Citrus Sinensis ID: 011680
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 479 | 2.2.26 [Sep-21-2011] | |||||||
| Q949Y3 | 475 | Bifunctional purple acid | yes | no | 0.972 | 0.981 | 0.748 | 0.0 | |
| Q93WP4 | 481 | Phosphoenolpyruvate phosp | N/A | no | 0.939 | 0.935 | 0.700 | 0.0 | |
| Q38924 | 469 | Fe(3+)-Zn(2+) purple acid | no | no | 0.922 | 0.942 | 0.595 | 1e-156 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.924 | 0.952 | 0.585 | 1e-156 | |
| Q9SIV9 | 468 | Purple acid phosphatase 1 | no | no | 0.926 | 0.948 | 0.581 | 1e-151 | |
| O23244 | 466 | Purple acid phosphatase 2 | no | no | 0.931 | 0.957 | 0.576 | 1e-151 | |
| Q9SE00 | 473 | Purple acid phosphatase 1 | N/A | no | 0.945 | 0.957 | 0.558 | 1e-150 | |
| Q09131 | 464 | Purple acid phosphatase O | no | no | 0.906 | 0.935 | 0.588 | 1e-150 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.914 | 0.939 | 0.576 | 1e-148 | |
| P80366 | 432 | Fe(3+)-Zn(2+) purple acid | N/A | no | 0.883 | 0.979 | 0.570 | 1e-141 |
| >sp|Q949Y3|PPA26_ARATH Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/466 (74%), Positives = 405/466 (86%)
Query: 11 LFQIMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGD 70
L I ++L+ +L L G + ITS FIR+EWP+ DIPL + VF +PKG+NAPQQV ITQGD
Sbjct: 4 LVIISVFLSSVLLLYRGESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVHITQGD 63
Query: 71 YDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130
YDGKAVIISWVTP+E GS++V YG ++ KY+ A+GT NYTFYKYKSG+IHHCLV DLE
Sbjct: 64 YDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCLVSDLE 123
Query: 131 YDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQS 190
+DTKYYYKI G+SSREFWF TPP +HPDA Y FGIIGD+GQT+NSLSTL+HYM+SG Q+
Sbjct: 124 HDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYMESGAQA 183
Query: 191 VLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFK 250
VLFLGDLSYADRY+YNDVG+RWDSWGRF+E+S AYQPW+WSAGNHE+++MP MGEV PF+
Sbjct: 184 VLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGEVTPFR 243
Query: 251 SYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREK 310
+YL R TPY ASKS++PLWYA+RRASAHIIVLSSYSP+VKYTPQW WL EEL +VDREK
Sbjct: 244 NYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVDREK 303
Query: 311 TPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIH 370
TPWLIVLMHVP+Y+SN H+MEGESMRA FE WFV +VD IFAGHVHAYERSYRISN+
Sbjct: 304 TPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRISNVR 363
Query: 371 YNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNR 430
YN +SGDRYPVPDKSAPVY+TVGDGGNQEGLAGRF +PQP+YSAFREASYGHSTL+IKNR
Sbjct: 364 YNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTLDIKNR 423
Query: 431 THAFYHWNRNDDGNKVTTDSVVFHNQYWSNNLRRRKLKKNHLKPRV 476
THA YHWNRNDDG KV TD V HNQYW N+RRRKLKK++++ V
Sbjct: 424 THAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIRSVV 469
|
Metallo-phosphoesterase involved in phosphate metabolism. Acid phosphatase activity with phosphoenolpyruvate, inorganic pyrophosphate, phenyl-phosphate and p-nitrophenyl-phosphate as the most effective substrates. No activity with phytic acid, phosphocholine or bis-p-nitrophenyl-phosphate. Has a peroxidase activity at alkaline pH. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7 |
| >sp|Q93WP4|PEPP_ALLCE Phosphoenolpyruvate phosphatase OS=Allium cepa GN=ACPEPP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/451 (70%), Positives = 376/451 (83%), Gaps = 1/451 (0%)
Query: 11 LFQIMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGD 70
+ ++ ++ LL S++ R TS F+R+E+P+ DIP+ +K F +PK +PQQV ITQGD
Sbjct: 10 FYLLLFHIILLCSVDKTLCRQTSSFVRSEFPAVDIPIDSKEFAVPKNQFSPQQVHITQGD 69
Query: 71 YDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130
YDGKAVI+SWVT + G + V YG YD SA+G TNYT+Y Y SGYIHHCL+D LE
Sbjct: 70 YDGKAVIVSWVTFIDPGKSEVVYGTSPNSYDHSAQGKTTNYTYYDYTSGYIHHCLLDKLE 129
Query: 131 YDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQS 190
YDTKYYYKIG GD++REFWF TPP+IHPDA YTFGIIGDLGQTYNSLSTL+HYM+S GQ+
Sbjct: 130 YDTKYYYKIGKGDAAREFWFHTPPQIHPDASYTFGIIGDLGQTYNSLSTLEHYMKSKGQT 189
Query: 191 VLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFK 250
VLF+GDLSYADRY N+ G RWDSWGRF+E+S AYQPWIW+ GNHEIE+ P++GEV PF+
Sbjct: 190 VLFVGDLSYADRYSCNN-GTRWDSWGRFVERSVAYQPWIWTVGNHEIEYRPDLGEVFPFR 248
Query: 251 SYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREK 310
+YL+R TP+ AS S++PLWY+IRRASAHIIVLSSYSP+VKYTPQW WL EEL +VDREK
Sbjct: 249 AYLNRYPTPHLASASSSPLWYSIRRASAHIIVLSSYSPFVKYTPQWLWLSEELTRVDREK 308
Query: 311 TPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIH 370
TPWLIVLMH PLY+SN HYMEGESMR FESWFV +VD +FAGHVHAYERSYRISNI
Sbjct: 309 TPWLIVLMHAPLYNSNEAHYMEGESMRVAFESWFVQYKVDLVFAGHVHAYERSYRISNIV 368
Query: 371 YNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNR 430
YN TSG+RYP+PDKSAPVY+TVGDGGNQEGLA RF + QP+YSAFRE+SYGHSTLE++NR
Sbjct: 369 YNITSGNRYPIPDKSAPVYITVGDGGNQEGLAERFSESQPDYSAFRESSYGHSTLELRNR 428
Query: 431 THAFYHWNRNDDGNKVTTDSVVFHNQYWSNN 461
THAFY WNRNDDG + D ++F NQYW++N
Sbjct: 429 THAFYQWNRNDDGKHIPVDRIIFRNQYWASN 459
|
Phosphoenolpyruvate phosphatase that probably operates in the vacuole to release phosphate from phosphoenolpyruvate (PEP) under phosphorus starvation. Allium cepa (taxid: 4679) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 6 EC: 0 |
