
+.+.++|+.+.+|++ ++++++.++
T Consensus 307 ~~l~~~fid~~~Gkv--L~~~~~~~~ 330 (394)
T PTZ00422 307 EGMVTKFVSGNTGEV--LYTHKQPLK 330 (394)
T ss_pred CEEEEEEEeCCCCcE--EEEeeeccc
Confidence 679999997678987 699888654
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=273.45 Aligned_cols=247 Identities=21% Similarity=0.377 Sum_probs=176.2
Q ss_pred eEEEEEecCCCC-CCcHH----HHHHHHH-hCCCEEEEcCcccccCcccccccchhh-hHHHHHHHhhhccCCeEEcCCC
Q 011679 160 YKFGIIGDLGQT-YNSLS----TLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRW-DSWGRFVERSAAYQPWIWSAGN 232 (479)
Q Consensus 160 ~~f~~~gD~~~~-~~~~~----~l~~i~~-~~pd~vl~~GD~~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~~~v~GN 232 (479)
++|+++||++.. ...+. .+.++++ .+|||||++||++|+++..... ..+| +.|.+.++.+..++|+++++||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~-~~~~~~~~~~~~~~~~~~~P~~~v~GN 79 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVD-DPRFETTFEDVYSAPSLQVPWYLVLGN 79 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCc-chHHHHHHHHHccchhhcCCeEEecCC
Confidence 589999999986 23222 2334444 3999999999999988754332 3334 3455555555457899999999
Q ss_pred cccccccCCCccccccc--cccccccCcCCCCCCCCcEEEEEeC------CEEEEEEcCCCCC---------------CC
Q 011679 233 HEIEYMTYMGEVVPFKS--YLHRYPTPHLASKSSSPLWYAIRRA------SAHIIVLSSYSPF---------------VK 289 (479)
Q Consensus 233 HD~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~yysf~~g------~~~fi~Ldt~~~~---------------~~ 289 (479)
||+..+.. ....+.. +..+|.+| ..||+|+++ +++||+|||.... ..
T Consensus 80 HD~~~~~~--~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T cd07378 80 HDYSGNVS--AQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKL 149 (277)
T ss_pred cccCCCch--heeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhh
Confidence 99863211 1111111 12333343 478999998 7999999996421 13
Q ss_pred ChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcc
Q 011679 290 YTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHY 369 (479)
Q Consensus 290 ~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~ 369 (479)
+.+|++||+++|++. ..+|+||++|||+++..... .....++.|.+++++++|+++|+||+|.+++..+
T Consensus 150 ~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~------ 218 (277)
T cd07378 150 AEEQLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKD------ 218 (277)
T ss_pred HHHHHHHHHHHHHhc---CCCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeeec------
Confidence 579999999999984 34899999999999765432 2256788999999999999999999999998763
Q ss_pred cccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCCC
Q 011679 370 NISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDG 441 (479)
Q Consensus 370 ~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g 441 (479)
...++.||++|+||...+.........|.|..++...+||++|+|.+ +.+.++|+. .||
T Consensus 219 -----------~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~-~~l~~~~~~-~~g 277 (277)
T cd07378 219 -----------DGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTK-EELTVRFYD-ADG 277 (277)
T ss_pred -----------CCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEec-CEEEEEEEC-CCC
Confidence 13578999999988876543222222345788888999999999964 468899874 444
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=290.97 Aligned_cols=288 Identities=21% Similarity=0.313 Sum_probs=160.9
Q ss_pred ecCCCCcEEEEEEcCCC--------CCCCEEE--EeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 67 GDYDGKAVIISWVTPHE--------PGPSTVS--YGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 67 ~~~~~~~~~v~W~t~~~--------~~~~~v~--y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
.|||..+.+|.|++... .....|+ +.+.+++...+..+...+- ...+|+++|+|+||+|+|+|+||
T Consensus 5 sGdp~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~~----~~~d~t~~v~v~gL~p~t~Y~Y~ 80 (453)
T PF09423_consen 5 SGDPTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTTT----AERDFTVKVDVTGLQPGTRYYYR 80 (453)
T ss_dssp EE---SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EEEEE
T ss_pred ccCCCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceecc----cCCCeEeecccCCCCCCceEEEE
Confidence 35688899999998765 1133444 4444454555666665442 36789999999999999999999
Q ss_pred eCCC---CCceeEEEECCCCCCCCCCeEEEEEecCCCCCCcHHHHHHHHH-hCCCEEEEcCcccccCcc-----------
Q 011679 137 IGSG---DSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME-SGAQTVLFLGDLSYADRY----------- 201 (479)
Q Consensus 137 v~~~---~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~-~~pd~vl~~GD~~y~~~~----------- 201 (479)
|... ..|++++|||+|... ...+||+++||.+.......+++++++ .+|||+||+||++|++..
T Consensus 81 ~~~~~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~ 159 (453)
T PF09423_consen 81 FVVDGGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPI 159 (453)
T ss_dssp EEE--TTEE---EEEE--TT------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S
T ss_pred EEEecCCCCCCceEEEcCCCCC-CCceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCccccccccccc
Confidence 9873 568999999996542 357999999999987777889999999 499999999999999852
Q ss_pred -----------cccccchhhhHHH--HHHHhhhccCCeEEcCCCcccccccCCCccc-------cc-----cccccccc-
Q 011679 202 -----------QFIDVGVRWDSWG--RFVERSAAYQPWIWSAGNHEIEYMTYMGEVV-------PF-----KSYLHRYP- 255 (479)
Q Consensus 202 -----------~~~~~~~~~~~~~--~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~-------~~-----~~~~~~~~- 255 (479)
...+|+.+|..+. ..++.+++++|++++|++||+.+|....... .+ .+++.++.
T Consensus 160 ~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~ 239 (453)
T PF09423_consen 160 GRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEY 239 (453)
T ss_dssp -----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhh
Confidence 0112334444432 4577788899999999999997654421110 01 12222221
Q ss_pred cCcCC---CCCCCCcEEEEEeCC-EEEEEEcCCCCC---------------------CCChHHHHHHHHHHhhccCCCCC
Q 011679 256 TPHLA---SKSSSPLWYAIRRAS-AHIIVLSSYSPF---------------------VKYTPQWEWLREELKKVDREKTP 310 (479)
Q Consensus 256 ~p~~~---~~~~~~~yysf~~g~-~~fi~Ldt~~~~---------------------~~~~~Q~~WL~~~L~~~~~~~~~ 310 (479)
+|.+. .......|++|++|+ +.|++||++... .+|.+|++||++.|++ +.++
T Consensus 240 ~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~ 316 (453)
T PF09423_consen 240 QPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQAT 316 (453)
T ss_dssp S---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SS
T ss_pred cCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc---CCCc
Confidence 33321 122356799999999 999999995321 2478999999999998 6689
Q ss_pred eEEEEeccccccCCC-----------CccCcCHHHHHHHHHHHHHcCcc--EEEecccccceeee
Q 011679 311 WLIVLMHVPIYNSNE-----------AHFMEGESMRAAFESWFVRYKVD--VVFAGHVHAYERSY 362 (479)
Q Consensus 311 w~Iv~~H~P~~~~~~-----------~~~~~~~~~~~~l~~l~~~~~Vd--lvlsGH~H~y~r~~ 362 (479)
|+||+.-.|+..... ..|......|++|.++|.+.++. ++|+|++|...-..
T Consensus 317 ~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~ 381 (453)
T PF09423_consen 317 WKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASR 381 (453)
T ss_dssp EEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEE
T ss_pred EEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeee
Confidence 999999888754332 23455677899999999988775 88999999976654
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=231.24 Aligned_cols=263 Identities=19% Similarity=0.269 Sum_probs=175.5
Q ss_pred CCCCeEEEEEecCCCCCCcHHH-----HHHHHHh-CCCEEEEcCcccccCcccccccchhh-hHHHHHHHhhhccCCeEE
Q 011679 156 PDASYKFGIIGDLGQTYNSLST-----LEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRW-DSWGRFVERSAAYQPWIW 228 (479)
Q Consensus 156 ~~~~~~f~~~gD~~~~~~~~~~-----l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~~~ 228 (479)
+++.++|+++||++......+. +..|.+. +.||||.+||++|.+|..... +.++ +.|.+.+..-.-+.|||.
T Consensus 40 ~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~-Dp~Fq~sF~nIYT~pSLQkpWy~ 118 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSEN-DPRFQDSFENIYTAPSLQKPWYS 118 (336)
T ss_pred CCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCC-ChhHHhhhhhcccCcccccchhh
Confidence 4689999999999976543322 2233333 999999999999999876544 4444 334444444344679999
Q ss_pred cCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEE------EEeCCEEEEEEcCCCC-------C-C------
Q 011679 229 SAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYA------IRRASAHIIVLSSYSP-------F-V------ 288 (479)
Q Consensus 229 v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yys------f~~g~~~fi~Ldt~~~-------~-~------ 288 (479)
+.||||+..|-..+-..-+.....||..|. .||. +..-++.++++|+... + +
T Consensus 119 vlGNHDyrGnV~AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~ 190 (336)
T KOG2679|consen 119 VLGNHDYRGNVEAQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVK 190 (336)
T ss_pred hccCccccCchhhhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheecccccccccccCChHHH
Confidence 999999976533222112445556666553 1211 0111344445444211 1 0
Q ss_pred CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCc
Q 011679 289 KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLH 368 (479)
Q Consensus 289 ~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~ 368 (479)
....|+.||+..|++ +.++|+||++|||+.+.+.+ +...++.++|.|+|++++||++++||+|+.|+..-
T Consensus 191 ~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~H--G~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis~----- 260 (336)
T KOG2679|consen 191 YLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHH--GPTKELEKQLLPILEANGVDLYINGHDHCLQHISS----- 260 (336)
T ss_pred HHHHHHHHHHHHHHH---hhcceEEEecccceehhhcc--CChHHHHHHHHHHHHhcCCcEEEecchhhhhhccC-----
Confidence 125789999999999 78999999999999987764 35578899999999999999999999999998641
Q ss_pred ccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCC-CCCCCccceeeccccEEEEEEecccEEEEEEEEcCCCceeeee
Q 011679 369 YNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFR-YPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATD 447 (479)
Q Consensus 369 ~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~-~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g~~~~~D 447 (479)
...++-|+++|+|... +...... ...|+...|....-||+.+++ ....+++.|+. ..|++ ..
T Consensus 261 ------------~e~~iqf~tSGagSka-w~g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~e~~vvfyD-~~G~~--Lh 323 (336)
T KOG2679|consen 261 ------------PESGIQFVTSGAGSKA-WRGTDHNPEVNPKELKFYYDGQGFMSVEI-SHSEARVVFYD-VSGKV--LH 323 (336)
T ss_pred ------------CCCCeeEEeeCCcccc-cCCCccCCccChhheEEeeCCCceEEEEE-ecceeEEEEEe-ccCce--EE
Confidence 1245667777765543 2211211 234555677777789999999 45668888886 46886 35
Q ss_pred eEEEEec
Q 011679 448 SFILHNQ 454 (479)
Q Consensus 448 ~f~i~~~ 454 (479)
.....|+
T Consensus 324 k~~t~kr 330 (336)
T KOG2679|consen 324 KWSTSKR 330 (336)
T ss_pred Eeecccc
Confidence 5444433
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-27 Score=225.21 Aligned_cols=229 Identities=17% Similarity=0.199 Sum_probs=158.4
Q ss_pred CCeEEEEEecCCCCCC--c---------------HHHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHH
Q 011679 158 ASYKFGIIGDLGQTYN--S---------------LSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVE 218 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~--~---------------~~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~ 218 (479)
++++|+++||+|.+.. . ..+++.+.+. +|||||++||+++....... ...+|+.+.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~-~~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDEL-RERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhh-HHHHHHHHHHHHh
Confidence 5899999999998731 1 2234455555 89999999999976443211 1234556666666
Q ss_pred hhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC------CCChH
Q 011679 219 RSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF------VKYTP 292 (479)
Q Consensus 219 ~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~------~~~~~ 292 (479)
.+...+|+++++||||+...+.. ..+..|...| ...||+|++|+++||+|||.... ....+
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~~---~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~ 148 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPTE---ESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQA 148 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCCh---hHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHH
Confidence 66567899999999998532111 1112232222 23588999999999999995422 23578
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeccccccCCCCcc----CcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCc
Q 011679 293 QWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHF----MEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLH 368 (479)
Q Consensus 293 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~----~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~ 368 (479)
|++||+++|+++.+.+.+++||++|+|++....... ......+.++.++|++++|+++||||+|.+.+..
T Consensus 149 ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~------ 222 (262)
T cd07395 149 QDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR------ 222 (262)
T ss_pred HHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE------
Confidence 999999999986434567899999999986443211 1234567899999999999999999999987643
Q ss_pred ccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEE
Q 011679 369 YNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWN 436 (479)
Q Consensus 369 ~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~ 436 (479)
.+++.++++++.|.... ....||..++++.+. +++||+
T Consensus 223 -------------~~g~~~~~~~~~~~~~~----------------~~~~g~~~~~v~~~~-~~~~~~ 260 (262)
T cd07395 223 -------------YGGLEMVVTSAIGAQLG----------------NDKSGLRIVKVTEDK-IVHEYY 260 (262)
T ss_pred -------------ECCEEEEEcCceecccC----------------CCCCCcEEEEECCCc-eeeeee
Confidence 13566788877765321 123789999995444 577775
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-24 Score=200.46 Aligned_cols=215 Identities=20% Similarity=0.224 Sum_probs=146.2
Q ss_pred EEEEEecCCCCCCc-------------HHHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCC
Q 011679 161 KFGIIGDLGQTYNS-------------LSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQP 225 (479)
Q Consensus 161 ~f~~~gD~~~~~~~-------------~~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P 225 (479)
||+++||+|.+... .+.++.+.+. +||+||++||++.... ...|+.+.+.++.+ .+|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~~--~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS------PESYERLRELLAAL--PIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC------HHHHHHHHHHHhhc--CCC
Confidence 69999999987531 2234555555 8999999999997532 23445555556554 689
Q ss_pred eEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC----CCChHHHHHHHHHH
Q 011679 226 WIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF----VKYTPQWEWLREEL 301 (479)
Q Consensus 226 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~----~~~~~Q~~WL~~~L 301 (479)
++.++||||.... +...|..... .....+|+|+.++++||+||+.... ....+|++||++.|
T Consensus 73 ~~~v~GNHD~~~~-----------~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L 138 (240)
T cd07402 73 VYLLPGNHDDRAA-----------MRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAAL 138 (240)
T ss_pred EEEeCCCCCCHHH-----------HHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHH
Confidence 9999999998421 1111111000 1234678999999999999986432 13578999999999
Q ss_pred hhccCCCCCeEEEEeccccccCCCCccC-cCHHHHHHHHHHHHHc-CccEEEecccccceeeeeccCCcccccCCccccc
Q 011679 302 KKVDREKTPWLIVLMHVPIYNSNEAHFM-EGESMRAAFESWFVRY-KVDVVFAGHVHAYERSYRISNLHYNISSGDCFPV 379 (479)
Q Consensus 302 ~~~~~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~ 379 (479)
++.. .+++|+++|+|++........ .....++++.+++.++ +++++||||+|......
T Consensus 139 ~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~----------------- 198 (240)
T cd07402 139 AEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS----------------- 198 (240)
T ss_pred HhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE-----------------
Confidence 9852 456899999999765431100 1112367889999999 99999999999975543
Q ss_pred CCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeeccccEEEEEEe
Q 011679 380 PDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIK 426 (479)
Q Consensus 380 ~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~ 426 (479)
.+++.++++|+.|.... +.++..++.+..+||..+++.
T Consensus 199 --~~g~~~~~~gs~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 236 (240)
T cd07402 199 --WGGIPLLTAPSTCHQFA-------PDLDDFALDALAPGYRALSLH 236 (240)
T ss_pred --ECCEEEEEcCcceeeec-------CCCCcccccccCCCCcEEEEe
Confidence 25577888888776532 122344444556788888774
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.4e-23 Score=197.97 Aligned_cols=196 Identities=21% Similarity=0.272 Sum_probs=130.1
Q ss_pred eEEEEEecCCCCCC----------c----HHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCC
Q 011679 160 YKFGIIGDLGQTYN----------S----LSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQP 225 (479)
Q Consensus 160 ~~f~~~gD~~~~~~----------~----~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P 225 (479)
|||+++||+|.... . ..+++.+.+.+||+||++||+++..... . ...|+.+.+.++.+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~--~-~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNAR--A-EEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCch--H-HHHHHHHHHHHHhc--CCC
Confidence 69999999995532 1 1234455555899999999999643311 0 23444444444443 589
Q ss_pred eEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCC-------------------
Q 011679 226 WIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP------------------- 286 (479)
Q Consensus 226 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~------------------- 286 (479)
+++++||||...... .+.. .. ........||+|+.++++||+||+...
T Consensus 76 ~~~v~GNHD~~~~~~--------~~~~-~~----~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~ 142 (267)
T cd07396 76 VHHVLGNHDLYNPSR--------EYLL-LY----TLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNS 142 (267)
T ss_pred EEEecCccccccccH--------hhhh-cc----cccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhc
Confidence 999999999863210 0100 00 001234579999999999999999531
Q ss_pred ---------------CCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHc-CccEE
Q 011679 287 ---------------FVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVDVV 350 (479)
Q Consensus 287 ---------------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~Vdlv 350 (479)
.....+|++||+++|++... ...++||++|+|++...... ......++.+.++++++ +|+++
T Consensus 143 ~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~v 220 (267)
T cd07396 143 NLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKAC 220 (267)
T ss_pred hhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEEE
Confidence 02347999999999998532 23568999999987654311 11112356788999995 89999
Q ss_pred EecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCC
Q 011679 351 FAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGG 394 (479)
Q Consensus 351 lsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG 394 (479)
||||+|.++... .+|+.|+++|+-.
T Consensus 221 ~~GH~H~~~~~~-------------------~~gi~~~~~~a~~ 245 (267)
T cd07396 221 ISGHDHEGGYAQ-------------------RHGIHFLTLEGMV 245 (267)
T ss_pred EcCCcCCCCccc-------------------cCCeeEEEechhh
Confidence 999999986432 2567788887654
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=186.43 Aligned_cols=189 Identities=16% Similarity=0.198 Sum_probs=122.7
Q ss_pred EEEEecCCCCCCcHH--------HHHHHHHhCCCEEEEcCcccccCccc---ccccchhhhHHHHHHHhhhc--cCCeEE
Q 011679 162 FGIIGDLGQTYNSLS--------TLEHYMESGAQTVLFLGDLSYADRYQ---FIDVGVRWDSWGRFVERSAA--YQPWIW 228 (479)
Q Consensus 162 f~~~gD~~~~~~~~~--------~l~~i~~~~pd~vl~~GD~~y~~~~~---~~~~~~~~~~~~~~~~~~~~--~~P~~~ 228 (479)
|++++|+|.+....+ .++.+.+.+||+||++||++...... ......+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 789999998753211 23344455999999999999643211 11124567777766655433 589999
Q ss_pred cCCCcccccccCCCcc-ccccccccccccCcCCCCCCCCcEEEE--EeCCEEEEEEcCCCC----------CCCChHHHH
Q 011679 229 SAGNHEIEYMTYMGEV-VPFKSYLHRYPTPHLASKSSSPLWYAI--RRASAHIIVLSSYSP----------FVKYTPQWE 295 (479)
Q Consensus 229 v~GNHD~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~yysf--~~g~~~fi~Ldt~~~----------~~~~~~Q~~ 295 (479)
++||||+......... ..|..|...+ + ....+|.+ ..|+++||+|||... .....+|++
T Consensus 82 v~GNHD~~~~~~~~~~~~~~~~y~~~~-~-------~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~ 153 (256)
T cd07401 82 IRGNHDLFNIPSLDSENNYYRKYSATG-R-------DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLD 153 (256)
T ss_pred eCCCCCcCCCCCccchhhHHHHhheec-C-------CCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHH
Confidence 9999999532221111 1111121111 1 11223333 359999999999632 123589999
Q ss_pred HHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeec
Q 011679 296 WLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRI 364 (479)
Q Consensus 296 WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~ 364 (479)
||++.|++. .+.+++||++|+|+....... ....+ .+.++|++++|+++||||+|.+++..|+
T Consensus 154 wL~~~L~~~--~~~~~~IV~~HhP~~~~~~~~---~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 154 RLEKELEKS--TNSNYTIWFGHYPTSTIISPS---AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred HHHHHHHhc--ccCCeEEEEEcccchhccCCC---cchhH-HHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 999999975 345689999999996533211 11222 3899999999999999999999997775
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-21 Score=184.43 Aligned_cols=234 Identities=17% Similarity=0.192 Sum_probs=139.6
Q ss_pred EECCCCCCCCCCeEEEEEecCCCCCC---------c----HHHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhH
Q 011679 148 FQTPPKIDPDASYKFGIIGDLGQTYN---------S----LSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDS 212 (479)
Q Consensus 148 f~T~p~~~~~~~~~f~~~gD~~~~~~---------~----~~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~ 212 (479)
.+|.+.. ..+++|++++|+|.... . .++++++.+. +|||||++||++.... ...++.
T Consensus 5 ~~~~~~~--~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~------~~~~~~ 76 (275)
T PRK11148 5 LTLPLAG--EARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS------SEAYQH 76 (275)
T ss_pred cccccCC--CCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC------HHHHHH
Confidence 3454432 46899999999996321 1 2234455444 6999999999996421 233444
Q ss_pred HHHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC----C
Q 011679 213 WGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF----V 288 (479)
Q Consensus 213 ~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~----~ 288 (479)
+.+.++.+ ..|+++++||||.... +..+.....+ ...++.+..++++||+||+.... .
T Consensus 77 ~~~~l~~l--~~Pv~~v~GNHD~~~~--------~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~~~G~ 138 (275)
T PRK11148 77 FAEGIAPL--RKPCVWLPGNHDFQPA--------MYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGVPHGE 138 (275)
T ss_pred HHHHHhhc--CCcEEEeCCCCCChHH--------HHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCCcCCE
Confidence 44555544 5899999999998421 0111111111 11233344557999999995421 2
Q ss_pred CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCc--CHHHHHHHHHHHHHc-CccEEEecccccceeeeecc
Q 011679 289 KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFME--GESMRAAFESWFVRY-KVDVVFAGHVHAYERSYRIS 365 (479)
Q Consensus 289 ~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~ 365 (479)
.+.+|++||+++|++. +.+..||++|||+...... +.+ .....+++.++++++ +|+++||||+|......
T Consensus 139 l~~~ql~wL~~~L~~~---~~~~~vv~~hH~P~~~~~~-~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~--- 211 (275)
T PRK11148 139 LSEYQLEWLERKLADA---PERHTLVLLHHHPLPAGCA-WLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDLD--- 211 (275)
T ss_pred eCHHHHHHHHHHHhhC---CCCCeEEEEcCCCCCCCcc-hhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhce---
Confidence 3589999999999985 2334667677655443321 111 112346899999998 89999999999854321
Q ss_pred CCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEE
Q 011679 366 NLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNR 437 (479)
Q Consensus 366 ~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~ 437 (479)
.+|+.++++++.+..... ..+.+ .......||..+++.++..+..+..+
T Consensus 212 ----------------~~gi~~~~~ps~~~q~~~------~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~ 260 (275)
T PRK11148 212 ----------------WNGRRLLATPSTCVQFKP------HCTNF-TLDTVAPGWRELELHADGSLETEVHR 260 (275)
T ss_pred ----------------ECCEEEEEcCCCcCCcCC------CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEE
Confidence 255667777766543211 01111 11233468999998654444444444
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.1e-20 Score=170.59 Aligned_cols=150 Identities=20% Similarity=0.247 Sum_probs=108.3
Q ss_pred eEEEEEecCCCCCCc-----HHHHHHH----HHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh-ccCCeEEc
Q 011679 160 YKFGIIGDLGQTYNS-----LSTLEHY----MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-AYQPWIWS 229 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~-----~~~l~~i----~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~v 229 (479)
|||++++|+|..... ...++.+ .+.+||+||++||++..... ..+|+.+.+.++.+. ..+|++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~-----~~~~~~~~~~~~~l~~~~~p~~~~ 75 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDN-----DAEWEAADKAFARLDKAGIPYSVL 75 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCC-----HHHHHHHHHHHHHHHHcCCcEEEE
Confidence 689999999986432 1222333 33489999999999975431 356778888888886 57999999
Q ss_pred CCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCC
Q 011679 230 AGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKT 309 (479)
Q Consensus 230 ~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~ 309 (479)
+||||. ++.+|+. ...+|++||++.|++. +.
T Consensus 76 ~GNHD~------------------------------------------~~~ld~~----~~~~ql~WL~~~L~~~---~~ 106 (214)
T cd07399 76 AGNHDL------------------------------------------VLALEFG----PRDEVLQWANEVLKKH---PD 106 (214)
T ss_pred CCCCcc------------------------------------------hhhCCCC----CCHHHHHHHHHHHHHC---CC
Confidence 999993 1222221 3479999999999984 34
Q ss_pred CeEEEEeccccccCCCCccCc-----CHHHHHHHHHHHHHc-CccEEEecccccceeeee
Q 011679 310 PWLIVLMHVPIYNSNEAHFME-----GESMRAAFESWFVRY-KVDVVFAGHVHAYERSYR 363 (479)
Q Consensus 310 ~w~Iv~~H~P~~~~~~~~~~~-----~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~ 363 (479)
+++||++|+|++......... ....++.|.++++++ +|+++||||+|.+.+...
T Consensus 107 ~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 107 RPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred CCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 569999999998654322111 123456788999998 799999999999987753
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-18 Score=168.15 Aligned_cols=195 Identities=18% Similarity=0.233 Sum_probs=124.7
Q ss_pred EEecCCCCCC---cHHHHHHHHHh--CCCEEEEcCcccccCccccccc-ch--hhhHHHHHHHhhhccCCeEEcCCCccc
Q 011679 164 IIGDLGQTYN---SLSTLEHYMES--GAQTVLFLGDLSYADRYQFIDV-GV--RWDSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 164 ~~gD~~~~~~---~~~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~-~~--~~~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
.+|+.+.... ...+++.+.+. +|||||++||++..+....... .. .+..+.+.++.....+|+++++||||.
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~ 121 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDS 121 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCC
Confidence 3555554433 24556777777 8999999999998765422110 01 133444556666678999999999998
Q ss_pred ccccCCC----ccccccccccccc--cCcCCC-CCCCCcEEEEE-eCCEEEEEEcCCCCC-----------CCChHHHHH
Q 011679 236 EYMTYMG----EVVPFKSYLHRYP--TPHLAS-KSSSPLWYAIR-RASAHIIVLSSYSPF-----------VKYTPQWEW 296 (479)
Q Consensus 236 ~~~~~~~----~~~~~~~~~~~~~--~p~~~~-~~~~~~yysf~-~g~~~fi~Ldt~~~~-----------~~~~~Q~~W 296 (479)
....... ....+..+...|. +|.... ....+.||++. .+++++|+|||.... ....+|++|
T Consensus 122 ~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~W 201 (296)
T cd00842 122 YPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQW 201 (296)
T ss_pred CcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHH
Confidence 6322111 0111122222222 232111 11235789998 789999999995321 124789999
Q ss_pred HHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcC--ccEEEecccccceeee
Q 011679 297 LREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYK--VDVVFAGHVHAYERSY 362 (479)
Q Consensus 297 L~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--VdlvlsGH~H~y~r~~ 362 (479)
|+++|+++++.. ..++|++|+|+....... .....+++.+++++|. |.++|+||+|..+-..
T Consensus 202 L~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 202 LEDELQEAEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFRV 265 (296)
T ss_pred HHHHHHHHHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEEE
Confidence 999999864333 457889999997644321 1355788999999997 7789999999976543
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-18 Score=153.11 Aligned_cols=189 Identities=21% Similarity=0.231 Sum_probs=99.5
Q ss_pred eEEEEEecCCCCCCcH----HHHH-HHHHhCCCEEEEcCcccccCcccccccchhhhHHH-HHHHhhhccCCeEEcCCCc
Q 011679 160 YKFGIIGDLGQTYNSL----STLE-HYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWG-RFVERSAAYQPWIWSAGNH 233 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~----~~l~-~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~~~v~GNH 233 (479)
|||+++||+|...... ..+. ...+.++|+||++||+++..... ..+.... ..........|+++++|||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPS-----EEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHH-----HHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeecccccccccc-----ccchhhhccchhhhhcccccccccccc
Confidence 6999999999986543 2222 23334999999999999865431 1111111 1233445678999999999
Q ss_pred ccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCCh---HHHHHHHHHHhhccCCCCC
Q 011679 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYT---PQWEWLREELKKVDREKTP 310 (479)
Q Consensus 234 D~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~---~Q~~WL~~~L~~~~~~~~~ 310 (479)
|+......................... ...+......................... .+..|+...+.. ...+
T Consensus 76 D~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 150 (200)
T PF00149_consen 76 DYYSGNSFYGFYDYQFEDYYGNYNYYY--SYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEA---KNDD 150 (200)
T ss_dssp SSHHHHHHHHHHHHHHSSEEECSSEEE--CTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHE---EEES
T ss_pred ccceecccccccccccccccccccccc--ccCcceeeecccccccccccccccccccccchhccccccccccc---cccc
Confidence 996421110000000000000000000 00000011112222222222111111122 233333333333 4567
Q ss_pred eEEEEeccccccCCCCccC--cCHHHHHHHHHHHHHcCccEEEecccccc
Q 011679 311 WLIVLMHVPIYNSNEAHFM--EGESMRAAFESWFVRYKVDVVFAGHVHAY 358 (479)
Q Consensus 311 w~Iv~~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~VdlvlsGH~H~y 358 (479)
++||++|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 151 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 151 PVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9999999999977653211 11235678899999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.1e-17 Score=153.41 Aligned_cols=169 Identities=21% Similarity=0.281 Sum_probs=105.9
Q ss_pred HHHHHHHh-CCCEEEEcCcccccCcccccccchhhhH-HHHHHHhh---hccCCeEEcCCCcccccccCCCccccccccc
Q 011679 177 TLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDS-WGRFVERS---AAYQPWIWSAGNHEIEYMTYMGEVVPFKSYL 251 (479)
Q Consensus 177 ~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~-~~~~~~~~---~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~ 251 (479)
.+..+.+. +||+||++||++..... .. ..+|.. +.++.+.+ ....|++.++||||+...... .......|.
T Consensus 36 ~~~~~~~~l~PD~vv~lGDL~d~G~~-~~--~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~-~~~~~~rf~ 111 (257)
T cd08163 36 NWRYMQKQLKPDSTIFLGDLFDGGRD-WA--DEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGV-VLPVRQRFE 111 (257)
T ss_pred HHHHHHHhcCCCEEEEecccccCCee-Cc--HHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCC-CHHHHHHHH
Confidence 34445444 89999999999875321 11 344532 33333333 224799999999998542211 111123344
Q ss_pred cccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC-----CCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCC
Q 011679 252 HRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF-----VKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEA 326 (479)
Q Consensus 252 ~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~ 326 (479)
..|. ..++.+++|+++||+||+.... ....+|.+||++.|+... ....+||++|+|+|.....
T Consensus 112 ~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~--~~~p~ILl~H~Plyr~~~~ 179 (257)
T cd08163 112 KYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV--KSKPRILLTHVPLYRPPNT 179 (257)
T ss_pred HHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC--CCCcEEEEeccccccCCCC
Confidence 4442 2357899999999999995322 234679999999988642 3345899999999865432
Q ss_pred ccC---c---------CHH----H-HHHHHHHHHHcCccEEEecccccceee
Q 011679 327 HFM---E---------GES----M-RAAFESWFVRYKVDVVFAGHVHAYERS 361 (479)
Q Consensus 327 ~~~---~---------~~~----~-~~~l~~l~~~~~VdlvlsGH~H~y~r~ 361 (479)
.++ + +.. + .+.-..|+++.++.+||+||+|.|=.+
T Consensus 180 ~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 180 SCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred CCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 111 0 000 1 123346677779999999999998554
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.8e-16 Score=147.97 Aligned_cols=176 Identities=20% Similarity=0.220 Sum_probs=107.2
Q ss_pred EEEEecCCCCC--------Cc---HHHHHHHHHh------CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-c
Q 011679 162 FGIIGDLGQTY--------NS---LSTLEHYMES------GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-Y 223 (479)
Q Consensus 162 f~~~gD~~~~~--------~~---~~~l~~i~~~------~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~ 223 (479)
+.+++|+|... .. .+.++.+.+. +||+||++||++..... +.+.+.++.+.+ .
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~---------~~~~~~l~~l~~l~ 71 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKL---------EEAKLDLAWIDALP 71 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCCh---------HHHHHHHHHHHhCC
Confidence 35789999763 11 3445555554 99999999999843211 222233332322 3
Q ss_pred CCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCC----CC------------
Q 011679 224 QPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYS----PF------------ 287 (479)
Q Consensus 224 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~----~~------------ 287 (479)
.|+++++||||+... .. ..+.+.+ +..+.... ...++.++++.|++++... ..
T Consensus 72 ~~v~~V~GNHD~~~~----~~---~~~~~~l--~~~~~~~~--~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~ 140 (232)
T cd07393 72 GTKVLLKGNHDYWWG----SA---SKLRKAL--EESRLALL--FNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEED 140 (232)
T ss_pred CCeEEEeCCccccCC----CH---HHHHHHH--HhcCeEEe--ccCcEEECCEEEEEEEeeCCCCCccccccccccchhH
Confidence 479999999997311 00 1111111 11000000 0234556788899876311 10
Q ss_pred -CCChHHHHHHHHHHhhccCCC-CCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeecc
Q 011679 288 -VKYTPQWEWLREELKKVDREK-TPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRIS 365 (479)
Q Consensus 288 -~~~~~Q~~WL~~~L~~~~~~~-~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~ 365 (479)
.....|+.||++.|++..... ..++|+++|+|++..... .+.+..++++++++++|+||+|..++..|+.
T Consensus 141 ~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~ 212 (232)
T cd07393 141 EKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICVYGHLHGVGRDRAIN 212 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEEECCCCCCccccccc
Confidence 012569999999999753222 247999999998765421 2356788889999999999999999887763
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-15 Score=140.67 Aligned_cols=150 Identities=21% Similarity=0.233 Sum_probs=98.8
Q ss_pred CeEEEEEecCCCCCCc---------HH---HHHHHH-HhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-cC
Q 011679 159 SYKFGIIGDLGQTYNS---------LS---TLEHYM-ESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQ 224 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~---------~~---~l~~i~-~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 224 (479)
.+||++++|+|..... .. .+..+. +.+||+||++||+++...... ..+..+.+.++.+.. .+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~----~~~~~~~~~~~~l~~~~~ 77 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTND----NSTSALDKAVSPMIDRKI 77 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCch----HHHHHHHHHHHHHHHcCC
Confidence 6899999999986532 12 233333 338999999999998654311 124555666666644 68
Q ss_pred CeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhc
Q 011679 225 PWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKV 304 (479)
Q Consensus 225 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 304 (479)
|+++++||||.. .-....|++||+++|++.
T Consensus 78 p~~~~~GNHD~~--------------------------------------------------g~l~~~ql~wL~~~l~~~ 107 (199)
T cd07383 78 PWAATFGNHDGY--------------------------------------------------DWIRPSQIEWFKETSAAL 107 (199)
T ss_pred CEEEECccCCCC--------------------------------------------------CCCCHHHHHHHHHHHHHH
Confidence 999999999910 012368999999999985
Q ss_pred c--CCCCCeEEEEeccccccCCCCc---------cCc---CHHHHHHHHH-HHHHcCccEEEecccccceeee
Q 011679 305 D--REKTPWLIVLMHVPIYNSNEAH---------FME---GESMRAAFES-WFVRYKVDVVFAGHVHAYERSY 362 (479)
Q Consensus 305 ~--~~~~~w~Iv~~H~P~~~~~~~~---------~~~---~~~~~~~l~~-l~~~~~VdlvlsGH~H~y~r~~ 362 (479)
. +....+.++++|+|+....... ..+ .......+.. +.+..+|+++||||+|.++...
T Consensus 108 ~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 108 KKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred hhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 2 2234679999999986543210 001 1112233444 4466899999999999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-15 Score=137.72 Aligned_cols=167 Identities=13% Similarity=0.097 Sum_probs=101.8
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccccccCC
Q 011679 162 FGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYM 241 (479)
Q Consensus 162 f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~ 241 (479)
|+++||+|.+...... ..+.+.++|+||++||++..... .....+ +.++. ...|+++++||||.....
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~~------~~~~~~-~~l~~--~~~p~~~v~GNHD~~~~~-- 68 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGGK------EAAVEI-NLLLA--IGVPVLAVPGNCDTPEIL-- 68 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCCH------HHHHHH-HHHHh--cCCCEEEEcCCCCCHHHH--
Confidence 5789999987543333 33444589999999999964321 111111 22322 267999999999974210
Q ss_pred CccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCC------CCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 011679 242 GEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP------FVKYTPQWEWLREELKKVDREKTPWLIVL 315 (479)
Q Consensus 242 ~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 315 (479)
......... ..+ ..+.++++.|+++++... .....+|++|+ +.|.. ...+.+|++
T Consensus 69 ------~~~~~~~~~-------~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~ilv 129 (188)
T cd07392 69 ------GLLTSAGLN-------LHG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLILV 129 (188)
T ss_pred ------HhhhcCcEe-------cCC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEEE
Confidence 000000000 011 234578899999987421 12356899998 44544 334568999
Q ss_pred eccccccCCCCccCcC-HHHHHHHHHHHHHcCccEEEecccccce
Q 011679 316 MHVPIYNSNEAHFMEG-ESMRAAFESWFVRYKVDVVFAGHVHAYE 359 (479)
Q Consensus 316 ~H~P~~~~~~~~~~~~-~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 359 (479)
+|+|++.......... ....+.+.+++++++++++||||+|.-.
T Consensus 130 ~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 130 THAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred ECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 9999976311111111 1124678888999999999999999854
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.2e-15 Score=148.60 Aligned_cols=94 Identities=13% Similarity=0.241 Sum_probs=71.7
Q ss_pred CCcEEEEE-eCCEEEEEEcCCCCC-----CCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCcc-----CcCHH
Q 011679 265 SPLWYAIR-RASAHIIVLSSYSPF-----VKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHF-----MEGES 333 (479)
Q Consensus 265 ~~~yysf~-~g~~~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~-----~~~~~ 333 (479)
...||+|+ .++++||+|||.... ....+|++||+++|++ ...+++||++|||++....... .....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~---a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA---SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc---CCCCCEEEEECCCCcccccccccccccccccc
Confidence 45699999 899999999996431 2458999999999997 4456799999999986543110 01122
Q ss_pred HHHHHHHHHHHc-CccEEEecccccceee
Q 011679 334 MRAAFESWFVRY-KVDVVFAGHVHAYERS 361 (479)
Q Consensus 334 ~~~~l~~l~~~~-~VdlvlsGH~H~y~r~ 361 (479)
..++|.++|+++ +|.++||||+|.....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 356899999998 7999999999986543
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.2e-15 Score=138.86 Aligned_cols=176 Identities=16% Similarity=0.120 Sum_probs=103.4
Q ss_pred EEEEEecCCCCCCc---HH----HHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCc
Q 011679 161 KFGIIGDLGQTYNS---LS----TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (479)
Q Consensus 161 ~f~~~gD~~~~~~~---~~----~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 233 (479)
||+++||+|..... .. .++.+.+.++|+||++||++... .+...+.+.+..+ ...|++.++|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~--------~~~~~~~~~l~~~-~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDF--------QRSLPFIEKLQEL-KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccch--------hhHHHHHHHHHHh-cCCcEEEECCCC
Confidence 58999999975322 22 33445556999999999999531 1112233333322 458999999999
Q ss_pred ccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCC--------------------------C
Q 011679 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP--------------------------F 287 (479)
Q Consensus 234 D~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~--------------------------~ 287 (479)
|+..... +..+...+. + ....+.++.+..++++|++++...+ .
T Consensus 72 D~~~~~~------~~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (239)
T TIGR03729 72 DMLKDLT------YEEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKR 140 (239)
T ss_pred CCCCCCC------HHHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCC
Confidence 9741110 011111110 0 0011223333346778888773111 1
Q ss_pred C-----CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCC------CccCcC--HHHHHHHHHHHHHcCccEEEecc
Q 011679 288 V-----KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNE------AHFMEG--ESMRAAFESWFVRYKVDVVFAGH 354 (479)
Q Consensus 288 ~-----~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~------~~~~~~--~~~~~~l~~l~~~~~VdlvlsGH 354 (479)
. ...+|++||++.|++.. .+.+|+++|+|+..... ..+... ......+.+++++++|+++||||
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~~---~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH 217 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQLD---NKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGH 217 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhcC---CCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECC
Confidence 0 13678999999998752 23489999999854211 111110 11146788999999999999999
Q ss_pred cccce
Q 011679 355 VHAYE 359 (479)
Q Consensus 355 ~H~y~ 359 (479)
+|.-.
T Consensus 218 ~H~~~ 222 (239)
T TIGR03729 218 LHRRF 222 (239)
T ss_pred ccCCC
Confidence 99854
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-14 Score=134.05 Aligned_cols=198 Identities=16% Similarity=0.038 Sum_probs=112.2
Q ss_pred CeEEEEEecCCCCCCc-----HHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCc
Q 011679 159 SYKFGIIGDLGQTYNS-----LSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~-----~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 233 (479)
++||+++||+|..... .+.++.+.+.+||+|+++||+++..... . +.+.+.++.+....|+++++|||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~-----~--~~~~~~l~~l~~~~~v~~v~GNH 73 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDV-----L--ELLLELLKKLKAPLGVYAVLGNH 73 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchh-----h--HHHHHHHhccCCCCCEEEECCCc
Confidence 4799999999987542 2234444555899999999999753321 1 34556666666678999999999
Q ss_pred ccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEE
Q 011679 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLI 313 (479)
Q Consensus 234 D~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~I 313 (479)
|+...... .+........+. ...+.+..++.++..+...--.. .....+++.+.+++. .+...+|
T Consensus 74 D~~~~~~~----~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~~~~~~~--~~~~~~I 138 (223)
T cd07385 74 DYYSGDEE----NWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDD----GLGRRPDLEKALKGL--DEDDPNI 138 (223)
T ss_pred ccccCchH----HHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccC----ccccCCCHHHHHhCC--CCCCCEE
Confidence 98642110 000011111111 01233455556554443332111 112334566666654 3455789
Q ss_pred EEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCc---ccccCCcccccCCCCCCeEEEe
Q 011679 314 VLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLH---YNISSGDCFPVPDKSAPVYITV 390 (479)
Q Consensus 314 v~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~---~~~~~g~~~~~~~~~~~~~i~~ 390 (479)
++.|.|.+. ..+.+.++|++++||+|..|...|..... .....-....+..++..+||..
T Consensus 139 ~l~H~P~~~-----------------~~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~Vs~ 201 (223)
T cd07385 139 LLAHQPDTA-----------------EEAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDYGLYRKGGSQLYVSR 201 (223)
T ss_pred EEecCCChh-----------------HHhcccCccEEEeccCCCCEEeccccccccchhhcCcccceEEEECCEEEEEcC
Confidence 999997641 11256799999999999999776643221 0000000011223455777777
Q ss_pred CCCCC
Q 011679 391 GDGGN 395 (479)
Q Consensus 391 G~gG~ 395 (479)
|.|..
T Consensus 202 G~G~~ 206 (223)
T cd07385 202 GLGTW 206 (223)
T ss_pred CccCC
Confidence 76654
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.9e-14 Score=121.43 Aligned_cols=116 Identities=21% Similarity=0.238 Sum_probs=83.7
Q ss_pred EEEEecCCCCCCcHH-----------HHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhcc-CCeEEc
Q 011679 162 FGIIGDLGQTYNSLS-----------TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY-QPWIWS 229 (479)
Q Consensus 162 f~~~gD~~~~~~~~~-----------~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~~~v 229 (479)
|++++|+|.+..... .++.+.+.++|+|+++||+++... ...|+.+.++++.+... .|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGL------PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCC------HHHHHHHHHHHHHccccCCcEEEe
Confidence 578999998754211 123333449999999999997532 34556667777777553 699999
Q ss_pred CCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCC
Q 011679 230 AGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKT 309 (479)
Q Consensus 230 ~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~ 309 (479)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999995
Q ss_pred CeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceee
Q 011679 310 PWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERS 361 (479)
Q Consensus 310 ~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~ 361 (479)
|+++|+|++...... ......++.+.+++.+++++++||||+|.....
T Consensus 81 ---iv~~Hhp~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 ---IVVLHHPLVPPPGSG-RERLLDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred ---EEEecCCCCCCCccc-cccCCCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 889999997754421 111114567899999999999999999996544
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.5e-13 Score=134.53 Aligned_cols=179 Identities=18% Similarity=0.196 Sum_probs=111.6
Q ss_pred eEEEEEecCCCC--CC-cHHH----HHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCC
Q 011679 160 YKFGIIGDLGQT--YN-SLST----LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232 (479)
Q Consensus 160 ~~f~~~gD~~~~--~~-~~~~----l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GN 232 (479)
++|+.++|.|.. .. .... ++.+...+||+||++||++.. +. ...++...++++......|++++|||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~-----~~~~~~~~~~l~~~~~~~~~~~vpGN 74 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND-GE-----PEEYRRLKELLARLELPAPVIVVPGN 74 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CC-----HHHHHHHHHHHhhccCCCceEeeCCC
Confidence 589999999998 22 2222 344444589999999999975 22 23344455566644456789999999
Q ss_pred cccccccCCCccccccccccccccCcCCCCCCCCcEEEEEe-CCEEEEEEcCCCCC----CCChHHHHHHHHHHhhccCC
Q 011679 233 HEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRR-ASAHIIVLSSYSPF----VKYTPQWEWLREELKKVDRE 307 (479)
Q Consensus 233 HD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~-g~~~fi~Ldt~~~~----~~~~~Q~~WL~~~L~~~~~~ 307 (479)
||...... ..+...+... ...+..... ++++++.+|+.... ..+..|++||++.|+.....
T Consensus 75 HD~~~~~~-------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~ 140 (301)
T COG1409 75 HDARVVNG-------EAFSDQFFNR-------YAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPER 140 (301)
T ss_pred CcCCchHH-------HHhhhhhccc-------CcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccc
Confidence 99853210 1111111100 001111112 67899999996542 24689999999999985322
Q ss_pred CCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcC--ccEEEecccccc
Q 011679 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYK--VDVVFAGHVHAY 358 (479)
Q Consensus 308 ~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--VdlvlsGH~H~y 358 (479)
....+|+++|||+.................+..++..++ |+++|+||.|..
T Consensus 141 ~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 141 AKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred cCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 112467777777765443322222223346667777888 999999999985
|
|
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.4e-13 Score=123.55 Aligned_cols=177 Identities=14% Similarity=0.167 Sum_probs=104.2
Q ss_pred CCeEEEEEecCCCCCCcHHHHHH-HHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-cCCeEEcCCCccc
Q 011679 158 ASYKFGIIGDLGQTYNSLSTLEH-YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQPWIWSAGNHEI 235 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~~~~l~~-i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~v~GNHD~ 235 (479)
...|++++||+|.+....+.+.. +.+.++|+||++||++.... ..+.+.++++.+.. ..|+++++||||.
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~--------~~~~~~~~l~~l~~l~~pv~~V~GNhD~ 74 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAA--------KSEDYAAFFRILGEAHLPTFYVPGPQDA 74 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCC--------CHHHHHHHHHHHHhcCCceEEEcCCCCh
Confidence 46789999999976544333333 33348999999999997431 11344455555533 4799999999996
Q ss_pred ccccCCCccccccccccccccCcCCCCCCCCcEEEEEe-CCEEEEEEcCCCCC--CCChHHH----HHHHH-HHhhccCC
Q 011679 236 EYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRR-ASAHIIVLSSYSPF--VKYTPQW----EWLRE-ELKKVDRE 307 (479)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~-g~~~fi~Ldt~~~~--~~~~~Q~----~WL~~-~L~~~~~~ 307 (479)
....... ..|......|.. .. ....+ ..+ |++.|+.|+....+ ....+|. .||.+ .|+.....
T Consensus 75 ~v~~~l~-----~~~~~~~~~p~~-~~-lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~ 145 (224)
T cd07388 75 PLWEYLR-----EAYNAELVHPEI-RN-VHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL 145 (224)
T ss_pred HHHHHHH-----HHhcccccCccc-ee-cCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhC
Confidence 3100000 011111111210 00 11122 334 66999999975433 2344542 56433 22222112
Q ss_pred CCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccc
Q 011679 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVH 356 (479)
Q Consensus 308 ~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H 356 (479)
..+..|+++|+|++..+..+ .-...+..++++++..++||||+|
T Consensus 146 ~~~~~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 146 KDYRKVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred CCCCeEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 34468999999999874222 123567889999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-13 Score=128.11 Aligned_cols=163 Identities=18% Similarity=0.205 Sum_probs=110.6
Q ss_pred EEEEEecCCCCCCcHHHHHHHH----HhCCCEEEEcCcccccCccc--------------------ccccchhhhHH--H
Q 011679 161 KFGIIGDLGQTYNSLSTLEHYM----ESGAQTVLFLGDLSYADRYQ--------------------FIDVGVRWDSW--G 214 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~~l~~i~----~~~pd~vl~~GD~~y~~~~~--------------------~~~~~~~~~~~--~ 214 (479)
||++.||.+...........+. +.+||++|++||++|++... ..+++.+|..+ .
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5899999988877766777665 56999999999999998631 11122233333 1
Q ss_pred HHHHhhhccCCeEEcCCCcccccccCCCcc-------------ccccccccccccCcCCCC--CCCCcEEEEEeCCE-EE
Q 011679 215 RFVERSAAYQPWIWSAGNHEIEYMTYMGEV-------------VPFKSYLHRYPTPHLASK--SSSPLWYAIRRASA-HI 278 (479)
Q Consensus 215 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~-------------~~~~~~~~~~~~p~~~~~--~~~~~yysf~~g~~-~f 278 (479)
..++.+.+++|++.+|+|||+..+...... ....+|......+..... .....|+++.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 446777888999999999999865443110 111234444433322221 34568999999996 99
Q ss_pred EEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCcc--EEEecccc
Q 011679 279 IVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD--VVFAGHVH 356 (479)
Q Consensus 279 i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~Vd--lvlsGH~H 356 (479)
++||+.... ..|......|+++..++.+.++. ++|||++|
T Consensus 161 ~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999997653 24455667788888886665433 88999999
Q ss_pred cceee
Q 011679 357 AYERS 361 (479)
Q Consensus 357 ~y~r~ 361 (479)
..+-.
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 86554
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.47 E-value=3e-13 Score=120.73 Aligned_cols=144 Identities=15% Similarity=0.243 Sum_probs=86.1
Q ss_pred EEEEecCCCCCCcHHHH--HHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccccccc
Q 011679 162 FGIIGDLGQTYNSLSTL--EHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMT 239 (479)
Q Consensus 162 f~~~gD~~~~~~~~~~l--~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~ 239 (479)
|+++||+|.+....... +.+.+.++|+++++||+++.... ..+...........|+++++||||+...
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~---------~~~~~~~~~~~~~~~v~~v~GNHD~~~~- 70 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDA---------PRFAPLLLALKGFEPVIYVPGNHEFYVR- 70 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcch---------HHHHHHHHhhcCCccEEEeCCCcceEEE-
Confidence 57899999876543322 22334489999999999964321 1122223333456899999999998410
Q ss_pred CCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccc
Q 011679 240 YMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVP 319 (479)
Q Consensus 240 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P 319 (479)
+ .. ...|+.+.. ...++.+|+.++++ +.+||++|||
T Consensus 71 ----------~---~G---------~~~w~~~~~---------------~~~~~~~~~~~d~~-------~~~vv~~Hhp 106 (166)
T cd07404 71 ----------I---IG---------TTLWSDISL---------------FGEAAARMRMNDFR-------GKTVVVTHHA 106 (166)
T ss_pred ----------E---Ee---------eecccccCc---------------cchHHHHhCCCCCC-------CCEEEEeCCC
Confidence 0 00 011222211 11234444444433 3489999999
Q ss_pred cccCCCCc-c---CcCHHHHHHHHHHHHHcCccEEEecccccce
Q 011679 320 IYNSNEAH-F---MEGESMRAAFESWFVRYKVDVVFAGHVHAYE 359 (479)
Q Consensus 320 ~~~~~~~~-~---~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 359 (479)
+....... . ......++.+..++++++|++++|||+|...
T Consensus 107 P~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 107 PSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred CCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccc
Confidence 98754321 1 1112345567788888999999999999864
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.9e-13 Score=125.94 Aligned_cols=186 Identities=16% Similarity=0.100 Sum_probs=103.0
Q ss_pred EEEEEecCCCCCCc------------HHHHH----HHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh-cc
Q 011679 161 KFGIIGDLGQTYNS------------LSTLE----HYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-AY 223 (479)
Q Consensus 161 ~f~~~gD~~~~~~~------------~~~l~----~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~ 223 (479)
||++++|+|.+... ..+++ .+.+.++|+||++||++...... ...+..+.+.++.+. ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPS----PEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCC----HHHHHHHHHHHHHHHHCC
Confidence 68999999987431 12233 33345999999999998654311 223455556666664 47
Q ss_pred CCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhh
Q 011679 224 QPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303 (479)
Q Consensus 224 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 303 (479)
+|+++++||||....... ......+.. +..-.............++.+++.|+.++..... ....+.++++..+..
T Consensus 77 ~~v~~~~GNHD~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~ 152 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGA--LSPLLALSG-LHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRP 152 (223)
T ss_pred CCEEEecCCCCCcccccc--ccchHhhCc-EEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhc
Confidence 899999999998642111 000000000 0000000000111222334456788888754321 123344444455444
Q ss_pred ccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEeccccccee
Q 011679 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYER 360 (479)
Q Consensus 304 ~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 360 (479)
. .....+|+++|.|+.......... .......+...++|++++||.|..+.
T Consensus 153 ~--~~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 153 L--DPDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred c--CCCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCee
Confidence 3 345679999999986544321110 12234455678899999999999754
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.1e-12 Score=124.42 Aligned_cols=193 Identities=16% Similarity=0.119 Sum_probs=107.6
Q ss_pred CCeEEEEEecCCCCCC-cH----HHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCC
Q 011679 158 ASYKFGIIGDLGQTYN-SL----STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~-~~----~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GN 232 (479)
.++||+++||+|.... .. +.++.+.+.+||+|+++||+++.+. ...++.+.+.++.+.+..|+++++||
T Consensus 48 ~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~------~~~~~~~~~~L~~L~~~~pv~~V~GN 121 (271)
T PRK11340 48 APFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDM------PLNFSAFSDVLSPLAECAPTFACFGN 121 (271)
T ss_pred CCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCc------cccHHHHHHHHHHHhhcCCEEEecCC
Confidence 4699999999998632 12 2233444559999999999986221 12234566777777767899999999
Q ss_pred cccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCC--EEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCC
Q 011679 233 HEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRAS--AHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTP 310 (479)
Q Consensus 233 HD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~--~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 310 (479)
||+...... ...+....+... .....+....+..++ +.++++|.... + ... ..+.++ + ..
T Consensus 122 HD~~~~~~~--~~~~~~~l~~~g-----i~lL~n~~~~i~~~~~~i~i~G~~d~~~-~--~~~---~~~~~~----~-~~ 183 (271)
T PRK11340 122 HDRPVGTEK--NHLIGETLKSAG-----ITVLFNQATVIATPNRQFELVGTGDLWA-G--QCK---PPPASE----A-NL 183 (271)
T ss_pred CCcccCccc--hHHHHHHHHhcC-----cEEeeCCeEEEeeCCcEEEEEEecchhc-c--CCC---hhHhcC----C-CC
Confidence 998532110 000111111111 011123444555543 66777764211 1 101 112222 2 23
Q ss_pred eEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcc------cccCCcccccCCCCC
Q 011679 311 WLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHY------NISSGDCFPVPDKSA 384 (479)
Q Consensus 311 w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~------~~~~g~~~~~~~~~~ 384 (479)
.+|++.|.|-.- +.+.+.++|++||||+|.=|-..|..+..+ ....| .+...+.
T Consensus 184 ~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~~~~~~~~~~~~~~~~G---~~~~~~~ 243 (271)
T PRK11340 184 PRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAG---LNAFGER 243 (271)
T ss_pred CeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccccCccccccccCcccCC---cEEeCCc
Confidence 589999999641 223467899999999999776656422111 01112 1223455
Q ss_pred CeEEEeCCCC
Q 011679 385 PVYITVGDGG 394 (479)
Q Consensus 385 ~~~i~~G~gG 394 (479)
.+||..|-|.
T Consensus 244 ~l~Vs~G~G~ 253 (271)
T PRK11340 244 QIYTTRGVGS 253 (271)
T ss_pred EEEEeCCccC
Confidence 6777777664
|
|
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-13 Score=100.40 Aligned_cols=62 Identities=45% Similarity=0.822 Sum_probs=40.9
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCCCceeeeeeE
Q 011679 383 SAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSF 449 (479)
Q Consensus 383 ~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g~~~~~D~f 449 (479)
++|+||++|+||+.+ ..+..++|+|++++...|||++|+|.|.|+|.|+|+++.+|++ .|+|
T Consensus 1 kapVhiv~G~aG~~l---~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v--~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGL---DPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSV--LDEF 62 (62)
T ss_dssp TS-EEEEE--S-T-------B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T---CEE-
T ss_pred CCCEEEEECcCCCCc---ccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcE--ecCC
Confidence 479999999999943 3466778999999999999999999999999999999988986 7987
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.40 E-value=6e-12 Score=124.83 Aligned_cols=91 Identities=21% Similarity=0.391 Sum_probs=64.2
Q ss_pred CcEEEEE-eCCE--EEEEEcCCCCC-----------CCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCc---c
Q 011679 266 PLWYAIR-RASA--HIIVLSSYSPF-----------VKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAH---F 328 (479)
Q Consensus 266 ~~yysf~-~g~~--~fi~Ldt~~~~-----------~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~---~ 328 (479)
..||+|+ .|++ ++|+||+.... ....+|++||+++|++.. .+.+++|+++|+|+.+..... +
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCcccCCccchhhh
Confidence 4599999 5855 99999986411 135899999999999863 245778888888887522210 1
Q ss_pred C----------cCHHHHHHHHHHHHHc-CccEEEeccccc
Q 011679 329 M----------EGESMRAAFESWFVRY-KVDVVFAGHVHA 357 (479)
Q Consensus 329 ~----------~~~~~~~~l~~l~~~~-~VdlvlsGH~H~ 357 (479)
. .....-.+|..+|.+| +|.++||||.|.
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHr 410 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHL 410 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccc
Confidence 1 0011124789999998 688999999997
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.2e-11 Score=112.05 Aligned_cols=194 Identities=22% Similarity=0.294 Sum_probs=105.9
Q ss_pred CCCeEEEEEecCCCCCC-----------------c---HHHHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHH
Q 011679 157 DASYKFGIIGDLGQTYN-----------------S---LSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGR 215 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~-----------------~---~~~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~ 215 (479)
.++||++.++|+|.+.. . ...+.++.+. +||||+++||+++.... +..-..+.+
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t-----~Da~~sl~k 125 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHST-----QDAATSLMK 125 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccccc-----HhHHHHHHH
Confidence 47899999999998643 1 1224444444 99999999999986432 111234556
Q ss_pred HHHhhh-ccCCeEEcCCCcccccccCCCccccccccccccccCcCCC---CCCCCcEEEEEeCC----------------
Q 011679 216 FVERSA-AYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS---KSSSPLWYAIRRAS---------------- 275 (479)
Q Consensus 216 ~~~~~~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~yysf~~g~---------------- 275 (479)
.+++.. .++||.+++||||-...-...+. ..+.. .+|..-+ ......+.-..+|+
T Consensus 126 AvaP~I~~~IPwA~~lGNHDdes~ltr~ql---~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~ 200 (379)
T KOG1432|consen 126 AVAPAIDRKIPWAAVLGNHDDESDLTRLQL---MKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENK 200 (379)
T ss_pred HhhhHhhcCCCeEEEecccccccccCHHHH---HHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCcccccC
Confidence 677664 48999999999998643111000 01110 1222110 00011111111111
Q ss_pred --EEEEEEcCCCC---------CC-CChHHHHHHHHHHhhc---cCCCCC-eEEEEeccccccCCCCc--------cCcC
Q 011679 276 --AHIIVLSSYSP---------FV-KYTPQWEWLREELKKV---DREKTP-WLIVLMHVPIYNSNEAH--------FMEG 331 (479)
Q Consensus 276 --~~fi~Ldt~~~---------~~-~~~~Q~~WL~~~L~~~---~~~~~~-w~Iv~~H~P~~~~~~~~--------~~~~ 331 (479)
..+++||+..+ |+ ....|.+||+..-.+. +..-.| --+++.|.|+-.-..-. ..++
T Consensus 201 sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~ 280 (379)
T KOG1432|consen 201 SVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEG 280 (379)
T ss_pred ceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeecc
Confidence 34667776432 11 2467999999877331 111122 35788999974211100 0111
Q ss_pred ---HHHHHHHHHHHH-HcCccEEEeccccccee
Q 011679 332 ---ESMRAAFESWFV-RYKVDVVFAGHVHAYER 360 (479)
Q Consensus 332 ---~~~~~~l~~l~~-~~~VdlvlsGH~H~y~r 360 (479)
......+...|. +.+|+.|+|||+|+..-
T Consensus 281 ~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDf 313 (379)
T KOG1432|consen 281 VSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDF 313 (379)
T ss_pred ccccccccHHHHHHHhccCcceEEeccccccce
Confidence 111234555565 78999999999998533
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.6e-11 Score=103.89 Aligned_cols=116 Identities=25% Similarity=0.298 Sum_probs=82.5
Q ss_pred EEEecCCCCCCcHHHHH---HHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccccccc
Q 011679 163 GIIGDLGQTYNSLSTLE---HYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMT 239 (479)
Q Consensus 163 ~~~gD~~~~~~~~~~l~---~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~ 239 (479)
+++||+|.......... ...+.++|+||++||+++.... ..+..+...........|++.++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPD------PEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCC------chHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 36899998866544432 3334499999999999986442 222222223333455789999999999
Q ss_pred CCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccc
Q 011679 240 YMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVP 319 (479)
Q Consensus 240 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P 319 (479)
|+++|.|
T Consensus 70 -------------------------------------------------------------------------i~~~H~~ 76 (131)
T cd00838 70 -------------------------------------------------------------------------ILLTHGP 76 (131)
T ss_pred -------------------------------------------------------------------------EEEeccC
Confidence 8899999
Q ss_pred cccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeee
Q 011679 320 IYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSY 362 (479)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~ 362 (479)
++.............+..+..++.+.+++++|+||.|.+++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 77 PYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred CCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 8766543222222246788889999999999999999998875
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.2e-11 Score=103.93 Aligned_cols=154 Identities=23% Similarity=0.285 Sum_probs=88.3
Q ss_pred eEEEEEecCCCCCCcH-HHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccccc
Q 011679 160 YKFGIIGDLGQTYNSL-STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYM 238 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~-~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~ 238 (479)
|||+++||+|...... +.++.+ .++|+|+++||++.. ..+.+.++.+ |++++.||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------~~~~~~~~~~----~~~~v~GNHD~~~- 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------EEVLELLRDI----PVYVVRGNHDNWA- 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------HHHHHHHHHH----EEEEE--CCHSTH-
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------HHHHHHHhcC----CEEEEeCCccccc-
Confidence 7999999999965432 233434 479999999999841 3334444443 8999999999632
Q ss_pred cCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecc
Q 011679 239 TYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHV 318 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~ 318 (479)
+...... .. +.+.+.. .-..+.|+++|.
T Consensus 62 -----------~~~~~~~---------~~-----------------------------~~~~~~~---~~~~~~i~~~H~ 89 (156)
T PF12850_consen 62 -----------FPNENDE---------EY-----------------------------LLDALRL---TIDGFKILLSHG 89 (156)
T ss_dssp -----------HHSEECT---------CS-----------------------------SHSEEEE---EETTEEEEEESS
T ss_pred -----------chhhhhc---------cc-----------------------------cccceee---eecCCeEEEECC
Confidence 1100000 00 1111110 112457888888
Q ss_pred ccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCC
Q 011679 319 PIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEG 398 (479)
Q Consensus 319 P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~ 398 (479)
+.+.... ..+.+..++...+++++|+||.|..+.... +++.++..|+-+....
T Consensus 90 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~-------------------~~~~~~~~Gs~~~~~~ 142 (156)
T PF12850_consen 90 HPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFKI-------------------GGIHVINPGSIGGPRH 142 (156)
T ss_dssp TSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEEE-------------------TTEEEEEE-GSSS-SS
T ss_pred CCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEEE-------------------CCEEEEECCcCCCCCC
Confidence 7765331 123455777799999999999999766541 4467787777554321
Q ss_pred CCCCCCCCCCCccceeeccccEEEEEEec
Q 011679 399 LAGKFRYPQPDYSAFREASYGHSTLEIKN 427 (479)
Q Consensus 399 ~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~ 427 (479)
. . .-+|+.+++.+
T Consensus 143 -----~----------~-~~~~~i~~~~~ 155 (156)
T PF12850_consen 143 -----G----------D-QSGYAILDIED 155 (156)
T ss_dssp -----S----------S-SEEEEEEEETT
T ss_pred -----C----------C-CCEEEEEEEec
Confidence 0 1 35788888754
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-10 Score=100.43 Aligned_cols=117 Identities=16% Similarity=0.145 Sum_probs=74.1
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccccccC
Q 011679 161 KFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTY 240 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~ 240 (479)
||+++||+|.... .+...++|+++++||++.... ...++.+.+.++.+. ..++++++||||...
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~------~~~~~~~~~~l~~~~-~~~~~~v~GNHD~~~--- 64 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGT------LEELQKFLDWLKSLP-HPHKIVIAGNHDLTL--- 64 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHhCC-CCeEEEEECCCCCcC---
Confidence 5899999998754 222348999999999985422 122233444444432 123578999999631
Q ss_pred CCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccc
Q 011679 241 MGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPI 320 (479)
Q Consensus 241 ~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~ 320 (479)
. . ..+.|+++|.|+
T Consensus 65 ------------------------~--------------------------------------~----~~~~ilv~H~~p 78 (135)
T cd07379 65 ------------------------D--------------------------------------P----EDTDILVTHGPP 78 (135)
T ss_pred ------------------------C--------------------------------------C----CCCEEEEECCCC
Confidence 0 1 124688999999
Q ss_pred ccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccce
Q 011679 321 YNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYE 359 (479)
Q Consensus 321 ~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 359 (479)
+............-.+.+.+++++++++++|+||+|...
T Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 79 YGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred CcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 765432211011112456677788999999999999864
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.7e-10 Score=107.82 Aligned_cols=85 Identities=18% Similarity=0.082 Sum_probs=62.2
Q ss_pred EEECCCCCCCCCCeEEEEEecCCCCCCcH---HHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhcc
Q 011679 147 WFQTPPKIDPDASYKFGIIGDLGQTYNSL---STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY 223 (479)
Q Consensus 147 ~f~T~p~~~~~~~~~f~~~gD~~~~~~~~---~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (479)
...++..+....+++++.++|.|...... +.+..+....||+|+++||++.... ...++.+.+.++.+.+.
T Consensus 32 ~i~~~~~~~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~------~~~~~~~~~~L~~L~~~ 105 (284)
T COG1408 32 TILTPKLPASLQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDR------PPGVAALALFLAKLKAP 105 (284)
T ss_pred EeecCCCCcccCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCC------CCCHHHHHHHHHhhhcc
Confidence 33344444445789999999999876552 2334444558899999999997411 23346677889999899
Q ss_pred CCeEEcCCCccccc
Q 011679 224 QPWIWSAGNHEIEY 237 (479)
Q Consensus 224 ~P~~~v~GNHD~~~ 237 (479)
.++++++||||+..
T Consensus 106 ~gv~av~GNHd~~~ 119 (284)
T COG1408 106 LGVFAVLGNHDYGV 119 (284)
T ss_pred CCEEEEeccccccc
Confidence 99999999999863
|
|
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.2e-09 Score=99.76 Aligned_cols=64 Identities=22% Similarity=0.329 Sum_probs=43.8
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccccc
Q 011679 160 YKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEY 237 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~ 237 (479)
+||+++||+|..... ...+.+.+.+||+|+++||++... ....+.+..+ ..|+++++||||...
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~~-----------~~~~~~l~~l--~~p~~~V~GNHD~~~ 64 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNES-----------VQLVRAISSL--PLPKAVILGNHDAWY 64 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcCh-----------HHHHHHHHhC--CCCeEEEcCCCcccc
Confidence 589999999976432 223445555999999999998321 1122223322 469999999999864
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.8e-10 Score=99.48 Aligned_cols=107 Identities=21% Similarity=0.278 Sum_probs=67.1
Q ss_pred CCCEEEEcCcccccCcccccccchhhhHHHHHHHhh---hccCCeEEcCCCcccccccCCCccccccccccccccCcCCC
Q 011679 185 GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS---AAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS 261 (479)
Q Consensus 185 ~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~---~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~ 261 (479)
+||+|+++||++.+..... ..+|..+.+-+..+ ...+|++.++||||+....... ...-..+|.
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~---~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~~~----~~~~v~RF~------ 108 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIAN---DDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEEDP----IESKIRRFE------ 108 (195)
T ss_pred CCCEEEEeccccCCCCCCC---HHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCCCc----CHHHHHHHH------
Confidence 9999999999998755322 22333322222222 2358999999999996321000 001111111
Q ss_pred CCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHH
Q 011679 262 KSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESW 341 (479)
Q Consensus 262 ~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l 341 (479)
+. | |+++|.|+..... ..+..+
T Consensus 109 -------------------------------------~~----------F-i~lsH~P~~~~~~----------~~~~~~ 130 (195)
T cd08166 109 -------------------------------------KY----------F-IMLSHVPLLAEGG----------QALKHV 130 (195)
T ss_pred -------------------------------------Hh----------h-eeeeccccccccc----------HHHHHH
Confidence 00 1 9999999976432 145677
Q ss_pred HHHcCccEEEecccccceeee
Q 011679 342 FVRYKVDVVFAGHVHAYERSY 362 (479)
Q Consensus 342 ~~~~~VdlvlsGH~H~y~r~~ 362 (479)
+.+++++++|+||.|.+....
T Consensus 131 ~~~~~p~~Ifs~H~H~s~~~~ 151 (195)
T cd08166 131 VTDLDPDLIFSAHRHKSSIFM 151 (195)
T ss_pred HHhcCceEEEEcCccceeeEE
Confidence 888999999999999976653
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.4e-09 Score=103.04 Aligned_cols=76 Identities=17% Similarity=0.039 Sum_probs=47.8
Q ss_pred eEEEEEecCCCCCCcHH----HHHHHH--HhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhcc-CCeEEcCCC
Q 011679 160 YKFGIIGDLGQTYNSLS----TLEHYM--ESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY-QPWIWSAGN 232 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~----~l~~i~--~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~~~v~GN 232 (479)
|+++++||+|.+..... .++.+. +.+||+|+++||++......... ........+.++.+... +|++.++||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~-~~~~~~~~~~l~~l~~~g~~v~~v~GN 79 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDP-SPFAREIAAALKALSDSGVPCYFMHGN 79 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcC-CHHHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 58999999998754322 223232 23899999999999531100000 11123444556666544 899999999
Q ss_pred cccc
Q 011679 233 HEIE 236 (479)
Q Consensus 233 HD~~ 236 (479)
||..
T Consensus 80 HD~~ 83 (241)
T PRK05340 80 RDFL 83 (241)
T ss_pred Cchh
Confidence 9974
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.9e-08 Score=90.79 Aligned_cols=176 Identities=18% Similarity=0.174 Sum_probs=104.7
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHH--HHhhh-ccCCeEEcCCCcc
Q 011679 159 SYKFGIIGDLGQTYNSLSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRF--VERSA-AYQPWIWSAGNHE 234 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~~~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~--~~~~~-~~~P~~~v~GNHD 234 (479)
.+|+++++|.|........+..+.+. ++|+++.+||++|..-.+. ..-.+. ++.+. ..+|+++++||-|
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~-------~~~~~~~~~e~l~~~~~~v~avpGNcD 75 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPK-------EVAEELNKLEALKELGIPVLAVPGNCD 75 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCch-------HHHHhhhHHHHHHhcCCeEEEEcCCCC
Confidence 68999999999987766666555554 9999999999994322111 111111 44444 4789999999977
Q ss_pred cccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCC--CC----CCChHH-HHHHHHHHhhccCC
Q 011679 235 IEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYS--PF----VKYTPQ-WEWLREELKKVDRE 307 (479)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~--~~----~~~~~Q-~~WL~~~L~~~~~~ 307 (479)
-..-. ......... .. + ...+.+++.|+.+--.. ++ ....++ +.-|++-+...+
T Consensus 76 ~~~v~---------~~l~~~~~~-----v~-~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~-- 136 (226)
T COG2129 76 PPEVI---------DVLKNAGVN-----VH-G--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD-- 136 (226)
T ss_pred hHHHH---------HHHHhcccc-----cc-c--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc--
Confidence 53110 000001100 01 1 46677888888744321 11 122332 233333344321
Q ss_pred CCCeEEEEeccccccCCCCccCc-CHHHHHHHHHHHHHcCccEEEecccccceee
Q 011679 308 KTPWLIVLMHVPIYNSNEAHFME-GESMRAAFESWFVRYKVDVVFAGHVHAYERS 361 (479)
Q Consensus 308 ~~~w~Iv~~H~P~~~~~~~~~~~-~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~ 361 (479)
..-+|+++|.|++........+ ...-...+..++++.++-+.+|||+|-+.-.
T Consensus 137 -~~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~ 190 (226)
T COG2129 137 -NPVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGI 190 (226)
T ss_pred -CcceEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeecccccc
Confidence 1113999999999876542111 1223567888999999999999999984333
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.4e-09 Score=92.61 Aligned_cols=57 Identities=26% Similarity=0.377 Sum_probs=39.3
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 161 KFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
|++++||+|... ..++.+.+. ++|.|+++||++..... .. +....|++.+.||||..
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~~~~~d~ii~~GD~~~~~~~---------~~-------~~~~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALELFGDVDLIIHAGDVLYPGPL---------NE-------LELKAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHHhcCCCEEEECCcccccccc---------ch-------hhcCCcEEEEeCCCCCc
Confidence 589999999765 333333332 39999999999864321 01 23457899999999974
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.5e-09 Score=89.46 Aligned_cols=49 Identities=20% Similarity=0.238 Sum_probs=32.4
Q ss_pred EEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceee
Q 011679 312 LIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERS 361 (479)
Q Consensus 312 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~ 361 (479)
+|+++|+|++....... ......+.+.+++.+++++++|+||+|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGED-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCccc-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 58888888764332110 00112456778888899999999999976544
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.5e-08 Score=91.14 Aligned_cols=180 Identities=19% Similarity=0.261 Sum_probs=85.6
Q ss_pred CeEEEEEecCCCCCCcHHHHHH-HHHhCCCEEEEcCcccccCcccccccchhhh-----------------------HHH
Q 011679 159 SYKFGIIGDLGQTYNSLSTLEH-YMESGAQTVLFLGDLSYADRYQFIDVGVRWD-----------------------SWG 214 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~~~l~~-i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~-----------------------~~~ 214 (479)
.-+++.++|.+........+.. +.+.+||.|+++||+.-.... ...|. .+.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~-----~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEAR-----SDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHH-----HHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchh-----hhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 3478999999876554444433 444499999999999854221 11222 222
Q ss_pred HHHHhhh-ccCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCC---C--C
Q 011679 215 RFVERSA-AYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP---F--V 288 (479)
Q Consensus 215 ~~~~~~~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~---~--~ 288 (479)
+++..+. ..+|++++|||||-....... .+|....-.|.-. . -..-+.+.-|...++.+-.+-. . .
T Consensus 80 ~ff~~L~~~~~p~~~vPG~~Dap~~~~lr-----~a~~~e~v~p~~~-~--vH~sf~~~~g~y~v~G~GGeI~~~~~~~~ 151 (255)
T PF14582_consen 80 KFFRILGELGVPVFVVPGNMDAPERFFLR-----EAYNAEIVTPHIH-N--VHESFFFWKGEYLVAGMGGEITDDQREEE 151 (255)
T ss_dssp HHHHHHHCC-SEEEEE--TTS-SHHHHHH-----HHHHCCCC-TTEE-E---CTCEEEETTTEEEEEE-SEEESSS-BCS
T ss_pred HHHHHHHhcCCcEEEecCCCCchHHHHHH-----HHhccceecccee-e--eeeeecccCCcEEEEecCccccCCCcccc
Confidence 4444443 378999999999974210000 1111111111100 0 0011223334566776654211 0 0
Q ss_pred ----CChHHHHHHHHHHhhccCCCCCeEEEEecccc-ccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccce
Q 011679 289 ----KYTPQWEWLREELKKVDREKTPWLIVLMHVPI-YNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYE 359 (479)
Q Consensus 289 ----~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~-~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 359 (479)
......+|..+.|.+++ +. -+|+++|.|+ +..+..+. -.+.+..++++++.++|||||.|--.
T Consensus 152 ~~LrYP~weaey~lk~l~elk--~~-r~IlLfhtpPd~~kg~~h~-----GS~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 152 FKLRYPAWEAEYSLKFLRELK--DY-RKILLFHTPPDLHKGLIHV-----GSAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp SS-EEEHHHHHHHHGGGGGCT--SS-EEEEEESS-BTBCTCTBTT-----SBHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ccccchHHHHHHHHHHHHhcc--cc-cEEEEEecCCccCCCcccc-----cHHHHHHHHHhcCCcEEEecccccch
Confidence 01224556666666642 23 4788899999 44332221 13467889999999999999999743
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.4e-09 Score=94.00 Aligned_cols=50 Identities=32% Similarity=0.578 Sum_probs=32.6
Q ss_pred CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh-------ccCCeEEcCCCccccc
Q 011679 185 GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-------AYQPWIWSAGNHEIEY 237 (479)
Q Consensus 185 ~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-------~~~P~~~v~GNHD~~~ 237 (479)
+||+||++||++...... . ...|....+.+..+. ..+|++.++||||+..
T Consensus 45 ~pd~vi~lGDl~d~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIA--D-SEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CCCEEEEeccccCCcEeC--C-HHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 999999999999653221 1 223443333333322 2689999999999853
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.5e-08 Score=89.19 Aligned_cols=50 Identities=22% Similarity=0.407 Sum_probs=32.4
Q ss_pred hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhh-h--ccCCeEEcCCCcccc
Q 011679 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS-A--AYQPWIWSAGNHEIE 236 (479)
Q Consensus 184 ~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-~--~~~P~~~v~GNHD~~ 236 (479)
.+||+|+++||++...... . ...|..+...+..+ . ...|++.++||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWS--T-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccC--C-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 3999999999999653221 1 23344433333333 2 247999999999984
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=4e-07 Score=81.92 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=39.3
Q ss_pred EEEEEecCCCCCCc---HHHHHHHHH-hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccc
Q 011679 161 KFGIIGDLGQTYNS---LSTLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 161 ~f~~~gD~~~~~~~---~~~l~~i~~-~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
+++++||+|..... ...+.++.+ .++|.|+|+||++.. ...+.++.+ ..|++.|.||||.
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~~-------------~~~~~l~~~--~~~~~~V~GN~D~ 64 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCSK-------------ETYDYLKTI--APDVHIVRGDFDE 64 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCCH-------------HHHHHHHhh--CCceEEEECCCCc
Confidence 47899999954432 223444444 379999999999841 112233333 2479999999996
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.4e-08 Score=100.65 Aligned_cols=178 Identities=19% Similarity=0.251 Sum_probs=101.5
Q ss_pred HHHHHHHHh--CCCEEEEcCcccccCcccccccchhh---hHHHHHHHhhhccCCeEEcCCCcccccccCCC--c--cc-
Q 011679 176 STLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRW---DSWGRFVERSAAYQPWIWSAGNHEIEYMTYMG--E--VV- 245 (479)
Q Consensus 176 ~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~--~--~~- 245 (479)
.++++|.+. ++|||+++||++-.+.+.... +... ..+.+.+......+|+|++.||||........ . ..
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~-~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~ 277 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTE-EENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRH 277 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhH-HHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchh
Confidence 346677776 599999999999765443211 1111 12233455556689999999999985321110 0 00
Q ss_pred ----cccccccccc--cCcCC-CCCCCCcEEEE-EeCCEEEEEEcCCCCC----------CCChHHHHHHHHHHhhccCC
Q 011679 246 ----PFKSYLHRYP--TPHLA-SKSSSPLWYAI-RRASAHIIVLSSYSPF----------VKYTPQWEWLREELKKVDRE 307 (479)
Q Consensus 246 ----~~~~~~~~~~--~p~~~-~~~~~~~yysf-~~g~~~fi~Ldt~~~~----------~~~~~Q~~WL~~~L~~~~~~ 307 (479)
-|..+...|. +|... .....+.||.. -.++.++|+||+..-+ ....+|++|+..+|.++...
T Consensus 278 ~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~ 357 (577)
T KOG3770|consen 278 SQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESA 357 (577)
T ss_pred hhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhc
Confidence 0011111111 23221 11223445554 4489999999995321 23467899999999987533
Q ss_pred CCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcC--ccEEEeccccccee
Q 011679 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYK--VDVVFAGHVHAYER 360 (479)
Q Consensus 308 ~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--VdlvlsGH~H~y~r 360 (479)
+. -+=++.|.|+-...- . +.....+..++.++. +...|.||.|.-+-
T Consensus 358 Ge-kVhil~HIPpG~~~c---~--~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f 406 (577)
T KOG3770|consen 358 GE-KVHILGHIPPGDGVC---L--EGWSINFYRIVNRFRSTIAGQFYGHTHIDEF 406 (577)
T ss_pred CC-EEEEEEeeCCCCcch---h--hhhhHHHHHHHHHHHHhhhhhccccCcceeE
Confidence 33 366789999854211 1 111233445555543 45679999998653
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.6e-08 Score=91.05 Aligned_cols=73 Identities=21% Similarity=0.103 Sum_probs=46.2
Q ss_pred EEEecCCCCCCcH----HHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-cCCeEEcCCCccc
Q 011679 163 GIIGDLGQTYNSL----STLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQPWIWSAGNHEI 235 (479)
Q Consensus 163 ~~~gD~~~~~~~~----~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~v~GNHD~ 235 (479)
+++||+|.+.... ..++.+.+. +||+|+++||++..--..... ....+.+.+.++.+.. ..|+++++||||.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~-~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~ 80 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDP-STLARSVAQAIRQVSDQGVPCYFMHGNRDF 80 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCC-CHHHHHHHHHHHHHHHCCCeEEEEcCCCch
Confidence 6899999875432 234444443 799999999999521000000 1122344555666654 4899999999997
Q ss_pred c
Q 011679 236 E 236 (479)
Q Consensus 236 ~ 236 (479)
.
T Consensus 81 ~ 81 (231)
T TIGR01854 81 L 81 (231)
T ss_pred h
Confidence 5
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.86 E-value=4e-08 Score=86.83 Aligned_cols=61 Identities=20% Similarity=0.108 Sum_probs=42.1
Q ss_pred eEEEEEecCCCCCCcHHHH-HHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccc
Q 011679 160 YKFGIIGDLGQTYNSLSTL-EHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~l-~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
+|++++||+|......+.+ +.+... ++|.|+++||++. ....+.++.+ ..|++++.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~-------------~~~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS-------------PFVLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC-------------HHHHHHHHHh--CCceEEEccCCCc
Confidence 5899999999766544443 334444 7999999999981 1122233332 4589999999996
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.77 E-value=8.7e-08 Score=91.54 Aligned_cols=175 Identities=15% Similarity=0.102 Sum_probs=88.9
Q ss_pred eEEEEEecCCCCC------CcHH----HHHHHHHhCCC-EEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEE
Q 011679 160 YKFGIIGDLGQTY------NSLS----TLEHYMESGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIW 228 (479)
Q Consensus 160 ~~f~~~gD~~~~~------~~~~----~l~~i~~~~pd-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 228 (479)
++|++++|+|... .... .++++.+.+|| +++.+||++....... +......++.+..--.-++
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~------~~~~~~~~~~l~~~g~d~~ 74 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST------ATKGEANIELMNALGYDAV 74 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh------ccCCcHHHHHHHhcCCCEE
Confidence 5899999999654 2233 34445555688 7799999996543211 1112223333333235667
Q ss_pred cCCCcccccccCCCccccccccccccccCc-------CC---CCCCCCcEEEEEeCCEE--EEEEcCCCCCC--------
Q 011679 229 SAGNHEIEYMTYMGEVVPFKSYLHRYPTPH-------LA---SKSSSPLWYAIRRASAH--IIVLSSYSPFV-------- 288 (479)
Q Consensus 229 v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~-------~~---~~~~~~~yysf~~g~~~--fi~Ldt~~~~~-------- 288 (479)
++||||+..... .+.........|. .. .......|..++.++++ |+.+.+.....
T Consensus 75 ~~GNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 75 TIGNHEFDYGLD-----ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred eeccccccccHH-----HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 889999864221 0111111111110 00 01112346667778754 55554421100
Q ss_pred --CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEeccccccee
Q 011679 289 --KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYER 360 (479)
Q Consensus 289 --~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 360 (479)
......+.+++..+.. +.+...+|++.|.+... ...+.+.+ .++|++|+||.|..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 150 GLPFEDLAEAVAVAEELL-AEGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred CceecCHHHHHHHHHHHH-hCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccC
Confidence 0012233343322221 25677899999987642 01121111 6899999999998654
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.4e-07 Score=82.20 Aligned_cols=74 Identities=23% Similarity=0.240 Sum_probs=44.5
Q ss_pred eEEEEEecCCCCCCcHHH-HHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-cCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNSLST-LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~-l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~v~GNHD~~ 236 (479)
||++++||+|.+....+. ++.+.+.++|.|+++||++........ ...++ ..+.++.+.. ..+++++.||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~--~~~~~-~~~~~~~l~~~~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPL--PEGYA-PKKVAELLNAYADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCC--ccccC-HHHHHHHHHhcCCceEEEccCCcch
Confidence 589999999976433333 333444589999999999863221000 01111 1223333322 35899999999964
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.8e-08 Score=90.58 Aligned_cols=57 Identities=25% Similarity=0.318 Sum_probs=35.3
Q ss_pred HHHHHHHh-CCCEEEEcCcccccCcccccccchhhh-HHHHHHHhhh-------------------ccCCeEEcCCCccc
Q 011679 177 TLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWD-SWGRFVERSA-------------------AYQPWIWSAGNHEI 235 (479)
Q Consensus 177 ~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~-~~~~~~~~~~-------------------~~~P~~~v~GNHD~ 235 (479)
.++.+... +||.|+++||++.. ++.+ +.+|. .+.++.+-+. ..+|++.++||||+
T Consensus 35 ~~~~~~~~l~Pd~V~fLGDLfd~-~w~~---D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDI 110 (193)
T cd08164 35 IVSMMQFWLKPDAVVVLGDLFSS-QWID---DEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDV 110 (193)
T ss_pred HHHHHHHhcCCCEEEEeccccCC-Cccc---HHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccC
Confidence 34444444 99999999999954 3321 23332 2223333221 13899999999999
Q ss_pred cc
Q 011679 236 EY 237 (479)
Q Consensus 236 ~~ 237 (479)
..
T Consensus 111 G~ 112 (193)
T cd08164 111 GY 112 (193)
T ss_pred CC
Confidence 64
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.74 E-value=3e-06 Score=85.56 Aligned_cols=43 Identities=23% Similarity=0.291 Sum_probs=31.0
Q ss_pred CCeEEEEEecCCCCCC---------cHHHHHH----HHHhCCCEEEEcCcccccCc
Q 011679 158 ASYKFGIIGDLGQTYN---------SLSTLEH----YMESGAQTVLFLGDLSYADR 200 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~---------~~~~l~~----i~~~~pd~vl~~GD~~y~~~ 200 (479)
+.+||++++|+|.+.. ...++++ +.+.++|+||++||++....
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~ 57 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENK 57 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCC
Confidence 4699999999998642 1223333 33449999999999997544
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.3e-07 Score=78.34 Aligned_cols=48 Identities=21% Similarity=0.388 Sum_probs=36.7
Q ss_pred CCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeee
Q 011679 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSY 362 (479)
Q Consensus 307 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~ 362 (479)
+...-.||+.|.|+++..... ..+.+++++++|+.++.||.|--.|-.
T Consensus 156 k~~~~fivM~HYPP~s~~~t~--------~~~sevlee~rv~~~lyGHlHgv~~p~ 203 (230)
T COG1768 156 KGVSKFIVMTHYPPFSDDGTP--------GPFSEVLEEGRVSKCLYGHLHGVPRPN 203 (230)
T ss_pred cCcCeEEEEEecCCCCCCCCC--------cchHHHHhhcceeeEEeeeccCCCCCC
Confidence 344458999999999765432 246678889999999999999876643
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.2e-07 Score=88.25 Aligned_cols=75 Identities=16% Similarity=0.057 Sum_probs=44.3
Q ss_pred EEEecCCCCCCcHH---HHHHHHH----hCCCEEEEcCcccccCcccccccchhhhH-HHHHHHhhhccCCeEEcCCCcc
Q 011679 163 GIIGDLGQTYNSLS---TLEHYME----SGAQTVLFLGDLSYADRYQFIDVGVRWDS-WGRFVERSAAYQPWIWSAGNHE 234 (479)
Q Consensus 163 ~~~gD~~~~~~~~~---~l~~i~~----~~pd~vl~~GD~~y~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~~~v~GNHD 234 (479)
+++||+|.+..... ....+.+ .++|.++++||++................ +...++......+++.+.||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 47899998764322 2233322 38999999999995321111100111111 2344455556789999999999
Q ss_pred ccc
Q 011679 235 IEY 237 (479)
Q Consensus 235 ~~~ 237 (479)
...
T Consensus 81 ~~~ 83 (217)
T cd07398 81 FLL 83 (217)
T ss_pred HHH
Confidence 853
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.64 E-value=7.5e-07 Score=85.27 Aligned_cols=174 Identities=17% Similarity=0.192 Sum_probs=87.6
Q ss_pred eEEEEEecCCCCC-------CcHHH----HHHHHHhCCC-EEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeE
Q 011679 160 YKFGIIGDLGQTY-------NSLST----LEHYMESGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWI 227 (479)
Q Consensus 160 ~~f~~~gD~~~~~-------~~~~~----l~~i~~~~pd-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 227 (479)
++|+.+.|+|.-. ..... ++++.+.+++ ++|.+||++...... . -.+.+...+.++.+ ..-+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~--~-~~~g~~~~~~l~~l---~~d~ 74 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS--T-ATKGKQMVPVLNAL---GVDL 74 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch--h-hcCCccHHHHHHhc---CCcE
Confidence 4788888888311 11233 3344444677 999999998543211 1 01112233333332 2346
Q ss_pred EcCCCcccccccCCCccccccccccccccCc---------C-CCCCCCCcEEEEEeCCEE--EEEEcCCCCC------C-
Q 011679 228 WSAGNHEIEYMTYMGEVVPFKSYLHRYPTPH---------L-ASKSSSPLWYAIRRASAH--IIVLSSYSPF------V- 288 (479)
Q Consensus 228 ~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~---------~-~~~~~~~~yysf~~g~~~--fi~Ldt~~~~------~- 288 (479)
.++||||+..... .+.........|. . .....-+.|..++.++++ |+.+.+.... .
T Consensus 75 ~~~GNHefd~g~~-----~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~ 149 (257)
T cd07406 75 ACFGNHEFDFGED-----QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPE 149 (257)
T ss_pred EeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCC
Confidence 7899999964211 0111111111110 0 000112467888888854 5555543210 0
Q ss_pred --CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEecccccce
Q 011679 289 --KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHVHAYE 359 (479)
Q Consensus 289 --~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 359 (479)
...+-.+.+++.+++..+.++..+|++.|.+... .. .+.++ .+||++|+||.|..+
T Consensus 150 ~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 150 YVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred cceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceEEecccceeE
Confidence 0112233344433222225678899999987521 11 22222 579999999999865
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.59 E-value=9.4e-07 Score=85.65 Aligned_cols=185 Identities=15% Similarity=0.103 Sum_probs=90.5
Q ss_pred eEEEEEecCCCCC-------------CcHHH----HHHHHHhCCCEEEE-cCcccccCcccccc---cchhhhHHHHHHH
Q 011679 160 YKFGIIGDLGQTY-------------NSLST----LEHYMESGAQTVLF-LGDLSYADRYQFID---VGVRWDSWGRFVE 218 (479)
Q Consensus 160 ~~f~~~gD~~~~~-------------~~~~~----l~~i~~~~pd~vl~-~GD~~y~~~~~~~~---~~~~~~~~~~~~~ 218 (479)
++|++.+|+|... ..... ++++.+.+|+.+++ +||++......... .....+...+.+.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln 80 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMN 80 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHH
Confidence 4788899988642 11222 33444447887776 99999643211000 0001122233333
Q ss_pred hhhccCCeEEcCCCcccccccCCCccccccccccccccCcC-------C-CCCCCCcEEEEEeC-CEEEEEEc--CCCC-
Q 011679 219 RSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHL-------A-SKSSSPLWYAIRRA-SAHIIVLS--SYSP- 286 (479)
Q Consensus 219 ~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~-------~-~~~~~~~yysf~~g-~~~fi~Ld--t~~~- 286 (479)
.+ -+-+.++||||+..... .+.........|.- . .......|..++.+ ++++-++- +...
T Consensus 81 ~~---g~d~~~lGNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 81 AL---GYDAGTLGNHEFNYGLD-----YLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred hc---CCCEEeecccCcccCHH-----HHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 33 23467789999864211 01111111111110 0 01112356677888 76554443 3210
Q ss_pred -C-----------CCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEec
Q 011679 287 -F-----------VKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAG 353 (479)
Q Consensus 287 -~-----------~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsG 353 (479)
+ ....+..++..++|++ .++..+|+++|.+....... ....+ .....+.++ .+||++|+|
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~-~~~~~---~~~~~la~~~~~vD~IlgG 225 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEE-SLTGE---NAAYELAEEVPGIDAILTG 225 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccc-ccCCc---cHHHHHHhcCCCCcEEEeC
Confidence 0 0111234444555554 46788999999877543210 00111 112234444 589999999
Q ss_pred ccccce
Q 011679 354 HVHAYE 359 (479)
Q Consensus 354 H~H~y~ 359 (479)
|.|...
T Consensus 226 HsH~~~ 231 (277)
T cd07410 226 HQHRRF 231 (277)
T ss_pred CCcccc
Confidence 999753
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.3e-06 Score=81.56 Aligned_cols=184 Identities=16% Similarity=0.099 Sum_probs=96.7
Q ss_pred EEEEecCCCCCCc-HHHHHHHHHh---CCCEEEEcCcccccCccccc-c--cc---hhhhHHHHHHHhhh-ccCCeEEcC
Q 011679 162 FGIIGDLGQTYNS-LSTLEHYMES---GAQTVLFLGDLSYADRYQFI-D--VG---VRWDSWGRFVERSA-AYQPWIWSA 230 (479)
Q Consensus 162 f~~~gD~~~~~~~-~~~l~~i~~~---~pd~vl~~GD~~y~~~~~~~-~--~~---~~~~~~~~~~~~~~-~~~P~~~v~ 230 (479)
|++.||.|..... +..+..+.+. ++|++|++||+.-....... . .. ..+..|.+.++... ..+|++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 5889999985432 2224444332 79999999999632111100 0 00 11233334444332 357789999
Q ss_pred CCcccccccCCCccccccccccccccCcCCCCCCCCcE-----EEEEeCCEEEEEEcCCC---CCC--------CChHHH
Q 011679 231 GNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLW-----YAIRRASAHIIVLSSYS---PFV--------KYTPQW 294 (479)
Q Consensus 231 GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~y-----ysf~~g~~~fi~Ldt~~---~~~--------~~~~Q~ 294 (479)
||||-... +. .++..+ ....+.+ ..+++++++|..|.... .+. ....++
T Consensus 81 GNHE~~~~-----------l~---~l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~ 145 (262)
T cd00844 81 GNHEASNY-----------LW---ELPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTK 145 (262)
T ss_pred CCCCCHHH-----------HH---hhcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHH
Confidence 99995311 00 011000 0011222 23557889999887521 111 112233
Q ss_pred HHH-------HHHHhhccCCCCCeEEEEeccccccCCCCccCc---------------CHHHHHHHHHHHHHcCccEEEe
Q 011679 295 EWL-------REELKKVDREKTPWLIVLMHVPIYNSNEAHFME---------------GESMRAAFESWFVRYKVDVVFA 352 (479)
Q Consensus 295 ~WL-------~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~---------------~~~~~~~l~~l~~~~~Vdlvls 352 (479)
..+ ...|.... ... -|+++|.|+.......... +..-...+..++++.+....|+
T Consensus 146 rs~y~~r~~~~~kl~~~~-~~v--DIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~ 222 (262)
T cd00844 146 RSAYHVRNIEVFKLKQLK-QPI--DIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFS 222 (262)
T ss_pred HHhhhhhHHHHHHHHhcC-CCC--cEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEE
Confidence 221 11222211 123 5999999998654321100 0112346778899999999999
Q ss_pred ccccc-ceeeee
Q 011679 353 GHVHA-YERSYR 363 (479)
Q Consensus 353 GH~H~-y~r~~~ 363 (479)
||.|. |++..|
T Consensus 223 gH~H~~f~~~~~ 234 (262)
T cd00844 223 AHLHVKFAALVP 234 (262)
T ss_pred ecCCcccceecC
Confidence 99998 565654
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.49 E-value=8.9e-07 Score=90.20 Aligned_cols=73 Identities=23% Similarity=0.109 Sum_probs=50.4
Q ss_pred eEEEEEecCCCCC-C--c-------H----HHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh-ccC
Q 011679 160 YKFGIIGDLGQTY-N--S-------L----STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-AYQ 224 (479)
Q Consensus 160 ~~f~~~gD~~~~~-~--~-------~----~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 224 (479)
+||++++|+|.+. . . . ..++.+.+.++||||++||+......+. .--..+.+.++.+. .++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~----~a~~~~~~~l~~l~~~~I 76 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSP----RALKLFLEALRRLKDAGI 76 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCH----HHHHHHHHHHHHhccCCC
Confidence 6899999999982 1 1 1 2344455569999999999997643321 11133445566654 379
Q ss_pred CeEEcCCCcccc
Q 011679 225 PWIWSAGNHEIE 236 (479)
Q Consensus 225 P~~~v~GNHD~~ 236 (479)
|++++.||||..
T Consensus 77 pv~~I~GNHD~~ 88 (390)
T COG0420 77 PVVVIAGNHDSP 88 (390)
T ss_pred cEEEecCCCCch
Confidence 999999999985
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.9e-06 Score=84.51 Aligned_cols=74 Identities=19% Similarity=0.112 Sum_probs=46.4
Q ss_pred eEEEEEecCCCCCCc---------HHHHHH----HHHhCCCEEEEcCcccccCcccccccchhhhHHHH-HHHhhh-ccC
Q 011679 160 YKFGIIGDLGQTYNS---------LSTLEH----YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGR-FVERSA-AYQ 224 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~---------~~~l~~----i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~-~~~~~~-~~~ 224 (479)
|||+++||+|.+... ...+++ +.+.+||+||++||++....... ........+ +++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~---~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAIT---QNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCC---HHHHHHHHHHHHHHHHHCCC
Confidence 689999999986431 123333 33459999999999985432111 111122222 244443 368
Q ss_pred CeEEcCCCcccc
Q 011679 225 PWIWSAGNHEIE 236 (479)
Q Consensus 225 P~~~v~GNHD~~ 236 (479)
|+++++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.6e-06 Score=80.59 Aligned_cols=92 Identities=18% Similarity=0.161 Sum_probs=47.1
Q ss_pred cEEEEEeCCEE--EEEEcCCC-CC--------C-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHH
Q 011679 267 LWYAIRRASAH--IIVLSSYS-PF--------V-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESM 334 (479)
Q Consensus 267 ~yysf~~g~~~--fi~Ldt~~-~~--------~-~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~ 334 (479)
.|.-++.++++ ||.+-+.. .. + ....-.+-+++.+++.+..++..+|++.|........... ....
T Consensus 138 py~i~~~~G~kIgviGl~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~ 215 (288)
T cd07412 138 PYTIKDVGGVKVGFIGAVTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAA 215 (288)
T ss_pred CEEEEEECCEEEEEEeecCCCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--cccc
Confidence 46667788754 55553321 00 0 0122233444444433224678899999987643221110 0001
Q ss_pred HHHHHHHHHH--cCccEEEeccccccee
Q 011679 335 RAAFESWFVR--YKVDVVFAGHVHAYER 360 (479)
Q Consensus 335 ~~~l~~l~~~--~~VdlvlsGH~H~y~r 360 (479)
......++.+ .++|++|+||.|....
T Consensus 216 ~~~~~~l~~~~~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 216 SGPIADIVNRLDPDVDVVFAGHTHQAYN 243 (288)
T ss_pred ChhHHHHHhhcCCCCCEEEeCccCcccc
Confidence 1122334444 4799999999998643
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.1e-06 Score=81.39 Aligned_cols=154 Identities=18% Similarity=0.142 Sum_probs=75.9
Q ss_pred HHHHHHh-CCCEE-EEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccc
Q 011679 178 LEHYMES-GAQTV-LFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYP 255 (479)
Q Consensus 178 l~~i~~~-~pd~v-l~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~ 255 (479)
++++.+. .+|.+ +.+||++...... .+......++.+.. .++.++.||||++.... .+....+.+.
T Consensus 42 v~~~~~~~~~~~l~l~~GD~~~gs~~~------~~~~g~~~~~~l~~-~g~da~~GNHefd~g~~-----~l~~~~~~~~ 109 (264)
T cd07411 42 IKRIRAERNPNTLLLDGGDTWQGSGEA------LYTRGQAMVDALNA-LGVDAMVGHWEFTYGPE-----RVRELFGRLN 109 (264)
T ss_pred HHHHHHhcCCCeEEEeCCCccCCChHH------hhcCChhHHHHHHh-hCCeEEecccccccCHH-----HHHHHHhhCC
Confidence 3444455 78877 5799999654321 11111222333322 45555559999864211 1111111111
Q ss_pred cCcCC--------CCCCCCcEEEEEeCCE--EEEEEcCCCCCC----------CChHHHHHHHHHHhhcc-CCCCCeEEE
Q 011679 256 TPHLA--------SKSSSPLWYAIRRASA--HIIVLSSYSPFV----------KYTPQWEWLREELKKVD-REKTPWLIV 314 (479)
Q Consensus 256 ~p~~~--------~~~~~~~yysf~~g~~--~fi~Ldt~~~~~----------~~~~Q~~WL~~~L~~~~-~~~~~w~Iv 314 (479)
+|.-. .......|..++.+++ -+|.+.+..... ......+.+++.+.+.. ..++..+|+
T Consensus 110 ~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~ 189 (264)
T cd07411 110 WPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVL 189 (264)
T ss_pred CCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 11100 0011124666778874 556665431100 01233445554433321 246788999
Q ss_pred EeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEecccccc
Q 011679 315 LMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHVHAY 358 (479)
Q Consensus 315 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y 358 (479)
+.|.+... .. .+.++ .+||++|+||.|..
T Consensus 190 l~H~g~~~--------~~-------~la~~~~~iDlilgGH~H~~ 219 (264)
T cd07411 190 LSHNGLPV--------DV-------ELAERVPGIDVILSGHTHER 219 (264)
T ss_pred EecCCchh--------hH-------HHHhcCCCCcEEEeCccccc
Confidence 99986531 11 12222 57999999999974
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.5e-06 Score=79.92 Aligned_cols=182 Identities=14% Similarity=0.119 Sum_probs=87.2
Q ss_pred eEEEEEecCCCCCC-------cHHHHHH----HHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEE
Q 011679 160 YKFGIIGDLGQTYN-------SLSTLEH----YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIW 228 (479)
Q Consensus 160 ~~f~~~gD~~~~~~-------~~~~l~~----i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 228 (479)
++++.++|+|.... ....+.. +.+.++++++.+||++...... . +......++.+..--.-+.
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~--~----~~~g~~~~~~ln~~g~d~~ 74 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPIS--D----LDKGETIIKIMNAVGYDAV 74 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhh--h----hcCCcHHHHHHHhcCCcEE
Confidence 47899999997421 2333333 3222578999999998543211 1 0111122333322222345
Q ss_pred cCCCcccccccCCCccccccccccccccCcCCC--------CCCCCcEEEEEeC-C--EEEEEEcCCC-C-----CC---
Q 011679 229 SAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS--------KSSSPLWYAIRRA-S--AHIIVLSSYS-P-----FV--- 288 (479)
Q Consensus 229 v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~~~~~yysf~~g-~--~~fi~Ldt~~-~-----~~--- 288 (479)
++||||++.... .+..+.+.+.+|.-.+ ...-..|.-++.+ + +-|+.+-+.. . ..
T Consensus 75 ~~GNHefd~G~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~ 149 (257)
T cd07408 75 TPGNHEFDYGLD-----RLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKD 149 (257)
T ss_pred ccccccccCCHH-----HHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCC
Confidence 789999864211 1111122222221100 0011235556777 5 5566665431 0 00
Q ss_pred C-ChHHHHHHHHH-HhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEeccccccee
Q 011679 289 K-YTPQWEWLREE-LKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYER 360 (479)
Q Consensus 289 ~-~~~Q~~WL~~~-L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 360 (479)
. ..+-.+-+++. .....+.++.-+|++.|.+...... ... ...+.. .-.++|++|.||.|....
T Consensus 150 ~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~----~~~--~~~la~--~~~giDvIigGH~H~~~~ 215 (257)
T cd07408 150 VTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSS----PWT--STELAA--NVTGIDLIIDGHSHTTIE 215 (257)
T ss_pred cEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCC----Ccc--HHHHHH--hCCCceEEEeCCCccccc
Confidence 0 01112223332 2221125678899999988654311 100 112222 125899999999998643
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.2e-05 Score=72.55 Aligned_cols=190 Identities=17% Similarity=0.183 Sum_probs=97.5
Q ss_pred EEEEEecCCCCCCcH---HHHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 161 KFGIIGDLGQTYNSL---STLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~---~~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
|++++||.=...+.. ..+..+.+. ++||+|..||++-.. ... . ....+.+..+ .+- +.+.|||+++
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg-~gl---~---~~~~~~L~~~--G~D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGG-KGI---T---PKIAKELLSA--GVD-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCC-CCC---C---HHHHHHHHhc--CCC-EEEecccccC
Confidence 588999986654432 234445444 799999999998643 111 1 1122222222 233 4566999996
Q ss_pred cccCCCcccccccccccc---ccCcCCC-CCCCCcEEEEEeCCEEEEEEcCCCCCC--CChHHHHHHHHHHhhccCCCCC
Q 011679 237 YMTYMGEVVPFKSYLHRY---PTPHLAS-KSSSPLWYAIRRASAHIIVLSSYSPFV--KYTPQWEWLREELKKVDREKTP 310 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~---~~p~~~~-~~~~~~yysf~~g~~~fi~Ldt~~~~~--~~~~Q~~WL~~~L~~~~~~~~~ 310 (479)
.. + ...+.... -.|.+-+ ......|..++.++.++-+++-..... ....-++-+++.+++.+ .+++
T Consensus 71 ~g----e---l~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk-~~~D 142 (255)
T cd07382 71 KK----E---ILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELK-EEAD 142 (255)
T ss_pred cc----h---HHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHh-cCCC
Confidence 42 1 11111111 1111111 111235777888876655544321111 11122334555555543 2567
Q ss_pred eEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEE-
Q 011679 311 WLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYIT- 389 (479)
Q Consensus 311 w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~- 389 (479)
.+||.+|.-.. .....+.. .-..+||+++.||+|...--..+ -++|+.||+
T Consensus 143 ~IIV~~H~g~t-----------sEk~ala~-~ldg~VdvIvGtHTHv~t~d~~i----------------l~~gTa~itd 194 (255)
T cd07382 143 IIFVDFHAEAT-----------SEKIALGW-YLDGRVSAVVGTHTHVQTADERI----------------LPGGTAYITD 194 (255)
T ss_pred EEEEEECCCCC-----------HHHHHHHH-hCCCCceEEEeCCCCccCCccEE----------------eeCCeEEEec
Confidence 89999997321 11112221 11346999999999986332221 136777887
Q ss_pred eCCCCCC
Q 011679 390 VGDGGNQ 396 (479)
Q Consensus 390 ~G~gG~~ 396 (479)
.|.-|..
T Consensus 195 ~Gm~G~~ 201 (255)
T cd07382 195 VGMTGPY 201 (255)
T ss_pred CccccCC
Confidence 4544544
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.28 E-value=6.5e-05 Score=71.43 Aligned_cols=195 Identities=19% Similarity=0.121 Sum_probs=103.9
Q ss_pred eEEEEEecCCCCCCc---HHHHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh-ccCCeEEcCCCcc
Q 011679 160 YKFGIIGDLGQTYNS---LSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-AYQPWIWSAGNHE 234 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~---~~~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~v~GNHD 234 (479)
+|++++||.=..... ...+..+.+. ++||+|..||++-. +... . . +..+.+. ..+-++. .|||+
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~g-G~Gi---~---~---~~~~~L~~~GvDviT-~GNH~ 69 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTH-GKGL---T---L---KIYEFLKQSGVNYIT-MGNHT 69 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCC-CCCC---C---H---HHHHHHHhcCCCEEE-ccchh
Confidence 589999998654321 2334455544 79999999999853 2111 1 1 1222222 2445554 49999
Q ss_pred cccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCC-CCC-C--ChHHHHHHHHHHhhccCCCCC
Q 011679 235 IEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYS-PFV-K--YTPQWEWLREELKKVDREKTP 310 (479)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~-~~~-~--~~~Q~~WL~~~L~~~~~~~~~ 310 (479)
++..................+.|... ....|..++.++..+-+++-.. .+. . ...-++-+++.+++.+ .+++
T Consensus 70 ~Dkge~~~~i~~~~~~lrpanyp~~~---pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk-~~~d 145 (266)
T TIGR00282 70 WFQKLILDVVINQKDLVRPLNFDTSF---AGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLK-KDCD 145 (266)
T ss_pred ccCcHHHHHHhccccccccCCCCCCC---CCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhh-cCCC
Confidence 97421000000000111111223211 1234566777876666655421 111 1 1112223444444432 2467
Q ss_pred eEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEE-
Q 011679 311 WLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYIT- 389 (479)
Q Consensus 311 w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~- 389 (479)
.+||.+|.-. ... +.....+-+.+|++|+.-|+|...--.++ -++|+.||+
T Consensus 146 ~IIVd~Haea-----------tsE-K~a~~~~ldg~vsaVvGtHtHV~TaD~~i----------------l~~gtayitD 197 (266)
T TIGR00282 146 LIFVDFHAET-----------TSE-KNAFGMAFDGYVTAVVGTHTHVPTADLRI----------------LPKGTAYITD 197 (266)
T ss_pred EEEEEeCCCC-----------HHH-HHHHHHHhCCCccEEEeCCCCCCCCccee----------------CCCCCEEEec
Confidence 8999999632 122 34456677889999999999986443322 247888998
Q ss_pred eCCCCCCC
Q 011679 390 VGDGGNQE 397 (479)
Q Consensus 390 ~G~gG~~~ 397 (479)
+|.-|...
T Consensus 198 ~Gm~G~~~ 205 (266)
T TIGR00282 198 VGMTGPFG 205 (266)
T ss_pred CCcccCcc
Confidence 66666543
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.9e-05 Score=67.52 Aligned_cols=63 Identities=21% Similarity=0.192 Sum_probs=43.3
Q ss_pred eEEEEEecCCCCCCc-HHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNS-LSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~-~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
++++++||+|..... ....+.....++|+|||+||.+..... .. ++.. -..++++|.||.|..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~---------~~----l~~~-~~~~i~~V~GN~D~~ 65 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL---------DA----LEGG-LAAKLIAVRGNCDGE 65 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch---------HH----hhcc-cccceEEEEccCCCc
Confidence 689999999997642 333444444599999999999964321 11 1110 145899999999985
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.3e-05 Score=77.76 Aligned_cols=174 Identities=16% Similarity=0.141 Sum_probs=87.0
Q ss_pred eEEEEEecCCCCC------------------CcHHH----HHHHHHhCCC-EEEEcCcccccCcccccccchhhhHHHHH
Q 011679 160 YKFGIIGDLGQTY------------------NSLST----LEHYMESGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRF 216 (479)
Q Consensus 160 ~~f~~~gD~~~~~------------------~~~~~----l~~i~~~~pd-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~ 216 (479)
++|+..+|+|... ..... ++++.+..++ +++.+||++....... ..+.+...+.
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~---~~~g~~~~~~ 77 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYT---LYKGNADAEF 77 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhh---hcCChHHHHH
Confidence 4788888888531 11222 3334434566 5667999986533211 0111222233
Q ss_pred HHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCC-----------CCCCCcEEEEEeCCEE--EEEEcC
Q 011679 217 VERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS-----------KSSSPLWYAIRRASAH--IIVLSS 283 (479)
Q Consensus 217 ~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~-----------~~~~~~yysf~~g~~~--fi~Ldt 283 (479)
+..+ ... +.++||||+++... .+..+.....+|.-.+ ......|..++.++++ ||.+-+
T Consensus 78 ln~~--g~D-~~~lGNHefd~G~~-----~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~ 149 (281)
T cd07409 78 MNLL--GYD-AMTLGNHEFDDGVE-----GLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTT 149 (281)
T ss_pred HHhc--CCC-EEEeccccccCCHH-----HHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEec
Confidence 3322 233 55779999974321 0111111111111100 0112346667888754 555544
Q ss_pred CCCC-------C-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEecc
Q 011679 284 YSPF-------V-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGH 354 (479)
Q Consensus 284 ~~~~-------~-~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH 354 (479)
.... + ...+..+.+++.+++.+..++..+|++.|...-. .. .+.++ .++|++|+||
T Consensus 150 ~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~------------d~---~la~~~~giD~IiggH 214 (281)
T cd07409 150 PDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV------------DK---EIARKVPGVDVIVGGH 214 (281)
T ss_pred CcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh------------HH---HHHHcCCCCcEEEeCC
Confidence 2110 0 0123345566655554334678899999976421 01 22222 5899999999
Q ss_pred cccce
Q 011679 355 VHAYE 359 (479)
Q Consensus 355 ~H~y~ 359 (479)
.|...
T Consensus 215 ~H~~~ 219 (281)
T cd07409 215 SHTFL 219 (281)
T ss_pred cCccc
Confidence 99864
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.8e-05 Score=82.87 Aligned_cols=80 Identities=16% Similarity=0.153 Sum_probs=52.1
Q ss_pred CCCeEEEEEecCCCCCCc--HHH----HHHHH---------HhCCCEEEEcCcccccCccccc--------ccchhhhHH
Q 011679 157 DASYKFGIIGDLGQTYNS--LST----LEHYM---------ESGAQTVLFLGDLSYADRYQFI--------DVGVRWDSW 213 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~~--~~~----l~~i~---------~~~pd~vl~~GD~~y~~~~~~~--------~~~~~~~~~ 213 (479)
...++++++||+|.+... ... ++.+. +.+++.+|++||++...+.... +...+++.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 357899999999977542 111 23333 3479999999999964221100 001122345
Q ss_pred HHHHHhhhccCCeEEcCCCcccc
Q 011679 214 GRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 214 ~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
.+.++.+...+|+++++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 56677777788999999999975
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.7e-06 Score=80.18 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=48.7
Q ss_pred eEEEEEecCCCCCCc---------HHHHHH----HHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-c-C
Q 011679 160 YKFGIIGDLGQTYNS---------LSTLEH----YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-Y-Q 224 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~---------~~~l~~----i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 224 (479)
|||+++||+|.+... ...++. +.+.++|+||++||++...... ......+.+.++.+.. . +
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~----~~~~~~~~~~l~~l~~~~~i 76 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPP----AEAQELFNAFFRNLSDANPI 76 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCC----HHHHHHHHHHHHHHHhcCCc
Confidence 689999999986431 122333 3344899999999999654321 1112334556666644 3 8
Q ss_pred CeEEcCCCcccc
Q 011679 225 PWIWSAGNHEIE 236 (479)
Q Consensus 225 P~~~v~GNHD~~ 236 (479)
|+++++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (253)
T TIGR00619 77 PIVVISGNHDSA 88 (253)
T ss_pred eEEEEccCCCCh
Confidence 999999999975
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.18 E-value=8.8e-06 Score=80.63 Aligned_cols=119 Identities=18% Similarity=0.196 Sum_probs=71.9
Q ss_pred CCCeEEEEEecCCCCCCc--------H------HHHHH---HHH--hCCCEEEEcCcccccCcccccccchhhhHHHHHH
Q 011679 157 DASYKFGIIGDLGQTYNS--------L------STLEH---YME--SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFV 217 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~~--------~------~~l~~---i~~--~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~ 217 (479)
+..+|++.++|.|.-.+. . .-+++ +.. .+||.++++||+..+..... +.+|....+-+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~---~eEf~~~~~Rf 122 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAG---DEEFKKRYERF 122 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCC---hHHHHHHHHHH
Confidence 468999999999875421 0 01121 111 19999999999997544322 34453322223
Q ss_pred Hhhh---ccCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCC
Q 011679 218 ERSA---AYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVK 289 (479)
Q Consensus 218 ~~~~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~ 289 (479)
+.+. .++|++.++||||+...... ...+..||.- ..++...+|+.|+..|+++|++...+.
T Consensus 123 kkIf~~k~~~~~~~i~GNhDIGf~~~~-----~~~~i~Rfe~------~fg~~~r~f~v~~~tf~~~d~~~ls~~ 186 (410)
T KOG3662|consen 123 KKIFGRKGNIKVIYIAGNHDIGFGNEL-----IPEWIDRFES------VFGPTERRFDVGNLTFVMFDSNALSGN 186 (410)
T ss_pred HHhhCCCCCCeeEEeCCcccccccccc-----chhHHHHHHH------hhcchhhhhccCCceeEEeeehhhcCC
Confidence 3332 36899999999999753211 1122333321 012356779999999999998754433
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.1e-05 Score=89.30 Aligned_cols=189 Identities=14% Similarity=0.126 Sum_probs=94.1
Q ss_pred CCeEEEEEecCCCCCCcHHH----HHHHHHhCCCEEEE-cCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCC
Q 011679 158 ASYKFGIIGDLGQTYNSLST----LEHYMESGAQTVLF-LGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~~~~----l~~i~~~~pd~vl~-~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GN 232 (479)
..++|++++|+|........ ++++.+.+|+.+++ +||++...... . ..+.. ..++.+..--.-++++||
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~--~-~~~g~---~~~~~ln~lg~d~~~~GN 732 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYS--N-LLKGL---PVLKMMKEMGYDASTFGN 732 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchh--h-hcCCh---HHHHHHhCcCCCEEEecc
Confidence 56999999999966433333 44455558887765 99998543211 0 01112 233333332344679999
Q ss_pred cccccccCC-----Cccc---cccccc-ccccc-------CcCC-CCCCCCcEEEEEeCCE--EEEEEcCCC-CC----C
Q 011679 233 HEIEYMTYM-----GEVV---PFKSYL-HRYPT-------PHLA-SKSSSPLWYAIRRASA--HIIVLSSYS-PF----V 288 (479)
Q Consensus 233 HD~~~~~~~-----~~~~---~~~~~~-~~~~~-------p~~~-~~~~~~~yysf~~g~~--~fi~Ldt~~-~~----~ 288 (479)
||++..... .... .-..|. ..|.+ ...+ .......|.-++.+++ -||.+-+.. .. .
T Consensus 733 HEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p~ 812 (1163)
T PRK09419 733 HEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSPG 812 (1163)
T ss_pred cccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCCC
Confidence 998643210 0000 000000 00110 0000 0011235667788874 456665421 00 0
Q ss_pred -----CChHHHHHHHHHHhhcc-CCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEecccccce
Q 011679 289 -----KYTPQWEWLREELKKVD-REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHVHAYE 359 (479)
Q Consensus 289 -----~~~~Q~~WL~~~L~~~~-~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 359 (479)
...+..+.+++..++.+ ..++..+|++.|......... .++ ....+.++ .+||++|.||+|..-
T Consensus 813 ~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~~-----~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 813 NVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GEI-----TGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred CcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--ccc-----HHHHHHHhCCCCCEEEeCCCCccc
Confidence 01122333444433332 146788999999986532111 011 12334443 479999999999753
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00017 Score=69.74 Aligned_cols=184 Identities=15% Similarity=0.156 Sum_probs=90.1
Q ss_pred CCeEEEEEecCCCCCC----------c----HHHHHHHHH----hCCC-EEEEcCcccccCcccccccchhhhHHHHHHH
Q 011679 158 ASYKFGIIGDLGQTYN----------S----LSTLEHYME----SGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFVE 218 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~----------~----~~~l~~i~~----~~pd-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~ 218 (479)
..++|++.+|+|.... . .+.++++.+ .+++ ++|..||++......... ...+....+.+.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~-~~~g~~~~~~mN 82 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDAS-PPPGSYSNPIFR 82 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeee-cCCChHHHHHHH
Confidence 5799999999996421 1 112233322 2455 678899999654322110 112333333333
Q ss_pred hhhccCCeEEcCCCcccccccCCCccccccccccccccCcC--------CC---CCCCCcEEEEEeC-CE--EEEEEcCC
Q 011679 219 RSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHL--------AS---KSSSPLWYAIRRA-SA--HIIVLSSY 284 (479)
Q Consensus 219 ~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~--------~~---~~~~~~yysf~~g-~~--~fi~Ldt~ 284 (479)
.+ --=.+++||||++..... ...+..+......|.- +. ......|..++.+ ++ -+|.+-+.
T Consensus 83 ~m---gyDa~tlGNHEFd~g~~~--l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~ 157 (282)
T cd07407 83 MM---PYDLLTIGNHELYNYEVA--DDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFD 157 (282)
T ss_pred hc---CCcEEeecccccCccccH--HHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEecc
Confidence 32 123678999999632110 0000001111111110 00 0112346666775 64 45666442
Q ss_pred CC-CC------CC--hHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHc-Ccc-EEEec
Q 011679 285 SP-FV------KY--TPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVD-VVFAG 353 (479)
Q Consensus 285 ~~-~~------~~--~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~Vd-lvlsG 353 (479)
.. .. .. ..+.+|+.+.|++ .++..+|+++|....... + ..+....+.++. ++| ++|+|
T Consensus 158 ~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~~la~~~~~id~~Ii~G 226 (282)
T cd07407 158 FKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHDAIRKIFPDTPIQFLGG 226 (282)
T ss_pred cccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHHHHHHhCCCCCEEEEeC
Confidence 21 00 01 1233488877875 457889999998764321 1 111112233333 577 79999
Q ss_pred ccccc
Q 011679 354 HVHAY 358 (479)
Q Consensus 354 H~H~y 358 (479)
|+|..
T Consensus 227 HsH~~ 231 (282)
T cd07407 227 HSHVR 231 (282)
T ss_pred Ccccc
Confidence 99974
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.10 E-value=3.1e-05 Score=75.24 Aligned_cols=187 Identities=14% Similarity=0.091 Sum_probs=85.7
Q ss_pred eEEEEEecCCCCCC-------cH----HHHHHHHHh-----CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhcc
Q 011679 160 YKFGIIGDLGQTYN-------SL----STLEHYMES-----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY 223 (479)
Q Consensus 160 ~~f~~~gD~~~~~~-------~~----~~l~~i~~~-----~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (479)
++|+..+|+|.... .. ..++++.+. ..-+++.+||++...... . ........+.+..+ .
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~--~-~~~g~~~~~~~n~~--g 75 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPES--D-LQDAEPDFRGMNLV--G 75 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhH--H-hcCcchHHHHHHhh--C
Confidence 47899999987521 11 223334332 234889999998533211 1 01111112223322 2
Q ss_pred CCeEEcCCCcccccccCCCccccccccccccccCcCC-------CCCCCCcEEEEEeCCEE--EEEEcCCCC-C--C---
Q 011679 224 QPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLA-------SKSSSPLWYAIRRASAH--IIVLSSYSP-F--V--- 288 (479)
Q Consensus 224 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~~~~yysf~~g~~~--fi~Ldt~~~-~--~--- 288 (479)
. =..++||||+++.... +........+|.-. .......|.-++.++++ ||.+-+... . .
T Consensus 76 ~-Da~~~GNHEfD~G~~~-----L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~ 149 (285)
T cd07405 76 Y-DAMAVGNHEFDNPLEV-----LRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAY 149 (285)
T ss_pred C-cEEeecccccccCHHH-----HHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCC
Confidence 2 3457799999753211 11111110111100 00112346667788755 455543211 0 0
Q ss_pred -CC---hHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccce
Q 011679 289 -KY---TPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYE 359 (479)
Q Consensus 289 -~~---~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 359 (479)
.+ .+..+=+++.+++.+..++.-+|+++|.......... ........+.+.+...++|++|.||.|...
T Consensus 150 ~~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~--~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 150 FEGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHG--SNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCcccc--ccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 00 1122222222222221467889999998875322110 000111123333323589999999999854
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.09 E-value=6.4e-05 Score=79.49 Aligned_cols=188 Identities=15% Similarity=0.110 Sum_probs=100.4
Q ss_pred CCCCCeEEEEEecCCCCCC------------cHHH----HHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHH
Q 011679 155 DPDASYKFGIIGDLGQTYN------------SLST----LEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFV 217 (479)
Q Consensus 155 ~~~~~~~f~~~gD~~~~~~------------~~~~----l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~ 217 (479)
.....++|+..+|+|.... .... ++++.+. +..++|.+||++........ ....+...+.+
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~--~~~g~~~~~~m 99 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY--LTKGEPTVDLL 99 (517)
T ss_pred cCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc--ccCCChHHHHH
Confidence 3357899999999997543 2222 2333333 55689999999965332211 12222233334
Q ss_pred HhhhccCCeEEcCCCcccccccCCCccccccccccccccCc---------CCCCCCCCcEEEEEeCCE--EEEEEcCCC-
Q 011679 218 ERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPH---------LASKSSSPLWYAIRRASA--HIIVLSSYS- 285 (479)
Q Consensus 218 ~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~~~yysf~~g~~--~fi~Ldt~~- 285 (479)
..+ -.=..+.||||+.+... .+..+......|. .......+.|.-++.+++ -+|.+.+..
T Consensus 100 N~m---~yDa~tiGNHEFd~g~~-----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~ 171 (517)
T COG0737 100 NAL---GYDAMTLGNHEFDYGLE-----ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTI 171 (517)
T ss_pred hhc---CCcEEeecccccccCHH-----HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcc
Confidence 333 23367899999975321 0111111111121 001122346888888874 566666411
Q ss_pred -CC---C-----CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccc
Q 011679 286 -PF---V-----KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVH 356 (479)
Q Consensus 286 -~~---~-----~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H 356 (479)
.+ . ...+..+++++.+.+.+.....-+|++.|.+........... ..... +.. .++|+++.||.|
T Consensus 172 ~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~-~~~~~----~~~-~~iD~i~~GH~H 245 (517)
T COG0737 172 PTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEV-PGDVD----VAV-PGIDLIIGGHSH 245 (517)
T ss_pred cccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccc-ccccc----ccc-cCcceEeccCCc
Confidence 11 1 123456677777666543447889999999886543321110 00000 000 449999999999
Q ss_pred cc
Q 011679 357 AY 358 (479)
Q Consensus 357 ~y 358 (479)
.+
T Consensus 246 ~~ 247 (517)
T COG0737 246 TV 247 (517)
T ss_pred cc
Confidence 64
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.05 E-value=5.3e-06 Score=76.64 Aligned_cols=66 Identities=20% Similarity=0.152 Sum_probs=40.2
Q ss_pred EEEecCCCCCCcHHHHHHHH---------HhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhh-----hccCCeEE
Q 011679 163 GIIGDLGQTYNSLSTLEHYM---------ESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS-----AAYQPWIW 228 (479)
Q Consensus 163 ~~~gD~~~~~~~~~~l~~i~---------~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-----~~~~P~~~ 228 (479)
+++||+|........+-... ..+.|.++++||++...... ....+.+..+ ....++++
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~--------~~vl~~l~~l~~~~~~~~~~v~~ 72 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDV--------IEILWLLYKLEQEAAKAGGKVHF 72 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCH--------HHHHHHHHHHHHHHHhcCCeEEE
Confidence 37999998754433322221 12579999999999643221 1222233222 23468999
Q ss_pred cCCCcccc
Q 011679 229 SAGNHEIE 236 (479)
Q Consensus 229 v~GNHD~~ 236 (479)
+.||||..
T Consensus 73 l~GNHE~~ 80 (208)
T cd07425 73 LLGNHELM 80 (208)
T ss_pred eeCCCcHH
Confidence 99999985
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.3e-05 Score=81.66 Aligned_cols=73 Identities=18% Similarity=0.165 Sum_probs=46.9
Q ss_pred eEEEEEecCCCCCCc---------HHHHH----HHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-cCC
Q 011679 160 YKFGIIGDLGQTYNS---------LSTLE----HYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQP 225 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~---------~~~l~----~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~P 225 (479)
|||+++||+|.+... ...++ .+.+.+||+||++||++...... ......+.+++..+.. .+|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~----~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPP----SYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCc----HHHHHHHHHHHHHHHhcCCc
Confidence 689999999986421 11122 33345999999999998543211 1111233445555543 589
Q ss_pred eEEcCCCcccc
Q 011679 226 WIWSAGNHEIE 236 (479)
Q Consensus 226 ~~~v~GNHD~~ 236 (479)
+++++||||..
T Consensus 77 v~~I~GNHD~~ 87 (407)
T PRK10966 77 LVVLAGNHDSV 87 (407)
T ss_pred EEEEcCCCCCh
Confidence 99999999975
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.7e-05 Score=72.79 Aligned_cols=68 Identities=19% Similarity=0.119 Sum_probs=40.9
Q ss_pred EEecCCCCCCcH---HHHHH-HHHh--CCCEEEEcCcccccCcccccccchhhhHHH----HHHHhhh-ccCCeEEcCCC
Q 011679 164 IIGDLGQTYNSL---STLEH-YMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWG----RFVERSA-AYQPWIWSAGN 232 (479)
Q Consensus 164 ~~gD~~~~~~~~---~~l~~-i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~----~~~~~~~-~~~P~~~v~GN 232 (479)
++||.|.+.... ..+.. +... +.|.+.++||++.. +.. +..|.+.. ..+..+. ...|+|.+.||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~--w~g---~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN 76 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDG--WIG---DDEPPQLHRQVAQKLLRLARKGTRVYYIHGN 76 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhh--hhc---CCcccHHHHHHHHHHHHHHhcCCeEEEecCc
Confidence 689999984332 22223 3333 55999999999953 221 12233322 2233333 35899999999
Q ss_pred cccc
Q 011679 233 HEIE 236 (479)
Q Consensus 233 HD~~ 236 (479)
||+.
T Consensus 77 ~Dfl 80 (237)
T COG2908 77 HDFL 80 (237)
T ss_pred hHHH
Confidence 9974
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.87 E-value=3.5e-05 Score=66.90 Aligned_cols=64 Identities=16% Similarity=0.231 Sum_probs=40.1
Q ss_pred EEEecCCCCCC-cHHHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhh-hccCCeEEcCCCcc
Q 011679 163 GIIGDLGQTYN-SLSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS-AAYQPWIWSAGNHE 234 (479)
Q Consensus 163 ~~~gD~~~~~~-~~~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~~~v~GNHD 234 (479)
+++||.+.... ....++.+.+. ..|++|++||+.-.... . +.|.+++..- ...+|.|++-|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~-----~---~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDED-----D---EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccc-----h---hhHHHHhcCCccCCCCEEEECCCCC
Confidence 36889877543 23344444333 78999999999954321 1 2344444332 34689999999997
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00015 Score=77.21 Aligned_cols=187 Identities=15% Similarity=0.113 Sum_probs=88.5
Q ss_pred CCCeEEEEEecCCCCCC-------cHHH----HHHHHHh-----CCCEEEEcCcccccCcccccccchhhhHHHHHHHhh
Q 011679 157 DASYKFGIIGDLGQTYN-------SLST----LEHYMES-----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS 220 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~-------~~~~----l~~i~~~-----~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~ 220 (479)
...++|++.+|+|.... .... ++++.+. ..-++|..||++...... . -.......+.+..+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s--~-~~~g~~~i~~mN~~ 108 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPES--D-LQDAEPDFRGMNLI 108 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhh--h-hcCCchhHHHHhcC
Confidence 35899999999998632 1222 2333321 235789999998542211 1 00111122223222
Q ss_pred hccCCeEEcCCCcccccccCCCccccccccccccccCcC-------C-CCCCCCcEEEEEeCCEE--EEEEcCCCC--C-
Q 011679 221 AAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHL-------A-SKSSSPLWYAIRRASAH--IIVLSSYSP--F- 287 (479)
Q Consensus 221 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~-------~-~~~~~~~yysf~~g~~~--fi~Ldt~~~--~- 287 (479)
. .=+.++||||+++.... +........+|.- . ....-..|.-++.++++ ||.+-+... +
T Consensus 109 --g-~Da~tlGNHEFD~G~~~-----L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 109 --G-YDAMAVGNHEFDNPLSV-----LRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred --C-CCEEcccccccCcCHHH-----HHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 2 23567899999753210 0111111111110 0 00112346667888754 555543211 0
Q ss_pred ------C-CChHHHHHHHHHHhhccC-CCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH---cCccEEEecccc
Q 011679 288 ------V-KYTPQWEWLREELKKVDR-EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR---YKVDVVFAGHVH 356 (479)
Q Consensus 288 ------~-~~~~Q~~WL~~~L~~~~~-~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~---~~VdlvlsGH~H 356 (479)
+ ...+..+-+++..++.+. .+..-+|+++|.......... ...... ..+.++ .+||++|.||.|
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~--~~~~~d---~~la~~~~~~~IDvIlgGHsH 255 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG--SNAPGD---VEMARSLPAGGLDMIVGGHSQ 255 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC--CCCccH---HHHHHhCCccCceEEEeCCCC
Confidence 0 011122223333333221 467889999998875322110 000000 233333 379999999999
Q ss_pred cce
Q 011679 357 AYE 359 (479)
Q Consensus 357 ~y~ 359 (479)
..-
T Consensus 256 ~~~ 258 (551)
T PRK09558 256 DPV 258 (551)
T ss_pred ccc
Confidence 753
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00025 Score=69.66 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=25.9
Q ss_pred CCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEecccccce
Q 011679 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHVHAYE 359 (479)
Q Consensus 307 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 359 (479)
.+..-+|+++|..-+. .. ..+.++ .+||++|.||+|.+-
T Consensus 206 ~gvD~II~LsH~g~~~-------~d-------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS-------IE-------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc-------hH-------HHHHhcCCCCCEEEeCCCCccC
Confidence 4577899999973111 11 123444 379999999999863
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00036 Score=74.17 Aligned_cols=145 Identities=20% Similarity=0.146 Sum_probs=71.0
Q ss_pred CCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCC-----
Q 011679 186 AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLA----- 260 (479)
Q Consensus 186 pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~----- 260 (479)
.-++|.+||++....... -...+. .++.+..---=+.++||||+++... .+..+.....+|.-.
T Consensus 50 n~l~ldaGD~~~gs~~~~---~~~g~~---~i~~~N~~g~Da~~lGNHEFd~G~~-----~l~~~~~~~~fp~l~aNv~~ 118 (550)
T TIGR01530 50 NALVLHAGDAIIGTLYFT---LFGGRA---DAALMNAAGFDFFTLGNHEFDAGNE-----GLKEFLEPLEIPVLSANVIP 118 (550)
T ss_pred CeEEEECCCCCCCccchh---hcCCHH---HHHHHhccCCCEEEeccccccCCHH-----HHHHHHHhCCCCEEEEeeec
Confidence 358889999996432210 011111 2222222223467899999975321 011111111111100
Q ss_pred ---C--CCCCCcEEEEEeCC--EEEEEEcCCCC-C---CCC-----hHHHHHHH---HHHhhccCCCCCeEEEEeccccc
Q 011679 261 ---S--KSSSPLWYAIRRAS--AHIIVLSSYSP-F---VKY-----TPQWEWLR---EELKKVDREKTPWLIVLMHVPIY 321 (479)
Q Consensus 261 ---~--~~~~~~yysf~~g~--~~fi~Ldt~~~-~---~~~-----~~Q~~WL~---~~L~~~~~~~~~w~Iv~~H~P~~ 321 (479)
. ...-..|.-++.++ +-||.|.+... . ..+ ....+=++ +.|++ ....-+|+++|....
T Consensus 119 ~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~---~g~D~II~lsH~g~~ 195 (550)
T TIGR01530 119 DAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQ---QGINKIILLSHAGFE 195 (550)
T ss_pred CCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHh---CCCCEEEEEecCCcH
Confidence 0 01123566777877 56777754211 0 010 11112122 34443 457889999997532
Q ss_pred cCCCCccCcCHHHHHHHHHHHHH-cCccEEEecccccce
Q 011679 322 NSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHVHAYE 359 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 359 (479)
. . ..+.++ .+||++|+||+|.+-
T Consensus 196 ~--------d-------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 196 K--------N-------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred H--------H-------HHHHhcCCCCCEEEeCCCCccc
Confidence 1 0 123333 479999999999964
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00026 Score=67.96 Aligned_cols=176 Identities=21% Similarity=0.233 Sum_probs=99.3
Q ss_pred eEEEEEecCCCCCC-cHHHHHHHHHh---CCCEEEEcCcccccCccc---ccccchhhhHHHHHHH----hhhccCCeEE
Q 011679 160 YKFGIIGDLGQTYN-SLSTLEHYMES---GAQTVLFLGDLSYADRYQ---FIDVGVRWDSWGRFVE----RSAAYQPWIW 228 (479)
Q Consensus 160 ~~f~~~gD~~~~~~-~~~~l~~i~~~---~pd~vl~~GD~~y~~~~~---~~~~~~~~~~~~~~~~----~~~~~~P~~~ 228 (479)
+|+++-||+|..-+ -++++..+.+. +.|++|++||+---.... .-.+...+.....++. +..+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 68999999998754 35667777766 899999999996422211 0012233333333332 3345688999
Q ss_pred cCCCcccccccCCCccccccccccccccCcCCCCCCCCcEE-----EEEeCCEEEEEEcCC---CCCCC-------C---
Q 011679 229 SAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWY-----AIRRASAHIIVLSSY---SPFVK-------Y--- 290 (479)
Q Consensus 229 v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yy-----sf~~g~~~fi~Ldt~---~~~~~-------~--- 290 (479)
+=||||..+ |+. .+|..+ -...+.|| ..++|++++-+|..- .+|.. .
T Consensus 81 IGGNHEAsn------------yL~--eLpyGG-wVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~s 145 (456)
T KOG2863|consen 81 IGGNHEASN------------YLQ--ELPYGG-WVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNS 145 (456)
T ss_pred ecCchHHHH------------HHH--hcccCc-eeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccch
Confidence 999999742 111 122211 11124444 257789999888751 11110 0
Q ss_pred -------hHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHH-----------------HHHHHHHHHHHcC
Q 011679 291 -------TPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGES-----------------MRAAFESWFVRYK 346 (479)
Q Consensus 291 -------~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~-----------------~~~~l~~l~~~~~ 346 (479)
-.+.+ ...|.+. +.+--|.++|.=+-+...+ ++... -...+++||++.+
T Consensus 146 tiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~~y--Gd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~Lk 218 (456)
T KOG2863|consen 146 TIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIYYY--GDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLK 218 (456)
T ss_pred hhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchhhc--CCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhC
Confidence 11111 1223332 2334588888644332221 11111 1236778999999
Q ss_pred ccEEEeccccc
Q 011679 347 VDVVFAGHVHA 357 (479)
Q Consensus 347 VdlvlsGH~H~ 357 (479)
...+|+.|.|+
T Consensus 219 P~yWfsAHLH~ 229 (456)
T KOG2863|consen 219 PQYWFSAHLHV 229 (456)
T ss_pred cchhhhhhHhh
Confidence 99999999997
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.62 E-value=8.6e-05 Score=66.49 Aligned_cols=49 Identities=22% Similarity=0.225 Sum_probs=31.5
Q ss_pred hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 184 ~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
.+||.++++||++....... ...+.... ........+|++.++||||..
T Consensus 40 ~~~d~lii~GDl~~~~~~~~---~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 40 YGPERLIILGDLKHSFGGLS---RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred cCCCEEEEeCcccccccccC---HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 49999999999996533211 11111111 233334578999999999975
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0011 Score=72.56 Aligned_cols=197 Identities=15% Similarity=0.070 Sum_probs=91.7
Q ss_pred CCCCCCCCCCeEEEEEecCCCCCC-------------cHHH----HHHHHHhCC-CEEEEcCcccccCcccccccchhh-
Q 011679 150 TPPKIDPDASYKFGIIGDLGQTYN-------------SLST----LEHYMESGA-QTVLFLGDLSYADRYQFIDVGVRW- 210 (479)
Q Consensus 150 T~p~~~~~~~~~f~~~gD~~~~~~-------------~~~~----l~~i~~~~p-d~vl~~GD~~y~~~~~~~~~~~~~- 210 (479)
+.|..+....++|+..+|+|.... .... ++++.+..+ -++|..||++..... .++....
T Consensus 106 ~~~~~~~~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl--~~~~a~~~ 183 (814)
T PRK11907 106 SKPVEGQTVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPL--GTYKAIVD 183 (814)
T ss_pred CCCccCCceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcc--cchhhhcc
Confidence 344444456899999999997521 1112 333333333 478999999965332 1110000
Q ss_pred ----hHHHHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCC--------CCCCCcEEEEEe-----
Q 011679 211 ----DSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS--------KSSSPLWYAIRR----- 273 (479)
Q Consensus 211 ----~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~~~~~yysf~~----- 273 (479)
......++.+..---=..++||||+++.... +..+.....+|.-.+ ...-..|--++.
T Consensus 184 ~~~~g~~~P~i~amN~LGyDA~tLGNHEFDyG~d~-----L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~ 258 (814)
T PRK11907 184 PVEEGEQHPMYAALEALGFDAGTLGNHEFNYGLDY-----LEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDT 258 (814)
T ss_pred ccccCcchHHHHHHhccCCCEEEechhhcccCHHH-----HHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEecC
Confidence 0001122222221223578999999753210 111111111121100 001123444443
Q ss_pred CC------EEEEEEcCCCC--CC----C----ChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHH
Q 011679 274 AS------AHIIVLSSYSP--FV----K----YTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAA 337 (479)
Q Consensus 274 g~------~~fi~Ldt~~~--~~----~----~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~ 337 (479)
++ +-||++-+..- |. . ..+-.+.+++...+.+...++-+|++.|..+.........++ ..
T Consensus 259 ~G~~~~vKIGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En--~~-- 334 (814)
T PRK11907 259 EGKKVTLNIGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEEN--VG-- 334 (814)
T ss_pred CCcccceEEEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccc--hh--
Confidence 32 55676644211 10 0 112233333333333225688899999987643211111111 11
Q ss_pred HHHHHHHcCccEEEecccccc
Q 011679 338 FESWFVRYKVDVVFAGHVHAY 358 (479)
Q Consensus 338 l~~l~~~~~VdlvlsGH~H~y 358 (479)
..+.+--+||++|.||.|..
T Consensus 335 -~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 335 -YQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred -hHHhcCCCCCEEEECCCCCc
Confidence 12223358999999999984
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00016 Score=67.93 Aligned_cols=70 Identities=19% Similarity=0.275 Sum_probs=43.1
Q ss_pred eEEEEEecCCCCCCcH-HHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNSL-STLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~-~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
++++++||+|...... +.++.+... ..|.++++||++...... -+.+...++.+....++++++||||..
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s-------~~v~~~l~~~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRS-------KDVVNYIFDLMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCCh-------HHHHHHHHHHhhcCCCeEEEECCcHHH
Confidence 4789999999754332 223334332 259999999999753211 122223333223345899999999974
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00034 Score=67.27 Aligned_cols=67 Identities=25% Similarity=0.318 Sum_probs=42.9
Q ss_pred eEEEEEecCCCCCCcHHH-HHHHH-HhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNSLST-LEHYM-ESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~-l~~i~-~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
|+++++||+|........ ++.+. +.+.|.++++||++.....+ ....+.+..+ ..+++++.||||..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s--------~~vl~~l~~l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDS--------LEVLRFVKSL--GDSAVTVLGNHDLH 69 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCH--------HHHHHHHHhc--CCCeEEEecChhHH
Confidence 478999999987554332 33332 12679999999999753211 2222333332 34688999999985
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.046 Score=50.39 Aligned_cols=193 Identities=18% Similarity=0.254 Sum_probs=104.8
Q ss_pred eEEEEEecCCCCCCcHH---HHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccc
Q 011679 160 YKFGIIGDLGQTYNSLS---TLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~---~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
+|++++||+=...+... -+..+.+. ++||||..|-++-.. . .--|+.|.++++. .+- +.+.|||=+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G-~-----Git~k~y~~l~~~---G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGG-F-----GITEKIYKELLEA---GAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCC-c-----CCCHHHHHHHHHh---CCC-EEecccccc
Confidence 58999999866654332 23444444 899999999998542 2 2233555554443 232 468999998
Q ss_pred ccccCCCccccccccccccccCcCCCC-CCCCcEEEEEeCCEEEEEEcCCCCC-C--CChHHHHHHHHHHhhccCCCCCe
Q 011679 236 EYMTYMGEVVPFKSYLHRYPTPHLASK-SSSPLWYAIRRASAHIIVLSSYSPF-V--KYTPQWEWLREELKKVDREKTPW 311 (479)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~yysf~~g~~~fi~Ldt~~~~-~--~~~~Q~~WL~~~L~~~~~~~~~w 311 (479)
... .. ..|-.-..++--|.+-+. ..+..|+-|+..+..+.+++-.... . ....-+.-+++.|.+.+ .+++.
T Consensus 71 d~~-ei---~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~-~~~~~ 145 (266)
T COG1692 71 DQK-EI---LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIK-LGTDL 145 (266)
T ss_pred cch-HH---HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCc-cCCce
Confidence 521 10 011111112222333221 2234577777777666665542211 0 11223444556565543 44578
Q ss_pred EEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEE-e
Q 011679 312 LIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYIT-V 390 (479)
Q Consensus 312 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~-~ 390 (479)
+||-+|.---+.. ..| -++-+.+|.+|+-=|+|....-.++ -++|+.||+ .
T Consensus 146 iiVDFHAEtTSEK-----------~a~-g~yldGrvsavvGTHTHV~TaD~rI----------------L~~GTayiTDv 197 (266)
T COG1692 146 IIVDFHAETTSEK-----------NAF-GWYLDGRVSAVVGTHTHVPTADERI----------------LPKGTAYITDV 197 (266)
T ss_pred EEEEccccchhhh-----------hhh-heEEcCeEEEEEeccCcccccccee----------------cCCCcEEEecC
Confidence 8999996332211 111 2233457889999999986544432 247788887 5
Q ss_pred CCCCC
Q 011679 391 GDGGN 395 (479)
Q Consensus 391 G~gG~ 395 (479)
|.-|.
T Consensus 198 GMtG~ 202 (266)
T COG1692 198 GMTGP 202 (266)
T ss_pred ccccc
Confidence 54443
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0004 Score=65.48 Aligned_cols=69 Identities=28% Similarity=0.340 Sum_probs=43.4
Q ss_pred eEEEEEecCCCCCCcHHH-HHHHH---Hh-------CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEE
Q 011679 160 YKFGIIGDLGQTYNSLST-LEHYM---ES-------GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIW 228 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~-l~~i~---~~-------~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 228 (479)
+|++++||+|........ ++.+. +. +.|.++++||++..... .....+.+..+.....+++
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~--------s~evl~~l~~l~~~~~~~~ 72 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPD--------SPEVLRLVMSMVAAGAALC 72 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCC--------HHHHHHHHHHHhhCCcEEE
Confidence 379999999987654332 33331 10 25899999999975321 1223344444433346889
Q ss_pred cCCCcccc
Q 011679 229 SAGNHEIE 236 (479)
Q Consensus 229 v~GNHD~~ 236 (479)
+.||||..
T Consensus 73 v~GNHE~~ 80 (234)
T cd07423 73 VPGNHDNK 80 (234)
T ss_pred EECCcHHH
Confidence 99999974
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.01 Score=65.05 Aligned_cols=47 Identities=26% Similarity=0.240 Sum_probs=28.5
Q ss_pred CCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEecccccce
Q 011679 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHVHAYE 359 (479)
Q Consensus 307 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 359 (479)
..+.-+|+++|..+-..... ...+. .... +++ -+||++|+||+|..-
T Consensus 243 ~GaDvIIaLsH~G~~~d~~~---~~~en--a~~~-l~~v~gID~IlgGHsH~~~ 290 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGYN---VGMEN--ASYY-LTEVPGVDAVLMGHSHTEV 290 (780)
T ss_pred cCCCEEEEEeccCccccccc---ccchh--hhHH-HhcCCCCCEEEECCCCCcc
Confidence 56788999999876432111 11111 1111 234 489999999999864
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00095 Score=62.31 Aligned_cols=70 Identities=23% Similarity=0.417 Sum_probs=45.5
Q ss_pred eEEEEEecCCCCCCc--------------HHHHHHHHH----hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh
Q 011679 160 YKFGIIGDLGQTYNS--------------LSTLEHYME----SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA 221 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~--------------~~~l~~i~~----~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 221 (479)
-+.++++|+|.+... .+.++.+.+ .+||.+|++||+...... ...|+.+.+.++.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~-----~~~~~~~~~~l~~~- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKK-----GLEWRFIREFIEVT- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCC-----hHHHHHHHHHHHhc-
Confidence 457899999987421 123444433 389999999999964332 12234444455543
Q ss_pred ccCCeEEcCCCcccc
Q 011679 222 AYQPWIWSAGNHEIE 236 (479)
Q Consensus 222 ~~~P~~~v~GNHD~~ 236 (479)
..+++.+.||||..
T Consensus 89 -~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 89 -FRDLILIRGNHDAL 102 (225)
T ss_pred -CCcEEEECCCCCCc
Confidence 35899999999963
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0029 Score=73.26 Aligned_cols=48 Identities=19% Similarity=0.248 Sum_probs=30.7
Q ss_pred CCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEecccccce
Q 011679 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHVHAYE 359 (479)
Q Consensus 307 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 359 (479)
..+.-+|++.|...-...... ..+ ....++.++ .+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~--~~e---n~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSS--GAE---DSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCC--Ccc---hHHHHHHHhCCCCcEEEeCCCcccc
Confidence 568889999998875432111 111 122334434 589999999999864
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00061 Score=62.96 Aligned_cols=64 Identities=20% Similarity=0.166 Sum_probs=40.1
Q ss_pred EEEEEecCCCCCCcHHH-HHHHHH-hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 161 KFGIIGDLGQTYNSLST-LEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~~-l~~i~~-~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
|++++||+|........ ++.+.. .++|.++++||+++..... .+.++.+.. .+++++.||||..
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~-----------~~~~~~l~~-~~~~~v~GNhe~~ 67 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPES-----------LACLELLLE-PWFHAVRGNHEQM 67 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH-----------HHHHHHHhc-CCEEEeECCChHH
Confidence 68999999976432222 222211 2589999999999643211 123333322 4689999999974
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.00072 Score=64.17 Aligned_cols=69 Identities=22% Similarity=0.278 Sum_probs=41.8
Q ss_pred eEEEEEecCCCCCCcHHH-HHHHHH---------hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEc
Q 011679 160 YKFGIIGDLGQTYNSLST-LEHYME---------SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWS 229 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~-l~~i~~---------~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v 229 (479)
+|+.++||+|........ ++.+.- .+-|.++++||++...... ....+.+..+.....++++
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S--------~~vl~~~~~~~~~~~~~~l 72 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHS--------LRMIEIVWELVEKKAAYYV 72 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcCh--------HHHHHHHHHHhhCCCEEEE
Confidence 478999999986543322 222210 0236899999999753221 1222333333344579999
Q ss_pred CCCcccc
Q 011679 230 AGNHEIE 236 (479)
Q Consensus 230 ~GNHD~~ 236 (479)
.||||..
T Consensus 73 ~GNHE~~ 79 (245)
T PRK13625 73 PGNHCNK 79 (245)
T ss_pred eCccHHH
Confidence 9999964
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0011 Score=62.89 Aligned_cols=74 Identities=15% Similarity=0.183 Sum_probs=45.6
Q ss_pred EEEecCCCCCCc--HHHHHHHH----Hh-----CCCEEEEcCcccccCccccc--------ccchhhhHHHHHHHhhhcc
Q 011679 163 GIIGDLGQTYNS--LSTLEHYM----ES-----GAQTVLFLGDLSYADRYQFI--------DVGVRWDSWGRFVERSAAY 223 (479)
Q Consensus 163 ~~~gD~~~~~~~--~~~l~~i~----~~-----~pd~vl~~GD~~y~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 223 (479)
+++||+|.+... ...++.+. .. ++|.||++||++........ .....+..+.+.++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 689999976532 12222222 22 46999999999964211000 0011234455667777777
Q ss_pred CCeEEcCCCcccc
Q 011679 224 QPWIWSAGNHEIE 236 (479)
Q Consensus 224 ~P~~~v~GNHD~~ 236 (479)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999985
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0075 Score=65.03 Aligned_cols=46 Identities=22% Similarity=0.314 Sum_probs=28.2
Q ss_pred CCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEecccccc
Q 011679 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHVHAY 358 (479)
Q Consensus 307 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y 358 (479)
..+.-+|++.|.......... ..+... ..+++ -+||++|+||+|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~--~~en~~----~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQP--GAENSA----YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCcccc--ccchHH----HHHhcCCCCCEEEcCCCCcc
Confidence 467889999998764321111 111111 11333 58999999999985
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.014 Score=49.73 Aligned_cols=65 Identities=23% Similarity=0.231 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCCc---------H-----HHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccC
Q 011679 161 KFGIIGDLGQTYNS---------L-----STLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ 224 (479)
Q Consensus 161 ~f~~~gD~~~~~~~---------~-----~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (479)
.+.++||+|.+... . ..+....+. .-|.+.|+||++.... +-..+...++.+...
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n--------~~~~a~~IlerLnGr- 75 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGAN--------RERAAGLILERLNGR- 75 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccc--------hhhHHHHHHHHcCCc-
Confidence 46788999986421 1 123333343 4478999999996432 114456667766443
Q ss_pred CeEEcCCCccc
Q 011679 225 PWIWSAGNHEI 235 (479)
Q Consensus 225 P~~~v~GNHD~ 235 (479)
...++||||-
T Consensus 76 -khlv~GNhDk 85 (186)
T COG4186 76 -KHLVPGNHDK 85 (186)
T ss_pred -EEEeeCCCCC
Confidence 4889999996
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.019 Score=54.27 Aligned_cols=62 Identities=16% Similarity=0.197 Sum_probs=38.0
Q ss_pred HHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeee
Q 011679 295 EWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSY 362 (479)
Q Consensus 295 ~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~ 362 (479)
+-+++.+++.+ .+++.+|+..|-..-... ........+...+...++|+|+.||.|..+-..
T Consensus 162 ~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~E 223 (239)
T cd07381 162 ERIAADIAEAK-KKADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHVLQGIE 223 (239)
T ss_pred HHHHHHHHHHh-hcCCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCeE
Confidence 34555555543 237899999996442111 111223344455556799999999999986554
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0014 Score=61.28 Aligned_cols=67 Identities=24% Similarity=0.269 Sum_probs=41.3
Q ss_pred EEEEecCCCCCCcHHH-HHHHHHh--------CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCC
Q 011679 162 FGIIGDLGQTYNSLST-LEHYMES--------GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232 (479)
Q Consensus 162 f~~~gD~~~~~~~~~~-l~~i~~~--------~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GN 232 (479)
+.++||+|........ ++.+... ..|.+|++||++.....+ ....+.+..+.....++++.||
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S--------~~vl~~l~~l~~~~~~~~l~GN 72 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEI--------RELLEIVKSMVDAGHALAVMGN 72 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCH--------HHHHHHHHHhhcCCCEEEEEcc
Confidence 3689999987654332 3333211 357999999999653321 2233344444333468999999
Q ss_pred cccc
Q 011679 233 HEIE 236 (479)
Q Consensus 233 HD~~ 236 (479)
||..
T Consensus 73 HE~~ 76 (222)
T cd07413 73 HEFN 76 (222)
T ss_pred CcHH
Confidence 9974
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0015 Score=60.83 Aligned_cols=65 Identities=18% Similarity=0.201 Sum_probs=41.1
Q ss_pred eEEEEEecCCCCCCcHHH-HHHHH-HhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNSLST-LEHYM-ESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~-l~~i~-~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
-|++++||+|........ ++.+. ..+.|.++++||++.....+ . +.++.+.. ..++++.||||..
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~--------~---~~l~~l~~-~~~~~v~GNHE~~ 81 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPES--------L---NVLRLLNQ-PWFISVKGNHEAM 81 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCH--------H---HHHHHHhh-CCcEEEECchHHH
Confidence 389999999987544333 23332 12689999999999753321 1 12222222 2578999999974
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.019 Score=62.17 Aligned_cols=46 Identities=17% Similarity=0.240 Sum_probs=27.9
Q ss_pred CCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEecccccc
Q 011679 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHVHAY 358 (479)
Q Consensus 307 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y 358 (479)
..+.-+|++.|..+-........ +. .... +.+ -+||++|.||.|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~~a--en---~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKAMA--EN---SVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCccccc--cc---hhHH-HhcCCCCCEEEeCCCCcc
Confidence 56888999999876432111101 11 1111 233 57999999999985
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.021 Score=54.13 Aligned_cols=176 Identities=13% Similarity=0.152 Sum_probs=92.5
Q ss_pred EEEEecCCCCCCcH--HHHHHHHH---------------hCCCEEEEcCcccccCccccc--------------ccchhh
Q 011679 162 FGIIGDLGQTYNSL--STLEHYME---------------SGAQTVLFLGDLSYADRYQFI--------------DVGVRW 210 (479)
Q Consensus 162 f~~~gD~~~~~~~~--~~l~~i~~---------------~~pd~vl~~GD~~y~~~~~~~--------------~~~~~~ 210 (479)
++++||+|.+.... ..++.+.+ .+..-+|++||.+...+.... +.....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 68899998876532 12222211 134579999999975432110 112334
Q ss_pred hHHHHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCC----CCCCCCcEEEEEeCCEEEEEEcCCC-
Q 011679 211 DSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLA----SKSSSPLWYAIRRASAHIIVLSSYS- 285 (479)
Q Consensus 211 ~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~----~~~~~~~yysf~~g~~~fi~Ldt~~- 285 (479)
+.+..++..+...+|+...|||||-......+ .++. ...| |... -....|. |.|++++++|++.....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQ--qplh--~~lf--p~s~~~~~~~~vtNP-~~~~i~g~~vLgtsGqni 154 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHSLPQ--QPLH--RCLF--PKSSNYSTLNLVTNP-YEFSIDGVRVLGTSGQNV 154 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccccCCC--CCCC--HHHh--hcccccCCcEEeCCC-eEEEECCEEEEEECCCCH
Confidence 55667788888899999999999985321111 1110 0011 1100 0111222 46889999999876532
Q ss_pred ----CCCCChHHHHHHHHHHhhcc-CCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEeccccccee
Q 011679 286 ----PFVKYTPQWEWLREELKKVD-REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYER 360 (479)
Q Consensus 286 ----~~~~~~~Q~~WL~~~L~~~~-~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 360 (479)
.+.....-++.|+..|+--. ...++=.+ |.|... +. .+++-+.-.+++++||.|.|+-
T Consensus 155 ~Di~ky~~~~~~l~~me~~L~wrHlaPTaPDTL-----~~yP~~-----~~-------Dpfvi~~~PhVyf~Gnq~~f~t 217 (257)
T cd07387 155 DDILKYSSLESRLDILERTLKWRHIAPTAPDTL-----WCYPFT-----DR-------DPFILEECPHVYFAGNQPKFGT 217 (257)
T ss_pred HHHHHhCCCCCHHHHHHHHHHhcccCCCCCCcc-----ccccCC-----CC-------CceeecCCCCEEEeCCCcceee
Confidence 12233444667777776410 01111000 111100 00 1222234589999999999876
Q ss_pred e
Q 011679 361 S 361 (479)
Q Consensus 361 ~ 361 (479)
.
T Consensus 218 ~ 218 (257)
T cd07387 218 K 218 (257)
T ss_pred e
Confidence 4
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.003 Score=56.20 Aligned_cols=41 Identities=24% Similarity=0.294 Sum_probs=27.9
Q ss_pred CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 185 GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 185 ~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
++|.|+++||++..... ..+.+.++.+ ..|++.++||||..
T Consensus 42 ~~d~vi~~GDl~~~~~~---------~~~~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 42 PDDTVYHLGDFSFGGKA---------GTELELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred CCCEEEEeCCCCCCCCh---------HHHHHHHHhC--CCCeEEEeCCCCch
Confidence 78999999999964321 1112333332 35899999999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0032 Score=60.38 Aligned_cols=68 Identities=18% Similarity=0.248 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCcHHH-HHHHHHh------CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccC---CeEEcC
Q 011679 161 KFGIIGDLGQTYNSLST-LEHYMES------GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ---PWIWSA 230 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~~-l~~i~~~------~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~---P~~~v~ 230 (479)
++.++||+|........ ++.+.+. ..+.+|++||++...... ....+++..+.... .++++.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS--------~eVld~L~~l~~~~~~~~vv~Lr 74 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPET--------RKVIDFLISLPEKHPKQRHVFLC 74 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCH--------HHHHHHHHHhhhcccccceEEEe
Confidence 68999999988654433 3444332 256899999999753221 22333343333322 478999
Q ss_pred CCcccc
Q 011679 231 GNHEIE 236 (479)
Q Consensus 231 GNHD~~ 236 (479)
||||..
T Consensus 75 GNHE~~ 80 (304)
T cd07421 75 GNHDFA 80 (304)
T ss_pred cCChHH
Confidence 999964
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0023 Score=59.67 Aligned_cols=65 Identities=20% Similarity=0.177 Sum_probs=41.4
Q ss_pred eEEEEEecCCCCCCcHH-HHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNSLS-TLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~-~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
-|++++||+|....... .++.+... +.|-++++||++.....+ . +.++.+.. ..++++.||||..
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s--------~---~vl~~l~~-~~~~~v~GNHE~~ 83 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQS--------L---RCLQLLEE-HWVRAVRGNHEQM 83 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCH--------H---HHHHHHHc-CCceEeeCchHHH
Confidence 38999999998765433 33443222 578999999999653321 1 22332222 3467899999974
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.038 Score=52.18 Aligned_cols=60 Identities=17% Similarity=0.217 Sum_probs=37.0
Q ss_pred HHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeee
Q 011679 297 LREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSY 362 (479)
Q Consensus 297 L~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~ 362 (479)
+++.+++++ .++..+|++.|-..-... ........+...+.+.++|+|+.||.|..+...
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~-----~p~~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQY-----EPTDEQRELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCC-----CCCHHHHHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 444444443 357899999997652211 111122334444445789999999999987654
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0033 Score=59.81 Aligned_cols=64 Identities=25% Similarity=0.296 Sum_probs=40.4
Q ss_pred EEEecCCCCCCcHHH-HHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 163 GIIGDLGQTYNSLST-LEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 163 ~~~gD~~~~~~~~~~-l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
.++||+|........ ++.+... +.|.++++||++.....+ .+..+.+..+. ..++.+.||||..
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s--------~evl~~l~~l~--~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDS--------LETLRFVKSLG--DSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCH--------HHHHHHHHhcC--CCeEEEcCCchHH
Confidence 579999987544333 3333222 579999999999753221 22333333332 3688999999985
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0069 Score=56.03 Aligned_cols=74 Identities=23% Similarity=0.292 Sum_probs=48.0
Q ss_pred CeEEEEEecCCCCCCc-----------------HHHHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhh
Q 011679 159 SYKFGIIGDLGQTYNS-----------------LSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS 220 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~-----------------~~~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~ 220 (479)
.-+.++++|.|.+... ...++.+.+. +|+-+|++||+--+-+... ...|+....+++.+
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~---~~e~~~~~~f~~~~ 95 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSL---RQEKEEVREFLELL 95 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccc---cccHHHHHHHHHHh
Confidence 3467999999987531 1123333333 9999999999986544321 23444444555554
Q ss_pred hccCCeEEcCCCcccc
Q 011679 221 AAYQPWIWSAGNHEIE 236 (479)
Q Consensus 221 ~~~~P~~~v~GNHD~~ 236 (479)
... -|+++.||||-.
T Consensus 96 ~~~-evi~i~GNHD~~ 110 (235)
T COG1407 96 DER-EVIIIRGNHDNG 110 (235)
T ss_pred ccC-cEEEEeccCCCc
Confidence 433 599999999975
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0061 Score=56.90 Aligned_cols=65 Identities=23% Similarity=0.194 Sum_probs=38.9
Q ss_pred EEecCCCCCCcHHH-HHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-cCCeEEcCCCcccc
Q 011679 164 IIGDLGQTYNSLST-LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQPWIWSAGNHEIE 236 (479)
Q Consensus 164 ~~gD~~~~~~~~~~-l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~v~GNHD~~ 236 (479)
++||+|........ ++.+.....|.+|++||++...... ......+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~--------~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDS--------VEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCc--------HHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 68999976432221 2222223789999999999653211 122222333221 34799999999985
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0082 Score=57.41 Aligned_cols=67 Identities=27% Similarity=0.325 Sum_probs=41.9
Q ss_pred eEEEEEecCCCCCCcHHH-HHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNSLST-LEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~-l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
++..++||+|........ ++.+.-. ..|-++++||++.....+ ....+.+..+. ..+..+.||||..