| >sp|Q38924|PPA12_ARATH Fe(3+)-Zn(2+) purple acid phosphatase 12 OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 552 bits (1422), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/447 (59%), Positives = 335/447 (74%), Gaps = 5/447 (1%)
Query: 14 IMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDG 73
I+ L++L+ G TS ++R D+PL + VF++P G N+PQQV +TQG+++G
Sbjct: 15 IIFLLSVLVEFCYGG--FTSEYVRGSDLPDDMPLDSDVFEVPPGPNSPQQVHVTQGNHEG 72
Query: 74 KAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133
VIISWVTP + GS VQY +K AE TV Y F+ Y SGYIHHCL+DDLE+DT
Sbjct: 73 NGVIISWVTPVKPGSKTVQYWCENEKSRKQAEATVNTYRFFNYTSGYIHHCLIDDLEFDT 132
Query: 134 KYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHY-MQSG-GQSV 191
KYYY+IG G SR FWF PPK PD PYTFG+IGDLGQTY+S STL HY M G GQ+V
Sbjct: 133 KYYYEIGSGKWSRRFWFFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQAV 192
Query: 192 LFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKS 251
LF+GDLSYADRY +D RWD+WGRF+E+S AYQPWIW+AGNHEI+F+P++GE+ PFK
Sbjct: 193 LFVGDLSYADRYPNHDNN-RWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFKP 251
Query: 252 YLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311
+++R TP+ AS S +PLWY+I+RASA+IIV+S YS Y YTPQ+ WL +EL+ V+R +T
Sbjct: 252 FMNRYHTPHKASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTET 311
Query: 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHY 371
PWLIVL+H P YSS V HYMEGE++R ++E WFV +VD +FAGHVHAYERS R+SNI Y
Sbjct: 312 PWLIVLVHSPFYSSYVHHYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERSERVSNIAY 371
Query: 372 NFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRT 431
N +G P+ D+SAP+Y+T+GDGGN EGL + PQP YSAFREAS+GH LEIKNRT
Sbjct: 372 NIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNRT 431
Query: 432 HAFYHWNRNDDGNKVTTDSVVFHNQYW 458
HA++ WNRN DGN V DSV N++W
Sbjct: 432 HAYFSWNRNQDGNAVAADSVWLLNRFW 458
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 551 bits (1419), Expect = e-156, Method: Compositional matrix adjust.
Identities = 261/446 (58%), Positives = 333/446 (74%), Gaps = 3/446 (0%)
Query: 15 MLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGK 74
+L + L +N A ITS FIR + D+PL + VF +P G+NAPQQV ITQGD+ GK
Sbjct: 10 LLAVVLAAVMNAAIAGITSSFIRKVEKTVDMPLDSDVFRVPPGYNAPQQVHITQGDHVGK 69
Query: 75 AVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134
A+I+SWVT +E GS++V Y ++ A G + YT++ Y SGYIHHC + +LEY+TK
Sbjct: 70 AMIVSWVTVDEPGSSKVVYWSENSQHKKVARGNIRTYTYFNYTSGYIHHCTIRNLEYNTK 129
Query: 135 YYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVL 192
YYY++G G+++R FWF TPP++ PD PYTFG+IGDLGQ+++S TL HY ++ GQ+VL
Sbjct: 130 YYYEVGIGNTTRSFWFTTPPEVGPDVPYTFGLIGDLGQSFDSNRTLTHYERNPIKGQAVL 189
Query: 193 FLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSY 252
F+GDLSYAD Y +D +RWD+WGRF+E+S AYQPWIW+AGNHEI+F P +GE PFK +
Sbjct: 190 FVGDLSYADNYPNHD-NVRWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPF 248
Query: 253 LHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTP 312
R PY AS ST WY I+RASA+IIVLSSYS Y KYTPQ+ WL EEL KV+R +TP
Sbjct: 249 TKRYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETP 308
Query: 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYN 372
WLIVLMH P Y+S HYMEGE+MR ++E WFV +VD +FAGHVHAYERS R+SN+ Y+
Sbjct: 309 WLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERVSNVAYD 368
Query: 373 FTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTH 432
+G PV D+SAPVY+T+GDGGN EGLA DPQP YSAFREAS+GH+TL+IKNRTH
Sbjct: 369 IVNGKCTPVRDQSAPVYITIGDGGNLEGLATNMTDPQPEYSAFREASFGHATLDIKNRTH 428
Query: 433 AFYHWNRNDDGNKVTTDSVVFHNQYW 458
A+Y W+RN DG V DS+ N++W
Sbjct: 429 AYYSWHRNQDGYAVEADSMWVSNRFW 454
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 535 bits (1378), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/447 (58%), Positives = 323/447 (72%), Gaps = 3/447 (0%)
Query: 14 IMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDG 73
I+L L +L+ ITSR++R + D+PL + VF +P G+NAPQQV ITQGD +G
Sbjct: 12 IVLVLCCVLNSLLCNGGITSRYVRKLEATVDMPLDSDVFRVPCGYNAPQQVHITQGDVEG 71
Query: 74 KAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133
KAVI+SWVT GSN+V Y K A G Y FY Y SG+IHHC + +LEYDT
Sbjct: 72 KAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHHCPIRNLEYDT 131
Query: 134 KYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQ--SGGQSV 191
KYYY +G G + R+FWF TPP+I PD PYTFG+IGDLGQ+Y+S TL HY + GQ+V
Sbjct: 132 KYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQAV 191
Query: 192 LFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKS 251
LF+GD+SYAD Y +D RWDSWGRF E+S AYQPWIW+ GNHE++F P +GE PFK
Sbjct: 192 LFVGDISYADTYPDHD-NRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPFKP 250
Query: 252 YLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311
+ HR TPY +S ST P WY+I+R A+IIVL+SYS Y KYTPQ+ WL EE KV+R +T
Sbjct: 251 FTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRTET 310
Query: 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHY 371
PWLIVLMH P Y+S HYMEGE+MR ++E+WFV +VD +FAGHVHAYERS R+SNI Y
Sbjct: 311 PWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNIAY 370
Query: 372 NFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRT 431
N +G PV D+SAPVY+T+GDGGN EGLA + +PQP YSAFREAS+GH+ IKNRT
Sbjct: 371 NVVNGICTPVKDQSAPVYITIGDGGNIEGLATKMTEPQPKYSAFREASFGHAIFSIKNRT 430
Query: 432 HAFYHWNRNDDGNKVTTDSVVFHNQYW 458
HA Y W+RN DG V D + F+N++W
Sbjct: 431 HAHYGWHRNHDGYAVEGDRMWFYNRFW 457
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/458 (57%), Positives = 337/458 (73%), Gaps = 12/458 (2%)
Query: 7 KLVPLFQIMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRI 66
++ + + ++L++ +N+GT TS F+RT PS ++ L + F P GHNAP+QV I
Sbjct: 2 RMNKILLVFVFLSIATVINSGT---TSNFVRTAQPSTEMSL--ETFPSPAGHNAPEQVHI 56
Query: 67 TQGDYDGKAVIISWVTP-NELGSNRVQYGKLE----KKYDSSAEGTVTNYTFYKYKSGYI 121
QGDY+G+ +IISWVTP N GSN V Y K K + ++Y FY Y SG++
Sbjct: 57 VQGDYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTSGFL 116
Query: 122 HHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLK 181
HH + LEYDTKY Y++G S R+F F +PPK+ PD PYTFGIIGDLGQT S TL
Sbjct: 117 HHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLY 176
Query: 182 HYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFM 240
HYM + GQ+VLF GDLSYAD + +D +WDSWGRF+E AAYQ +I++AGNHEI+F+
Sbjct: 177 HYMSNPKGQAVLFPGDLSYADDHPNHDQR-KWDSWGRFVEPCAAYQTFIYAAGNHEIDFV 235
Query: 241 PNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLR 300
PN+GE FK Y+HR Y ASKS +PLWY+IRRASAHIIVLSSYS Y KYTPQ+ WL
Sbjct: 236 PNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLE 295
Query: 301 EELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360
+ELKKV+RE+TPWLIV++H P Y+SN HYMEGESMRA+FESWFV+S+VD + +GHVH+Y
Sbjct: 296 QELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSY 355
Query: 361 ERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASY 420
ERS R+SNI YN T+G YPV D SAP+Y+T+GDGGN EG+A F DPQP+YSA+REAS+
Sbjct: 356 ERSERVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYREASF 415
Query: 421 GHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQYW 458
GH+ LEI NRTHA+Y W+RN D V DS++ HN+Y+
Sbjct: 416 GHAVLEIYNRTHAYYTWHRNQDNEPVAADSIMLHNRYF 453
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SE00|PPAF1_IPOBA Purple acid phosphatase 1 OS=Ipomoea batatas GN=PAP1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 532 bits (1370), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/464 (55%), Positives = 340/464 (73%), Gaps = 11/464 (2%)
Query: 7 KLVPLFQIMLYLTLLLSLNN-GTARITSRFIR---TEWPSA---DIPLHNKVFDIPKGHN 59
+LV + L L L+L+ A +TS ++R + P+A D+P + VF +P G+N
Sbjct: 2 RLVVVGLWCLILGLILNPTKFCDAGVTSSYVRKSLSALPNAEDVDMPWDSDVFAVPSGYN 61
Query: 60 APQQVRITQGDYDGKAVIISWVTP-NELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKS 118
APQQV ITQGDY+G+ VIISW TP ++ G+N+V Y K A GTV Y +Y Y S
Sbjct: 62 APQQVHITQGDYEGRGVIISWTTPYDKAGANKVVYWSENSKSQKRAMGTVVTYKYYNYTS 121
Query: 119 GYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLS 178
+IHHC + DLEYDTKYYY++G GD+ R+FWF TPPK PD PY FG+IGD+GQT++S +
Sbjct: 122 AFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNT 181
Query: 179 TLKHYMQSG--GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHE 236
TL HY Q+ GQ+VLF+GDLSY++R+ +D RWD+WGRF E+S AYQPWIW+AGNHE
Sbjct: 182 TLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNN-RWDTWGRFSERSVAYQPWIWTAGNHE 240
Query: 237 IEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQW 296
I++ P++GE PF + +R TP+ AS S +PLWYAI+RASAHIIVLSSYS +VKY+PQ+
Sbjct: 241 IDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQY 300
Query: 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGH 356
W EL+KV+R +TPWLIVL+H PLY+S HYMEGE+MRA+FE +FV+ +VD +F+GH
Sbjct: 301 KWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGH 360
Query: 357 VHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFR 416
VH+YERS R+SN+ YN + PV D+SAPVY+T+GDGGN EGLA PQP+YSAFR
Sbjct: 361 VHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFR 420
Query: 417 EASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQYWSN 460
EAS+GH +IKNRTHA + W+RN DG V DS+ N+YW++
Sbjct: 421 EASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRYWAS 464
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q09131|PPAF_SOYBN Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2 | Back alignment and function description |
|---|
Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/440 (58%), Positives = 321/440 (72%), Gaps = 6/440 (1%)
Query: 21 LLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISW 80
+ N G+ +S FIR + D+PL + VF +P G+NAPQQV ITQGD GKAVI+SW
Sbjct: 17 CVMCNGGS---SSPFIRKVEKTVDMPLDSDVFAVPPGYNAPQQVHITQGDLVGKAVIVSW 73
Query: 81 VTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG 140
VT +E GS+ V Y AEG + Y F+ Y SG+IHH + +LEY TKYYY++G
Sbjct: 74 VTVDEPGSSEVHYWSENSDKKKIAEGKLVTYRFFNYSSGFIHHTTIRNLEYKTKYYYEVG 133
Query: 141 DGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLS 198
G+++R+FWF TPP+I PD PYTFG+IGDLGQ+++S TL HY + GQ+VLF+GDLS
Sbjct: 134 LGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLS 193
Query: 199 YADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIAT 258
YAD Y +D IRWDSWGRF E+S AYQPWIW+AGNHE F P +GE +PFK Y HR
Sbjct: 194 YADNYPNHD-NIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHV 252
Query: 259 PYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318