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~s--------levL~~l~~l~--~~~~~VlGNHD~~ 69 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGS--------LEVLRYVKSLG--DAVRLVLGNHDLH 69 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCH--------HHHHHHHHhcC--CCeEEEEChhHHH
Confidence 357899999987654433 3444312 568999999999754321 12233333332 2356899999974
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.04 Score=42.15 Aligned_cols=70 Identities=19% Similarity=0.347 Sum_probs=44.0
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
+|..+++..-. .+++.|.|....... .-.|+|....+... ...... . .-...+.|+||+|+|.|
T Consensus 2 ~P~~l~v~~~~--~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~----~~~~~~-----~-~~~~~~~i~~L~p~t~Y 69 (85)
T PF00041_consen 2 APENLSVSNIS--PTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD----WQEVTV-----P-GNETSYTITGLQPGTTY 69 (85)
T ss_dssp SSEEEEEEEEC--SSEEEEEEEESSSTSSSESEEEEEEEETTSSSE----EEEEEE-----E-TTSSEEEEESCCTTSEE
T ss_pred cCcCeEEEECC--CCEEEEEEECCCCCCCCeeEEEEEEEeccccee----eeeeee-----e-eeeeeeeeccCCCCCEE
Confidence 47777777653 589999999984222 23577765554330 011111 1 11226788999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
.+||..
T Consensus 70 ~~~v~a 75 (85)
T PF00041_consen 70 EFRVRA 75 (85)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.19 Score=47.73 Aligned_cols=65 Identities=15% Similarity=0.226 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeee
Q 011679 293 QWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYR 363 (479)
Q Consensus 293 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~ 363 (479)
+.+.+++++++++ ..++++||..|.-.-. .. ...+ ....+...+.+.++|+|+.+|.|..|-..-
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~---~~-~p~~-~q~~~a~~lidaGaDiIiG~HpHv~q~~E~ 233 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEY---EN-YPTP-EQRELARALIDAGADIIIGHHPHVIQPVEI 233 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCC---CC-CCCH-HHHHHHHHHHHcCCCEEEeCCCCcccceEE
Confidence 4578888888875 5688999999974211 11 1122 333455555568999999999999887663
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.025 Score=57.62 Aligned_cols=45 Identities=20% Similarity=0.321 Sum_probs=33.8
Q ss_pred CCCeEEEEEecCCCCCC---------cHHHHHHHH---H-hCCCEEEEcCcccccCcc
Q 011679 157 DASYKFGIIGDLGQTYN---------SLSTLEHYM---E-SGAQTVLFLGDLSYADRY 201 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~---------~~~~l~~i~---~-~~pd~vl~~GD~~y~~~~ 201 (479)
...+||++.+|.|.++. ++.+++.|. + ++.|+||..||++-++..
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkP 68 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKP 68 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCc
Confidence 46899999999998763 344554443 3 399999999999987543
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.23 Score=46.51 Aligned_cols=191 Identities=20% Similarity=0.234 Sum_probs=86.7
Q ss_pred EEEecCCCCCCc---HHHHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccccc
Q 011679 163 GIIGDLGQTYNS---LSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYM 238 (479)
Q Consensus 163 ~~~gD~~~~~~~---~~~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~ 238 (479)
+++||.=...+. ...+..+.+. ++||||..|.++-. |.... .+.+.++++ ..+- ..+.|||=+...
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~-G~Git-----~~~~~~L~~---~GvD-viT~GNH~wdkk 70 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAAG-GFGIT-----PKIAEELFK---AGVD-VITMGNHIWDKK 70 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTT-TSS-------HHHHHHHHH---HT-S-EEE--TTTTSST
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCC-CCCCC-----HHHHHHHHh---cCCC-EEecCcccccCc
Confidence 357776443321 2233444444 89999999999953 32211 123333332 2333 458999988631
Q ss_pred cCCCccccccccccccccCcCCCC-CCCCcEEEEEeCCEEEEEEcCCCCC--CCChHHHHHHHHHHhhccCCCCCeEEEE
Q 011679 239 TYMGEVVPFKSYLHRYPTPHLASK-SSSPLWYAIRRASAHIIVLSSYSPF--VKYTPQWEWLREELKKVDREKTPWLIVL 315 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~yysf~~g~~~fi~Ldt~~~~--~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 315 (479)
+...+-.-..+.--|.|.+. ..+..|..++.++..+-+++-.... .....-+..+++.|++. +.+.+.+||=
T Consensus 71 ----ei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVD 145 (253)
T PF13277_consen 71 ----EIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVD 145 (253)
T ss_dssp ----THHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEE
T ss_pred ----HHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEE
Confidence 10000000111112333222 2345688899998887777753211 11112333444444443 2467789999
Q ss_pred eccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEE-eCCCC
Q 011679 316 MHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYIT-VGDGG 394 (479)
Q Consensus 316 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~-~G~gG 394 (479)
+|.= ......+ .-.+-.-+|.+|+.=|+|....-.++ -++|+.||+ +|.-|
T Consensus 146 FHAE-----------aTSEK~A-~g~~lDGrvsaV~GTHTHVqTaDerI----------------Lp~GTaYiTDvGMtG 197 (253)
T PF13277_consen 146 FHAE-----------ATSEKQA-MGWYLDGRVSAVVGTHTHVQTADERI----------------LPGGTAYITDVGMTG 197 (253)
T ss_dssp EE-S------------HHHHHH-HHHHHBTTBSEEEEESSSS-BS--EE-----------------TTS-EEES---EBE
T ss_pred eecC-----------cHHHHHH-HHHHhCCcEEEEEeCCCCccCchhhc----------------cCCCCEEEecCcccc
Confidence 9852 2222222 23455678999999999985433322 247888987 55555
Q ss_pred CC
Q 011679 395 NQ 396 (479)
Q Consensus 395 ~~ 396 (479)
..
T Consensus 198 ~~ 199 (253)
T PF13277_consen 198 PY 199 (253)
T ss_dssp ES
T ss_pred Cc
Confidence 44
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.18 Score=42.74 Aligned_cols=85 Identities=15% Similarity=0.246 Sum_probs=53.1
Q ss_pred HHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeec
Q 011679 337 AFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREA 416 (479)
Q Consensus 337 ~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~ 416 (479)
.|.-+-++.+||+.++||+|.++...- +|-.||--|++-.... .. .....
T Consensus 98 sL~~LaRqldvDILl~G~Th~f~Aye~-------------------eg~ffvnPGSaTGAfn----~~-------~t~~~ 147 (183)
T KOG3325|consen 98 SLALLARQLDVDILLTGHTHKFEAYEH-------------------EGKFFVNPGSATGAFN----VS-------DTDII 147 (183)
T ss_pred HHHHHHHhcCCcEEEeCCceeEEEEEe-------------------CCcEEeCCCcccCCCc----cc-------ccCCC
Confidence 344455678999999999999988762 4456776665422211 01 11113
Q ss_pred cccEEEEEEecccEEEEEEEEcCCCceeeeeeEEEEe
Q 011679 417 SYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 453 (479)
Q Consensus 417 ~~Gf~~l~v~~~t~~~~~~~~~~~g~~~~~D~f~i~~ 453 (479)
...|..|+|...+...+-|.- -||++ .+|.+...|
T Consensus 148 ~PSFvLmDiqg~~~v~YvY~l-idgeV-kVdki~ykK 182 (183)
T KOG3325|consen 148 VPSFVLMDIQGSTVVTYVYRL-IDGEV-KVDKIEYKK 182 (183)
T ss_pred CCceEEEEecCCEEEEEEeee-eCCcE-EEEEEEecC
Confidence 567999999877766555533 46776 467766543
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.043 Score=53.86 Aligned_cols=65 Identities=18% Similarity=0.142 Sum_probs=38.7
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh-----CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhcc--CCeEEcCCCc
Q 011679 161 KFGIIGDLGQTYNSLSTLEHYMES-----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY--QPWIWSAGNH 233 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~~l~~i~~~-----~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~~~v~GNH 233 (479)
++.++||+|..... +..+.+. ..+.+|++||++....... +. ...+-.+... --++.+.|||
T Consensus 52 ~~~vvGDiHG~~~d---L~~il~~~g~~~~~~~~lFLGDyVDRG~~s~-------Ev-l~ll~~lk~~~p~~v~llRGNH 120 (321)
T cd07420 52 QVTICGDLHGKLDD---LFLIFYKNGLPSPENPYVFNGDFVDRGKRSI-------EI-LIILFAFFLVYPNEVHLNRGNH 120 (321)
T ss_pred CeEEEEeCCCCHHH---HHHHHHHcCCCCccceEEEeccccCCCCCcH-------HH-HHHHHHHhhcCCCcEEEecCch
Confidence 68999999987543 2233322 2267999999997543211 22 2222222212 2488899999
Q ss_pred ccc
Q 011679 234 EIE 236 (479)
Q Consensus 234 D~~ 236 (479)
|..
T Consensus 121 E~~ 123 (321)
T cd07420 121 EDH 123 (321)
T ss_pred hhh
Confidence 985
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.023 Score=53.23 Aligned_cols=176 Identities=15% Similarity=0.158 Sum_probs=94.9
Q ss_pred CCEEEEcCcccccCccccccc--chhhhHHHH----HHHhhhccCCeEEcCCCcccccccCC-------Ccccccc-cc-
Q 011679 186 AQTVLFLGDLSYADRYQFIDV--GVRWDSWGR----FVERSAAYQPWIWSAGNHEIEYMTYM-------GEVVPFK-SY- 250 (479)
Q Consensus 186 pd~vl~~GD~~y~~~~~~~~~--~~~~~~~~~----~~~~~~~~~P~~~v~GNHD~~~~~~~-------~~~~~~~-~~- 250 (479)
|--++..||++...+....++ ..++..+.. ...+.+-.+|+|.-.||||..-+.-. .+.+.|. .|
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~H 206 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYH 206 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhc
Confidence 445677789998766543321 112222221 11223446899999999998632100 0111110 00
Q ss_pred --ccccccCcCC-CCCCCCcEEEEEeCCEEEEEEcCCCCC-CCC-hHHHHHHHHHHhhccCCCCCeEEEEeccccccCCC
Q 011679 251 --LHRYPTPHLA-SKSSSPLWYAIRRASAHIIVLSSYSPF-VKY-TPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNE 325 (479)
Q Consensus 251 --~~~~~~p~~~-~~~~~~~yysf~~g~~~fi~Ldt~~~~-~~~-~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~ 325 (479)
-..|..|... .......-||+++|+++.+-+-....- ..+ ..-+-||+.+|.... +..+-++++.|.-+-....
T Consensus 207 r~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~a-adgrpv~LfqhyGwdtfst 285 (392)
T COG5555 207 RSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSA-ADGRPVYLFQHYGWDTFST 285 (392)
T ss_pred CcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeec-cCCCceeehhhhCccceec
Confidence 0112222111 112233468899999988876553210 111 234679999998754 2333488888875532111
Q ss_pred Ccc----------Cc------CHHHHHHHHHHHHHcCccEEEecccccceeee
Q 011679 326 AHF----------ME------GESMRAAFESWFVRYKVDVVFAGHVHAYERSY 362 (479)
Q Consensus 326 ~~~----------~~------~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~ 362 (479)
..| .+ ....+..|...++-|+|.-.+.||-|.+.-.+
T Consensus 286 eawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~may 338 (392)
T COG5555 286 EAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMAY 338 (392)
T ss_pred cccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccceee
Confidence 111 00 12346778888889999999999999874444
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.049 Score=53.30 Aligned_cols=68 Identities=19% Similarity=0.204 Sum_probs=39.2
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccC--CeEEcCCCcccc
Q 011679 161 KFGIIGDLGQTYNSLS-TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ--PWIWSAGNHEIE 236 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~-~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~~v~GNHD~~ 236 (479)
+++++||+|....... .+........+-++++||++...... -+....+..+.-.. -++.+.||||..
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s--------~Evi~lL~~lki~~p~~v~lLRGNHE~~ 114 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFS--------IECVLYLWALKILYPKTLFLLRGNHECR 114 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCCh--------HHHHHHHHHHHhhcCCCEEEEeCCCcHH
Confidence 5899999998754322 22211111347899999999653221 11122222232223 478999999985
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.072 Score=51.27 Aligned_cols=69 Identities=16% Similarity=0.163 Sum_probs=40.3
Q ss_pred eEEEEEecCCCCCCcHH-HHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc--cCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNSLS-TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA--YQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~-~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~v~GNHD~~ 236 (479)
.+++++||+|....... .++.+.....+-++++||++..+... .+....+..+.- ..-++.+.||||..
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s--------~e~l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFS--------IEVILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCCh--------HHHHHHHHHHHhcCCCCEEEEeccccHH
Confidence 35899999997754322 22222222567899999999643221 111122222221 23588999999985
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.24 Score=53.18 Aligned_cols=73 Identities=22% Similarity=0.438 Sum_probs=47.9
Q ss_pred CCCcEEEEEEcCCCCCCCEEEEe----ecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC------
Q 011679 70 DGKAVIISWVTPHEPGPSTVSYG----TSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------ 139 (479)
Q Consensus 70 ~~~~~~v~W~t~~~~~~~~v~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~------ 139 (479)
..++++++|...+.+......|. .+.... ..|.. -..-..+++|+||+|+|.|-+||..
T Consensus 455 ~~~sitlsW~~p~~png~ildYEvky~ek~~~e--------~~~~~---~~t~~~~~ti~gL~p~t~YvfqVRarT~aG~ 523 (996)
T KOG0196|consen 455 TSDSITLSWSEPDQPNGVILDYEVKYYEKDEDE--------RSYST---LKTKTTTATITGLKPGTVYVFQVRARTAAGY 523 (996)
T ss_pred ccCceEEecCCCCCCCCcceeEEEEEeeccccc--------cceeE---EecccceEEeeccCCCcEEEEEEEEecccCC
Confidence 45899999999877665544443 332110 11100 0112346889999999999999953
Q ss_pred CCCceeEEEECCCC
Q 011679 140 GDSSREFWFQTPPK 153 (479)
Q Consensus 140 ~~~s~~~~f~T~p~ 153 (479)
|..|....|.|.|.
T Consensus 524 G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 524 GPYSGKHEFQTLPS 537 (996)
T ss_pred CCCCCceeeeecCc
Confidence 45688999999875
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.087 Score=51.00 Aligned_cols=68 Identities=19% Similarity=0.162 Sum_probs=38.7
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc--cCCeEEcCCCcccc
Q 011679 161 KFGIIGDLGQTYNSLS-TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA--YQPWIWSAGNHEIE 236 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~-~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~v~GNHD~~ 236 (479)
.+.++||+|....... .+........+-+|++||++..+... -+....+..+.- ...++.+.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s--------~evl~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYS--------VETFLLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCH--------HHHHHHHHHHhhcCCCcEEEEecccchH
Confidence 4889999998654322 22221111446789999999653211 111122222222 23589999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.11 Score=51.91 Aligned_cols=65 Identities=15% Similarity=0.145 Sum_probs=38.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh----CC-CEEEEcCcccccCcccccccchhhhHHHHHHHhhhc--cCCeEEcCCCc
Q 011679 161 KFGIIGDLGQTYNSLSTLEHYMES----GA-QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA--YQPWIWSAGNH 233 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~~l~~i~~~----~p-d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~v~GNH 233 (479)
++.++||+|..... +..+.+. .. +.+|++||++..+... -+....+..+.- ..-++.+.|||
T Consensus 67 ~i~VvGDIHG~~~d---L~~ll~~~g~~~~~~~ylFLGDyVDRGp~S--------lEvl~lL~~lki~~p~~v~lLRGNH 135 (377)
T cd07418 67 EVVVVGDVHGQLHD---VLFLLEDAGFPDQNRFYVFNGDYVDRGAWG--------LETFLLLLSWKVLLPDRVYLLRGNH 135 (377)
T ss_pred CEEEEEecCCCHHH---HHHHHHHhCCCCCCceEEEeccccCCCCCh--------HHHHHHHHHHhhccCCeEEEEeeec
Confidence 68999999987543 2223322 22 4589999999643221 111222222222 23488999999
Q ss_pred ccc
Q 011679 234 EIE 236 (479)
Q Consensus 234 D~~ 236 (479)
|..
T Consensus 136 E~~ 138 (377)
T cd07418 136 ESK 138 (377)
T ss_pred ccc
Confidence 985
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.11 Score=50.63 Aligned_cols=68 Identities=22% Similarity=0.268 Sum_probs=38.6
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhcc--CCeEEcCCCcccc
Q 011679 161 KFGIIGDLGQTYNSLS-TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY--QPWIWSAGNHEIE 236 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~-~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~~~v~GNHD~~ 236 (479)
.++++||+|....... .++.......+-+|++||++..+.... +.+ ..+..+.-. ..++.+.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~-------e~i-~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL-------ETI-CLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcH-------HHH-HHHHHhhhhCCCcEEEEecccchh
Confidence 4899999998653322 222221124567889999996532211 111 222222212 2488999999985
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.53 Score=49.05 Aligned_cols=58 Identities=21% Similarity=0.341 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHc-CccE-EEecccccce
Q 011679 291 TPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVDV-VFAGHVHAYE 359 (479)
Q Consensus 291 ~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~Vdl-vlsGH~H~y~ 359 (479)
-.|.+|-.+.++. .+.+-+|++.|.|.-.... .. ..+..+...+ ++++ ||-||.|...
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~e-----~~---~~~~~ir~~~p~t~IqviGGHshird 270 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDDE-----WK---SLHAEIRKVHPNTPIQVIGGHSHIRD 270 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccchh-----hh---hHHHHHhhhCCCCceEEECchhhhhh
Confidence 3578888888876 6677789999988742111 11 1233333333 5677 9999999743
|
|
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.13 Score=50.10 Aligned_cols=68 Identities=15% Similarity=0.158 Sum_probs=38.4
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccC--CeEEcCCCcccc
Q 011679 161 KFGIIGDLGQTYNSLS-TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ--PWIWSAGNHEIE 236 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~-~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~~v~GNHD~~ 236 (479)
.+.++||+|....... .++.+.....+-++++||++..+... -+....+-.+.-.. -++.+.||||..
T Consensus 44 ~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s--------~evl~ll~~lk~~~p~~v~llrGNHE~~ 114 (303)
T PTZ00239 44 PVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNS--------VETMEYLLCLKVKYPGNITLLRGNHESR 114 (303)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCH--------HHHHHHHHHhhhcCCCcEEEEecccchH
Confidence 3788999998654322 22221112456789999999753221 11112222222222 488999999975
|
|
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.12 E-value=3.1 Score=39.37 Aligned_cols=70 Identities=16% Similarity=0.142 Sum_probs=42.4
Q ss_pred CCCCeEEEEEecCCCCCCcHHHHHHHHHh-CCCEEEEcCcccccCcccccccchhh-hHHHHHHHhhhccCCeEEcCCCc
Q 011679 156 PDASYKFGIIGDLGQTYNSLSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRW-DSWGRFVERSAAYQPWIWSAGNH 233 (479)
Q Consensus 156 ~~~~~~f~~~gD~~~~~~~~~~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~~~v~GNH 233 (479)
...-.||+.++|.|..... +... +-|+++++||...-. ..+| ..+.+.+-.+. ..=-+++.|||
T Consensus 58 ~~~~~r~VcisdtH~~~~~------i~~~p~gDvlihagdfT~~g-------~~~ev~~fn~~~gslp-h~yKIVIaGNH 123 (305)
T KOG3947|consen 58 GPGYARFVCISDTHELTFD------INDIPDGDVLIHAGDFTNLG-------LPEEVIKFNEWLGSLP-HEYKIVIAGNH 123 (305)
T ss_pred CCCceEEEEecCcccccCc------cccCCCCceEEeccCCcccc-------CHHHHHhhhHHhccCc-ceeeEEEeecc
Confidence 3467899999999976432 2222 679999999999532 1222 22222222221 11247889999
Q ss_pred cccccc
Q 011679 234 EIEYMT 239 (479)
Q Consensus 234 D~~~~~ 239 (479)
|...+.
T Consensus 124 ELtFd~ 129 (305)
T KOG3947|consen 124 ELTFDH 129 (305)
T ss_pred ceeecc
Confidence 997653
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.32 Score=49.53 Aligned_cols=80 Identities=14% Similarity=0.243 Sum_probs=53.4
Q ss_pred CCCeEEEEEecCCCCCCcH--HHHHHHHHh---------CCCEEEEcCcccccCccccc--------ccchhhhHHHHHH
Q 011679 157 DASYKFGIIGDLGQTYNSL--STLEHYMES---------GAQTVLFLGDLSYADRYQFI--------DVGVRWDSWGRFV 217 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~~~--~~l~~i~~~---------~pd~vl~~GD~~y~~~~~~~--------~~~~~~~~~~~~~ 217 (479)
...+++++++|.|.+...+ ..+..+.+. +...++.+||.+..-+.... +.-.+++.+.+++
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 3578999999999875321 122222221 44789999999974433211 1234566667777
Q ss_pred HhhhccCCeEEcCCCcccc
Q 011679 218 ERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 218 ~~~~~~~P~~~v~GNHD~~ 236 (479)
..+...+-++..|||||..
T Consensus 303 ~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred hhCCCCceEEEecCCCCcc
Confidence 7777788899999999984
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.17 Score=49.62 Aligned_cols=68 Identities=22% Similarity=0.247 Sum_probs=38.1
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhcc--CCeEEcCCCcccc
Q 011679 161 KFGIIGDLGQTYNSLS-TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY--QPWIWSAGNHEIE 236 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~-~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~~~v~GNHD~~ 236 (479)
.++++||+|....... .++.......+-.|++||++..+... .+.+ ..+..+.-. ..++.+.||||..
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s-------~evl-~ll~~lki~~p~~v~llRGNHE~~ 130 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQS-------LETI-CLLLAYKIKYPENFFLLRGNHECA 130 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCc-------HHHH-HHHHHhcccCCCceEEEecccchh
Confidence 4899999997643222 22211111446788999999753221 1121 222222222 2488999999985
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.2 Score=49.23 Aligned_cols=23 Identities=4% Similarity=0.150 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 011679 335 RAAFESWFVRYKVDVVFAGHVHA 357 (479)
Q Consensus 335 ~~~l~~l~~~~~VdlvlsGH~H~ 357 (479)
.+.+...+++.+.++++-||.=.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 45778889999999999999865
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.3 Score=47.99 Aligned_cols=22 Identities=5% Similarity=0.196 Sum_probs=18.7
Q ss_pred HHHHHHHHHHcCccEEEecccc
Q 011679 335 RAAFESWFVRYKVDVVFAGHVH 356 (479)
Q Consensus 335 ~~~l~~l~~~~~VdlvlsGH~H 356 (479)
.+.+...+++++.++++=||.=
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe~ 263 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHEC 263 (311)
T ss_pred HHHHHHHHHHCCCeEEEEechh
Confidence 4577888999999999999973
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=91.47 E-value=0.2 Score=48.69 Aligned_cols=67 Identities=21% Similarity=0.210 Sum_probs=37.3
Q ss_pred EEEEecCCCCCCcHH-HHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhh--hccCCeEEcCCCcccc
Q 011679 162 FGIIGDLGQTYNSLS-TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS--AAYQPWIWSAGNHEIE 236 (479)
Q Consensus 162 f~~~gD~~~~~~~~~-~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~v~GNHD~~ 236 (479)
+.++||+|....... .++.+.....+-++++||++..+... .+.+ ..+-.+ .....++.+.||||..
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s-------~evl-~ll~~lk~~~p~~v~llrGNHE~~ 123 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHS-------VETI-TLQFCYKIVYPENFFLLRGNHECA 123 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCH-------HHHH-HHHHHHhhccCCeEEEEecccchH
Confidence 688999997654322 22222111344678999999653221 1111 111111 1233589999999975
|
|
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=89.94 E-value=2 Score=32.26 Aligned_cols=22 Identities=18% Similarity=0.363 Sum_probs=18.1
Q ss_pred eEEEEEeCCCCCCCEEEEEeCC
Q 011679 118 YIHQCLVDGLEYDTKYYYKIGS 139 (479)
Q Consensus 118 ~~~~v~l~gL~p~t~Y~Yrv~~ 139 (479)
-..++.+.+|.|++.|.+|+..
T Consensus 55 ~~~~~~i~~l~p~~~Y~~~v~a 76 (93)
T cd00063 55 SETSYTLTGLKPGTEYEFRVRA 76 (93)
T ss_pred cccEEEEccccCCCEEEEEEEE
Confidence 3456788999999999999853
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=89.16 E-value=3.1 Score=30.11 Aligned_cols=68 Identities=19% Similarity=0.316 Sum_probs=37.2
Q ss_pred EEEEeecCCCCcEEEEEEcCCCCC--CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC
Q 011679 62 VHITQGDYDGKAVIISWVTPHEPG--PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (479)
Q Consensus 62 v~l~~~~~~~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~ 139 (479)
+.+.... .+++.|+|....... .-.++|........ ....... .......+.+.+|+|++.|.+++..
T Consensus 7 ~~~~~~~--~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~i~~L~~~~~Y~v~v~a 76 (83)
T smart00060 7 LRVTDVT--STSVTLSWEPPPDDGITGYIVGYRVEYREEG--SSWKEVN------VTPSSTSYTLTGLKPGTEYEFRVRA 76 (83)
T ss_pred EEEEEEe--CCEEEEEECCCCCCCCCccEEEEEEEEecCC--CccEEEE------ecCCccEEEEeCcCCCCEEEEEEEE
Confidence 4555433 348999998553221 23555554332211 0001000 0111467889999999999999854
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >PF10518 TAT_signal: TAT (twin-arginine translocation) pathway signal sequence; InterPro: IPR019546 The twin-arginine translocation (Tat) pathway serves the role of transporting folded proteins across energy-transducing membranes [] | Back alignment and domain information |
|---|
Probab=87.13 E-value=0.77 Score=26.88 Aligned_cols=16 Identities=19% Similarity=0.100 Sum_probs=11.6
Q ss_pred hhhhhHHHHHHHHHHH
Q 011679 3 KMRLLLHLALTTAIVL 18 (479)
Q Consensus 3 ~~r~~l~~~~~~~~~~ 18 (479)
+||.||+.++++++++
T Consensus 3 sRR~fLk~~~a~~a~~ 18 (26)
T PF10518_consen 3 SRRQFLKGGAAAAAAA 18 (26)
T ss_pred cHHHHHHHHHHHHHHH
Confidence 7999999876655433
|
Homologues of the genes that encode the transport apparatus occur in archaea, bacteria, chloroplasts, and plant mitochondria []. In bacteria, the Tat pathway catalyses the export of proteins from the cytoplasm across the inner/cytoplasmic membrane. In chloroplasts, the Tat components are found in the thylakoid membrane and direct the import of proteins from the stroma. The Tat pathway acts separately from the general secretory (Sec) pathway, which transports proteins in an unfolded state []. It is generally accepted that the primary role of the Tat system is to translocate fully folded proteins across membranes. An example of proteins that need to be exported in their 3D conformation are redox proteins that have acquired complex multi-atom cofactors in the bacterial cytoplasm (or the chloroplast stroma or mitochondrial matrix). They include hydrogenases, formate dehydrogenases, nitrate reductases, trimethylamine N-oxide (TMAO) reductases and dimethyl sulphoxide (DMSO) reductases [, ]. The Tat system can also export whole heteroligomeric complexes in which some proteins have no Tat signal. This is the case of the DMSO reductase or formate dehydrogenase complexes. But there are also other cases where the physiological rationale for targeting a protein to the Tat signal is less obvious. Indeed, there are examples of homologous proteins that are in some cases targeted to the Tat pathway and in other cases to the Sec apparatus. Some examples are: copper nitrite reductases, flavin domains of flavocytochrome c and N-acetylmuramoyl-L-alanine amidases []. In halophilic archaea such as Halobacterium almost all secreted proteins appear to be Tat targeted. It has been proposed to be a response to the difficulties these organisms would otherwise face in successfully folding proteins extracellularly at high ionic strength []. The Tat signal peptide consists of three motifs: the positively charged N-terminal motif, the hydrophobic region and the C-terminal region that generally ends with a consensus short motif (A-x-A) specifying cleavage by signal peptidase. Sequence analysis revealed that signal peptides capable of targeting the Tat protein contain the consensus sequence [ST]-R-R-x-F-L-K. The nearly invariant twin-arginine gave rise to the pathway's name. In addition the h-region of Tat signal peptides is typically less hydrophobic than that of Sec-specific signal peptides [, ]. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=84.86 E-value=0.99 Score=41.46 Aligned_cols=77 Identities=12% Similarity=0.107 Sum_probs=41.9
Q ss_pred EEEEecCCCCCC--cHHHHHHHH-----HhCCCEEEEcCcccccCccccc------ccchhhh---HHHHHHHhhhccCC
Q 011679 162 FGIIGDLGQTYN--SLSTLEHYM-----ESGAQTVLFLGDLSYADRYQFI------DVGVRWD---SWGRFVERSAAYQP 225 (479)
Q Consensus 162 f~~~gD~~~~~~--~~~~l~~i~-----~~~pd~vl~~GD~~y~~~~~~~------~~~~~~~---~~~~~~~~~~~~~P 225 (479)
|++++|.+.... ..+.+..+. +.+|+.+|++|+++........ .+..... .+.+.+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 578899988743 244455544 3379999999999975332110 0011111 12233444556789
Q ss_pred eEEcCCCcccccc
Q 011679 226 WIWSAGNHEIEYM 238 (479)
Q Consensus 226 ~~~v~GNHD~~~~ 238 (479)
++.+||+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998643
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=80.16 E-value=4.2 Score=46.05 Aligned_cols=80 Identities=24% Similarity=0.399 Sum_probs=46.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC--C----EEEEeecCCCCc---eEEEeEEEEEeeecceeceEEEEEeCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP--S----TVSYGTSADKFD---FTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~--~----~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~l~gL~ 128 (479)
.|+.|.+... .++++.|.|........ . .++|+..+.... ..+.|. .+.| .+++|+
T Consensus 618 PP~Nl~lev~--sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n-----------~~~~--l~~~Le 682 (1381)
T KOG4221|consen 618 PPQNLSLEVV--SSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGN-----------TTQY--LFNGLE 682 (1381)
T ss_pred CCcceEEEec--CCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccc-----------hhhh--HhhcCC
Confidence 3565776653 46899999988743221 1 244443332211 122221 1222 357899
Q ss_pred CCCEEEEEeCC------CCCceeEEEECCC
Q 011679 129 YDTKYYYKIGS------GDSSREFWFQTPP 152 (479)
Q Consensus 129 p~t~Y~Yrv~~------~~~s~~~~f~T~p 152 (479)
|+|.|.+|+.. |..|+..++.|+-
T Consensus 683 p~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 683 PNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred CCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 99999999943 3457777887753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 479 | ||||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 1e-154 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-145 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-145 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-145 |
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 479 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-156 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-156 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 7e-33 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 1e-24 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 9e-11 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 1e-10 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 7e-10 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 6e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 7e-04 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 450 bits (1159), Expect = e-156
Identities = 258/424 (60%), Positives = 320/424 (75%), Gaps = 4/424 (0%)
Query: 38 WPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPH-EPGPSTVSYGTSAD 96
+D+P D++ FAVP G+N+PQQVHITQGDY+G+ VIISW TP+ + G + V Y +
Sbjct: 4 AEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENS 63
Query: 97 KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDP 156
K A GTV Y +Y Y S +IH C + LEYDTKYYY++G GD+ R+FWF TPPK P
Sbjct: 64 KSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGP 123
Query: 157 DASYKFGIIGDLGQTYNSLSTLEHYMESG--AQTVLFLGDLSYADRYQFIDVGVRWDSWG 214
D Y FG+IGD+GQT++S +TL HY ++ Q VLF+GDLSY++R+ D RWD+WG
Sbjct: 124 DVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHD-NNRWDTWG 182
Query: 215 RFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRA 274
RF ERS AYQPWIW+AGNHEI+Y +GE PF + +RYPTPH AS S PLWYAI+RA
Sbjct: 183 RFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRA 242
Query: 275 SAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESM 334
SAHIIVLSSYS FVKY+PQ++W EL+KV+R +TPWLIVL+H P+YNS EAH+MEGE+M
Sbjct: 243 SAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAM 302
Query: 335 RAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGG 394
RA FE +FV YKVD+VF+GHVH+YERS R+SN+ YNI + C PV D+SAPVYIT+GDGG
Sbjct: 303 RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGG 362
Query: 395 NQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQ 454
N EGLA + PQP YSAFREAS+GH +IKNRTHA + W+RN DG V DS L N+
Sbjct: 363 NSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNR 422
Query: 455 YWAS 458
YWAS
Sbjct: 423 YWAS 426
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 448 bits (1154), Expect = e-156
Identities = 245/417 (58%), Positives = 309/417 (74%), Gaps = 3/417 (0%)
Query: 42 DIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFT 101
D+PLD++ F VP G+N+PQQVHITQGD G+A+IISWVT EPG S V Y + +
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRI 61
Query: 102 AEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYK 161
A+G ++ Y F+ Y SG+IH + L+Y+TKYYY++G +++R F F TPP+ D Y
Sbjct: 62 AKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYT 121
Query: 162 FGIIGDLGQTYNSLSTLEHYMESG--AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER 219
FG+IGDLGQ+++S +TL HY S QTVLF+GDLSYADRY D VRWD+WGRF ER
Sbjct: 122 FGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRWDTWGRFTER 180
Query: 220 SAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHII 279
S AYQPWIW+AGNHEIE+ + E PFK + +RY P+ AS+S+SP WY+I+RASAHII
Sbjct: 181 SVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHII 240
Query: 280 VLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE 339
VLSSYS + + TPQ+ WL++EL+KV R +TPWLIVLMH P+YNS HFMEGE+MR FE
Sbjct: 241 VLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFE 300
Query: 340 SWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGL 399
+WFV+YKVDVVFAGHVHAYERS R+SN+ Y I++G C PV D+SAPVYIT+GD GN +
Sbjct: 301 AWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVI 360
Query: 400 AGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYW 456
PQP+YSAFREAS+GH +IKNRTHA + WNRN DG V DS N++W
Sbjct: 361 DSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHW 417
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 7e-33
Identities = 56/345 (16%), Positives = 97/345 (28%), Gaps = 69/345 (20%)
Query: 156 PDASYKFGIIGDLGQTYNSLSTLEHYM-----------ESGAQTVLFLGDLSYADRYQFI 204
P +F +GD G N+ M GA +L LGD Y
Sbjct: 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 62
Query: 205 DVGVRWDSW--GRFVERSAAYQPWIWSAGNHEIEY----MTYMGEVVPFKSYLHRYPTPH 258
R+ F + S PW AGNH+ ++ ++ Y
Sbjct: 63 K-DKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLR 121
Query: 259 LASKSSSPLWYAIRRASAHIIVLSSYSP---------FVKYTPQWEWLREELKKVDREKT 309
S+ + + S Q W++++L K
Sbjct: 122 FKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KE 178
Query: 310 PWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHY 369
+++V H P+++ E H + +KV GH H +
Sbjct: 179 DYVLVAGHYPVWSIAE-HGPTHC-LVKQLLPLLTTHKVTAYLCGHDHNLQYLQ------- 229
Query: 370 NISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAF----REASYGHSTLEI 425
D++ ++ G G + R Y F + G + +EI
Sbjct: 230 -----------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI 278
Query: 426 KNR--THAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKH 468
+ + + GK + L RR R ++H
Sbjct: 279 TPKEMSVTYI----EASGKSL--FKTKLP-------RRARSEHQH 310
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-24
Identities = 45/325 (13%), Positives = 88/325 (27%), Gaps = 69/325 (21%)
Query: 158 ASYKFGIIGDLG-----QTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDS 212
+F +GD G Q N+ + ++ G D W +
Sbjct: 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDP--AWKN 59
Query: 213 WGRFV---ERSAAYQPWIWSAGNHEIEYM--------------TYMGEVVPFKSYLHRYP 255
V E+ Y P+ G + + + YP
Sbjct: 60 LYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYP 119
Query: 256 ------------TPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTP------QWEWL 297
T S S + + +A I + ++ + W L
Sbjct: 120 KWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDL 179
Query: 298 REELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHA 357
+ +L + ++IV+ PIY+S + + +VD+ +GH +
Sbjct: 180 KSQLSVAK-KIADFIIVVGDQPIYSS--GYSRGSSYLAYYLLPLLKDAEVDLYISGHDNN 236
Query: 358 YERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREAS 417
E + + +IT G G +G + S F +
Sbjct: 237 MEVI-------------------EDNDMAHITCGSGSMSQGK----SGMKNSKSLFFSSD 273
Query: 418 YGHSTLEIKNRTHAFYHWNRNDDGK 442
G E+ + + + G+
Sbjct: 274 IGFCVHEL-SNNGIVTKFVSSKKGE 297
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 62.9 bits (152), Expect = 9e-11
Identities = 28/217 (12%), Positives = 64/217 (29%), Gaps = 39/217 (17%)
Query: 189 VLFLGDLSY-ADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI------------ 235
++ GDL+ ++ ++ + + GNH+I
Sbjct: 96 LIISGDLTNNGEKTSHEELAKKLTQVEK------NGTQVFVVPGNHDINNPWARKFEKDK 149
Query: 236 EYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRAS-AHIIVLSS--YSPFVKYTP 292
+ T F + S L Y +S +++L + Y ++
Sbjct: 150 QLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGN 209
Query: 293 ----------QWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESM--RAAFES 340
+W++E + LI ++H + + N+ +G ++
Sbjct: 210 PTTEGGLTAGTLDWIKESSALAKKNGAK-LIPVLHHNLTDHNDV-IQKGYTINYNQQVID 267
Query: 341 WFVRYKVDVVFAGHVHAYERSYRISNLH---YNISSG 374
+D +GH+H S +I +
Sbjct: 268 ALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTN 304
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 61.5 bits (149), Expect = 1e-10
Identities = 43/218 (19%), Positives = 70/218 (32%), Gaps = 39/218 (17%)
Query: 189 VLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ-----PWIWSAGNHEIEYMTYMGE 243
++F GDL+ D G ++ + + +W GNH+ +
Sbjct: 70 IVFTGDLA--------DKG-EPAAYRKLRGLVEPFAAQLGAELVWVMGNHD--------D 112
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKY----TPQWEWLRE 299
+ +L +PL IIVL + P + Q WL E
Sbjct: 113 RAELRKFLLDEAPSM------APLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAE 166
Query: 300 ELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMR--AAFESWFVRYKVDVVFAGHVHA 357
EL + T I+ +H P S +R AA V + AGH+H
Sbjct: 167 ELATPAPDGT---ILALHHPPIPSVLDM-AVTVELRDQAALGRVLRGTDVRAILAGHLH- 221
Query: 358 YERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGN 395
Y + + +++S C+ A DG
Sbjct: 222 YSTNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQ 259
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 7e-10
Identities = 30/216 (13%), Positives = 60/216 (27%), Gaps = 34/216 (15%)
Query: 189 VLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ-PWIWSAGNHEIEYMTYMGEVVPF 247
V+ GD+ + G R + + + + P GNH+ + F
Sbjct: 45 VVVSGDIV--------NCG-RPEEYQVARQILGSLNYPLYLIPGNHD--------DKALF 87
Query: 248 KSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKY----TPQWEWLREELKK 303
YL ++ + A+ + ++ + S WL +L +
Sbjct: 88 LEYLQPLC--PQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFE 145
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMR--AAFESWFVRYK-VDVVFAGHVHAYER 360
+ + MH P A M+ + + R+ + +F GH H
Sbjct: 146 GGDKPA---TIFMHHPPLPLGNAQ-MDPIACENGHRLLALVERFPSLTRIFCGHNH-SLT 200
Query: 361 SYRISNLHYNISSGDC--FPVPDKSAPVYITVGDGG 394
+ + G P Y +
Sbjct: 201 MTQYRQALISTLPGTVHQVPYCHADTDPYYDLSPAS 236
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 50.3 bits (119), Expect = 6e-07
Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 1/100 (1%)
Query: 293 QWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFA 352
Q +WL L D ++ ++ H+P++ + A V A
Sbjct: 205 QLQWLDAVLTLSDHKQERV-LIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIA 263
Query: 353 GHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGD 392
GH H R S + G P A + +
Sbjct: 264 GHDHDGGRCTDSSGAQHITLEGVIETPPHSHAFATAYLYE 303
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 5e-04
Identities = 40/242 (16%), Positives = 73/242 (30%), Gaps = 64/242 (26%)
Query: 59 PQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFD--FTAEGTVNNYTFYKY-- 114
P HI + + W + V +K E T
Sbjct: 382 PPSAHIPT-----ILLSLIWFDVIKSDVMVV-----VNKLHKYSLVEKQPKESTISIPSI 431
Query: 115 ---------KSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGII 165
+H+ +VD Y+ + + PP +D Y + I
Sbjct: 432 YLELKVKLENEYALHRSIVD--HYNIPKTF---------DSDDLIPPYLD---QYFYSHI 477
Query: 166 GDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA--- 222
G ++ L +EH ++FL D F++ +R DS S
Sbjct: 478 G-----HH-LKNIEHPERMTLFRMVFL-DFR------FLEQKIRHDSTAWNASGSILNTL 524
Query: 223 -----YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAH 277
Y+P+I +++ +Y + ++ F L + + SK + L A+
Sbjct: 525 QQLKFYKPYI---CDNDPKYERLVNAILDF---LPKIEENLICSKYTDLLRIALMAEDEA 578
Query: 278 II 279
I
Sbjct: 579 IF 580
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 7e-04
Identities = 23/220 (10%), Positives = 48/220 (21%), Gaps = 36/220 (16%)
Query: 165 IGDLGQTYNSLSTL-EHYMESGAQTVLFLGDL-----------------SYADRYQFIDV 206
I + + ++ L L E ++ +G++ +R +
Sbjct: 11 IKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHEN 70
Query: 207 GVRWDSWGRFVER--SAAYQPWIWSAGNHEIEYMTYMGE------VVPFKSYLHRYPTPH 258
R G ++ ++ P LH
Sbjct: 71 EHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGW 130
Query: 259 LASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHV 318
+ + ++ LK V+ K L+ + +
Sbjct: 131 RGEFEVIGFGGLLTE--------HEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYT 182
Query: 319 PIYNSNEAHFMEGESMR--AAFESWFVRYKVDVVFAGHVH 356
P E A + +V GHV
Sbjct: 183 PPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 479 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.97 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.9 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.88 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.88 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.79 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.53 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.53 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.5 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.36 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.33 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.33 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.27 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.26 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.26 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.23 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.23 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.11 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.07 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.06 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.03 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.99 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.98 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.93 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.92 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.72 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.71 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.57 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.54 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.51 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.43 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.43 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.26 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.03 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.02 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.01 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 97.89 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.88 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.85 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.79 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.37 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 97.2 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.19 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.05 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.02 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.99 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 96.95 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 96.92 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 96.88 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 96.83 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.81 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.78 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.77 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 96.73 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 96.69 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.65 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.59 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.58 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 96.56 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.54 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.5 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 96.49 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.44 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.44 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.43 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.37 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.36 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.32 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 96.31 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.28 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 96.28 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.2 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 96.2 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 96.16 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.06 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.04 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 96.04 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.04 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.01 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 95.94 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 95.91 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 95.91 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 95.85 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 95.85 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 95.84 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 95.82 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 95.8 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 95.79 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.72 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 95.66 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.59 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 95.55 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.51 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 95.45 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 95.37 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 95.36 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 95.34 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 95.31 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 95.31 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 95.31 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 95.31 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 95.26 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 95.19 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 95.19 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 95.18 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 95.17 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 95.09 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.05 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 95.02 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.01 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 94.96 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 94.96 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 94.93 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 94.93 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.91 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 94.91 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 94.91 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 94.91 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 94.88 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 94.82 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 94.78 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 94.74 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 94.58 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 94.54 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 94.49 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 94.4 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 94.38 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 94.37 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 94.24 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 94.22 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 94.18 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 94.15 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 94.03 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 93.97 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 93.92 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 93.87 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 93.83 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 93.58 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 93.51 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 93.46 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 93.39 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 93.29 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 93.27 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 93.27 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 93.24 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 93.07 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 92.77 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 92.69 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 92.65 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 92.53 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 92.53 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 92.17 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 92.12 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 92.1 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 92.0 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 91.96 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 91.93 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 91.89 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 91.88 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 91.74 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 91.62 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 91.4 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 91.36 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 91.32 | |
| 2uvf_A | 608 | Exopolygalacturonase; GH28, pectin, cell WALL, hyd | 91.13 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 90.68 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 90.17 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 90.12 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 89.97 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 89.85 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 89.55 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 89.43 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 89.01 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 88.75 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 88.49 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 88.12 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 86.51 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 85.59 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 85.41 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 85.13 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 83.26 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 82.74 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 82.04 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 81.61 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 81.54 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 81.24 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 81.04 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 80.54 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-76 Score=603.34 Aligned_cols=419 Identities=58% Similarity=1.054 Sum_probs=367.7
Q ss_pred CcCCCCcccccCCCCCCCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEE
Q 011679 42 DIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQ 121 (479)
Q Consensus 42 ~~p~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (479)
+||++++++++|++...|+||||++|+++.++|+|+|.|.+.++.+.|+|++.++.+..++.|+..+|.+.+...+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 81 (424)
T 2qfp_A 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 81 (424)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEE
T ss_pred CCCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEE
Confidence 68999999999999999999999999887899999999987778899999999988888888888777655567899999
Q ss_pred EEeCCCCCCCEEEEEeCCCCCceeEEEECCCCCCCCCCeEEEEEecCCCCCCcHHHHHHHHHh--CCCEEEEcCcccccC
Q 011679 122 CLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYAD 199 (479)
Q Consensus 122 v~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~--~pd~vl~~GD~~y~~ 199 (479)
|+|+||+|+|+|+|||+.+++|++++|+|+|.+++..++||+++||+|.......+++++.+. +|||||++||++|.+
T Consensus 82 v~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~ 161 (424)
T 2qfp_A 82 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYAD 161 (424)
T ss_dssp EEECSCCTTCEEEEEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGG
T ss_pred EEECCCCCCCEEEEEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCcccccc
Confidence 999999999999999998888999999999988777899999999999876556678888776 899999999999987
Q ss_pred cccccccchhhhHHHHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEE
Q 011679 200 RYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHII 279 (479)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi 279 (479)
+....+ ..+|+.|.+.++++.+.+|+|+++||||+.+.+..++...|..|..+|.||.++.....+.||+|++|+++||
T Consensus 162 ~~~~~~-~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i 240 (424)
T 2qfp_A 162 RYPNHD-NVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHII 240 (424)
T ss_dssp GSGGGC-THHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEE
T ss_pred cccccc-chHHHHHHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEE
Confidence 654333 5678899999999888899999999999975433333335677888899997655556678999999999999
Q ss_pred EEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccce
Q 011679 280 VLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYE 359 (479)
Q Consensus 280 ~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 359 (479)
+||++..++.+.+|++||+++|+++++++++|+||++|+|+++....++.++..+++.|+++|++++||++||||+|.|+
T Consensus 241 ~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~ 320 (424)
T 2qfp_A 241 VLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYE 320 (424)
T ss_dssp ECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEE
T ss_pred EecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhh
Confidence 99998877777899999999999976666889999999999987655556677889999999999999999999999999
Q ss_pred eeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcC
Q 011679 360 RSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRND 439 (479)
Q Consensus 360 r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~ 439 (479)
|++|+++..+.+.+|.|.++.++++++||++|+||+.++....+..++|+|++|++..|||++|++.|+|++.|+|+++.
T Consensus 321 r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~ 400 (424)
T 2qfp_A 321 RSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQ 400 (424)
T ss_dssp EECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETT
T ss_pred eeccccCcceeccCCccccccCCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECC
Confidence 99999988877788889888888999999999999998765456678899999999999999999999999999999999
Q ss_pred CCceeeeeeEEEEecccCChhh
Q 011679 440 DGKKVATDSFILHNQYWASNRR 461 (479)
Q Consensus 440 ~g~~~~~D~f~i~~~~~~~~~~ 461 (479)
||++++.|+|||.|+++.|..+
T Consensus 401 ~g~~~~~D~~~i~~~~~~~~~~ 422 (424)
T 2qfp_A 401 DGVAVEADSVWFFNRHWYPVDD 422 (424)
T ss_dssp SCTTCCSEEEEEECTTTCCCCC
T ss_pred CCCEEeeeEEEEEecccccccc
Confidence 9998789999999999999654
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-76 Score=602.32 Aligned_cols=418 Identities=62% Similarity=1.143 Sum_probs=365.7
Q ss_pred CcCcCCCCcccccCCCCCCCceEEEEeecCCCCcEEEEEEcC-CCCCCCEEEEeecCCCCceEEEeEEEEEeeecceece
Q 011679 40 SIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTP-HEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGY 118 (479)
Q Consensus 40 ~~~~p~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~-~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (479)
+.+||+++++++++++..+|+||||++++++.++|+|+|.|. +.++.++|+|++.++.+..++.|+..+|.+.+...+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
T 1xzw_A 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAF 85 (426)
T ss_dssp HHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCE
T ss_pred cccCCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCE
Confidence 467999999999999999999999999998889999999999 7778899999999988888888888777765667899
Q ss_pred EEEEEeCCCCCCCEEEEEeCCCCCceeEEEECCCCCCCCCCeEEEEEecCCCCCCcHHHHHHHHHh--CCCEEEEcCccc
Q 011679 119 IHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLS 196 (479)
Q Consensus 119 ~~~v~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~--~pd~vl~~GD~~ 196 (479)
+|+|+|+||+|+|+|+|||+++.+|++++|+|+|.+++..++||+++||+|.......+++++.+. +|||||++||++
T Consensus 86 ~~~v~l~gL~p~t~Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~ 165 (426)
T 1xzw_A 86 IHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLS 165 (426)
T ss_dssp EEEEEECCCCTTCEEEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCC
T ss_pred EEEEEECCCCCCCEEEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChh
Confidence 999999999999999999998778999999999988777899999999999865556778888876 899999999999
Q ss_pred ccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCE
Q 011679 197 YADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASA 276 (479)
Q Consensus 197 y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~ 276 (479)
|+++....+ ..+|+.|.+.++++.+.+|+|+++||||+..+...++...+..|..+|.||.+++....+.||+|++|++
T Consensus 166 y~~~~~~~~-~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~ 244 (426)
T 1xzw_A 166 YSNRWPNHD-NNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASA 244 (426)
T ss_dssp CGGGSGGGC-THHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTE
T ss_pred hcccCCccc-chHHHHHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCE
Confidence 987653322 5678889999999988999999999999975432233345677888999998765556778999999999
Q ss_pred EEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccc
Q 011679 277 HIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVH 356 (479)
Q Consensus 277 ~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H 356 (479)
+||+||++..++.+.+|++||+++|+++++++++|+||++|+|+++....++.++..+++.|+++|.+++||++|+||+|
T Consensus 245 ~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 324 (426)
T 1xzw_A 245 HIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVH 324 (426)
T ss_dssp EEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSS
T ss_pred EEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChh
Confidence 99999998877788999999999999987677899999999999987665555667889999999999999999999999
Q ss_pred cceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEE
Q 011679 357 AYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWN 436 (479)
Q Consensus 357 ~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~ 436 (479)
.|+|++|+++.++.+.+|.|.++.++++++||++|+||+.++....+..++|+|++|+...|||++|+|.|+|++.|+|+
T Consensus 325 ~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~ 404 (426)
T 1xzw_A 325 SYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWH 404 (426)
T ss_dssp SEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEE
T ss_pred hheeeeeecCccccccCCccccccCCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEE
Confidence 99999999988887788888888888999999999999988754456667899999999999999999999999999999
Q ss_pred EcCCCceeeeeeEEEEecccCC
Q 011679 437 RNDDGKKVATDSFILHNQYWAS 458 (479)
Q Consensus 437 ~~~~g~~~~~D~f~i~~~~~~~ 458 (479)
++.||++++.|+|||.|+++.|
T Consensus 405 ~~~dg~~~~~D~~~i~~~~~~~ 426 (426)
T 1xzw_A 405 RNQDGASVEADSLWLLNRYWAS 426 (426)
T ss_dssp ETTSCTTCCSEEEEEECSCC--
T ss_pred ECCCCCEEEeEEEEEEecccCC
Confidence 9999997678999999998864
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=375.54 Aligned_cols=371 Identities=17% Similarity=0.187 Sum_probs=253.0
Q ss_pred ceEEEEeecCCCCcEEEEEEcCCCC---------CCCEEEEeecCC--CCceEEEeEEEEEeeecceeceEEEEEeCCCC
Q 011679 60 QQVHITQGDYDGKAVIISWVTPHEP---------GPSTVSYGTSAD--KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (479)
Q Consensus 60 ~~v~l~~~~~~~~~~~v~W~t~~~~---------~~~~v~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~ 128 (479)
...-++.| ||..+.+|.|++.... ....|+|..+.+ +...++.|+..+.+ +.+|+|+|+|+||+
T Consensus 9 f~~GvasG-Dp~~~~vilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~~----~~~~t~~v~v~gL~ 83 (527)
T 2yeq_A 9 FTLGVASG-DPLSDSVVLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAKP----SLAHSVHVEADGLE 83 (527)
T ss_dssp CTTCEEEE-CCCSSCEEEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEECG----GGTTEEEEEECSCC
T ss_pred cccccccc-CCCCCeEEEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEecC----CCceEEEeecCCcC
Confidence 33335555 5667777899987421 234666655544 44567777776643 67899999999999
Q ss_pred CCCEEEEEeCCC-CCceeEEEECCCCCCCC-CCeEEEEEecCCCCCCcHHHHHHHHHhCCCEEEEcCcccccCcccc---
Q 011679 129 YDTKYYYKIGSG-DSSREFWFQTPPKIDPD-ASYKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQF--- 203 (479)
Q Consensus 129 p~t~Y~Yrv~~~-~~s~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~y~~~~~~--- 203 (479)
|+|+|+|||..+ .+|++++|+|+|.+++. .+++|+++||.+...+.+.++.+|.+.+||||||+||++|+++...
T Consensus 84 P~t~Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~ 163 (527)
T 2yeq_A 84 PNKVYYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVS 163 (527)
T ss_dssp TTCEEEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCC
T ss_pred CCCEEEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCcccc
Confidence 999999999876 46899999999987654 6899999999998666678889988889999999999999986431
Q ss_pred ----------------cccchhhhHHH--HHHHhhhccCCeEEcCCCcccccccCCCcccc------c-----ccccccc
Q 011679 204 ----------------IDVGVRWDSWG--RFVERSAAYQPWIWSAGNHEIEYMTYMGEVVP------F-----KSYLHRY 254 (479)
Q Consensus 204 ----------------~~~~~~~~~~~--~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~------~-----~~~~~~~ 254 (479)
.+|+.+|..+. ..++.+++.+|||++|||||+.++...+.... | .+++.+|
T Consensus 164 ~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~ 243 (527)
T 2yeq_A 164 KTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYY 243 (527)
T ss_dssp TTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHH
T ss_pred cccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHH
Confidence 11223333332 34777888999999999999986643221110 1 2334444
Q ss_pred -ccCcCCC----CCCCCcEEEEEeCC-EEEEEEcCCCCC----------------------CCChHHHHHHHHHHhhccC
Q 011679 255 -PTPHLAS----KSSSPLWYAIRRAS-AHIIVLSSYSPF----------------------VKYTPQWEWLREELKKVDR 306 (479)
Q Consensus 255 -~~p~~~~----~~~~~~yysf~~g~-~~fi~Ldt~~~~----------------------~~~~~Q~~WL~~~L~~~~~ 306 (479)
.||.+.. +...+.||+|++|+ ++||+|||+... ..+.+|++||+++|++
T Consensus 244 e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~--- 320 (527)
T 2yeq_A 244 EHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGS--- 320 (527)
T ss_dssp HHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHH---
T ss_pred HhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhc---
Confidence 3554321 23457899999999 999999996421 2468999999999998
Q ss_pred CCCCeEEEEeccccccCCC----------CccCcCHHHHHHHHHHHHHcCcc--EEEecccccceeeeeccCCcccccCC
Q 011679 307 EKTPWLIVLMHVPIYNSNE----------AHFMEGESMRAAFESWFVRYKVD--VVFAGHVHAYERSYRISNLHYNISSG 374 (479)
Q Consensus 307 ~~~~w~Iv~~H~P~~~~~~----------~~~~~~~~~~~~l~~l~~~~~Vd--lvlsGH~H~y~r~~~~~~~~~~~~~g 374 (479)
++++|+||++|+|++.... ..|......|++|+++|.+++|+ ++|+||+|.+++.......
T Consensus 321 s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~------- 393 (527)
T 2yeq_A 321 STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDF------- 393 (527)
T ss_dssp CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESST-------
T ss_pred CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccc-------
Confidence 6789999999999987532 23445567899999999999985 9999999999998642110
Q ss_pred cccccCCCC----CCeEEEeCC--CCCCCCCCC---CCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCC-----
Q 011679 375 DCFPVPDKS----APVYITVGD--GGNQEGLAG---KFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDD----- 440 (479)
Q Consensus 375 ~~~~~~~~~----~~~~i~~G~--gG~~~~~~~---~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~----- 440 (479)
.++. ++-+++++- +|....... .+...+| ...|.+...||++|+| +.+.+..+|+...+
T Consensus 394 -----~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np-~~~~~~~~~Gy~~v~v-t~~~~~~~~~~v~~v~~~~ 466 (527)
T 2yeq_A 394 -----EKTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENP-HIQFFNDYRGYVRCTV-TPHQWKADYRVMPFVTEPG 466 (527)
T ss_dssp -----TCTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCT-TEEEEEBCEEEEEEEE-ETTEEEEEEEEESCSSSSC
T ss_pred -----cCCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCC-cceeeeCCCCEEEEEE-eccEEEEEEEEeCCccCCC
Confidence 0111 233332221 111100000 0001233 3456667899999999 45667788765432
Q ss_pred CceeeeeeEEEE
Q 011679 441 GKKVATDSFILH 452 (479)
Q Consensus 441 g~~~~~D~f~i~ 452 (479)
+.+...=+|.+.
T Consensus 467 ~~~~~~~~~~~~ 478 (527)
T 2yeq_A 467 AAISTRASFVYQ 478 (527)
T ss_dssp CCCEEEEEEEEC
T ss_pred CcceeeeEEEEe
Confidence 333334455553
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=302.95 Aligned_cols=261 Identities=15% Similarity=0.201 Sum_probs=189.4
Q ss_pred CCeEEEEEecCCCCCCcHHHH----HHHHH-hCCCEEEEcCcccccCcccccccchhhh-HHHHHHHhh--hccCCeEEc
Q 011679 158 ASYKFGIIGDLGQTYNSLSTL----EHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWD-SWGRFVERS--AAYQPWIWS 229 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~~~~l----~~i~~-~~pd~vl~~GD~~y~~~~~~~~~~~~~~-~~~~~~~~~--~~~~P~~~v 229 (479)
.++||+++||+|.+...+..+ ..+.+ .+|||||++||++|. +....+ +.+|. .|.+.++.+ ...+||+++
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~~~-d~~~~~~f~~~~~~~~~~~~~P~~~v 79 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVKGLN-DPAWKNLYEDVYSEEKGDMYMPFFTV 79 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCSTT-CTHHHHHTTTTSCCGGGTTCSEEEEC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCcCc-cHHHHHHHHHHhhhhhhhhCCCEEEe
Confidence 379999999999865444333 23333 399999999999998 543222 34453 333333333 347899999
Q ss_pred CCCcccccccCCCcc-----------------ccccccccccccCcCCCCCCCCcEEEE----Ee---------C----C
Q 011679 230 AGNHEIEYMTYMGEV-----------------VPFKSYLHRYPTPHLASKSSSPLWYAI----RR---------A----S 275 (479)
Q Consensus 230 ~GNHD~~~~~~~~~~-----------------~~~~~~~~~~~~p~~~~~~~~~~yysf----~~---------g----~ 275 (479)
+||||+..+...+.. ........+|.||. .||++ .. | .
T Consensus 80 lGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~~~ 151 (342)
T 3tgh_A 80 LGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKDLA 151 (342)
T ss_dssp CCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEEEE
T ss_pred CCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCCce
Confidence 999999754211000 00122457788884 57764 32 3 4
Q ss_pred EEEEEEcCCCCCC----------CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHc
Q 011679 276 AHIIVLSSYSPFV----------KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY 345 (479)
Q Consensus 276 ~~fi~Ldt~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~ 345 (479)
++||+|||..... ...+|++||+++|+. ++|+||++|||+++.+.. .....+++.|+++|+++
T Consensus 152 v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~~ll~~~ 224 (342)
T 3tgh_A 152 AAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS--RGSSYLAYYLLPLLKDA 224 (342)
T ss_dssp EEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--CCCHHHHHHTHHHHHHT
T ss_pred EEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--CCcHHHHHHHHHHHHHc
Confidence 8999999964321 124899999999954 479999999999987643 23467789999999999
Q ss_pred CccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeeccccEEEEEE
Q 011679 346 KVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEI 425 (479)
Q Consensus 346 ~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v 425 (479)
+|+++||||+|.|+|..+ +++.||++|+||..... . ...++|+.|+...+||+++++
T Consensus 225 ~VdlvlsGH~H~~~~~~~-------------------~g~~~iv~Ga~g~~~~~--~--~~~~~~s~f~~~~~Gf~~l~v 281 (342)
T 3tgh_A 225 EVDLYISGHDNNMEVIED-------------------NDMAHITCGSGSMSQGK--S--GMKNSKSLFFSSDIGFCVHEL 281 (342)
T ss_dssp TCCEEEECSSSSEEEEEE-------------------TTEEEEEECCSSCCCCC--C--SSCCTTEEEEECSSEEEEEEE
T ss_pred CCCEEEECCCcceeEEee-------------------CCcEEEEeCcccccccc--C--CCCCCcceeecCCCcEEEEEE
Confidence 999999999999999874 35899999999876431 1 123568999989999999999
Q ss_pred ecccEEEEEEEEcCCCceeeeeeEEEEecccCChhh
Q 011679 426 KNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRR 461 (479)
Q Consensus 426 ~~~t~~~~~~~~~~~g~~~~~D~f~i~~~~~~~~~~ 461 (479)
+.+.+.++|+.+.+|++ +|+|+|.|+--+++.+
T Consensus 282 -~~~~l~~~~~~~~~G~v--ld~~~i~k~~~~~~~~ 314 (342)
T 3tgh_A 282 -SNNGIVTKFVSSKKGEV--IYTHKLNIKKKKTLDK 314 (342)
T ss_dssp -ETTEEEEEEEETTTTEE--EEEEEEECCCCSSCCG
T ss_pred -ECCEEEEEEEECCCCcE--EEEEEEECCCCccccc
Confidence 45679999997678987 7999999987776654
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=261.04 Aligned_cols=257 Identities=19% Similarity=0.274 Sum_probs=175.0
Q ss_pred CCeEEEEEecCCCCCCc----------HHHHHHHH-HhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh----c
Q 011679 158 ASYKFGIIGDLGQTYNS----------LSTLEHYM-ESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA----A 222 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~----------~~~l~~i~-~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~----~ 222 (479)
.++||+++||+|..... ...+..+. +.+|||||++||++|..+..... .. .|.+.++.+. .
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~-~~---~~~~~~~~~~~~~~l 80 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-DK---RFQETFEDVFSDPSL 80 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-CT---HHHHHTTTTSCSGGG
T ss_pred CceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcc-hH---HHHHHHHHHcCchhh
Confidence 58999999999986421 12333322 34999999999999986643222 22 2333333321 2
Q ss_pred -cCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEe------CCEEEEEEcCCCC---------
Q 011679 223 -YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRR------ASAHIIVLSSYSP--------- 286 (479)
Q Consensus 223 -~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~------g~~~fi~Ldt~~~--------- 286 (479)
.+|+++++||||+..+.. ....|.....+|.+| ..||++.+ ++++||+||+...
T Consensus 81 ~~~p~~~v~GNHD~~~~~~--~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~ 150 (313)
T 1ute_A 81 RNVPWHVLAGNHDHLGNVS--AQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVS 150 (313)
T ss_dssp TTCCEEECCCHHHHHSCHH--HHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTT
T ss_pred cCCCEEEECCCCccCCCcc--ccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCccccc
Confidence 689999999999863211 111122223445454 35888888 4899999998431
Q ss_pred --------CCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccc
Q 011679 287 --------FVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAY 358 (479)
Q Consensus 287 --------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y 358 (479)
...+.+|++||++.|++. ..+|+|+++|+|++...... ....+++.+.+++++++|+++||||+|.+
T Consensus 151 ~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~~~--~~~~~~~~l~~~l~~~~v~~~l~GH~H~~ 225 (313)
T 1ute_A 151 QQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEHG--PTHCLVKQLLPLLTTHKVTAYLCGHDHNL 225 (313)
T ss_dssp CSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSSC--CCHHHHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred cccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCCCC--CcHHHHHHHHHHHHHcCCcEEEECChhhh
Confidence 012468999999999984 45899999999998765422 23456788999999999999999999999
Q ss_pred eeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeec----cccEEEEEEecccEEEEE
Q 011679 359 ERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREA----SYGHSTLEIKNRTHAFYH 434 (479)
Q Consensus 359 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~----~~Gf~~l~v~~~t~~~~~ 434 (479)
++..+ .+++.||++|++|...+.........+++..|... ..||++|++. .+.+.++
T Consensus 226 ~~~~~------------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~-~~~~~~~ 286 (313)
T 1ute_A 226 QYLQD------------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEIT-PKEMSVT 286 (313)
T ss_dssp EEEEC------------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEEC-SSCEEEE
T ss_pred hhccC------------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEEE-cCEEEEE
Confidence 98763 25688999999886533111000011134455433 3799999995 5568899
Q ss_pred EEEcCCCceeeeeeEEEEecc
Q 011679 435 WNRNDDGKKVATDSFILHNQY 455 (479)
Q Consensus 435 ~~~~~~g~~~~~D~f~i~~~~ 455 (479)
|+.. +|++ +|+|+|.|+-
T Consensus 287 ~~~~-~g~~--~~~~~l~~~~ 304 (313)
T 1ute_A 287 YIEA-SGKS--LFKTKLPRRA 304 (313)
T ss_dssp EEET-TSCE--EEEEEECCCC
T ss_pred EEcC-CCcE--EEEEEecccc
Confidence 9874 7876 6999998764
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=200.42 Aligned_cols=236 Identities=19% Similarity=0.149 Sum_probs=155.0
Q ss_pred CCCeEEEEEecCCCCCC---------c----HHHHHHHHH--hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh
Q 011679 157 DASYKFGIIGDLGQTYN---------S----LSTLEHYME--SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA 221 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~---------~----~~~l~~i~~--~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 221 (479)
...+||+++||+|.... . ...++.+.+ .++|+||++||+++... ...|+.+.+.++.+.
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~l~ 96 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE------PAAYRKLRGLVEPFA 96 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC------HHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHHHH
Confidence 46899999999997431 1 224455555 48999999999996432 234455666676663
Q ss_pred c--cCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC----CCChHHHH
Q 011679 222 A--YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF----VKYTPQWE 295 (479)
Q Consensus 222 ~--~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~----~~~~~Q~~ 295 (479)
. .+|+++++||||+... +...+.-. .......+|+++.++++|++||+.... ....+|++
T Consensus 97 ~~~~~pv~~v~GNHD~~~~-----------~~~~~~~~---~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~ 162 (330)
T 3ib7_A 97 AQLGAELVWVMGNHDDRAE-----------LRKFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 162 (330)
T ss_dssp HHHTCEEEECCCTTSCHHH-----------HHHHHHCC---CCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHH
T ss_pred hhcCCCEEEeCCCCCCHHH-----------HHHHhccc---ccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHH
Confidence 3 6899999999997421 11111100 011235689999999999999996532 24689999
Q ss_pred HHHHHHhhccCCCCCeEEEEeccccccCCCCccC-cCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCC
Q 011679 296 WLREELKKVDREKTPWLIVLMHVPIYNSNEAHFM-EGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSG 374 (479)
Q Consensus 296 WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g 374 (479)
||++.|+.. ...++|+++|||++........ .....++.+.+++.+++++++|+||+|..+....
T Consensus 163 wl~~~l~~~---~~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~~----------- 228 (330)
T 3ib7_A 163 WLAEELATP---APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATF----------- 228 (330)
T ss_dssp HHHHHTTSC---CTTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEEE-----------
T ss_pred HHHHHHHhc---ccCCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccceE-----------
Confidence 999999985 2334889999998865432110 1112356788999999999999999999875431
Q ss_pred cccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCC
Q 011679 375 DCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDD 440 (479)
Q Consensus 375 ~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~ 440 (479)
+++.+++.|+.+..... ..+. ..........||..+++.+.+ +.++++.-..
T Consensus 229 --------~g~~~~~~gs~~~~~~~----~~~~-g~~~~~~~~~gy~iv~i~~~~-~~~~~v~~~~ 280 (330)
T 3ib7_A 229 --------VGIPVSVASATCYTQDL----TVAA-GGTRGRDGAQGCNLVHVYPDT-VVHSVIPLGG 280 (330)
T ss_dssp --------TTEEEEECCCSSCEECT----TSCT-TCCCEESCSCEEEEEEECSSC-EEEEEEECSC
T ss_pred --------CCEEEEecCcceeccCC----CCCC-cceeccCCCCceEEEEEECCC-eEEEEeccCC
Confidence 45667887776643221 0011 111222345789999996544 5677776433
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.4e-22 Score=194.50 Aligned_cols=227 Identities=19% Similarity=0.157 Sum_probs=145.6
Q ss_pred CCCeEEEEEecCCCCCCc----------------HHH----HHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHH
Q 011679 157 DASYKFGIIGDLGQTYNS----------------LST----LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRF 216 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~~----------------~~~----l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~ 216 (479)
...+||+++||+|..... ... ++.+.+.+||+||++||+++...... ...++.|...
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~---~~~~~~~~~~ 79 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRR---DASDRALDTV 79 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHT---TCHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcc---hHHHHHHHHH
Confidence 357999999999987521 122 33344458999999999997532111 1123445445
Q ss_pred HHhhhc-cCCeEEcCCCcccccccCCCccccccccccccc-------------cCcCCCCCCCCcEEEEEe-CCEEEEEE
Q 011679 217 VERSAA-YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYP-------------TPHLASKSSSPLWYAIRR-ASAHIIVL 281 (479)
Q Consensus 217 ~~~~~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~-------------~p~~~~~~~~~~yysf~~-g~~~fi~L 281 (479)
++.+.. .+|+++++||||...... ..+...+. +|. ....||+|+. ++++||+|
T Consensus 80 ~~~l~~~~~p~~~v~GNHD~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~l 147 (322)
T 2nxf_A 80 MAELDACSVDVHHVWGNHEFYNFSR-------PSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVLL 147 (322)
T ss_dssp HHHHHTTCSEEEECCCHHHHHHCCH-------HHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEEC
T ss_pred HHHHHhcCCcEEEecCCCCcccCCH-------HHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEEE
Confidence 544433 679999999999842110 01111111 221 2346899998 99999999
Q ss_pred cCCCC----------------------------------------------CCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 011679 282 SSYSP----------------------------------------------FVKYTPQWEWLREELKKVDREKTPWLIVL 315 (479)
Q Consensus 282 dt~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 315 (479)
|+... .....+|++||++.|++..+ ...++||+
T Consensus 148 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv~ 226 (322)
T 2nxf_A 148 DAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIF 226 (322)
T ss_dssp CTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEE
T ss_pred cCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEEE
Confidence 98541 01247899999999998532 13568999
Q ss_pred eccccccCCCCccCcCHHHHHHHHHHHHHc-CccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCC
Q 011679 316 MHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGG 394 (479)
Q Consensus 316 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG 394 (479)
+|+|++....... .....++.+.+++.++ +|+++|+||+|.+++... .+++.|++.|+.-
T Consensus 227 ~H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~------------------~~g~~~i~~~~~~ 287 (322)
T 2nxf_A 227 SHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD------------------SSGAQHITLEGVI 287 (322)
T ss_dssp ESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC------------------TTSCEEEECCCGG
T ss_pred EccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec------------------cCCceEEEecchh
Confidence 9999987653210 1111356788999998 799999999999987641 2456777766541
Q ss_pred CCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEE
Q 011679 395 NQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWN 436 (479)
Q Consensus 395 ~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~ 436 (479)
+ . + ....||..+++.+. .+.+..+
T Consensus 288 --~------~---~------~~~~~y~~v~~~~~-~~~~~~~ 311 (322)
T 2nxf_A 288 --E------T---P------PHSHAFATAYLYED-RMVMKGR 311 (322)
T ss_dssp --G------C---C------TTSCEEEEEEECSS-EEEEEEE
T ss_pred --h------C---C------CCCCcEEEEEEECC-eEEEEec
Confidence 1 0 0 12368999999644 3555433
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.6e-22 Score=189.30 Aligned_cols=231 Identities=12% Similarity=0.074 Sum_probs=145.8
Q ss_pred eEEEEEecCCCCCC---------cHHHH----HHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccC
Q 011679 160 YKFGIIGDLGQTYN---------SLSTL----EHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ 224 (479)
Q Consensus 160 ~~f~~~gD~~~~~~---------~~~~l----~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (479)
|||+++||+|.... ....+ +.+.+. ++|+||++||+++... ...|+.+.+.++.+ .+
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~l--~~ 72 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR------PEEYQVARQILGSL--NY 72 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC------HHHHHHHHHHHTTC--SS
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHhc--CC
Confidence 68999999998741 12333 344443 6899999999997432 22344444555443 57
Q ss_pred CeEEcCCCcccccccCCCcccccccccccc-ccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC----CCChHHHHHHHH
Q 011679 225 PWIWSAGNHEIEYMTYMGEVVPFKSYLHRY-PTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF----VKYTPQWEWLRE 299 (479)
Q Consensus 225 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~----~~~~~Q~~WL~~ 299 (479)
|+++++||||..... . ..+...| .++.+ ....+|+++.++++|++||+.... ....+|++||++
T Consensus 73 p~~~v~GNHD~~~~~----~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~ 141 (274)
T 3d03_A 73 PLYLIPGNHDDKALF----L---EYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEA 141 (274)
T ss_dssp CEEEECCTTSCHHHH----H---HHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHH
T ss_pred CEEEECCCCCCHHHH----H---HHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHH
Confidence 999999999985310 0 0111111 11110 023578899999999999996432 246899999999
Q ss_pred HHhhccCCCCCeEEEEeccccccCCCCcc-CcCHHHHHHHHHHHHHc-CccEEEecccccceeeeeccCCcccccCCccc
Q 011679 300 ELKKVDREKTPWLIVLMHVPIYNSNEAHF-MEGESMRAAFESWFVRY-KVDVVFAGHVHAYERSYRISNLHYNISSGDCF 377 (479)
Q Consensus 300 ~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~ 377 (479)
.|++. ..+++|+++|+|++....... .......+.+.++++++ +|+++|+||+|..+....
T Consensus 142 ~l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~-------------- 204 (274)
T 3d03_A 142 QLFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY-------------- 204 (274)
T ss_dssp HHHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEE--------------
T ss_pred HHHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheE--------------
Confidence 99984 346799999999987543110 00111245788999998 899999999999876531
Q ss_pred ccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCc-cceeeccccEEEEEEecccEEEEEEEEc
Q 011679 378 PVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDY-SAFREASYGHSTLEIKNRTHAFYHWNRN 438 (479)
Q Consensus 378 ~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~-~~~~~~~~Gf~~l~v~~~t~~~~~~~~~ 438 (479)
++..++++++.+..... . .+.+ +.+.....||..+++.+. .+.++++..
T Consensus 205 -----~g~~~~~~pg~~~~~~~----~--~~~~~~~~~~~~~gy~i~~i~~~-~~~~~~~~~ 254 (274)
T 3d03_A 205 -----RQALISTLPGTVHQVPY----C--HADTDPYYDLSPASCLMHRQVGE-QWVSYQHSL 254 (274)
T ss_dssp -----TTEEEEECCCSSCBCCC----C--SSCCSCEEBCCCCEEEEEEEETT-EEEEEEEEC
T ss_pred -----CCEEEEEcCCcceeecc----C--CCccccccccCCCceEEEEEeCC-cEEEEEEec
Confidence 23345555443322111 0 1112 223445689999999655 567777664
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.4e-18 Score=174.84 Aligned_cols=198 Identities=12% Similarity=0.111 Sum_probs=123.3
Q ss_pred CCCeEEEEEecCCCCCCc-----------------------HHHHH----HHHHhCCCEEEEcCcccccCcccccccchh
Q 011679 157 DASYKFGIIGDLGQTYNS-----------------------LSTLE----HYMESGAQTVLFLGDLSYADRYQFIDVGVR 209 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~~-----------------------~~~l~----~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~ 209 (479)
...+||++++|+|..... ...++ .+.+.+||+||++||+++... ...
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~------~~~ 110 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGE------KTS 110 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCC------HHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCC------HHH
Confidence 468999999999985321 22333 333458999999999997432 223
Q ss_pred hhHHHHHHHhhhc-cCCeEEcCCCcccccccCCCc--c-------ccccccccccccCc-CCC---CCCCCcEEEEEeCC
Q 011679 210 WDSWGRFVERSAA-YQPWIWSAGNHEIEYMTYMGE--V-------VPFKSYLHRYPTPH-LAS---KSSSPLWYAIRRAS 275 (479)
Q Consensus 210 ~~~~~~~~~~~~~-~~P~~~v~GNHD~~~~~~~~~--~-------~~~~~~~~~~~~p~-~~~---~~~~~~yysf~~g~ 275 (479)
++.+.+.++.+.. .+|+++++||||+........ . .....|...|.-.. ... ......|+.+..++
T Consensus 111 ~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 190 (443)
T 2xmo_A 111 HEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSK 190 (443)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSS
T ss_pred HHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCC
Confidence 4555556666543 689999999999853211000 0 00011122221000 000 00122355556789
Q ss_pred EEEEEEcCCCC------------CCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccC-cCHHHHHHHHHHH
Q 011679 276 AHIIVLSSYSP------------FVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFM-EGESMRAAFESWF 342 (479)
Q Consensus 276 ~~fi~Ldt~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~ 342 (479)
++|++||+... .....+|++||++.|++... ....+|+++|+|++........ .....++.+.+++
T Consensus 191 ~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll 269 (443)
T 2xmo_A 191 VWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDAL 269 (443)
T ss_dssp EEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHH
T ss_pred EEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCCcccccccccccccccHHHHHHHH
Confidence 99999999642 12467999999999987632 2346899999999865321100 0112356788999
Q ss_pred HHcCccEEEecccccceee
Q 011679 343 VRYKVDVVFAGHVHAYERS 361 (479)
Q Consensus 343 ~~~~VdlvlsGH~H~y~r~ 361 (479)
++++|+++|+||+|.....
T Consensus 270 ~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 270 TEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHTTCCEEEECSSCSCEEE
T ss_pred HHcCCeEEEECCcccCchh
Confidence 9999999999999997654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.2e-14 Score=133.16 Aligned_cols=173 Identities=9% Similarity=0.015 Sum_probs=97.4
Q ss_pred CeEEEEEecCCCCCCcHHH-HHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-cCCeEEcCCCcccc
Q 011679 159 SYKFGIIGDLGQTYNSLST-LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQPWIWSAGNHEIE 236 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~~~-l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~v~GNHD~~ 236 (479)
.+||+++||+|.+...... ++.+.+.++|+||++||++..... . +.+.+.++.+.. ..|+++++||||..
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~-----~---~~~~~~~~~l~~~~~pv~~v~GNHD~~ 76 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAK-----S---RDYAAFFRILSEAHLPTAYVPGPQDAP 76 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCC-----H---HHHHHHHHHHGGGCSCEEEECCTTSCS
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCC-----H---HHHHHHHHHHHhcCCcEEEECCCCCch
Confidence 5899999999987433322 333344489999999999964311 1 233344444433 57999999999985
Q ss_pred cccCCCccccccccccccccCcCCCCCCCCcEEEEEeC-CEEEEEEcCCC--CCCCChH--------HHHHHHHHHhhcc
Q 011679 237 YMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRA-SAHIIVLSSYS--PFVKYTP--------QWEWLREELKKVD 305 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g-~~~fi~Ldt~~--~~~~~~~--------Q~~WL~~~L~~~~ 305 (479)
.. .... ..+......|... ...+. .+.++ ++.|+.++... ++....+ +.+|+++.|++..
T Consensus 77 ~~---~~~~--~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (228)
T 1uf3_A 77 IW---EYLR--EAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELK 147 (228)
T ss_dssp HH---HHHH--HHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSC
T ss_pred hH---HHHH--hhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCC
Confidence 21 0000 0000000001000 00011 23455 78888887421 1111122 2344455555532
Q ss_pred CCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccc
Q 011679 306 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVH 356 (479)
Q Consensus 306 ~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H 356 (479)
..+.|+++|+|++...... .. .+.+.+++++++++++++||+|
T Consensus 148 ---~~~~il~~H~p~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 148 ---DYPKIFLFHTMPYHKGLNE-QG----SHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp ---SCCEEEEESSCBCBTTTBT-TS----BHHHHHHHHHHCCSEEEECCSS
T ss_pred ---CCCeEEEEccCcccCCccc-cC----HHHHHHHHHHhCCCEEEEcccc
Confidence 2368999999997642111 11 1356677888899999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.53 E-value=4.5e-14 Score=133.99 Aligned_cols=186 Identities=11% Similarity=0.100 Sum_probs=100.0
Q ss_pred CeEEEEEecCCCCCCcHH-HHHHHHHhCCCEEEEcCcccccCccccc--------cc--chh--------hhHHHHHHHh
Q 011679 159 SYKFGIIGDLGQTYNSLS-TLEHYMESGAQTVLFLGDLSYADRYQFI--------DV--GVR--------WDSWGRFVER 219 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~~-~l~~i~~~~pd~vl~~GD~~y~~~~~~~--------~~--~~~--------~~~~~~~~~~ 219 (479)
++||+++||+|.+..... .++.+.+.++|+||++||++........ .+ ... .+.+.+.++.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 689999999999765443 3445555699999999999964321000 00 000 0224445555
Q ss_pred hhc-cCCeEEcCCCcccccccCCCccccccccccccc-cCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC-CCChHHHH-
Q 011679 220 SAA-YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYP-TPHLASKSSSPLWYAIRRASAHIIVLSSYSPF-VKYTPQWE- 295 (479)
Q Consensus 220 ~~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~-~~~~~Q~~- 295 (479)
+.. ..|+++++||||...... +........ .|.. ... .....+.++++.|++++..... ....+|+.
T Consensus 85 l~~~~~pv~~v~GNHD~~~~~~------~~~~~~~~~~~~~~--~~l-~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 155 (260)
T 2yvt_A 85 IGELGVKTFVVPGKNDAPLKIF------LRAAYEAETAYPNI--RVL-HEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLK 155 (260)
T ss_dssp HHTTCSEEEEECCTTSCCHHHH------HHHHHHTTTTCTTE--EEC-SSEEEEETTTEEEEEECSEEESSCCBSSSSCE
T ss_pred HHhcCCcEEEEcCCCCchhhhh------HHHHhhhccCCcce--EEe-cCcceEEECCEEEEecCCCcCCCCcCHHHHhh
Confidence 544 579999999999753110 000000000 0000 000 0112367889999999753210 11112221
Q ss_pred ---HHH----HHHhhccCCCCCeEEEEeccccccCCCCcc--CcCHHHHHHHHHHHHHcCccEEEecccc
Q 011679 296 ---WLR----EELKKVDREKTPWLIVLMHVPIYNSNEAHF--MEGESMRAAFESWFVRYKVDVVFAGHVH 356 (479)
Q Consensus 296 ---WL~----~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~--~~~~~~~~~l~~l~~~~~VdlvlsGH~H 356 (479)
|+. +.|++. .....|+++|+|++....... .........+.+++.+++++++++||+|
T Consensus 156 ~~~~~~~~~l~~l~~~---~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 156 YPRWYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp EEHHHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred cchhhHHHHHHHHHhc---CCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 433 333332 223469999999875311100 0000012356677888999999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.50 E-value=5e-14 Score=139.15 Aligned_cols=190 Identities=15% Similarity=0.104 Sum_probs=97.9
Q ss_pred CCCeEEEEEecCCCC----CC--c-------HHHHHH----HHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHh
Q 011679 157 DASYKFGIIGDLGQT----YN--S-------LSTLEH----YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER 219 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~----~~--~-------~~~l~~----i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~ 219 (479)
...+||+++||+|.+ .. . ...+++ +.+.+||+||++||++++.+... ....+.+.+.++.