PY AS+ST+P WY+I+RASAHIIVL+SYS Y KYTPQ+ WL +EL KV+R +TPWLIVLM
Sbjct: 253 PYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLM 312
Query: 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDR 378
H P Y+S HYMEGE+MR ++E WFV +VD +FAGHVHAYERS R+SN+ YN +G
Sbjct: 313 HSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLC 372
Query: 379 YPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWN 438
PV DKSAPVY+T+GDGG EGLA +PQP YSAFREAS+GH+ +I NRTHA Y W+
Sbjct: 373 APVNDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWH 432
Query: 439 RNDDGNKVTTDSVVFHNQYW 458
RN DG V DS+ N+YW
Sbjct: 433 RNQDGVAVEADSLWSFNRYW 452
|
Glycine max (taxid: 3847) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 525 bits (1351), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/451 (57%), Positives = 329/451 (72%), Gaps = 13/451 (2%)
Query: 15 MLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGK 74
L+L++ +N G ITS+F+R PS ++ L F P G+N P+QV +TQGD+DG+
Sbjct: 9 FLFLSITTVINGG---ITSKFVRQALPSIEMSL--DTFPSPGGYNTPEQVHLTQGDHDGR 63
Query: 75 AVIISWVTP-NELGSNRVQY-----GKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128
+I+SWVTP N GSN V Y G K A + +Y FY Y SG++HH +
Sbjct: 64 GMIVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLHHATIKG 123
Query: 129 LEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS-G 187
LEYDTKY Y++G S R+F F TPPKI PD PYTFGIIGDLGQTY S TL HYM +
Sbjct: 124 LEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMSNPK 183
Query: 188 GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVI 247
GQ+VLF GDLSYAD + +D +WD+WGRF+E AAYQP+I++AGNHEI+F+PN+GE
Sbjct: 184 GQAVLFAGDLSYADDHPNHDQR-KWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPH 242
Query: 248 PFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVD 307
FK Y HR Y AS+ST+PLWY++RRASAHIIVLSSYS Y KYTPQ+ WL +ELK V+
Sbjct: 243 AFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVN 302
Query: 308 REKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRIS 367
RE+TPWLIV++H P Y+SN HYMEGESMR +FESW V+S+VD + +GHVHAYERS RIS
Sbjct: 303 REETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERIS 362
Query: 368 NIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEI 427
NI YN T+G PV D +AP+Y+T+GDGGN EG+A F+DPQP+YSA+REAS+GH+ LEI
Sbjct: 363 NIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVDPQPSYSAYREASFGHAVLEI 422
Query: 428 KNRTHAFYHWNRNDDGNKVTTDSVVFHNQYW 458
NRTHA Y W+RN D V DS++ HN+++
Sbjct: 423 MNRTHAQYTWHRNQDNEPVAADSIMLHNRHF 453
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|P80366|PPAF_PHAVU Fe(3+)-Zn(2+) purple acid phosphatase OS=Phaseolus vulgaris PE=1 SV=2 | Back alignment and function description |
|---|
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/426 (57%), Positives = 312/426 (73%), Gaps = 3/426 (0%)
Query: 35 FIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYG 94
F+R + D+PL + VF +P G+NAPQQV ITQGD G+A+IISWVT +E GS+ V+Y
Sbjct: 1 FVRKTNKNRDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYW 60
Query: 95 KLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPP 154
+ A+G ++ Y F+ Y SG+IHH + L+Y+TKYYY++G +++R F F TPP
Sbjct: 61 SEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 120
Query: 155 KIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRW 212
+ D PYTFG+IGDLGQ+++S +TL HY S GQ+VLF+GDLSYADRY +D +RW
Sbjct: 121 QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRW 179
Query: 213 DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYA 272
D+WGRF E+S AYQPWIW+AGNHEIEF P + E PFK + +R PY AS+ST+P WY+
Sbjct: 180 DTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYS 239
Query: 273 IRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYME 332
I+RASAHIIVLSS+ Y + TPQ+ WL++EL+KV R +TPWLIVLMH PLY+S H+ME
Sbjct: 240 IKRASAHIIVLSSHIAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFME 299
Query: 333 GESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTV 392
GE+MR FE+WFV +VD +FAGHVHAYERS R+SNI Y T G PV D+SAPVY+T+
Sbjct: 300 GEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITDGLCTPVKDQSAPVYITI 359
Query: 393 GDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVV 452
GD GN + + PQP YSAFREAS+GH +IKNRTHA + WNRN DG V DSV
Sbjct: 360 GDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVW 419
Query: 453 FHNQYW 458
F N++W
Sbjct: 420 FFNRHW 425
|
Phaseolus vulgaris (taxid: 3885) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 479 | ||||||
| 296082127 | 484 | unnamed protein product [Vitis vinifera] | 0.987 | 0.977 | 0.799 | 0.0 | |
| 224143192 | 478 | predicted protein [Populus trichocarpa] | 0.962 | 0.964 | 0.819 | 0.0 | |
| 255548858 | 469 | Iron(III)-zinc(II) purple acid phosphata | 0.960 | 0.980 | 0.826 | 0.0 | |
| 359476175 | 488 | PREDICTED: bifunctional purple acid phos | 0.924 | 0.907 | 0.837 | 0.0 | |
| 224120334 | 483 | predicted protein [Populus trichocarpa] | 0.972 | 0.964 | 0.783 | 0.0 | |
| 255579857 | 488 | Iron(III)-zinc(II) purple acid phosphata | 0.983 | 0.965 | 0.766 | 0.0 | |
| 225446227 | 487 | PREDICTED: bifunctional purple acid phos | 0.956 | 0.940 | 0.777 | 0.0 | |
| 296084523 | 462 | unnamed protein product [Vitis vinifera] | 0.943 | 0.978 | 0.787 | 0.0 | |
| 357601492 | 476 | PAP26 [Gossypium hirsutum] | 0.964 | 0.970 | 0.771 | 0.0 | |
| 15242870 | 475 | purple acid phosphatase 26 [Arabidopsis | 0.972 | 0.981 | 0.748 | 0.0 |
| >gi|296082127|emb|CBI21132.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/474 (79%), Positives = 426/474 (89%), Gaps = 1/474 (0%)
Query: 1 MAVSFAKLVPLFQIMLYLTLLLS-LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHN 59
M V+ P F ++ L ++++ + +G+ARITS F R+EWPS DIPL N+ F IPKGHN
Sbjct: 1 MLVTSGGQFPSFHFLIILFIIVTTVRSGSARITSTFTRSEWPSTDIPLDNEAFAIPKGHN 60
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119
APQQV ITQGDYDGKAVII+WVT +E GS++V YG LEKKYD SAEG VTNYTF Y SG
Sbjct: 61 APQQVHITQGDYDGKAVIITWVTTDEPGSSKVLYGTLEKKYDFSAEGNVTNYTFSNYSSG 120
Query: 120 YIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLST 179
YIHHCLV LE DTKYYYKIGDG SSREFWFQTPPKI PD YTFGIIGDLGQTYNSLST
Sbjct: 121 YIHHCLVHGLEPDTKYYYKIGDGGSSREFWFQTPPKIDPDTSYTFGIIGDLGQTYNSLST 180
Query: 180 LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239
L+HYMQSG Q+VLF+GDLSYADRYE+NDVG+RWDSWGRF+E+SAAYQPWIW+AGNHE+E+
Sbjct: 181 LEHYMQSGAQTVLFVGDLSYADRYEFNDVGVRWDSWGRFVERSAAYQPWIWTAGNHEVEY 240
Query: 240 MPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWL 299
MPNMGEV+PFKSYLHR ATPY AS+S+NPLWYA+RRASAHIIVLSSYSP+VKYTPQW WL
Sbjct: 241 MPNMGEVLPFKSYLHRYATPYMASQSSNPLWYAVRRASAHIIVLSSYSPFVKYTPQWKWL 300
Query: 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359
REELK+VDREKTPWLIVLMH P+YSSNV HYMEGESMRAVFESWFVH++VD IFAGHVHA
Sbjct: 301 REELKRVDREKTPWLIVLMHAPMYSSNVAHYMEGESMRAVFESWFVHAKVDLIFAGHVHA 360
Query: 360 YERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREAS 419
YERSYRISNIHYN T+GDRYP+PDKSAPVY+TVGDGGNQEGLAGRF+DPQP YS+FREAS
Sbjct: 361 YERSYRISNIHYNITNGDRYPIPDKSAPVYITVGDGGNQEGLAGRFVDPQPEYSSFREAS 420
Query: 420 YGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQYWSNNLRRRKLKKNHLK 473
YGHSTLEIKNRTHAFYHWNRNDDG KV TDSVVF+NQYW+ NL+RR+LK+NH++
Sbjct: 421 YGHSTLEIKNRTHAFYHWNRNDDGKKVPTDSVVFYNQYWARNLQRRRLKRNHIR 474
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224143192|ref|XP_002324876.1| predicted protein [Populus trichocarpa] gi|222866310|gb|EEF03441.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/466 (81%), Positives = 423/466 (90%), Gaps = 5/466 (1%)
Query: 11 LFQIMLYLTLLLS-LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQG 69
LF+ ++ L L+LS + NG A +TS F+RT+WP+ADIPL N+VF IPKG+NAPQQV ITQG
Sbjct: 12 LFRFVIILVLVLSYVENGNAGLTSTFVRTQWPAADIPLDNEVFAIPKGYNAPQQVHITQG 71
Query: 70 DYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL 129
DYDGKAVIISWVTP+E GS V+YG E YD SAEGTVTNYTFYKYKSGYIHHCLVD L
Sbjct: 72 DYDGKAVIISWVTPDEPGSISVKYGTSENSYDFSAEGTVTNYTFYKYKSGYIHHCLVDGL 131
Query: 130 EYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQ 189
EYD+KYYYKIG+GDSSR FWFQTPP+I PDA YTFGIIGDLGQTYNSLSTL+HYM+SGGQ
Sbjct: 132 EYDSKYYYKIGEGDSSRVFWFQTPPEIDPDASYTFGIIGDLGQTYNSLSTLEHYMKSGGQ 191
Query: 190 SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF 249
SVLF GDLSYADRY+Y+DVGIRWDSWGRF+EQSAAYQPWIWSAGNHEIE+MP M EV+PF
Sbjct: 192 SVLFAGDLSYADRYQYDDVGIRWDSWGRFVEQSAAYQPWIWSAGNHEIEYMPEMEEVLPF 251
Query: 250 KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDRE 309
KS+LHR ATP+TASKSTNPLWYAIRRASAHIIVLSSYSP+VKYTPQW WLREELK+V+RE
Sbjct: 252 KSFLHRFATPHTASKSTNPLWYAIRRASAHIIVLSSYSPFVKYTPQWMWLREELKRVNRE 311
Query: 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNI 369
KTPWLIV+MHVP+Y+SN HYMEGESMRAVFESWFV S+VDFIFAGHVHAYERSYRISNI
Sbjct: 312 KTPWLIVVMHVPIYNSNAAHYMEGESMRAVFESWFVRSKVDFIFAGHVHAYERSYRISNI 371
Query: 370 HYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKN 429
HYN T+GDRYPVPDKSAPVYLTVGDGGNQEGL GRF+DPQP+YSAFREASYGHSTLEI+N
Sbjct: 372 HYNVTTGDRYPVPDKSAPVYLTVGDGGNQEGLVGRFVDPQPDYSAFREASYGHSTLEIRN 431
Query: 430 RTHAFYHWNRNDDGNKVTTDSVVFHNQYWSNNLRRRKLKKNHLKPR 475
RTHAFY WNRNDDG TTDSV+FHNQYW++N+ RR+ HLK R
Sbjct: 432 RTHAFYQWNRNDDGKPETTDSVIFHNQYWASNMHRRR----HLKAR 473
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255548858|ref|XP_002515485.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] gi|223545429|gb|EEF46934.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/461 (82%), Positives = 417/461 (90%), Gaps = 1/461 (0%)
Query: 11 LFQIMLYLTLLLS-LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQG 69
L Q ++ + +LL L NG A ITS F R++WPS DIPL N+VF IPKGHNAPQQV ITQG
Sbjct: 3 LLQFLVVIVVLLDFLENGNAGITSSFTRSQWPSTDIPLDNQVFAIPKGHNAPQQVHITQG 62
Query: 70 DYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL 129
DYDGKAVIISW+T +E GS V+YGKLEKKY+ SA+GTVTNYTFY Y SGYIHHCLVD L
Sbjct: 63 DYDGKAVIISWITADEPGSINVEYGKLEKKYEFSAQGTVTNYTFYNYTSGYIHHCLVDGL 122
Query: 130 EYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQ 189
EYDTKY+YKIG+GDSSREFWF+TPPKI PDAPYTFGIIGDLGQTYNS STL+HYM SGGQ
Sbjct: 123 EYDTKYFYKIGEGDSSREFWFRTPPKIDPDAPYTFGIIGDLGQTYNSFSTLEHYMHSGGQ 182
Query: 190 SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF 249
+VLF+GDLSYADRY+YNDVGIRWDSWGRF+E S AYQPWIWSAGNHEIEFMP+MGE++PF
Sbjct: 183 TVLFVGDLSYADRYQYNDVGIRWDSWGRFVESSTAYQPWIWSAGNHEIEFMPDMGEILPF 242
Query: 250 KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDRE 309
KSYLHR ATPY ASKS+NPLWYAIRRAS HIIVLSSYSPYVKYTPQW WLREE K+VDRE