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~---~~~~~~~~~~l~~ 92 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPS---VVALHDLLDYLKR 92 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCC---HHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCC---HHHHHHHHHHHHH
Confidence 358999999999976 21 1 223333 33459999999999444433221 1112345556666
Q ss_pred hhccCCeEEcCCCcccccccCCCccccccccccc----cccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC-------C
Q 011679 220 SAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHR----YPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF-------V 288 (479)
Q Consensus 220 ~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~-------~ 288 (479)
+...+|+++++||||... ... +..+... +.+-.+. . ......++.+++.|+.++..... .
T Consensus 93 L~~~~pv~~i~GNHD~~~---~~~---~~~~l~~~g~nv~v~~~~-~--~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~ 163 (336)
T 2q8u_A 93 MMRTAPVVVLPGNHDWKG---LKL---FGNFVTSISSDITFVMSF-E--PVDVEAKRGQKVRILPFPYPDESEALRKNEG 163 (336)
T ss_dssp HHHHSCEEECCC---------CHH---HHHHHHHHCSSEEECCSS-S--CEEEECTTSCEEEEEEECCC-------CCSS
T ss_pred HHhcCCEEEECCCCCccc---ccc---HHHHHHhcCCEEEEEecc-c--ccCceEEeCCCEEEEECCCCCHHHHHHHhhH
Confidence 643489999999999853 110 1111110 1110000 0 00001122356888888653321 1
Q ss_pred CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHH-H-HHHHHHHHHHcCccEEEecccccceee
Q 011679 289 KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGES-M-RAAFESWFVRYKVDVVFAGHVHAYERS 361 (479)
Q Consensus 289 ~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~-~-~~~l~~l~~~~~VdlvlsGH~H~y~r~ 361 (479)
...+|++|+.+.|...-.....++|+++|.|+...... +.+. . ...+...+.+.++|++++||+|..+..
T Consensus 164 ~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~---~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~ 235 (336)
T 2q8u_A 164 DFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY---AGIEQGREIIINRALIPSVVDYAALGHIHSFREI 235 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------CCCEECGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCC---CCccchhhcccCHHHccccCCEEEEccccCceEe
Confidence 12467889988886521013458999999998753211 0000 0 000111233468999999999998765
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.36 E-value=8e-11 Score=106.39 Aligned_cols=180 Identities=13% Similarity=0.135 Sum_probs=106.6
Q ss_pred CCCeEEEEEecCCCCCC---cHHHHHHHHH-hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCC
Q 011679 157 DASYKFGIIGDLGQTYN---SLSTLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~---~~~~l~~i~~-~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GN 232 (479)
...+||+++||+|.... ....+..+.+ .++|+|+++||++. ....+.++.+ ..|+++++||
T Consensus 8 ~~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~-------------~~~~~~l~~~--~~~~~~v~GN 72 (192)
T 1z2w_A 8 RDRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-------------KESYDYLKTL--AGDVHIVRGD 72 (192)
T ss_dssp ---CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-------------HHHHHHHHHH--CSEEEECCCT
T ss_pred ccceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC-------------HHHHHHHHhc--CCCEEEEcCC
Confidence 34589999999998532 2333443332 37999999999983 1122333333 2589999999
Q ss_pred cccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeE
Q 011679 233 HEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWL 312 (479)
Q Consensus 233 HD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 312 (479)
||... .+| ....++. ..++
T Consensus 73 hD~~~-----------------~lp---------~~~~~~~-----------------------------------~~~~ 91 (192)
T 1z2w_A 73 FDENL-----------------NYP---------EQKVVTV-----------------------------------GQFK 91 (192)
T ss_dssp TCCCT-----------------TSC---------SEEEEEE-----------------------------------TTEE
T ss_pred cCccc-----------------cCC---------cceEEEE-----------------------------------CCEE
Confidence 99741 111 1111111 1357
Q ss_pred EEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCC
Q 011679 313 IVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGD 392 (479)
Q Consensus 313 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~ 392 (479)
|+++|.+++.... . .+.+..++.+.+++++++||+|...... .+++.+|-.|+
T Consensus 92 i~l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vi~GHtH~~~~~~-------------------~~~~~~inpGS 144 (192)
T 1z2w_A 92 IGLIHGHQVIPWG-----D---MASLALLQRQFDVDILISGHTHKFEAFE-------------------HENKFYINPGS 144 (192)
T ss_dssp EEEECSCCCCBTT-----C---HHHHHHHHHHHSSSEEECCSSCCCEEEE-------------------ETTEEEEECCC
T ss_pred EEEECCCcCCCCC-----C---HHHHHHHHHhcCCCEEEECCcCcCccEe-------------------ECCEEEEECCc
Confidence 8888855443211 1 2345667777899999999999854321 14467777777
Q ss_pred CCCCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCCCceeeeeeEEEEe
Q 011679 393 GGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 453 (479)
Q Consensus 393 gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g~~~~~D~f~i~~ 453 (479)
.+.... | .. .....+|+.+++.+. .+.++++.-..++ +.+.++.+.|
T Consensus 145 ~~~~~~---------~-~~--~~~~~~y~il~~~~~-~~~~~~~~~~~~~-~~v~~~~~~~ 191 (192)
T 1z2w_A 145 ATGAYN---------A-LE--TNIIPSFVLMDIQAS-TVVTYVYQLIGDD-VKVERIEYKK 191 (192)
T ss_dssp TTCCCC---------S-SC--SCCCCEEEEEEEETT-EEEEEEEEEETTE-EEEEEEEEEC
T ss_pred ccccCC---------C-CC--cCCCCcEEEEEEECC-EEEEEEEEccCCE-EEEEEEEEcc
Confidence 654321 0 00 122468999999654 4677777654454 4567766654
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.33 E-value=4.5e-11 Score=110.06 Aligned_cols=186 Identities=15% Similarity=0.180 Sum_probs=107.2
Q ss_pred CeEEEEEecCCCCCC---cHHHHHHHHH-hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcc
Q 011679 159 SYKFGIIGDLGQTYN---SLSTLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHE 234 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~---~~~~l~~i~~-~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD 234 (479)
.+||+++||+|.... ....+.++.+ .++|+|+++||++. ....+.++.+ ..|+++++||||
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~-------------~~~l~~l~~~--~~~v~~V~GNHD 89 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS-------------QEYVEMLKNI--TKNVYIVSGDLD 89 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC-------------HHHHHHHHHH--CSCEEECCCTTC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC-------------HHHHHHHHHc--CCCEEEecCCCc
Confidence 689999999998643 2345555543 48999999999983 1122334433 358999999999
Q ss_pred cccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEE
Q 011679 235 IEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIV 314 (479)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv 314 (479)
...... . ..+.. .+| ....+ + ...++|+
T Consensus 90 ~~~~~~----~--~~~~~--~lp---------~~~~~-------------------------------~----~~~~~i~ 117 (215)
T 2a22_A 90 SAIFNP----D--PESNG--VFP---------EYVVV-------------------------------Q----IGEFKIG 117 (215)
T ss_dssp CSCCBC----C--GGGTB--CCC---------SEEEE-------------------------------E----ETTEEEE
T ss_pred Cccccc----C--hhhHh--hCC---------ceEEE-------------------------------e----cCCeEEE
Confidence 752100 0 00000 000 00000 0 1235788
Q ss_pred EeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCC
Q 011679 315 LMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGG 394 (479)
Q Consensus 315 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG 394 (479)
++|.+++.... . .+.+..++.+.++|++++||+|...... .+++.+|-.|+.+
T Consensus 118 l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vl~GHtH~~~~~~-------------------~~~~~~inpGS~~ 170 (215)
T 2a22_A 118 LMHGNQVLPWD-----D---PGSLEQWQRRLDCDILVTGHTHKLRVFE-------------------KNGKLFLNPGTAT 170 (215)
T ss_dssp EECSTTSSSTT-----C---HHHHHHHHHHHTCSEEEECSSCCCEEEE-------------------ETTEEEEECCCSS
T ss_pred EEcCCccCCCC-----C---HHHHHHHHhhcCCCEEEECCcCCCccEe-------------------eCCEEEEECCccc
Confidence 99965543211 1 2345667777899999999999854321 1346677777765
Q ss_pred CCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCCCceeeeeeEEEE
Q 011679 395 NQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILH 452 (479)
Q Consensus 395 ~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g~~~~~D~f~i~ 452 (479)
..... .+ .....+|+.+++.+. .+.++++.-.++++ .+.+..+.
T Consensus 171 ~~~~~----~~--------~~~~~~y~il~i~~~-~i~~~~~~~~~~~~-~v~~~~~~ 214 (215)
T 2a22_A 171 GAFSA----LT--------PDAPPSFMLMALQGN-KVVLYVYDLRDGKT-NVAMSEFS 214 (215)
T ss_dssp CCCCT----TS--------TTCCCEEEEEEEETT-EEEEEEEEEETTEE-EEEEEEEE
T ss_pred ccCCC----CC--------CCCCCcEEEEEEeCC-cEEEEEEEecCCeE-EEEEEEee
Confidence 43110 00 012468999999654 46677766555553 35555544
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=3.1e-12 Score=122.32 Aligned_cols=204 Identities=13% Similarity=0.079 Sum_probs=106.7
Q ss_pred CCCCeEEEEEecCCCCCCcHHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccc
Q 011679 156 PDASYKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 156 ~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
....+||+++||+|...... .+ .++|+||++||++.... ....+.+.+.++.+. ..|+++++||||+
T Consensus 56 ~~~~mri~~iSD~H~~~~~l----~i--~~~D~vi~aGDl~~~g~------~~e~~~~~~~L~~l~-~~~v~~V~GNHD~ 122 (296)
T 3rl5_A 56 PAGHTRFVCISDTRSRTDGI----QM--PYGDILLHTGDFTELGL------PSEVKKFNDWLGNLP-YEYKIVIAGNHEL 122 (296)
T ss_dssp CTTEEEEEEEBCCTTCCTTC----CC--CSCSEEEECSCCSSSCC------HHHHHHHHHHHHTSC-CSEEEECCCTTCG
T ss_pred CCCCeEEEEEeeCCCCcchh----cc--CCCCEEEECCcccCCCC------HHHHHHHHHHHHhCC-CCeEEEEcCCccc
Confidence 34679999999999876422 11 38999999999996432 122233444444432 2468999999999
Q ss_pred ccccCCCcc---ccccccc----------ccc-ccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCC---ChHHHHHHH
Q 011679 236 EYMTYMGEV---VPFKSYL----------HRY-PTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVK---YTPQWEWLR 298 (479)
Q Consensus 236 ~~~~~~~~~---~~~~~~~----------~~~-~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~---~~~Q~~WL~ 298 (479)
..+...-+. ..+..+. ..+ .++.+... ... -+..++++.|++..-...+.. ..++.+++.
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-L~~--~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~ 199 (296)
T 3rl5_A 123 TFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIY-LQD--SEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLL 199 (296)
T ss_dssp GGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEE-CSS--EEEEETTEEEEEECCBCC--CCTTBCCTTHHHH
T ss_pred ccchhhhhhhhcccccccccccccccchhhhHhhhcCCeEE-ecC--CcEEECCEEEEEecCCCCCCCcCCCcchHHHHH
Confidence 643211000 0000000 000 01100000 011 234567899988543221211 112223444
Q ss_pred HHHhhccCCCCCeEEEEeccccccCCCCccCcC-HHHHHHHHHHH-HHcCccEEEecccccceeeeeccCCcccccCCcc
Q 011679 299 EELKKVDREKTPWLIVLMHVPIYNSNEAHFMEG-ESMRAAFESWF-VRYKVDVVFAGHVHAYERSYRISNLHYNISSGDC 376 (479)
Q Consensus 299 ~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~-~~~~~~l~~l~-~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~ 376 (479)
+.+... .....|+++|.|++.......... ..-.+.|.+.+ ++++++++++||+|.......
T Consensus 200 ~~~~~i---p~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~------------- 263 (296)
T 3rl5_A 200 DKWNLI---PEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMT------------- 263 (296)
T ss_dssp HHHTTS---CTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEE-------------
T ss_pred HHHhhC---CCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEE-------------
Confidence 434433 123469999999987643110000 00113455555 589999999999997533221
Q ss_pred cccCCCCCCeEEEeCCCCCC
Q 011679 377 FPVPDKSAPVYITVGDGGNQ 396 (479)
Q Consensus 377 ~~~~~~~~~~~i~~G~gG~~ 396 (479)
.+++.+|-.|+-|..
T Consensus 264 -----~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 264 -----DGYTTYINASTCTVS 278 (296)
T ss_dssp -----CSSCEEEECBCSCTT
T ss_pred -----ECCEEEEECCcCCcC
Confidence 144677777766543
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=6.2e-11 Score=119.08 Aligned_cols=176 Identities=16% Similarity=0.024 Sum_probs=93.7
Q ss_pred CCCeEEEEEecCCCCCCc----------HHHHHH----HHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc
Q 011679 157 DASYKFGIIGDLGQTYNS----------LSTLEH----YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA 222 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~~----------~~~l~~----i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (479)
...|||+++||+|.+... ..+++. +.+.+||+||++||++...... ...+..+.+.++.+..
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~----~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPP----VKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCC----HHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCC----HHHHHHHHHHHHHHHh
Confidence 468999999999987431 122333 3344899999999998543211 1223445566666654
Q ss_pred -cCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHH---H
Q 011679 223 -YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWL---R 298 (479)
Q Consensus 223 -~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL---~ 298 (479)
.+|+++++||||........ .....+...+..-. ...++..+.+++.+++++...... .....+|| .
T Consensus 94 ~~~pv~~v~GNHD~~~~~~~~--~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~ 164 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLGEE--SPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNFE 164 (386)
T ss_dssp TTCEEEECCCGGGSCSSTTSC--CGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHHH
T ss_pred cCCcEEEEcCCCCCCcccccc--CHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhh
Confidence 58999999999985321100 00000100011000 011221112458888888654321 12233333 3
Q ss_pred HHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccce
Q 011679 299 EELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYE 359 (479)
Q Consensus 299 ~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 359 (479)
..+. ...++|+++|+|+.......+... +. .+ .++|++++||+|..+
T Consensus 165 ~~~~-----~~~~~Ill~H~~~~~~~~~~~~~~------~~-~l--~~~d~v~~GH~H~~~ 211 (386)
T 3av0_A 165 SEAK-----NYKKKILMLHQGINPYIPLDYELE------HF-DL--PKFSYYALGHIHKRI 211 (386)
T ss_dssp HHHH-----TCSSEEEEECCCCTTTSSSSCSSC------GG-GS--CCCSEEEECSCCSCE
T ss_pred hhcc-----cCCCEEEEECcCccccCCCCcccC------HH-Hh--hhCCeEEccCCCCCc
Confidence 3222 234689999999853211111000 01 11 139999999999874
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.26 E-value=8.3e-12 Score=117.84 Aligned_cols=188 Identities=9% Similarity=-0.037 Sum_probs=99.5
Q ss_pred eEEEEEecCCCCCCcH-HHHHHHH---Hh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCc
Q 011679 160 YKFGIIGDLGQTYNSL-STLEHYM---ES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~-~~l~~i~---~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 233 (479)
+||+++||+|...... ..++.+. +. ++|+||++||++..... . ....+.+..+....|+++++|||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~-----~---~~~~~~l~~l~~~~~~~~v~GNh 73 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY-----P---KEVIEVIKDLTKKENVKIIRGKY 73 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC-----H---HHHHHHHHHHHHHSCEEEECCHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCC-----H---HHHHHHHHhhHhhcCeeEEecch
Confidence 6899999999764332 3345555 55 79999999999954221 0 22334444444336899999999
Q ss_pred ccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEE
Q 011679 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLI 313 (479)
Q Consensus 234 D~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~I 313 (479)
|........... .+... .. +++.......+. ........+|++||++........-....|
T Consensus 74 D~~~~~~~~~~~---~~~~~--~~-------------~~~~~~~~~~~~-~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i 134 (252)
T 1nnw_A 74 DQIIAMSDPHAT---DPGYI--DK-------------LELPGHVKKALK-FTWEKLGHEGREYLRDLPIYLVDKIGGNEV 134 (252)
T ss_dssp HHHHHHSCTTCS---SSGGG--GG-------------SSCCHHHHHHHH-HHHHHHHHHHHHHHHTSCSCEEEEETTEEE
T ss_pred HHHhhccccccC---Ccccc--cc-------------hhhhHHHHHHHH-HHHHHCCHHHHHHHHhCCceEEEeeCCcEE
Confidence 985321000000 00000 00 000000000000 000012357888987633221101123478
Q ss_pred EEeccccccCC-CCccCcCHHHHHHHHHHHHHc-CccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeC
Q 011679 314 VLMHVPIYNSN-EAHFMEGESMRAAFESWFVRY-KVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVG 391 (479)
Q Consensus 314 v~~H~P~~~~~-~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G 391 (479)
+++|++++... ....... ..+.+..++.++ +++++|+||+|...... . +++.+|..|
T Consensus 135 ~~~H~~p~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~-~------------------~~~~~in~G 193 (252)
T 1nnw_A 135 FGVYGSPINPFDGEVLAEQ--PTSYYEAIMRPVKDYEMLIVASPMYPVDAM-T------------------RYGRVVCPG 193 (252)
T ss_dssp EEESSCSSCTTTCCCCSSC--CHHHHHHHHGGGTTSSEEEESTTCSEEEEE-E------------------TTEEEEEEC
T ss_pred EEEcCCCCCCcccccCCCC--CHHHHHHHHhcCCCCCEEEECCccccceEe-c------------------CCeEEEECC
Confidence 88998874322 1111111 124567788888 99999999999854332 1 346778888
Q ss_pred CCCC
Q 011679 392 DGGN 395 (479)
Q Consensus 392 ~gG~ 395 (479)
+.|.
T Consensus 194 s~~~ 197 (252)
T 1nnw_A 194 SVGF 197 (252)
T ss_dssp CSSS
T ss_pred CccC
Confidence 7764
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.26 E-value=4.5e-10 Score=99.94 Aligned_cols=159 Identities=13% Similarity=0.116 Sum_probs=98.3
Q ss_pred CCeEEEEEecCCCCCCcHHHHHHHHHh---CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcc
Q 011679 158 ASYKFGIIGDLGQTYNSLSTLEHYMES---GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHE 234 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~~~~l~~i~~~---~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD 234 (479)
..+|++++||+|.. ...++++.+. ++|+|+++||+.+. .++.+.. |++++.||||
T Consensus 5 ~~m~i~~isD~H~~---~~~~~~~~~~~~~~~d~i~~~GD~~~~-----------------~l~~l~~--~~~~v~GNhD 62 (176)
T 3ck2_A 5 AKQTIIVMSDSHGD---SLIVEEVRDRYVGKVDAVFHNGDSELR-----------------PDSPLWE--GIRVVKGNMD 62 (176)
T ss_dssp CCEEEEEECCCTTC---HHHHHHHHHHHTTTSSEEEECSCCCSC-----------------TTCGGGT--TEEECCCTTC
T ss_pred cCcEEEEEecCCCC---HHHHHHHHHHhhcCCCEEEECCCCchH-----------------HHHhhhC--CeEEecCccc
Confidence 35899999999964 2333333322 79999999997421 0122222 8999999999
Q ss_pred cccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEE
Q 011679 235 IEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIV 314 (479)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv 314 (479)
... .+|. ...+. . ..++|+
T Consensus 63 ~~~-----------------~~p~---------~~~~~-------------------------------~----~~~~i~ 81 (176)
T 3ck2_A 63 FYA-----------------GYPE---------RLVTE-------------------------------L----GSTKII 81 (176)
T ss_dssp CST-----------------TCCS---------EEEEE-------------------------------E----TTEEEE
T ss_pred chh-----------------cCCc---------EEEEE-------------------------------E----CCeEEE
Confidence 741 0120 00000 0 125789
Q ss_pred EeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCC
Q 011679 315 LMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGG 394 (479)
Q Consensus 315 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG 394 (479)
++|.|++.... .. +.+.+++.+++++++++||+|...... .+++.+|..|+.|
T Consensus 82 ~~Hg~~~~~~~----~~----~~l~~~~~~~~~d~vi~GHtH~~~~~~-------------------~~~~~~inpGs~~ 134 (176)
T 3ck2_A 82 QTHGHLFDINF----NF----QKLDYWAQEEEAAICLYGHLHVPSAWL-------------------EGKILFLNPGSIS 134 (176)
T ss_dssp EECSGGGTTTT----CS----HHHHHHHHHTTCSEEECCSSCCEEEEE-------------------ETTEEEEEECCSS
T ss_pred EECCCccCCCC----CH----HHHHHHHHhcCCCEEEECCcCCCCcEE-------------------ECCEEEEECCCCC
Confidence 99998875321 11 345667778999999999999864422 1346677777765
Q ss_pred CCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCCCce
Q 011679 395 NQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKK 443 (479)
Q Consensus 395 ~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g~~ 443 (479)
.... . ....+|+.+++.+ ..+.+++++- +|+.
T Consensus 135 ~~~~-------~--------~~~~~y~il~~~~-~~~~v~~~~~-~~~~ 166 (176)
T 3ck2_A 135 QPRG-------T--------IRECLYARVEIDD-SYFKVDFLTR-DHEV 166 (176)
T ss_dssp SCCT-------T--------CCSCCEEEEEECS-SEEEEEEECT-TSCB
T ss_pred cCCC-------C--------CCCCeEEEEEEcC-CEEEEEEEEE-CCEE
Confidence 4310 0 1125799999954 4567787764 5654
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=4.9e-11 Score=113.70 Aligned_cols=220 Identities=14% Similarity=0.112 Sum_probs=117.2
Q ss_pred CCCeEEEEEecCCCCCCcH-HHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccc
Q 011679 157 DASYKFGIIGDLGQTYNSL-STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~~~-~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
..+.|++++||+|.+.... ..++.+.+.++|.|+++||++..... .....+.++. ..|++++.||||.
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~--------~~~~~~~l~~---~~~~~~v~GNhD~ 77 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTG--------RRRILDLLDQ---LPITARVLGNWED 77 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSC--------SHHHHHHHHT---SCEEEECCCHHHH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCC--------HHHHHHHHHc---cCCEEEEcCChHH
Confidence 4689999999999764322 23444555589999999999964221 1223333333 2478999999998
Q ss_pred ccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 011679 236 EYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVL 315 (479)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 315 (479)
.......... .+..|. ..+. .. .+ .........+|++||++.-......-....|++
T Consensus 78 ~~~~~~~~~~-------~~~~~~-------~~~~----~~----~~-~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~l 134 (270)
T 3qfm_A 78 SLWHGVRKEL-------DSTRPS-------QRYL----LR----QC-QYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGI 134 (270)
T ss_dssp HHHHHHTTCS-------CTTSHH-------HHHH----HH----HH-HHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEE
T ss_pred HHHHhhcccc-------CCCcHH-------HHHH----HH----HH-HHHHHHcCHHHHHHHHhCCCceEEEECCcEEEE
Confidence 5311000000 000000 0000 00 00 000112457899999764332211112346888
Q ss_pred eccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCC
Q 011679 316 MHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGN 395 (479)
Q Consensus 316 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~ 395 (479)
+|..+..... ++.......+.+..++.+.++|++|+||+|...... ..++..+|-.|+.|.
T Consensus 135 vHg~p~~~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~------------------~~~~~~~iNpGSvg~ 195 (270)
T 3qfm_A 135 SHHLPDKNWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY------------------GTGGQLIVNPGSIGQ 195 (270)
T ss_dssp ESSBTTBSSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE------------------CTTSCEEEEECCSSS
T ss_pred EECCCCCCCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCchHhee------------------ccCCEEEEECCCccC
Confidence 8876543211 110011113456677778899999999999643221 024578888999886
Q ss_pred CCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEc
Q 011679 396 QEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRN 438 (479)
Q Consensus 396 ~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~ 438 (479)
+... .+.+. .+..-.|+.|++.+.....++|.+.
T Consensus 196 pr~~-----~~~~~----~~~~asyaild~~~~~~~~v~~~rv 229 (270)
T 3qfm_A 196 PFFL-----DAQLR----KDLRAQYMILEFDDKGLVDMDFRRV 229 (270)
T ss_dssp CCCS-----STTGG----GCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCC-----Ccccc----CCCCCEEEEEEecCCCceEEEEEEe
Confidence 5321 11000 0123579999996554456777664
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.23 E-value=5.4e-11 Score=119.16 Aligned_cols=189 Identities=15% Similarity=0.130 Sum_probs=100.4
Q ss_pred eEEEEEecCCCCCC----c---------HHHHHHH----HHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc
Q 011679 160 YKFGIIGDLGQTYN----S---------LSTLEHY----MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA 222 (479)
Q Consensus 160 ~~f~~~gD~~~~~~----~---------~~~l~~i----~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (479)
|||+++||+|.+.. . ...++.+ .+.+||+||++||++.+..... ...+..+.+.++.+..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~---~~~~~~~~~~l~~l~~ 77 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPS---VVALHDLLDYLKRMMR 77 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCC---HHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCC---HHHHHHHHHHHHHHHh
Confidence 68999999998754 1 1233333 3449999999999994322221 1223455566666654
Q ss_pred cCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEE--eC-CEEEEEEcCCCCCC----CChHHHH
Q 011679 223 YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIR--RA-SAHIIVLSSYSPFV----KYTPQWE 295 (479)
Q Consensus 223 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~--~g-~~~fi~Ldt~~~~~----~~~~Q~~ 295 (479)
.+|+++++||||..... .+...... ++.+........-+.+. .| .+.|+.+.-..... ...++.+
T Consensus 78 ~~~v~~i~GNHD~~~~~------~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~ 149 (379)
T 3tho_B 78 TAPVVVLPGNQDWKGLK------LFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRF 149 (379)
T ss_dssp HSCEEECCCTTSCTTHH------HHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHH
T ss_pred CCCEEEEcCCCccccCc------cccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHH
Confidence 48999999999953110 00000000 11000000000112222 23 46777765422211 1356788
Q ss_pred HHHHHHhhc---cCCCCCeEEEEeccccccCCCCccCcCHH-HHHHHHHHHHHcCccEEEecccccceee
Q 011679 296 WLREELKKV---DREKTPWLIVLMHVPIYNSNEAHFMEGES-MRAAFESWFVRYKVDVVFAGHVHAYERS 361 (479)
Q Consensus 296 WL~~~L~~~---~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~-~~~~l~~l~~~~~VdlvlsGH~H~y~r~ 361 (479)
|+.+.|+.. ......+.|+++|.++...... .+.+. +...+...+...++|++++||+|..+..
T Consensus 150 ~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~--~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 150 FLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY--AGIEQGREIIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEeccccCCccC--CCCccccccccCHHHcCcCCCEEEcccccCCeEe
Confidence 999888721 0124567899999988643220 00000 0011111222468999999999998654
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.11 E-value=3.7e-10 Score=106.14 Aligned_cols=151 Identities=15% Similarity=0.200 Sum_probs=84.8
Q ss_pred CCeEEEEEecCCCCCCcHHHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccc
Q 011679 158 ASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~~~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
..+|++++||+|... ..+..+.+. ++|.++++||++..... -....+.+..+ .+++++.||||.
T Consensus 2 ~~mri~~isDiHg~~---~~l~~~l~~~~~~d~ii~~GDl~~~g~~--------~~~~~~~l~~~---~~~~~v~GNhD~ 67 (246)
T 3rqz_A 2 NAMRILIISDVHANL---VALEAVLSDAGRVDDIWSLGDIVGYGPR--------PRECVELVRVL---APNISVIGNHDW 67 (246)
T ss_dssp CCCCEEEECCCTTCH---HHHHHHHHHHCSCSEEEECSCCSSSSSC--------HHHHHHHHHHH---CSSEECCCHHHH
T ss_pred CCcEEEEEeecCCCH---HHHHHHHHhccCCCEEEECCCcCCCCCC--------HHHHHHHHHhc---CCCEEEeCchHH
Confidence 368999999999643 333333332 89999999999954221 12233333333 236899999998
Q ss_pred ccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 011679 236 EYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVL 315 (479)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 315 (479)
........ ..+. +.. .....| .......++++||++...... .. .|++
T Consensus 68 ~~~~~~~~--------~~~~-~~~---~~~~~~----------------~~~~l~~~~~~~L~~lp~~~~--~~--~i~~ 115 (246)
T 3rqz_A 68 ACIGRLSL--------DEFN-PVA---RFASYW----------------TTMQLQAEHLQYLESLPNRMI--DG--DWTV 115 (246)
T ss_dssp HHTCCCCC--------C--C-GGG---GCHHHH----------------HHHHCCHHHHHHHHHCCSEEE--ET--TEEE
T ss_pred HHhccCCc--------cccC-HHH---HHHHHH----------------HHHHcCHHHHHHHHhCCcEEE--EC--CEEE
Confidence 53211000 0000 000 000000 001235688999986433321 11 4778
Q ss_pred eccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccc
Q 011679 316 MHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAY 358 (479)
Q Consensus 316 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y 358 (479)
+|.++..... .+... ...+.+++++++++++||||+|..
T Consensus 116 ~Hg~p~~~~~-~~~~~---~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 116 VHGSPRHPIW-EYIYN---ARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp ESSCSSSTTT-CCCCS---HHHHHHHGGGCCSSEEECCSSSSE
T ss_pred EECCcCCccc-cccCC---hHHHHHHHhccCCCEEEECCcCcc
Confidence 8987765321 11111 245677888999999999999974
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.07 E-value=7.1e-10 Score=99.86 Aligned_cols=63 Identities=22% Similarity=0.248 Sum_probs=42.1
Q ss_pred CeEEEEEecCCCCCCc-HHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 159 SYKFGIIGDLGQTYNS-LSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~-~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
.+||+++||+|..... .+.++.+.+.++|+|+++||++.. ...+.++.+ ..|+++++||||..
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-------------~~~~~l~~l--~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-------------FVIKEFENL--NANIIATYGNNDGE 88 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-------------HHHHHGGGC--SSEEEEECCTTCCC
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-------------HHHHHHHhc--CCCEEEEeCCCcch
Confidence 3999999999954322 223344444589999999999731 122223222 47999999999975
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.06 E-value=7.5e-09 Score=92.09 Aligned_cols=63 Identities=16% Similarity=0.111 Sum_probs=42.2
Q ss_pred CCeEEEEEecCCCCCC---cHHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcc
Q 011679 158 ASYKFGIIGDLGQTYN---SLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHE 234 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~---~~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD 234 (479)
..+|++++||+|...+ ..+.++.+. .++|+|+++||++.. ...+.++.+ ..|++++.||||
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-------------~~~~~l~~~--~~~v~~V~GNhD 84 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-------------DTVILLEKF--SKEFYGVHGNMD 84 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-------------HHHHHHHHH--TSSEEECCCSSS
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-------------HHHHHHHhc--CCCEEEEECCCC
Confidence 3489999999995222 223344433 589999999999841 122333333 259999999999
Q ss_pred cc
Q 011679 235 IE 236 (479)
Q Consensus 235 ~~ 236 (479)
..
T Consensus 85 ~~ 86 (178)
T 2kkn_A 85 YP 86 (178)
T ss_dssp CG
T ss_pred cH
Confidence 74
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.03 E-value=6.1e-10 Score=100.80 Aligned_cols=136 Identities=17% Similarity=0.227 Sum_probs=82.9
Q ss_pred eEEEEEecCCCCCCcH----------HH----HHHHHH--hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhcc
Q 011679 160 YKFGIIGDLGQTYNSL----------ST----LEHYME--SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY 223 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~----------~~----l~~i~~--~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (479)
++++++||+|.+.... .. ++.+.+ .++|+|+++||++... . + +....+.++.+.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~-~---~----~~~~~~~l~~l~-- 71 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF-N---D----KNEYLRIWKALP-- 71 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS-C---C----TTSHHHHHHHSS--
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc-h---h----HHHHHHHHHHCC--
Confidence 6899999999764321 11 223333 2799999999999642 1 1 123444555542
Q ss_pred CCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhh
Q 011679 224 QPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303 (479)
Q Consensus 224 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 303 (479)
.|+++++||||.... .+...|. . +. +..||+ +
T Consensus 72 ~~~~~v~GNhD~~~~----------~~~~~~~--------------~----------l~----------~~~~l~----~ 103 (195)
T 1xm7_A 72 GRKILVMGNHDKDKE----------SLKEYFD--------------E----------IY----------DFYKII----E 103 (195)
T ss_dssp SEEEEECCTTCCCHH----------HHTTTCS--------------E----------EE----------SSEEEE----E
T ss_pred CCEEEEeCCCCCchh----------hhhhhhh--------------c----------hh----------HHHHHH----h
Confidence 489999999997421 1111110 0 00 111221 1
Q ss_pred ccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEeccccccee
Q 011679 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYER 360 (479)
Q Consensus 304 ~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 360 (479)
. ..++|+++|+|++......+ ....+.+.+++.+++++++|+||+|....
T Consensus 104 ~----~~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 104 H----KGKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp E----TTEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred c----CCcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 1 23579999999876543221 23356788889999999999999998644
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.7e-08 Score=100.08 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=50.8
Q ss_pred CCCCeEEEEEecCCCCCCc---------HHHH----HHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhh--
Q 011679 156 PDASYKFGIIGDLGQTYNS---------LSTL----EHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS-- 220 (479)
Q Consensus 156 ~~~~~~f~~~gD~~~~~~~---------~~~l----~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-- 220 (479)
....+||++++|+|.+... ...+ +.+.+.+||+||++||++...... ......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~----~~~~~~~~~~L~r~~~ 104 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPS----RKTLHTCLELLRKYCM 104 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCC----HHHHHHHHHHHHHHHB
T ss_pred CCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCC----HHHHHHHHHHHHHHhc
Confidence 3468999999999987431 1233 334445999999999998653321 12223334444432
Q ss_pred --------------------------------hccCCeEEcCCCcccc
Q 011679 221 --------------------------------AAYQPWIWSAGNHEIE 236 (479)
Q Consensus 221 --------------------------------~~~~P~~~v~GNHD~~ 236 (479)
...+|++++.||||..
T Consensus 105 ~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 105 GDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp CSSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred cCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 2368999999999975
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.6e-08 Score=101.27 Aligned_cols=248 Identities=14% Similarity=0.081 Sum_probs=119.4
Q ss_pred CCCeEEEEEecCCCCCC---------cHHH----HHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHh----
Q 011679 157 DASYKFGIIGDLGQTYN---------SLST----LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER---- 219 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~---------~~~~----l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~---- 219 (479)
...+||++++|+|.+.. ...+ ++.+.+.+||+||++||++....... .....+.+.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~----~~~~~~~~~lr~~~~g 86 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSR----KALYQALRSLRLNCLG 86 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCH----HHHHHHHHHHHHHHBS
T ss_pred CCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCH----HHHHHHHHHHHHhccc
Confidence 46899999999998743 1223 33444559999999999986433211 111222233322
Q ss_pred --------h----------------------hccCCeEEcCCCcccccccCCCcccc-c--cccccccccCcCCCCCCCC
Q 011679 220 --------S----------------------AAYQPWIWSAGNHEIEYMTYMGEVVP-F--KSYLHRYPTPHLASKSSSP 266 (479)
Q Consensus 220 --------~----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~-~--~~~~~~~~~p~~~~~~~~~ 266 (479)
+ ...+|++++.||||............ + ......+... ...++
T Consensus 87 ~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~----~~~~~ 162 (417)
T 4fbw_A 87 DKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRV----PENDN 162 (417)
T ss_dssp SCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCC----C---C
T ss_pred CCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCc----ccCCc
Confidence 1 13689999999999853211000000 0 0000111100 00001
Q ss_pred c---EEEEEeCC--EEEEEEcCCCCCCCChHHH-HHHHHHHhh-cc---CCCCCeEEEEeccccccCCCCccCcCHHHHH
Q 011679 267 L---WYAIRRAS--AHIIVLSSYSPFVKYTPQW-EWLREELKK-VD---REKTPWLIVLMHVPIYNSNEAHFMEGESMRA 336 (479)
Q Consensus 267 ~---yysf~~g~--~~fi~Ldt~~~~~~~~~Q~-~WL~~~L~~-~~---~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~ 336 (479)
. -..+..|+ +.+.++.-. ..+.+ .++.+.... .. .....+.|++.|..........+..
T Consensus 163 i~~~pv~l~~g~~~valyG~~~~-----~d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yip------ 231 (417)
T 4fbw_A 163 IVVSPILLQKGFTKLALYGISNV-----RDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLP------ 231 (417)
T ss_dssp EEECCEEEEETTEEEEEEEECCC-----CHHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSSCC------
T ss_pred eeEEeEEEEecCceEEEEeccCC-----chhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCcccCc------
Confidence 0 01233443 445554321 11111 233222221 11 1234578999999775432211111
Q ss_pred HHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCccceeec
Q 011679 337 AFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREA 416 (479)
Q Consensus 337 ~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p~~~~~~~~ 416 (479)
.-+...++|+|+.||+|..+...... ..+++..+-.|+.... . .+.-...
T Consensus 232 ---~~l~~~~~DyvalGH~H~~~~~~~~~---------------~~~g~~i~~PGS~~~~-----s-------~~e~E~~ 281 (417)
T 4fbw_A 232 ---ESFIQDFYDFVLWGHEHECLIDGSYN---------------PTQKFTVVQPGSTIAT-----S-------LSPGETA 281 (417)
T ss_dssp ---GGGSCTTCSEEEEESCCSCEEEEEEE---------------TTTTEEEEECCCSSCS-----S-------CCHHHHS
T ss_pred ---hhHhhcCCCEEEecCccccceecccc---------------CCCCEEEEECCCCCcC-----C-------CccccCC
Confidence 12345689999999999876542110 0123333444443211 0 1100113
Q ss_pred cccEEEEEEecccEEEEEEEEcCCCceeeeeeEEEEec
Q 011679 417 SYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQ 454 (479)
Q Consensus 417 ~~Gf~~l~v~~~t~~~~~~~~~~~g~~~~~D~f~i~~~ 454 (479)
..||..|++.+. .+.++++.-..-...+..++.+...
T Consensus 282 ~kg~~lvei~~~-~~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 282 PKHCGILNITGK-DFHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp CCEEEEEEEETT-EEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred CCEEEEEEEECC-EEEEEEEECCCcccEEEEEEEeecc
Confidence 568999999654 4677777644323344566666543
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=3.5e-08 Score=99.60 Aligned_cols=44 Identities=20% Similarity=0.291 Sum_probs=32.2
Q ss_pred CCCeEEEEEecCCCCCCc---------HHH----HHHHHHhCCCEEEEcCcccccCc
Q 011679 157 DASYKFGIIGDLGQTYNS---------LST----LEHYMESGAQTVLFLGDLSYADR 200 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~~---------~~~----l~~i~~~~pd~vl~~GD~~y~~~ 200 (479)
...+||++++|+|.+... ... ++.+.+.+||+||++||++....
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ 130 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNK 130 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSS
T ss_pred CCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCC
Confidence 468999999999987431 222 34444559999999999986543
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.92 E-value=4.3e-09 Score=103.44 Aligned_cols=73 Identities=19% Similarity=0.233 Sum_probs=49.8
Q ss_pred eEEEEEecCCCCCCc----------HHHH----HHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-cC
Q 011679 160 YKFGIIGDLGQTYNS----------LSTL----EHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQ 224 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~----------~~~l----~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 224 (479)
|||+++||+|.+... ...+ +.+.+.+||+||++||++...... ......+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~----~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPS----PGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCC----HHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCC----HHHHHHHHHHHHHHHHCCC
Confidence 689999999997532 1223 333345999999999998643211 1223445566666654 68
Q ss_pred CeEEcCCCcccc
Q 011679 225 PWIWSAGNHEIE 236 (479)
Q Consensus 225 P~~~v~GNHD~~ 236 (479)
|+++++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999985
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.72 E-value=4.6e-08 Score=102.64 Aligned_cols=175 Identities=17% Similarity=0.127 Sum_probs=93.1
Q ss_pred CCCeEEEEEecCCCCCC--------------cHHH----HHHHHHhCCC-EEEEcCcccccCcccccccchhhhHHHHHH
Q 011679 157 DASYKFGIIGDLGQTYN--------------SLST----LEHYMESGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFV 217 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~--------------~~~~----l~~i~~~~pd-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~ 217 (479)
...++|++++|+|.... .... ++++.+.+|| ++|.+||++....... ....+...+.+
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~---~~~~~~~~~~l 103 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFN---QYRGLADRYFM 103 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHH---HHTTHHHHHHH
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHH---HhCCcHHHHHH
Confidence 35799999999996421 1122 3445555787 8899999996432110 00112222333
Q ss_pred HhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCC-----C-----CCCCcEEEEEeCC--EEEEEEcCCC
Q 011679 218 ERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS-----K-----SSSPLWYAIRRAS--AHIIVLSSYS 285 (479)
Q Consensus 218 ~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~-----~-----~~~~~yysf~~g~--~~fi~Ldt~~ 285 (479)
..+ -+-++++||||++... ..+..+.+...+|.-.. . .....|..++.++ +-|+.+.+..
T Consensus 104 n~l---g~d~~~lGNHEfd~g~-----~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~ 175 (552)
T 2z1a_A 104 HRL---RYRAMALGNHEFDLGP-----GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPD 175 (552)
T ss_dssp HHT---TCCEEECCGGGGTTCH-----HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTT
T ss_pred Hhc---CCCccccccccccCCH-----HHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccc
Confidence 332 3457899999996421 01111111111111110 0 0123566778876 5666666532
Q ss_pred ------CC-C----CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEec
Q 011679 286 ------PF-V----KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAG 353 (479)
Q Consensus 286 ------~~-~----~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsG 353 (479)
+. + ...++.+.+.+.|++ .+...+|+++|.|.... ..+.++ .+||++|+|
T Consensus 176 ~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlgG 237 (552)
T 2z1a_A 176 TREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVGG 237 (552)
T ss_dssp HHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEEC
T ss_pred hhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEeC
Confidence 00 0 111334444445554 34667999999986320 123333 589999999
Q ss_pred cccccee
Q 011679 354 HVHAYER 360 (479)
Q Consensus 354 H~H~y~r 360 (479)
|+|....
T Consensus 238 HtH~~~~ 244 (552)
T 2z1a_A 238 HSHTLLG 244 (552)
T ss_dssp SSCCCBS
T ss_pred CcCcccc
Confidence 9998654
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.71 E-value=3.2e-08 Score=103.12 Aligned_cols=186 Identities=15% Similarity=0.098 Sum_probs=92.8
Q ss_pred CCeEEEEEecCCCCCCc-------H----HHHHHHHHh----CC-CEEEEcCcccccCcccccccchhhhHHHHHHHhhh
Q 011679 158 ASYKFGIIGDLGQTYNS-------L----STLEHYMES----GA-QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA 221 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~-------~----~~l~~i~~~----~p-d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 221 (479)
..++|++++|+|..... . ..++++.+. ++ +++|.+||++..... .+ -...+...+.+..+
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~--~~-~~~~~~~~~~ln~l- 82 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE--SD-LQDAEPDFRGMNLV- 82 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHH--HH-TTTTHHHHHHHHHH-
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcch--hh-hcCCcHHHHHHhcc-
Confidence 47999999999986321 1 223444332 36 799999999843211 10 01112233344443
Q ss_pred ccCCeEEcCCCcccccccCCCccccccccccccccCcCCC-------C-CCCCcEEEEEeCC--EEEEEEcCCCC--CC-
Q 011679 222 AYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS-------K-SSSPLWYAIRRAS--AHIIVLSSYSP--FV- 288 (479)
Q Consensus 222 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~-------~-~~~~~yysf~~g~--~~fi~Ldt~~~--~~- 288 (479)
-+-++++||||+..... .+........+|.-.. + ...+.|..++.++ +-|+.+.+... +.
T Consensus 83 --g~d~~~~GNHEfd~g~~-----~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~ 155 (516)
T 1hp1_A 83 --GYDAMAIGNHEFDNPLT-----VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN 155 (516)
T ss_dssp --TCCEEECCGGGGSSCHH-----HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSS
T ss_pred --CCCEEeeccccccCCHH-----HHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccC
Confidence 24578899999963210 0111111111111100 0 0123466677876 56666765321 11
Q ss_pred C----------ChHH-HHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEeccccc
Q 011679 289 K----------YTPQ-WEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHA 357 (479)
Q Consensus 289 ~----------~~~Q-~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~ 357 (479)
. ..+. .+|++ .|++. .+...+|+++|.|........ ........+...+...+||++|+||.|.
T Consensus 156 p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~~--~~~~~~~~la~~~~~~~iDlilgGHtH~ 230 (516)
T 1hp1_A 156 PEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEHG--SNAPGDVEMARALPAGSLAMIVGGHSQD 230 (516)
T ss_dssp CCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCCT--TSCCCHHHHHHHSCTTSSSEEECCSSCC
T ss_pred cCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCccc--ccCchHHHHHHhCCCCceeEEECCCCCc
Confidence 0 0122 33333 34431 246789999999985432110 0000012233333345699999999998
Q ss_pred ce
Q 011679 358 YE 359 (479)
Q Consensus 358 y~ 359 (479)
..
T Consensus 231 ~~ 232 (516)
T 1hp1_A 231 PV 232 (516)
T ss_dssp BC
T ss_pred cc
Confidence 54
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.57 E-value=5.6e-07 Score=93.89 Aligned_cols=192 Identities=18% Similarity=0.162 Sum_probs=91.5
Q ss_pred CCCeEEEEEecCCCCCC-------------cHHH----HHHHHHhCCC-EEEEcCcccccCcccccccchhh-hHHHHHH
Q 011679 157 DASYKFGIIGDLGQTYN-------------SLST----LEHYMESGAQ-TVLFLGDLSYADRYQFIDVGVRW-DSWGRFV 217 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~-------------~~~~----l~~i~~~~pd-~vl~~GD~~y~~~~~~~~~~~~~-~~~~~~~ 217 (479)
...++|++++|+|.... .... ++++.+..++ ++|..||++...... .+-... ......+
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~--~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFC--NYLIAHSGSSQPLV 94 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHH--HHHHHTTCSSHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHH--HHHhhcccCcchHH
Confidence 46899999999996531 1222 3344444566 778899999543210 000000 0012223
Q ss_pred HhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCC-------CCCCCcEEEEEeCC--EEEEEEcCCCC--
Q 011679 218 ERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS-------KSSSPLWYAIRRAS--AHIIVLSSYSP-- 286 (479)
Q Consensus 218 ~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~-------~~~~~~yysf~~g~--~~fi~Ldt~~~-- 286 (479)
+.+..--+-++++||||++.... .+..+.....+|.-.+ ......|..++.++ +-||.+.+...
T Consensus 95 ~~ln~lg~D~~t~GNHefd~G~~-----~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~ 169 (527)
T 3qfk_A 95 DFYNRMAFDFGTLGNHEFNYGLP-----YLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPH 169 (527)
T ss_dssp HHHHHTCCCEECCCGGGGTTCHH-----HHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGG
T ss_pred HHHHhcCCcEEeccccccccCHH-----HHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCccc
Confidence 33322223467899999864210 0111111111111110 00123467778887 55666655321
Q ss_pred CCC--------ChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCc------cCcCHHHHHHHHHHHHHcCccEEEe
Q 011679 287 FVK--------YTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAH------FMEGESMRAAFESWFVRYKVDVVFA 352 (479)
Q Consensus 287 ~~~--------~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~------~~~~~~~~~~l~~l~~~~~Vdlvls 352 (479)
+.. .....+.+++.+++.+ .++..+|+++|.+.-...... ..+.. ..++..-+ ..+||++|+
T Consensus 170 ~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~--~~~la~~~-~~giDlIlg 245 (527)
T 3qfk_A 170 WEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE--GYAMLEAF-SKDIDIFIT 245 (527)
T ss_dssp TSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC--HHHHHHHH-GGGCSEEEC
T ss_pred ccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH--HHHHHHhc-CCCCcEEEE
Confidence 110 1123344444444432 346779999998764321100 01111 11222222 258999999
Q ss_pred cccccce
Q 011679 353 GHVHAYE 359 (479)
Q Consensus 353 GH~H~y~ 359 (479)
||+|...
T Consensus 246 GHtH~~~ 252 (527)
T 3qfk_A 246 GHQHRQI 252 (527)
T ss_dssp CSSCCEE
T ss_pred CCCCccc
Confidence 9999864
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=5e-07 Score=95.21 Aligned_cols=177 Identities=16% Similarity=0.129 Sum_probs=91.3
Q ss_pred CCCeEEEEEecCCCCCCc------------------HHH----HHHHHHhCCC-EEEEcCcccccCcccccccchhhhHH
Q 011679 157 DASYKFGIIGDLGQTYNS------------------LST----LEHYMESGAQ-TVLFLGDLSYADRYQFIDVGVRWDSW 213 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~~------------------~~~----l~~i~~~~pd-~vl~~GD~~y~~~~~~~~~~~~~~~~ 213 (479)
...++|++++|+|..... ... ++++.+..++ ++|..||++....... ....+..
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~---~~~g~~~ 86 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFT---LFGGSAD 86 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHH---TTTTHHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeee---ecCCHHH
Confidence 357999999999965321 222 3444444666 8899999996432110 0111222
Q ss_pred HHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCC------C----CCCCcEEEEEeCC--EEEEEE
Q 011679 214 GRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS------K----SSSPLWYAIRRAS--AHIIVL 281 (479)
Q Consensus 214 ~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~------~----~~~~~yysf~~g~--~~fi~L 281 (479)
.+.+..+ -+-++++||||++... ..+..+.....+|.-.. + .....|..++.++ +-||.+
T Consensus 87 ~~~ln~l---g~D~~tlGNHEfd~G~-----~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~ 158 (579)
T 3ztv_A 87 AAVMNAG---NFHYFTLGNHEFDAGN-----EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGL 158 (579)
T ss_dssp HHHHHHH---TCSEEECCSGGGTTHH-----HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEE
T ss_pred HHHHHhc---CcCeeeccccccccCH-----HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEE
Confidence 2333332 2346789999986421 01111111112221100 0 0112466777887 556677
Q ss_pred cC-C------CCCC--CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEE
Q 011679 282 SS-Y------SPFV--KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVF 351 (479)
Q Consensus 282 dt-~------~~~~--~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~Vdlvl 351 (479)
.+ . .+.. ......+-+++.+++.+....+.+|+++|.+... .. .+.++ .+||++|
T Consensus 159 t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~---~la~~~~giDlIl 223 (579)
T 3ztv_A 159 DTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NI---EIAQKVNDIDVIV 223 (579)
T ss_dssp ECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HH---HHHHHCSSCCEEE
T ss_pred EcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hH---HHHHhCCCCCEEE
Confidence 43 1 1110 0112334444444443324567799999976421 01 12222 4799999
Q ss_pred ecccccce
Q 011679 352 AGHVHAYE 359 (479)
Q Consensus 352 sGH~H~y~ 359 (479)
+||+|...
T Consensus 224 gGHtH~~~ 231 (579)
T 3ztv_A 224 TGDSHYLY 231 (579)
T ss_dssp ECSSCCEE
T ss_pred eCCCCccc
Confidence 99999865
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=4.2e-07 Score=95.16 Aligned_cols=177 Identities=15% Similarity=0.114 Sum_probs=91.2
Q ss_pred CCCeEEEEEecCCCCCC-----------------cHHH----HHHHHHhCC-CEEEEcCcccccCcccccccchhhhHHH
Q 011679 157 DASYKFGIIGDLGQTYN-----------------SLST----LEHYMESGA-QTVLFLGDLSYADRYQFIDVGVRWDSWG 214 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~-----------------~~~~----l~~i~~~~p-d~vl~~GD~~y~~~~~~~~~~~~~~~~~ 214 (479)
...++|++++|+|.... .... ++++.+..| +++|.+||++....... ....+...
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~---~~~g~~~~ 99 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFT---VYKGAEVA 99 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHH---HHTTHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhh---hhCChHHH
Confidence 35799999999996421 1222 344444466 59999999996432110 01112222
Q ss_pred HHHHhhhccCCeEEcCCCcccccccCCCcccccc-ccccccccCcCCCC---C---------CCCcEEEEEeCCE--EEE
Q 011679 215 RFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFK-SYLHRYPTPHLASK---S---------SSPLWYAIRRASA--HII 279 (479)
Q Consensus 215 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~-~~~~~~~~p~~~~~---~---------~~~~yysf~~g~~--~fi 279 (479)
+.+..+ -+-++++||||+..... .+. .+.....+|.-... . ....|..++.+++ -||
T Consensus 100 ~~ln~l---g~d~~~~GNHEfd~g~~-----~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgii 171 (546)
T 4h2g_A 100 HFMNAL---RYDAMALGNHEFDNGVE-----GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIV 171 (546)
T ss_dssp HHHHHH---TCSEEECCGGGGTTHHH-----HHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEE
T ss_pred HHHHhc---CCcEEeccCcccccCHH-----HHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEE
Confidence 333332 23467899999864211 011 12122222211110 0 1235677788875 456
Q ss_pred EEcCCC------CC-C-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEE
Q 011679 280 VLSSYS------PF-V-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVV 350 (479)
Q Consensus 280 ~Ldt~~------~~-~-~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~Vdlv 350 (479)
.+.+.. +. + ...+..+.+++.+++.+...+..+|+++|.+... ... +.++ .+||++
T Consensus 172 G~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~------------d~~---la~~~~giDlI 236 (546)
T 4h2g_A 172 GYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM------------DKL---IAQKVRGVDVV 236 (546)
T ss_dssp EEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH------------HHH---HHHHSTTCCEE
T ss_pred EecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc------------hHH---HHHhCCCCcEE
Confidence 665421 10 0 0112334444444433224467899999987531 011 2222 479999
Q ss_pred Eecccccce
Q 011679 351 FAGHVHAYE 359 (479)
Q Consensus 351 lsGH~H~y~ 359 (479)
|+||+|...
T Consensus 237 lgGHtH~~~ 245 (546)
T 4h2g_A 237 VGGHSNTFL 245 (546)
T ss_dssp ECCSSCCCC
T ss_pred EeCCcCccc
Confidence 999999853
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.43 E-value=2e-06 Score=90.17 Aligned_cols=144 Identities=15% Similarity=0.092 Sum_probs=73.6
Q ss_pred CC-EEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCC---
Q 011679 186 AQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS--- 261 (479)
Q Consensus 186 pd-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~--- 261 (479)
|| ++|.+||++...... . ....+...+.+..+ ..+++ + ||||+.... ..+..+...+.+|.-.+
T Consensus 123 pd~Lll~~GD~~~gs~~~--~-~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~-----~~l~~~l~~~~~p~L~aNv~ 190 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGLS--L-LTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGR-----ERVEELLGLFRGEFLSYNIV 190 (562)
T ss_dssp CCEEEEECSCCSSSSHHH--H-HHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCH-----HHHHHHHHHCCSEECCSSCE
T ss_pred CCEEEEeCCCCCCcchhh--h-hhCCHHHHHHHHhh--CCcEE-e-cchhcccCH-----HHHHHHHHhCCCCEEEEEEE
Confidence 88 899999999643210 0 00112233444443 35655 7 999986421 01111111122221110
Q ss_pred -----CCCCCcEEEEEeCC--EEEEEEcCCC-----------C--CCCChHHHHHHHHHHhhccCCCCCeEEEEeccccc
Q 011679 262 -----KSSSPLWYAIRRAS--AHIIVLSSYS-----------P--FVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIY 321 (479)
Q Consensus 262 -----~~~~~~yysf~~g~--~~fi~Ldt~~-----------~--~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~ 321 (479)
......|..++.++ +-+|.+.+.. . +....+..+-+.+.|++ .....+|+++|.|..
T Consensus 191 ~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~~ 267 (562)
T 2wdc_A 191 DDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGMQ 267 (562)
T ss_dssp ETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCHH
T ss_pred ecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCCc
Confidence 00123466677877 5666665421 0 11112333333334443 356789999999863
Q ss_pred cCCCCccCcCHHHHHHHHHHHHH-cCccEEEecccccce
Q 011679 322 NSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHVHAYE 359 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 359 (479)
. . ..+.++ .+||++|+||+|...
T Consensus 268 ~---------d------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 268 L---------D------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp H---------H------HHHHTTSSSCCEEEECSSCCCC
T ss_pred c---------h------HHHHhcCCCCcEEEeCCCCCCC
Confidence 1 0 123334 589999999999853
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=1.7e-06 Score=89.85 Aligned_cols=186 Identities=12% Similarity=0.081 Sum_probs=91.7
Q ss_pred CCeEEEEEecCCCCCC---------------cHHH----HHHHHHhCCCEEEE-cCcccccCcccccccchhhhHHHHHH
Q 011679 158 ASYKFGIIGDLGQTYN---------------SLST----LEHYMESGAQTVLF-LGDLSYADRYQFIDVGVRWDSWGRFV 217 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~---------------~~~~----l~~i~~~~pd~vl~-~GD~~y~~~~~~~~~~~~~~~~~~~~ 217 (479)
..++|++++|+|.... .... ++++.+.+++.+++ +||++...... . .......+
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~--~----~~~g~~~~ 78 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYIS--S----LTKGKAII 78 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHH--H----TTTTHHHH
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhh--h----hcCChHHH
Confidence 4699999999996421 1222 34444557887766 99998632111 0 01112233
Q ss_pred HhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCC---------CCCCCCcEEEEEeCC--EEEEEEcCCC-
Q 011679 218 ERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLA---------SKSSSPLWYAIRRAS--AHIIVLSSYS- 285 (479)
Q Consensus 218 ~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~~~yysf~~g~--~~fi~Ldt~~- 285 (479)
+.+..--+-++++||||+++... .+..+.....+|.-. .......|..++.++ +-||.+-+..
T Consensus 79 ~~ln~lg~D~~tlGNHEfd~G~~-----~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~ 153 (509)
T 3ive_A 79 DIMNTMPFDAVTIGNHEFDHGWD-----NTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFA 153 (509)
T ss_dssp HHHTTSCCSEECCCGGGGTTCHH-----HHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHH
T ss_pred HHHHhcCCcEEeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcc
Confidence 43433335577899999864210 011111111111110 000023466778887 4566663210
Q ss_pred ----CC-----C-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCcc----CcCHHHHHHHHHHHHH-cCccEE
Q 011679 286 ----PF-----V-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHF----MEGESMRAAFESWFVR-YKVDVV 350 (479)
Q Consensus 286 ----~~-----~-~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~----~~~~~~~~~l~~l~~~-~~Vdlv 350 (479)
.+ + ......+.+++.+++.+.. +..+|+++|.+.-....... ....... ..+.++ .+||++
T Consensus 154 ~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDlI 229 (509)
T 3ive_A 154 FNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDIL 229 (509)
T ss_dssp HHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCEE
T ss_pred cccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcEE
Confidence 00 0 1123344455555544323 77899999987532211000 0001111 122333 479999
Q ss_pred Eecccccc
Q 011679 351 FAGHVHAY 358 (479)
Q Consensus 351 lsGH~H~y 358 (479)
|+||.|..
T Consensus 230 lgGHtH~~ 237 (509)
T 3ive_A 230 ITGHAHVG 237 (509)
T ss_dssp EEESSCCC
T ss_pred EeCCcCcc
Confidence 99999963
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.26 E-value=1.6e-05 Score=75.04 Aligned_cols=175 Identities=17% Similarity=0.099 Sum_probs=90.9
Q ss_pred CCeEEEEEecCCCCCCc---HHHHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCc
Q 011679 158 ASYKFGIIGDLGQTYNS---LSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~---~~~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 233 (479)
..+||+++||.+...+. ...+.++.+. ++|+++..||.+.... .. .....+.+..+ .+ =..+.|||
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~-g~------~~~~~~~ln~~--G~-Da~TlGNH 72 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGK-GL------SLKHYEFLKEA--GV-NYITMGNH 72 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTS-SC------CHHHHHHHHHH--TC-CEEECCTT
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-Cc------CHHHHHHHHhc--CC-CEEEEccC
Confidence 36899999999855321 1234555554 7899999999986431 11 12222333332 22 24578999
Q ss_pred ccccccCCCccccccc---cccccccCcCCCCC-CCCcEEEEEeCCE--EEEEEcCCCCCC--CChHHHHHHHHHHhhcc
Q 011679 234 EIEYMTYMGEVVPFKS---YLHRYPTPHLASKS-SSPLWYAIRRASA--HIIVLSSYSPFV--KYTPQWEWLREELKKVD 305 (479)
Q Consensus 234 D~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~-~~~~yysf~~g~~--~fi~Ldt~~~~~--~~~~Q~~WL~~~L~~~~ 305 (479)
|+++.. +...|-. ...--++|...... ....|..++.++. -+|.|-+...+. ....-.+.+++.++
T Consensus 73 efD~g~---~~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~--- 146 (281)
T 1t71_A 73 TWFQKL---DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL--- 146 (281)
T ss_dssp TTCCGG---GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---
T ss_pred cccCCc---cHHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---
Confidence 997531 1100000 00001122211000 1235777888774 455554432122 12223445555555
Q ss_pred CCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEeccccccee
Q 011679 306 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYER 360 (479)
Q Consensus 306 ~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 360 (479)
+.+.+.+|+.+|.-. ....+.+.. .-..+||+++.||+|....
T Consensus 147 ~~~~diIIv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t~ 189 (281)
T 1t71_A 147 KRDCDLHIVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPSA 189 (281)
T ss_dssp TCCCSEEEEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCCT
T ss_pred hcCCCEEEEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 256788999999421 111122222 1234699999999998643
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.03 E-value=3.6e-05 Score=80.36 Aligned_cols=193 Identities=13% Similarity=0.152 Sum_probs=93.3
Q ss_pred ECCCCCC-CCCCeEEEEEecCCCCCCc-------------HHHH----HHHH-HhCCC-EEEEcCcccccCcccccccch
Q 011679 149 QTPPKID-PDASYKFGIIGDLGQTYNS-------------LSTL----EHYM-ESGAQ-TVLFLGDLSYADRYQFIDVGV 208 (479)
Q Consensus 149 ~T~p~~~-~~~~~~f~~~gD~~~~~~~-------------~~~l----~~i~-~~~pd-~vl~~GD~~y~~~~~~~~~~~ 208 (479)
-++|... ....++|++++|+|..... ...+ +++. +.+++ ++|.+||++......... ..
T Consensus 4 ~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~-~~ 82 (557)
T 3c9f_A 4 ASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDIT-SP 82 (557)
T ss_dssp -CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSS-SS
T ss_pred ccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhc-cc
Confidence 3444432 2368999999999985310 2222 2222 23677 579999999543211100 00
Q ss_pred hhhHHHHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCCC-----------CCCCcEEEEEe--CC
Q 011679 209 RWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASK-----------SSSPLWYAIRR--AS 275 (479)
Q Consensus 209 ~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~-----------~~~~~yysf~~--g~ 275 (479)
+.+...+.+..+ -.=++++||||++.... ....+........+|.-.+. .....|..++. ++
T Consensus 83 ~g~~~~~~ln~l---g~Da~tlGNHEfD~G~~--~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G 157 (557)
T 3c9f_A 83 NGLKSTPIFIKQ---DYDLLTIGNHELYLWEN--SKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRG 157 (557)
T ss_dssp TTTTTHHHHTTS---CCSEECCCGGGSSSHHH--HHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTC
T ss_pred CCHHHHHHHHhc---CCCEEeecchhcccchH--HHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCC
Confidence 122223333332 23467899999964311 00011111111222221110 01234667777 66
Q ss_pred --EEEEEEcCCCCCC-----C-ChH---HHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH
Q 011679 276 --AHIIVLSSYSPFV-----K-YTP---QWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR 344 (479)
Q Consensus 276 --~~fi~Ldt~~~~~-----~-~~~---Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~ 344 (479)
+-||.+.+...-. . ... +.+|+++.++ .++..+|+++|.+..... .+ . ......+.+
T Consensus 158 ~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~------d~-~-~~~~~~lA~ 225 (557)
T 3c9f_A 158 IRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW------GE-F-YQVHQYLRQ 225 (557)
T ss_dssp CEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT------CH-H-HHHHHHHHH
T ss_pred EEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC------cc-c-cHHHHHHHH
Confidence 4555555431100 0 111 1246655442 457789999998863101 01 1 122233333
Q ss_pred --cCccE-EEecccccce
Q 011679 345 --YKVDV-VFAGHVHAYE 359 (479)
Q Consensus 345 --~~Vdl-vlsGH~H~y~ 359 (479)
.++|+ +|+||.|...
T Consensus 226 ~~~giDilIlgGHtH~~~ 243 (557)
T 3c9f_A 226 FFPDTIIQYFGGHSHIRD 243 (557)
T ss_dssp HCTTSEEEEEECSSCCEE
T ss_pred hCCCCCEEEECCCCCCCC
Confidence 58994 9999999863
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.02 E-value=6.9e-05 Score=69.49 Aligned_cols=168 Identities=14% Similarity=0.146 Sum_probs=86.7
Q ss_pred eEEEEEecCCCCCCc---HHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNS---LSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~---~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
+|++++||.=...+. ...+.++.+.. |++|..|....... .. . +...+.+..+ .+-+ .+.||||++
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~-g~---~---~~~~~~l~~~--G~D~-~T~GNHefD 69 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGK-GL---D---RRSYRLLREA--GVDL-VSLGNHAWD 69 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTS-SC---C---HHHHHHHHHH--TCCE-EECCTTTTS
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCC-Cc---C---HHHHHHHHhC--CCCE-EEeccEeeE
Confidence 689999998543322 22344454446 99988887775422 11 1 2222223322 3344 478999997
Q ss_pred cccCCCcccccccccccc--ccCcCCC-CCCCCcEEEEEeCCEEEEEEc--CCCCCCCChHHHHHHHHHHhhccCCCCCe
Q 011679 237 YMTYMGEVVPFKSYLHRY--PTPHLAS-KSSSPLWYAIRRASAHIIVLS--SYSPFVKYTPQWEWLREELKKVDREKTPW 311 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~--~~p~~~~-~~~~~~yysf~~g~~~fi~Ld--t~~~~~~~~~Q~~WL~~~L~~~~~~~~~w 311 (479)
.. +. ..|.... -.|.+-+ ......|..++.++..+-+++ ..........-.+-+++.+++.+ .+.
T Consensus 70 ~~----~l---~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~ 139 (252)
T 2z06_A 70 HK----EV---YALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADY 139 (252)
T ss_dssp CT----TH---HHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSE
T ss_pred Cc----hH---HHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCE
Confidence 42 11 1121111 1122211 111356778888886655544 32211112223344566666642 778
Q ss_pred EEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEeccccccee
Q 011679 312 LIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYER 360 (479)
Q Consensus 312 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 360 (479)
+|+.+|.-. ....+.+. ..-..+||+|+.||+|....
T Consensus 140 IIv~~H~g~-----------tsek~~la-~~~dg~Vd~VvGgHTHv~t~ 176 (252)
T 2z06_A 140 VLVEVHAEA-----------TSEKMALA-HYLDGRASAVLGTHTHVPTL 176 (252)
T ss_dssp EEEEEECSC-----------HHHHHHHH-HHHBTTBSEEEEESSCSCBS
T ss_pred EEEEeCCCc-----------HHHHHHHH-HhCCCCeEEEEcCCCCcCCC
Confidence 999999522 11111222 22234699999999998543
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.01 E-value=4.7e-05 Score=74.49 Aligned_cols=48 Identities=21% Similarity=0.264 Sum_probs=28.0
Q ss_pred CCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccc
Q 011679 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAY 358 (479)
Q Consensus 307 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y 358 (479)
..+..+|+++|...-........+.. ...|..-+ .+||++|.||.|..
T Consensus 206 ~g~D~II~l~H~G~~~d~~~~~~e~~--~~~lA~~v--~giD~IigGHsH~~ 253 (341)
T 3gve_A 206 EGADVIIALAHTGIEKQAQSSGAENA--VFDLATKT--KGIDAIISGHQHGL 253 (341)
T ss_dssp TTCSEEEEEECCCCCSSCCCTTCSSC--HHHHHHHC--SCCCEEEECSSCCE
T ss_pred cCCCEEEEEeccCccccccccccchh--HHHHHhcC--CCCcEEEECCCCcc
Confidence 45788999999876432211111111 11122111 58999999999985
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=97.89 E-value=1.8e-05 Score=71.97 Aligned_cols=74 Identities=20% Similarity=0.201 Sum_probs=46.6
Q ss_pred CeEEEEEecCCCCCCcH-HHHHHHHHhCCCEEEEcCcccccCcccccccchhh--hHHHHHHHhhhccCCeEEcCCCccc
Q 011679 159 SYKFGIIGDLGQTYNSL-STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRW--DSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~-~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
.+|++++||+|...... +.++.+.+.++|+|+++||++....... ....| ....+.++.+ ..|++++.||||.
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~--~~~~~~~~~~~~~l~~~--~~~v~~V~GNHD~ 100 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNA--LPEGYAPAKVVERLNEV--AHKVIAVRGNCDS 100 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSC--CCTTBCHHHHHHHHHTT--GGGEEECCCTTCC
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccc--cccccCHHHHHHHHHhc--CCceEEEECCCch
Confidence 48999999999754322 2334444458999999999996422110 01111 2333444443 2589999999997
Q ss_pred c
Q 011679 236 E 236 (479)
Q Consensus 236 ~ 236 (479)
.
T Consensus 101 ~ 101 (208)
T 1su1_A 101 E 101 (208)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00037 Score=67.98 Aligned_cols=47 Identities=19% Similarity=0.269 Sum_probs=27.7
Q ss_pred CCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEecccccce
Q 011679 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHVHAYE 359 (479)
Q Consensus 307 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 359 (479)
..+..+|+++|...-........+... . ++.+ .+||++|.||.|...
T Consensus 200 ~g~D~II~l~H~G~~~d~~~~~~en~~---~---~~~~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 200 KGADVVVVVAHSGLSADPYQAMAENSV---Y---YLSQVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp TTCSEEEEEECCCCCCSCCCTTCSCCH---H---HHTTSTTCCEEEECSSCSEE
T ss_pred cCCCEEEEEeccCccccccccccchhH---H---HHhhCCCCCEEEeCCCcccc
Confidence 457889999998763211100011111 0 1222 589999999999853
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00021 Score=66.56 Aligned_cols=170 Identities=14% Similarity=0.057 Sum_probs=86.0
Q ss_pred eEEEEEecCCCCCCcHHH----HHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccc
Q 011679 160 YKFGIIGDLGQTYNSLST----LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~----l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
+|++++||.=.... ... +.++.+.. |++|..|+.+..... . . ....+.+..+ .+- ..+.||||+
T Consensus 1 m~ilf~GDv~g~~G-~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g-~---~---~~~~~~l~~~--G~D-a~TlGNHef 68 (255)
T 1t70_A 1 MRVLFIGDVFGQPG-RRVLQNHLPTIRPQF-DFVIVNMENSAGGFG-M---H---RDAARGALEA--GAG-CLTLGNHAW 68 (255)
T ss_dssp CEEEEECCBBHHHH-HHHHHHHHHHHGGGC-SEEEEECTBTTTTSS-C---C---HHHHHHHHHH--TCS-EEECCTTTT
T ss_pred CEEEEEeccCChHH-HHHHHHHHHHHHhhC-CEEEECCCCccCCcC-C---C---HHHHHHHHhC--CCC-EEEeccccc
Confidence 58999999853322 223 33444445 999999888864311 1 1 1222223322 233 356799999
Q ss_pred ccccCCCcccccccccc-ccccCcCCC--CCCCCcEEEEEeCCEE--EEEEcCCCCCCCChHHHHHHHHHHhhccCCCCC
Q 011679 236 EYMTYMGEVVPFKSYLH-RYPTPHLAS--KSSSPLWYAIRRASAH--IIVLSSYSPFVKYTPQWEWLREELKKVDREKTP 310 (479)
Q Consensus 236 ~~~~~~~~~~~~~~~~~-~~~~p~~~~--~~~~~~yysf~~g~~~--fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 310 (479)
+.. +...+-.-.. +.-.|.+-+ ......|.-++.++.+ +|.|-+.........-.+-+++.+++. +.+
T Consensus 69 D~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d 141 (255)
T 1t70_A 69 HHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLG 141 (255)
T ss_dssp SST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCC
T ss_pred cCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCC
Confidence 742 1111100001 000122211 1123467778887744 455544321112233344566666654 467
Q ss_pred eEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEeccccccee
Q 011679 311 WLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYER 360 (479)
Q Consensus 311 w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r 360 (479)
.+|+.+|.- .....+.+.. .-..+||+++.||+|....
T Consensus 142 ~IIv~~H~e-----------~t~Ek~~la~-~~dg~vd~VvGgHTHv~~~ 179 (255)
T 1t70_A 142 TVFVDFHAE-----------ATSEKEAMGW-HLAGRVAAVIGTHTHVPTA 179 (255)
T ss_dssp EEEEEEECS-----------CHHHHHHHHH-HHTTSSSEEEEESSCSCBS
T ss_pred EEEEEeCCC-----------ChHHHHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 899999941 1111122222 2234699999999998644
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00034 Score=72.81 Aligned_cols=173 Identities=16% Similarity=0.114 Sum_probs=86.6
Q ss_pred CeEEEEEecCCCCCC-----------------cHHH----HHHHHHhCCC-EEEEcCcccccCcccccccchhhhHHHHH
Q 011679 159 SYKFGIIGDLGQTYN-----------------SLST----LEHYMESGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRF 216 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~-----------------~~~~----l~~i~~~~pd-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~ 216 (479)
.++|+..+|+|.... .... ++++.+.+++ ++|..||++....... ..+.+...+.
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~---~~~g~~~i~~ 79 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFT---VYKGAEVAHF 79 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHH---HHTTHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHH---HhCChHHHHH
Confidence 478999999996421 1222 3444444565 6788999996432110 0111222222
Q ss_pred HHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcCCC------------CCCCCcEEEEEeCCE--EEEEEc
Q 011679 217 VERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS------------KSSSPLWYAIRRASA--HIIVLS 282 (479)
Q Consensus 217 ~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~------------~~~~~~yysf~~g~~--~fi~Ld 282 (479)
+..+ -.=.+++||||+.+.... . ...+......|.-.+ ...-..|.-++.+++ -||.+-
T Consensus 80 mN~l---gyDa~~lGNHEFd~G~~~--l--~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGlt 152 (530)
T 4h1s_A 80 MNAL---RYDAMALGNHEFDNGVEG--L--IEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYT 152 (530)
T ss_dssp HHHT---TCCEEECCGGGGTTTTHH--H--HTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEE
T ss_pred Hhcc---CCCEEEEchhhhccCHHH--H--HHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeecccc
Confidence 3322 223678999999753210 0 001111111221111 011234777788875 456665
Q ss_pred CCC------CC-----CCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEE
Q 011679 283 SYS------PF-----VKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVV 350 (479)
Q Consensus 283 t~~------~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~Vdlv 350 (479)
+.. .. ...-+..+...++|++ .++.-+|+++|...- ... .+.++ .+||++
T Consensus 153 t~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~------------~d~---~la~~v~giD~I 214 (530)
T 4h1s_A 153 SKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE------------MDK---LIAQKVRGVDVV 214 (530)
T ss_dssp CTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH------------HHH---HHHHHSTTCCEE
T ss_pred ccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch------------HHH---HHHhcCCCCCee
Confidence 421 10 0112233333344554 457779999996431 111 12233 479999
Q ss_pred Eecccccce
Q 011679 351 FAGHVHAYE 359 (479)
Q Consensus 351 lsGH~H~y~ 359 (479)
|.||+|.+-
T Consensus 215 lgGHsH~~~ 223 (530)
T 4h1s_A 215 VGGHSNTFL 223 (530)
T ss_dssp ECCSSCCCB
T ss_pred ccCCcccee
Confidence 999999753
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.002 Score=51.62 Aligned_cols=89 Identities=26% Similarity=0.427 Sum_probs=56.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCC--ceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKF--DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+.......+++.|+|....... .-.|+|....+.. .... ... ..-...+.|++|+|+|
T Consensus 11 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t 80 (114)
T 2ede_A 11 APKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIM----ETI------SGDRLTHQIMDLNLDT 80 (114)
T ss_dssp CCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEE----EEE------ETTCCEEEECSCCSSC
T ss_pred CCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEE----EEE------CCCceEEEEcCCCCCC
Confidence 5777777654334589999999874332 2356776543321 1111 010 1123357889999999
Q ss_pred EEEEEeCC------CCCceeEEEECCCCCCC
Q 011679 132 KYYYKIGS------GDSSREFWFQTPPKIDP 156 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~p~~~~ 156 (479)
.|.+||.+ +.+|....|+|.+.+..
T Consensus 81 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 81 MYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp EEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 99999943 35788889999876654
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00025 Score=64.85 Aligned_cols=67 Identities=21% Similarity=0.218 Sum_probs=42.2
Q ss_pred CCeEEEEEecCCCCCCcHH-HHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccc
Q 011679 158 ASYKFGIIGDLGQTYNSLS-TLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~~~-~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
..++++++||+|....... .++.+... ++|.+|++||++...... .+.++.+. ..+++++.||||.
T Consensus 11 ~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~-----------~~~~~~l~-~~~~~~v~GNhd~ 78 (221)
T 1g5b_A 11 KYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAEN-----------VECLELIT-FPWFRAVRGNHEQ 78 (221)
T ss_dssp GCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCH-----------HHHHGGGG-STTEEECCCHHHH
T ss_pred CCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCCh-----------HHHHHHHh-cCCEEEEccCcHH
Confidence 3578999999996532222 22222222 689999999999643210 12233332 3589999999997
Q ss_pred c
Q 011679 236 E 236 (479)
Q Consensus 236 ~ 236 (479)
.
T Consensus 79 ~ 79 (221)
T 1g5b_A 79 M 79 (221)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0041 Score=50.92 Aligned_cols=82 Identities=21% Similarity=0.136 Sum_probs=53.8
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCCC--------CCEEEEeecCCCC--ceEEEeEEEEEeeecceeceEEEEEeCC
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG--------PSTVSYGTSADKF--DFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~l~g 126 (479)
..|..+++..-. .+++.|+|....... .-.|+|....... ...+.. ....+.|+|
T Consensus 20 ~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~-------------~~~~~~v~g 84 (123)
T 2edd_A 20 LPPVGVQAVALT--HDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT-------------TSLSYTATG 84 (123)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE-------------SSSEEEEES
T ss_pred CCCcceEEEEcC--CCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeC-------------CceEEEecC
Confidence 357777776543 589999999653222 3467787653211 111110 123578999
Q ss_pred CCCCCEEEEEeCC------CCCceeEEEECCCC
Q 011679 127 LEYDTKYYYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 127 L~p~t~Y~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
|+|+|.|.++|.. +.+|....|+|.+.
T Consensus 85 L~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 85 LKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp CCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 9999999999843 35788889999876
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00037 Score=66.13 Aligned_cols=64 Identities=23% Similarity=0.282 Sum_probs=40.7
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHHh-----CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcc
Q 011679 160 YKFGIIGDLGQTYNSLSTLEHYMES-----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHE 234 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~l~~i~~~-----~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD 234 (479)
|+++++||+|... ..+..+.+. ++|.+|++||++...... ....+.+..+ ..+++.+.||||
T Consensus 1 M~i~vigDiHG~~---~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s--------~~~l~~l~~l--~~~~~~v~GNHe 67 (280)
T 2dfj_A 1 MATYLIGDVHGCY---DELIALLHKVEFTPGKDTLWLTGDLVARGPGS--------LDVLRYVKSL--GDSVRLVLGNHD 67 (280)
T ss_dssp -CEEEECCCCSCH---HHHHHHHHHTTCCTTTCEEEECSCCSSSSSCH--------HHHHHHHHHT--GGGEEECCCHHH
T ss_pred CeEEEEecCCCCH---HHHHHHHHHhCCCCCCCEEEEeCCcCCCCCcc--------HHHHHHHHhC--CCceEEEECCCc
Confidence 5789999999754 333333332 579999999999643211 1222333333 237999999999
Q ss_pred cc
Q 011679 235 IE 236 (479)
Q Consensus 235 ~~ 236 (479)
..
T Consensus 68 ~~ 69 (280)
T 2dfj_A 68 LH 69 (280)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00045 Score=64.93 Aligned_cols=63 Identities=22% Similarity=0.269 Sum_probs=40.2
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHHh----CC-CEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCc
Q 011679 159 SYKFGIIGDLGQTYNSLSTLEHYMES----GA-QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~~~l~~i~~~----~p-d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 233 (479)
..+++++||+|... ..+..+.+. .+ |.+|++||++..... . ....+.+.. .+++++.|||
T Consensus 18 ~~~i~visDiHg~~---~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~------~--~~~l~~l~~----~~~~~v~GNH 82 (262)
T 2qjc_A 18 TGRVIIVGDIHGCR---AQLEDLLRAVSFKQGSDTLVAVGDLVNKGPD------S--FGVVRLLKR----LGAYSVLGNH 82 (262)
T ss_dssp CSCEEEECCCTTCH---HHHHHHHHHHTCCTTTSEEEECSCCSSSSSC------H--HHHHHHHHH----HTCEECCCHH
T ss_pred CCeEEEEeCCCCCH---HHHHHHHHHHhccCCCCEEEEecCCCCCCCC------H--HHHHHHHHH----CCCEEEeCcC
Confidence 34899999999543 334443332 44 999999999964221 0 112222222 4799999999
Q ss_pred ccc
Q 011679 234 EIE 236 (479)
Q Consensus 234 D~~ 236 (479)
|..
T Consensus 83 d~~ 85 (262)
T 2qjc_A 83 DAK 85 (262)
T ss_dssp HHH
T ss_pred hHH
Confidence 975
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0052 Score=48.67 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=51.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+.......+++.|+|.-...... -.|+|....+....... .. ...+.|++|+|+|.|
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~--~~~~~l~~L~p~t~Y 76 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQR-----------AA--SNFTEIKNLLVNTLY 76 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEE-----------ES--SSEEEECSCCSSCEE
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEec-----------CC--ccEEEeCCCCCCCEE
Confidence 57777665432245799999998753332 24566655443222211 01 125788999999999
Q ss_pred EEEeCC------CCCceeEEEECCC
Q 011679 134 YYKIGS------GDSSREFWFQTPP 152 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p 152 (479)
.+||.+ +.+|....++|.+
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 77 TVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEECCCceeCCCCCEEEECCC
Confidence 999954 2467788888854
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0028 Score=50.20 Aligned_cols=81 Identities=20% Similarity=0.317 Sum_probs=48.9
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
|..+.+... ..+++.|.|......+. -.|+|....+.......+ ....+.|+||+|+|.|.