Sbjct: 243 KSYLHRYATPYNASKSSNPLWYAIRRASTHIIVLSSYSPYVKYTPQWRWLREEFKRVDRE 302
Query: 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNI 369
KTPWLIVLMHVP+Y+SN HYMEGESMRAVFESWFVH +VDFIFAGHVHAYERSYRISNI
Sbjct: 303 KTPWLIVLMHVPIYNSNFGHYMEGESMRAVFESWFVHFKVDFIFAGHVHAYERSYRISNI 362
Query: 370 HYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKN 429
HYN TSGDRYPVPDKSAPVY+TVGDGGNQEGLAGRF DPQP+YSAFREASYGHSTLEI+N
Sbjct: 363 HYNVTSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFWDPQPDYSAFREASYGHSTLEIRN 422
Query: 430 RTHAFYHWNRNDDGNKVTTDSVVFHNQYWSNNLRRRKLKKN 470
RTHA YHWNRNDDG KV TDSV+FHNQYW++NL RR+ K+
Sbjct: 423 RTHAIYHWNRNDDGRKVPTDSVIFHNQYWASNLHRRRHLKD 463
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359476175|ref|XP_002285496.2| PREDICTED: bifunctional purple acid phosphatase 26 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/443 (83%), Positives = 408/443 (92%)
Query: 31 ITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNR 90
ITS F R+EWPS DIPL N+ F IPKGHNAPQQV ITQGDYDGKAVII+WVT +E GS++
Sbjct: 36 ITSTFTRSEWPSTDIPLDNEAFAIPKGHNAPQQVHITQGDYDGKAVIITWVTTDEPGSSK 95
Query: 91 VQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWF 150
V YG LEKKYD SAEG VTNYTF Y SGYIHHCLV LE DTKYYYKIGDG SSREFWF
Sbjct: 96 VLYGTLEKKYDFSAEGNVTNYTFSNYSSGYIHHCLVHGLEPDTKYYYKIGDGGSSREFWF 155
Query: 151 QTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGI 210
QTPPKI PD YTFGIIGDLGQTYNSLSTL+HYMQSG Q+VLF+GDLSYADRYE+NDVG+
Sbjct: 156 QTPPKIDPDTSYTFGIIGDLGQTYNSLSTLEHYMQSGAQTVLFVGDLSYADRYEFNDVGV 215
Query: 211 RWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLW 270
RWDSWGRF+E+SAAYQPWIW+AGNHE+E+MPNMGEV+PFKSYLHR ATPY AS+S+NPLW
Sbjct: 216 RWDSWGRFVERSAAYQPWIWTAGNHEVEYMPNMGEVLPFKSYLHRYATPYMASQSSNPLW 275
Query: 271 YAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY 330
YA+RRASAHIIVLSSYSP+VKYTPQW WLREELK+VDREKTPWLIVLMH P+YSSNV HY
Sbjct: 276 YAVRRASAHIIVLSSYSPFVKYTPQWKWLREELKRVDREKTPWLIVLMHAPMYSSNVAHY 335
Query: 331 MEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYL 390
MEGESMRAVFESWFVH++VD IFAGHVHAYERSYRISNIHYN T+GDRYP+PDKSAPVY+
Sbjct: 336 MEGESMRAVFESWFVHAKVDLIFAGHVHAYERSYRISNIHYNITNGDRYPIPDKSAPVYI 395
Query: 391 TVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDS 450
TVGDGGNQEGLAGRF+DPQP YS+FREASYGHSTLEIKNRTHAFYHWNRNDDG KV TDS
Sbjct: 396 TVGDGGNQEGLAGRFVDPQPEYSSFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVPTDS 455
Query: 451 VVFHNQYWSNNLRRRKLKKNHLK 473
VVF+NQYW+ NL+RR+LK+NH++
Sbjct: 456 VVFYNQYWARNLQRRRLKRNHIR 478
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120334|ref|XP_002331022.1| predicted protein [Populus trichocarpa] gi|222872952|gb|EEF10083.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/467 (78%), Positives = 414/467 (88%), Gaps = 1/467 (0%)
Query: 11 LFQIMLYLTLLLS-LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQG 69
L Q++L + L + NG A ITS FIR+EWPS DIPL N+VF +PKG+NAPQQV ITQG
Sbjct: 11 LLQLILVFVIFLGFVKNGNAGITSAFIRSEWPSIDIPLDNEVFAVPKGYNAPQQVHITQG 70
Query: 70 DYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL 129
DY+GKAVIISWVTP+E G+N+VQYG +KKYD +AEGTV NYTFY YKSGYIH CLVD L
Sbjct: 71 DYNGKAVIISWVTPDEPGTNKVQYGVSKKKYDFTAEGTVKNYTFYNYKSGYIHQCLVDGL 130
Query: 130 EYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQ 189
EY+TKYYYKIG GDSSREFWFQTPPKI+PD PY FGIIGDLGQTYNSLSTL+HYMQSG Q
Sbjct: 131 EYETKYYYKIGSGDSSREFWFQTPPKINPDTPYKFGIIGDLGQTYNSLSTLEHYMQSGAQ 190
Query: 190 SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF 249
+VLF+GDL+YADRY+YNDVGIRWDSWGRF+E+SAAYQPW+WSAGNHEIE+MP MGEVIPF
Sbjct: 191 AVLFVGDLAYADRYKYNDVGIRWDSWGRFVERSAAYQPWMWSAGNHEIEYMPYMGEVIPF 250
Query: 250 KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDRE 309
KSYL+R TP+ ASKS++P WYAIRRASAHIIVLSSYS +VKYTPQW WLREELK+VDRE
Sbjct: 251 KSYLNRYPTPHLASKSSSPFWYAIRRASAHIIVLSSYSSFVKYTPQWEWLREELKRVDRE 310
Query: 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNI 369
KTPWLIVLMH+P+Y+SN H+MEGESMRAVFE WFV +VD +FAGHVHAYERSYR+SNI
Sbjct: 311 KTPWLIVLMHIPIYNSNEAHFMEGESMRAVFEKWFVRYKVDVVFAGHVHAYERSYRVSNI 370
Query: 370 HYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKN 429
HYN +SGDR+P D+SAPVY+TVGDGGNQEGLAGRF DPQP+YSAFREASYGHSTLEIKN
Sbjct: 371 HYNVSSGDRFPAADESAPVYITVGDGGNQEGLAGRFRDPQPDYSAFREASYGHSTLEIKN 430
Query: 430 RTHAFYHWNRNDDGNKVTTDSVVFHNQYWSNNLRRRKLKKNHLKPRV 476
RTHA YHWNRNDDG KV TD+ V HNQYW NLRR+KLK++HL+ V
Sbjct: 431 RTHAIYHWNRNDDGKKVPTDAFVLHNQYWGRNLRRKKLKQHHLRTVV 477
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255579857|ref|XP_002530765.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] gi|223529681|gb|EEF31625.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/471 (76%), Positives = 410/471 (87%)
Query: 6 AKLVPLFQIMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVR 65
K++ I+ + LL +NN A ITS FIR+EWPS DIPL N+VF +PKG+NAPQQV
Sbjct: 5 TKMMQYMLILAFFVLLDFVNNANAGITSSFIRSEWPSIDIPLDNEVFAVPKGYNAPQQVH 64
Query: 66 ITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCL 125
ITQGDY+GKAVIISWVTP+E GS++VQYG E KYD AEGT NYTFY+YKSGYIH CL
Sbjct: 65 ITQGDYNGKAVIISWVTPDEPGSSKVQYGVSENKYDFIAEGTARNYTFYQYKSGYIHQCL 124
Query: 126 VDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQ 185