T Consensus 11 P~~~~~~~~--s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~v~~L~p~t~Y~ 75 (106)
T 1x4x_A 11 CKPPQVTCR--SATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-------------PGLSYEIKGLSPATTYY 75 (106)
T ss_dssp CCCCCCEEE--ETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-------------SCSEEEEESCCSSCEEE
T ss_pred CCCCEEEEc--CCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-------------CcceEEEcCCCCCCEEE
Confidence 444444432 24799999987653222 256665443221111111 11246789999999999
Q ss_pred EEeCC------CCCceeEEEECCCCC
Q 011679 135 YKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 135 Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
+||.. +.+|+...++|.+.+
T Consensus 76 frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 76 CRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred EEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 99943 356888899997654
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0041 Score=49.44 Aligned_cols=86 Identities=16% Similarity=0.310 Sum_probs=52.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+.. ...+++.|.|....... .-.|+|............ .. .-...+.|++|+|++.|
T Consensus 13 ~P~~l~~~~--~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y 79 (111)
T 1x5l_A 13 QVVVIRQER--AGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----LK------AVTTRATVSGLKPGTRY 79 (111)
T ss_dssp CCCCEECSC--BCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----EE------ESSSEEEECSCCTTCEE
T ss_pred CCceEEEEE--cCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEE-----ec------CCCCEEEEcCCCCCCEE
Confidence 355555443 24579999998764332 235677665422111100 00 01235678999999999
Q ss_pred EEEeCC------CCCceeEEEECCCCCCC
Q 011679 134 YYKIGS------GDSSREFWFQTPPKIDP 156 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p~~~~ 156 (479)
.+||.+ +.+|....|+|.+.+++
T Consensus 80 ~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 80 VFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 999953 35788899999876543
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0099 Score=47.58 Aligned_cols=88 Identities=13% Similarity=0.148 Sum_probs=52.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--CC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--PG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+... ..+++.|+|.-... .. .-.|+|............. ... . .-...+.|++|+|+|
T Consensus 11 ~P~~~~~~~~--~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~--~~~-----~-~~~~~~~i~~L~p~t 80 (114)
T 1x4y_A 11 GPYITFTDAV--NETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKK--DMV-----E-GDRYWHSISHLQPET 80 (114)
T ss_dssp CCEEEEEECS--SSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCC--EEE-----E-TTCCEEEECSCCTTC
T ss_pred CCeEEEEEec--CCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceee--Eec-----C-CcEeEEEcCCCCCCC
Confidence 4666666543 35899999997741 11 1356675544321000000 000 0 111347899999999
Q ss_pred EEEEEeCC------CCCceeEEEECCCCCC
Q 011679 132 KYYYKIGS------GDSSREFWFQTPPKID 155 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~p~~~ 155 (479)
.|.+||.+ +.+|....++|.+.+.
T Consensus 81 ~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 81 SYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp EEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred EEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 99999843 3578888999987654
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0067 Score=47.88 Aligned_cols=84 Identities=14% Similarity=0.233 Sum_probs=50.6
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCCCC-----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEPGP-----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~~~-----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
|..+.+.... .+ +.|+|.-....+. -.|+|........... ..... ...-...+.|+||+|+|.|
T Consensus 10 P~~~~~~~~~--~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~---~~~~~----~~~~~~~~~i~~L~p~t~Y 79 (105)
T 2haz_A 10 PSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK---WYDAK----EASMEGIVTIVGLKPETTY 79 (105)
T ss_dssp CEEEEEEECS--SC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE---EEEHH----HHHHHSEEEECSCCTTCEE
T ss_pred CCCCEEEEcC--Cc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccc---eEEcc----ccCCccEEEECCCCCCCEE
Confidence 6666655432 35 9999997743322 2577766554322111 00000 0011235678999999999
Q ss_pred EEEeCC------CCCceeEEEECCC
Q 011679 134 YYKIGS------GDSSREFWFQTPP 152 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p 152 (479)
.+||.+ +..|+...|+|.|
T Consensus 80 ~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 80 AVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEcCCccCCCcCCEeeEEec
Confidence 999953 4568888999986
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0047 Score=49.74 Aligned_cols=84 Identities=20% Similarity=0.139 Sum_probs=52.2
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCCC--------CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCC
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG--------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~ 128 (479)
.+|..+++..-. .+++.|+|....... .-.|+|.......... ... ..-...+.|+||+
T Consensus 10 ~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~-----~~~------~~~~~~~~i~gL~ 76 (113)
T 1x5j_A 10 MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKY-----KNA------NATTLSYLVTGLK 76 (113)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCC-----EEC------CBCSSEEEEESCC
T ss_pred CCCcceEEEEec--CCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEE-----EEE------ecCcCEEEeCCCC
Confidence 358888776543 589999998764221 2356676532111100 000 0112357889999
Q ss_pred CCCEEEEEeCC------CCCceeEEEECCCC
Q 011679 129 YDTKYYYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 129 p~t~Y~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
|+|.|.++|.. +.+|....++|.+.
T Consensus 77 P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 77 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 99999999843 35788888888765
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.01 Score=47.83 Aligned_cols=85 Identities=20% Similarity=0.310 Sum_probs=53.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCC-CCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPH-EPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~-~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+.+... ..+++.|.|.... .... -.|+|....+....... . ...-...+.|+||+|+|.
T Consensus 20 ~P~~l~~~~~--~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~ 87 (120)
T 1x5f_A 20 APRDVVASLV--STRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN----T------SHPGEMQVTIQNLMPATV 87 (120)
T ss_dssp CCEEEEEEEE--CSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE----C------SSTTCSEEEECSCCTTCE
T ss_pred CCCCcEEEec--CCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEE----e------ccCCccEEEeCCCCCCCE
Confidence 5777776654 3578999999865 3222 35777665432221110 0 011234578899999999
Q ss_pred EEEEeCC------CCCceeEEEECCCCC
Q 011679 133 YYYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 133 Y~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
|.+||.. +.+|....|+|.+..
T Consensus 88 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 115 (120)
T 1x5f_A 88 YIFRVMAQNKHGSGESSAPLRVETQPES 115 (120)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEEEEEECCCccCCCCCCEEEEeCCCC
Confidence 9999954 235778889997643
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0045 Score=49.00 Aligned_cols=84 Identities=18% Similarity=0.290 Sum_probs=51.0
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+... ..+++.|.|.-....... .|+|............ .. .-...+.|+||+|++.|
T Consensus 10 ~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~---~~--------~~~~~~~l~~L~p~t~Y 76 (108)
T 2djs_A 10 TVPIMHQVSA--TMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSM---AR--------SQTNTARIDGLRPGMVY 76 (108)
T ss_dssp CCSCCEEEEE--CSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEE---EE--------ESSSEEEEESCCTTCEE
T ss_pred CCcceEEEec--CCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeE---Ee--------cCccEEEEcCCCCCCEE
Confidence 3555655543 347999999887544322 4556554432211100 00 01234678999999999
Q ss_pred EEEeCC------CCCceeEEEECCCCC
Q 011679 134 YYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
.+||.+ +.+|....|+|.+..
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 77 VVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 999954 246778899998754
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0092 Score=47.38 Aligned_cols=35 Identities=31% Similarity=0.514 Sum_probs=29.3
Q ss_pred EEeCCCCCCCEEEEEeCC------CCCceeEEEECCCCCCC
Q 011679 122 CLVDGLEYDTKYYYKIGS------GDSSREFWFQTPPKIDP 156 (479)
Q Consensus 122 v~l~gL~p~t~Y~Yrv~~------~~~s~~~~f~T~p~~~~ 156 (479)
+.|+||+|+|.|.+||.+ +.+|....|+|.+.+++
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 789999999999999943 46788889999887654
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0013 Score=63.22 Aligned_cols=67 Identities=18% Similarity=0.219 Sum_probs=41.3
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHHh----CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhcc--CCeEEcCCC
Q 011679 159 SYKFGIIGDLGQTYNSLSTLEHYMES----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY--QPWIWSAGN 232 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~~~l~~i~~~----~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~~~v~GN 232 (479)
..++.++||+|.... .+..+.+. ..+.++++||++...... .+....+..+... ..++.+.||
T Consensus 49 ~~~i~viGDIHG~~~---~L~~ll~~~~~~~~~~~vflGD~VDRG~~s--------~evl~lL~~lk~~~p~~v~~lrGN 117 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFH---DLMELFRIGGKSPDTNYLFMGDYVDRGYYS--------VETVTLLVALKVRYRERITILRGN 117 (309)
T ss_dssp CSSEEEECCCTTCHH---HHHHHHHHHCCTTTSCEEECSCCSSSSTTH--------HHHHHHHHHHHHHCTTTEEECCCT
T ss_pred cCCEEEEecCCCCHH---HHHHHHHHcCCCCCCEEEEeCCccCCCCCh--------HHHHHHHHHHHhhCCCcEEEEeCC
Confidence 356999999997643 33333222 567889999999653211 1122333333222 349999999
Q ss_pred cccc
Q 011679 233 HEIE 236 (479)
Q Consensus 233 HD~~ 236 (479)
||..
T Consensus 118 HE~~ 121 (309)
T 2ie4_C 118 HESR 121 (309)
T ss_dssp TSST
T ss_pred CCHH
Confidence 9985
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.016 Score=45.35 Aligned_cols=83 Identities=14% Similarity=0.232 Sum_probs=51.0
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--CCCCEEEEeecCCCC-ceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
.|..+.+.... .+++.|.|..... ...-.|+|....... ...+.. .....+.|+||+|++.|.
T Consensus 10 ~P~~~~~~~~~--~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~p~t~Y~ 75 (106)
T 2dju_A 10 PPIDLVVTETT--ATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDG------------VATTRYSIGGLSPFSEYA 75 (106)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBCC------------CCSSEEEEESCCTTCEEE
T ss_pred CCCCcEEEecc--CCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEccC------------CCccEEEEeCCCCCcEEE
Confidence 47777665433 4799999997631 122357776554321 111110 012245789999999999
Q ss_pred EEeCC------CCCceeEEEECCCCC
Q 011679 135 YKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 135 Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
+||.. +.+|....++|.+..
T Consensus 76 ~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 76 FRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp EEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EEEEEEeCCccCCCcccEEeEcCCCC
Confidence 99953 246777888887653
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.015 Score=46.69 Aligned_cols=84 Identities=23% Similarity=0.326 Sum_probs=52.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+... ..+++.|.|.-....... .|+|............ . ...-...+.|++|+|++.|
T Consensus 20 ~P~~l~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~Y 87 (119)
T 2ed7_A 20 APRDVVPVLV--SSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----T------TQPGSLQLTVGNLKPEAMY 87 (119)
T ss_dssp CCSCCEEEEE--CSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----C------CCTTCCEEEECSCCSSSEE
T ss_pred CCcceEEEec--CCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----e------ecCCceEEEeCCCCCCCEE
Confidence 5777766653 347999999876543332 4556554432221110 0 0112345788999999999
Q ss_pred EEEeCC------CCCceeEEEECCCC
Q 011679 134 YYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
.+||.+ +.+|....++|.+.
T Consensus 88 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 88 TFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 999843 35678888888764
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.011 Score=46.94 Aligned_cols=84 Identities=15% Similarity=0.171 Sum_probs=50.0
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC-CC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE-PG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~-~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+.+.. ....+++.|.|..... .+ .-.|+|....+.....+. . . ....+.|++|+|++.
T Consensus 11 ~P~~~~~~~-~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~--~~~~~~v~~L~p~t~ 77 (110)
T 2crz_A 11 PCLPPRLQG-RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-Q---------G--SEVECTVSSLLPGKT 77 (110)
T ss_dssp CCCCCEECS-CCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-E---------E--SCSEEEEESCCTTCE
T ss_pred CCCCceecc-ccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE-e---------C--CcEEEEECCcCCCCE
Confidence 355555532 1234789999975422 11 235677654433222221 0 0 123467899999999
Q ss_pred EEEEeCC------CCCceeEEEECCCCC
Q 011679 133 YYYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 133 Y~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
|.+||.+ +.+|....++|.+.+
T Consensus 78 Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 78 YSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEEEEEcCCccCCCCCccccccCCCC
Confidence 9999943 356788888887654
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0078 Score=47.78 Aligned_cols=82 Identities=17% Similarity=0.322 Sum_probs=51.6
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCC--CceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADK--FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
|..+++..-. .+++.|.|.-..... .-.|+|....+. ...... . ... ..+.|+||+|++.
T Consensus 11 p~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~---~-------~~~--~~~~i~~L~p~t~ 76 (109)
T 2e7h_A 11 VSDIRVTRSS--PSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFL---K-------TSE--NRAELRGLKRGAS 76 (109)
T ss_dssp CCCCEEEEEE--TTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEE---E-------ESS--SEEEEESCCTTSC
T ss_pred CCccEEEecC--CCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEE---c-------cCC--CEEEECCCCCCCe
Confidence 5566665433 479999998764332 235777665421 111111 0 011 1577899999999
Q ss_pred EEEEeCC------CCCceeEEEECCCCC
Q 011679 133 YYYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 133 Y~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
|.+||.. +.+|....|+|.+.+
T Consensus 77 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 77 YLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp EEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred EEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 9999943 357888899998754
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0028 Score=49.64 Aligned_cols=80 Identities=24% Similarity=0.330 Sum_probs=48.3
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCC--CCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPH--EPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~--~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+.. ...+++.|+|.... ... .-.|+|............+ -...+.|+||+|+|
T Consensus 11 ~P~~l~~~~--~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t 75 (103)
T 2edy_A 11 FPQNLHVTG--LTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKPDT 75 (103)
T ss_dssp CCEEEECSS--BCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCTTC
T ss_pred CCeeeEEEe--cCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCCCC
Confidence 466655543 23579999998872 222 2356676554422111110 12235789999999
Q ss_pred EEEEEeCC------CCCceeEEEECCC
Q 011679 132 KYYYKIGS------GDSSREFWFQTPP 152 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~p 152 (479)
.|.+||.+ +.+|....|+|.|
T Consensus 76 ~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 76 TYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred EEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 99999953 3467777777765
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.01 Score=47.49 Aligned_cols=81 Identities=15% Similarity=0.274 Sum_probs=51.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+++.... .+++.|+|....... .-.|+|............. -...+.|+||+|+|.|
T Consensus 20 ~P~~l~~~~~~--~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y 84 (116)
T 1x5g_A 20 PAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-------------SSHSYTINGLKKYTEY 84 (116)
T ss_dssp CCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-------------CSSEEEECSCCTTCEE
T ss_pred CCCccEEEecC--CCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEec-------------CCceEEEcCCCCCCEE
Confidence 46666665433 479999998764222 2357776654432211111 1235678999999999
Q ss_pred EEEeCC------CCCceeEEEECCCC
Q 011679 134 YYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
.+||.. +.+|....|+|.+.
T Consensus 85 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 85 SFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 999843 35677788888764
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.017 Score=46.50 Aligned_cols=87 Identities=17% Similarity=0.221 Sum_probs=52.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--CCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
.|..+++..-. .+++.|+|..... ...-.|+|....+...... .... ..-...+.|+||+|+|.|.+
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~---~~~~------~~~~~~~~i~~L~p~t~Y~~ 89 (119)
T 2ee2_A 21 APTEVGVKVLS--SSEISVHWEHVLEKIVESYQIRYWAAHDKEEAAN---RVQV------TSQEYSARLENLLPDTQYFI 89 (119)
T ss_dssp CCCSCEEEEEE--TTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCE---EEEE------ETTCSEEEECSCCTTCEEEE
T ss_pred CCCcEEEEEcc--CCEEEEEecCCCCCccceEEEEEEECCCcccCcE---EEEc------CCCEeEEEECCCCCCCEEEE
Confidence 46566665432 4799999987643 1123577765443211100 0010 11123568899999999999
Q ss_pred EeCC------CCCceeEEEECCCCCC
Q 011679 136 KIGS------GDSSREFWFQTPPKID 155 (479)
Q Consensus 136 rv~~------~~~s~~~~f~T~p~~~ 155 (479)
||.. +.+|....|+|.+.+.
T Consensus 90 ~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 90 EVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp EEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred EEEEEcCCccCCCCCCEEEECCCCCC
Confidence 9843 3567888899976543
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0024 Score=61.81 Aligned_cols=66 Identities=23% Similarity=0.230 Sum_probs=40.7
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHHh----CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh--ccCCeEEcCCCc
Q 011679 160 YKFGIIGDLGQTYNSLSTLEHYMES----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA--AYQPWIWSAGNH 233 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~l~~i~~~----~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~v~GNH 233 (479)
.++.++||+|.... .+..+.+. ..|-+|++||++...... .+....+..+. ..-.++.+.|||
T Consensus 57 ~~i~viGDIHG~~~---~L~~ll~~~g~~~~~~~vflGD~VDRG~~s--------~evl~lL~~lk~~~p~~v~~lrGNH 125 (330)
T 1fjm_A 57 APLKICGDIHGQYY---DLLRLFEYGGFPPESNYLFLGDYVDRGKQS--------LETICLLLAYKIKYPENFFLLRGNH 125 (330)
T ss_dssp SSEEEECBCTTCHH---HHHHHHHHHCSTTSSCEEECSCCSSSSSCH--------HHHHHHHHHHHHHSTTTEEECCCTT
T ss_pred CceEEecCCCCCHH---HHHHHHHHhCCCCcceEEeCCCcCCCCCCh--------HHHHHHHHHhhhhcCCceEEecCCc
Confidence 46899999997643 33333322 467899999999753221 11223333332 123589999999
Q ss_pred ccc
Q 011679 234 EIE 236 (479)
Q Consensus 234 D~~ 236 (479)
|..
T Consensus 126 E~~ 128 (330)
T 1fjm_A 126 ECA 128 (330)
T ss_dssp SSH
T ss_pred hHh
Confidence 975
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.017 Score=45.67 Aligned_cols=81 Identities=15% Similarity=0.237 Sum_probs=48.3
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+++.-. ..+++.++|.....+.. -.|.|..... . .... .-.-.+.|+||+|||.|
T Consensus 10 ~v~~l~v~~~--t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~----~-----~~~~------~~~t~~~i~gL~PgT~Y 72 (104)
T 2dle_A 10 QVFDVTAVNI--SATSLTLIWKVSDNESSSNYTYKIHVAGETD----S-----SNLN------VSEPRAVIPGLRSSTFY 72 (104)
T ss_dssp BEEEEEEEEE--CSSCEEEEEEESCSTTCCSCEEEEEEECSSC----E-----EEEE------ESSSEEECCSCCSSCEE
T ss_pred CCceEEEEEe--ecCEEEEEEcCCCCCCCceEEEEEEEECCCC----e-----EEEc------CCCCEEEECCCCCCCEE
Confidence 3555666543 35899999987644432 3455553211 0 0100 11235789999999999
Q ss_pred EEEeCC--C---CCceeEEEECCCCCC
Q 011679 134 YYKIGS--G---DSSREFWFQTPPKID 155 (479)
Q Consensus 134 ~Yrv~~--~---~~s~~~~f~T~p~~~ 155 (479)
.++|.. + ..+....++|.|.+.
T Consensus 73 ~~~V~A~~~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 73 NITVCPVLGDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp EEEEEEESSSCCCBCEEEEEECCCCSC
T ss_pred EEEEEEEECCcccCCeeEEEEccCCCC
Confidence 999854 2 234466778877653
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0026 Score=62.16 Aligned_cols=68 Identities=19% Similarity=0.161 Sum_probs=42.9
Q ss_pred CCeEEEEEecCCCCCCcHHHHHHHHHh------------CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh----
Q 011679 158 ASYKFGIIGDLGQTYNSLSTLEHYMES------------GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA---- 221 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~~~~l~~i~~~------------~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~---- 221 (479)
...+++++||+|... ..+..+.+. ++|.+|++||++...... ......+..+.
T Consensus 69 ~~~~i~vigDiHG~~---~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s--------~evl~~l~~l~~~~~ 137 (342)
T 2z72_A 69 GIKKVVALSDVHGQY---DVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQV--------NEVLWFMYQLDQQAR 137 (342)
T ss_dssp CCCEEEEECCCTTCH---HHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCH--------HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCH---HHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCH--------HHHHHHHHHHHHHHh
Confidence 357999999999754 333333332 368999999999643211 11222333322
Q ss_pred -ccCCeEEcCCCcccc
Q 011679 222 -AYQPWIWSAGNHEIE 236 (479)
Q Consensus 222 -~~~P~~~v~GNHD~~ 236 (479)
...+++.+.||||..
T Consensus 138 ~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 138 DAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HTTCEEEECCCHHHHH
T ss_pred hCCCeEEEEecCCcHH
Confidence 234699999999985
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0036 Score=59.95 Aligned_cols=67 Identities=18% Similarity=0.179 Sum_probs=40.5
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHHh-----CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc--cCCeEEcCC
Q 011679 159 SYKFGIIGDLGQTYNSLSTLEHYMES-----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA--YQPWIWSAG 231 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~~~l~~i~~~-----~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~v~G 231 (479)
..+++++||+|.... .+..+.+. ..+.++++||++...... .+....+..+.. ...++.+.|
T Consensus 59 ~~ri~viGDIHG~~~---~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s--------~evl~lL~~lk~~~p~~v~~lrG 127 (315)
T 3h63_A 59 TEKITVCGDTHGQFY---DLLNIFELNGLPSETNPYIFNGDFVDRGSFS--------VEVILTLFGFKLLYPDHFHLLRG 127 (315)
T ss_dssp TCEEEEECCCTTCHH---HHHHHHHHHCCCBTTBCEEEESCCSSSSTTH--------HHHHHHHHHHHHHSTTTEEEECC
T ss_pred CceEEEEecCCCCHH---HHHHHHHHhCCCCCCCEEEEeCCccCCCcCh--------HHHHHHHHHhhhhcCCcEEEEec
Confidence 568999999998743 23333322 234699999999753321 112223333221 235889999
Q ss_pred Ccccc
Q 011679 232 NHEIE 236 (479)
Q Consensus 232 NHD~~ 236 (479)
|||..
T Consensus 128 NHE~~ 132 (315)
T 3h63_A 128 NHETD 132 (315)
T ss_dssp TTSSH
T ss_pred Ccccc
Confidence 99964
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.016 Score=45.53 Aligned_cols=81 Identities=14% Similarity=0.166 Sum_probs=50.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+... ..+++.|+|....... .-.|+|............ . . ...+.|++|+|+|.|
T Consensus 10 ~P~~l~~~~~--~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~----~------~---~~~~~i~~L~p~t~Y 74 (106)
T 2ed8_A 10 PVENLQAVST--SPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIE----V------D---GLSYKLEGLKKFTEY 74 (106)
T ss_dssp CCEEEEEECS--STTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEE----E------C---SSCEEEESCCTTCEE
T ss_pred CCceeEEEec--CCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEe----C------C---ccEEEECCCCCCCEE
Confidence 5777776543 3579999999774221 235677655443221111 0 0 134678999999999
Q ss_pred EEEeCC------CCCceeEEEECCCC
Q 011679 134 YYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
.+||.. +.+|....++|.+.
T Consensus 75 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 75 SLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 999954 23577788888654
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.014 Score=46.10 Aligned_cols=72 Identities=19% Similarity=0.274 Sum_probs=44.2
Q ss_pred CCcEEEEEEcCCCCCC-----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCCC-----
Q 011679 71 GKAVIISWVTPHEPGP-----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSG----- 140 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~~-----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~----- 140 (479)
.+++.|.|......+. -.|+|....+....... +. . ....+.|++|+|++.|.|||.+-
T Consensus 21 ~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~~----~--~~~~~~v~~L~p~t~Y~frV~A~n~~G~ 89 (109)
T 1x5x_A 21 ITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPK-----YD----G--EDLAYTVKNLRRSTKYKFKVIAYNSEGK 89 (109)
T ss_dssp SSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEE-----EE----E--SCSEEEEESCCSSCEEEEEEEEECSSCE
T ss_pred CCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEe-----Ee----C--CccEEEECCCCCCCEEEEEEEEEeCCCC
Confidence 4799999987643322 35666654432111111 00 1 12246789999999999999542
Q ss_pred -CCceeEEEECCCC
Q 011679 141 -DSSREFWFQTPPK 153 (479)
Q Consensus 141 -~~s~~~~f~T~p~ 153 (479)
..|....++|.+.
T Consensus 90 s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 90 SNPSEVVEFTTCPD 103 (109)
T ss_dssp EEECCCEEEECCCC
T ss_pred cCCccCEEeEeCCC
Confidence 3567778888765
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.005 Score=49.20 Aligned_cols=73 Identities=18% Similarity=0.281 Sum_probs=45.7
Q ss_pred CCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC------C
Q 011679 71 GKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------G 140 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~------~ 140 (479)
.+++.|.|......+. -.|+|..........+. . +....+.|+||+|++.|.|||.+ +
T Consensus 24 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~------~------~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s 91 (110)
T 2db8_A 24 NNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY------V------GKETMCTVDGLHFNSTYNARVKAFNKTGVS 91 (110)
T ss_dssp SSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEE------E------ESCSCEEEECCCSSSCCEEEEEEECSSCBC
T ss_pred CCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEE------e------CCcCEEEECCCCCCCEEEEEEEEEeCCcCC
Confidence 5789999987754322 35667654332221111 0 01123567899999999999843 3
Q ss_pred CCceeEEEECCCCCC
Q 011679 141 DSSREFWFQTPPKID 155 (479)
Q Consensus 141 ~~s~~~~f~T~p~~~ 155 (479)
.+|+...++|.+.+.
T Consensus 92 ~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 92 PYSKTLVLQTSEGSG 106 (110)
T ss_dssp CCCSCEECCCCCCCC
T ss_pred CCCCCEEEEcCCCCC
Confidence 567888899987653
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0049 Score=59.56 Aligned_cols=68 Identities=18% Similarity=0.244 Sum_probs=41.2
Q ss_pred CCeEEEEEecCCCCCCcHHHHHHHHHh---C-C-CEEEEcCcccccCcccccccchhhhHHHHHHHhhhc--cCCeEEcC
Q 011679 158 ASYKFGIIGDLGQTYNSLSTLEHYMES---G-A-QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA--YQPWIWSA 230 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~~~~l~~i~~~---~-p-d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~v~ 230 (479)
...++.++||+|..... +..+.+. . . +.+|++||++...... .+....+..+.. ...++.+.
T Consensus 62 ~~~ri~viGDIHG~~~~---L~~ll~~~g~~~~~~~~vflGD~VDRG~~s--------~evl~lL~~lk~~~p~~v~llr 130 (335)
T 3icf_A 62 PDVKISVCGDTHGQFYD---VLNLFRKFGKVGPKHTYLFNGDFVDRGSWS--------CEVALLFYCLKILHPNNFFLNR 130 (335)
T ss_dssp TTCEEEEECCCTTCHHH---HHHHHHHHCCCBTTEEEEECSCCSSSSTTH--------HHHHHHHHHHHHHCTTTEEECC
T ss_pred cCceEEEEecCCCCHHH---HHHHHHHcCCCCCCcEEEEeCCccCCCcCh--------HHHHHHHHHHhhhCCCcEEEec
Confidence 46799999999987533 2233222 2 2 4699999999753321 112223333322 23589999
Q ss_pred CCcccc
Q 011679 231 GNHEIE 236 (479)
Q Consensus 231 GNHD~~ 236 (479)
||||..
T Consensus 131 GNHE~~ 136 (335)
T 3icf_A 131 GNHESD 136 (335)
T ss_dssp CTTSSH
T ss_pred Cchhhh
Confidence 999964
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.021 Score=44.86 Aligned_cols=85 Identities=18% Similarity=0.231 Sum_probs=49.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEe
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKI 137 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv 137 (479)
.|..+++..-. .+++.|+|.-......-.|+|........... ..... ... .+.|+||+|+|.|.++|
T Consensus 11 ~P~~l~~~~~~--~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~--~~~~~-----~~~---~~~l~~L~p~t~Y~~~V 78 (104)
T 2dkm_A 11 PPRALTLAAVT--PRTVHLTWQPSAGATHYLVRCSPASPKGEEEE--REVQV-----GRP---EVLLDGLEPGRDYEVSV 78 (104)
T ss_dssp CCCCCEEEEEC--SSEEEEECCCCSSCSEEEEEEEESSSCCSSCC--EEEEE-----SSS---EEEEESCCTTCCEEEEE
T ss_pred CCceeEEEecC--CCEEEEEEeCCCCCCeEEEEEEECCCCCCcce--EEEec-----CCC---EEEECCCCCCCEEEEEE
Confidence 47777776443 48999999766443334677765443211100 00010 111 67899999999999998
Q ss_pred CCC---CC--ceeEEEECCCCC
Q 011679 138 GSG---DS--SREFWFQTPPKI 154 (479)
Q Consensus 138 ~~~---~~--s~~~~f~T~p~~ 154 (479)
.+- .. .....++|.|.+
T Consensus 79 ~A~~~~~~s~p~~~~~~T~p~~ 100 (104)
T 2dkm_A 79 QSLRGPEGSEARGIRARTPTSG 100 (104)
T ss_dssp EEECSSSBCCCEEEECCCCCCS
T ss_pred EEECCCCCCCCEEEEEEcCCCC
Confidence 541 22 234456777554
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.02 Score=57.68 Aligned_cols=182 Identities=11% Similarity=0.065 Sum_probs=94.2
Q ss_pred CCeEEEEEecCCCCCCcH---HHHH----HHH-----------HhCCCEEEEcCcccccCccccc-----cc--------
Q 011679 158 ASYKFGIIGDLGQTYNSL---STLE----HYM-----------ESGAQTVLFLGDLSYADRYQFI-----DV-------- 206 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~~---~~l~----~i~-----------~~~pd~vl~~GD~~y~~~~~~~-----~~-------- 206 (479)
....++++||+|.+.... ..++ .+. ..+...+|++||.+...+.... .+
T Consensus 199 ~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~ 278 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAA 278 (476)
T ss_dssp SCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHH
T ss_pred CCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchh
Confidence 467899999999987631 1222 221 1268899999999965422100 00
Q ss_pred -chhhhHHHHHHHhhhccCCeEEcCCCcccccccCCCccccccccccccccCcC--CCCCCCCcEEEEEeCCEEEEEEcC
Q 011679 207 -GVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHL--ASKSSSPLWYAIRRASAHIIVLSS 283 (479)
Q Consensus 207 -~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~yysf~~g~~~fi~Ldt 283 (479)
....+.+.+++..+...+|+...|||||-.+. ... +.++. ...|..... ......| -|.|++++++|++...
T Consensus 279 ~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~-~lP-Qqplh--~~lfp~s~~~~~~~~vtN-P~~~~i~G~~~LgtsG 353 (476)
T 3e0j_A 279 SVEAVKMLDEILLQLSASVPVDVMPGEFDPTNY-TLP-QQPLH--PCMFPLATAYSTLQLVTN-PYQATIDGVRFLGTSG 353 (476)
T ss_dssp HHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCS-SSS-CCCCC--TTSCHHHHTSTTEEECCS-SEEEEETTEEEEECSS
T ss_pred hHHHHHHHHHHHHhcccCceEEecCCCCCcccc-cCC-CCCcC--HHHhhhhhhcCccEEeCC-CeEEEECCEEEEEECC
Confidence 12345566778888889999999999997532 111 11110 001100000 0000122 2568899999988543
Q ss_pred CC-----CCCCChHHHHHHHHHHhhccC-CCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEeccccc
Q 011679 284 YS-----PFVKYTPQWEWLREELKKVDR-EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHA 357 (479)
Q Consensus 284 ~~-----~~~~~~~Q~~WL~~~L~~~~~-~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~ 357 (479)
.. .+.....-++.|+..|+--.- ..++=.+ |.|..... .+++-+.-.+++++||.|.
T Consensus 354 qnidDi~ky~~~~~~l~~me~~LkwrHlAPTaPdTl-----~~yP~~~~------------DpfVi~~~PhVyf~Gnq~~ 416 (476)
T 3e0j_A 354 QNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTL-----GCYPFYKT------------DPFIFPECPHVYFCGNTPS 416 (476)
T ss_dssp HHHHHHHHHSCCCCHHHHHHHHHHBTCSCTTSCCC-----------CCS------------CTTSCSSCCSEEEEEEESS
T ss_pred CCHHHHHhcCCCCCHHHHHHHHHHHhccCCCCCCce-----eeccCCCC------------CceeecCCCcEEEeCCCCc
Confidence 11 112234456788888875100 1111000 11111000 0122244588999999999
Q ss_pred ceee
Q 011679 358 YERS 361 (479)
Q Consensus 358 y~r~ 361 (479)
|+-.
T Consensus 417 f~t~ 420 (476)
T 3e0j_A 417 FGSK 420 (476)
T ss_dssp CEEE
T ss_pred ccee
Confidence 8654
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.011 Score=47.16 Aligned_cols=83 Identities=16% Similarity=0.308 Sum_probs=51.0
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
.|..+++... ..+++.|+|...... ..-.|+|............ . . -...+.|+||+|+|.|.+
T Consensus 20 ~P~~l~~~~~--~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----~------~--~~~~~~i~~L~p~t~Y~~ 85 (115)
T 1x5z_A 20 QPLNFKAEPE--SETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----I------E--PGTSYRLQGLKPNSLYYF 85 (115)
T ss_dssp CCEEEEEECS--SSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----E------C--SSSEEEEECCCTTCEEEE
T ss_pred CCccCEeeeC--CCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEe----c------C--CCcEEEECCCCCCCeEEE
Confidence 5777766543 358999999877432 1234555544332211100 0 0 113567899999999999
Q ss_pred EeCC------CCCceeEEEECCCCC
Q 011679 136 KIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 136 rv~~------~~~s~~~~f~T~p~~ 154 (479)
||.. +.+|....|+|.+.+
T Consensus 86 ~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 86 RLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp CEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEEECCCcccCCCcCEEEecCCCC
Confidence 9954 245778889997654
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0043 Score=59.02 Aligned_cols=68 Identities=22% Similarity=0.182 Sum_probs=39.9
Q ss_pred EEEEEecCCCCCCcHHH-HHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh--ccCCeEEcCCCcccc
Q 011679 161 KFGIIGDLGQTYNSLST-LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA--AYQPWIWSAGNHEIE 236 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~~-l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~v~GNHD~~ 236 (479)
+++++||+|........ ++.......+-+|++||++...... .+....+..+. ....++.+.||||..
T Consensus 57 ~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s--------~evl~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 57 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS--------LETICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCH--------HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccCCCCCc--------HHHHHHHHHHHhhCCCcEEEEecCchhh
Confidence 58999999987533222 2221112557899999999753321 11222232222 123589999999974
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.034 Score=44.54 Aligned_cols=84 Identities=14% Similarity=0.234 Sum_probs=49.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCCEE----EEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPSTV----SYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v----~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+.... .+++.|.|.-....+..+. +|............ .. ... ..+.|++|+|++.|
T Consensus 20 ~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~------~~~--~~~~v~~L~p~t~Y 86 (118)
T 1x3d_A 20 IPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQC---YM------GSQ--KQFKITKLSPAMGC 86 (118)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEE---EE------ESC--SEEEEESCCTTCEE
T ss_pred CCCCcEEeccC--CCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEe---ec------cCC--cEEEeCCCCCCCEE
Confidence 45555555433 4799999988754443444 44433221111111 00 111 24578999999999
Q ss_pred EEEeCC------CCCceeEEEECCCCC
Q 011679 134 YYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
.|||.+ +..|....++|.+.+
T Consensus 87 ~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 87 KFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 999954 346777788887643
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.019 Score=46.88 Aligned_cols=85 Identities=16% Similarity=0.322 Sum_probs=51.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+++.... .+++.|+|....... .-.|+|.......... .... ...-...+.|++|+|+|.|
T Consensus 30 ~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~---~~~~------~~~~~~~~~i~~L~p~t~Y 98 (130)
T 1wfo_A 30 PPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTA---TVEV------LAPSARQYTATGLKPESVY 98 (130)
T ss_dssp CCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCC---CEEE------ECTTCCEEEEESCCSSSEE
T ss_pred CCCceEEEecC--CCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceE---EEEE------eCCCceEEEEcCCCCCCEE
Confidence 56666666543 479999998764332 2356666544321100 0001 1112345778999999999
Q ss_pred EEEeCC------CCCceeEEEECCCC
Q 011679 134 YYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
.+||.. +.+|....|+|.+.
T Consensus 99 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 99 LFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEEEEeCCcCCCCcccEEEecCCC
Confidence 999954 23567778888764
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=96.04 E-value=0.005 Score=59.84 Aligned_cols=68 Identities=19% Similarity=0.200 Sum_probs=40.2
Q ss_pred EEEEEecCCCCCCcHHHHHHHHH-hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc--cCCeEEcCCCcccc
Q 011679 161 KFGIIGDLGQTYNSLSTLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA--YQPWIWSAGNHEIE 236 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~~l~~i~~-~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~v~GNHD~~ 236 (479)
+++++||+|........+-.... ...+-+|++||++...... .+....+..+.. ...++.+.||||..
T Consensus 71 pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s--------~Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 71 PVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFS--------IECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSTTH--------HHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred cceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCcCh--------HHHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 58999999987533222211111 2568899999999653221 112222333322 23489999999975
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0048 Score=62.58 Aligned_cols=69 Identities=20% Similarity=0.211 Sum_probs=40.9
Q ss_pred eEEEEEecCCCCCCcHHHHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhcc--CCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNSLSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY--QPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~~~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~~~v~GNHD~~ 236 (479)
.++.++||+|........+-.+... ..|-+|++||++...... .+....+..+... -.++.+.||||..
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S--------~Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFS--------IECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCH--------HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCH--------HHHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 3589999999765433222222222 458899999999653321 1122233333222 2489999999974
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.029 Score=45.91 Aligned_cols=83 Identities=16% Similarity=0.312 Sum_probs=49.4
Q ss_pred CCCc-eEEEEeecCCCCcEEEEEEcCCCCC-CC-EEEEeecCC-----------CCceEEEeEEEEEeeecceeceEEEE
Q 011679 57 NSPQ-QVHITQGDYDGKAVIISWVTPHEPG-PS-TVSYGTSAD-----------KFDFTAEGTVNNYTFYKYKSGYIHQC 122 (479)
Q Consensus 57 ~~P~-~v~l~~~~~~~~~~~v~W~t~~~~~-~~-~v~y~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~v 122 (479)
.+|. .+.+..-. .++++|.|......+ .. .++|..... ..+..+. .. . ....
T Consensus 17 ~~P~~~~~~~~~~--~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~-~~---------~--~~~~ 82 (127)
T 2dmk_A 17 NPPSIREELCTAS--HDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVP-NI---------K--QNHY 82 (127)
T ss_dssp CCCEEEEEEEEEE--TTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEE-EE---------C--SSEE
T ss_pred cCCCCCCEEEeee--CCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEee-cc---------c--CCeE
Confidence 3466 56555433 479999999886433 12 677765111 1111111 00 0 1135
Q ss_pred EeCCCCCCCEEEEEeCCC-----CCceeEEEECCCC
Q 011679 123 LVDGLEYDTKYYYKIGSG-----DSSREFWFQTPPK 153 (479)
Q Consensus 123 ~l~gL~p~t~Y~Yrv~~~-----~~s~~~~f~T~p~ 153 (479)
+|+||+|++.|.|||.+- ..|....++|.+.
T Consensus 83 ~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 83 TVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred EECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 678999999999999542 3466778888764
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.021 Score=45.94 Aligned_cols=88 Identities=16% Similarity=0.238 Sum_probs=52.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--CC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--PG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+++... ..+++.|+|..... .. .-.|+|........... ..... ....-...+.|+||+|+|
T Consensus 18 ~P~~~~~~~~--~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~i~~L~p~t 89 (122)
T 1va9_A 18 PPMDVTLQPV--TSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY--SIVEM----KATGDSEVYTLDNLKKFA 89 (122)
T ss_dssp CCEEEEEEEC--SSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC--BCCBC----CCCSSEEEEEEESCCSSC
T ss_pred CCcceEEEec--cCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce--EEEEE----ecCCceeEEEeCCCCCCC
Confidence 4777776543 35799999998753 11 23567765543211000 00000 011224567889999999
Q ss_pred EEEEEeCC------CCCceeEEEECCCC
Q 011679 132 KYYYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
.|.+||.+ +.+|....|+|.+.
T Consensus 90 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 90 QYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp CEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 99999953 35677788888754
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.021 Score=46.05 Aligned_cols=75 Identities=20% Similarity=0.359 Sum_probs=45.4
Q ss_pred CCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCCC---CC
Q 011679 70 DGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSG---DS 142 (479)
Q Consensus 70 ~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~---~~ 142 (479)
..+++.|+|....+.+. -.|+|.......+.... ..+ +-...+.|.||+|++.|.+||.+- +.
T Consensus 20 ~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~----~~~------~~~~~~~l~~L~p~t~Y~frV~A~N~~G~ 89 (114)
T 2kbg_A 20 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEK----KVQ------GNKDHIILEHLQWTMGYEVQITAANRLGY 89 (114)
T ss_dssp STTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEE----EEE------TTTCCEEECCCCTTCCEEEEEEEECTTSC
T ss_pred CCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeE----EcC------CCcCEEEEcCCCCCCEEEEEEEEEeCCcC
Confidence 35899999986543332 36888876443332211 111 112246799999999999999542 22
Q ss_pred c--eeEEEECCCCC
Q 011679 143 S--REFWFQTPPKI 154 (479)
Q Consensus 143 s--~~~~f~T~p~~ 154 (479)
| ....|+|.+.+
T Consensus 90 s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 90 SEPTVYEFSMPPKP 103 (114)
T ss_dssp EEEEEEEECCCCCC
T ss_pred cCCcCCEEEcCCCC
Confidence 2 24578887654
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.04 Score=44.18 Aligned_cols=91 Identities=13% Similarity=0.096 Sum_probs=51.6
Q ss_pred CCCCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCc----eEEEeEEEEEeeecceeceEEEEEeCCCCCC
Q 011679 56 HNSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFD----FTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (479)
Q Consensus 56 ~~~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~ 130 (479)
+..|..+++.- ...+++.|+|...... ..-.|+|....+... ..-.......+ +-.-.+.|+||+|+
T Consensus 9 pp~p~~L~v~~--~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~------~~~t~~~l~gL~Pg 80 (112)
T 2cui_A 9 RPRLSQLSVTD--VTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVP------GTRHSAVLRDLRSG 80 (112)
T ss_dssp CCCCCCCEEES--CCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEE------TTCCEEEECSCCTT
T ss_pred CCCCCceEEEe--ecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEEcC------CCcCEEEeCCCCCC
Confidence 34567776664 3468999999875432 234688876543200 00000001111 11236789999999
Q ss_pred CEEEEEeCC---CCC--ceeEEEECCCCC
Q 011679 131 TKYYYKIGS---GDS--SREFWFQTPPKI 154 (479)
Q Consensus 131 t~Y~Yrv~~---~~~--s~~~~f~T~p~~ 154 (479)
|.|..+|.. +.. ......+|.+.+
T Consensus 81 T~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 81 TLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp CEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred CEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 999999853 222 345577777654
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.0085 Score=61.29 Aligned_cols=67 Identities=18% Similarity=0.170 Sum_probs=40.6
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHHHh-----CCCEEEEcCcccccCcccccccchhhhHHHHHHHhh--hccCCeEEcCC
Q 011679 159 SYKFGIIGDLGQTYNSLSTLEHYMES-----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS--AAYQPWIWSAG 231 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~~~l~~i~~~-----~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~v~G 231 (479)
.++++++||+|.... .+..+.+. ..|.+|++||++...... .+....+..+ .....++.+.|
T Consensus 212 ~~~~~vigDiHG~~~---~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s--------~e~~~~l~~l~~~~~~~~~~lrG 280 (477)
T 1wao_1 212 TEKITVCGDTHGQFY---DLLNIFELNGLPSETNPYIFNGDFVDRGSFS--------VEVILTLFGFKLLYPDHFHLLRG 280 (477)
T ss_dssp SCEEEEECBCTTCHH---HHHHHHHHHCCCBTTBCEEEESCCSSSSTTH--------HHHHHHHHHHHHHSTTTEEEECC
T ss_pred CcceEEEeCCCCCHH---HHHHHHHHcCCCCCcCeEEEeccccCCCcch--------HHHHHHHHHHHhhCCCceEeecC
Confidence 579999999997643 33333322 235699999999653221 1112222222 22357999999
Q ss_pred Ccccc
Q 011679 232 NHEIE 236 (479)
Q Consensus 232 NHD~~ 236 (479)
|||..
T Consensus 281 NHE~~ 285 (477)
T 1wao_1 281 NHETD 285 (477)
T ss_dssp TTSSH
T ss_pred CccHH
Confidence 99964
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=95.85 E-value=0.11 Score=40.67 Aligned_cols=84 Identities=21% Similarity=0.297 Sum_probs=48.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-CCEEEEeecCCC-CceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-PSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
+|..+.+.. ...+++.|+|.-....- .-.|+|...... ..... ... .-...+.|+||+|||.|.+
T Consensus 5 ~P~~l~v~~--~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~v~------~~~~~~~l~~L~p~t~Y~~ 71 (104)
T 2rb8_A 5 APSQIEVKD--VTDTTALITWMPPSQPVDGFELTYGIKDVPGDRTTI-----DLT------EDENQYSIGNLKPDTEYEV 71 (104)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEE-----EEE------TTCCEEEECSCCTTCEEEE
T ss_pred CCCccEEEE--ecCCeEEEEEcCCCCccceEEEEEEECcCCCceEEE-----EcC------CCcCEEEeCCCCCCCEEEE
Confidence 477776654 34589999998764221 236777654321 11111 010 1123467899999999999
Q ss_pred EeCC----C-CCceeEEEECCCCC
Q 011679 136 KIGS----G-DSSREFWFQTPPKI 154 (479)
Q Consensus 136 rv~~----~-~~s~~~~f~T~p~~ 154 (479)
+|.+ + .......|+|.+..
T Consensus 72 ~V~A~~~~g~s~p~~~~~~T~~~~ 95 (104)
T 2rb8_A 72 SLISRRGDMSSNPAKETFTTGLAA 95 (104)
T ss_dssp EEEEEETTEECCCEEEEEECCC--
T ss_pred EEEEEeCCccCCCEEEEEECCCCc
Confidence 9954 1 22345678887653
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=95.84 E-value=0.07 Score=41.74 Aligned_cols=81 Identities=12% Similarity=0.176 Sum_probs=48.3
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--C----CCCEEEEeecCCCC--ceEEEeEEEEEeeecceeceEEEEEeCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--P----GPSTVSYGTSADKF--DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~----~~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p 129 (479)
+|..+.+..- ..+++.|+|.-... . ..-.|.|....... ... ..... . -...+.|+||+|
T Consensus 7 ~P~~~~~~~~--s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~----~~~v~----~--~~~~~~l~~L~p 74 (102)
T 3n1f_C 7 GPHIAYTEAV--SDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYK----RDVVE----G--SKQWHMIGHLQP 74 (102)
T ss_dssp CCEEEEEEEC--SSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCE----EEEEE----T--TCSEEEECSCCT
T ss_pred CCceeEEEEc--CCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceE----EEEEc----C--CceEEECCCCCC
Confidence 4777766543 35899999987642 1 12367887754321 111 01111 0 112358999999
Q ss_pred CCEEEEEeCC------CCCceeEEEEC
Q 011679 130 DTKYYYKIGS------GDSSREFWFQT 150 (479)
Q Consensus 130 ~t~Y~Yrv~~------~~~s~~~~f~T 150 (479)
+|.|..+|.+ +..|....++|
T Consensus 75 ~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 75 ETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp TCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred CCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 9999999843 35566777776
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.82 E-value=0.015 Score=46.87 Aligned_cols=71 Identities=18% Similarity=0.234 Sum_probs=43.3
Q ss_pred CCcEEEEEEcCCCC-----CCCEEEEeecCCC-CceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC-----
Q 011679 71 GKAVIISWVTPHEP-----GPSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS----- 139 (479)
Q Consensus 71 ~~~~~v~W~t~~~~-----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~----- 139 (479)
.+++.|.|.-.... ..-.|+|....+. .+..+. . .......|++|+|++.|.|||.+
T Consensus 32 ~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~------~------~~~~~~~v~~L~p~t~Y~frV~A~n~~G 99 (120)
T 2crm_A 32 SHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY------S------GATREHLCDRLNPGCFYRLRVYCISDGG 99 (120)
T ss_dssp TTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE------C------SSCSEEEECSCCTTSCEEEEEEEEETTE
T ss_pred CCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE------e------ccccEEEECCCCCCCEEEEEEEEEcCCc
Confidence 47999999876433 1235666654431 221110 0 11224678999999999999954
Q ss_pred -CCCceeEEEECCCC
Q 011679 140 -GDSSREFWFQTPPK 153 (479)
Q Consensus 140 -~~~s~~~~f~T~p~ 153 (479)
+.+|....++|.+.
T Consensus 100 ~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 100 QSAVSESLLVQTPAV 114 (120)
T ss_dssp ECCCCCCCCCCCCCC
T ss_pred cCCCcccEEEEcCCC
Confidence 24566667777654
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.053 Score=43.91 Aligned_cols=85 Identities=14% Similarity=0.220 Sum_probs=48.4
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCCCCC-----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEPGPS-----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~~~~-----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
|..+.+.... .+ +.|+|.-....+.. .|+|.......+.... .... ...-...+.|++|+|+|.|
T Consensus 11 P~~~~~~~~~--~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~---~~~~----~~~~~~~~~i~~L~p~t~Y 80 (122)
T 2e3v_A 11 PSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW---YDAK----EASMEGIVTIVGLKPETTY 80 (122)
T ss_dssp CEEEEEEECS--SC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEE---EEHH----HHHTTTEEEECSCCTTCEE
T ss_pred CCccEEEecC--Cc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccce---eeee----ecCccceEEeCCCCCCCEE
Confidence 6666665432 34 99999976433222 4556554432221110 0000 0011235678999999999
Q ss_pred EEEeCC------CCCceeEEEECCCC
Q 011679 134 YYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
.+||.+ +.+|....|+|.|.
T Consensus 81 ~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 81 AVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCCC
T ss_pred EEEEEEEeCCccCCCcccccccccCC
Confidence 999953 35677778888765
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.79 E-value=0.1 Score=39.25 Aligned_cols=65 Identities=17% Similarity=0.409 Sum_probs=39.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEe
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKI 137 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv 137 (479)
+|..+.+.... .+++.++|....+. .....|....+. ... + . ... -...+++|+|++.|+|||
T Consensus 6 ~P~~l~~~~~~--~~sv~L~W~~~~~~-~~i~~Y~v~~~~-~~~--~---~------~~~--~~~~~~~L~~~t~Y~~~V 68 (88)
T 1k85_A 6 APTNLASTAQT--TSSITLSWTASTDN-VGVTGYDVYNGT-ALA--T---T------VTG--TTATISGLAADTSYTFTV 68 (88)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSCC-SSEEEEEEEESS-SEE--E---E------ESS--SEEEECCCCSSCEEEEEE
T ss_pred CCCccEEEecc--CCEEEEEECCCCCC-CCccEEEEEECC-EEE--e---e------cCC--CEEEeCCCCCCCEEEEEE
Confidence 57777666533 57999999876432 235556543221 111 1 1 011 135689999999999999
Q ss_pred CC
Q 011679 138 GS 139 (479)
Q Consensus 138 ~~ 139 (479)
..
T Consensus 69 ~A 70 (88)
T 1k85_A 69 KA 70 (88)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.024 Score=45.79 Aligned_cols=81 Identities=19% Similarity=0.370 Sum_probs=50.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--CC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--PG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+.... .+++.|+|..... .. .-.|+|....+...... . ..-...+.|+||+|+|
T Consensus 31 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------~------~~~~~~~~i~~L~p~t 96 (124)
T 2ed9_A 31 PPQNVSLEVVN--SRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------L------EPNNLWYLFTGLEKGS 96 (124)
T ss_dssp CCBSCCEEEEE--TTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------E------CSSCSEEEEECCCSSC
T ss_pred CCeeeEEEEcC--CCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------e------cCCcCEEEEcCCCCCC
Confidence 46666665433 4799999987743 22 13567766554322111 1 0122346789999999
Q ss_pred EEEEEeCC------CCCceeEEEECCC
Q 011679 132 KYYYKIGS------GDSSREFWFQTPP 152 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~p 152 (479)
.|.+||.+ +.+|....|+|+.
T Consensus 97 ~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 97 QYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999843 3568888888863
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.66 E-value=0.067 Score=43.00 Aligned_cols=71 Identities=17% Similarity=0.262 Sum_probs=41.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecC-CCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSA-DKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+.+..- ..+++.|.|.-..+.+. -.|+|.... +..+...... . ..-...+.|++|+|++.
T Consensus 20 ~P~~~~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---~------~~~~~~~~v~~L~p~t~ 88 (121)
T 1x4z_A 20 APDRPTISTA--SETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA---I------PPSRLSVEITGLEKGIS 88 (121)
T ss_dssp CCCCCEEEEC--CSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE---E------CTTCCEEEEESCCTTCE
T ss_pred cCCCCEEEEc--cCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecc---c------CCCcCEEEECCCCCCCE
Confidence 4666656543 35799999984432222 357776654 2222221110 0 11233567899999999
Q ss_pred EEEEeCC
Q 011679 133 YYYKIGS 139 (479)
Q Consensus 133 Y~Yrv~~ 139 (479)
|.|||.+
T Consensus 89 Y~frV~A 95 (121)
T 1x4z_A 89 YKFRVRA 95 (121)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999954
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.59 E-value=0.13 Score=45.49 Aligned_cols=83 Identities=19% Similarity=0.144 Sum_probs=49.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC--------CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP--------GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p 129 (479)
.|..+.+... ..+++.|+|.-...+ ..-.|+|............. ..-...+.|++|+|
T Consensus 7 ~P~~l~~~~~--~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p 73 (211)
T 3p4l_A 7 PPVGVQASIL--SHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA-----------NATTLSYLVTGLKP 73 (211)
T ss_dssp CCEEEEEEEC--SSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEE-----------EESSSEEEECSCCT
T ss_pred CCCCEEEEec--CCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEe-----------CCCceEEEecCcCC
Confidence 4777776543 357999999974311 12357776544321111110 01123567899999
Q ss_pred CCEEEEEeCC------CCCceeEEEECCCC
Q 011679 130 DTKYYYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 130 ~t~Y~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
+|.|.+||.. +.+|....++|.+.
T Consensus 74 ~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 74 NTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp TCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred CCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 9999999853 24567788888654
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.55 E-value=0.016 Score=48.35 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=28.0
Q ss_pred EEEEeCCCCCCCEEEEEeCC------CCCceeEEEECCCCC
Q 011679 120 HQCLVDGLEYDTKYYYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 120 ~~v~l~gL~p~t~Y~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
..+.|+||+|+|.|..||.+ |..|....|+|.+..
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~ 122 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCC
Confidence 35779999999999999943 356788899998653
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.51 E-value=0.12 Score=40.31 Aligned_cols=77 Identities=17% Similarity=0.299 Sum_probs=45.3
Q ss_pred EEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEe
Q 011679 62 VHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKI 137 (479)
Q Consensus 62 v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv 137 (479)
+.+... ..+++.|.|.-..... .-.|+|........... .. ..-...+.|++|+|++.|.+||
T Consensus 13 ~~v~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~~V 79 (107)
T 2dn7_A 13 MMISTT--AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-----DF------GKDDQHFTVTGLHKGTTYIFRL 79 (107)
T ss_dssp EEEEEC--STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-----EE------ETTCCEEEEECCCTTCEEEEEE
T ss_pred EeEEec--CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEE-----Ee------CCCccEEEeCCCCCCCEEEEEE
Confidence 455443 3579999999874332 23577765554322211 10 0112356789999999999999
Q ss_pred CCC------CCceeEEEECCC
Q 011679 138 GSG------DSSREFWFQTPP 152 (479)
Q Consensus 138 ~~~------~~s~~~~f~T~p 152 (479)
.+- ..|. ..++|.+
T Consensus 80 ~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 80 AAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEETTEEEEEEE-EEEECCC
T ss_pred EEEcCCcccCCee-eEEeCCC
Confidence 542 2344 4577754
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.12 Score=40.97 Aligned_cols=82 Identities=18% Similarity=0.249 Sum_probs=49.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCc--eEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFD--FTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
.|..+.+.- ...+++.|+|.-.... ..-.|+|....+... ..+.+ -...+.|+||+|+|.|.
T Consensus 10 pP~~l~~~~--vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~v~~-------------~~t~~~l~~L~p~T~Y~ 74 (108)
T 2ee3_A 10 PPRHLGFSD--VSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAPG-------------NATSAMLGPLSSSTTYT 74 (108)
T ss_dssp CSSCEEEES--CCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEEEET-------------TCCEEEECSCCSSCEEE
T ss_pred CCceEEEEE--ccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEEcCC-------------CcCEEEcCCCCCCCEEE
Confidence 477776653 4568999999765322 224688877654321 11111 11246899999999999
Q ss_pred EEeCC---CCCc--eeEEEECCCCC
Q 011679 135 YKIGS---GDSS--REFWFQTPPKI 154 (479)
Q Consensus 135 Yrv~~---~~~s--~~~~f~T~p~~ 154 (479)
.+|.+ .+.| ....|+|.+.+
T Consensus 75 v~V~A~~~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 75 VRVTCLYPGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp EEEEEECTTSCEEEEEEEEECCCCC
T ss_pred EEEEEEeCCCcCCCccCEEEeCCCC
Confidence 99843 1222 23468886433
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.37 E-value=0.24 Score=39.94 Aligned_cols=84 Identities=14% Similarity=0.197 Sum_probs=46.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCC----EEEEeecCCC-CceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+.+..- ..+++.|.|.-..+.... .|+|...... ....... ... .. ... .+.+|+|++.
T Consensus 19 ~P~~~~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~---~~~----~~-~~~--~i~~L~p~t~ 86 (127)
T 1uey_A 19 PPFDLELTDQ--LDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT---EVS----GT-QTT--AQLNLSPYVN 86 (127)
T ss_dssp CCEEEEEECC--SSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE---EEE----SS-CCE--EEECCCTTCE
T ss_pred CCCCcEEEEc--cCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEe---eeC----CC-ceE--EEecCCCCCE
Confidence 5777766543 357999999965433333 4555443221 1111111 110 11 112 3569999999
Q ss_pred EEEEeCC------CCCcee-EEEECCCC
Q 011679 133 YYYKIGS------GDSSRE-FWFQTPPK 153 (479)
Q Consensus 133 Y~Yrv~~------~~~s~~-~~f~T~p~ 153 (479)
|.+||.+ +..|.. ..++|.+.
T Consensus 87 Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 87 YSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp ECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEEEEEEEeCCccCCccccccceEcCCC
Confidence 9999953 234554 46777654
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.058 Score=44.00 Aligned_cols=84 Identities=21% Similarity=0.419 Sum_probs=49.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--CCCCEEEE----eecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSY----GTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~v~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+... ..+++.|+|..... .......| ...... ....... ...-...+.|+||+|+|
T Consensus 21 ~P~~l~~~~~--~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~~~~~~~----~~~~~~~~~i~~L~p~t 88 (132)
T 1x5h_A 21 APQNLSLEVR--NSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTETL----VSGTQLSQLIEGLDRGT 88 (132)
T ss_dssp CCEEEEEECC--SSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEECCB----CCTTCCEEEEECCCSSC
T ss_pred CCeeeEEEeC--CCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------CccEEEE----eCCCccEEEeCCCCCCC
Confidence 4666666533 35899999998754 23334344 332210 0000000 11223456789999999
Q ss_pred EEEEEeCC------CCCceeEEEECCCC
Q 011679 132 KYYYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
.|.+||.+ +.+|....|+|.+.
T Consensus 89 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 89 EYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 99999854 24677888999763
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.051 Score=44.38 Aligned_cols=87 Identities=23% Similarity=0.253 Sum_probs=50.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcC--CCCCCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTP--HEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~--~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+... ..+++.|.|... ...... .|+|........... .... .......+.|+||+|+|
T Consensus 21 ~P~~l~~~~~--~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~------~~~~~~~~~i~~L~p~t 90 (134)
T 2edx_A 21 PPQKVMCVSM--GSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRH--VVDG------ISREHSSWDLVGLEKWT 90 (134)
T ss_dssp CSEEEEEECS--SSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCE--EECC------CBTTCSEEEEESCCTTC
T ss_pred CCcccEEEeC--CCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccE--EEEe------eCCCccEEEeCCCCCCC
Confidence 4667766543 357999999987 333322 345544333211000 0000 01223456789999999
Q ss_pred EEEEEeCC------CCCceeEEEECCCCC
Q 011679 132 KYYYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
.|.+||.. +.+|....++|.+..
T Consensus 91 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 119 (134)
T 2edx_A 91 EYRVWVRAHTDVGPGPESSPVLVRTDEDV 119 (134)
T ss_dssp EEEEEEEEEETTBCCCCCCCEEEECCCCS
T ss_pred EEEEEEEEEcCCCcCCCCCCEEeecCCCC
Confidence 99999843 356777788887643
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.15 Score=39.55 Aligned_cols=70 Identities=23% Similarity=0.382 Sum_probs=42.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+.. ...+++.|+|.-...+ ..-.|+|........... ... ..-.-.+.|+||+|+|.|.+|
T Consensus 4 ~P~~l~~~~--~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~----~~~------~~~~t~~~i~~L~p~t~Y~~~ 71 (100)
T 3b83_A 4 PPFNIKVTN--ITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETT----VDL------TSSITSLTLTNLEPNTTYEIR 71 (100)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEE----EEE------CTTEEEEEECSCCTTCEEEEE
T ss_pred cCCccEEEE--ecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceE----EEE------CCcceEEEECCCCCCCEEEEE
Confidence 477776654 3458999999876432 224677765543211110 000 112345788999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|.+
T Consensus 72 V~A 74 (100)
T 3b83_A 72 IVA 74 (100)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.31 E-value=0.11 Score=41.03 Aligned_cols=81 Identities=14% Similarity=0.096 Sum_probs=49.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC---CC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE---PG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~---~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~ 130 (479)
.|..+.+..-....+++.|+|..... +. .-.|+|....+.....+.. . -...+.|.+|+||
T Consensus 10 pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~----------~--~~~~~~l~~L~p~ 77 (109)
T 1uc6_A 10 PPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL----------S--NGTAHTITDAYAG 77 (109)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE----------S--SCSEEEETTCCSS
T ss_pred CCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEec----------c--cCCEEEEeCCCCC
Confidence 47777776532234799999998643 21 2367777765432221110 0 1124678999999
Q ss_pred CEEEEEeCCC--------CCceeEEEEC
Q 011679 131 TKYYYKIGSG--------DSSREFWFQT 150 (479)
Q Consensus 131 t~Y~Yrv~~~--------~~s~~~~f~T 150 (479)
+.|..||.+. .||....++|
T Consensus 78 t~Y~~~VRa~~~g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 78 KEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp SCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred CEEEEEEEEEeCCCCCcCcCCCCeeeee
Confidence 9999999642 3566655554
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.31 E-value=0.027 Score=45.84 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=26.8
Q ss_pred EEEeCCCCCCCEEEEEeCCC------CCceeEEEECCCCC
Q 011679 121 QCLVDGLEYDTKYYYKIGSG------DSSREFWFQTPPKI 154 (479)
Q Consensus 121 ~v~l~gL~p~t~Y~Yrv~~~------~~s~~~~f~T~p~~ 154 (479)
.+.|+||+|+|.|.+||.+- .+|+...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 36789999999999999542 35777889997653
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.31 E-value=0.11 Score=42.12 Aligned_cols=75 Identities=16% Similarity=0.215 Sum_probs=46.4
Q ss_pred CCCcEEEEEEcCCCCC---CCEEEEeecCCC---CceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeC-----
Q 011679 70 DGKAVIISWVTPHEPG---PSTVSYGTSADK---FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIG----- 138 (479)
Q Consensus 70 ~~~~~~v~W~t~~~~~---~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~----- 138 (479)
..+++.|+|......+ .-.|.|...... ..... ... ...-...+.|+||+|+|.|..+|.
T Consensus 28 sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~----~~v-----~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~ 98 (120)
T 1ujt_A 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQN----LDA-----KVPTERSAVLVNLKKGVTYEIKVRPYFNE 98 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEE----EEC-----CCTTCCEEEEESCCSSEEEEEEEEEESSS
T ss_pred cCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEE----EEe-----cCCCcCEEEECCCCCCCEEEEEEEEECCC
Confidence 3589999999642111 126788776541 11110 000 111234678999999999999983
Q ss_pred -CCCCceeEEEECCCC
Q 011679 139 -SGDSSREFWFQTPPK 153 (479)
Q Consensus 139 -~~~~s~~~~f~T~p~ 153 (479)
.|..|....|+|+..
T Consensus 99 G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 99 FQGMDSESKTVRTTEE 114 (120)
T ss_dssp CCCCCCCCEEEEECSS
T ss_pred ccCCCCCCEEEECCCC
Confidence 345688888999754
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.26 E-value=0.037 Score=44.24 Aligned_cols=70 Identities=14% Similarity=0.214 Sum_probs=39.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC---CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG---PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
.|..+.+... ..+++.|+|.-....+ .-.|+|....+...... .. ...-...+.|+||+|++.|.
T Consensus 20 ~P~~l~~~~~--~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~----~~------~~~~~~~~~i~~L~p~t~Y~ 87 (118)
T 2yrz_A 20 TPTRLVFSAL--GPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRL----NI------PNPAQTSVVVEDLLPNHSYV 87 (118)
T ss_dssp CCCCCEECCC--BTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEE----EE------SCTTCCEEEEESCCTTCEEE
T ss_pred CCCceEEEeC--CCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEE----Ec------CCCCcCEEEeCCCCCCCEEE
Confidence 4666655432 3579999998765432 12355554333211111 00 01113356789999999999
Q ss_pred EEeCC
Q 011679 135 YKIGS 139 (479)
Q Consensus 135 Yrv~~ 139 (479)
+||.+
T Consensus 88 ~~V~A 92 (118)
T 2yrz_A 88 FRVRA 92 (118)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99954
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.19 E-value=0.13 Score=41.58 Aligned_cols=88 Identities=13% Similarity=0.067 Sum_probs=49.3
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeec---CCCCceEEEeEEEEEeeecceeceEEEEEeCCCCC
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTS---ADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p 129 (479)
..|..+.+.. ...+++.|.|.-..+.+. -.|+|... ....+..+. ... .......+.|+||+|
T Consensus 19 ~~P~~l~~~~--~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~-~~~-------~~~~~~~~~v~~L~p 88 (124)
T 1wis_A 19 GPPTNLGISN--IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIH-QLS-------NEPDARSMEVPDLNP 88 (124)
T ss_dssp CCCEEEEEES--CCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEE-EEE-------SCTTCSEEEECSCCT
T ss_pred ccCCCCEEEE--ecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEee-eEc-------cCCCceEEEeCCCCC
Confidence 3577766654 245799999965543322 35777652 222222111 100 011223577899999
Q ss_pred CCEEEEEeCC------CCCce-eEEEECCCCC
Q 011679 130 DTKYYYKIGS------GDSSR-EFWFQTPPKI 154 (479)
Q Consensus 130 ~t~Y~Yrv~~------~~~s~-~~~f~T~p~~ 154 (479)
++.|.+||.+ +..|. ...++|.+.+
T Consensus 89 ~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 89 FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp TSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred CCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 9999999853 23343 3457776643
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.085 Score=40.59 Aligned_cols=70 Identities=14% Similarity=0.267 Sum_probs=42.3
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
.|..+.+.... .+++.|+|.-.... ..-.|+|....+...... .... .-...+.|+||+|+|.|.+|
T Consensus 4 ~P~~l~v~~~~--~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~----~~~~------~~~~~~~i~~L~p~t~Y~~~ 71 (98)
T 3teu_A 4 APTDLQVTNVT--DTSITVSWTPPSATITGYRITYTPSNGPGEPKE----LTVP------PSSTSVTITGLTPGVEYVVS 71 (98)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTSCSCCEE----EEEC------TTCSEEEECSCCTTCEEEEE
T ss_pred CCCceEEEEec--CCEEEEEEeCCCCcccEEEEEEEECCCCCceEE----EEcC------CCcCEEEecCCCCCCEEEEE
Confidence 37777665433 47999999976422 223677775443211110 1110 12235778999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|.+
T Consensus 72 V~A 74 (98)
T 3teu_A 72 VYA 74 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.096 Score=41.19 Aligned_cols=70 Identities=16% Similarity=0.280 Sum_probs=40.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-CC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-PS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+.+... ..+++.|.|.-....+ .. .|+|.......+.... . .......+.|+||+|++.
T Consensus 10 ~P~~l~~~~~--~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~-~---------~~~~~~~~~v~~L~p~t~ 77 (110)
T 2yuw_A 10 PPTLLTVDSV--TDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVAN-K---------DLIDKTKFTITGLPTDAK 77 (110)
T ss_dssp CCEEEEEEEE--CSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECC-S---------SCCCSSEEEECSCCTTCE
T ss_pred CCCccEEEec--cCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEec-c---------ccCccCEEEECCCCCCCE
Confidence 4666666543 3579999999764322 22 4555544332211110 0 001123467899999999
Q ss_pred EEEEeCC
Q 011679 133 YYYKIGS 139 (479)
Q Consensus 133 Y~Yrv~~ 139 (479)
|.|||.+
T Consensus 78 Y~frV~A 84 (110)
T 2yuw_A 78 IFVRVKA 84 (110)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=95.17 E-value=0.2 Score=44.20 Aligned_cols=86 Identities=14% Similarity=0.165 Sum_probs=50.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-----GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+.+.... .++.|+|.-.... ..-.|+|............- . ...........|+||+|+|.
T Consensus 11 ~P~~~~~~~~~---~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~i~~L~p~t~ 80 (209)
T 2vkw_A 11 SPSIDQVEPYS---STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWY-----D--AKEASMEGIVTIVGLKPETT 80 (209)
T ss_dssp CCEEEEEEECS---SCEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEE-----E--HHHHHHHSEEEECCCCTTCE
T ss_pred CCcccEeeecc---CeEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEe-----e--ccCCCccceEEeCCCCCCCe
Confidence 47777765543 2689999987422 12357776554432221110 0 00001123567899999999
Q ss_pred EEEEeCC------CCCceeEEEECCCC
Q 011679 133 YYYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 133 Y~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
|.|||.. +..|....++|.+.
T Consensus 81 Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 81 YAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred EEEEEEEEcCCcccCCcccccccccCC
Confidence 9999953 24567777888764
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.063 Score=42.71 Aligned_cols=84 Identities=17% Similarity=0.167 Sum_probs=50.1
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
..|..+.+.. ..+++.++|.-..... .-.|+|.. .+..+..+... +. .-..+..|.+|.|++.
T Consensus 9 ~pP~~l~v~~---~~~sv~L~W~pP~~~~~~I~gY~vey~~-~~~~W~~~~~~---~~------~~~t~~~v~~L~pg~~ 75 (108)
T 1v5j_A 9 SPPRGLVAVR---TPRGVLLHWDPPELVPKRLDGYVLEGRQ-GSQGWEVLDPA---VA------GTETELLVPGLIKDVL 75 (108)
T ss_dssp CCCEEEEEEE---CSSSEEEEEECCSCCSSCCCBEEEEEEE-TTCCCEEEEEE---EC------SSCCEEECCCCCTTSC
T ss_pred CCCcceEEEE---eCCEEEEEECCCCCCCCCCcEEEEEEEe-CCCCcEEeeee---cC------CCcCEEEeCCCCCCCE
Confidence 3577777654 2468999999875422 23688877 33223222211 11 1123456899999999
Q ss_pred EEEEeCCC------CCceeEEEECCCC
Q 011679 133 YYYKIGSG------DSSREFWFQTPPK 153 (479)
Q Consensus 133 Y~Yrv~~~------~~s~~~~f~T~p~ 153 (479)
|.+||.+- ..|+...++|...
T Consensus 76 Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 76 YEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 99999542 2355556666543
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.05 E-value=0.17 Score=45.79 Aligned_cols=97 Identities=14% Similarity=0.178 Sum_probs=56.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+... ..+++.|+|.-.... ..-.|+|....+.......- . .....+.|+||+|+|.|.+|
T Consensus 8 ~P~~l~~~~~--~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~~---~--------~~~~~~~i~~L~p~t~Y~~~ 74 (234)
T 3f7q_A 8 APQNPNAKAA--GSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLL---D--------SKVPSVELTNLYPYCDYEMK 74 (234)
T ss_dssp CCEEEEEEEC--SSSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEE---E--------ESSSEEEECSCCTTCEEEEE
T ss_pred CCcceEEEEc--CCCEEEEEEECCCCccceEEEEEEECCCCccceEEE---c--------CCccEEEECCCCCCCEEEEE
Confidence 4777777653 357999999876322 22457777654432211110 0 11224678999999999999
Q ss_pred eCC------CCCceeEEEECCCC-CCCCCCeEEEEEec
Q 011679 137 IGS------GDSSREFWFQTPPK-IDPDASYKFGIIGD 167 (479)
Q Consensus 137 v~~------~~~s~~~~f~T~p~-~~~~~~~~f~~~gD 167 (479)
|.. +..|....++|.+. |..-..+++...++
T Consensus 75 V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~ 112 (234)
T 3f7q_A 75 VCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSS 112 (234)
T ss_dssp EEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSS
T ss_pred EEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecC
Confidence 853 24566778888643 22223455544433
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.02 E-value=0.26 Score=42.58 Aligned_cols=69 Identities=22% Similarity=0.307 Sum_probs=42.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
+|..+.+.... .+++.|.|....... .-.|+|.............. .-...+.+++|+|++.
T Consensus 8 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t~ 74 (197)
T 3lpw_A 8 PPQDLKVKEVT--KTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGCS 74 (197)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTCE
T ss_pred CCCCcEEEEec--CCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCCE
Confidence 47777666433 479999999863221 23577766554332222110 0123467899999999
Q ss_pred EEEEeCC
Q 011679 133 YYYKIGS 139 (479)
Q Consensus 133 Y~Yrv~~ 139 (479)
|.|||..
T Consensus 75 Y~~~V~a 81 (197)
T 3lpw_A 75 YYFRVLA 81 (197)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999953
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.01 E-value=0.25 Score=46.12 Aligned_cols=99 Identities=15% Similarity=0.140 Sum_probs=56.8
Q ss_pred CCCCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 56 HNSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 56 ~~~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
+.+|..+.+.... .+++.|+|.-.+.. ..-.|+|............ .. ..-...+.|+||+|++.|.
T Consensus 21 p~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~ 88 (290)
T 3r8q_A 21 IPAPTDLKFTQVT--PTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----NL------APDSSSVVVSGLMVATKYE 88 (290)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE----EE------CTTCCEEEECSCCSSCEEE
T ss_pred CCCCCceEEEECC--CCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE----Ec------CCCccEEEeCCCCCCCEEE
Confidence 3457777776543 47999999987432 2346777765432211110 11 1113356789999999999
Q ss_pred EEeCCC------CCceeEEEECCCCCCCCCCeEEEEEec
Q 011679 135 YKIGSG------DSSREFWFQTPPKIDPDASYKFGIIGD 167 (479)
Q Consensus 135 Yrv~~~------~~s~~~~f~T~p~~~~~~~~~f~~~gD 167 (479)
+||..- ..+ ...++|.+.+..-..+++...++
T Consensus 89 ~~V~a~~~~g~s~~s-~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 89 VSVYALKDTLTSRPA-QGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp EEEEEEETTEECCCE-EEEEECCCCCCCCEEEEEEEECS
T ss_pred EEEEEEeCCCCCCCc-ceeEecCCCCCCCceeEEEEcCC
Confidence 998541 223 45677765443223444444443
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.96 E-value=0.1 Score=41.55 Aligned_cols=82 Identities=15% Similarity=0.208 Sum_probs=47.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+++.. ...+++.|+|.-.... ..-.|+|........ . .... .-...+.|+||+|+|.|.++
T Consensus 10 ~P~~l~~~~--~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~-~-----~~v~------~~~t~~~l~~L~P~t~Y~~~ 75 (115)
T 2cuh_A 10 GPTQLRALN--LTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-Q-----AETP------GSAVDYPLHDLVLHTNYTAT 75 (115)
T ss_dssp SCEEEECCC--CSSSCEEEEEECCSSCCSEEEEEEECSSSCCE-E-----EEEE------TTCSEEEECSCCSSSEEEEE
T ss_pred CCcceEEEe--ccCCeEEEEEECCCCCccEEEEEEEcCCCCcE-E-----EEEC------CCccEEEEeCCCCCCEEEEE
Confidence 466655543 3468999999865332 123577765432111 0 0100 11235789999999999999
Q ss_pred eCCC-----CCceeEEEECCCC
Q 011679 137 IGSG-----DSSREFWFQTPPK 153 (479)
Q Consensus 137 v~~~-----~~s~~~~f~T~p~ 153 (479)
|..- .......|+|.+.
T Consensus 76 V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 76 VRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp EEEEETTEECCCEEEEEESCCC
T ss_pred EEEEeCCCcCCCEEEEEEeCCC
Confidence 8541 2234567888754
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.96 E-value=0.071 Score=42.60 Aligned_cols=59 Identities=17% Similarity=0.223 Sum_probs=36.0
Q ss_pred CCcEEEEEEcCC-C----CCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC
Q 011679 71 GKAVIISWVTPH-E----PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (479)
Q Consensus 71 ~~~~~v~W~t~~-~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~ 139 (479)
.+++.|.|.... + ...-.|+|....+..+..+... ....-.+.|+||+|++.|.|||.+
T Consensus 24 ~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~----------~~~~~~~~v~~L~p~t~Y~frV~A 87 (112)
T 1bpv_A 24 RHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS----------NILENEFTVSGLTEDAAYEFRVIA 87 (112)
T ss_dssp TTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS----------CCCSSEEEECSCCSSCCEEEEEEE
T ss_pred CCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc----------cCccCEEEECCCCCCCEEEEEEEE
Confidence 479999998542 1 1234788876554333221100 001123568999999999999954
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.93 E-value=0.084 Score=42.23 Aligned_cols=70 Identities=11% Similarity=0.258 Sum_probs=38.7
Q ss_pred CCceE--EEEeecCCCCcEEEEEEcCCCCCCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQV--HITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v--~l~~~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+ .+. ....+++.|.|.-..+.... .|+|.... ..+..... . ...-...+.|+||+|++
T Consensus 20 ~P~~~~~~~~--~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~---~------~~~~~~~~~v~~L~p~t 87 (121)
T 1wf5_A 20 APEHPVATLS--TVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLLA---S------VDPKATSVTVKGLVPAR 87 (121)
T ss_dssp CCSSCEEEEC--SSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEES---S------CCTTCCEEEEESCCTTC
T ss_pred cCCCcceeeE--eccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeEc---c------cCCCccEEEECCcCCCC
Confidence 45555 333 23357999999876433333 34454432 11111100 0 01122356789999999
Q ss_pred EEEEEeCC
Q 011679 132 KYYYKIGS 139 (479)
Q Consensus 132 ~Y~Yrv~~ 139 (479)
.|.|||..
T Consensus 88 ~Y~frV~A 95 (121)
T 1wf5_A 88 SYQFRLCA 95 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999954
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.93 E-value=0.075 Score=42.46 Aligned_cols=83 Identities=16% Similarity=0.279 Sum_probs=49.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEee----cCCCCc--eEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGT----SADKFD--FTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+..- ..+++.|+|.........+..|.. ..+... .... ...-...+.|++|+|+|
T Consensus 21 ~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t 87 (121)
T 2dlh_A 21 APRDVQARML--SSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKH-----------NVADSQITTIGNLVPQK 87 (121)
T ss_dssp CCEEEEECCC--SSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCC-----------CCSSCSEECCBSCCSSC
T ss_pred CCcccEEEec--CCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEE-----------ecCCceEEEecCCCCCC
Confidence 4666665442 357999999987544333434433 222110 0000 00112356889999999
Q ss_pred EEEEEeCC------CCCceeEEEECCCC
Q 011679 132 KYYYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
.|.+||.. +.+|....|+|.+.
T Consensus 88 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 88 TYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 99999943 35677889999764
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.91 E-value=0.31 Score=42.96 Aligned_cols=98 Identities=13% Similarity=0.219 Sum_probs=53.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
.|..+.+... ..+++.|+|.-.... ..-.|+|....+....... ... .-...+.|+||+|++.|.+
T Consensus 25 ~P~~l~~~~~--~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~----~~~------~~~~~~~i~~L~p~t~Y~~ 92 (203)
T 2gee_A 25 QPTDLSFVDI--TDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED----FVD------SSVGYYTVTGLEPGIDYDI 92 (203)
T ss_dssp CCEEEEEECC--TTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE----EEE------TTCCEEEECSCCTTCEEEE
T ss_pred CCCccEEEec--CCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE----EcC------CCccEEEeCCCCCCCEEEE
Confidence 4666665543 357999999987531 1235777765543221110 000 1122567899999999999
Q ss_pred EeCC---CCCceeEEEECCCCCCCCCCeEEEEEec
Q 011679 136 KIGS---GDSSREFWFQTPPKIDPDASYKFGIIGD 167 (479)
Q Consensus 136 rv~~---~~~s~~~~f~T~p~~~~~~~~~f~~~gD 167 (479)
+|.. .+.|....+.+.+.+.....+++...++
T Consensus 93 ~V~a~~~~g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 93 SVYTVKNGGESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp EEEEESSSCBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred EEEEEeCCCccccEeeeecCCCcCCCceEEEEcCC
Confidence 9854 2334444444433222223455555444
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=94.91 E-value=0.12 Score=40.70 Aligned_cols=71 Identities=18% Similarity=0.271 Sum_probs=39.4
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
.+|..+.+.... ..+++.++|.-..+...-.|......+... ...++... .. ....++|+||++|+|+
T Consensus 6 ~aP~~l~a~~~~-~~~~v~LsW~~~~~~~~Y~VyR~~~~~~~~-~~i~~~~~------~t----sy~d~~l~~g~~Y~Y~ 73 (103)
T 3mpc_A 6 AFPTGLSAVLDS-SGNTANLTWNAAPGANSYNVKRSTKSGGPY-TTIATNIT------ST----NYTDTGVATGTKYYYV 73 (103)
T ss_dssp CCCEEEEEEECT-TSCCEEEEEECCTTCSEEEEEEESSTTCCC-EEEEEEEC------SS----EEEETTCCTTCCCEEE
T ss_pred CCCceeEEEEeC-CCCEEEEEEECCCCCCEEEEEEecCCCCCc-EEEeecCC------CC----EEEECCCCCCCEEEEE
Confidence 457777665532 246899999986543333444433322211 11111000 11 2245899999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|..
T Consensus 74 V~A 76 (103)
T 3mpc_A 74 VSA 76 (103)
T ss_dssp EEE
T ss_pred EEE
Confidence 953
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.91 E-value=0.041 Score=43.83 Aligned_cols=70 Identities=16% Similarity=0.206 Sum_probs=39.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+... ..+++.|.|........ -.|+|....+....... .. . . -...+.|++|+|++.|
T Consensus 18 ~P~~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~-~----~--~~~~~~i~~L~p~t~Y 85 (117)
T 1uem_A 18 PPSKPQVTDV--TKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTV---AN-H----V--KTTLYTVRGLRPNTIY 85 (117)
T ss_dssp CCCCCEEEEE--CSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEE---EE-E----E--CSSEEEECSCCTTCEE
T ss_pred CCCCCEEEEe--cCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEc---cc-c----c--CcCEEEECCCCCCCEE
Confidence 4666666533 34799999987643222 34566543311100000 00 0 0 1224678999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
.|||.+
T Consensus 86 ~frV~A 91 (117)
T 1uem_A 86 LFMVRA 91 (117)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.91 E-value=0.19 Score=40.16 Aligned_cols=69 Identities=20% Similarity=0.291 Sum_probs=35.2
Q ss_pred CCCcEEEEEEcCCCCCCC----EEEEeecC-CCCceEEEeEEEEEeee--cceeceEEEEEeCCCCCCCEEEEEeCC
Q 011679 70 DGKAVIISWVTPHEPGPS----TVSYGTSA-DKFDFTAEGTVNNYTFY--KYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (479)
Q Consensus 70 ~~~~~~v~W~t~~~~~~~----~v~y~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~v~l~gL~p~t~Y~Yrv~~ 139 (479)
..++++|.|.-..+.+.. .|+|.... ...+..+. ....+... ....+-...+.|+||+|++.|.+||.+
T Consensus 15 ~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 15 SDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTN-DNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp C---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEE-EEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred eCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECc-ccccccccccccccCceeEEEeCCCCCCCEEEEEEEE
Confidence 358999999987555544 45555542 22222221 11110000 000112346788999999999999954
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.081 Score=42.52 Aligned_cols=70 Identities=23% Similarity=0.332 Sum_probs=43.3
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+.+..-. .+++.|.|.-....+ .-.|+|.......+..+... .....+.|++|+|++.