+DDLEYDTKYYYKIGDGDSSREF+FQTPP I+PD PY FGIIGDLGQTYNSLSTL+H++Q
Sbjct: 125 IDDLEYDTKYYYKIGDGDSSREFYFQTPPIINPDTPYKFGIIGDLGQTYNSLSTLEHFIQ 184
Query: 186 SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGE 245
S Q+VLF+GDLSYADRY+YNDVGIRWDSWGRF+E+S AY PW+WSAGNHEIE+MP MGE
Sbjct: 185 SKAQAVLFVGDLSYADRYQYNDVGIRWDSWGRFVEKSTAYLPWLWSAGNHEIEYMPYMGE 244
Query: 246 VIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKK 305
V PFKSYLHR TP+ ASKS++PLWYAIR ASAHIIVLSSYSP+VKYTPQW WL +ELK
Sbjct: 245 VTPFKSYLHRYPTPHLASKSSSPLWYAIRCASAHIIVLSSYSPFVKYTPQWEWLHQELKN 304
Query: 306 VDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYR 365
V+RE+TPWLIVLMHVPLY+SN H+MEGESMRAVFE WF+ +VD IFAGHVHAYERSYR
Sbjct: 305 VNREQTPWLIVLMHVPLYNSNEAHFMEGESMRAVFEKWFIRYKVDIIFAGHVHAYERSYR 364
Query: 366 ISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTL 425
ISNI YN +SG+RYP+ DKSAPVY+TVGDGGNQEGLA RF DPQP+YSAFREAS+GHSTL
Sbjct: 365 ISNIQYNVSSGERYPIADKSAPVYITVGDGGNQEGLAARFRDPQPDYSAFREASFGHSTL 424
Query: 426 EIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQYWSNNLRRRKLKKNHLKPRV 476
EIKNRTHAFY WNRNDDGNKV TD+ V HNQYW++N RRRKLKK+HL+ V
Sbjct: 425 EIKNRTHAFYQWNRNDDGNKVATDAFVLHNQYWASNPRRRKLKKHHLRSVV 475
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446227|ref|XP_002264680.1| PREDICTED: bifunctional purple acid phosphatase 26-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/458 (77%), Positives = 406/458 (88%)
Query: 15 MLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGK 74
+ + + + NG ARITS F+R+E+PS DIPL NKVF +PKG+NAPQQV ITQGDYDGK
Sbjct: 20 ITFFVFMCCVGNGNARITSAFVRSEFPSVDIPLDNKVFAVPKGYNAPQQVHITQGDYDGK 79
Query: 75 AVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134
AVI+SWVT +E G ++VQYG EK YD +AEGT TNYTFYKY+SGYIHHCLVD LE+DTK
Sbjct: 80 AVIVSWVTTDEPGPSKVQYGTSEKTYDYTAEGTTTNYTFYKYQSGYIHHCLVDGLEFDTK 139
Query: 135 YYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFL 194
YYYKIG G+SS+EFWFQTPP+I PDAPY FGIIGDLGQTYNSLSTL+HYM S GQ+VLFL
Sbjct: 140 YYYKIGSGNSSQEFWFQTPPEIDPDAPYIFGIIGDLGQTYNSLSTLEHYMHSEGQTVLFL 199
Query: 195 GDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLH 254
GDLSYADRY+YNDVG+RWD+WGRF+EQSAAYQPWIWSAGNHEIE+MP MGEV+PFKSYL+
Sbjct: 200 GDLSYADRYQYNDVGVRWDTWGRFVEQSAAYQPWIWSAGNHEIEYMPYMGEVLPFKSYLY 259
Query: 255 RIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWL 314
R TPY ASKS++PLWYAIRRASAHIIVLSSYSP+V YTPQW WL EE K+V+REKTPWL
Sbjct: 260 RFPTPYAASKSSSPLWYAIRRASAHIIVLSSYSPFVTYTPQWLWLAEEFKRVNREKTPWL 319
Query: 315 IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFT 374
IVLMHVP+Y+SN H+MEGESMRA FESWF+ ++VD +FAGHVHAYERSYRISNIHY+ +
Sbjct: 320 IVLMHVPIYNSNEAHFMEGESMRAAFESWFILNKVDIVFAGHVHAYERSYRISNIHYSVS 379
Query: 375 SGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAF 434
SGD YPVPD+SAPVY+TVGDGGNQEGLAGRF DPQP+YSAFREASYGHSTLEIKNRTHAF
Sbjct: 380 SGDPYPVPDESAPVYITVGDGGNQEGLAGRFRDPQPDYSAFREASYGHSTLEIKNRTHAF 439
Query: 435 YHWNRNDDGNKVTTDSVVFHNQYWSNNLRRRKLKKNHL 472
Y WNRN DG +V+TDS V HNQYW++ L RKLKK+ L
Sbjct: 440 YRWNRNSDGKQVSTDSFVLHNQYWASKLGSRKLKKHRL 477
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296084523|emb|CBI25544.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/452 (78%), Positives = 404/452 (89%)
Query: 21 LLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISW 80
+ + NG ARITS F+R+E+PS DIPL NKVF +PKG+NAPQQV ITQGDYDGKAVI+SW
Sbjct: 1 MCCVGNGNARITSAFVRSEFPSVDIPLDNKVFAVPKGYNAPQQVHITQGDYDGKAVIVSW 60
Query: 81 VTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG 140
VT +E G ++VQYG EK YD +AEGT TNYTFYKY+SGYIHHCLVD LE+DTKYYYKIG
Sbjct: 61 VTTDEPGPSKVQYGTSEKTYDYTAEGTTTNYTFYKYQSGYIHHCLVDGLEFDTKYYYKIG 120
Query: 141 DGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYA 200
G+SS+EFWFQTPP+I PDAPY FGIIGDLGQTYNSLSTL+HYM S GQ+VLFLGDLSYA
Sbjct: 121 SGNSSQEFWFQTPPEIDPDAPYIFGIIGDLGQTYNSLSTLEHYMHSEGQTVLFLGDLSYA 180
Query: 201 DRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPY 260
DRY+YNDVG+RWD+WGRF+EQSAAYQPWIWSAGNHEIE+MP MGEV+PFKSYL+R TPY
Sbjct: 181 DRYQYNDVGVRWDTWGRFVEQSAAYQPWIWSAGNHEIEYMPYMGEVLPFKSYLYRFPTPY 240
Query: 261 TASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHV 320
ASKS++PLWYAIRRASAHIIVLSSYSP+V YTPQW WL EE K+V+REKTPWLIVLMHV
Sbjct: 241 AASKSSSPLWYAIRRASAHIIVLSSYSPFVTYTPQWLWLAEEFKRVNREKTPWLIVLMHV 300
Query: 321 PLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYP 380
P+Y+SN H+MEGESMRA FESWF+ ++VD +FAGHVHAYERSYRISNIHY+ +SGD YP
Sbjct: 301 PIYNSNEAHFMEGESMRAAFESWFILNKVDIVFAGHVHAYERSYRISNIHYSVSSGDPYP 360
Query: 381 VPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRN 440
VPD+SAPVY+TVGDGGNQEGLAGRF DPQP+YSAFREASYGHSTLEIKNRTHAFY WNRN
Sbjct: 361 VPDESAPVYITVGDGGNQEGLAGRFRDPQPDYSAFREASYGHSTLEIKNRTHAFYRWNRN 420
Query: 441 DDGNKVTTDSVVFHNQYWSNNLRRRKLKKNHL 472
DG +V+TDS V HNQYW++ L RKLKK+ L
Sbjct: 421 SDGKQVSTDSFVLHNQYWASKLGSRKLKKHRL 452
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357601492|gb|AET86956.1| PAP26 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/463 (77%), Positives = 408/463 (88%), Gaps = 1/463 (0%)
Query: 11 LFQIMLYLTLLLS-LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQG 69
LFQ +L ++L+ +NN A ITSRFIR EWPS DIPL ++VF +PKG+NAPQQV ITQG