T Consensus 20 ~P~~l~~~~~~--~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~-----------~~~~~~~v~~L~p~t~ 86 (120)
T 2yux_A 20 PPQIVKIEDVW--GENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEH-----------YHRTSATITELVIGNE 86 (120)
T ss_dssp CCSCEEEEEEE--TTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESS-----------CCSSCCEECCCCSSEE
T ss_pred cCCCCEEEEec--CCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeec-----------CCcCEEEECCCCCCCE
Confidence 47777665433 479999998764322 24677776554333222110 1122357899999999
Q ss_pred EEEEeCCC
Q 011679 133 YYYKIGSG 140 (479)
Q Consensus 133 Y~Yrv~~~ 140 (479)
|.|||.+-
T Consensus 87 Y~frV~A~ 94 (120)
T 2yux_A 87 YYFRVFSE 94 (120)
T ss_dssp EEEEECCC
T ss_pred EEEEEEEe
Confidence 99999653
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.82 E-value=0.15 Score=41.15 Aligned_cols=87 Identities=13% Similarity=0.117 Sum_probs=49.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcC--CCCCCCE----EEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTP--HEPGPST----VSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~--~~~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+... ...+++.|+|.-. ......+ |+|........ ....... ..-...+.|+||.|++
T Consensus 21 ~P~~~~~~~~-~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~----~~~~~~~-----~~~~~~~~l~~L~p~t 90 (124)
T 2dbj_A 21 APLNVTVFLN-ESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGIS----KELLEEV-----GQNGSRARISVQVHNA 90 (124)
T ss_dssp CCEEEEEEEC-SSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEE----EEEEEEE-----ESTTSCEEEECCCSSS
T ss_pred CCcceEEEec-CCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCc----cceEEEe-----CCCcceEEecCCCCCC
Confidence 4777766532 2357999999987 3332233 44432111100 0000000 0112356789999999
Q ss_pred EEEEEeCC------CCCceeEEEECCCCC
Q 011679 132 KYYYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
.|.+||.+ +.+|....++|++..
T Consensus 91 ~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 91 TCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp EEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 99999943 457888999997653
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=94.78 E-value=0.13 Score=45.61 Aligned_cols=83 Identities=22% Similarity=0.247 Sum_probs=48.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCC-CC----CCCEEEEeecCC-CCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPH-EP----GPSTVSYGTSAD-KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~-~~----~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+.. ...+++.|.|.-.. .. ..-.|+|..... ....... . .........|+||+|++
T Consensus 118 ~P~~~~~~~--~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~-----~~~~~~~~~i~~L~p~t 185 (214)
T 2ibg_A 118 VPELLEIEE--YSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT-----I-----EGAHARSFKIAPLETAT 185 (214)
T ss_dssp CCEECCCBC--CSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE-----E-----ECTTCCEEEECSCCTTC
T ss_pred CCcccEEEE--ccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEee-----c-----cCCcceEEEeCCCCCCC
Confidence 355544332 23578999999874 11 123577765544 1111111 0 01112245789999999
Q ss_pred EEEEEeCC------CCCceeEEEECCC
Q 011679 132 KYYYKIGS------GDSSREFWFQTPP 152 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~p 152 (479)
.|.|||.. +..|....++|..
T Consensus 186 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 186 MYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCcceEeeEecC
Confidence 99999943 3567888888863
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.74 E-value=0.15 Score=44.03 Aligned_cols=85 Identities=16% Similarity=0.149 Sum_probs=48.2
Q ss_pred CCCCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 56 HNSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 56 ~~~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
+..|..+.+..- ..+++.|+|.-.... ..-.|+|....+...... ... .-...+.|+||+|++.|.
T Consensus 95 p~~P~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~ 161 (186)
T 1qr4_A 95 VGSPKGISFSDI--TENSATVSWTPPRSRVDSYRVSYVPITGGTPNVV-----TVD------GSKTRTKLVKLVPGVDYN 161 (186)
T ss_dssp CCCCSCEEEESC--CSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEE-----EEE------TTCCEEEECSCCSSCEEE
T ss_pred CCCCCccEEEEe--CCCEEEEEEECCCCcccEEEEEEEeCCCCCceEE-----EcC------CCcCEEEEcCCCCCCEEE
Confidence 345666666543 358999999865432 223567765543211111 110 112356789999999999
Q ss_pred EEeCCC-----CCceeEEEECCCC
Q 011679 135 YKIGSG-----DSSREFWFQTPPK 153 (479)
Q Consensus 135 Yrv~~~-----~~s~~~~f~T~p~ 153 (479)
++|... .......|+|.|.
T Consensus 162 ~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 162 VNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp EEEEEEETTEECCCEEEEEEC---
T ss_pred EEEEEEcCCCcCcCEEEEEEecCC
Confidence 999542 2234567778763
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=94.58 E-value=0.11 Score=46.07 Aligned_cols=88 Identities=17% Similarity=0.190 Sum_probs=51.0
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+.......+++.|+|........ -.|+|....+.......-. + ...-...+.|+||+|+|.|
T Consensus 106 pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~-------~-~~~~~~~~~i~~L~p~t~Y 177 (215)
T 1bqu_A 106 PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE-------D-TASTRSSFTVQDLKPFTEY 177 (215)
T ss_dssp CCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG-------G-GCSCCSEEEECSCCSSEEE
T ss_pred CCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc-------c-ccCccceEEeCCCCCCCEE
Confidence 57777665432235799999987643222 3566665543222111000 0 0112235678999999999
Q ss_pred EEEeCC------C---CCceeEEEECCCC
Q 011679 134 YYKIGS------G---DSSREFWFQTPPK 153 (479)
Q Consensus 134 ~Yrv~~------~---~~s~~~~f~T~p~ 153 (479)
.+||.+ + .+|....++|.+.
T Consensus 178 ~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 178 VFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp EEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred EEEEEEccCCCCCccCCCCCccccccccc
Confidence 999843 2 2567778888653
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.54 E-value=0.61 Score=36.28 Aligned_cols=82 Identities=16% Similarity=0.214 Sum_probs=48.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
.|..+++.. ...+++.|+|.-....- .-.|+|....+. .. .. .. ..-...+.|+||+|+|.|.++
T Consensus 10 ~P~~l~v~~--~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~~-~~----~~-~~------~~~~ts~~l~~L~p~t~Y~~~ 75 (105)
T 2cum_A 10 APRDLEAKE--VTPRTALLTWTEPPVRPAGYLLSFHTPGGQ-TQ----EI-LL------PGGITSHQLLGLFPSTSYNAR 75 (105)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEECTTSC-EE----EE-EE------CSSCSEEEECSCCTTCEEEEE
T ss_pred CCCceEEEe--ccCCEEEEEEcCCCCccceEEEEEEeCCCc-eE----EE-EE------CCCccEEEECCCCCCCEEEEE
Confidence 477666654 34589999998764322 235777654331 11 11 10 112235788999999999999
Q ss_pred eCCC-----CCceeEEEECCCC
Q 011679 137 IGSG-----DSSREFWFQTPPK 153 (479)
Q Consensus 137 v~~~-----~~s~~~~f~T~p~ 153 (479)
|..- ..+....|+|...
T Consensus 76 V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 76 LQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp EEEEBTTBCCCCEEEEEECCCS
T ss_pred EEEEeCCcccCCEEEEEEeCCc
Confidence 8541 2234567887543
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.49 E-value=0.097 Score=41.29 Aligned_cols=70 Identities=14% Similarity=0.229 Sum_probs=41.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+.+.... .+++.|+|.-....+ .-.|+|.......+.... . ...-...+.|++|+|++.
T Consensus 11 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~-~---------~~~~~~~~~v~~L~p~t~ 78 (111)
T 1x5y_A 11 APQHLTVEDVT--DTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN-K---------EPVERCGFTVKDLPTGAR 78 (111)
T ss_dssp CCEEEEEEEEC--SSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS-S---------SCBSSSEEEEECCCTTCC
T ss_pred CCCCCEEEecc--CCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEcc-c---------cCCcccEEEECCCCCCCE
Confidence 47777666533 479999999764322 235666554432221110 0 001123467899999999
Q ss_pred EEEEeCC
Q 011679 133 YYYKIGS 139 (479)
Q Consensus 133 Y~Yrv~~ 139 (479)
|.|||.+
T Consensus 79 Y~frV~A 85 (111)
T 1x5y_A 79 ILFRVVG 85 (111)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.40 E-value=0.052 Score=43.78 Aligned_cols=88 Identities=17% Similarity=0.242 Sum_probs=49.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--CC----CCEEEEeecCCCCce--E-EEeEEEEEeeecceeceEEEEEeCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--PG----PSTVSYGTSADKFDF--T-AEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~v~l~gL~ 128 (479)
.|..+.+..-. .+++.|+|.-... .. .-.|+|....+.... . .......+. .-...+.|+||+
T Consensus 17 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~L~ 88 (125)
T 1uen_A 17 APGNVRVNVVN--STLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQ------GSKTHGMLPGLE 88 (125)
T ss_dssp CCSSCEEEEEE--TTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEE------SSCSEEEEESCC
T ss_pred CCceeEEEecC--CcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEec------CCccEEEeCCCC
Confidence 46666665432 4799999987521 11 134566554432210 0 000111111 122356789999
Q ss_pred CCCEEEEEeCC------CCCceeEEEECCCC
Q 011679 129 YDTKYYYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 129 p~t~Y~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
|+|.|.+||.. +.+|....|+|.+.
T Consensus 89 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 89 PFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 99999999853 24577788888754
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=94.38 E-value=0.18 Score=39.10 Aligned_cols=70 Identities=14% Similarity=0.254 Sum_probs=42.3
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC---CCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE---PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~---~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
+|..+++..- ..+++.|.|.-... ...-.|+|....+..... ....+ .-...+.|+||+|+|.|.
T Consensus 7 ~P~~l~v~~~--t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~----~~~v~------~~~t~~~l~~L~p~t~Y~ 74 (101)
T 3k2m_C 7 VPTKLEVVAA--TPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQ----EFTVP------YSSSTATISGLSPGVDYT 74 (101)
T ss_dssp SSCEEEEEEE--ETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCE----EEEEE------TTCCEEEECSCCTTCEEE
T ss_pred CCcceEEeec--CCCEEEEEecCCCCCCceeeEEEEEEECCCCCccE----EEEcC------CCccEEEECCCCCCCEEE
Confidence 4777777643 35799999987641 112357777654321110 00111 112367899999999999
Q ss_pred EEeCC
Q 011679 135 YKIGS 139 (479)
Q Consensus 135 Yrv~~ 139 (479)
.+|..
T Consensus 75 ~~V~A 79 (101)
T 3k2m_C 75 ITVYA 79 (101)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99854
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=94.37 E-value=0.16 Score=40.61 Aligned_cols=70 Identities=16% Similarity=0.350 Sum_probs=43.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
.|..+.+..-. .+++.|+|...... ..-.|+|....+..... ....+ .-.-.+.|+||+|+|.|..+
T Consensus 6 ~P~~L~v~~~t--~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~----~~~v~------~~~ts~~l~gL~P~T~Y~v~ 73 (114)
T 3qwq_B 6 VPRDLEVVAAT--PTSLLISWDSGRGSYQYYRITYGETGGNSPVQ----EFTVP------GPVHTATISGLKPGVDYTIT 73 (114)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSCCCSEEEEEEEESSCSSCCE----EEEEE------TTCCEEEECSCCTTCEEEEE
T ss_pred CCCceEEEecC--CCEEEEEEcCCcCcccEEEEEEEECCCCCccE----EEEeC------CCcCEEEeCCCCCCCEEEEE
Confidence 47777776533 57999999876432 22467787655421100 01111 11235789999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|..
T Consensus 74 V~A 76 (114)
T 3qwq_B 74 VYA 76 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 853
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.24 E-value=0.36 Score=42.36 Aligned_cols=83 Identities=18% Similarity=0.165 Sum_probs=47.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCC-CceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+.+.. ..+++.|+|.-..+... -.|+|....+. .+....... + . -.....+ +|+|+|.
T Consensus 8 ~P~~~~~~~---~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~---~----~--~~~~~~~-~L~p~t~ 74 (205)
T 1cfb_A 8 APKLTGITC---QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---P----N--TDSSFVV-QMSPWAN 74 (205)
T ss_dssp CCEEEEEEE---CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEE---E----T--TCSEEEE-ECCSSEE
T ss_pred CCCCcEEEe---cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeecc---C----C--CceEEEE-eCCCCCE
Confidence 577777766 35899999997643322 35777654322 121111111 0 0 1112345 9999999
Q ss_pred EEEEeCC------CCCc-eeEEEECCCC
Q 011679 133 YYYKIGS------GDSS-REFWFQTPPK 153 (479)
Q Consensus 133 Y~Yrv~~------~~~s-~~~~f~T~p~ 153 (479)
|.+||.+ +..| ....++|.+.
T Consensus 75 Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 75 YTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 9999853 2345 4466777654
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=94.22 E-value=0.19 Score=47.44 Aligned_cols=87 Identities=17% Similarity=0.190 Sum_probs=52.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+...+...+++.|+|.-...... -.|+|.......+..+.-. + ...-...+.|++|+|+|.|
T Consensus 202 pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~-------~-~~~~~~~~~l~~L~p~t~Y 273 (303)
T 1i1r_A 202 PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE-------D-TASTRSSFTVQDLKPFTEY 273 (303)
T ss_dssp CCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG-------G-GCSCCSEEEECSCCTTCEE
T ss_pred CCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc-------c-CCCceeEEEeCCCCCCCEE
Confidence 47777665433345899999997643222 3567766543222211100 0 0112235678999999999
Q ss_pred EEEeCC------C---CCceeEEEECCC
Q 011679 134 YYKIGS------G---DSSREFWFQTPP 152 (479)
Q Consensus 134 ~Yrv~~------~---~~s~~~~f~T~p 152 (479)
.+||.+ | .||+...|+|+.
T Consensus 274 ~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 274 VFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 999843 2 467888898864
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=94.18 E-value=0.14 Score=52.82 Aligned_cols=83 Identities=22% Similarity=0.322 Sum_probs=48.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+.. ...+++.|+|.-.+.+.. -.|+|....+..... ... .-...+.|+||+|+|.|
T Consensus 443 ~Ps~~~~~~--~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~------~v~------~~~ts~~l~gL~P~T~Y 508 (536)
T 3fl7_A 443 EPPKVRLEG--RSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYN------VRR------TEGFSVTLDDLAPDTTY 508 (536)
T ss_dssp CCCEEEEEE--CCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCE------EEE------ESSSEEECCSCCSSCEE
T ss_pred CCCCCceee--ccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEE------EEc------CCCCEEEECCCCCCCEE
Confidence 466655522 235899999997643322 357776554331100 000 11224678999999999
Q ss_pred EEEeCC------CCCceeEEEECCCCC
Q 011679 134 YYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
.+||.. +.+|+...|+|++..
T Consensus 509 ~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 509 LVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp EEEEEEECC---CEECCCEEEECCC--
T ss_pred EEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 999953 346888999998653
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.15 E-value=0.26 Score=37.44 Aligned_cols=69 Identities=19% Similarity=0.356 Sum_probs=40.5
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEe
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKI 137 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv 137 (479)
|..+++..-. .+++.|+|.-.... ..-.|+|....+. ....... ...-...+.|+||+|+|.|.++|
T Consensus 5 P~~l~~~~~~--~~si~lsW~~p~~~i~~Y~v~y~~~~~~-------~~~~~~~---~~~~~~~~~l~~L~p~t~Y~~~V 72 (94)
T 1j8k_A 5 PKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDG-------IHELFPA---PDGEEDTAELQGLRPGSEYTVSV 72 (94)
T ss_dssp CCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTE-------EEEECCC---CCSSCCEEEECSCCCCSEEEEEE
T ss_pred CCccEEEeec--CCEEEEEEcCCCCCcceEEEEEEeCCCC-------CceEEec---CCCCccEEEeCCCCCCCEEEEEE
Confidence 5666665433 47999999765322 2346777654431 0000000 01123467899999999999999
Q ss_pred CC
Q 011679 138 GS 139 (479)
Q Consensus 138 ~~ 139 (479)
..
T Consensus 73 ~A 74 (94)
T 1j8k_A 73 VA 74 (94)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=94.03 E-value=0.44 Score=42.10 Aligned_cols=83 Identities=13% Similarity=0.119 Sum_probs=52.4
Q ss_pred CCceEEEEeec--CCCCcEEEEEEcCCCCC--------CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCC
Q 011679 58 SPQQVHITQGD--YDGKAVIISWVTPHEPG--------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (479)
Q Consensus 58 ~P~~v~l~~~~--~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL 127 (479)
.|..+.+.... ...+++.|+|....... .-.|+|....+...... . . .-...+.|.+|
T Consensus 105 pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~----~--~------~~~~~~~l~~L 172 (210)
T 3n06_B 105 PPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIH----F--A------GQQTEFKILSL 172 (210)
T ss_dssp CCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEE----E--E------ETCSEEEECCC
T ss_pred CCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEE----e--c------cCceEEEEecc
Confidence 57777776542 23478999999864322 12466665544322111 0 0 01225678999
Q ss_pred CCCCEEEEEeCC-------CCCceeEEEECCC
Q 011679 128 EYDTKYYYKIGS-------GDSSREFWFQTPP 152 (479)
Q Consensus 128 ~p~t~Y~Yrv~~-------~~~s~~~~f~T~p 152 (479)
+|++.|..||.+ +.||+...|+|+.
T Consensus 173 ~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 173 HPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp CTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred CCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 999999999853 3578899999953
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.97 E-value=0.19 Score=40.64 Aligned_cols=71 Identities=15% Similarity=0.330 Sum_probs=43.5
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
.+|..+.+..- ..+++.|+|.-.... ..-.|+|....+..... ....+ .-.-.+.|+||+|+|.|.+
T Consensus 30 ~~P~~l~v~~~--t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~----~~~v~------~~~t~~~l~gL~P~t~Y~~ 97 (121)
T 2ocf_D 30 DVPTKLEVVAA--TPTSLLISWDAPAVTVRYYRITYGETGGNSPVQ----EFTVP------GSKSTATISGLKPGVDYTI 97 (121)
T ss_dssp CSCEEEEEEEE--CSSCEEEEEECCSSCCCEEEEEEEETTTCSCBE----EEEEE------TTCCEEEECCCCTTCEEEE
T ss_pred CCCCccEEEec--CCCEEEEEEcCCCCCCcEEEEEEEECCCCCccE----EEEeC------CCcCEEEeCCCCCCCEEEE
Confidence 35777777654 358999999876422 22367777654422110 01111 1123578899999999999
Q ss_pred EeCC
Q 011679 136 KIGS 139 (479)
Q Consensus 136 rv~~ 139 (479)
+|..
T Consensus 98 ~V~A 101 (121)
T 2ocf_D 98 TVYA 101 (121)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=93.92 E-value=0.083 Score=46.88 Aligned_cols=87 Identities=25% Similarity=0.444 Sum_probs=51.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+...+...+++.|+|.-...... -.|+|....+...... ...... .-...+.|+||+|++.|
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~~------~~~~~~~i~~L~p~t~Y 179 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDW--VIEPVV------GNRLTHQIQELTLDTPY 179 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGS--EEEEEE------SSCSEEEECCCCTTCEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCce--EEEEec------CCeeEEEEcCCCCCCEE
Confidence 57777776553224799999997643322 2566665443221100 000110 11235678999999999
Q ss_pred EEEeCC------CCCceeEEEECCC
Q 011679 134 YYKIGS------GDSSREFWFQTPP 152 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p 152 (479)
.+||.. +.+|+...|+|..
T Consensus 180 ~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 180 YFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp EEEEEEEETTEECCCCCCEEEECC-
T ss_pred EEEEEEEcCCccCCCCCCEEccCcc
Confidence 999943 3567788888753
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=93.87 E-value=0.38 Score=37.03 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=41.9
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCCC-CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEe
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEPG-PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKI 137 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv 137 (479)
|..+.+.. ...+++.|+|.....+- .-.|+|....+..... ..... .-.-.+.|+||+|+|.|.++|
T Consensus 5 P~~l~v~~--~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~----~~~~~------~~~t~~~l~gL~P~t~Y~~~V 72 (98)
T 3tes_A 5 PKNLVVSE--VTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAI----NLTVP------GSERSYDLTGLKPGTEYTVSI 72 (98)
T ss_dssp CEEEEEES--CCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCE----EEEEE------TTCSEEEECSCCTTCEEEEEE
T ss_pred CCceEEEe--cCCCeEEEEecCCcCccceEEEEEEECCCCCceE----EEEcC------CCcCEEEECCCCCCCEEEEEE
Confidence 66666653 34689999999775332 2367787654211110 01111 112357899999999999998
Q ss_pred CC
Q 011679 138 GS 139 (479)
Q Consensus 138 ~~ 139 (479)
.+
T Consensus 73 ~A 74 (98)
T 3tes_A 73 YG 74 (98)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.83 E-value=0.16 Score=39.65 Aligned_cols=70 Identities=16% Similarity=0.297 Sum_probs=42.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+++..- ..+++.|+|.-..... .-.|+|.......... ....+ .-...+.|+||+|+|.|
T Consensus 10 ~P~~l~v~~~--t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~----~~~v~------~~~ts~~l~~L~p~t~Y 77 (103)
T 3t04_D 10 VPTKLEVVDA--TPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ----EFTVP------GYYSTATISGLKPGVDY 77 (103)
T ss_dssp CCCSCEEEEE--ETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE----EEEEE------TTCCEEEECSCCTTCCE
T ss_pred CCceeEEEec--CCCEEEEEccCCCCCCCccceEEEEEEECCCCCccE----EEEcC------CCcCEEEeCCCCCCCEE
Confidence 4677777543 3589999998765321 2367787653221110 00110 11335789999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
..+|..
T Consensus 78 ~~~V~A 83 (103)
T 3t04_D 78 TITVYA 83 (103)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999853
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.58 E-value=0.25 Score=37.36 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=49.3
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCC--CCCEEEEeecCCCC-ceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
..|.|+.++....-.++-.|.|.....+ ..-.+.|....... +..+ . -.++...-+|+||+||..|
T Consensus 6 ~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~-----~------Ip~h~nSYtI~GL~P~~~Y 74 (98)
T 1oww_A 6 SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA-----T------IPGHLNSYTIKGLKPGVVY 74 (98)
T ss_dssp CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEE-----E------ECSSCCEEEECSCCSSEEE
T ss_pred CcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEE-----E------ecCccceEEEecCCCCcEE
Confidence 3466666655444468899999987532 22345555544321 1111 1 1235556689999999999
Q ss_pred EEEeCCC---CCce--eEEEEC
Q 011679 134 YYKIGSG---DSSR--EFWFQT 150 (479)
Q Consensus 134 ~Yrv~~~---~~s~--~~~f~T 150 (479)
.=++-+- ++++ .+.|.|
T Consensus 75 E~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 75 EGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEEEEEESSSCEEEEEEEEEE
T ss_pred EEEEEEeeccCcccceEEEEEe
Confidence 9998542 3443 555555
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=93.51 E-value=0.46 Score=42.03 Aligned_cols=85 Identities=13% Similarity=0.085 Sum_probs=50.5
Q ss_pred CCceEEEEeecC----CCCcEEEEEEcCCCCCC----CEEEEe-ecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCC
Q 011679 58 SPQQVHITQGDY----DGKAVIISWVTPHEPGP----STVSYG-TSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (479)
Q Consensus 58 ~P~~v~l~~~~~----~~~~~~v~W~t~~~~~~----~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~ 128 (479)
.|..+.+....+ ..+++.|.|......+. -.|+|. ...+.....+. .. ......+.|.+|+
T Consensus 111 pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~----~~------~~~~~~~~l~~L~ 180 (215)
T 1cd9_B 111 PPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVF----HL------PSSKDQFELCGLH 180 (215)
T ss_dssp CCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEE----EE------ESCEEEEEECCCC
T ss_pred CCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEe----cc------cCcceEEEEcCCC
Confidence 466665544211 35789999987643222 356776 44333222211 00 0123457899999
Q ss_pred CCCEEEEEeCC------C---CCceeEEEECCC
Q 011679 129 YDTKYYYKIGS------G---DSSREFWFQTPP 152 (479)
Q Consensus 129 p~t~Y~Yrv~~------~---~~s~~~~f~T~p 152 (479)
|+|.|..||.+ | .||....|+|+.
T Consensus 181 p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 181 QAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp SCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred CCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 99999999842 2 468888888864
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.46 E-value=0.32 Score=42.97 Aligned_cols=88 Identities=15% Similarity=0.202 Sum_probs=49.3
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+.+... ..++.+.|...... +.. .|+|.......+....-.. . .........|.+|+|++.
T Consensus 116 ~p~~~~~~~~---~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~-----~--~~~~~~~l~i~~L~~~~~ 185 (215)
T 3mtr_A 116 SPSIDQVEPY---SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA-----K--EASMEGIVTIVGLKPETT 185 (215)
T ss_dssp CCEEEEEEEE---TTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEH-----H--HHHHHTEEEEECCCTTCE
T ss_pred CCcceEEEEe---cceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccc-----c--cccccccEEECCCCCCCE
Confidence 4555544322 36789999855322 222 3666655543322111000 0 000113567899999999
Q ss_pred EEEEeCC------CCCceeEEEECCCCCC
Q 011679 133 YYYKIGS------GDSSREFWFQTPPKID 155 (479)
Q Consensus 133 Y~Yrv~~------~~~s~~~~f~T~p~~~ 155 (479)
|.|||.. +..|....|+|+|..+
T Consensus 186 y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 186 YAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp EEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred EEEEEEEEeCCcccCcccceeeEeccccC
Confidence 9999943 3567888899988653
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=93.39 E-value=0.22 Score=38.25 Aligned_cols=70 Identities=14% Similarity=0.307 Sum_probs=42.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
.|..+++..- ..+++.|+|...... ..-.|+|....+..... ....+ .-...+.|+||+|+|.|..+
T Consensus 7 ~P~~l~v~~~--t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~----~~~v~------~~~t~~~l~~L~p~t~Y~v~ 74 (97)
T 3qht_C 7 VPTKLEVVAA--TPTSLLISWDASSSSVSYYRITYGETGGNSPVQ----EFTVP------GSSSTATISGLSPGVDYTIT 74 (97)
T ss_dssp SSSSCEEEEE--ETTEEEEECCCCCSSCCEEEEEEEESSSCSCCE----EEEEE------TTCCEEEECSCCTTCEEEEE
T ss_pred CCCceEEEec--CCCEEEEEEeCCCCCCCEEEEEEEECCCCCccE----EEEeC------CCcCEEEeCCCCCCCEEEEE
Confidence 4666666543 357999999865322 12367777654431110 01111 11335789999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|..
T Consensus 75 V~A 77 (97)
T 3qht_C 75 VYA 77 (97)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=93.29 E-value=0.3 Score=42.98 Aligned_cols=70 Identities=13% Similarity=0.225 Sum_probs=41.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
.|..+++..-. .+++.|+|...... ..-.|.|.......... ....+ .-...+.|+||+|+|.|.++
T Consensus 106 ~P~~l~v~~~t--~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~----~~~v~------~~~t~~~l~gL~p~t~Y~~~ 173 (195)
T 2qbw_A 106 VPTNLEVVAAT--PTSLLISWDASYYGVSYYRITYGETGGNSPVQ----EFTVP------YSSSTATISGLKPGVDYTIT 173 (195)
T ss_dssp SSCCCEEEEEE--TTEEEEECCCCCSSCSEEEEEEEETTCCSCCE----EEEEE------TTCSEEEECSCCTTCEEEEE
T ss_pred CCcccEEEeCC--CCEEEEEEeCCCCCccEEEEEEEECCCCCcce----EEEeC------CCCCEEEeCCCCCCCEEEEE
Confidence 46666665433 47999999765422 22357776554321110 00111 11235789999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|.+
T Consensus 174 V~A 176 (195)
T 2qbw_A 174 VYA 176 (195)
T ss_dssp EEE
T ss_pred EEE
Confidence 853
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.27 E-value=0.71 Score=42.59 Aligned_cols=99 Identities=13% Similarity=0.118 Sum_probs=55.0
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
..|..+.+.... .+++.|.|...... ..-.|+|....+...... ... ....-...+.|+||+|++.|.+
T Consensus 106 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~~---~~~~~~~~~~i~~L~p~t~Y~~ 175 (283)
T 1tdq_A 106 DAPKNLRVGSRT--ATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEV-----LVP---KGIGPTTKTTLTDLVPGTEYGV 175 (283)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTCCCCEEE-----EEE---CCSSSEEEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecC--CCeEEEEecCCCCCccEEEEEEEeCCCCcceEE-----ECC---CCCcccceEEEecCCCCCEEEE
Confidence 457777665433 47999999987432 234677766544322111 100 0001145678899999999999
Q ss_pred EeCCC---CCc--eeEEEECCCCCCCCCCeEEEEEec
Q 011679 136 KIGSG---DSS--REFWFQTPPKIDPDASYKFGIIGD 167 (479)
Q Consensus 136 rv~~~---~~s--~~~~f~T~p~~~~~~~~~f~~~gD 167 (479)
+|..- +.| ....+.|.|.+ -..+++...++
T Consensus 176 ~V~A~n~~g~s~~~~~~~~t~~~~--P~~l~~~~~~~ 210 (283)
T 1tdq_A 176 GISAVMNSKQSIPATMNARTELDS--PRDLMVTASSE 210 (283)
T ss_dssp EEEEEETTEECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EEEEEeCCCCCcceEEEecCCCCC--CCccEEeEecC
Confidence 99542 222 34455665542 23455544443
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=93.27 E-value=0.46 Score=41.79 Aligned_cols=81 Identities=10% Similarity=0.232 Sum_probs=45.3
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
..|..+.+.. ...+++.|+|.-....+ .-.|+|....+...... .. ..-...+.|+||+|+|.
T Consensus 111 ~~P~~~~~~~--~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~ 177 (209)
T 2vkw_A 111 SAPKLEGQMG--EDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI-----RL------PSGSDHVMLKSLDWNAE 177 (209)
T ss_dssp CCCEEEEEEC--TTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCE-----EE------CTTCCEEEECSCCTTCE
T ss_pred CCCccccccc--ccCCeEEEEEECcccCCCCCceEEEEEECCCCCCceee-----ec------CCCccEEEecCCCCCCE
Confidence 3465554443 24589999999863322 23577766222111110 10 01123467899999999
Q ss_pred EEEEeCC------CCCceeEEEEC
Q 011679 133 YYYKIGS------GDSSREFWFQT 150 (479)
Q Consensus 133 Y~Yrv~~------~~~s~~~~f~T 150 (479)
|.+||.. +..|....+++
T Consensus 178 Y~~~V~A~n~~G~s~~S~~~~~~~ 201 (209)
T 2vkw_A 178 YEVYVVAENQQGKSKAAHFVFRTA 201 (209)
T ss_dssp EEEEEEEEETTEECCCEEEEEECC
T ss_pred EEEEEEEEeCCccCCcchhhhhhh
Confidence 9999954 23455555444
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=93.24 E-value=0.58 Score=42.32 Aligned_cols=85 Identities=20% Similarity=0.253 Sum_probs=53.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC------CCEEEEeecCC-CCceEEEeEEEEEeeecceeceEEEEEeCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG------PSTVSYGTSAD-KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~ 130 (479)
+|..+.+..... ..++.|+|.....+. .-.|+|....+ ..+.... .......+.+.+|+|+
T Consensus 115 PP~nLtv~~~~~-~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~-----------~~~t~~~i~l~~L~Pg 182 (223)
T 3up1_A 115 APFDLSVVYREG-ANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVN-----------LSSTKLTLLQRKLQPA 182 (223)
T ss_dssp CCEEEEEEEETT-TTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEE-----------ESSSEEEEEGGGSCTT
T ss_pred CCcceEEEEEcC-CCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEE-----------ecCceeEEeccccCCC
Confidence 478787776543 457899999874221 13567766532 2222111 1112345667899999
Q ss_pred CEEEEEeCC-------C---CCceeEEEECCCCC
Q 011679 131 TKYYYKIGS-------G---DSSREFWFQTPPKI 154 (479)
Q Consensus 131 t~Y~Yrv~~-------~---~~s~~~~f~T~p~~ 154 (479)
|.|..||++ + .||....|+|++.+
T Consensus 183 t~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 183 AMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp CEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred cEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 999999842 1 46888999997653
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.07 E-value=0.84 Score=42.08 Aligned_cols=96 Identities=16% Similarity=0.216 Sum_probs=55.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCC-CCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPH-EPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+..-. .+++.|.|.-.. ....-.|+|......... ..... ......+.|++|+|++.|.++
T Consensus 17 ~P~~l~~~~~~--~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~----~~~~~------~~~~~~~~i~~L~p~t~Y~~~ 84 (283)
T 1tdq_A 17 GPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGEGGK----TTFRL------QPPLSQYSVQALRPGSRYEVS 84 (283)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSSCCC----EEEEE------CTTCSEEEECSCCTTCEEEEE
T ss_pred CCcEEEEEecC--CCeEEEEEECCCCceeEEEEEEEEecCCCCc----EEEEe------CCCCCEEEecCCCCCCEEEEE
Confidence 47777766543 479999999875 222346777654322111 01111 112335678999999999999
Q ss_pred eCCC-----CCceeEEEECCCCCCCCCCeEEEEEec
Q 011679 137 IGSG-----DSSREFWFQTPPKIDPDASYKFGIIGD 167 (479)
Q Consensus 137 v~~~-----~~s~~~~f~T~p~~~~~~~~~f~~~gD 167 (479)
|..- ..+....|.|+|.+ -..+++..+++
T Consensus 85 V~a~~~~g~s~~~~~~~~t~p~~--P~~l~~~~~~~ 118 (283)
T 1tdq_A 85 ISAVRGTNESDASSTQFTTEIDA--PKNLRVGSRTA 118 (283)
T ss_dssp EEEEETTEECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EEEECCCCCCCCeeEEEECCCCC--CCceEEEecCC
Confidence 9542 12345567776643 23455544444
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=92.77 E-value=0.61 Score=43.33 Aligned_cols=97 Identities=15% Similarity=0.153 Sum_probs=55.2
Q ss_pred CCCCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 56 HNSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 56 ~~~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
...|..+.+.... .+++.|.|...... ..-.|+|....+...... .. ..-...+.|+||+|++.|.
T Consensus 113 ~~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~ 179 (290)
T 3r8q_A 113 VSPPRRARVTDAT--ETTITISWRTKTETITGFQVDAVPANGQTPIQR-----TI------KPDVRSYTITGLQPGTDYK 179 (290)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSCCCCEEEEEEEESSSCCCEEE-----EE------CTTCSEEEECSCCTTCEEE
T ss_pred CCCCceeEEEEcC--CCeEEEEEeCCCCcccEEEEEEEECCCCcceEE-----ec------CCCccEEEECCCCCCCEEE
Confidence 3467777776433 57999999986432 234667765543321111 10 0112246789999999999
Q ss_pred EEeCCC---C--CceeEEEECCCCCCCCCCeEEEEEec
Q 011679 135 YKIGSG---D--SSREFWFQTPPKIDPDASYKFGIIGD 167 (479)
Q Consensus 135 Yrv~~~---~--~s~~~~f~T~p~~~~~~~~~f~~~gD 167 (479)
++|..- + ......+.|.|.+ ...+++...++
T Consensus 180 ~~V~A~n~~g~s~~~~~~~~t~p~~--P~~l~~~~~~~ 215 (290)
T 3r8q_A 180 IYLYTLNDNARSSPVVIDASTAIDA--PSNLRFLATTP 215 (290)
T ss_dssp EEEEEEETTEECCCEEEEEECCCCC--CEEEEEEEEET
T ss_pred EEEEEEeCCcccCCEEEEecCCCCC--CCccEEEeeCC
Confidence 999542 1 2234556676543 23455544443
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.69 E-value=0.83 Score=39.20 Aligned_cols=91 Identities=13% Similarity=0.206 Sum_probs=51.9
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
.+|..+.+..- ..+++.|+|.-.... ..-.|+|....+. .. ..... .-...+.|+||+|++.|.+
T Consensus 8 ~~P~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~-~~-----~~~~~------~~~~~~~i~~L~p~t~Y~~ 73 (186)
T 1qr4_A 8 DNPKDLEVSDP--TETTLSLRWRRPVAKFDRYRLTYVSPSGK-KN-----EMEIP------VDSTSFILRGLDAGTEYTI 73 (186)
T ss_dssp CCCEEEEEESC--CSSEEEEEEECCSSCCSEEEEEEECTTCC-EE-----EEEEC------TTCSEEEEESCCSSCEEEE
T ss_pred cCCCceEEEec--CCCEEEEEEeCCCCCccEEEEEEEeCCCC-ee-----EEECC------CCCCEEEECCCCCCCEEEE
Confidence 35777766643 357999999976432 2345777643221 10 01110 1122457899999999999
Q ss_pred EeCC---CCCc--eeEEEECCCCCCCCCCeEEE
Q 011679 136 KIGS---GDSS--REFWFQTPPKIDPDASYKFG 163 (479)
Q Consensus 136 rv~~---~~~s--~~~~f~T~p~~~~~~~~~f~ 163 (479)
+|.. +..| ....++|.|.+ -..+++.
T Consensus 74 ~V~a~~~~~~s~~~~~~~~t~p~~--P~~l~~~ 104 (186)
T 1qr4_A 74 SLVAEKGRHKSKPTTIKGSTVVGS--PKGISFS 104 (186)
T ss_dssp EEEEESSSCBCCCEEEEEECCCCC--CSCEEEE
T ss_pred EEEEEcCCccCCCEEEEEECCCCC--CCccEEE
Confidence 9954 2222 45677777643 2345443
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.65 E-value=0.35 Score=38.47 Aligned_cols=67 Identities=19% Similarity=0.424 Sum_probs=40.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+++... . +++.|+|.-...+. .-.|+|...... .... .. ..-...+.|+||+|+|.|
T Consensus 20 ~P~~l~~~~~--~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~-~~~~-----~~------~~~~~~~~l~~L~p~t~Y 84 (116)
T 2edb_A 20 QPSSLHVRPQ--T-NCIIMSWTPPLNPNIVVRGYIIGYGVGSPY-AETV-----RV------DSKQRYYSIERLESSSHY 84 (116)
T ss_dssp CCSCEEEEEC--S-SCEEEEECCCSCTTBCCCEEEEEEEESSTT-SEEE-----EE------ETTCCEEEECSCCSSSBE
T ss_pred CCCCeEEEEC--C-CEEEEEEcCCCCCCCceeEEEEEEEeCCCC-eEEE-----Ee------CCCeeEEEeCCCCCCCEE
Confidence 5777777653 3 79999998764332 235677642211 1110 10 011235678999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
.+||..
T Consensus 85 ~~~V~A 90 (116)
T 2edb_A 85 VISLKA 90 (116)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999954
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=92.53 E-value=0.31 Score=47.31 Aligned_cols=74 Identities=19% Similarity=0.346 Sum_probs=42.3
Q ss_pred CCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC------
Q 011679 70 DGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------ 139 (479)
Q Consensus 70 ~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~------ 139 (479)
..+++.|+|.-..+.+. -.|+|........... ... ..-...+.|++|+|++.|.+||.+
T Consensus 305 ~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~ 374 (389)
T 2jll_A 305 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE----KKV------QGNKDHIILEHLQWTMGYEVQITAANRLGY 374 (389)
T ss_dssp TTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBC----CEE------CTTCCEEEECSCCTTCEEEEEEEEEC-CCB
T ss_pred cCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeE----eec------cCCcceEEeCCcCCCCEEEEEEEEEcCCcC
Confidence 35799999986543322 3566655322111100 000 112234678999999999999953
Q ss_pred CCCceeEEEECCCCC
Q 011679 140 GDSSREFWFQTPPKI 154 (479)
Q Consensus 140 ~~~s~~~~f~T~p~~ 154 (479)
+..|.. .|+|.|.|
T Consensus 375 s~~s~~-~~~T~~~P 388 (389)
T 2jll_A 375 SEPTVY-EFSMPPKP 388 (389)
T ss_dssp CCCEEE-EEECCCCC
T ss_pred CCceee-EecCCCCC
Confidence 234544 89998765
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=92.53 E-value=0.54 Score=42.14 Aligned_cols=87 Identities=15% Similarity=0.165 Sum_probs=52.9
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCCC------CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCC
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~ 130 (479)
..|..+++...+ .+...|+|....... .-.|+|....+. ...+ ..... ..-...+.|.+|+||
T Consensus 107 ~pP~~l~~~~~~--~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~--~~~~~------~~~~~~~~l~~L~p~ 175 (214)
T 2b5i_B 107 MAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEA--PLLTL------KQKQEWICLETLTPD 175 (214)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTS--CCEEE------CSCCCEEEECSCCTT
T ss_pred CCCceEEEEEec--CCeEEEEECCCCccccCCCceEEEEEEecCCCC-hhee--eeeee------cccceEEEeccCCCC
Confidence 347778877654 368999999874321 235666654331 1111 00010 112346778999999
Q ss_pred CEEEEEeCC----------CCCceeEEEECCCCC
Q 011679 131 TKYYYKIGS----------GDSSREFWFQTPPKI 154 (479)
Q Consensus 131 t~Y~Yrv~~----------~~~s~~~~f~T~p~~ 154 (479)
|.|..||++ +.||+...|+|.|..
T Consensus 176 t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 176 TQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred CEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 999999852 257889999998753
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=92.17 E-value=0.35 Score=44.97 Aligned_cols=78 Identities=19% Similarity=0.239 Sum_probs=46.0
Q ss_pred eEEEEeecCCCCcEEEEEEcC--CC----CCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 61 QVHITQGDYDGKAVIISWVTP--HE----PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 61 ~v~l~~~~~~~~~~~v~W~t~--~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
.+.+... ..+++.|+|.-. +. ...-.|+|....+... . .... .-.....|+||+|++.|.
T Consensus 202 ~~~~~~~--~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~~-~-----~~~~------~~~~~~~~~~L~p~t~Y~ 267 (290)
T 3l5i_A 202 TVRTKKV--GKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNET-A-----VNVD------SSHTEYTLSSLTSDTLYM 267 (290)
T ss_dssp CEEEEEE--CSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCCE-E-----EEEE------TTCSEEEECSCCTTCEEE
T ss_pred eeeEeec--cCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCeE-E-----EEeC------CCceEEEeCCCCCCCEEE
Confidence 4544332 357899999732 11 1223577766543211 1 1111 112356789999999999
Q ss_pred EEeCCC-----CCceeEEEECCC
Q 011679 135 YKIGSG-----DSSREFWFQTPP 152 (479)
Q Consensus 135 Yrv~~~-----~~s~~~~f~T~p 152 (479)
+||..- ..|....|+|+|
T Consensus 268 ~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 268 VRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEEEEETTEEEECCCEEEECCC
T ss_pred EEEEEEeCCCCCCCCceEeecCC
Confidence 999532 357788898864
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.12 E-value=0.76 Score=43.40 Aligned_cols=86 Identities=15% Similarity=0.066 Sum_probs=50.5
Q ss_pred CCceEEEEeecC----CCCcEEEEEEcCCCCC----CCEEEEe-ecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCC
Q 011679 58 SPQQVHITQGDY----DGKAVIISWVTPHEPG----PSTVSYG-TSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (479)
Q Consensus 58 ~P~~v~l~~~~~----~~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~ 128 (479)
+|..+.+..... ..+++.|+|......+ .-.|+|. ...+..+..+. . .......+.|++|+
T Consensus 205 pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~----~------~~~~~~~~~l~~L~ 274 (313)
T 2d9q_B 205 PPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVG----P------LPLEALQYELCGLL 274 (313)
T ss_dssp CCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEE----E------ECSCEEEEEECSCC
T ss_pred cCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcc----c------ccCcceEEEEeCCC
Confidence 466555443211 2478999999764222 2357777 34333332221 0 01124567899999
Q ss_pred CCCEEEEEeCC------C---CCceeEEEECCCC
Q 011679 129 YDTKYYYKIGS------G---DSSREFWFQTPPK 153 (479)
Q Consensus 129 p~t~Y~Yrv~~------~---~~s~~~~f~T~p~ 153 (479)
|+|.|..||.+ | .||+...++|+..
T Consensus 275 p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 275 PATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp SCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred CCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 99999999852 3 3678888888653
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.10 E-value=0.69 Score=39.79 Aligned_cols=70 Identities=17% Similarity=0.303 Sum_probs=43.1
Q ss_pred CCCCceEEEEeecCCCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCC
Q 011679 56 HNSPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (479)
Q Consensus 56 ~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~ 130 (479)
+..|..+.+.... .+++.|.|....... .-.|+|............. . -...+.+++|+|+
T Consensus 103 p~~p~~~~~~~~~--~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~--~~~~~~~~~L~p~ 168 (197)
T 3lpw_A 103 PLPPGKITLMDVT--RNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT----------V--KVTEATITGLIQG 168 (197)
T ss_dssp CCCCSCEEEEEEC--SSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEE----------E--SSSEEEECCCCTT
T ss_pred CCCCcccEEEecc--CCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeec----------c--cccEEEeCCcCCC
Confidence 3457777766443 479999998764322 2356776654433222110 0 1123578999999
Q ss_pred CEEEEEeCC
Q 011679 131 TKYYYKIGS 139 (479)
Q Consensus 131 t~Y~Yrv~~ 139 (479)
+.|.|||..
T Consensus 169 t~Y~~~V~A 177 (197)
T 3lpw_A 169 EEYSFRVSA 177 (197)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.00 E-value=0.15 Score=40.68 Aligned_cols=70 Identities=14% Similarity=0.183 Sum_probs=40.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+++..- ..+++.|+|.-...... -.|+|.......... .... ..-...+.|++|+|+|.|
T Consensus 20 ~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y 87 (119)
T 1wfn_A 20 PVGHLSFSEI--LDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRV----THYL------PNVTLEYRVTGLTALTTY 87 (119)
T ss_dssp CCSCCEEESC--CSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCC----CEEE------CSSCCEEEEESCCTTCEE
T ss_pred CCCceEEEEC--CCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceE----EEEe------CCCceEEEEcCCCCCCEE
Confidence 3556655542 35799999987643322 345665443221100 0010 112335678999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
.+||.+
T Consensus 88 ~~~V~A 93 (119)
T 1wfn_A 88 TIEVAA 93 (119)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999954
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.96 E-value=0.85 Score=36.75 Aligned_cols=67 Identities=13% Similarity=0.327 Sum_probs=40.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+++... . +++.|+|.-...... -.|+|.... .... .... ..-.....|++|+|+|.|
T Consensus 30 ~P~~l~~~~~--~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~-~~~~-----~~~~------~~~~~~~~i~~L~p~t~Y 94 (126)
T 1x5i_A 30 VPSSLHVRPL--V-TSIVVSWTPPENQNIVVRGYAIGYGIGS-PHAQ-----TIKV------DYKQRYYTIENLDPSSHY 94 (126)
T ss_dssp SCSEEEEEEE--T-TEEEEEEECCSCTTBCCCEEEEEECSSC-GGGE-----EEEC------CTTCCEEEECSCCSSCEE
T ss_pred CCCeeEEEec--C-CEEEEEEcCCCCCCCCEeEEEEEEEcCC-CCce-----EEEe------CCCeeEEEEeCCCCCCEE
Confidence 5777877664 2 799999998753322 246665311 1110 1111 112335678999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
.+||..
T Consensus 95 ~~~V~A 100 (126)
T 1x5i_A 95 VITLKA 100 (126)
T ss_dssp CCEEEE
T ss_pred EEEEEE
Confidence 999853
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=91.93 E-value=0.41 Score=46.17 Aligned_cols=72 Identities=14% Similarity=0.230 Sum_probs=42.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--CCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
+|..+.+.... ..+++.|.|..... ...-.|+|....+........ .. ..-...+.|++|+|++.|.|
T Consensus 4 ~P~~l~~~~~~-~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~------~~~~~~~~i~~L~p~t~Y~~ 73 (368)
T 1fnf_A 4 PPTNLHLEANP-DTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---VV------HADQSSCTFDNLSPGLEYNV 73 (368)
T ss_dssp CCEEEEEEECS-SSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEE---EE------CTTCCEEECCCCCTTSCEEE
T ss_pred CCcceEEEecC-CCcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEE---Ee------cCCcCEEEECCCCCCCEEEE
Confidence 47777776533 22469999998642 223467777655422111110 00 11223567899999999999
Q ss_pred EeCC
Q 011679 136 KIGS 139 (479)
Q Consensus 136 rv~~ 139 (479)
||..
T Consensus 74 ~V~a 77 (368)
T 1fnf_A 74 SVYT 77 (368)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=91.89 E-value=0.81 Score=40.15 Aligned_cols=70 Identities=17% Similarity=0.243 Sum_probs=42.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--CCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
.|..+.+.... .+++.|+|.-... ...-.|+|....+..... .... ..-...+.|+||+|+|.|.+
T Consensus 116 ~P~~l~~~~~~--~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y~~ 183 (203)
T 2gee_A 116 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVA----ELSI------SPSDNAVVLTNLLPGTEYVV 183 (203)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCCSEEEEEEEETTCGGGCE----EEEE------CTTCCEEEECSCCTTCEEEE
T ss_pred CCCceEEEEcC--CCEEEEEEcCCCCCCccEEEEEEEECCCCCccE----EEEc------CCCcCEEEECCCCCCCEEEE
Confidence 57777765433 4799999998742 123467777644321111 0110 11233567899999999999
Q ss_pred EeCC
Q 011679 136 KIGS 139 (479)
Q Consensus 136 rv~~ 139 (479)
+|..
T Consensus 184 ~V~A 187 (203)
T 2gee_A 184 SVSS 187 (203)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=91.88 E-value=0.59 Score=45.23 Aligned_cols=71 Identities=13% Similarity=0.222 Sum_probs=43.1
Q ss_pred CCceEEEEeecCCCC-cEEEEEEcCCC--CCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 58 SPQQVHITQGDYDGK-AVIISWVTPHE--PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~-~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
+|..+.+.... .+ ++.|+|.-... ...-.|+|....+........ .. ..-...+.|+||+|++.|.
T Consensus 5 ~P~~l~~~~~~--~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~---~~------~~~~~~~~i~~L~p~t~Y~ 73 (375)
T 3t1w_A 5 PPTNLHLEANP--DTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---VV------HADQSSCTFDNLSPGLEYN 73 (375)
T ss_dssp CCEEEEEEEET--TTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEE---EE------ETTCCEEEECCCCTTCCEE
T ss_pred CCCccEEEecC--CCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeE---Ec------CCCccEEEEcCCcCCCEEE
Confidence 47777776543 46 89999997642 223467777655422111110 10 0112356789999999999
Q ss_pred EEeCC
Q 011679 135 YKIGS 139 (479)
Q Consensus 135 Yrv~~ 139 (479)
+||..
T Consensus 74 ~~V~a 78 (375)
T 3t1w_A 74 VSVYT 78 (375)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99954
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=91.74 E-value=1.2 Score=39.74 Aligned_cols=79 Identities=19% Similarity=0.310 Sum_probs=46.0
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEe
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKI 137 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv 137 (479)
+|..++.+-- ..+++.++|..+... ...-.|..-.+. ...++.. .... ...++||+|+|.|-|||
T Consensus 153 Pp~NL~At~V--T~tSVtLsW~aP~~~-~GI~gY~ly~~g---~~v~~v~-------~~~t--syt~~gLk~~TeYsF~V 217 (238)
T 2w1n_A 153 PVRDFKASEI--NKKNVTVTWTEPETT-EGLEGYILYKDG---KKVAEIG-------KDET--SYTFKKLNRHTIYNFKI 217 (238)
T ss_dssp CCEEEEEEEE--CSSCEEEEEECCSCC-TTEEEEEEEETT---EEEEEEE-------TTCC--EEEECSCCTTCEEEEEE
T ss_pred CCCceEEEEc--cCCeEEEEecCCCCC-CCceeEEEEeCC---ceeEEee-------ccce--EEEecCCCCCCEEEEEE
Confidence 4666766653 468999999988543 335555543332 1111110 1111 24679999999999999
Q ss_pred CC----C--CCceeEEEECC
Q 011679 138 GS----G--DSSREFWFQTP 151 (479)
Q Consensus 138 ~~----~--~~s~~~~f~T~ 151 (479)
.. | ...+...+||.
T Consensus 218 ~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 218 AAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEEETTSCBCCCEEEEEECC
T ss_pred EEEeCCCCccccCcEEEEec
Confidence 53 2 22355566663
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=91.62 E-value=0.23 Score=44.82 Aligned_cols=90 Identities=20% Similarity=0.332 Sum_probs=50.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+... ..+++.|.|.-..... .-.|+|....+..... +....... .......+.|+||+|++.|
T Consensus 101 ~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~~L~p~t~Y 173 (234)
T 3f7q_A 101 EPGRLAFNVV--SSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVLV---DNPKNRMLLIENLRESQPY 173 (234)
T ss_dssp CCCCCEEEEC--SSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECCC---SCTTCCEEEEECCCTTCCE
T ss_pred CCCccEEEEe--cCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEEe---cCCcceEEEeCCCCCCCeE
Confidence 4666666643 3478999998764322 2256676544332110 00011000 1112235678999999999
Q ss_pred EEEeCC------CCCce-eEEEECCCCC
Q 011679 134 YYKIGS------GDSSR-EFWFQTPPKI 154 (479)
Q Consensus 134 ~Yrv~~------~~~s~-~~~f~T~p~~ 154 (479)
.+||.. +..|. ...++|.+.+
T Consensus 174 ~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 174 RYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp EEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred EEEEEEECCCccCCCcCceeEeecCCCC
Confidence 999953 23454 4677776543
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=91.40 E-value=1.3 Score=41.98 Aligned_cols=82 Identities=16% Similarity=0.204 Sum_probs=49.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC--C----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP--G----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~--~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+.......+++.|+|...... . .-.|+|.......+..+.- ......+.|.+|+|++
T Consensus 199 pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~-----------~~~~~~~~l~~L~p~t 267 (325)
T 1n26_A 199 PPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-----------KDLQHHCVIHDAWSGL 267 (325)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-----------GGGCSEEEESSCCTTC
T ss_pred CCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc-----------cCCceEEEEeCCCCCC
Confidence 577777765433346999999987431 1 1256776654333322110 0112356789999999
Q ss_pred EEEEEeCC------C---CCceeEEEEC
Q 011679 132 KYYYKIGS------G---DSSREFWFQT 150 (479)
Q Consensus 132 ~Y~Yrv~~------~---~~s~~~~f~T 150 (479)
.|..||.+ + .||+...++|
T Consensus 268 ~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 268 RHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp CEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred eEEEEEEEecCCCCCCCcCCCCccceec
Confidence 99999953 2 3566655554
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=91.36 E-value=0.86 Score=39.84 Aligned_cols=83 Identities=16% Similarity=0.155 Sum_probs=47.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCC--CCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPH--EPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~--~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+... ..+++.|+|.-.. ... .-.|+|............ .. .......+.|+||+|++
T Consensus 107 ~P~~~~~~~~--~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~----~~-----~~~~~~~~~i~~L~p~t 175 (205)
T 1cfb_A 107 NPDNVVGQGT--EPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN----NI-----FDWRQNNIVIADQPTFV 175 (205)
T ss_dssp CCSCCEEECS--STTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEE----EE-----CCTTCCEEEECSCCSSC
T ss_pred CCeeeEeecC--CCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEE----Ee-----cCCCccEEEEcCCCCCc
Confidence 4666665543 3579999998754 111 235677665543211110 00 01112356789999999
Q ss_pred EEEEEeCC------CC-CceeEEEECC
Q 011679 132 KYYYKIGS------GD-SSREFWFQTP 151 (479)
Q Consensus 132 ~Y~Yrv~~------~~-~s~~~~f~T~ 151 (479)
.|.+||.. +. .|....++|.
T Consensus 176 ~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 176 KYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp EEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred EEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 99999953 23 3556666664
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.32 E-value=0.52 Score=41.18 Aligned_cols=71 Identities=17% Similarity=0.250 Sum_probs=40.4
Q ss_pred CceEEEEeecCCCCcEEEEEEcCC--CCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPH--EPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
|..+.+..-....+++.|.|.-.. ....-.|+|.......... ..... .-...+.|+||+|++.|.+|
T Consensus 3 P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~~------~~~~~~~i~~L~p~t~Y~~~ 72 (201)
T 2ha1_A 3 PVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWK----EATIP------GHLNSYTIKGLKPGVVYEGQ 72 (201)
T ss_dssp CCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCE----EEEEC------TTCCEEEECSCCTTEEEEEE
T ss_pred ceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceE----EEecC------CCccEEEecCCCCCCEEEEE
Confidence 555554431112579999999863 1223467777544321111 01111 11235778999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|..
T Consensus 73 V~a 75 (201)
T 2ha1_A 73 LIS 75 (201)
T ss_dssp EEE
T ss_pred EEE
Confidence 954
|
| >2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A* | Back alignment and structure |
|---|
Probab=91.13 E-value=0.14 Score=53.70 Aligned_cols=93 Identities=22% Similarity=0.429 Sum_probs=49.7
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEeEEEE-E-------ee-----ecceec-----e
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNN-Y-------TF-----YKYKSG-----Y 118 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~-~-------~~-----~~~~~~-----~ 118 (479)
.+|..+.+.......++++|.|..++. ......|..-.+. +..++... . ++ .+...+ .
T Consensus 36 ~~p~~~~~~t~~~~~~si~l~~~~p~~-~~~~~~y~vy~ng---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (608)
T 2uvf_A 36 DAPQQLQVPTLAYDESSIVLVWKAPED-TRKIVDYQIFSAG---KLLGKASDNNDNFSPAKPYIDHFYVNDKDNFQHKIV 111 (608)
T ss_dssp CCCEEEECCTTCBCSSCEEEEEECCSC-CTTEEEEEEEETT---EEEEEHHHHHHHHCSSHHHHHHHHHTCGGGCSCCCC
T ss_pred CCCCceEeeecccCCcEEEEEEeCCcc-ccccccEEEEECC---EEeEeeccccccccccccccccccccccccccceee
Confidence 357766553222346899999998854 3455555542221 11111100 0 00 000000 1
Q ss_pred EEEEEeCCCCCCCEEEEEeCC----C---CCceeEEEECCCC
Q 011679 119 IHQCLVDGLEYDTKYYYKIGS----G---DSSREFWFQTPPK 153 (479)
Q Consensus 119 ~~~v~l~gL~p~t~Y~Yrv~~----~---~~s~~~~f~T~p~ 153 (479)
.++..+++|+|+|+|.|++.. + ..++.-..+|.+.
T Consensus 112 ~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 112 MQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred eeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 357788999999999999964 3 2345556666553
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=90.68 E-value=1.2 Score=39.01 Aligned_cols=69 Identities=17% Similarity=0.339 Sum_probs=36.3
Q ss_pred CCcEEEEEEcCCCCCCC----EEEEeecCCCCceEEEeEEEEEeee--cceeceEEEEEeCCCCCCCEEEEEeCC
Q 011679 71 GKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFY--KYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~l~gL~p~t~Y~Yrv~~ 139 (479)
.+++.|+|.-....+.. .|+|.................+... +....-...+.|++|+|+|.|.|||..
T Consensus 15 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 89 (214)
T 2ibg_A 15 DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 89 (214)
T ss_dssp TTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEEEEEEEE
T ss_pred CCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEEEEEEEE
Confidence 47999999876543332 4566554321111111110000000 000123446678999999999999854
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.17 E-value=1.6 Score=46.32 Aligned_cols=92 Identities=15% Similarity=0.308 Sum_probs=48.8
Q ss_pred CCCCceEEEEeecCCCC---cEEEEEEcCCCCCC----CEEEEeecCC--CCceEEEeEEEEEeeecceeceEEEEEeCC
Q 011679 56 HNSPQQVHITQGDYDGK---AVIISWVTPHEPGP----STVSYGTSAD--KFDFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (479)
Q Consensus 56 ~~~P~~v~l~~~~~~~~---~~~v~W~t~~~~~~----~~v~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~l~g 126 (479)
+..|..+.+.......+ ++.|.|.-...... -.|+|....+ .......-.... ..+-...+.|+|
T Consensus 267 p~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~------v~~~~~~~~l~~ 340 (680)
T 1zlg_A 267 PPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKT------TDGFQNSVILEK 340 (680)
T ss_pred CCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEE------EcCCeeEEEeCC
Confidence 34577777654311245 99999996543222 2456652211 000000000001 112235678999
Q ss_pred CCCCCEEEEEeCC------CCCcee---EEEECCCC
Q 011679 127 LEYDTKYYYKIGS------GDSSRE---FWFQTPPK 153 (479)
Q Consensus 127 L~p~t~Y~Yrv~~------~~~s~~---~~f~T~p~ 153 (479)
|+|+|.|.+||.+ +..|.. ..++|.+.
T Consensus 341 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 341 LQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 9999999999953 223433 67777654
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=90.12 E-value=2.2 Score=38.23 Aligned_cols=83 Identities=17% Similarity=0.301 Sum_probs=50.0
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+++.... ..+++.|+|....... .-.|+|....+....... .. . . -...+.|.+|+||+.
T Consensus 124 pP~~l~~~~~~-~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~---~~-~----~--~~~~~~l~~L~p~t~ 192 (227)
T 1eer_B 124 APVGLVARLAD-ESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV---EI-L----E--GRTECVLSNLRGRTR 192 (227)
T ss_dssp CCEEEEEEECS-STTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE---EE-C----T--TCCEEEECCCCSSCE
T ss_pred cCcceEEEEcC-CCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE---EE-e----c--CceEEEEcccCCCCe
Confidence 57777776532 2478999998864321 125666654432221100 00 0 0 123567899999999
Q ss_pred EEEEeCC-----------CCCceeEEEECC
Q 011679 133 YYYKIGS-----------GDSSREFWFQTP 151 (479)
Q Consensus 133 Y~Yrv~~-----------~~~s~~~~f~T~ 151 (479)
|..||.+ +.||....|+|+
T Consensus 193 Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 193 YTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp EEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred EEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 9999842 257788888883
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=89.97 E-value=0.35 Score=37.33 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=36.4
Q ss_pred CCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC
Q 011679 70 DGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (479)
Q Consensus 70 ~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~ 139 (479)
..+++.|+|...... ..-.|+|....+..... .... .+-.-.+.|+||.|+|.|.-++..
T Consensus 18 t~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~----~~~v------~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 18 TASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ----YLDL------PSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp GGGCEEEECCCSCTTEEEEEEEEEETTTCCCCE----EEEE------ETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCCeEEEEECCCCCCccEEEEEEEeCCCCCcce----EEEC------CCCccEEEECCCCCCCEEEEEEEE
Confidence 457899999876432 23467887765432110 0010 112335789999999999888743
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.85 E-value=0.91 Score=36.11 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=46.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcC--CCCCCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTP--HEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~--~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+.. ..+++.|+|.-. ...... .|.|............ ... ..+.+. |+|++
T Consensus 21 ~P~~v~~~~---~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~-----------~~~--~~~~~~-L~~~t 83 (117)
T 1wj3_A 21 PPGNVVWNA---TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN-----------TNK--TSAELV-LPIKE 83 (117)
T ss_dssp CCCSCBCCE---ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE-----------ESS--SEEEEE-CCCSS
T ss_pred CCccEEEEE---eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEEe-----------CCC--cEEEEE-CCCCC
Confidence 355555443 246899999876 222222 4556554432221110 111 245566 99999
Q ss_pred EEEEEeC------CCCCceeEEEECCCC
Q 011679 132 KYYYKIG------SGDSSREFWFQTPPK 153 (479)
Q Consensus 132 ~Y~Yrv~------~~~~s~~~~f~T~p~ 153 (479)
.|.+||. .+..|+...|+|...
T Consensus 84 ~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 84 DYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp CEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 9999984 345677888988653
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.55 E-value=0.14 Score=39.98 Aligned_cols=70 Identities=14% Similarity=0.210 Sum_probs=41.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
.|..+++..-. .+++.|+|.-.... ..-.|+|.......... .... ..-...+.|+||+|+|.|.++
T Consensus 10 ~P~~l~v~~~t--~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~----~~~v------~~~~~~~~l~~L~p~t~Y~~~ 77 (105)
T 2ekj_A 10 PPSNLALASET--PDSLQVSWTPPLGRVLHYWLTYAPASGLGPEK----SVSV------PGARSHVTLPDLQAATKYRVL 77 (105)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCSBBCBBCCCTTSCSCCC----CBCC------BTTSSEEEECSCCSSCCCBCB
T ss_pred CCCceEEEeCC--CCEEEEEEeCCCCcceEEEEEEEECCCCCccE----EEEe------CCCcCEEEeCCCCCCCEEEEE
Confidence 47777776543 47999999887422 12356665443321100 0000 011235678999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|..
T Consensus 78 V~A 80 (105)
T 2ekj_A 78 VSA 80 (105)
T ss_dssp BCB
T ss_pred EEE
Confidence 864
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=89.43 E-value=0.58 Score=42.56 Aligned_cols=82 Identities=16% Similarity=0.240 Sum_probs=47.4
Q ss_pred CCceEEEEeecCCC----CcEEEEEEcCCCCC--------CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeC
Q 011679 58 SPQQVHITQGDYDG----KAVIISWVTPHEPG--------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVD 125 (479)
Q Consensus 58 ~P~~v~l~~~~~~~----~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 125 (479)
.|..+.+....... .++.|+|....... .-.|+|....+....... ......+.|.
T Consensus 133 pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------~~~~~~~~l~ 200 (236)
T 1axi_B 133 PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSVPVY 200 (236)
T ss_dssp CCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEEEEE
T ss_pred CCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe------------ccCCCEEEEe
Confidence 46666544332211 34899999874321 124566655432221111 0012356788
Q ss_pred CCCCCCEEEEEeCC--------CCCceeEEEECC
Q 011679 126 GLEYDTKYYYKIGS--------GDSSREFWFQTP 151 (479)
Q Consensus 126 gL~p~t~Y~Yrv~~--------~~~s~~~~f~T~ 151 (479)
+|+||+.|..||++ +.||+...|+|+
T Consensus 201 ~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 201 SLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp EEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 99999999999953 256778888774
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.01 E-value=1.2 Score=39.80 Aligned_cols=86 Identities=20% Similarity=0.256 Sum_probs=51.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC---------CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP---------GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~---------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~ 128 (479)
+|..+.+.. .....|+|...... -.-.|+|....+.-.....+.... .......+.+.+|.
T Consensus 103 PP~nltv~~----~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~~W~~~~~~~~~~------~~~~~~~~~~~~L~ 172 (219)
T 3tgx_A 103 PPFDVTVTF----SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGDPWAVSPRRKLIS------VDSRSVSLLPLEFR 172 (219)
T ss_dssp CCEEEEEEE----SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTSCTTSCCEEEEEC------SSCSEEEECTTSSC
T ss_pred CCCceEEEe----CCCEEEEEeCCcCCccccccccCEEEEEEEecCCCCceecccceeEe------cCCCEEEEEeccCC
Confidence 477666652 25899999986321 123577776653211110111110 11235567789999
Q ss_pred CCCEEEEEeCC---------C---CCceeEEEECCCC
Q 011679 129 YDTKYYYKIGS---------G---DSSREFWFQTPPK 153 (479)
Q Consensus 129 p~t~Y~Yrv~~---------~---~~s~~~~f~T~p~ 153 (479)
|++.|..||++ | +||+...|+|+++
T Consensus 173 p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 173 KDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp SSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 99999999942 3 4688999999764
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=88.75 E-value=2 Score=41.22 Aligned_cols=71 Identities=15% Similarity=0.334 Sum_probs=42.3
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
..|..+.+.... .+++.|.|.-...+ ..-.|+|....+..... ..... .-.....++||+|++.|.|
T Consensus 277 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~----~~~~~------~~~~~~~~~~L~p~t~Y~~ 344 (368)
T 1fnf_A 277 DVPRDLEVVAAT--PTSLLISWDAPAVTVRYYRITYGETGGNSPVQ----EFTVP------GSKSTATISGLKPGVDYTI 344 (368)
T ss_dssp CSCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEEETTCCSCCE----EEEEE------TTCCEEEECSCCTTCCEEE
T ss_pred CCCCeeEEEecC--CCEEEEEeeCCCCccceEEEEEEECCCCCccE----EEEcC------CCeeEEEecCCCCCCEEEE
Confidence 346666665433 47999999876443 22456776654321110 01111 1123567899999999999
Q ss_pred EeCC
Q 011679 136 KIGS 139 (479)
Q Consensus 136 rv~~ 139 (479)
||..
T Consensus 345 ~V~A 348 (368)
T 1fnf_A 345 TVYA 348 (368)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9853
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=88.49 E-value=1.7 Score=45.15 Aligned_cols=67 Identities=21% Similarity=0.230 Sum_probs=43.6
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCC-CCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHE-PGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~-~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
|....+.-- ..++++++|.-... .+. -.||+....+..+..+. .+ . .. ...|+||.||+.|
T Consensus 13 P~~P~v~~~--~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~---~------~t--~~~V~~L~~g~~Y 78 (573)
T 3uto_A 13 PRFPIIENI--LDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS---R------YT--YTTIEGLRAGKQY 78 (573)
T ss_dssp CEEEEEEEE--CSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE---S------SS--EEEECCCCTTCEE
T ss_pred CCCCEEEEe--eCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc---c------CC--EEEeCCCCCCCcE
Confidence 555555443 34899999998642 222 36777777776665543 21 1 11 2467999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
.+||.+
T Consensus 79 ~FRV~A 84 (573)
T 3uto_A 79 EFRIIA 84 (573)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 999954
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=88.12 E-value=7.8 Score=37.05 Aligned_cols=83 Identities=25% Similarity=0.312 Sum_probs=48.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+.+.... .+++.|.|...... +.. .|+|............ .........|.+|+|++.
T Consensus 198 ~P~~~~~~~~~--~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~~ 264 (389)
T 2jll_A 198 SPYGVKIIELS--QTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-----------SHGVQTMVVLNNLEPNTT 264 (389)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-----------CSTTCSEEEECSCCTTCE
T ss_pred CCcceEEeecc--CCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-----------ccCCcceEEECCccCCCE
Confidence 45555554432 47899999864322 222 4566554433222111 111223567899999999
Q ss_pred EEEEeCC------CCCceeEEEECCCC
Q 011679 133 YYYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 133 Y~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
|.|||.. +..|....++|.+.
T Consensus 265 y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 265 YEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp EEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEcCCccCCCCcceEEEecCC
Confidence 9999943 24566778888664
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=86.51 E-value=6.7 Score=35.91 Aligned_cols=71 Identities=13% Similarity=0.169 Sum_probs=40.6
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEe
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKI 137 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv 137 (479)
|..+.+... .+++.|+|.-.... ..-.|+|........... ..... ...-.....++||+|++.|.+||
T Consensus 105 ~~~~~~~~~---~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~L~p~t~Y~~~V 174 (290)
T 3l5i_A 105 VMDLKAFPK---DNMLWVEWTTPRESVKKYILEWCVLSDKAPCIT--DWQQE-----DGTVHRTYLRGNLAESKCYLITV 174 (290)
T ss_dssp CEEEEEEEE---TTEEEEEEECCSSCCCEEEEEEEEECSSSCCCC--EEEEE-----ETTCSEEECCSCCCTTCEEEEEE
T ss_pred cceeEEEeC---CCeEEEEEeCCCCCCCcEEEEEEECCCCCCCCc--CeEEc-----cCCCcceEEecCcCCccEEEEEE
Confidence 445555543 25999999987542 234677776544321000 00000 11223456679999999999999
Q ss_pred CC
Q 011679 138 GS 139 (479)
Q Consensus 138 ~~ 139 (479)
..
T Consensus 175 ~A 176 (290)
T 3l5i_A 175 TP 176 (290)
T ss_dssp EE
T ss_pred EE
Confidence 53
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=85.59 E-value=4.1 Score=39.07 Aligned_cols=83 Identities=11% Similarity=0.083 Sum_probs=48.3
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCC-CceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
..|..+.+.. ...+++.|+|...... ..-.|+|...... .... .... .-.....|+||+|++.|.
T Consensus 279 ~~P~~l~~~~--~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~-----~~~~------~~~~~~~i~~L~p~t~Y~ 345 (375)
T 3t1w_A 279 DSPTGIDFSD--ITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE-----DRVP------HSRNSITLTNLTPGTEYV 345 (375)
T ss_dssp CCCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEE-----EEEE------TTCCEEEECSCCTTCEEE
T ss_pred CCCCccEeee--ccCCEEEEEECCCCcceeeEEEEEEECCCCCccee-----EEcC------CCccEEEECCCCCCCEEE
Confidence 3566666543 2357999999885322 2346777765541 1111 1110 112346789999999999
Q ss_pred EEeCCC-----CCceeEEEECCC
Q 011679 135 YKIGSG-----DSSREFWFQTPP 152 (479)
Q Consensus 135 Yrv~~~-----~~s~~~~f~T~p 152 (479)
+||..- +....+.+.|.-
T Consensus 346 ~~V~A~~~~G~s~p~s~~~~~~~ 368 (375)
T 3t1w_A 346 VSIVALNGREESPLLIGQQSTVS 368 (375)
T ss_dssp EEEEEEETTEECCCEEEEEECCC
T ss_pred EEEEEECCCCCCCceeeeeEEee
Confidence 999642 223455666643
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=85.41 E-value=2.1 Score=43.53 Aligned_cols=87 Identities=16% Similarity=0.186 Sum_probs=52.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+... ..+++.|+|......... .|+|......... .. . ... . ...-.+.+.|.+|+|+|.|
T Consensus 389 PP~nl~v~~~--s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~-~~--~-~~~--~-~~~~~~~v~l~~L~P~T~Y 459 (488)
T 2q7n_A 389 DPTSLKVKDI--NSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEV-RN--A-TIR--G-AEDSTYHVAVDKLNPYTAY 459 (488)
T ss_dssp CCEEEEEEEC--STTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEE-EE--E-EEE--C-CEEEEEEEEECSCCSSCCB
T ss_pred CCeEEEEEec--CCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCce-EE--E-EEe--c-CCCcEEEEEeCCCCCCceE
Confidence 5777776543 357899999987433323 4566554332111 00 0 000 0 0123556789999999999
Q ss_pred EEEeC-----C---CCCceeEEEECCCC
Q 011679 134 YYKIG-----S---GDSSREFWFQTPPK 153 (479)
Q Consensus 134 ~Yrv~-----~---~~~s~~~~f~T~p~ 153 (479)
..||. . +.||+...|+|++.
T Consensus 460 ~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 460 TFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp BCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred EEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 99984 2 25678888888753
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=85.13 E-value=0.9 Score=45.71 Aligned_cols=70 Identities=14% Similarity=0.266 Sum_probs=42.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--CCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
.|..+++.-.. .++++|+|..... ...-.|.|........ ......+ .-..+++|+||+|||.|..
T Consensus 372 ~~~~l~~~~~~--~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~----~~~~~~~------~~~~~~~i~~L~p~t~Y~~ 439 (461)
T 3csg_A 372 VPTNLEVVAAT--PTSLLISWDASYSSSVSYYRITYGETGGNSP----VQEFTVP------GSKSTATISGLSPGVDYTI 439 (461)
T ss_dssp SSCCCEEEEEC--SSCEEEECCCTTGGGCSEEEEEEEETTCCSC----CEEEEEE------TTCCEEEECSCCTTCEEEE
T ss_pred CCcceEEeccC--CCeEEEEecCCCCCcceEEEEEEEECCCCcc----ceEEEec------CCCceEEecCCCCCCEEEE
Confidence 46777777654 4789999987621 1123566766542210 0111111 1224689999999999999
Q ss_pred EeCC
Q 011679 136 KIGS 139 (479)
Q Consensus 136 rv~~ 139 (479)
+|..
T Consensus 440 ~v~a 443 (461)
T 3csg_A 440 TVYA 443 (461)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.26 E-value=14 Score=34.62 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=25.5
Q ss_pred EEEeCCCCCCCEEEEEeCC--------CCCceeEEEECCCC
Q 011679 121 QCLVDGLEYDTKYYYKIGS--------GDSSREFWFQTPPK 153 (479)
Q Consensus 121 ~v~l~gL~p~t~Y~Yrv~~--------~~~s~~~~f~T~p~ 153 (479)
.+.|.+|+|+|.|..+|.. |..|+...++|...
T Consensus 160 ~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~ 200 (306)
T 3s98_A 160 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVE 200 (306)
T ss_dssp EEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSC
T ss_pred eEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCC
Confidence 5789999999999999842 34677778887543
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.74 E-value=3.3 Score=36.43 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=37.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC---CCEEEEeecCCC-CceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG---PSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
+|..+.+.... ..+++.|.|.....+. .-.|+|....+. ....+.- ...-...+.|.+|+|+|.|
T Consensus 112 pP~~l~v~~~~-~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~Y 180 (206)
T 3v6o_A 112 PPSSVKAEITI-NIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEV----------YDAKSKSVSLPVPDLCAVY 180 (206)
T ss_dssp CCCSCEEEEET-TTTEEEEEC--------CEEEEEEEEESSSSCCCEEEEE----------CC---CEEEECCSCTTSCE
T ss_pred CCCceEeEEec-CCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEec----------ccCcceeEEeecCCCCCEE
Confidence 46666666542 3579999998764322 234666655421 2211110 0011235788999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
..||.+
T Consensus 181 ~vqVRa 186 (206)
T 3v6o_A 181 AVQVRC 186 (206)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999954
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.04 E-value=0.77 Score=47.51 Aligned_cols=88 Identities=17% Similarity=0.178 Sum_probs=50.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+.......+++.|+|........ -.|+|....+..+...... ....-...+.|++|+|+|.|
T Consensus 201 pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--------~~~~~~~~~~i~~L~p~t~Y 272 (589)
T 3l5h_A 201 PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTEY 272 (589)
T ss_dssp CCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT--------SSCSCCSEEEECSCCSSCCE
T ss_pred CCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc--------cCcCceeEEEECCCCCCCEE
Confidence 46666664333346799999987643222 3566665543222111000 00112235678999999999
Q ss_pred EEEeCC------C---CCceeEEEECCCC
Q 011679 134 YYKIGS------G---DSSREFWFQTPPK 153 (479)
Q Consensus 134 ~Yrv~~------~---~~s~~~~f~T~p~ 153 (479)
.+||.+ + .||....++|.+.
T Consensus 273 ~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 273 VFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp EEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 999953 2 2467777787664
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.61 E-value=6.1 Score=34.51 Aligned_cols=33 Identities=24% Similarity=0.186 Sum_probs=26.4
Q ss_pred EEEeCCCCCCCEEEEEeCC--------CCCceeEEEECCCC
Q 011679 121 QCLVDGLEYDTKYYYKIGS--------GDSSREFWFQTPPK 153 (479)
Q Consensus 121 ~v~l~gL~p~t~Y~Yrv~~--------~~~s~~~~f~T~p~ 153 (479)
.+.|.+|+|+|.|..+|.. +.+|+...++|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 3789999999999999842 35688888888754
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=81.54 E-value=6.6 Score=35.76 Aligned_cols=82 Identities=13% Similarity=0.240 Sum_probs=48.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC--CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG--PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
+|..+.+.... ...+.|.|....... .-.|+|....+........ .......|.+|.|++.|..
T Consensus 139 PP~nl~v~~~~--~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~------------~~~~~~~l~~L~p~~~Y~v 204 (247)
T 2erj_C 139 APENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRYTF 204 (247)
T ss_dssp CCEEEEEEESS--SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEE------------CSSCEEEESCCCTTSCEEE
T ss_pred CCCeEEEEECC--CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEec------------CCceEEEecCCCCCCEEEE
Confidence 46666666543 368999999874211 1247777654433322210 1123466799999999999
Q ss_pred EeCC---------C---CCceeEEEECCCC
Q 011679 136 KIGS---------G---DSSREFWFQTPPK 153 (479)
Q Consensus 136 rv~~---------~---~~s~~~~f~T~p~ 153 (479)
||++ + +||+...|.|.+.
T Consensus 205 qVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 205 RVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp EEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred EEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 9842 1 4677788887543
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.24 E-value=1.2 Score=45.28 Aligned_cols=86 Identities=19% Similarity=0.161 Sum_probs=52.3
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
+|..+.+... ..+++.|+|....... .-.|+|....+..... .+... ....-.+.+.|.+|+|+|.|
T Consensus 384 PP~nl~v~~~--~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~------~vsv~-~~~~~~~s~~l~~L~PgT~Y 454 (483)
T 3e0g_A 384 TPTSFKVKDI--NSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR------NVTIQ-GVENSSYLVALDKLNPYTLY 454 (483)
T ss_dssp CCEEEEECCS--SSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE------ECCCB-CCSSSBCCCCCCSCCSSSSC
T ss_pred CCeeeEEEEe--cCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE------EEEEe-ccCCceeEEEEeccCCCcEE
Confidence 5777766532 3578999999874322 3468887665432110 00000 00012335678999999999
Q ss_pred EEEeCC--------CCCceeEEEECCC
Q 011679 134 YYKIGS--------GDSSREFWFQTPP 152 (479)
Q Consensus 134 ~Yrv~~--------~~~s~~~~f~T~p 152 (479)
..||.+ +.||+...|+|++
T Consensus 455 ~vrVRA~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 455 TFRIRCSTETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp EEEEECCCSSCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEeeCCCCCcCCCCCceeeECCC
Confidence 999864 2467788888864
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=81.04 E-value=6.8 Score=34.42 Aligned_cols=86 Identities=14% Similarity=0.204 Sum_probs=44.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC---C----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP---G----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~---~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~ 130 (479)
+|..+.+... ......|+|...... . .-.|+|....+.-... .... . .......+.+.+|.||
T Consensus 100 PP~nl~~~~~--~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~-~~~~-~------~~~~~~~~~~~~L~p~ 169 (207)
T 1iar_B 100 APGNLTVHTN--VSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-IYNV-T------YLEPSLRIAASTLKSG 169 (207)
T ss_dssp CCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-EEEE-C------SSCCEEEECC-----C
T ss_pred CCCCeEEEEc--cCCCEEEEECCCCCccccccccEEEEEEEccCCCchhhe-eeee-e------cCCcEEEEEHHHCCCC
Confidence 4777777643 235799999987421 1 1357777655432111 1000 0 1234555677899999
Q ss_pred CEEEEEeCC------C---CCceeEEEECCCC
Q 011679 131 TKYYYKIGS------G---DSSREFWFQTPPK 153 (479)
Q Consensus 131 t~Y~Yrv~~------~---~~s~~~~f~T~p~ 153 (479)
+.|..||++ | +||+...|+|.++
T Consensus 170 ~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 170 ISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 999999953 3 5788899998764
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.54 E-value=8.3 Score=40.76 Aligned_cols=68 Identities=9% Similarity=0.113 Sum_probs=38.6
Q ss_pred CC-ceEEEEeecCCCCcEEEEEEcCCCC-CC---CEEEEeecCC--------CCceEEEeEEEEEeeecceeceEEEEEe
Q 011679 58 SP-QQVHITQGDYDGKAVIISWVTPHEP-GP---STVSYGTSAD--------KFDFTAEGTVNNYTFYKYKSGYIHQCLV 124 (479)
Q Consensus 58 ~P-~~v~l~~~~~~~~~~~v~W~t~~~~-~~---~~v~y~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~l 124 (479)
.| ..+.+.-- ..+++.|.|...... .. -.|+|....+ ..+..+.. .....+.|
T Consensus 162 ~P~~~l~v~~~--~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~~~~~~~w~~v~~------------~~~~~~~i 227 (680)
T 1zlg_A 162 KPRKELRFTEL--QSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQ------------TTDERVQL 227 (680)
T ss_pred cccccceEEec--cCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcCccccCceEEEEe------------cCCCeEEe
Confidence 45 45555532 357999999975321 11 3466654422 01111110 11224678
Q ss_pred CCCCCCCEEEEEeCC
Q 011679 125 DGLEYDTKYYYKIGS 139 (479)
Q Consensus 125 ~gL~p~t~Y~Yrv~~ 139 (479)
++|+|+|.|.|||..
T Consensus 228 ~~L~P~t~Y~frV~A 242 (680)
T 1zlg_A 228 TDIRPSRWYQFRVAA 242 (680)
T ss_pred CCCCCCCEEEEEEEE
Confidence 999999999999953
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 479 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 4e-93 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 8e-49 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 1e-46 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 5e-15 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 7e-08 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 2e-06 | |
| d1va9a1 | 109 | b.1.2.1 (A:8-116) Down syndrome cell adhesion mole | 0.002 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 0.002 | |
| d1x5ka1 | 111 | b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [ | 0.003 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 0.004 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 282 bits (723), Expect = 4e-93
Identities = 189/306 (61%), Positives = 231/306 (75%), Gaps = 3/306 (0%)
Query: 153 KIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG--AQTVLFLGDLSYADRYQFIDVGVRW 210
+ D Y FG+IGDLGQ+++S +TL HY S QTVLF+GDLSYADRY D VRW
Sbjct: 1 QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRW 59
Query: 211 DSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYA 270
D+WGRF ERS AYQPWIW+AGNHEIE+ + E PFK + +RY P+ AS+S+SP WY+
Sbjct: 60 DTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYS 119
Query: 271 IRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFME 330
I+RASAHIIVLSSYS + + TPQ+ WL++EL+KV R +TPWLIVLMH P+YNS HFME
Sbjct: 120 IKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFME 179
Query: 331 GESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITV 390
GE+MR FE+WFV+YKVDVVFAGHVHAYERS R+SN+ Y I++G C PV D+SAPVYIT+
Sbjct: 180 GEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITI 239
Query: 391 GDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFI 450
GD GN + PQP+YSAFREAS+GH +IKNRTHA + WNRN DG V DS
Sbjct: 240 GDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVW 299
Query: 451 LHNQYW 456
N++W
Sbjct: 300 FFNRHW 305
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 161 bits (408), Expect = 8e-49
Identities = 56/111 (50%), Positives = 78/111 (70%)
Query: 42 DIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFT 101
D+PLD++ F VP G+N+PQQVHITQGD G+A+IISWVT EPG S V Y + +
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRI 61
Query: 102 AEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPP 152
A+G ++ Y F+ Y SG+IH + L+Y+TKYYY++G +++R F F TPP
Sbjct: 62 AKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 155 bits (393), Expect = 1e-46
Identities = 62/114 (54%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
Query: 40 SIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPH-EPGPSTVSYGTSADKF 98
+D+P D++ FAVP G+N+PQQVHITQGDY+G+ VIISW TP+ + G + V Y + K
Sbjct: 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKS 65
Query: 99 DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPP 152
A GTV Y +Y Y S +IH C + LEYDTKYYY++G GD+ R+FWF TPP
Sbjct: 66 QKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 73.3 bits (178), Expect = 5e-15
Identities = 47/315 (14%), Positives = 89/315 (28%), Gaps = 48/315 (15%)
Query: 156 PDASYKFGIIGDLGQTYNSLSTLEHYMESGAQT-----------VLFLGDLSYADRYQFI 204
P +F +GD G N+ M + +L LGD Y
Sbjct: 1 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 60
Query: 205 DVGVRWDSWGRFVERSAAYQ--PWIWSAGNHEIEYMTY----MGEVVPFKSYLHRYPTPH 258
R+ V + + PW AGNH+ ++ ++ Y
Sbjct: 61 K-DKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLR 119
Query: 259 LASKSSSPLWYAIRRASAHIIVLSSYSPFVKY---------TPQWEWLREELKKVDREKT 309
S+ + + S + Q W++++L K
Sbjct: 120 FKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKE 176
Query: 310 PWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHY 369
+++V H P+++ E + +KV GH H + + L +
Sbjct: 177 DYVLVAGHYPVWSIAEHGPTHC--LVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGF 234
Query: 370 NISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRT 429
+S F P K + G + + G + +EI +
Sbjct: 235 VLSGAGNFMDPSKKHLRKVPNG--------------YLRFHFGAENSLGGFAYVEITPKE 280
Query: 430 HAFYHWNRNDDGKKV 444
+ + GK +
Sbjct: 281 MSVTYIEA--SGKSL 293
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 51.7 bits (122), Expect = 7e-08
Identities = 33/266 (12%), Positives = 61/266 (22%), Gaps = 53/266 (19%)
Query: 178 LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ-PWIWSAGNHEIE 236
+ + Q V+ LGD+ + + + A GNHE
Sbjct: 42 VLQWRRERVQCVVQLGDIIDGHNRRRDA---SDRALDTVMAELDACSVDVHHVWGNHEFY 98
Query: 237 YMTYMGEVVPFKSYLHRYPTPHLASK--SSSPLWYAIRRASAHIIVLSSYSPFVKYTP-- 292
+ + + R T + + + ++L +Y V
Sbjct: 99 NFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEE 158
Query: 293 --------------------------------------------QWEWLREELKKVDREK 308
Q +WL L D ++
Sbjct: 159 SEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ 218
Query: 309 TPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLH 368
++ H+P++ + A V AGH H R S
Sbjct: 219 ERV-LIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQ 277
Query: 369 YNISSGDCFPVPDKSAPVYITVGDGG 394
+ G P A + +
Sbjct: 278 HITLEGVIETPPHSHAFATAYLYEDR 303
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 46.6 bits (109), Expect = 2e-06
Identities = 16/201 (7%), Positives = 47/201 (23%), Gaps = 18/201 (8%)
Query: 178 LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWI-WSAGNHEIE 236
++ ++GA + +G+L + + + F + + G +
Sbjct: 25 VKLAPDTGADAIALIGNL--------MPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAP 76
Query: 237 YMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEW 296
Y+ E + H + W
Sbjct: 77 IWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHE--ALRYPAW 134
Query: 297 LREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVH 356
+ E K E + + + + + + + + +V
Sbjct: 135 VAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQGSHEVAHLIK----THNPLLVLVAGKG 190
Query: 357 AYERSYRISNLHYNISSGDCF 377
+ + + + + GD
Sbjct: 191 ---QKHEMLGASWVVVPGDLS 208
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.0 bits (82), Expect = 0.002
Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 10/107 (9%)
Query: 51 AVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYT 110
A P G P V + +++ ++W P + + V G + +
Sbjct: 6 AAPDG--PPMDVTLQ--PVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSI 61
Query: 111 FYKYKSGYIHQCLVDGLEYDTKYYYKI------GSGDSSREFWFQTP 151
+G +D L+ +Y + G+G SS E T
Sbjct: 62 VEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 37.5 bits (85), Expect = 0.002
Identities = 33/207 (15%), Positives = 55/207 (26%), Gaps = 17/207 (8%)
Query: 189 VLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFK 248
++F GDL+ +W GNH+ +
Sbjct: 49 IVFTGDLADKGEPAAYRKLRGLVEPFAAQLG----AELVWVMGNHDDRAELRKFLLDEAP 104
Query: 249 SYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREK 308
S + L ++ I Q WL EEL +
Sbjct: 105 SMAPLDRVCMIDGLRIIVLDTSVPGHHHGEI----------RASQLGWLAEELATPAPDG 154
Query: 309 TPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLH 368
T + H PI + + +AA V + AGH+H + +
Sbjct: 155 TILAL--HHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYST-NATFVGIP 211
Query: 369 YNISSGDCFPVPDKSAPVYITVGDGGN 395
+++S C+ A DG
Sbjct: 212 VSVASATCYTQDLTVAAGGTRGRDGAQ 238
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.7 bits (81), Expect = 0.003
Identities = 24/108 (22%), Positives = 33/108 (30%), Gaps = 12/108 (11%)
Query: 51 AVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYT 110
VP P+ V + + K +I++W P E Y
Sbjct: 9 LVPTS--PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEP 66
Query: 111 FYKYKSGYIHQCLVDGLEYDTKYYYKI------GSGDSSREFWFQTPP 152
G + L DT YY+KI G G S F+TP
Sbjct: 67 V----VGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 36.6 bits (83), Expect = 0.004
Identities = 30/195 (15%), Positives = 54/195 (27%), Gaps = 22/195 (11%)
Query: 189 VLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ-PWIWSAGNHEIEYMTYMGEVVPF 247
V+ GD+ R + + + + P GNH+ + F
Sbjct: 45 VVVSGDIVNCGR---------PEEYQVARQILGSLNYPLYLIPGNHDDKA--------LF 87
Query: 248 KSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDRE 307
YL P L S +++ A+ + + SS + K E + ++
Sbjct: 88 LEYLQPLC-PQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEG 146
Query: 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRA--AFESWFVRYKVDVVFAGHVHAYERSYRIS 365
+ MH P A + +F GH H+ +
Sbjct: 147 GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLT-MTQYR 205
Query: 366 NLHYNISSGDCFPVP 380
+ G VP
Sbjct: 206 QALISTLPGTVHQVP 220
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 479 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.92 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.9 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.89 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.86 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.85 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.64 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.63 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.26 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.24 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.12 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.05 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.02 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.96 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.56 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.53 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.51 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.0 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.85 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.55 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.53 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.35 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.26 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.24 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.2 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.19 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.18 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.16 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.07 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.01 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.01 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.88 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.87 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 96.85 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.82 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.79 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.78 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 96.66 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.65 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.63 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.61 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.58 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.57 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.56 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.52 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.5 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 96.5 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 96.5 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 96.49 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 96.49 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.49 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.46 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 96.43 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.42 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.36 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.36 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.35 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.27 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.25 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.23 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.21 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 96.21 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.19 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.16 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.12 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.11 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 96.08 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.08 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.05 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 96.02 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.02 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 96.02 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.02 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.01 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.0 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 95.98 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 95.79 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.77 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 95.76 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.74 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.73 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 95.65 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.65 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 95.57 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 95.55 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 95.52 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.47 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.43 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.34 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.31 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 95.3 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 95.24 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 95.15 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 94.65 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 93.97 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 93.52 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 92.95 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 92.79 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 91.91 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 91.51 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 90.07 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 89.96 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 89.91 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 89.7 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 89.4 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 89.22 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 89.08 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 89.06 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 87.89 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 85.41 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 82.84 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 80.92 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=3.7e-61 Score=469.68 Aligned_cols=307 Identities=62% Similarity=1.096 Sum_probs=270.3
Q ss_pred CCCCCeEEEEEecCCCCCCcHHHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCC
Q 011679 155 DPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232 (479)
Q Consensus 155 ~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GN 232 (479)
|++.++||+++||++.......++.++... +|||||++||++|+++....+ ..+|+.|.+.++++.+.+|+++++||
T Consensus 3 g~~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~-~~~wd~~~~~~~~~~~~~P~~~~~GN 81 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRWDTWGRFTERSVAYQPWIWTAGN 81 (312)
T ss_dssp CSSCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGC-THHHHHHHHHHHHHHTTSCEEECCCG
T ss_pred CCCCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccc-hHHHHHHHHHHHHHhhcceEEEeccc
Confidence 446799999999998876666677665433 899999999999988765544 67899999999999889999999999
Q ss_pred cccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeE
Q 011679 233 HEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWL 312 (479)
Q Consensus 233 HD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 312 (479)
||+......+....+..|..+|.||.++.....+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+
T Consensus 82 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 161 (312)
T d2qfra2 82 HEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWL 161 (312)
T ss_dssp GGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHTCCTTTCCEE
T ss_pred ccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHHHHHHHHHhhcCCCEE
Confidence 99875554445556778889999998877777788999999999999999998888889999999999999887889999
Q ss_pred EEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCC
Q 011679 313 IVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGD 392 (479)
Q Consensus 313 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~ 392 (479)
||++|+|+|++...+..+.+.+|+.|+++|.+++||++|+||+|.|||++|+++.+....++.+.++.+++||+|||+|+
T Consensus 162 iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G~ 241 (312)
T d2qfra2 162 IVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGD 241 (312)
T ss_dssp EEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECC
T ss_pred EEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEECc
Confidence 99999999998776666678899999999999999999999999999999999988777788888888899999999999
Q ss_pred CCCCCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCCCceeeeeeEEEEecccCChhhh
Q 011679 393 GGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRR 462 (479)
Q Consensus 393 gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g~~~~~D~f~i~~~~~~~~~~~ 462 (479)
||+.++....+.+++|.|+++++.+|||++|+|.|.|+|.|+|+++.||++++.|+|||.|++..|.+.|
T Consensus 242 gG~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~~i~~~~~~~~~~~ 311 (312)
T d2qfra2 242 AGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDS 311 (312)
T ss_dssp SCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEEEEECTTTCCCCCC
T ss_pred CCCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEEEEEeCCCCCCCCC
Confidence 9987776666777889999999999999999999999999999999999998789999999999887654
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=1.1e-33 Score=273.31 Aligned_cols=259 Identities=19% Similarity=0.276 Sum_probs=177.9
Q ss_pred CCeEEEEEecCCCCCCc----------HHHH-HHHHHhCCCEEEEcCcccccCcccccccchhhhHHHH-HHH-hhhccC
Q 011679 158 ASYKFGIIGDLGQTYNS----------LSTL-EHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGR-FVE-RSAAYQ 224 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~----------~~~l-~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~-~~~-~~~~~~ 224 (479)
..+||+++||+|..... ...+ +.+.+.+|||||++||++|.++..... +.+|..+.. .+. .....+
T Consensus 3 ~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 81 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-DKRFQETFEDVFSDPSLRNV 81 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-CTHHHHHTTTTSCSGGGTTC
T ss_pred CCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCccc-HHHHHHHHHHHhhhhhhcCC
Confidence 47999999999876432 1122 223344999999999999987754333 445543322 112 234578
Q ss_pred CeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEe------CCEEEEEEcCCC------------C
Q 011679 225 PWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRR------ASAHIIVLSSYS------------P 286 (479)
Q Consensus 225 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~------g~~~fi~Ldt~~------------~ 286 (479)
|+++++||||+..+.. ....+..+..++.+|. .||++.+ ++++|+++|+.. .
T Consensus 82 P~~~~~GNHD~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~ 151 (302)
T d1utea_ 82 PWHVLAGNHDHLGNVS--AQIAYSKISKRWNFPS--------PYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQP 151 (302)
T ss_dssp CEEECCCHHHHHSCHH--HHHHGGGTSTTEECCS--------SSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSC
T ss_pred ceEEeecccccccccc--cccchhhccccccCCC--------cccceeecccCCCCcEEEEEccceeEeecccccccccc
Confidence 9999999999864321 1112233444454542 4566654 369999999731 0
Q ss_pred -----CCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceee
Q 011679 287 -----FVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERS 361 (479)
Q Consensus 287 -----~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~ 361 (479)
...+.+|++||++.|++ ++++|+|+++|||+++.... ......+..+.++|++++|++|||||+|.|+|+
T Consensus 152 ~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~ 226 (302)
T d1utea_ 152 ERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYL 226 (302)
T ss_dssp CSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEE
T ss_pred cccccchhHHHHHHHHHHHHHh---hccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcCceEEEeCCCcceEEE
Confidence 01246899999999998 56789999999999987643 345677889999999999999999999999998
Q ss_pred eeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCC---CCcc-ceeeccccEEEEEEecccEEEEEEEE
Q 011679 362 YRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQ---PDYS-AFREASYGHSTLEIKNRTHAFYHWNR 437 (479)
Q Consensus 362 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~---p~~~-~~~~~~~Gf~~l~v~~~t~~~~~~~~ 437 (479)
.+ .+++.||++|+||............. +.+. ......+||++++| +.+.++++|+.
T Consensus 227 ~~------------------~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v-~~~~l~~~~~~ 287 (302)
T d1utea_ 227 QD------------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIE 287 (302)
T ss_dssp EC------------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEE
T ss_pred ec------------------CCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEEE-ECCEEEEEEEe
Confidence 63 46788999999887643211111111 1111 12235789999999 55678899875
Q ss_pred cCCCceeeeeeEEEEec
Q 011679 438 NDDGKKVATDSFILHNQ 454 (479)
Q Consensus 438 ~~~g~~~~~D~f~i~~~ 454 (479)
.+|++ +|+++|.++
T Consensus 288 -~~G~~--~~~~~~~~~ 301 (302)
T d1utea_ 288 -ASGKS--LFKTKLPRR 301 (302)
T ss_dssp -TTSCE--EEEEEECCC
T ss_pred -CCCCE--EEEEEecCC
Confidence 68987 599999765
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.92 E-value=5.9e-25 Score=178.42 Aligned_cols=111 Identities=50% Similarity=0.943 Sum_probs=102.5
Q ss_pred CcCCCCcccccCCCCCCCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEE
Q 011679 42 DIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQ 121 (479)
Q Consensus 42 ~~p~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (479)
++|+++.++++|++.++|+||||++++++.++|+|+|.|.+.+..+.|+||++++.+...+.|...++...+...+++|+
T Consensus 2 ~~p~~~~~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~ 81 (112)
T d2qfra1 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 81 (112)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEE
T ss_pred CCCCCCccccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEE
Confidence 57999999999999999999999999988899999999987788899999999998888999988877666667789999
Q ss_pred EEeCCCCCCCEEEEEeCCCCCceeEEEECCC
Q 011679 122 CLVDGLEYDTKYYYKIGSGDSSREFWFQTPP 152 (479)
Q Consensus 122 v~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p 152 (479)
|+|+||+|+|+|+|||+++++|++++|+|+|
T Consensus 82 v~Lt~L~P~T~Y~YrVG~~~~S~~~~F~T~P 112 (112)
T d2qfra1 82 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112 (112)
T ss_dssp EEECSCCTTCEEEEEECCSSSCEEEEEECCC
T ss_pred EEECCCCCCCEEEEEECCCCceeeEEEEcCC
Confidence 9999999999999999999999999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.90 E-value=1.7e-23 Score=171.64 Aligned_cols=112 Identities=55% Similarity=1.080 Sum_probs=100.9
Q ss_pred cCcCCCCcccccCCCCCCCceEEEEeecCCCCcEEEEEEcCC-CCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceE
Q 011679 41 IDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPH-EPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYI 119 (479)
Q Consensus 41 ~~~p~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (479)
.++|+.+.++.+|++..+|+||||++++++.++|+|+|.|.. .++.+.|+||++++.+...+.|+..++...+...+|+
T Consensus 7 ~~~p~~~~~~~~p~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~ 86 (119)
T d1xzwa1 7 VDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFI 86 (119)
T ss_dssp HBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEE
T ss_pred cccCCCCccccCCCCCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCeE
Confidence 368999999999988899999999999988899999999953 4456799999999999999999888877666678899
Q ss_pred EEEEeCCCCCCCEEEEEeCCCCCceeEEEECCC
Q 011679 120 HQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPP 152 (479)
Q Consensus 120 ~~v~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p 152 (479)
|+|+|+||+|+|+|+|||+++++|++++|+|+|
T Consensus 87 H~v~LtgL~P~T~Y~YrVG~~~~S~~~~F~T~P 119 (119)
T d1xzwa1 87 HHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119 (119)
T ss_dssp EEEEECCCCTTCEEEEEECCGGGCEEEEEECCC
T ss_pred EEEEECCCCCCCEEEEEECCCCccceEEEeCCC
Confidence 999999999999999999998899999999987
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.89 E-value=1.9e-22 Score=189.75 Aligned_cols=181 Identities=24% Similarity=0.226 Sum_probs=121.3
Q ss_pred CCeEEEEEecCCCCCC---------c----HHHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc
Q 011679 158 ASYKFGIIGDLGQTYN---------S----LSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA 222 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~---------~----~~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (479)
..|||++++|+|.... . ..+++.+.+. +|||||++||++.... ...++.+.+.+..+..
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~------~~~~~~~~~~l~~~~~ 76 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE------PAAYRKLRGLVEPFAA 76 (256)
T ss_dssp CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCC------HHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------hhHHHHHHHHhhhhhh
Confidence 4899999999997432 1 2234455443 7999999999996422 3345556666655532
Q ss_pred --cCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC----CCChHHHHH
Q 011679 223 --YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF----VKYTPQWEW 296 (479)
Q Consensus 223 --~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~----~~~~~Q~~W 296 (479)
.+|++.++||||.... +...+... .......+|.+..++++|++|||.... ....+|++|
T Consensus 77 ~~~~p~~~v~GNHD~~~~-----------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~w 142 (256)
T d2hy1a1 77 QLGAELVWVMGNHDDRAE-----------LRKFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGW 142 (256)
T ss_dssp HHTCEEEECCCTTSCHHH-----------HHHHTTCC---CCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHH
T ss_pred hcCCCEEEEcccccchhh-----------hhhhhccc---cccccccceEEEecccceeeeeeeecCCcCCcccHHHHHH
Confidence 5899999999995311 11111100 011234568889999999999986432 235789999
Q ss_pred HHHHHhhccCCCCCeEEEEeccccccCCCCcc-CcCHHHHHHHHHHHHHcCccEEEecccccceee
Q 011679 297 LREELKKVDREKTPWLIVLMHVPIYNSNEAHF-MEGESMRAAFESWFVRYKVDVVFAGHVHAYERS 361 (479)
Q Consensus 297 L~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~ 361 (479)
|++.|++. ..+.+||++|||++....... .......+.+.+++++++|+++||||+|.....
T Consensus 143 l~~~L~~~---~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~ 205 (256)
T d2hy1a1 143 LAEELATP---APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNA 205 (256)
T ss_dssp HHHHHTSC---CTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEE
T ss_pred HHHHHHhh---hccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhce
Confidence 99999873 345689999999986543210 011112457888999999999999999976543
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.86 E-value=1e-20 Score=179.27 Aligned_cols=182 Identities=13% Similarity=0.145 Sum_probs=117.3
Q ss_pred eEEEEEecCCCCCC---------cH----HHHHHHHHh--CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccC
Q 011679 160 YKFGIIGDLGQTYN---------SL----STLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ 224 (479)
Q Consensus 160 ~~f~~~gD~~~~~~---------~~----~~l~~i~~~--~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (479)
|+|+++||+|.... .. .+++.+.+. +||+||++||++.... ...|+.+.+.++.+ .+
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~------~~~y~~~~~~l~~l--~~ 72 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR------PEEYQVARQILGSL--NY 72 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC------HHHHHHHHHHHTTC--SS
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCc------chhHHHHHHHHhcc--CC
Confidence 68999999997432 11 234444433 7999999999996422 23344444445443 68
Q ss_pred CeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC----CCChHHHHHHHHH
Q 011679 225 PWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF----VKYTPQWEWLREE 300 (479)
Q Consensus 225 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~----~~~~~Q~~WL~~~ 300 (479)
|+++++||||..... . ..+..+..... .......|.++.++++||+||+.... ....+|++||+++
T Consensus 73 p~~~i~GNHD~~~~~--~--~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~ 142 (271)
T d3d03a1 73 PLYLIPGNHDDKALF--L--EYLQPLCPQLG------SDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQ 142 (271)
T ss_dssp CEEEECCTTSCHHHH--H--HHHGGGSGGGC------SCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHH
T ss_pred CEEEEecCccchHHH--H--HHhhhhhhccc------cccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHH
Confidence 999999999974210 0 00011111110 11123467788889999999996432 2468999999999
Q ss_pred HhhccCCCCCeEEEEeccccccCCCCccC-cCHHHHHHHHHHHHHc-CccEEEecccccceeee
Q 011679 301 LKKVDREKTPWLIVLMHVPIYNSNEAHFM-EGESMRAAFESWFVRY-KVDVVFAGHVHAYERSY 362 (479)
Q Consensus 301 L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~ 362 (479)
|++. + .+++||++|||++........ ......+++.++++++ +|+++||||+|......
T Consensus 143 L~~~--~-~~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~ 203 (271)
T d3d03a1 143 LFEG--G-DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ 203 (271)
T ss_dssp HHHH--T-TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE
T ss_pred Hhhh--c-cceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhceE
Confidence 9984 2 345788899998765542211 1112245788899997 69999999999865543
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.85 E-value=1.1e-20 Score=181.15 Aligned_cols=236 Identities=18% Similarity=0.112 Sum_probs=141.0
Q ss_pred CeEEEEEecCCCCCC----------------cH----HHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHH
Q 011679 159 SYKFGIIGDLGQTYN----------------SL----STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVE 218 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~----------------~~----~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~ 218 (479)
-|||++++|+|.... .. ++++.+.+.+|||||++||++....... ......+.+..+
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~---~~~~~~~~~~~~ 79 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRR---DASDRALDTVMA 79 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHT---TCHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcch---hHHHHHHHHHHH
Confidence 489999999997521 01 2234455569999999999996432211 122233444444
Q ss_pred hhhc-cCCeEEcCCCcccccccCCCcccccccccccc--ccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCC---------
Q 011679 219 RSAA-YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRY--PTPHLASKSSSPLWYAIRRASAHIIVLSSYSP--------- 286 (479)
Q Consensus 219 ~~~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~--------- 286 (479)
.+.. .+|+++++||||..................++ ..............+....++.+|+.+|+...
T Consensus 80 ~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (320)
T d2nxfa1 80 ELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEES 159 (320)
T ss_dssp HHHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTS
T ss_pred HHHHcCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCcccccccccccc
Confidence 4433 68999999999985321100000000000000 00000011122345677889999999987310
Q ss_pred -------------------------------------CCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccC
Q 011679 287 -------------------------------------FVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFM 329 (479)
Q Consensus 287 -------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~ 329 (479)
...+.+|++||+++|+++. ....++|+++|+|++........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~-~~~~~viv~~H~p~~~~~~~~~~ 238 (320)
T d2nxfa1 160 EKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSD-HKQERVLIFSHLPVHPCAADPIC 238 (320)
T ss_dssp HHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHH-HHTCEEEEEESSCCCTTSSCGGG
T ss_pred cccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhh-hcCCceEEEECCCCccCCCCCcc
Confidence 0125789999999998754 23457899999999865543211
Q ss_pred cCHHHHHHHHHHHHHc-CccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 011679 330 EGESMRAAFESWFVRY-KVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQP 408 (479)
Q Consensus 330 ~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~~~~~~~~~~~p 408 (479)
.....+++.++|.++ +|+++|+||+|..++.. ..+|..||++|+.. +.
T Consensus 239 -~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~------------------~~~g~~~i~~~~~~--~~---------- 287 (320)
T d2nxfa1 239 -LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT------------------DSSGAQHITLEGVI--ET---------- 287 (320)
T ss_dssp -SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE------------------CTTSCEEEECCCGG--GC----------
T ss_pred -chhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee------------------ccCCCEEEECCeee--cC----------
Confidence 112346788899998 59999999999877653 23667788876431 11
Q ss_pred CccceeeccccEEEEEEecccEEEEEE
Q 011679 409 DYSAFREASYGHSTLEIKNRTHAFYHW 435 (479)
Q Consensus 409 ~~~~~~~~~~Gf~~l~v~~~t~~~~~~ 435 (479)
.....+|..++|..+. +.++-
T Consensus 288 -----~~~~~~~~~~~v~~d~-~~~~~ 308 (320)
T d2nxfa1 288 -----PPHSHAFATAYLYEDR-MVMKG 308 (320)
T ss_dssp -----CTTSCEEEEEEECSSE-EEEEE
T ss_pred -----CCCCCCEEEEEEECCE-EEEEE
Confidence 0123588999996553 55543
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.64 E-value=6.9e-16 Score=140.73 Aligned_cols=176 Identities=11% Similarity=0.068 Sum_probs=106.7
Q ss_pred CeEEEEEecCCCCCCcHHH-HHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-cCCeEEcCCCcccc
Q 011679 159 SYKFGIIGDLGQTYNSLST-LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQPWIWSAGNHEIE 236 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~~~-l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~v~GNHD~~ 236 (479)
.-+|+++||+|.+....+. ++.+.+.++|+||++||++..... . ..+..+++.+.. ..|+++++||||..
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~-----~---~~~~~~~~~L~~~~~pv~~i~GNHD~~ 76 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAK-----S---RDYAAFFRILSEAHLPTAYVPGPQDAP 76 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCC-----H---HHHHHHHHHHGGGCSCEEEECCTTSCS
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCcc-----c---hHHHHhhhhhccccceEEEEecCCCch
Confidence 4578999999987554333 334445599999999999854321 1 223334444433 68999999999974
Q ss_pred cccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCC----------CCCChHHHHHHHHHHhhccC
Q 011679 237 YMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP----------FVKYTPQWEWLREELKKVDR 306 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~----------~~~~~~Q~~WL~~~L~~~~~ 306 (479)
...... ..+......+.. ......+.+..+++.++.++.... ......|..|+.+.++..
T Consensus 77 ~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-- 146 (228)
T d1uf3a_ 77 IWEYLR-----EAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL-- 146 (228)
T ss_dssp HHHHHH-----HHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGS--
T ss_pred hhhhhh-----hhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhc--
Confidence 211000 000000000000 000122455667888888765211 112467899999888873
Q ss_pred CCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccc
Q 011679 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAY 358 (479)
Q Consensus 307 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y 358 (479)
...+.|+++|+|++.....+. . .+.+.++++++++++++|||+|..
T Consensus 147 -~~~~~il~~H~p~~~~~~~~~-~----~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 147 -KDYPKIFLFHTMPYHKGLNEQ-G----SHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp -CSCCEEEEESSCBCBTTTBTT-S----BHHHHHHHHHHCCSEEEECCSSCE
T ss_pred -cCCceEEEEeeeccCcccccc-c----cHHHHHHHHhcCCcEEEEcccccc
Confidence 334579999999986544321 1 135667788999999999999964
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.63 E-value=9.4e-16 Score=142.26 Aligned_cols=188 Identities=13% Similarity=0.118 Sum_probs=105.8
Q ss_pred CeEEEEEecCCCCCCcHHHHH-HHHHhCCCEEEEcCcccccCcccccccc-------------------hhhhHHHHHHH
Q 011679 159 SYKFGIIGDLGQTYNSLSTLE-HYMESGAQTVLFLGDLSYADRYQFIDVG-------------------VRWDSWGRFVE 218 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~~~l~-~i~~~~pd~vl~~GD~~y~~~~~~~~~~-------------------~~~~~~~~~~~ 218 (479)
+.||+++||+|......+.+. .+.+.+||+||++||++....... ++. ...+.+...++
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~ 80 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEK-EYERAHLARREPNRKVIHENEHYIIETLDKFFR 80 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHH-HHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCCCH-HHHHHHHhhhhhceeeeccccccchhhHHHHHH
Confidence 579999999998776555543 445559999999999996432110 000 00012233344
Q ss_pred hhhc-cCCeEEcCCCcccccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCC-------C--
Q 011679 219 RSAA-YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF-------V-- 288 (479)
Q Consensus 219 ~~~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~-------~-- 288 (479)
.+.. .+|+++++||||........ ..+......+. .......+.+..+++.|+.+++.... .
T Consensus 81 ~L~~~~~pv~~i~GNHD~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (257)
T d2yvta1 81 EIGELGVKTFVVPGKNDAPLKIFLR-----AAYEAETAYPN---IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLK 152 (257)
T ss_dssp HHHTTCSEEEEECCTTSCCHHHHHH-----HHHHTTTTCTT---EEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCE
T ss_pred HHHhcCCcEEEEeCCCcchhhHHHH-----Hhccccccccc---cccccceeEEecCCeEEEEeccccCCccccchhhhh
Confidence 4433 68999999999964211000 01111000000 00011233444577778777652111 0
Q ss_pred CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCc--CHHHHHHHHHHHHHcCccEEEecccccc
Q 011679 289 KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFME--GESMRAAFESWFVRYKVDVVFAGHVHAY 358 (479)
Q Consensus 289 ~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~~~VdlvlsGH~H~y 358 (479)
....+..|++..++. .+...+|+++|+|++......... .......+.+++++++++++++||+|..
T Consensus 153 ~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~ 221 (257)
T d2yvta1 153 YPRWYVEYILKFVNE---LKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKG 221 (257)
T ss_dssp EEHHHHHHHGGGGGG---SCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCE
T ss_pred hhhhHHHHHHHHhhh---cccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCC
Confidence 113344455555554 445568999999997654321111 1112356788889999999999999964
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.26 E-value=4e-10 Score=98.49 Aligned_cols=177 Identities=14% Similarity=0.145 Sum_probs=104.0
Q ss_pred eEEEEEecCCCCCCc---HHHHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccc
Q 011679 160 YKFGIIGDLGQTYNS---LSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~---~~~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
||++++||+|..... ...+.++.+. ++|.|+|+||++. ....+.++.+ ..|++++.||||.
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~-------------~e~l~~l~~~--~~~v~~V~GN~D~ 65 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-------------KESYDYLKTL--AGDVHIVRGDFDE 65 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-------------HHHHHHHHHH--CSEEEECCCTTCC
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccc-------------hhhHHHHHhh--CCceEEEeCCcCc
Confidence 689999999976433 2334444333 7999999999982 1122334333 3478999999996
Q ss_pred ccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 011679 236 EYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVL 315 (479)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 315 (479)
... +| ..-.+.+++ ++|.+
T Consensus 66 ~~~-----------------~p---------~~~~~~~~g-----------------------------------~~i~~ 84 (182)
T d1z2wa1 66 NLN-----------------YP---------EQKVVTVGQ-----------------------------------FKIGL 84 (182)
T ss_dssp CTT-----------------SC---------SEEEEEETT-----------------------------------EEEEE
T ss_pred ccc-----------------cc---------eEEEEEEcC-----------------------------------cEEEE
Confidence 421 11 111122222 34666
Q ss_pred eccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCC
Q 011679 316 MHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGN 395 (479)
Q Consensus 316 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~ 395 (479)
.|.+.+..... .+.+..++++.++|++|+||+|...- .. -+++++|-.|+.|.
T Consensus 85 ~Hg~~~~~~~~--------~~~l~~~~~~~~~divi~GHTH~p~~-~~------------------~~~~~~iNPGSv~~ 137 (182)
T d1z2wa1 85 IHGHQVIPWGD--------MASLALLQRQFDVDILISGHTHKFEA-FE------------------HENKFYINPGSATG 137 (182)
T ss_dssp ECSCCCCBTTC--------HHHHHHHHHHHSSSEEECCSSCCCEE-EE------------------ETTEEEEECCCTTC
T ss_pred EeCCCCCCCCC--------HHHHHHHHhccCCCEEEECCcCcceE-EE------------------ECCEEEEeCCCCCC
Confidence 67654432211 23456677788999999999998533 22 14567777887665
Q ss_pred CCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCCCceeeeeeEEEEe
Q 011679 396 QEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 453 (479)
Q Consensus 396 ~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g~~~~~D~f~i~~ 453 (479)
+.+. ... +....|+.|++.+.+ +.+..++-+++++ ..+.+++.|
T Consensus 138 pr~~--~~~----------~~~~syaild~~~~~-v~~~~~~l~~~~v-~~~~~~~~~ 181 (182)
T d1z2wa1 138 AYNA--LET----------NIIPSFVLMDIQAST-VVTYVYQLIGDDV-KVERIEYKK 181 (182)
T ss_dssp CCCS--SCS----------CCCCEEEEEEEETTE-EEEEEEEEETTEE-EEEEEEEEC
T ss_pred CCCC--CCC----------CCCCEEEEEEEeCCE-EEEEEEEecCCcE-EEEEEEEEc
Confidence 4321 001 112358999996554 4444444344554 467777765
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.24 E-value=1.1e-09 Score=96.73 Aligned_cols=183 Identities=15% Similarity=0.203 Sum_probs=104.0
Q ss_pred EEEEecCCCCCCc---HHHHHHHHH-hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccccc
Q 011679 162 FGIIGDLGQTYNS---LSTLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEY 237 (479)
Q Consensus 162 f~~~gD~~~~~~~---~~~l~~i~~-~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~~ 237 (479)
++++||+|..... ...+..+.+ .++|.|+++||++.. ...+.++.+ ..+++++.||||...
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~~-------------~~l~~l~~l--~~~v~~V~GN~D~~~ 70 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ-------------EYVEMLKNI--TKNVYIVSGDLDSAI 70 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH-------------HHHHHHHHH--CSCEEECCCTTCCSC
T ss_pred EEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCCH-------------HHHHHHHhh--CCCEEEEcCCCCcch
Confidence 7999999975432 234555544 489999999999821 122334433 246889999999753
Q ss_pred ccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEec
Q 011679 238 MTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMH 317 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H 317 (479)
.... ..+... +| ....+.+++ ++|.+.|
T Consensus 71 ~~~~------~~~~~~--lp---------~~~~~~~~~-----------------------------------~~i~l~H 98 (193)
T d2a22a1 71 FNPD------PESNGV--FP---------EYVVVQIGE-----------------------------------FKIGLMH 98 (193)
T ss_dssp CBCC------GGGTBC--CC---------SEEEEEETT-----------------------------------EEEEEEC
T ss_pred hhhh------HHHHhh--CC---------ccEEEEECC-----------------------------------EEEEEEe
Confidence 1100 011111 11 223343443 3455556
Q ss_pred cccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCCCC
Q 011679 318 VPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQE 397 (479)
Q Consensus 318 ~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~~~ 397 (479)
...+.... + .+.+..++.+.++|++++||+|...... -+++++|-.|+-|...
T Consensus 99 ~~~~~~~~----~----~~~l~~~~~~~~~dvvi~GHTH~~~~~~-------------------~~g~~~iNPGSvg~pr 151 (193)
T d2a22a1 99 GNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVFE-------------------KNGKLFLNPGTATGAF 151 (193)
T ss_dssp STTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEEE-------------------ETTEEEEECCCSSCCC
T ss_pred ccCCCCCC----C----HHHHHHHHhhcCCCEEEEcCccCceEEE-------------------ECCEEEEECCCCCcCc
Confidence 43322111 1 2356677788899999999999854322 1456677778776442
Q ss_pred CCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCCCceeeeeeEEEE
Q 011679 398 GLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILH 452 (479)
Q Consensus 398 ~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g~~~~~D~f~i~ 452 (479)
.. ... +....|+.|++.+. .+.+++++-.++++ .++...+.
T Consensus 152 ~~--~~~----------~~~~syaild~~~~-~v~v~~y~l~~~~~-~~~~~~~~ 192 (193)
T d2a22a1 152 SA--LTP----------DAPPSFMLMALQGN-KVVLYVYDLRDGKT-NVAMSEFS 192 (193)
T ss_dssp CT--TST----------TCCCEEEEEEEETT-EEEEEEEEEETTEE-EEEEEEEE
T ss_pred CC--CCC----------CCCCEEEEEEEECC-EEEEEEEEecCCeE-EEEEEEEe
Confidence 11 001 12347999999654 46666666556664 34544443
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.12 E-value=4.2e-09 Score=91.13 Aligned_cols=158 Identities=13% Similarity=0.117 Sum_probs=97.9
Q ss_pred CeEEEEEecCCCCCCcHHHHHHHH---HhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCccc
Q 011679 159 SYKFGIIGDLGQTYNSLSTLEHYM---ESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~~~~~l~~i~---~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~ 235 (479)
..||+++||+|.+. .+++++. ..++|.|+|+||+.+.... . ...|+.++.||||.
T Consensus 3 ~~kI~viSD~Hgn~---~al~~vl~~~~~~~D~iih~GD~~~~~~~---------~----------~~~~~~~V~GN~D~ 60 (173)
T d3ck2a1 3 KQTIIVMSDSHGDS---LIVEEVRDRYVGKVDAVFHNGDSELRPDS---------P----------LWEGIRVVKGNMDF 60 (173)
T ss_dssp CEEEEEECCCTTCH---HHHHHHHHHHTTTSSEEEECSCCCSCTTC---------G----------GGTTEEECCCTTCC
T ss_pred CCEEEEEeccCCCH---HHHHHHHHHhhcCCCEEEECCcccCcccc---------h----------hhcCCeEEecCccc
Confidence 57999999999653 3333333 2379999999998864221 1 11378899999997
Q ss_pred ccccCCCccccccccccccccCcCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 011679 236 EYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVL 315 (479)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~yysf~~g~~~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 315 (479)
... .| ....+++++ .+|.+
T Consensus 61 ~~~-----------------~~---------~~~~~~~~~-----------------------------------~~~~~ 79 (173)
T d3ck2a1 61 YAG-----------------YP---------ERLVTELGS-----------------------------------TKIIQ 79 (173)
T ss_dssp STT-----------------CC---------SEEEEEETT-----------------------------------EEEEE
T ss_pred ccc-----------------cc---------eEEEEEECC-----------------------------------EEEEE
Confidence 410 01 111222222 35666
Q ss_pred eccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEEeCCCCC
Q 011679 316 MHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGN 395 (479)
Q Consensus 316 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~G~gG~ 395 (479)
.|...+..... . +.+...+.+.++|++|+||+|...... .+++.+|-.|+-|.
T Consensus 80 ~Hg~~~~~~~~----~----~~l~~~~~~~~~dvvi~GHTH~p~~~~-------------------~~~~~~iNPGSvg~ 132 (173)
T d3ck2a1 80 THGHLFDINFN----F----QKLDYWAQEEEAAICLYGHLHVPSAWL-------------------EGKILFLNPGSISQ 132 (173)
T ss_dssp ECSGGGTTTTC----S----HHHHHHHHHTTCSEEECCSSCCEEEEE-------------------ETTEEEEEECCSSS
T ss_pred EeCcCCCCCCC----H----HHHHHHHHhcCCCEEEeCCcCcceEEE-------------------ECCEEEEECCCCCC
Confidence 67655543221 1 245666778899999999999854332 14577888888876
Q ss_pred CCCCCCCCCCCCCCccceeeccccEEEEEEecccEEEEEEEEcCCCce
Q 011679 396 QEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKK 443 (479)
Q Consensus 396 ~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~t~~~~~~~~~~~g~~ 443 (479)
+.. ..+ ...|+.|++.+. .+.++|+. .++++
T Consensus 133 pr~-----~~~----------~~syail~~~~~-~~~v~~~~-~d~~~ 163 (173)
T d3ck2a1 133 PRG-----TIR----------ECLYARVEIDDS-YFKVDFLT-RDHEV 163 (173)
T ss_dssp CCT-----TCC----------SCCEEEEEECSS-EEEEEEEC-TTSCB
T ss_pred CCC-----CCC----------CCEEEEEEEeCC-EEEEEEEE-eCCeE
Confidence 431 111 235889998554 56788875 46654
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.05 E-value=2.1e-10 Score=109.60 Aligned_cols=73 Identities=18% Similarity=0.237 Sum_probs=48.5
Q ss_pred eEEEEEecCCCCCCc----------HHHHHH----HHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-cC
Q 011679 160 YKFGIIGDLGQTYNS----------LSTLEH----YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQ 224 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~----------~~~l~~----i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 224 (479)
|||+++||+|.+... ...++. +.+.++|+||++||++...... ......+.+.++.+.. .+
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~----~~~~~~~~~~~~~l~~~~i 76 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPS----PGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCC----HHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCC----HHHHHHHHHHHhhHHhcCC
Confidence 699999999986432 223333 3345999999999998532211 1112334455665543 68
Q ss_pred CeEEcCCCcccc
Q 011679 225 PWIWSAGNHEIE 236 (479)
Q Consensus 225 P~~~v~GNHD~~ 236 (479)
|++.++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (333)
T d1ii7a_ 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCCCccc
Confidence 999999999975
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.02 E-value=4.7e-11 Score=109.70 Aligned_cols=69 Identities=10% Similarity=0.076 Sum_probs=46.4
Q ss_pred eEEEEEecCCCCCCcH-HHHHHHHHh-----CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCc
Q 011679 160 YKFGIIGDLGQTYNSL-STLEHYMES-----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~-~~l~~i~~~-----~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 233 (479)
++|+++||+|.+.... ..++.+.+. ++|.+|++||++..... -....+.+..+..+.++++++|||
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~--------~~evi~~l~~l~~~~~v~~v~GNH 72 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY--------PKEVIEVIKDLTKKENVKIIRGKY 72 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC--------HHHHHHHHHHHHHHSCEEEECCHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCC--------cHHHHHHHHHHhhcCCEEEEeccH
Confidence 4899999999654332 334444332 56999999999964221 133445555565566899999999
Q ss_pred ccc
Q 011679 234 EIE 236 (479)
Q Consensus 234 D~~ 236 (479)
|..
T Consensus 73 D~~ 75 (251)
T d1nnwa_ 73 DQI 75 (251)
T ss_dssp HHH
T ss_pred HHH
Confidence 974
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.96 E-value=4.8e-09 Score=90.03 Aligned_cols=61 Identities=21% Similarity=0.281 Sum_probs=43.6
Q ss_pred eEEEEEecCCCCCCc-HHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhh-ccCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNS-LSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-AYQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~-~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~v~GNHD~~ 236 (479)
||++++||+|.+... .++++.+.+.++|.|+++||++.. .. ++.+. ...|++.+.||||..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~------------~~----~~~l~~~~~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL------------FV----IKEFENLNANIIATYGNNDGE 63 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST------------HH----HHHGGGCSSEEEEECCTTCCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH------------HH----HHHHhhcCccEEEEccccccc
Confidence 699999999976443 344555566699999999999832 11 22222 246899999999975
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.56 E-value=2.2e-07 Score=81.06 Aligned_cols=45 Identities=20% Similarity=0.311 Sum_probs=34.1
Q ss_pred EEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccce
Q 011679 312 LIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYE 359 (479)
Q Consensus 312 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 359 (479)
.|+++|.|+...... ........+..+..+.+++++|+||+|...
T Consensus 108 ~i~l~H~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 108 RILLSHYPAKDPITE---RYPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp EEEEESSCSSCSSCC---SCHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred EEEEEeCCCcccccc---ccccchhHHHHHHHhcCceEEEEeeccCCc
Confidence 699999999654432 223445677788899999999999999643
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.53 E-value=9.2e-07 Score=84.43 Aligned_cols=186 Identities=15% Similarity=0.112 Sum_probs=91.6
Q ss_pred CeEEEEEecCCCCCC-------cH----HHHHHHHH----hCCC-EEEEcCcccccCcccccccchhhhHHHHHHHhhhc
Q 011679 159 SYKFGIIGDLGQTYN-------SL----STLEHYME----SGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA 222 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~-------~~----~~l~~i~~----~~pd-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (479)
.++|++.+|+|.... .. ..++.+.+ .+++ ++|.+||++....... ..+.....+.+..+-
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~---~~~g~~~~~~mn~~g- 83 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESD---LQDAEPDFRGMNLVG- 83 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHH---TTTTHHHHHHHHHHT-
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHH---HhCChHHHHHHHhcC-
Confidence 689999999996421 11 12333332 3555 5666999985432111 111222333333331
Q ss_pred cCCeEEcCCCcccccccCCCccccccccccccccCcCC--------CCCCCCcEEEEEeCCEE--EEEEcCCCC------
Q 011679 223 YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLA--------SKSSSPLWYAIRRASAH--IIVLSSYSP------ 286 (479)
Q Consensus 223 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~--------~~~~~~~yysf~~g~~~--fi~Ldt~~~------ 286 (479)
.=..++||||+++... .+..+......|.-. .......|.-++.++++ ||.+-+...
T Consensus 84 --~Da~~~GNHEfd~G~~-----~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~~ 156 (337)
T d1usha2 84 --YDAMAIGNHEFDNPLT-----VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNP 156 (337)
T ss_dssp --CCEEECCGGGGSSCHH-----HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSC
T ss_pred --CeEEEechhhhccchH-----HHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccCc
Confidence 2256789999964211 111111111222110 00112356677888854 566644211
Q ss_pred -CC------CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccce
Q 011679 287 -FV------KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYE 359 (479)
Q Consensus 287 -~~------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 359 (479)
.. ...+..+...++|++. .++..+|+++|.+............ ....+...+...+||++|.||.|...
T Consensus 157 ~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~--~~~~la~~~~~~~vD~IvgGHsH~~~ 232 (337)
T d1usha2 157 EYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAP--GDVEMARALPAGSLAMIVGGHSQDPV 232 (337)
T ss_dssp CCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCC--CHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred ccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccc--hhHHHHHhCcccCceEEecCccCccc
Confidence 00 1123333333445432 4577899999998754332111000 01223333344589999999999753
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.51 E-value=3.2e-07 Score=79.51 Aligned_cols=74 Identities=24% Similarity=0.247 Sum_probs=45.7
Q ss_pred eEEEEEecCCCCCCc-HHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhc-cCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNS-LSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~-~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~v~GNHD~~ 236 (479)
+|++++||+|..... .+.++.+.+.++|.+|++||++......... ... .-...++.+.. ..|++.+.||||..
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~-~~~--~~~~~~~~~~~~~~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALP-EGY--APAKVVERLNEVAHKVIAVRGNCDSE 77 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCC-TTB--CHHHHHHHHHTTGGGEEECCCTTCCH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhh-hcc--CcHHHHHHHHhcCCcEEEecCCCCch
Confidence 799999999965433 2334445556999999999998543222111 000 11122333322 45899999999975
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.00 E-value=1.3e-05 Score=75.72 Aligned_cols=182 Identities=15% Similarity=0.202 Sum_probs=85.9
Q ss_pred CCCeEEEEEecCCCCCC----------c---HHH----HHHHHH-hCCC-EEEEcCcccccCcccccccchhhhHHHHHH
Q 011679 157 DASYKFGIIGDLGQTYN----------S---LST----LEHYME-SGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFV 217 (479)
Q Consensus 157 ~~~~~f~~~gD~~~~~~----------~---~~~----l~~i~~-~~pd-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~ 217 (479)
-..++|++.+|+|.... . ... +++.++ .+++ ++|.+||++......... ..+.....+.+
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~-~~~G~~~~~~m 87 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDIT-SPNGLKSTPIF 87 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSS-SSTTTTTHHHH
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhc-ccCChHHHHHH
Confidence 36899999999996421 0 111 222222 2566 566899999653321100 11111222222
Q ss_pred HhhhccCCe-EEcCCCcccccccCCCccccccccccccccCcCCC--------C---CCCCcEEEEEeC--CEEEEEEcC
Q 011679 218 ERSAAYQPW-IWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS--------K---SSSPLWYAIRRA--SAHIIVLSS 283 (479)
Q Consensus 218 ~~~~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~---~~~~~yysf~~g--~~~fi~Ldt 283 (479)
..+++ .+++||||+++.... ...+......+..|.-.+ . .....|..+..+ ++.++.+..
T Consensus 88 ----n~lgyDa~t~GNHEfd~g~~~--l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~ 161 (322)
T d3c9fa2 88 ----IKQDYDLLTIGNHELYLWENS--KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGF 161 (322)
T ss_dssp ----TTSCCSEECCCGGGSSSHHHH--HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEEC
T ss_pred ----hccCCcEEeecceecccchHH--HHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEee
Confidence 33444 788999998642110 000111111112221110 0 112345566664 477777765
Q ss_pred CCCCC---CC--------hHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH---cCccE
Q 011679 284 YSPFV---KY--------TPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR---YKVDV 349 (479)
Q Consensus 284 ~~~~~---~~--------~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~---~~Vdl 349 (479)
..... .+ ..+..|+++.++ .+..-+|+++|.++-... . ... .....+.+ ..+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~------~-~~~-~~~~~la~~~~~~~~~ 229 (322)
T d3c9fa2 162 LFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW------G-EFY-QVHQYLRQFFPDTIIQ 229 (322)
T ss_dssp CCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT------C-HHH-HHHHHHHHHCTTSEEE
T ss_pred ccccccCCCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc------c-ccc-hHHHHHHHhCCCCCEE
Confidence 32211 10 112234444333 457789999998763221 1 111 12222222 23446
Q ss_pred EEeccccc
Q 011679 350 VFAGHVHA 357 (479)
Q Consensus 350 vlsGH~H~ 357 (479)
+|.||+|.
T Consensus 230 iigGHsH~ 237 (322)
T d3c9fa2 230 YFGGHSHI 237 (322)
T ss_dssp EEECSSCC
T ss_pred Eecccccc
Confidence 89999996
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.85 E-value=0.00029 Score=65.48 Aligned_cols=174 Identities=18% Similarity=0.133 Sum_probs=88.6
Q ss_pred CeEEEEEecCCCCCC--------------cHH----HHHHHHHhCC-CEEEEcCcccccCcccccccchhhhHHHHHHHh
Q 011679 159 SYKFGIIGDLGQTYN--------------SLS----TLEHYMESGA-QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER 219 (479)
Q Consensus 159 ~~~f~~~gD~~~~~~--------------~~~----~l~~i~~~~p-d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~ 219 (479)
.++|+..+|+|.... ... .++++.+..+ -++|.+||++....... ..+.....+.+..
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~~~---~~~g~~~~~~~n~ 78 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFN---QYRGLADRYFMHR 78 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHH---HHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHhHh---hhcchhHHHHHHh
Confidence 468999999986431 122 2344444444 47889999996432110 0111122222332
Q ss_pred hhccCCeEEcCCCcccccccCCCccccccccccccccCcCC----------CCCCCCcEEEEEeCCEE--EEEEcCCC--
Q 011679 220 SAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLA----------SKSSSPLWYAIRRASAH--IIVLSSYS-- 285 (479)
Q Consensus 220 ~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~~----------~~~~~~~yysf~~g~~~--fi~Ldt~~-- 285 (479)
+ -.=..++||||+.+... .+..+.....+|.-. .......|..++.++++ ||++-+..
T Consensus 79 ~---gyDa~~~GNHEfd~G~~-----~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~ 150 (302)
T d2z1aa2 79 L---RYRAMALGNHEFDLGPG-----PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTR 150 (302)
T ss_dssp T---TCCEEECCGGGGTTCHH-----HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHH
T ss_pred c---ccccccccchhhhcChh-----HHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccc
Confidence 2 23477999999974321 011111111111100 01112357778888865 45544421
Q ss_pred ----C---C--CCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHH-cCccEEEeccc
Q 011679 286 ----P---F--VKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDVVFAGHV 355 (479)
Q Consensus 286 ----~---~--~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~ 355 (479)
+ . ....+..++..+.|++ ...+-+|++.|..... -..+.++ .+||++++||.
T Consensus 151 ~~~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~~---------------d~~la~~~~giD~ii~gh~ 212 (302)
T d2z1aa2 151 EISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE---------------DLKLARRLVGVQVIVGGHS 212 (302)
T ss_dssp HHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH---------------HHHHHTTCSSCCEEEECSS
T ss_pred ccccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcch---------------hhHHHhcCCCeeeeecCcc
Confidence 0 0 1123344455555554 4567799999986420 0223333 37999999999
Q ss_pred ccceee
Q 011679 356 HAYERS 361 (479)
Q Consensus 356 H~y~r~ 361 (479)
|..-..
T Consensus 213 h~~~~~ 218 (302)
T d2z1aa2 213 HTLLGS 218 (302)
T ss_dssp CCCBSC
T ss_pred ceeecc
Confidence 985433
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.55 E-value=0.00014 Score=54.91 Aligned_cols=78 Identities=18% Similarity=0.352 Sum_probs=47.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC-CCCCEEEEe----ecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE-PGPSTVSYG----TSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~-~~~~~v~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.|..+++...+ .+++.|+|.-... .....++|. ...+. ... . . ....+.|+||+|+|.
T Consensus 5 ~p~~L~~~~~~--~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~--~~~-----~------~--~~t~~~i~~L~p~t~ 67 (94)
T d1x5aa1 5 SGLSLKLVKKE--PRQLELTWAGSRPRNPGGNLSYELHVLNQDEE--WHQ-----M------V--LEPRVLLTKLQPDTT 67 (94)
T ss_dssp CSCCCCEEEEE--TTEEEEECCCCCSSCCSSCCEEEEEEECSSCE--EEE-----E------E--SSSEEEEESCCSSCE
T ss_pred CCCceEEEEcC--CCEEEEEEecccCCCCCcEEEEEEEEecCCce--EEE-----e------e--ccCEEEECCCCCCCE
Confidence 45566666543 4899999976532 222333443 32221 000 0 0 012457899999999
Q ss_pred EEEEeC------CCCCceeEEEECCC
Q 011679 133 YYYKIG------SGDSSREFWFQTPP 152 (479)
Q Consensus 133 Y~Yrv~------~~~~s~~~~f~T~p 152 (479)
|.+||. .+.+|+...|+|.|
T Consensus 68 Y~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 68 YIVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 999994 34678999999986
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.53 E-value=0.00015 Score=54.49 Aligned_cols=70 Identities=21% Similarity=0.389 Sum_probs=45.5
Q ss_pred CCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC------C
Q 011679 71 GKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------G 140 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~------~ 140 (479)
.+++.|.|.-....+. -.|+|....+.......+. .....|+||+|++.|.+||.+ +
T Consensus 14 ~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~V~A~n~~G~s 80 (93)
T d1x4xa1 14 ATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGP-------------GLSYEIKGLSPATTYYCRVQALSVVGAG 80 (93)
T ss_dssp TTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEES-------------CSEEEEESCCSSCEEEEEEEEECSSCCC
T ss_pred CCeEEEEEEecccCCCeeEEEEEEEccCCCcceEeecCC-------------ccEEEEcccceeeEEEEEEEEEECCcCc
Confidence 4799999986543322 3566666555433322211 123467999999999999943 3
Q ss_pred CCceeEEEECCCC
Q 011679 141 DSSREFWFQTPPK 153 (479)
Q Consensus 141 ~~s~~~~f~T~p~ 153 (479)
.+|+...++|+|+
T Consensus 81 ~~S~~~~~~Tpps 93 (93)
T d1x4xa1 81 PFSEVVACVTPPS 93 (93)
T ss_dssp CBCCCEEEECCCC
T ss_pred CCCCcEEEEeCCC
Confidence 5688889999763
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.35 E-value=0.00029 Score=52.86 Aligned_cols=81 Identities=19% Similarity=0.270 Sum_probs=46.5
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCCCC-----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEPGP-----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~~~-----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
|..+.+..-+ .+++.|.|........ -.++|.............. .. .....|+||+|++.|
T Consensus 4 P~~~~v~~~~--~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~---------~~--~~~~~v~~L~p~t~Y 70 (96)
T d1x5xa1 4 PASPVLTKAG--ITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD---------GE--DLAYTVKNLRRSTKY 70 (96)
T ss_dssp CCCCEEEEEC--SSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE---------ES--CSEEEEESCCSSCEE
T ss_pred CCCCEEEEec--CCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeec---------CC--CCEEEECCCCCCCEE
Confidence 4444554333 4799999986533221 2344443333222211111 01 123567899999999
Q ss_pred EEEeCC------CCCceeEEEECCC
Q 011679 134 YYKIGS------GDSSREFWFQTPP 152 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p 152 (479)
.+||.+ +.+|....|+|.|
T Consensus 71 ~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 71 KFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 999953 2457788899976
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.26 E-value=0.00041 Score=52.52 Aligned_cols=70 Identities=19% Similarity=0.245 Sum_probs=44.2
Q ss_pred CCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC------
Q 011679 71 GKAVIISWVTPHEP-----GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------ 139 (479)
Q Consensus 71 ~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~------ 139 (479)
.+++.|+|.-.... ..-.|+|..........+. . .. ...+.|++|+|++.|.+||.+
T Consensus 16 ~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~------~----~~--~~~~~v~~L~p~t~Y~frV~A~N~~G~ 83 (97)
T d2crza1 16 AKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY------Q----GS--EVECTVSSLLPGKTYSFRLRAANKMGF 83 (97)
T ss_dssp SSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE------E----ES--CSEEEEESCCTTCEEEECCEEECSSCB
T ss_pred CCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEee------c----CC--ceEEEEcCCCCCEEEEEEEEEecCCeE
Confidence 47899999864322 1235666655443332211 0 11 123568999999999999943
Q ss_pred CCCceeEEEECCC
Q 011679 140 GDSSREFWFQTPP 152 (479)
Q Consensus 140 ~~~s~~~~f~T~p 152 (479)
+.+|+.-.++|+|
T Consensus 84 s~~S~~~~~~T~p 96 (97)
T d2crza1 84 GPFSEKCDITTAP 96 (97)
T ss_dssp CCCCCCEEEECCC
T ss_pred cCCcCCCeEEeCc
Confidence 3568888888876
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.24 E-value=0.00094 Score=49.59 Aligned_cols=81 Identities=16% Similarity=0.153 Sum_probs=52.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+..- ..+++.|+|.-.... ..-.|+|.............. .-...+.|+||+|+|.|.+|
T Consensus 4 aP~n~~~~~~--s~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~ 70 (92)
T d1qg3a1 4 APQNPNAKAA--GSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEMK 70 (92)
T ss_dssp CCEEEEEEEC--STTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEEE
T ss_pred cCCCCEEEEc--cCCEEEEEEEecCCCccceEEeeeeccccccEEEEec-----------CCccEEEECCCCCCcEEEEE
Confidence 4777776654 358999999876432 234677876655432221110 11234678999999999999
Q ss_pred eCC------CCCceeEEEECC
Q 011679 137 IGS------GDSSREFWFQTP 151 (479)
Q Consensus 137 v~~------~~~s~~~~f~T~ 151 (479)
|.+ +.+|....++|.
T Consensus 71 V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 71 VCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp EEEECSSCBCCCCCCEEEECC
T ss_pred EEEEeCCcCcCCCCCEEEEcC
Confidence 943 356777888874
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00052 Score=52.89 Aligned_cols=87 Identities=25% Similarity=0.447 Sum_probs=51.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+.......+++.|+|.-....... .|.|....+..... ...... ..-.....|+||+|++.|
T Consensus 14 pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~L~p~t~Y 85 (111)
T d1x5ka1 14 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD--WVIEPV------VGNRLTHQIQELTLDTPY 85 (111)
T ss_dssp CCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTT--SEEEEE------STTCSEEEECSCCSSSEE
T ss_pred CCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcce--eEEEEe------CCCeeEEEECCCCCCCEE
Confidence 366677665443457999999875433222 45565444322110 000111 111224568999999999
Q ss_pred EEEeCC------CCCceeEEEECCC
Q 011679 134 YYKIGS------GDSSREFWFQTPP 152 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~p 152 (479)
.+||.+ +.+|+...|+|+.
T Consensus 86 ~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 86 YFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp EEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEcCCCCcCCCCCEEEECCC
Confidence 999943 3578888998864
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.19 E-value=0.00056 Score=52.05 Aligned_cols=75 Identities=15% Similarity=0.231 Sum_probs=46.3
Q ss_pred CCcEEEEEEcCCCCC-C----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC------
Q 011679 71 GKAVIISWVTPHEPG-P----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------ 139 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~-~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~------ 139 (479)
.+++.|.|.-....+ . -.|+|....+........... .......+.|+||+|++.|.+||.+
T Consensus 15 ~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~L~p~t~Y~frV~A~N~~G~ 87 (101)
T d2haza1 15 SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK-------EASMEGIVTIVGLKPETTYAVRLAALNGKGL 87 (101)
T ss_dssp SSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHH-------HHHHHSEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred CCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeee-------cccceeEEEecCCCCCeEEEEEEEEEeCCcC
Confidence 468999999764332 2 246776655432221111100 0111224688999999999999953
Q ss_pred CCCceeEEEECCC
Q 011679 140 GDSSREFWFQTPP 152 (479)
Q Consensus 140 ~~~s~~~~f~T~p 152 (479)
+.+|+.-.|+|.|
T Consensus 88 g~~S~~~~~~T~P 100 (101)
T d2haza1 88 GEISAASEFKTQP 100 (101)
T ss_dssp CCCCCCEEEECCC
T ss_pred cCCCCceeEEeCC
Confidence 3578888999987
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.18 E-value=0.00059 Score=51.62 Aligned_cols=81 Identities=16% Similarity=0.331 Sum_probs=50.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+++... ..+++.|.|....... .-.|+|....+....... .. .......|+||+|++.|
T Consensus 6 ~p~~~~~~~~--s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~--~~---------~~~~~~~i~~L~p~t~Y 72 (98)
T d1x5la1 6 QVVVIRQERA--GQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST--LK---------AVTTRATVSGLKPGTRY 72 (98)
T ss_dssp CCCCEECSCB--CSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE--EE---------ESSSEEEECSCCTTCEE
T ss_pred CCCceEEEec--cCCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEE--ec---------CCceEEEECCCCCCCEE
Confidence 3555554433 3589999998764332 235777765543222111 00 11235678999999999
Q ss_pred EEEeCC------CCCceeEEEECC
Q 011679 134 YYKIGS------GDSSREFWFQTP 151 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~ 151 (479)
.+||.+ +.+|+...|+|.
T Consensus 73 ~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 73 VFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EECEEEEETTEECCCCCCEEEECC
T ss_pred EEEEEEEcCCCCcCCCCCEEEEcC
Confidence 999943 357888889884
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.16 E-value=0.001 Score=50.45 Aligned_cols=84 Identities=14% Similarity=0.198 Sum_probs=52.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC------CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP------STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
+|..+.+..-. .+++.|+|........ -.|+|....+..... .... .......+.|+||+|+|
T Consensus 5 pP~~l~v~~~~--~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~------~~~~~~~~~i~~L~p~t 73 (104)
T d2b5ib2 5 APISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGHTWEEA---PLLT------LKQKQEWICLETLTPDT 73 (104)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTS---CCEE------ECSCCCEEEECSCCTTC
T ss_pred CCCCcEEEEEe--CCEEEEEEccccccccccceeEEEEEEecccccceee---eEEe------cCCCcEEEEECCCCCCC
Confidence 48888877654 5799999987643211 245665544321110 0000 11123346789999999
Q ss_pred EEEEEeCC-------C---CCceeEEEECCC
Q 011679 132 KYYYKIGS-------G---DSSREFWFQTPP 152 (479)
Q Consensus 132 ~Y~Yrv~~-------~---~~s~~~~f~T~p 152 (479)
.|.+||.+ + .||+...|+|.|
T Consensus 74 ~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 74 QYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp EEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 99999853 1 457888999976
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.07 E-value=0.002 Score=49.45 Aligned_cols=83 Identities=18% Similarity=0.246 Sum_probs=51.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-C----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-G----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
+|..+.+.... .+++.|.|.-.... . .-.|+|....+........ ...-...+.|++|.|+++
T Consensus 13 ~P~~l~~~~~~--~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~L~p~t~ 80 (107)
T d1x5fa1 13 APRDVVASLVS--TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENT----------SHPGEMQVTIQNLMPATV 80 (107)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEEC----------SSTTCSEEEECSCCTTCE
T ss_pred CCCccEEEEec--CCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEEE----------eCCCccEEEecCCCCCCE
Confidence 57777776543 57999999864221 1 1256666554433322211 111234578999999999
Q ss_pred EEEEeCCC------CCceeEEEECCC
Q 011679 133 YYYKIGSG------DSSREFWFQTPP 152 (479)
Q Consensus 133 Y~Yrv~~~------~~s~~~~f~T~p 152 (479)
|.+||.+- ..|....++|.|
T Consensus 81 Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 81 YIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 99999542 346777888865
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.01 E-value=0.0025 Score=47.35 Aligned_cols=81 Identities=14% Similarity=0.295 Sum_probs=48.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
+|..+.+... ..+++.|.|.-..+.+. -.|+|....+...... . ...-..++.|+||+|++.|
T Consensus 3 ~P~~~~~~~~--~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~-----~------~~~~~~~~~i~~L~p~t~Y 69 (93)
T d2vkwa2 3 APKLEGQMGE--DGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI-----R------LPSGSDHVMLKSLDWNAEY 69 (93)
T ss_dssp CCEEEEEECT--TSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCE-----E------ECTTCCEEEECSCCTTCEE
T ss_pred CCccCEeEEc--CCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeee-----e------ccCCceEEEEeccccceEE
Confidence 3666555433 35899999998754433 3577776654322111 0 0112235678999999999
Q ss_pred EEEeCCC---C--CceeEEEECC
Q 011679 134 YYKIGSG---D--SSREFWFQTP 151 (479)
Q Consensus 134 ~Yrv~~~---~--~s~~~~f~T~ 151 (479)
.+||.+- + ......|+|.
T Consensus 70 ~~~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 70 EVYVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EEEEEEEETTEECCCEEEEEECC
T ss_pred EEEEEEEcCCCCcCCEeEEEEec
Confidence 9999542 1 1124678774
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.01 E-value=0.00033 Score=52.52 Aligned_cols=79 Identities=19% Similarity=0.315 Sum_probs=47.7
Q ss_pred eEEEEeecCCCCcEEEEEEcCCCCCCCE----EEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 61 QVHITQGDYDGKAVIISWVTPHEPGPST----VSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 61 ~v~l~~~~~~~~~~~v~W~t~~~~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
.+++.... .+++.|.|.-........ |+|.............. .....+.|+||+|++.|.+|
T Consensus 6 ~l~~~~~t--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~ 72 (95)
T d2djsa1 6 IMHQVSAT--MRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVYVVQ 72 (95)
T ss_dssp CCEEEEEC--SSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEEEEE
T ss_pred ccEEEeec--CCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeec-----------CCccEEEEeecCCccEEEEE
Confidence 45555433 579999998765443333 44444433222111100 01224678999999999999
Q ss_pred eCC------CCCceeEEEECCC
Q 011679 137 IGS------GDSSREFWFQTPP 152 (479)
Q Consensus 137 v~~------~~~s~~~~f~T~p 152 (479)
|.+ +.+|+...|+|.|
T Consensus 73 V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 73 VRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp EEEEESSCEEEECCCEEEECCC
T ss_pred EEEEcCCCCCCCCCCEEEEeCC
Confidence 954 2457888899976
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.88 E-value=0.0061 Score=44.74 Aligned_cols=72 Identities=15% Similarity=0.193 Sum_probs=46.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+..-. .+++.|.|.-.... ..-.|+|....+......... . ...-...+.|+||+|+|.|.+|
T Consensus 3 aP~~l~v~~~~--~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~--~------~~~~~~~~~i~~L~p~t~Y~~~ 72 (92)
T d1tdqa2 3 APKNLRVGSRT--ATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--K------GIGPTTKTTLTDLVPGTEYGVG 72 (92)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--C------CSSSEEEEEECSCCTTCEEEEE
T ss_pred cCcCCEEEEec--CCEEEEEEEecCCcccceEEEEEEcCCCcceeeEEE--e------cCCCeeEEEECCccCCCEEEEE
Confidence 47777776543 57999999876533 334678877654322211111 0 1223456789999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|..
T Consensus 73 V~a 75 (92)
T d1tdqa2 73 ISA 75 (92)
T ss_dssp EEE
T ss_pred EEE
Confidence 954
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.87 E-value=0.0043 Score=47.84 Aligned_cols=84 Identities=15% Similarity=0.245 Sum_probs=52.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----------CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----------STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL 127 (479)
+|..|.+...+ +++.|+|........ -.|+|............ .. ...-...+.+.+|
T Consensus 8 pP~nl~v~~~~---~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~L 75 (114)
T d2gysa2 8 EPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAI---LL------SNTSQATLGPEHL 75 (114)
T ss_dssp CCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEE---EE------ESSSEEEECTTTC
T ss_pred cCCCeEEEEeC---CEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEE---ee------ccCceEEEEeCCC
Confidence 58888876543 589999998642211 24666665543221111 00 1122346788999
Q ss_pred CCCCEEEEEeCC----C--------CCceeEEEECCCC
Q 011679 128 EYDTKYYYKIGS----G--------DSSREFWFQTPPK 153 (479)
Q Consensus 128 ~p~t~Y~Yrv~~----~--------~~s~~~~f~T~p~ 153 (479)
.|++.|..||.+ + .||+...|+|+|.
T Consensus 76 ~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 76 MPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp CTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred CCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 999999999943 1 4688899999764
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=96.85 E-value=0.0051 Score=45.15 Aligned_cols=66 Identities=17% Similarity=0.372 Sum_probs=40.4
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
.+|..+.+..-. .+++.|+|.-..+ ......|....+... . . . ... -...++||+|+++|.||
T Consensus 5 ~~P~~l~~~~~~--~~sv~lsW~~p~~-~~~i~~Y~i~~~~~~-~--~---~------~~~--t~~~~~~L~p~t~Y~~~ 67 (88)
T d1k85a_ 5 TAPTNLASTAQT--TSSITLSWTASTD-NVGVTGYDVYNGTAL-A--T---T------VTG--TTATISGLAADTSYTFT 67 (88)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSC-CSSEEEEEEEESSSE-E--E---E------ESS--SEEEECCCCSSCEEEEE
T ss_pred CCCCCcEEEEec--CCEEEEEEeCCCC-CCCEEEEEEEccceE-E--E---e------cCC--CEEEECCCCCCCEEEEE
Confidence 358877776543 4799999986543 234666654322110 1 0 0 011 13568999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|.+
T Consensus 68 V~A 70 (88)
T d1k85a_ 68 VKA 70 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 953
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.82 E-value=0.0011 Score=51.16 Aligned_cols=71 Identities=13% Similarity=0.294 Sum_probs=39.1
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCCCCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
|..+.+.......+++.|.|....+.+.. .|+|....+... ..... ...-...+.|+||+|++.|.
T Consensus 14 P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~-~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 83 (108)
T d1wf5a1 14 PEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWT-VLLAS---------VDPKATSVTVKGLVPARSYQ 83 (108)
T ss_dssp CSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCE-EEESS---------CCTTCCEEEEESCCTTCEEE
T ss_pred CCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCce-EEeee---------ecCCccEEEECCCCCCCEEE
Confidence 44333333333457899999876443333 345554433211 11110 11122346789999999999
Q ss_pred EEeCC
Q 011679 135 YKIGS 139 (479)
Q Consensus 135 Yrv~~ 139 (479)
+||.+
T Consensus 84 frV~A 88 (108)
T d1wf5a1 84 FRLCA 88 (108)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0026 Score=47.51 Aligned_cols=84 Identities=18% Similarity=0.260 Sum_probs=50.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
+|.++.++......+++.|+|...... ..-.|+|....+...... ... .+-...+.|+||+||+.|..
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~----~~v------~~~~~~~~l~gL~P~t~Y~v 71 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE----ATI------PGHLNSYTIKGLKPGVVYEG 71 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEE----EEE------CSSCCEEEECSCCSSEEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceeee----ecc------CCCccEEEECCcccCcEEEE
Confidence 366777765544458999999976421 224678876554322110 111 12234568999999999999
Q ss_pred EeCC---CCCc--eeEEEECC
Q 011679 136 KIGS---GDSS--REFWFQTP 151 (479)
Q Consensus 136 rv~~---~~~s--~~~~f~T~ 151 (479)
++.. .+.| ....|+|.
T Consensus 72 ~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 72 QLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp EEEEEESSSCEEEEEEEEEEC
T ss_pred EEEEEeCCCccCcEEEEEEec
Confidence 9853 2233 35566663
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0023 Score=48.60 Aligned_cols=79 Identities=16% Similarity=0.301 Sum_probs=47.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+..-. .+++.|+|........ -.|+|............. .. ..+.|+||+|+|.|
T Consensus 13 ~P~~l~v~~~s--~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~~--~~~~i~~L~p~t~Y 77 (103)
T d1x5ga1 13 PAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-----------SS--HSYTINGLKKYTEY 77 (103)
T ss_dssp CCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-----------CS--SEEEECSCCTTCEE
T ss_pred cCCCcEEEEcc--CCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEec-----------cc--cEEecCCCCCCCEE
Confidence 35566665443 4799999986543221 246776655433222111 11 13568999999999
Q ss_pred EEEeCC------CCCceeEEEECC
Q 011679 134 YYKIGS------GDSSREFWFQTP 151 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~ 151 (479)
.+||.+ +.+|+...++|.
T Consensus 78 ~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 78 SFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEEEEECSSCCCCBCCCCCEECC
T ss_pred EEEEEEEcCCcCcCCCCCEEEEcC
Confidence 999843 245666777775
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.66 E-value=0.0014 Score=49.65 Aligned_cols=81 Identities=17% Similarity=0.382 Sum_probs=48.0
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
.|..+.+... ..+++.|+|.-.... ..-.|+|............ . ... ....|+||+|++.|.+
T Consensus 13 ~P~~~~~~~~--~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~----~------~~~--~~~~i~~L~p~t~Y~~ 78 (102)
T d1x5za1 13 QPLNFKAEPE--SETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----I------EPG--TSYRLQGLKPNSLYYF 78 (102)
T ss_dssp CCEEEEEECS--SSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----E------CSS--SEEEEECCCTTCEEEE
T ss_pred CCCCeEEEEc--cCCEEEEEEECCCCCCccceEEEEEeCCCCceEEEE----c------CCc--CEEEECCCCCCCEEEE
Confidence 4777777643 357999999875321 1235666554432211110 0 011 1346899999999999
Q ss_pred EeCC------CCCceeEEEECCC
Q 011679 136 KIGS------GDSSREFWFQTPP 152 (479)
Q Consensus 136 rv~~------~~~s~~~~f~T~p 152 (479)
||.+ +.+|....++|+.
T Consensus 79 ~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 79 RLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp CEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEcCCCEeCCCCCEEEEcCC
Confidence 9853 1356677788853
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.65 E-value=0.013 Score=43.92 Aligned_cols=81 Identities=16% Similarity=0.091 Sum_probs=46.6
Q ss_pred CCceEEEEe--ecCCCCcEEEEEEcCCCC----CCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCC
Q 011679 58 SPQQVHITQ--GDYDGKAVIISWVTPHEP----GPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (479)
Q Consensus 58 ~P~~v~l~~--~~~~~~~~~v~W~t~~~~----~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL 127 (479)
.|..+.+.. .....+++.|+|...... +.. .|+|............. .....+.|.||
T Consensus 5 pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~------------~~~~~~~i~~L 72 (103)
T d1f6fb2 5 PPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFT------------GHQTQFKVFDL 72 (103)
T ss_dssp CCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEE------------ETCSEEEECCC
T ss_pred CCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeecc------------cceeEEEeCCC
Confidence 366655532 233457899999976321 112 45555555443322211 11225788999
Q ss_pred CCCCEEEEEeCC----C---CCceeEEEEC
Q 011679 128 EYDTKYYYKIGS----G---DSSREFWFQT 150 (479)
Q Consensus 128 ~p~t~Y~Yrv~~----~---~~s~~~~f~T 150 (479)
.|++.|.+||.+ | .||+.-.++|
T Consensus 73 ~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~ 102 (103)
T d1f6fb2 73 YPGQKYLVQTRCKPDHGYWSRWSQESSVEM 102 (103)
T ss_dssp CTTCEEEEEEEEEESSSCCCCCCCCEEEEC
T ss_pred CcceEEEEEEEEEeCCCCCCCCcCceeeEC
Confidence 999999999954 2 4566666665
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.63 E-value=0.0079 Score=45.07 Aligned_cols=84 Identities=13% Similarity=0.152 Sum_probs=50.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC------CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
+|..+++... ..+++.|.|....... .-.|+|....+.......-... ..-.....|++|+|++
T Consensus 4 ~P~~~~~~~~--s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~--------~~~~~~~~i~~L~p~t 73 (101)
T d1x4ya1 4 GPYITFTDAV--NETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMV--------EGDRYWHSISHLQPET 73 (101)
T ss_dssp CCEEEEEECS--SSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEE--------ETTCCEEEECSCCTTC
T ss_pred CCcccEEEEE--cCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEE--------cCCeeEEEEcCCCCCC
Confidence 4777766654 3589999998642111 1247776655432211111110 1112234689999999
Q ss_pred EEEEEeCC------CCCceeEEEECC
Q 011679 132 KYYYKIGS------GDSSREFWFQTP 151 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~ 151 (479)
.|.+|+.+ +.+|+...++|.
T Consensus 74 ~Y~~~v~a~n~~G~s~~S~~~~~~T~ 99 (101)
T d1x4ya1 74 SYDIKMQCFNEGGESEFSNVMICETK 99 (101)
T ss_dssp EEEEEEEEECTTCCCCCCCCEEEECC
T ss_pred EEEEEEEEEcCCCCCCCCCcEEEEcc
Confidence 99999843 467888888885
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.61 E-value=0.012 Score=44.20 Aligned_cols=82 Identities=16% Similarity=0.140 Sum_probs=44.1
Q ss_pred CCceEEEEe--ecCCCCcEEEEEEcCCCC----CCCEE----EEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCC
Q 011679 58 SPQQVHITQ--GDYDGKAVIISWVTPHEP----GPSTV----SYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (479)
Q Consensus 58 ~P~~v~l~~--~~~~~~~~~v~W~t~~~~----~~~~v----~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL 127 (479)
.|..+.+.. .+...+++.|+|...... ....+ +|....+....... ......+.|.||
T Consensus 5 pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~------------~~~~~~~~i~~L 72 (104)
T d3d48r2 5 PPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKILSL 72 (104)
T ss_dssp CCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEE------------EETCSEEEECC-
T ss_pred CCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeec------------cccccEEEECCC
Confidence 366665542 233457899999976321 12234 44444332221111 011234678999
Q ss_pred CCCCEEEEEeCC-------CCCceeEEEECC
Q 011679 128 EYDTKYYYKIGS-------GDSSREFWFQTP 151 (479)
Q Consensus 128 ~p~t~Y~Yrv~~-------~~~s~~~~f~T~ 151 (479)
+|+|.|.+||.+ +.||+...++|+
T Consensus 73 ~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 73 HPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp -CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 999999999953 256888888874
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.58 E-value=0.00091 Score=58.60 Aligned_cols=64 Identities=22% Similarity=0.251 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHH-hCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 161 KFGIIGDLGQTYNSLS-TLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~-~l~~i~~-~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
|+.++||+|....... .++.+.. ...|.++++||++...... .+.++-+ ...-+.++.||||..
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~s-----------~~vl~~l-~~~~~~~i~GNHE~~ 79 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAEN-----------VECLELI-TFPWFRAVRGNHEQM 79 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCH-----------HHHHGGG-GSTTEEECCCHHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccccCccH-----------HHHHHHh-hccccccccCcHHHH
Confidence 7899999997754332 2333322 2568999999999753321 1223322 334588999999975
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.0034 Score=47.05 Aligned_cols=81 Identities=20% Similarity=0.155 Sum_probs=46.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC--------CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG--------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p 129 (479)
.|..+.+..- ..+++.|+|.....+. .-.|+|............ .. .. ...+.|+||+|
T Consensus 4 pP~~v~~~~~--s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----~~----~~--~~~~~i~~L~p 70 (100)
T d1x5ja1 4 PPVGVQASIL--SHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----AN----AT--TLSYLVTGLKP 70 (100)
T ss_dssp CCEEEEEEEE--ETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEE-----CC----BC--SSEEEEESCCT
T ss_pred CCcCeEEEEe--cCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEe-----cC----CC--ccEEEECCCCC
Confidence 3777776644 3589999998642111 124555554433221111 00 11 12356899999
Q ss_pred CCEEEEEeCC------CCCceeEEEECC
Q 011679 130 DTKYYYKIGS------GDSSREFWFQTP 151 (479)
Q Consensus 130 ~t~Y~Yrv~~------~~~s~~~~f~T~ 151 (479)
+|.|.+||.. +.+|....++|.
T Consensus 71 ~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 71 NTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp TCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred CCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 9999999843 345666666663
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.56 E-value=0.011 Score=44.56 Aligned_cols=83 Identities=19% Similarity=0.303 Sum_probs=48.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-CC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-PS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
+|..+.+..... .+.+.|.|....... .. .|+|....+..... .... ..-...+.|.+|+|+|.
T Consensus 7 PP~nl~v~~~~~-~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~----~~~~------~~~~t~~~i~~L~p~t~ 75 (105)
T d1erna2 7 APVGLVARLADE-SGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQ----RVEI------LEGRTECVLSNLRGRTR 75 (105)
T ss_dssp CCEEEEEEECCC--CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEE----EEEE------CTTCCEEEECSCCSSCE
T ss_pred CCCCCEEEEecC-CCcEEEEeeeccccccceEEEEEEEEecCCCCCceE----EEee------cCCccEEEEeCCCCCcE
Confidence 377777776543 467999998763221 22 56666554322111 1110 01112467899999999
Q ss_pred EEEEeCC--------C---CCceeEEEECC
Q 011679 133 YYYKIGS--------G---DSSREFWFQTP 151 (479)
Q Consensus 133 Y~Yrv~~--------~---~~s~~~~f~T~ 151 (479)
|.+||.+ | +||+...++|+
T Consensus 76 Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 76 YTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp EEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 9999954 1 46777777774
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.52 E-value=0.0084 Score=43.81 Aligned_cols=68 Identities=18% Similarity=0.214 Sum_probs=43.7
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEe
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKI 137 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv 137 (479)
|..+.+..- ..+++.|+|.-...+ ..-.|+|....+....... .. .-...+.|+||.|+|.|.++|
T Consensus 4 P~~l~v~~v--~~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V 70 (88)
T d1qr4a2 4 PKGISFSDI--TENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----VD------GSKTRTKLVKLVPGVDYNVNI 70 (88)
T ss_dssp CSCEEEESC--CSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----EE------TTCCEEEECSCCSSCEEEEEE
T ss_pred CcceEEEEe--cCCEEEEEEEcccEeeceEEEEEEeccCCceEEEE-----ec------CCccEEEECCCCCCCEEEEEE
Confidence 666666543 358999999866433 2346788776654332221 11 112356889999999999998
Q ss_pred CC
Q 011679 138 GS 139 (479)
Q Consensus 138 ~~ 139 (479)
..
T Consensus 71 ~a 72 (88)
T d1qr4a2 71 IS 72 (88)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.50 E-value=0.051 Score=47.35 Aligned_cols=190 Identities=17% Similarity=0.171 Sum_probs=101.8
Q ss_pred eEEEEEecCCCCCCcH---HHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNSL---STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~~---~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
||++++||.=...... ..+..+. .+.||||..|.++-. |.... .+.+.++++ ..+- ..+.|||=++
T Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk-~~~DfVIaNgENaa~-G~Git-----~k~~~~L~~---~GVD-vIT~GNH~wd 69 (252)
T d2z06a1 1 MRVLFIGDVMAEPGLRAVGLHLPDIR-DRYDLVIANGENAAR-GKGLD-----RRSYRLLRE---AGVD-LVSLGNHAWD 69 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHG-GGCSEEEEECTTTTT-TSSCC-----HHHHHHHHH---HTCC-EEECCTTTTS
T ss_pred CeEEEEeccCCHHHHHHHHHHhHHHH-hhCCEEEEeeeccCC-CcCCC-----HHHHHHHHH---hCCC-EEEcCccccc
Confidence 6899999985443221 2233333 368999999999864 33221 123333332 2333 4589999885
Q ss_pred cccCCCccccccccccccccCcCCC-CCCCCcEEEEEeCCEEEEEEcCCCC--CCCChHHHHHHHHHHhhccCCCCCeEE
Q 011679 237 YMTYMGEVVPFKSYLHRYPTPHLAS-KSSSPLWYAIRRASAHIIVLSSYSP--FVKYTPQWEWLREELKKVDREKTPWLI 313 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~yysf~~g~~~fi~Ldt~~~--~~~~~~Q~~WL~~~L~~~~~~~~~w~I 313 (479)
.. +...|-.. .+.--|.+.+ ...+..|+.++.++..+.+++-... ....+.-++-+++.|.+ .+.+.+|
T Consensus 70 kk----ei~~~i~~-~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~---~~~~~i~ 141 (252)
T d2z06a1 70 HK----EVYALLES-EPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEE---EKADYVL 141 (252)
T ss_dssp CT----THHHHHHH-SSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHH---CCCSEEE
T ss_pred ch----hhhhhhcc-ccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhh---cCccEEE
Confidence 31 11111111 1122233322 2233457888888877777764221 11112223334444444 4566788
Q ss_pred EEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEE-eCC
Q 011679 314 VLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYIT-VGD 392 (479)
Q Consensus 314 v~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~-~G~ 392 (479)
|=+|.= ......++ -.+-.-+|.+|+-=|+|.-.--.++ -++|+.|++ .|.
T Consensus 142 VDfHaE-----------aTSEK~A~-g~~ldGrvsavvGTHTHV~TaD~rI----------------Lp~GTayiTDvGM 193 (252)
T d2z06a1 142 VEVHAE-----------ATSEKMAL-AHYLDGRASAVLGTHTHVPTLDATR----------------LPKGTLYQTDVGM 193 (252)
T ss_dssp EEEECS-----------CHHHHHHH-HHHHBTTBSEEEEESSCSCBSCCEE----------------CTTSCEEESCCCC
T ss_pred EEcccc-----------hhhhheee-eEecCCCEEEEEecCccccccccEE----------------ecCCeEEEccCcc
Confidence 888852 22222222 3444678999999999985332222 247788887 565
Q ss_pred CCCC
Q 011679 393 GGNQ 396 (479)
Q Consensus 393 gG~~ 396 (479)
-|..
T Consensus 194 ~G~~ 197 (252)
T d2z06a1 194 TGTY 197 (252)
T ss_dssp BEES
T ss_pred ccch
Confidence 5554
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.50 E-value=0.0096 Score=44.93 Aligned_cols=71 Identities=14% Similarity=0.243 Sum_probs=43.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCC--CCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHE--PGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
+|..+.+..-....+.+.|+|.-... ... -.|+|............ .........|.+|+|++
T Consensus 4 pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t 72 (104)
T d1n26a3 4 PPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-----------VKDLQHHCVIHDAWSGL 72 (104)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-----------CGGGCSEEEESSCCTTC
T ss_pred CCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeec-----------cccceEEEEECCCCCCC
Confidence 47777776544345789999997532 122 24666655543322211 01123356789999999
Q ss_pred EEEEEeCC
Q 011679 132 KYYYKIGS 139 (479)
Q Consensus 132 ~Y~Yrv~~ 139 (479)
.|.+||.+
T Consensus 73 ~Y~~rVra 80 (104)
T d1n26a3 73 RHVVQLRA 80 (104)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999954
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.50 E-value=0.0043 Score=47.24 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=50.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC------CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP------STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
+|..+.+... ..+++.|.|.-...... -.|+|............. ... .......++.|++|+|+|
T Consensus 11 pP~~v~v~~~--~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~i~~L~p~t 82 (109)
T d1va9a1 11 PPMDVTLQPV--TSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSI--VEM----KATGDSEVYTLDNLKKFA 82 (109)
T ss_dssp CCEEEEEEEC--SSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBC--CBC----CCCSSEEEEEEESCCSSC
T ss_pred CCcCcEEEEe--cCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeee--eEE----ecCCCeeEEEECCCCcce
Confidence 4777777654 35899999997532211 256676554432211000 000 012234567889999999
Q ss_pred EEEEEeCC------CCCceeEEEECC
Q 011679 132 KYYYKIGS------GDSSREFWFQTP 151 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~ 151 (479)
.|.+||.. +.+|..-.++|+
T Consensus 83 ~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 83 QYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp CEEEEEEEEETTEECCCCCCEECCCC
T ss_pred EEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 99999953 345666666663
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.0058 Score=46.37 Aligned_cols=81 Identities=14% Similarity=0.237 Sum_probs=48.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCCEEEEe----ecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYG----TSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+.... .+++.|+|.-..........|- ............. . ......+.+|+|++.|
T Consensus 13 ~P~~~~~~~~~--~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~~---------~--~~~~~~~~~L~p~t~Y 79 (105)
T d1x3da1 13 IPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYM---------G--SQKQFKITKLSPAMGC 79 (105)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEE---------E--SCSEEEEESCCTTCEE
T ss_pred CCCCCEEEEcc--CCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEec---------C--CccEEEecCCcCCcEE
Confidence 46666666543 4799999987654444444443 2222221111111 1 1124567899999999
Q ss_pred EEEeCC------CCCceeEEEECC
Q 011679 134 YYKIGS------GDSSREFWFQTP 151 (479)
Q Consensus 134 ~Yrv~~------~~~s~~~~f~T~ 151 (479)
.+||.+ +.+|+...|+|.
T Consensus 80 ~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 80 KFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EEECCEEESSCBCCCCCCEEEECS
T ss_pred EEEEEEECCCeEcCCCCcEEEECC
Confidence 999953 356778888874
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.49 E-value=0.013 Score=45.72 Aligned_cols=95 Identities=15% Similarity=0.220 Sum_probs=52.6
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEE--eEEEEEeeecc---eeceEEEEEeCCC
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAE--GTVNNYTFYKY---KSGYIHQCLVDGL 127 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~v~l~gL 127 (479)
.+|..|.+..+ .+++.|+|.-..... .-.|+|............ .....+...+. ...-.....|.+|
T Consensus 9 ~aP~~v~v~~~---~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L 85 (123)
T d1wfta_ 9 GAPSTVRISKN---VDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDY 85 (123)
T ss_dssp CCCEEEEEEEC---SSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBC
T ss_pred cCCcccEEEeC---CCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcCC
Confidence 45888877652 368999999654332 236777765543211100 00000000000 0000112357899
Q ss_pred CCCCEEEEEeCC------CCCceeEEEECCCCC
Q 011679 128 EYDTKYYYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 128 ~p~t~Y~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
+|++.|.+||.+ +..|++..|+|.+..
T Consensus 86 ~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~ 118 (123)
T d1wfta_ 86 TSRPAIVFRISAKNEKGYGPATQIRWLQGNSKS 118 (123)
T ss_dssp SSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCS
T ss_pred CCCCEEEEEEEEecCCcCCCCCCcEEEEecCCC
Confidence 999999999953 356788888886543
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.0099 Score=44.97 Aligned_cols=71 Identities=18% Similarity=0.133 Sum_probs=44.1
Q ss_pred CCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC------C
Q 011679 71 GKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------G 140 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~------~ 140 (479)
.+++.|.|.-...... -.|+|....+......... ...-.....|+||+|+|.|.+||.+ |
T Consensus 20 ~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~frVra~n~~g~G 90 (105)
T d2d9qb2 20 AGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP---------LPLEALQYELCGLLPATAYTLQIRCIRWPLPG 90 (105)
T ss_dssp CSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE---------ECSCEEEEEECSCCSCCCEEEEEEEEECSSCC
T ss_pred CCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeec---------ccCCcceeEEecccCCeEEEEEEEEEeCCCCC
Confidence 4789999986533322 3567776554322221111 1123445688999999999999943 2
Q ss_pred ---CCceeEEEEC
Q 011679 141 ---DSSREFWFQT 150 (479)
Q Consensus 141 ---~~s~~~~f~T 150 (479)
+||+...++|
T Consensus 91 ~~S~wS~~~~~~t 103 (105)
T d2d9qb2 91 HWSDWSPSLELRT 103 (105)
T ss_dssp CCCCCCCCEEECC
T ss_pred CCcCCCCCEEEeC
Confidence 4677777766
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.46 E-value=0.01 Score=45.04 Aligned_cols=70 Identities=13% Similarity=0.080 Sum_probs=43.6
Q ss_pred CCcEEEEEEcCCCCCCC----EEEEeecCCCC-ceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC------
Q 011679 71 GKAVIISWVTPHEPGPS----TVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------ 139 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~~~----~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~------ 139 (479)
.+++.|.|......... .|+|....+.. ...+. .. ..-....+|++|.|+|.|.+||.+
T Consensus 21 ~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~-~~---------~~~~~~~~l~~L~p~t~Y~frVra~~~~g~ 90 (106)
T d1cd9b2 21 PGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVF-HL---------PSSKDQFELCGLHQAPVYTLQMRCIRSSLP 90 (106)
T ss_dssp CSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEE-EE---------ESCEEEEEECCCCSCSCEEEEEEEEESSSC
T ss_pred CCEEEEEEcCcccCCccceEEEEEEeeccccccceeee-cc---------cCCceEEEEeccCCCeEEEEEEEEEeCCCC
Confidence 47899999866433332 67887654432 22221 11 112345678999999999999953
Q ss_pred C---CCceeEEEEC
Q 011679 140 G---DSSREFWFQT 150 (479)
Q Consensus 140 ~---~~s~~~~f~T 150 (479)
+ +||...+|+|
T Consensus 91 g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 91 GFWSPWSPGLQLRP 104 (106)
T ss_dssp CCCCCCCCCEEECC
T ss_pred CCCcCCCCCeEecC
Confidence 1 4566777765
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.43 E-value=0.0097 Score=44.51 Aligned_cols=72 Identities=15% Similarity=0.277 Sum_probs=38.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC-------CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP-------STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~-------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~ 130 (479)
+|..|.+... ..+++.|+|........ -.|+|....+....... .. . .......+.|.+|+|+
T Consensus 4 ~P~~l~v~~~--~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~-~~-~------~~~~~~~~~i~~L~p~ 73 (101)
T d1iarb2 4 APGNLTVHTN--VSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIY-NV-T------YLEPSLRIAASTLKSG 73 (101)
T ss_dssp CCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEE-EE-C------SSCCEEEECC-----C
T ss_pred cCCcCEEEEE--eCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeee-ee-c------cCccceEEEECCCCCC
Confidence 4777766543 35799999997643221 25777766554332211 10 0 1223456789999999
Q ss_pred CEEEEEeCC
Q 011679 131 TKYYYKIGS 139 (479)
Q Consensus 131 t~Y~Yrv~~ 139 (479)
|.|.+||.+
T Consensus 74 t~Y~~rVrA 82 (101)
T d1iarb2 74 ISYRARVRA 82 (101)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.42 E-value=0.014 Score=42.70 Aligned_cols=70 Identities=21% Similarity=0.329 Sum_probs=44.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+++..- ..+++.|.|.-...+ ..-.|+|....+....... .. ..-...+.|.||+|+|.|.++
T Consensus 4 ~P~~l~v~~~--s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~~~ 71 (90)
T d1tena_ 4 APSQIEVKDV--TDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTI----DL------TEDENQYSIGNLKPDTEYEVS 71 (90)
T ss_dssp CCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEE----EE------ETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCcEEEEe--cCCEEEEEEEeCceEeccEEEEEEEcCCCceeEEE----Ee------cCCcceeeEeeecCCCEEEEE
Confidence 4777777643 458999999876433 2346788766543221111 11 112335689999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|.+
T Consensus 72 V~a 74 (90)
T d1tena_ 72 LIS 74 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.36 E-value=0.012 Score=42.96 Aligned_cols=70 Identities=19% Similarity=0.206 Sum_probs=43.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+..-. .+++.|.|....... ...++|............ ... .-.-...|+||.|++.|.+|
T Consensus 2 pP~~l~~~~v~--~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~----~~~------~~~~~~~i~~L~p~t~Y~~~ 69 (90)
T d1fnha1 2 APTDLKFTQVT--PTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----NLA------PDSSSVVVSGLMVATKYEVS 69 (90)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSCSCCCEE----EEC------TTCCEEEECSCCTTCEEEEE
T ss_pred CCCCEEEEEec--CCEEEEEEEccceeccceEEEEEeeeCCCceEEE----EeC------CCCeEEEEecccCceEEEEE
Confidence 37777776543 589999998865432 345777665443221110 000 11124689999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|.+
T Consensus 70 V~a 72 (90)
T d1fnha1 70 VYA 72 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 954
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.36 E-value=0.017 Score=42.11 Aligned_cols=69 Identities=17% Similarity=0.252 Sum_probs=43.1
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
|..+++..- ..+++.|.|.-.... ..-.|+|....+...... ... ..-...+.|+||+|+|.|.++
T Consensus 4 P~~l~~~~~--~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~~ 71 (91)
T d1fnfa2 4 PTDLRFTNI--GPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAE----LSI------SPSDNAVVLTNLLPGTEYVVS 71 (91)
T ss_dssp CEEEEEESC--CSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEE----EEE------CTTCCEEEECSCCTTCEEEEE
T ss_pred CCceEEEEe--CCCEEEEEEEecCCCCcceeEEEEEECCCCccEEE----EEe------CCCceEEEEeceeCCCEEEEE
Confidence 777766643 358999999876422 223678876655432111 111 112234688999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|..
T Consensus 72 V~a 74 (91)
T d1fnfa2 72 VSS 74 (91)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.35 E-value=0.0086 Score=43.75 Aligned_cols=70 Identities=11% Similarity=0.153 Sum_probs=44.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+..- ..+++.|+|.-...+ ..-.|+|....+...... ... ..-...+.|+||+|++.|.+|
T Consensus 3 ~P~~l~v~~v--t~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~----~~v------~~~~~~~~i~~L~p~t~Y~~~ 70 (89)
T d1fnfa3 3 SPTGIDFSDI--TANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE----DRV------PHSRNSITLTNLTPGTEYVVS 70 (89)
T ss_dssp CCEEEEEESC--CSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEE----EEE------ETTCCEEEEESCCTTCEEEEE
T ss_pred cCcCCEEEEe--cCCEEEEEEEeCCCEEeeEEEEEEECCCCCceEE----EEE------CCCccEEEECCCcccCEEEEE
Confidence 3777766643 468999999876433 234688876655432211 111 112235678999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|.+
T Consensus 71 V~a 73 (89)
T d1fnfa3 71 IVA 73 (89)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.27 E-value=0.015 Score=43.56 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=49.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+++.. ...+++.|+|.-.... ..-.|+|....+..... ... .-...+.|+||+|+|.|.++
T Consensus 3 ~P~~l~~~~--~t~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~------~~~------~~~~~~~l~~L~p~t~Y~~~ 68 (102)
T d2cuha1 3 GPTQLRALN--LTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPLQA------ETP------GSAVDYPLHDLVLHTNYTAT 68 (102)
T ss_dssp SCEEEECCC--CSSSCEEEEEECCSSCCSEEEEEEECSSSCCEEE------EEE------TTCSEEEECSCCSSSEEEEE
T ss_pred CCCccEEEE--eCCCEEEEEEEeeeccceeeEEEEEeccccceee------eee------eeeeeEEEccEEeeEEEEEE
Confidence 466666653 3468999999876433 23467776544322111 111 11225678999999999999
Q ss_pred eCCC-----CCceeEEEECCCCC
Q 011679 137 IGSG-----DSSREFWFQTPPKI 154 (479)
Q Consensus 137 v~~~-----~~s~~~~f~T~p~~ 154 (479)
|.+- .......|+|.+.+
T Consensus 69 V~a~~~~~~s~~~~~~~~T~~~~ 91 (102)
T d2cuha1 69 VRGLRGPNLTSPASITFTTGLEA 91 (102)
T ss_dssp EEEEETTEECCCEEEEEESCCCC
T ss_pred EEEEeCCCCcCCEEEEEECCCCC
Confidence 9531 22235578887653
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.25 E-value=0.0068 Score=45.16 Aligned_cols=68 Identities=15% Similarity=0.271 Sum_probs=45.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
+|..+.+.... .+++.|+|...... ..-.|+|....+....... . . ....+.|.+|.|++.|.+
T Consensus 5 ~P~nl~v~~~~--~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-~---------~--~~~~~~~~~L~p~t~Y~f 70 (95)
T d2b5ic1 5 APENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-V---------D--YRHKFSLPSVDGQKRYTF 70 (95)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEE-E---------C--SSCEEEECSCCTTSCEEE
T ss_pred CCCCCEEEEEe--CCEEEEEECCCCCceeEEEEEEEEcCCCceeeEee-e---------c--ccceeEcCCCCCCCEEEE
Confidence 58888887543 47999999976432 1246788776654332211 1 1 123577899999999999
Q ss_pred EeCC
Q 011679 136 KIGS 139 (479)
Q Consensus 136 rv~~ 139 (479)
||.+
T Consensus 71 rVRa 74 (95)
T d2b5ic1 71 RVRS 74 (95)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.23 E-value=0.014 Score=44.33 Aligned_cols=69 Identities=17% Similarity=0.308 Sum_probs=35.9
Q ss_pred CCcEEEEEEcCCCCCCC----EEEEeecCCCC-ceEEEeEEEEEe-eecceeceEEEEEeCCCCCCCEEEEEeCC
Q 011679 71 GKAVIISWVTPHEPGPS----TVSYGTSADKF-DFTAEGTVNNYT-FYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~~~----~v~y~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~ 139 (479)
.+++.|+|.-..+.+.. .|+|....... ............ .......-....+|+||+|+|.|.+||.+
T Consensus 13 ~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A 87 (107)
T d2ic2a1 13 DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 87 (107)
T ss_dssp ---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred CCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEEEE
Confidence 57999999987554444 35555443322 222221111000 00112233456788999999999999964
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.21 E-value=0.0046 Score=47.27 Aligned_cols=82 Identities=17% Similarity=0.250 Sum_probs=48.3
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+... .+++.|.|.-..... .-.|+|....+... ..... ...-...+.|.||.|++.|
T Consensus 10 PP~~~~~~~t---~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~-~~~~~---------~~~~~~~~~i~~L~p~t~Y 76 (108)
T d1v5ja_ 10 PPRGLVAVRT---PRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWE-VLDPA---------VAGTETELLVPGLIKDVLY 76 (108)
T ss_dssp CCEEEEEEEC---SSSEEEEEECCSCCSSCCCBEEEEEEETTCCCE-EEEEE---------ECSSCCEEECCCCCTTSCE
T ss_pred cCCCeEEEEc---CCEEEEEEEecccCCCceeEEEEEeeeeeeeee-ecccc---------ccceeeeEEEEeccCCcEE
Confidence 4777765442 468999998653222 23677776544321 11111 1112345678999999999
Q ss_pred EEEeCCC------CCceeEEEECCC
Q 011679 134 YYKIGSG------DSSREFWFQTPP 152 (479)
Q Consensus 134 ~Yrv~~~------~~s~~~~f~T~p 152 (479)
.|||.+- ..|....++|..
T Consensus 77 ~~rV~A~n~~g~s~~S~~~~~~T~~ 101 (108)
T d1v5ja_ 77 EFRLVAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp ECCBEEEETTEEEEECSCCCCCCSS
T ss_pred EEEEEEEeCCCEeCCcCceEEECCC
Confidence 9999642 245555666644
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.21 E-value=0.0074 Score=46.43 Aligned_cols=87 Identities=17% Similarity=0.183 Sum_probs=50.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+...+...+++.|.|.-...... -.|+|....+........ .....-..++.|++|.|++.|
T Consensus 7 pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~--------~~~~~~~~~~~i~~L~~~t~Y 78 (115)
T d1bqua2 7 PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP--------EDTASTRSSFTVQDLKPFTEY 78 (115)
T ss_dssp CCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG--------GGGCSCCSEEEECSCCSSEEE
T ss_pred CCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeecccc--------ccccccccEEeeCCCccCcEE
Confidence 47777776544446889999986532222 356666555433211100 001122346778999999999
Q ss_pred EEEeCC----C-----CCceeEEEECCC
Q 011679 134 YYKIGS----G-----DSSREFWFQTPP 152 (479)
Q Consensus 134 ~Yrv~~----~-----~~s~~~~f~T~p 152 (479)
.+||.+ | .+|....++|..
T Consensus 79 ~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 79 VFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 999942 2 345677787754
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.19 E-value=0.019 Score=41.90 Aligned_cols=69 Identities=17% Similarity=0.262 Sum_probs=43.8
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
.|..+++..- ..+++.|.|.-...+ ..-.|+|....+...... .. ..-.....|+||+|||.|.++
T Consensus 4 pP~~l~v~~~--~~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~~ 70 (90)
T d1fnha2 4 PPRRARVTDA--TETTITISWRTKTETITGFQVDAVPANGQTPIQR-----TI------KPDVRSYTITGLQPGTDYKIY 70 (90)
T ss_dssp CCEEEEEEEE--CSSEEEEEEECCSSCCCCEEEEEEESSSSCCEEE-----EC------CTTCSEEEEESCCTTCEEEEE
T ss_pred cCCCCEEEEe--cCCEEEEEEECCCCCCceeEEEEEEccCCceEEE-----ec------CCCccEEEeCCCCCCcEEEEE
Confidence 3777777654 358999999865433 334677776554322211 10 111235578999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|..
T Consensus 71 V~a 73 (90)
T d1fnha2 71 LYT 73 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.16 E-value=0.009 Score=43.40 Aligned_cols=68 Identities=15% Similarity=0.243 Sum_probs=43.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+..- ..+++.|.|.-..... .-.|+|....+...... .. .-.-++.|+||.|||.|.++
T Consensus 3 ~P~nl~v~~~--~~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~------~~------~~~~~~~~~~L~p~t~Y~v~ 68 (86)
T d1tdqa3 3 SPRDLMVTAS--SETSISLIWTKASGPIDHYRITFTPSSGISSEVT------VP------RDRTSYTLTDLEPGAEYIIS 68 (86)
T ss_dssp CCEEEEEEEE--CSSCEEEEEECCCSCCSEEEEEEECSSSCCEEEE------EE------SSCSEEEECCCCTTCCEEEE
T ss_pred cCCCCEEEEe--cCCEEEEEEeCCCCCccceEEEEecccccceEEE------eC------CCccEEEECCCccccEEEEE
Confidence 3777777654 3589999998865432 34678876554322111 00 11225788999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|..
T Consensus 69 V~a 71 (86)
T d1tdqa3 69 ITA 71 (86)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.12 E-value=0.027 Score=40.71 Aligned_cols=68 Identities=13% Similarity=0.256 Sum_probs=42.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+++..- ..+++.|+|.-..... .-.|+|......... .... .-...+.|+||+|++.|.++
T Consensus 2 aP~~l~v~~~--t~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~~~------~~~~------~~~~~~~~~~L~p~t~Y~v~ 67 (87)
T d1qr4a1 2 NPKDLEVSDP--TETTLSLRWRRPVAKFDRYRLTYVSPSGKKNE------MEIP------VDSTSFILRGLDAGTEYTIS 67 (87)
T ss_dssp CCEEEEEESC--CSSEEEEEEECCSSCCSEEEEEEECTTCCEEE------EEEC------TTCSEEEEESCCSSCEEEEE
T ss_pred cCcCcEEEEe--cCCEEEEEEECCCCCcceeEEEeecCCcceeE------EeCC------CCcCEEEECCCCcCCEEEEE
Confidence 4777776643 3589999999765432 346777765432111 1111 12235678999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|.+
T Consensus 68 V~a 70 (87)
T d1qr4a1 68 LVA 70 (87)
T ss_dssp EEE
T ss_pred EEE
Confidence 853
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.11 E-value=0.011 Score=44.97 Aligned_cols=74 Identities=11% Similarity=-0.011 Sum_probs=42.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceE-EEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFT-AEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
+|..+.+..- ..+++.|.|.-..+.+. -.|+|.......... ....... .........|.||+|++.
T Consensus 13 ~P~~~~~~~~--~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~~L~p~t~ 84 (111)
T d1wisa1 13 PPTNLGISNI--GPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLS------NEPDARSMEVPDLNPFTC 84 (111)
T ss_dssp CCEEEEEESC--CSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEE------SCTTCSEEEECSCCTTSE
T ss_pred CCCCCEEEEc--CCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeee------cccceeEEEeCCCCCCCE
Confidence 4777766643 35799999986543322 256666544332211 1111111 112233467899999999
Q ss_pred EEEEeCC
Q 011679 133 YYYKIGS 139 (479)
Q Consensus 133 Y~Yrv~~ 139 (479)
|.+||.+
T Consensus 85 Y~frV~A 91 (111)
T d1wisa1 85 YSFRMRQ 91 (111)
T ss_dssp ECCCCEE
T ss_pred EEEEEEE
Confidence 9999854
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=96.08 E-value=0.013 Score=43.72 Aligned_cols=70 Identities=16% Similarity=0.193 Sum_probs=41.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
+|..+.+..+ .+++.|+|.-..+.+. -.|+|................. -.....+.+|+|++.|
T Consensus 8 ~P~~~~v~~~---~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~L~p~t~Y 75 (100)
T d1cfba1 8 APKLTGITCQ---ADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVP---------NTDSSFVVQMSPWANY 75 (100)
T ss_dssp CCEEEEEEEC---SSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEE---------TTCSEEEEECCSSEEE
T ss_pred cCcCcEEEEc---CCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeecC---------CceEEEEecCCCCCEE
Confidence 5777777653 3589999986543322 3677776554433222111111 1122456799999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
.+||.+
T Consensus 76 ~frV~A 81 (100)
T d1cfba1 76 TFRVIA 81 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.08 E-value=0.017 Score=42.58 Aligned_cols=70 Identities=19% Similarity=0.289 Sum_probs=41.4
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCCCC-----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEPGP-----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~~~-----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
|..+.+..- ..+++.|.|........ -.|+|....+........ . .........|+||+|+|.|
T Consensus 10 P~~~~v~~~--s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~---~------~~~~~~~~~i~~L~p~t~Y 78 (95)
T d2ibga1 10 PELLEIEEY--SETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT---I------EGAHARSFKIAPLETATMY 78 (95)
T ss_dssp CEECCCBCC--SSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE---E------ECTTCCEEEECSCCTTCEE
T ss_pred CcCeEEEEe--CCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeee---c------cCCceeEEEEeeccCCeEE
Confidence 555544432 35899999986532221 267887655433211110 0 1122345679999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
.+||.+
T Consensus 79 ~~~V~A 84 (95)
T d2ibga1 79 EFKLQS 84 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.05 E-value=0.0084 Score=46.84 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=45.8
Q ss_pred CCcEEEEEEcCCCCC---CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC------CC
Q 011679 71 GKAVIISWVTPHEPG---PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------GD 141 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~------~~ 141 (479)
.+++.|+|.-..... .-.|.|.......... .-..... .........|.||+|+|.|.+||.. +.
T Consensus 29 ~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~~-~~~~~~v-----~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~ 102 (120)
T d1ujta_ 29 PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATS-SWQNLDA-----KVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGM 102 (120)
T ss_dssp TTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTT-CCEEEEC-----CCTTCCEEEEESCCSSEEEEEEEEEESSSCCCC
T ss_pred CCeEEEEecCCCCCCcEEEEEEEeeecccCCCCc-ceEEEEe-----ccCceeEEEECCCCCCCEEEEEEEEEeCCcCcC
Confidence 589999998764222 2357776544321100 0000000 1112334568999999999999842 34
Q ss_pred CceeEEEECCCCC
Q 011679 142 SSREFWFQTPPKI 154 (479)
Q Consensus 142 ~s~~~~f~T~p~~ 154 (479)
.|+...++|++..
T Consensus 103 ~S~~~~~~T~e~~ 115 (120)
T d1ujta_ 103 DSESKTVRTTEES 115 (120)
T ss_dssp CCCCEEEEECSSC
T ss_pred CCCCEEEEeCCCC
Confidence 6788889998753
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=96.02 E-value=0.074 Score=47.14 Aligned_cols=173 Identities=17% Similarity=0.101 Sum_probs=93.0
Q ss_pred CCeEEEEEecCCCCCCc---HHHHHHHHHh-CCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCc
Q 011679 158 ASYKFGIIGDLGQTYNS---LSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (479)
Q Consensus 158 ~~~~f~~~gD~~~~~~~---~~~l~~i~~~-~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 233 (479)
..+|++++||.=...+. .+.+..+.+. ++||||..|.+... |.... .+.+.++++ ..+- +.+.|||
T Consensus 3 ~~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~-G~Git-----~k~~~eL~~---~GvD-vIT~GNH 72 (281)
T d1t71a_ 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH-GKGLS-----LKHYEFLKE---AGVN-YITMGNH 72 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT-TSSCC-----HHHHHHHHH---HTCC-EEECCTT
T ss_pred ccceEEEEEccCCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCC-CcCCC-----HHHHHHHHH---hCCc-EEEcCch
Confidence 47899999998544321 2234555555 99999999999864 33221 133333332 2333 4589999
Q ss_pred ccccccCCCccccccccccc----cccCcCCC-CCCCCcEEEEEeCCEEEEEEcCCCC-CC---CChHHHHHHHHHHhhc
Q 011679 234 EIEYMTYMGEVVPFKSYLHR----YPTPHLAS-KSSSPLWYAIRRASAHIIVLSSYSP-FV---KYTPQWEWLREELKKV 304 (479)
Q Consensus 234 D~~~~~~~~~~~~~~~~~~~----~~~p~~~~-~~~~~~yysf~~g~~~fi~Ldt~~~-~~---~~~~Q~~WL~~~L~~~ 304 (479)
=++... ...|-.-..+ .++|...+ ...+..|..++.++..+.+++--.. +. .......-+++.+..
T Consensus 73 ~wd~ke----i~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~- 147 (281)
T d1t71a_ 73 TWFQKL----DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK- 147 (281)
T ss_dssp TTCCGG----GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT-
T ss_pred hhhchh----hHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHHhhcc-
Confidence 875211 0000000111 12222111 1223457888887766666664221 11 112233444444443
Q ss_pred cCCCCCeEEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccce
Q 011679 305 DREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYE 359 (479)
Q Consensus 305 ~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 359 (479)
.+.+.+||=+|.= ......++ -.+-.-+|.+|+-=|+|.-.
T Consensus 148 --~~~d~i~VDfHaE-----------ATSEK~A~-g~~lDGrvsaVvGTHTHV~T 188 (281)
T d1t71a_ 148 --RDCDLHIVDFHAE-----------TTSEKNAF-CMAFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp --CCCSEEEEEEECS-----------CHHHHHHH-HHHHTTTSSEEEEESSSSCC
T ss_pred --cCCCeEEEEeccc-----------hhhhhhhh-eeeeCCcEEEEEecCccccc
Confidence 5567788888852 22222222 34446789999999999853
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.0069 Score=46.03 Aligned_cols=69 Identities=17% Similarity=0.252 Sum_probs=40.0
Q ss_pred CCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC------
Q 011679 71 GKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------ 139 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~------ 139 (479)
.+++.|.|......+ .-.|+|.............. . -.....++||+|++.|.+||.+
T Consensus 25 ~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~~---------~--~~~~~~i~~L~p~t~Y~~rV~A~n~~G~ 93 (107)
T d2crma1 25 SHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS---------G--ATREHLCDRLNPGCFYRLRVYCISDGGQ 93 (107)
T ss_dssp TTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC---------S--SCSEEEECSCCTTSCEEEEEEEEETTEE
T ss_pred CCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEeec---------C--CccEEEEeccCCCCEEEEEEEEECCCcC
Confidence 478999998653221 13556654443322211110 1 1123578999999999999954
Q ss_pred CCCceeEEEEC
Q 011679 140 GDSSREFWFQT 150 (479)
Q Consensus 140 ~~~s~~~~f~T 150 (479)
+.+|+...++|
T Consensus 94 s~~S~~v~v~T 104 (107)
T d2crma1 94 SAVSESLLVQT 104 (107)
T ss_dssp CCCCCCCCCCC
T ss_pred cCCCCcEEEEC
Confidence 24566555655
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.026 Score=42.72 Aligned_cols=81 Identities=12% Similarity=0.049 Sum_probs=47.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC---CC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP---GP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~---~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~ 130 (479)
.|..+.+..-....+++.|.|...... .. -.++|....+.....+.. . -...+.|.+|.|+
T Consensus 10 PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~----------~--~~~~~~i~~L~~~ 77 (109)
T d1uc6a_ 10 PPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL----------S--NGTAHTITDAYAG 77 (109)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE----------S--SCSEEEETTCCSS
T ss_pred CCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEecc----------C--CceeEEeCCCCCC
Confidence 377777764333457899999986321 11 245555544433222110 1 1224568999999
Q ss_pred CEEEEEeCCC--------CCceeEEEEC
Q 011679 131 TKYYYKIGSG--------DSSREFWFQT 150 (479)
Q Consensus 131 t~Y~Yrv~~~--------~~s~~~~f~T 150 (479)
|.|.+||.+. +||+....+|
T Consensus 78 t~Y~~rVrA~~~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 78 KEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp SCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred CEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence 9999999642 3566555544
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.03 Score=43.61 Aligned_cols=85 Identities=15% Similarity=0.177 Sum_probs=47.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCC----EEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+.... .+++.|.|.-....... .++|................ .......|.+|+|++.|
T Consensus 19 ~P~~~~v~~~~--~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~L~p~t~Y 87 (127)
T d1ueya_ 19 PPFDLELTDQL--DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV---------SGTQTTAQLNLSPYVNY 87 (127)
T ss_dssp CCEEEEEECCS--SSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEE---------ESSCCEEEECCCTTCEE
T ss_pred CCCCcEEEEec--CCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEeec---------CCceEEEECCCccCCEE
Confidence 47777776543 57999999866544333 34444333332221111111 11223557899999999
Q ss_pred EEEeCC------CCCce-eEEEECCCC
Q 011679 134 YYKIGS------GDSSR-EFWFQTPPK 153 (479)
Q Consensus 134 ~Yrv~~------~~~s~-~~~f~T~p~ 153 (479)
.+||.+ +.+|. ...++|.+.
T Consensus 88 ~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 88 SFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 999843 23343 345666654
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.016 Score=42.86 Aligned_cols=72 Identities=14% Similarity=0.250 Sum_probs=43.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
.|..+++..-.+ .+.+.|.|.-...+ ..-.|+|....+....... ... ..-...+.|+||+|||.|..
T Consensus 4 PP~~l~v~~~~~-ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~---~~~------~~~~~~~~i~~L~p~t~Y~v 73 (94)
T d1fnfa1 4 PPTNLHLEANPD-TGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLE---EVV------HADQSSCTFDNLSPGLEYNV 73 (94)
T ss_dssp CCEEEEEEECSS-SSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEE---EEE------CTTCCEEECCCCCTTSCEEE
T ss_pred cCcCcEEEEecC-CCEEEEEeeCCCCCCeeEEEEEEEEecccCceEEE---EEe------CCCccEEEECCCCCCCEEEE
Confidence 377887765432 35689999876432 2245778765543221111 111 11234578999999999999
Q ss_pred EeCC
Q 011679 136 KIGS 139 (479)
Q Consensus 136 rv~~ 139 (479)
+|.+
T Consensus 74 ~V~a 77 (94)
T d1fnfa1 74 SVYT 77 (94)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9854
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.00 E-value=0.018 Score=43.80 Aligned_cols=72 Identities=17% Similarity=0.304 Sum_probs=40.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
+|..+.+..- ..+++.|.|.-..+.+. -.|+|............... ...-...+.|+||+|++.|
T Consensus 13 ~P~~~~v~~~--~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~v~~L~p~t~Y 82 (108)
T d1x4za1 13 APDRPTISTA--SETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA--------IPPSRLSVEITGLEKGISY 82 (108)
T ss_dssp CCCCCEEEEC--CSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE--------ECTTCCEEEEESCCTTCEE
T ss_pred cCCCCEEEEc--cCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEEe--------ecCCccEEEECCCCCCCEE
Confidence 3555555532 35789999954332222 35677655443222111111 1112234678999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
.+||.+
T Consensus 83 ~frV~A 88 (108)
T d1x4za1 83 KFRVRA 88 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.98 E-value=0.0094 Score=44.62 Aligned_cols=70 Identities=14% Similarity=0.224 Sum_probs=42.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
+|..+.+.... .+++.|.|.-....+ .-.|+|....+..+..+.. ...-...+.|+||.|++.
T Consensus 4 ~P~~~~v~~~~--~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~----------~~~~~~~~~v~~L~~~~~ 71 (98)
T d1x5ya1 4 APQHLTVEDVT--DTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK----------EPVERCGFTVKDLPTGAR 71 (98)
T ss_dssp CCEEEEEEEEC--SSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS----------SCBSSSEEEEECCCTTCC
T ss_pred CCcCcEEEEcc--CCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeee----------ecCceeEEEECCCcCCeE
Confidence 47777666433 479999998653221 1367777665443322110 001112456899999999
Q ss_pred EEEEeCC
Q 011679 133 YYYKIGS 139 (479)
Q Consensus 133 Y~Yrv~~ 139 (479)
|.+||.+
T Consensus 72 Y~frV~A 78 (98)
T d1x5ya1 72 ILFRVVG 78 (98)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999965
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.79 E-value=0.0062 Score=46.39 Aligned_cols=81 Identities=16% Similarity=0.219 Sum_probs=46.6
Q ss_pred CceEEEEeecC----CCCcEEEEEEcCCCCC----C----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCC
Q 011679 59 PQQVHITQGDY----DGKAVIISWVTPHEPG----P----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (479)
Q Consensus 59 P~~v~l~~~~~----~~~~~~v~W~t~~~~~----~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~g 126 (479)
|..+.++.... ...++.|+|.-..... . -.|+|....+....+... . ....+.|++
T Consensus 4 P~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~~----------~--~~~~~~i~~ 71 (106)
T d1axib2 4 PIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP----------I--LTTSVPVYS 71 (106)
T ss_dssp CEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCC----------B--SSSEEEEEE
T ss_pred CCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeeee----------c--ccceEEECC
Confidence 55555543221 1347999998653211 1 256666655543322210 1 123577899
Q ss_pred CCCCCEEEEEeCC--------CCCceeEEEECC
Q 011679 127 LEYDTKYYYKIGS--------GDSSREFWFQTP 151 (479)
Q Consensus 127 L~p~t~Y~Yrv~~--------~~~s~~~~f~T~ 151 (479)
|+|++.|.+||.+ +.||+...++|+
T Consensus 72 L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 72 LKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp EETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 9999999999954 245666666553
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.77 E-value=0.0061 Score=47.63 Aligned_cols=88 Identities=17% Similarity=0.250 Sum_probs=49.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC--C----CCEEEEeecCCCCc---eEEEeEEEEEeeecceeceEEEEEeCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP--G----PSTVSYGTSADKFD---FTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~--~----~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~l~gL~ 128 (479)
+|..+.+..-. .+++.|.|...... . ...+.|........ .......... ..-..++.|.+|+
T Consensus 17 ~P~~v~v~~~~--~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~L~ 88 (125)
T d1uena_ 17 APGNVRVNVVN--STLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTF------QGSKTHGMLPGLE 88 (125)
T ss_dssp CCSSCEEEEEE--TTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEE------ESSCSEEEEESCC
T ss_pred CCcccEEEEec--CCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEe------CCCccEEEECCCC
Confidence 46777776543 47999999764211 1 11344443322111 1111111111 1123467889999
Q ss_pred CCCEEEEEeCC------CCCceeEEEECCCC
Q 011679 129 YDTKYYYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 129 p~t~Y~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
|+|.|.+||.+ +.+|....|+|.+.
T Consensus 89 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 89 PFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 99999999953 24677889999764
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.76 E-value=0.07 Score=38.83 Aligned_cols=81 Identities=16% Similarity=0.212 Sum_probs=47.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+.. ...+++.|+|...... ..-.|+|....+... . ... ......+.|+||+|+|.|.++
T Consensus 4 ~P~~l~~~~--~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~-~-----~~~------~~~~~~~~i~~L~p~t~Y~~~ 69 (93)
T d2cuma1 4 APRDLEAKE--VTPRTALLTWTEPPVRPAGYLLSFHTPGGQTQ-E-----ILL------PGGITSHQLLGLFPSTSYNAR 69 (93)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEECTTSCEE-E-----EEE------CSSCSEEEECSCCTTCEEEEE
T ss_pred cCCCCEEEE--eCCCEEEEEEEccccccccEEEEEEccccccE-E-----EEE------CCCccEEEEeCccCCCEEEEE
Confidence 366666553 3458999999876533 335677776443211 0 111 112234679999999999999
Q ss_pred eCCC---CCc--eeEEEECCC
Q 011679 137 IGSG---DSS--REFWFQTPP 152 (479)
Q Consensus 137 v~~~---~~s--~~~~f~T~p 152 (479)
|.+- +.| ....|+|.+
T Consensus 70 V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 70 LQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp EEEEBTTBCCCCEEEEEECCC
T ss_pred EEEEeCCCCCCCEEEEEEeCC
Confidence 8531 222 345676643
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.74 E-value=0.015 Score=44.87 Aligned_cols=82 Identities=13% Similarity=0.266 Sum_probs=46.0
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
+|..+.+..-. .+++.|.|.-...... -.|+|............ .... .-.....|+||+|+|.|
T Consensus 23 ~P~~~~~~~~~--~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~---~~~~------~~~~~~~i~~L~p~t~Y 91 (117)
T d1wfoa1 23 PPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV---EVLA------PSARQYTATGLKPESVY 91 (117)
T ss_dssp CCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE---EEEC------TTCCEEEEESCCSSSEE
T ss_pred CCCCcEEEEec--CCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeE---EecC------CceEEEEECCCCCCCEE
Confidence 46666665433 4799999976533222 25777655443221110 0100 11224568999999999
Q ss_pred EEEeCCC------CCceeEEEEC
Q 011679 134 YYKIGSG------DSSREFWFQT 150 (479)
Q Consensus 134 ~Yrv~~~------~~s~~~~f~T 150 (479)
.+||.+- .+|+...++|
T Consensus 92 ~~~V~A~n~~G~g~~S~~~~~tT 114 (117)
T d1wfoa1 92 LFRITAQTRKGWGEAAEALVVTT 114 (117)
T ss_dssp EEEEEEECSSCEEEEEEEEEECC
T ss_pred EEEEEEECCCcCCCCcCCEEEEC
Confidence 9999542 2455555554
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.73 E-value=0.035 Score=40.66 Aligned_cols=70 Identities=17% Similarity=0.281 Sum_probs=43.9
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+..-. .+++.|+|.-...+ ..-.|.|....+...... ... ..-...+.++||+|+++|..+
T Consensus 6 ~P~~l~v~~v~--~~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~v~ 73 (93)
T d1tdqa1 6 GPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTT----FRL------QPPLSQYSVQALRPGSRYEVS 73 (93)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSSCCCEE----EEE------CTTCSEEEECSCCTTCEEEEE
T ss_pred cCCCCEEEEeC--CCEEEEEEEccccCCCceEEEEEeccCcceeeE----EEe------CCCceEEEEeCcccceEEEEE
Confidence 47777776554 47899999865433 234677776654322111 111 111234678999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|..
T Consensus 74 V~a 76 (93)
T d1tdqa1 74 ISA 76 (93)
T ss_dssp EEE
T ss_pred EEE
Confidence 954
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=95.65 E-value=0.12 Score=44.99 Aligned_cols=191 Identities=17% Similarity=0.181 Sum_probs=102.8
Q ss_pred eEEEEEecCCCCCCc---HHHHHHHHHhCCCEEEEcCcccccCcccccccchhhhHHHHHHHhhhccCCeEEcCCCcccc
Q 011679 160 YKFGIIGDLGQTYNS---LSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 160 ~~f~~~gD~~~~~~~---~~~l~~i~~~~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNHD~~ 236 (479)
|||+++||.=..... .+.+..+. .+.||||..|.++-. |.... .+.+.++++ ..+- ..+.|||=++
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~lk-~~~DfVIaNgENaa~-G~Git-----~~~~~~l~~---~GvD-viT~GNH~wd 69 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTIR-PQFDFVIVNMENSAG-GFGMH-----RDAARGALE---AGAG-CLTLGNHAWH 69 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHG-GGCSEEEEECTBTTT-TSSCC-----HHHHHHHHH---HTCS-EEECCTTTTS
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHHH-hhCCEEEECCccCCC-CcCCC-----HHHHHHHHH---cCCc-EEEcCchhhc
Confidence 689999998544321 12233343 368999999999864 33221 133333333 2333 4589999875
Q ss_pred cccCCCcccccc-ccccccccCcCCC--CCCCCcEEEEEeCCEEEEEEcCCCC--CCCChHHHHHHHHHHhhccCCCCCe
Q 011679 237 YMTYMGEVVPFK-SYLHRYPTPHLAS--KSSSPLWYAIRRASAHIIVLSSYSP--FVKYTPQWEWLREELKKVDREKTPW 311 (479)
Q Consensus 237 ~~~~~~~~~~~~-~~~~~~~~p~~~~--~~~~~~yysf~~g~~~fi~Ldt~~~--~~~~~~Q~~WL~~~L~~~~~~~~~w 311 (479)
.. +...|- ....+.--|.+.+ ...+..|+.++..+..+.+++-... ......-++-+++.|++ .+.+.
T Consensus 70 kk----ei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~~---~~~~~ 142 (255)
T d1t70a_ 70 HK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLER---DDLGT 142 (255)
T ss_dssp ST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTC---SSCCE
T ss_pred ch----hHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHhh---cCCCe
Confidence 21 111110 0111122233321 2234567888887767777664221 11122234445566655 44567
Q ss_pred EEEEeccccccCCCCccCcCHHHHHHHHHHHHHcCccEEEecccccceeeeeccCCcccccCCcccccCCCCCCeEEE-e
Q 011679 312 LIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDVVFAGHVHAYERSYRISNLHYNISSGDCFPVPDKSAPVYIT-V 390 (479)
Q Consensus 312 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~~~i~-~ 390 (479)
+||=+|.= ......++ -.+-.-+|.+|+-=|+|...--.++ -++|+.|++ .
T Consensus 143 i~VDfHaE-----------aTSEK~A~-g~~ldGrvsav~GTHTHV~TaD~rI----------------lp~GTay~TDv 194 (255)
T d1t70a_ 143 VFVDFHAE-----------ATSEKEAM-GWHLAGRVAAVIGTHTHVPTADTRI----------------LKGGTAYQTDA 194 (255)
T ss_dssp EEEEEECS-----------CHHHHHHH-HHHHTTSSSEEEEESSCSCBSCCEE----------------ETTTEEEESCC
T ss_pred EEEEccch-----------hHHHHHHH-HhhhcCcEEEEEecCcccccccceE----------------ecCCcEEEecC
Confidence 88888852 22222222 3444678999999999985433222 146778887 5
Q ss_pred CCCCCC
Q 011679 391 GDGGNQ 396 (479)
Q Consensus 391 G~gG~~ 396 (479)
|.-|..
T Consensus 195 GMtG~~ 200 (255)
T d1t70a_ 195 GFTGPH 200 (255)
T ss_dssp CCBEES
T ss_pred ccccch
Confidence 555544
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.65 E-value=0.012 Score=45.63 Aligned_cols=70 Identities=16% Similarity=0.211 Sum_probs=38.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
+|..+.+..-. .+++.|.|.-..+... -.|+|............. .. .. .....|+||+|++.|
T Consensus 18 pP~~~~v~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~-----~~--~~~~~v~~L~p~t~Y 85 (117)
T d1uema_ 18 PPSKPQVTDVT--KNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA---NH-----VK--TTLYTVRGLRPNTIY 85 (117)
T ss_dssp CCCCCEEEEEC--SSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE---EE-----EC--SSEEEECSCCTTCEE
T ss_pred CCCCCEEEEcc--CCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEec---cc-----cc--cccceECCCCCCCEE
Confidence 35566665432 4789999974432222 345665444321111100 00 01 124568999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
.+||.+
T Consensus 86 ~frV~A 91 (117)
T d1uema_ 86 LFMVRA 91 (117)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.57 E-value=0.011 Score=44.13 Aligned_cols=76 Identities=13% Similarity=0.174 Sum_probs=42.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEE--EeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTA--EGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
.|..+++..- ..+++.|.|...... ....|+|........... ........ ..+-.....|.||+|++.|.
T Consensus 6 ~~~~l~v~~~--t~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~L~p~t~Y~ 79 (101)
T d2cuia1 6 RLSQLSVTDV--TTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM----VPGTRHSAVLRDLRSGTLYS 79 (101)
T ss_dssp CCCCCEEESC--CSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE----EETTCCEEEECSCCTTCEEE
T ss_pred CCCCcEEEEE--CCCEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEee----cccceeEEEeCCCCcCCEEE
Confidence 4666666643 357999999655322 234677776543221110 00000100 11223345779999999999
Q ss_pred EEeCC
Q 011679 135 YKIGS 139 (479)
Q Consensus 135 Yrv~~ 139 (479)
++|..
T Consensus 80 ~~V~a 84 (101)
T d2cuia1 80 LTLYG 84 (101)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99954
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.55 E-value=0.0099 Score=44.65 Aligned_cols=74 Identities=19% Similarity=0.266 Sum_probs=41.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEE-EeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTA-EGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
+|..+.+..-. .+++.|.|.-...... -.|+|........... ....... ..-...+.|+||+|++.
T Consensus 5 ~P~~~~~~~~~--~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~L~p~t~ 76 (103)
T d1qg3a2 5 EPGRLAFNVVS--STVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVD------NPKNRMLLIENLRESQP 76 (103)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEEC------CTTCCEEEECCCCTTCC
T ss_pred cCCCcEEEEec--CCEEEEEEEECccCCCCceEEEEEeeccccccccccceEEEEec------CCCceEEEEeecCCCCE
Confidence 36666665443 4799999986543322 2466655543321100 0011110 11123578899999999
Q ss_pred EEEEeCC
Q 011679 133 YYYKIGS 139 (479)
Q Consensus 133 Y~Yrv~~ 139 (479)
|.+||.+
T Consensus 77 Y~~~V~A 83 (103)
T d1qg3a2 77 YRYTVKA 83 (103)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.52 E-value=0.0095 Score=47.50 Aligned_cols=34 Identities=21% Similarity=0.197 Sum_probs=27.1
Q ss_pred EEEeCCCCCCCEEEEEeCC------CCCceeEEEECCCCC
Q 011679 121 QCLVDGLEYDTKYYYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 121 ~v~l~gL~p~t~Y~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
.+.|+||+|+|.|.+||.+ +.+|+...|+|++.+
T Consensus 83 ~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~~ 122 (137)
T d1wk0a_ 83 NITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp EEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred EEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCCC
Confidence 4679999999999999953 356788889997643
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.47 E-value=0.018 Score=41.82 Aligned_cols=70 Identities=14% Similarity=0.254 Sum_probs=43.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+..-. .+++.|+|.-.... ..-.|+|....+..... .-. ...-...+.|+||.|++.|.+|
T Consensus 3 aP~nl~v~~~~--~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~L~p~t~Y~~~ 70 (89)
T d1fnha3 3 APSNLRFLATT--PNSLLVSWQPPRARITGYIIKYEKPGSPPREV-VPR---------PRPGVTEATITGLEPGTEYTIY 70 (89)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEECTTSCCEEC-TTC---------CCTTCCEEEEESCCTTCEEEEE
T ss_pred cCcCCEEEEec--CCEEEEEEeCCCcCCceEEEEEeeccCCccEE-EEE---------cCCCccEEEEEeeeCCCEEEEE
Confidence 47777776543 47999999876433 23367777654421110 000 0111235678999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|.+
T Consensus 71 V~a 73 (89)
T d1fnha3 71 VIA 73 (89)
T ss_dssp EEE
T ss_pred EEE
Confidence 954
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.43 E-value=0.02 Score=44.23 Aligned_cols=84 Identities=21% Similarity=0.426 Sum_probs=48.7
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCC--CCCCCEEEE----eecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPH--EPGPSTVSY----GTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~--~~~~~~v~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..+.+.... .+++.|.|.-.. ........| ....+. ...... ....-.....|+||+|++
T Consensus 14 ~P~~v~~~~~~--~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~------~~~~~~----~~~~~~~~~~i~~L~p~t 81 (119)
T d1x5ha1 14 APQNLSLEVRN--SKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTET----LVSGTQLSQLIEGLDRGT 81 (119)
T ss_dssp CCEEEEEECCS--SSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEECC----BCCTTCCEEEEECCCSSC
T ss_pred CCcCeEEEEec--CcEEEEEEEcccccCCCCCEEEEEEEEeecccc------cceeee----ecCCCccEEEeCCCCCCC
Confidence 47777776543 479999998642 121123334 332210 000000 011223456789999999
Q ss_pred EEEEEeCC------CCCceeEEEECCCC
Q 011679 132 KYYYKIGS------GDSSREFWFQTPPK 153 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T~p~ 153 (479)
.|.+||.+ |.+|....|+|.+.
T Consensus 82 ~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 82 EYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 99999953 23677888999754
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.34 E-value=0.021 Score=42.09 Aligned_cols=69 Identities=9% Similarity=0.110 Sum_probs=40.6
Q ss_pred CceEEEEeecCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 59 PQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 59 P~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
|..+.+..- ..+++.|.|.-.... ..-.|+|....+...... .. ...-...+.|+||+|++.|.+|
T Consensus 9 P~~l~v~~~--t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~----~~------~~~~~t~~~i~~L~p~t~Y~~~ 76 (95)
T d2fnba_ 9 LTDLSFVDI--TDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFE----DF------VDSSVGYYTVTGLEPGIDYDIS 76 (95)
T ss_dssp CTTCEEECC--CSSCEEEECCCCCCSSCCEEEEEEEEETSCCEEEE----EE------CCSSCSEEEECCCCTTSEEEEE
T ss_pred CCCeEEEEE--cCCEEEEEEEecCCceEEeEEEEEEEeeccceEEE----EE------eCCCCeEEEEecccCCEEEEEE
Confidence 555666543 358999999765332 123567765543221111 11 0112235678999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|.+
T Consensus 77 V~a 79 (95)
T d2fnba_ 77 VIT 79 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.31 E-value=0.038 Score=40.41 Aligned_cols=70 Identities=19% Similarity=0.370 Sum_probs=42.2
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yr 136 (479)
+|..+.+..-. .+++.|.|.-.... ..-.++|....+... .... ..........|+||.|+|.|.+|
T Consensus 4 ~P~~l~v~~vt--~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~-------~~~~---~~~~~~~~~~i~~L~p~t~Y~~~ 71 (94)
T d1j8ka_ 4 RPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDGIH-------ELFP---APDGEEDTAELQGLRPGSEYTVS 71 (94)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTEEE-------EECC---CCCSSCCEEEECSCCCCSEEEEE
T ss_pred CCCCCEEEEec--CCEEEEEEeCCCccccceEEEEEeecCCCc-------eEEE---ecCCCccEEEECCCCCCCEEEEE
Confidence 36666665433 57999999765432 334677776554211 0000 01122345678999999999999
Q ss_pred eCC
Q 011679 137 IGS 139 (479)
Q Consensus 137 v~~ 139 (479)
|..
T Consensus 72 V~a 74 (94)
T d1j8ka_ 72 VVA 74 (94)
T ss_dssp EEE
T ss_pred EEE
Confidence 954
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.30 E-value=0.043 Score=40.13 Aligned_cols=58 Identities=17% Similarity=0.342 Sum_probs=36.1
Q ss_pred CCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC
Q 011679 71 GKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~ 139 (479)
.+++.|.|.-...... -.|+|............ .. .-.....|+||.|++.|.+||.+
T Consensus 13 ~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V~A 74 (94)
T d2dn7a1 13 MNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----FG------KDDQHFTVTGLHKGTTYIFRLAA 74 (94)
T ss_dssp TTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----EE------TTCCEEEEECCCTTCEEEEEEEE
T ss_pred CCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEE-----cC------CCccEEEEEccCCeeEEEEEEEE
Confidence 4789999997643322 35777765544332211 11 11223568999999999999964
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.24 E-value=0.009 Score=46.47 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=26.0
Q ss_pred EEEeCCCCCCCEEEEEeCC------CCCceeEEEECCCCC
Q 011679 121 QCLVDGLEYDTKYYYKIGS------GDSSREFWFQTPPKI 154 (479)
Q Consensus 121 ~v~l~gL~p~t~Y~Yrv~~------~~~s~~~~f~T~p~~ 154 (479)
...|++|+|++.|.+||.+ +.+|+...++|.+..
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCCC
Confidence 3568999999999999954 235778888886543
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.15 E-value=0.019 Score=43.04 Aligned_cols=59 Identities=17% Similarity=0.216 Sum_probs=35.6
Q ss_pred CCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC
Q 011679 71 GKAVIISWVTPHEP-----GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (479)
Q Consensus 71 ~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~ 139 (479)
.+++.|+|.-.... ..-.++|............. ...-.....++||+|+|.|.|||.+
T Consensus 16 ~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~Y~frV~A 79 (104)
T d1bpva_ 16 RHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF----------SNILENEFTVSGLTEDAAYEFRVIA 79 (104)
T ss_dssp TTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC----------SCCCSSEEEECSCCSSCCEEEEEEE
T ss_pred CCEEEEEEEeccccCcceEEEEEEEeecccccceeEEEe----------eccceeEEEEcCCCCCCEEEEEEEE
Confidence 47999999865322 12466776655433222110 1111234578999999999999964
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.65 E-value=0.039 Score=42.07 Aligned_cols=82 Identities=15% Similarity=0.245 Sum_probs=47.3
Q ss_pred CCCceEEEEeecCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCE
Q 011679 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (479)
Q Consensus 57 ~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 132 (479)
.+|..+++..+ .+++.|.|.-....+. -.|+|+....... . ... ..-.....|.+|.|++.
T Consensus 22 ~~P~~~~~~~~---~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~~-~-----~~~------~~~~~~~~i~~L~p~t~ 86 (113)
T d1x5ia1 22 EVPSSLHVRPL---VTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQ-T-----IKV------DYKQRYYTIENLDPSSH 86 (113)
T ss_dssp CSCSEEEEEEE---TTEEEEEEECCSCTTBCCCEEEEEECSSCGGGE-E-----EEC------CTTCCEEEECSCCSSCE
T ss_pred CCCEeeeeeeC---CCEEEEEEEccccCCccEEEEEEEeeeccccce-e-----eee------eCCccEEEEeccccCcE
Confidence 35777777654 3689999996543322 2566654433211 1 111 11233567899999999
Q ss_pred EEEEeCCC---CCc--eeEEEECCCC
Q 011679 133 YYYKIGSG---DSS--REFWFQTPPK 153 (479)
Q Consensus 133 Y~Yrv~~~---~~s--~~~~f~T~p~ 153 (479)
|.+||.+- +.| ..-.++|.|.
T Consensus 87 Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 87 YVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp ECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred EEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 99999542 222 2345667653
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.97 E-value=0.053 Score=39.41 Aligned_cols=59 Identities=17% Similarity=0.317 Sum_probs=36.8
Q ss_pred CCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC
Q 011679 71 GKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (479)
Q Consensus 71 ~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~ 139 (479)
.+++.|.|.....+ ..-.|+|....+...... ...+ .-...+.|+||+|++.|.++|.+
T Consensus 10 ~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~----~~~~------~~~t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 10 PTSLLISWDAPAVTVRYYRITYGETGGNSPVQE----FTVP------GSKSTATISGLKPGVDYTITVYA 69 (91)
T ss_dssp SSCEEEECCCCSSCCSEEEEEEEETTCCSCCEE----EEEE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCEEEEEEEccceEecEEEEEEEcCCCCceeEE----EEeC------CCccEEEeCCCCCCCEEEEEEEE
Confidence 57999999765433 234678877654322111 1111 11225789999999999999953
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.52 E-value=0.025 Score=42.57 Aligned_cols=70 Identities=14% Similarity=0.173 Sum_probs=40.0
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 133 (479)
.|..+.+..- ..+++.|.|.-..... .-.|+|.......... ... ...-.....|+||+|++.|
T Consensus 13 ~p~~l~~~~~--~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~----~~~------~~~~~~~~~i~~L~p~t~Y 80 (106)
T d1wfna1 13 PVGHLSFSEI--LDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRV----THY------LPNVTLEYRVTGLTALTTY 80 (106)
T ss_dssp CCSCCEEESC--CSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCC----CEE------ECSSCCEEEEESCCTTCEE
T ss_pred CCCCcEEEEe--cCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceE----EEe------cCCCeeEEEEccCCCCCEE
Confidence 4566665533 3579999998654332 1346665544322110 001 0112235678999999999
Q ss_pred EEEeCC
Q 011679 134 YYKIGS 139 (479)
Q Consensus 134 ~Yrv~~ 139 (479)
.+||.+
T Consensus 81 ~~~V~A 86 (106)
T d1wfna1 81 TIEVAA 86 (106)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999954
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=92.95 E-value=0.17 Score=37.55 Aligned_cols=71 Identities=18% Similarity=0.189 Sum_probs=41.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCC--C---C-CCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPH--E---P-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~--~---~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..|.+.... .+++.|+|.-.. . + ..-.|+|............ .. .........|.+|+|++
T Consensus 7 ~P~~v~~~~~~--~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~---~~------~~~~~~~~~i~~L~p~t 75 (105)
T d1cfba2 7 NPDNVVGQGTE--PNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN---NI------FDWRQNNIVIADQPTFV 75 (105)
T ss_dssp CCSCCEEECSS--TTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEE---EE------CCTTCCEEEECSCCSSC
T ss_pred CCcCeEEEEcc--CCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEE---Ee------cCCCccEEEECCCCCCC
Confidence 47777766543 579999997421 1 1 1235777655433221111 00 11223356789999999
Q ss_pred EEEEEeCC
Q 011679 132 KYYYKIGS 139 (479)
Q Consensus 132 ~Y~Yrv~~ 139 (479)
.|.+||.+
T Consensus 76 ~Y~~~V~A 83 (105)
T d1cfba2 76 KYLIKVVA 83 (105)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.79 E-value=0.3 Score=36.26 Aligned_cols=79 Identities=9% Similarity=-0.010 Sum_probs=44.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC---CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP---STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~---~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
+|..+...... ..++++++|.-..+.+. ..+.|............-..... .........+.+++|+|++.|.
T Consensus 7 ~P~~v~~i~~~-~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~t~Y~ 82 (107)
T d1cd9b1 7 SPSNLSCLMHL-TTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCV---AKKRQNNCSIPRKNLLLYQYMA 82 (107)
T ss_dssp CCEEEEEEEET-TTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEE---CCTTCCEEEEEGGGCCTTSCEE
T ss_pred CCcCCEEEEec-CCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeec---cccCccccEEEcCCCCcCceEE
Confidence 47777633322 35799999987644332 24555544332111110000000 1122346678899999999999
Q ss_pred EEeCCC
Q 011679 135 YKIGSG 140 (479)
Q Consensus 135 Yrv~~~ 140 (479)
+||.+.
T Consensus 83 frV~A~ 88 (107)
T d1cd9b1 83 IWVQAE 88 (107)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999753
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.91 E-value=0.077 Score=39.21 Aligned_cols=66 Identities=17% Similarity=0.292 Sum_probs=35.6
Q ss_pred eEEEEeecCCCCcEEEEEEcCCCCCC-----CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEE
Q 011679 61 QVHITQGDYDGKAVIISWVTPHEPGP-----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (479)
Q Consensus 61 ~v~l~~~~~~~~~~~v~W~t~~~~~~-----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 135 (479)
.+.+..+ .+++.|.|........ -.|+|....+......... . .-...+.|.+|+|++.|.+
T Consensus 10 ~l~v~~~---~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~--~--------~~~~~~~l~~L~p~t~Y~~ 76 (100)
T d2gysa4 10 SLQVTKD---GDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTET--L--------QNAHSMALPALEPSTRYWA 76 (100)
T ss_dssp EEEEC------CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEE--E--------ESCSEEECCCCCSSCCCEE
T ss_pred ccEEEEC---CCEEEEEEecCcccCCccceEEEEEEeecccceeceeecc--c--------CCceEEEeCCCCCCCeEEE
Confidence 4666553 3579999987743222 3577765444321111000 0 0123577899999999999
Q ss_pred EeCC
Q 011679 136 KIGS 139 (479)
Q Consensus 136 rv~~ 139 (479)
||.+
T Consensus 77 rVRa 80 (100)
T d2gysa4 77 RVRV 80 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9954
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.51 E-value=0.0048 Score=46.69 Aligned_cols=76 Identities=20% Similarity=0.330 Sum_probs=41.1
Q ss_pred CCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEEEEeCC------CCCce
Q 011679 71 GKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------GDSSR 144 (479)
Q Consensus 71 ~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~------~~~s~ 144 (479)
.+++.|+|.-........+.|...=.............. ......+...|.+|+|++ |.+||.+ +.+|+
T Consensus 18 ~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~~----~~~~~~~~~~~~~L~~~t-Y~~rV~A~n~~G~g~~S~ 92 (102)
T d2dtge1 18 NNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTR----KHFALERGCRLRGLSPGN-YSVRIRATSLAGNGSWTE 92 (102)
T ss_dssp SSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCS----SSCCCTTCCCCCSCCSSE-ECCCCCEEETTBCCCCCC
T ss_pred CCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeeee----ecccceEEEEEeccceee-EEEEEEEEcCCccCCCCC
Confidence 478999998665444445655542111000000000000 011233456789999975 9999853 45677
Q ss_pred eEEEECC
Q 011679 145 EFWFQTP 151 (479)
Q Consensus 145 ~~~f~T~ 151 (479)
...|.|+
T Consensus 93 ~v~f~~~ 99 (102)
T d2dtge1 93 PTYFYVT 99 (102)
T ss_dssp CCEECCC
T ss_pred CEEEEcc
Confidence 7788773
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.07 E-value=0.41 Score=36.17 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=19.9
Q ss_pred EeCCCCCCCEEEEEeCC------CCCceeEEEEC
Q 011679 123 LVDGLEYDTKYYYKIGS------GDSSREFWFQT 150 (479)
Q Consensus 123 ~l~gL~p~t~Y~Yrv~~------~~~s~~~~f~T 150 (479)
.+.+|+|++.|.+||.+ +..|+...+.+
T Consensus 75 ~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~ 108 (117)
T d1wj3a_ 75 AELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPR 108 (117)
T ss_dssp EEEECCCSSCEEEEEEEEESSCCCCBCCCEEECC
T ss_pred EEeeccCCcEEEEEEEEEcCCccCCCCCCEEEec
Confidence 34589999999999953 34566656643
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.96 E-value=0.16 Score=45.54 Aligned_cols=65 Identities=20% Similarity=0.290 Sum_probs=37.2
Q ss_pred EEEEecCCCCCCcHHHHHHHHHh----CCCEEEEcCcccccCcccccccchhhhHHHHHHH-hhhccCCeEEcCCCcccc
Q 011679 162 FGIIGDLGQTYNSLSTLEHYMES----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVE-RSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 162 f~~~gD~~~~~~~~~~l~~i~~~----~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~~~v~GNHD~~ 236 (479)
+.++||+|..... +..+.+. .-.-.|++||++...... -+...-.+. .+.-..-++...||||..
T Consensus 47 v~VvGDlHG~~~D---L~~if~~~g~p~~~~ylFLGDYVDRG~~s-------lEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 47 VTVCGDVHGQFHD---LMELFRIGGKSPDTNYLFMGDYVDRGYYS-------VETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp EEEECBCTTCHHH---HHHHHHHHCCTTTSCEEECSCCCCSSSSH-------HHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred eEEEeeCCCCHHH---HHHHHHhcCCCccceEEecCcccCCCCcc-------eeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 8999999987532 2233322 223578999999653321 122211111 112234599999999975
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.91 E-value=0.2 Score=45.61 Aligned_cols=66 Identities=18% Similarity=0.266 Sum_probs=37.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHH-h--CC--CEEEEcCcccccCcccccccchhhhHHHHHHH-hhhccCCeEEcCCCcc
Q 011679 161 KFGIIGDLGQTYNSLSTLEHYME-S--GA--QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVE-RSAAYQPWIWSAGNHE 234 (479)
Q Consensus 161 ~f~~~gD~~~~~~~~~~l~~i~~-~--~p--d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~~~v~GNHD 234 (479)
.+.++||+|..... +-.+.+ . .+ .-.|++||++..... ..+...-.+. .+.-.--++...||||
T Consensus 61 pv~VvGDiHGq~~D---L~~if~~~g~p~~~~~ylFLGDYVDRG~~-------slEvi~lL~~lKi~yP~~v~LLRGNHE 130 (324)
T d1s95a_ 61 KITVCGDTHGQFYD---LLNIFELNGLPSETNPYIFNGDFVDRGSF-------SVEVILTLFGFKLLYPDHFHLLRGNHE 130 (324)
T ss_dssp EEEEECCCTTCHHH---HHHHHHHHCCCBTTBCEEEESCCSSSSTT-------HHHHHHHHHHHHHHSTTTEEEECCTTS
T ss_pred CEEEEEECCCCHHH---HHHHHHHCCCCCCCCeEEEecccccCcCc-------ceeehHHHHHHHHhCCCcEEeccCCcc
Confidence 68899999987432 223332 2 23 348999999965321 1222221111 1112335999999999
Q ss_pred cc
Q 011679 235 IE 236 (479)
Q Consensus 235 ~~ 236 (479)
..
T Consensus 131 ~~ 132 (324)
T d1s95a_ 131 TD 132 (324)
T ss_dssp SH
T ss_pred cc
Confidence 85
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.70 E-value=0.48 Score=34.29 Aligned_cols=71 Identities=13% Similarity=0.040 Sum_probs=40.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCCCE--EEEeecCCCCce-EEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPST--VSYGTSADKFDF-TAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~--v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
+|..|.+.... ...++.|.-....+... +++-........ ...... .........+.+|.+++.|+
T Consensus 3 ~P~nv~v~s~n---~~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~~Y~ 71 (98)
T d1fyhb1 3 TPTNVTIESYN---MNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACIN--------ISHHYCNISDHVGDPSNSLW 71 (98)
T ss_dssp CCEEEEEECBS---SCCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEEE--------ESSSEEECGGGCCSTTSCEE
T ss_pred cCCceEEEEeC---CcEEEEECCCCCCCCCceeEEEEEeccccceeEEeeee--------cccceeeeEecccCCCCEEE
Confidence 37777776543 35579999765444333 333333322221 111111 12234456788999999999
Q ss_pred EEeCC
Q 011679 135 YKIGS 139 (479)
Q Consensus 135 Yrv~~ 139 (479)
+||.+
T Consensus 72 fRV~A 76 (98)
T d1fyhb1 72 VRVKA 76 (98)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=89.40 E-value=0.23 Score=44.62 Aligned_cols=65 Identities=23% Similarity=0.338 Sum_probs=37.3
Q ss_pred EEEEecCCCCCCcHHHHHHHHHh----CCCEEEEcCcccccCcccccccchhhhHHHHHHH-hhhccCCeEEcCCCcccc
Q 011679 162 FGIIGDLGQTYNSLSTLEHYMES----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVE-RSAAYQPWIWSAGNHEIE 236 (479)
Q Consensus 162 f~~~gD~~~~~~~~~~l~~i~~~----~pd~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~~~v~GNHD~~ 236 (479)
+.++||+|..... +..+.+. .-.-.|++||++..... ..+...-.+. .+.-..-++...||||..
T Consensus 54 v~VvGDiHG~~~D---L~~if~~~g~p~~~~ylFLGDYVDRG~~-------slE~i~lL~aLKi~~P~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 54 LKICGDIHGQYYD---LLRLFEYGGFPPESNYLFLGDYVDRGKQ-------SLETICLLLAYKIKYPENFFLLRGNHECA 123 (294)
T ss_dssp EEEECBCTTCHHH---HHHHHHHHCCTTSSCEEECSCCSSSSSC-------HHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred eEEEEECCCChHh---HHHHHhhcCCCccceEEeeccccCCCcc-------chHHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 7999999986432 2223222 23447899999965322 1222221111 111234599999999986
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.22 E-value=0.073 Score=40.82 Aligned_cols=83 Identities=17% Similarity=0.165 Sum_probs=46.6
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCC------CCCCCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPH------EPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~------~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 131 (479)
.|..|.+..+. ..+++.|+|.-.. ......+.|....+...... . . . ...-...++|+||+|++
T Consensus 13 pP~~v~v~~~~-s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~~~---~---~--~-~~~~~~~~~i~~L~~~t 82 (117)
T d2cspa1 13 PPQDVTVQAGV-TPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAE---V---I--F-PTADSTAVELVRLRSLE 82 (117)
T ss_dssp CCEEEEECCCS-STTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEEEE---E---C--C-TTCSEEEEESHHHHHHT
T ss_pred CCCccEEEEec-CCCEEEEEEcCCCccccCcccccceEEEEEEeeccccee---e---e--e-eccceeeeeccCCCCCc
Confidence 47777664432 2468999998532 12234677875443221110 0 0 0 11223457899999999
Q ss_pred EEEEEeCC------CCCceeEEEEC
Q 011679 132 KYYYKIGS------GDSSREFWFQT 150 (479)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~f~T 150 (479)
.|.+||.+ +..|..-.++|
T Consensus 83 ~Y~v~V~A~n~~G~s~~S~~v~i~t 107 (117)
T d2cspa1 83 AKGVTVRTLSAQGESVDSAVAAVPP 107 (117)
T ss_dssp CSCBEEEEEESSCCCCCCSCBCCCH
T ss_pred EEEEEEEEEcCCCcCCCCCCEEeeC
Confidence 99999853 23455444444
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.08 E-value=0.54 Score=33.94 Aligned_cols=70 Identities=13% Similarity=0.080 Sum_probs=40.5
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC---CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP---STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~---~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
.|..+.+.... .+++++.|.-..+.+. -.|+|........... .. ...-.....+.+|.|++.|+
T Consensus 6 ~P~n~~~~~~~--~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~------~~----~~~~~~~~~~~~L~~~~~Y~ 73 (95)
T d1bqua1 6 KPKNLSCIVNE--GKKMRCEWDGGRETHLETNFTLKSEWATHKFADCK------AK----RDTPTSCTVDYSTVYFVNIE 73 (95)
T ss_dssp CCEEEEEEEET--TSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEE------CC----SSCTTEEECSSCCCTTSCEE
T ss_pred CCeeeEEEEcc--CCEEEEEEeCcccCCCceEEEEEEEEcccceeEee------cc----cccceeeeeeeecCCCcEEE
Confidence 47777777553 4789999988654322 3455554332111100 00 01111123567999999999
Q ss_pred EEeCC
Q 011679 135 YKIGS 139 (479)
Q Consensus 135 Yrv~~ 139 (479)
+||.+
T Consensus 74 f~V~A 78 (95)
T d1bqua1 74 VWVEA 78 (95)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.06 E-value=0.2 Score=47.90 Aligned_cols=27 Identities=7% Similarity=0.021 Sum_probs=21.6
Q ss_pred HHHHHHHHHHcCccEEEecccccceee
Q 011679 335 RAAFESWFVRYKVDVVFAGHVHAYERS 361 (479)
Q Consensus 335 ~~~l~~l~~~~~VdlvlsGH~H~y~r~ 361 (479)
.+++.+.+++++.++++-||.=..+-.
T Consensus 249 ~~a~~~FL~~n~L~~IIR~HE~~~~Gy 275 (473)
T d1auia_ 249 YPAVCEFLQHNNLLSILRAHEAQDAGY 275 (473)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCTTSE
T ss_pred hHHHHHHHHHcCCcEEEEcCcchhhhh
Confidence 357788999999999999998654443
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.89 E-value=0.077 Score=41.02 Aligned_cols=21 Identities=24% Similarity=0.202 Sum_probs=17.5
Q ss_pred EEEEEeCCCCCCCEEEEEeCC
Q 011679 119 IHQCLVDGLEYDTKYYYKIGS 139 (479)
Q Consensus 119 ~~~v~l~gL~p~t~Y~Yrv~~ 139 (479)
.....|+||+|+|.|.++|.+
T Consensus 81 ~~~~~l~~L~p~T~Y~~~V~A 101 (125)
T d2dtge3 81 HPGWLMRGLKPWTQYAIFVKT 101 (125)
T ss_dssp CCEEEECSCCSSCBCCBEEEE
T ss_pred cCEEEECCCccCCEEEEEEEE
Confidence 345679999999999999853
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.41 E-value=0.4 Score=34.80 Aligned_cols=66 Identities=9% Similarity=0.065 Sum_probs=34.1
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCCC--------CEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCC
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP--------STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~~--------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p 129 (479)
.|..|.+....+ .+.+.|.|........ -.|+|....+.......- . .. ....|.|
T Consensus 4 PP~nl~v~~~~~-~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~----------~-~~----t~~~L~p 67 (94)
T d3d85d3 4 PPKNLQLKPLKN-SRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVF----------T-DK----TSATVIC 67 (94)
T ss_dssp CCEEEEEEEC-----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEE----------E-SS----SEEEECC
T ss_pred CCcccEEEEecC-CCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEecc----------c-cc----eEEEecC
Confidence 478888775433 3679999998743211 245565444322211110 0 01 1235889
Q ss_pred CCEEEEEeCC
Q 011679 130 DTKYYYKIGS 139 (479)
Q Consensus 130 ~t~Y~Yrv~~ 139 (479)
++.|.+||.+
T Consensus 68 ~~~Y~v~VRa 77 (94)
T d3d85d3 68 RKNASISVRA 77 (94)
T ss_dssp CSSCEEEEEE
T ss_pred CCCEEEEEEE
Confidence 9999999965
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.84 E-value=0.53 Score=37.99 Aligned_cols=32 Identities=19% Similarity=0.204 Sum_probs=24.7
Q ss_pred EEEeCCCCCCCEEEEEeCC------C---CCceeEEEECCC
Q 011679 121 QCLVDGLEYDTKYYYKIGS------G---DSSREFWFQTPP 152 (479)
Q Consensus 121 ~v~l~gL~p~t~Y~Yrv~~------~---~~s~~~~f~T~p 152 (479)
...|+||+|+|.|.+||.+ + ..+....+||+|
T Consensus 156 ~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 156 SLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp EEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 5678999999999999843 1 135677888876
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.92 E-value=0.92 Score=33.04 Aligned_cols=72 Identities=13% Similarity=0.045 Sum_probs=43.4
Q ss_pred CCceEEEEeecCCCCcEEEEEEcCCCCC---CCEEEEeecCCCCceEEEeEEEEEeeecceeceEEEEEeCCCCCCCEEE
Q 011679 58 SPQQVHITQGDYDGKAVIISWVTPHEPG---PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (479)
Q Consensus 58 ~P~~v~l~~~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 134 (479)
.|..|++.... ...++.|.-....+ .-.|||.......+..+..- .. .........+.+|.++..|+
T Consensus 6 ~P~nv~~~s~n---~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~c-~~------~t~~~~~~~~~~l~~~~~Y~ 75 (99)
T d1y6kr1 6 SPPSVWFEAEF---FHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQC-SQ------TLSYDLTAVTLDLYHSNGYR 75 (99)
T ss_dssp CCSCEEEEEET---TEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEE-ES------SSEEECGGGGTTGGGSSCEE
T ss_pred CCCcceEEEEC---CEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEee-cc------ccccceeeeeeecCCCCEEE
Confidence 37778886653 47889997553322 24788876655545444321 11 00011122467999999999
Q ss_pred EEeCC
Q 011679 135 YKIGS 139 (479)
Q Consensus 135 Yrv~~ 139 (479)
+||.+
T Consensus 76 fRVrA 80 (99)
T d1y6kr1 76 ARVRA 80 (99)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|