Sbjct: 5 LFQFILVPFVILNFVNNVNAGITSRFIREEWPSVDIPLDHEVFAVPKGYNAPQQVHITQG 64
Query: 70 DYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL 129
+YDG AVIISW+T +E GS++VQYGK +K Y+ SAEG +TNYTFYKY SGYIHH LVD L
Sbjct: 65 NYDGNAVIISWITFDEPGSSKVQYGKSDKNYEFSAEGKMTNYTFYKYNSGYIHHVLVDGL 124
Query: 130 EYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQ 189
EYDTKYYYK GDGDS+REFWFQTPP I PD PY FGIIGDLGQTYNSLSTL+HYM+SG Q
Sbjct: 125 EYDTKYYYKTGDGDSAREFWFQTPPMIGPDVPYKFGIIGDLGQTYNSLSTLEHYMESGAQ 184
Query: 190 SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF 249
SVLF+GDLSYADRY+YNDVGIRWDSWGRF+E+S AYQPWIWSAGNHEIE+MP M EV PF
Sbjct: 185 SVLFVGDLSYADRYKYNDVGIRWDSWGRFVEKSTAYQPWIWSAGNHEIEYMPYMNEVTPF 244
Query: 250 KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDRE 309
KSYLHR TPY ASKS++P+WYAIRRASAHII+LSSYSP+VKYTPQW WL EEL +VDR+
Sbjct: 245 KSYLHRYPTPYLASKSSSPMWYAIRRASAHIIMLSSYSPFVKYTPQWKWLEEELNRVDRK 304
Query: 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNI 369
KTPWLIVL+HVP+Y+SN H+MEGESMRAVFE WF+H +VD IFAGHVHAYERSYRISNI
Sbjct: 305 KTPWLIVLVHVPIYNSNEAHFMEGESMRAVFEEWFIHHKVDVIFAGHVHAYERSYRISNI 364
Query: 370 HYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKN 429
YN +SG+R+PVPD+SAPVY+TVGDGGNQEGLAG+F DPQP+YSAFREASYGHSTLEI N
Sbjct: 365 RYNVSSGERFPVPDESAPVYITVGDGGNQEGLAGKFRDPQPDYSAFREASYGHSTLEIMN 424
Query: 430 RTHAFYHWNRNDDGNKVTTDSVVFHNQYWSNNLRRRKLKKNHL 472
RTHA YHWNRNDDG KV DS V +NQYWS+N+R RKLK+++L
Sbjct: 425 RTHAVYHWNRNDDGKKVAIDSFVLNNQYWSSNVRERKLKRHYL 467
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15242870|ref|NP_198334.1| purple acid phosphatase 26 [Arabidopsis thaliana] gi|75249765|sp|Q949Y3.1|PPA26_ARATH RecName: Full=Bifunctional purple acid phosphatase 26; Includes: RecName: Full=Acid phosphatase; Includes: RecName: Full=Peroxidase; Flags: Precursor gi|15292757|gb|AAK92747.1| putative acid phosphatase [Arabidopsis thaliana] gi|20259673|gb|AAM14354.1| putative acid phosphatase [Arabidopsis thaliana] gi|332006529|gb|AED93912.1| purple acid phosphatase 26 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/466 (74%), Positives = 405/466 (86%)
Query: 11 LFQIMLYLTLLLSLNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGD 70
L I ++L+ +L L G + ITS FIR+EWP+ DIPL + VF +PKG+NAPQQV ITQGD
Sbjct: 4 LVIISVFLSSVLLLYRGESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVHITQGD 63
Query: 71 YDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130
YDGKAVIISWVTP+E GS++V YG ++ KY+ A+GT NYTFYKYKSG+IHHCLV DLE
Sbjct: 64 YDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCLVSDLE 123
Query: 131 YDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQS 190
+DTKYYYKI G+SSREFWF TPP +HPDA Y FGIIGD+GQT+NSLSTL+HYM+SG Q+
Sbjct: 124 HDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYMESGAQA 183
Query: 191 VLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFK 250
VLFLGDLSYADRY+YNDVG+RWDSWGRF+E+S AYQPW+WSAGNHE+++MP MGEV PF+
Sbjct: 184 VLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGEVTPFR 243
Query: 251 SYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREK 310
+YL R TPY ASKS++PLWYA+RRASAHIIVLSSYSP+VKYTPQW WL EEL +VDREK
Sbjct: 244 NYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVDREK 303
Query: 311 TPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIH 370
TPWLIVLMHVP+Y+SN H+MEGESMRA FE WFV +VD IFAGHVHAYERSYRISN+
Sbjct: 304 TPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRISNVR 363
Query: 371 YNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNR 430
YN +SGDRYPVPDKSAPVY+TVGDGGNQEGLAGRF +PQP+YSAFREASYGHSTL+IKNR
Sbjct: 364 YNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTLDIKNR 423
Query: 431 THAFYHWNRNDDGNKVTTDSVVFHNQYWSNNLRRRKLKKNHLKPRV 476
THA YHWNRNDDG KV TD V HNQYW N+RRRKLKK++++ V
Sbjct: 424 THAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIRSVV 469
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 479 | ||||||
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.901 | 0.909 | 0.775 | 4.7e-199 | |
| TAIR|locus:2005533 | 469 | PAP12 "AT2G27190" [Arabidopsis | 0.887 | 0.906 | 0.611 | 3e-149 | |
| UNIPROTKB|Q09131 | 464 | PAP "Purple acid phosphatase" | 0.889 | 0.918 | 0.599 | 1.7e-144 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.891 | 0.912 | 0.595 | 2.2e-144 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.893 | 0.918 | 0.597 | 5.9e-144 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.887 | 0.912 | 0.588 | 1.9e-140 | |
| TAIR|locus:2053149 | 441 | PAP11 "purple acid phosphatase | 0.603 | 0.655 | 0.621 | 1.9e-123 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.772 | 0.846 | 0.428 | 3.3e-79 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.772 | 0.846 | 0.429 | 4.3e-77 | |
| TAIR|locus:2075341 | 388 | PAP19 "purple acid phosphatase | 0.365 | 0.451 | 0.591 | 8.5e-77 |
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1927 (683.4 bits), Expect = 4.7e-199, P = 4.7e-199
Identities = 335/432 (77%), Positives = 382/432 (88%)
Query: 27 GTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNEL 86
G + ITS FIR+EWP+ DIPL + VF +PKG+NAPQQV ITQGDYDGKAVIISWVTP+E
Sbjct: 20 GESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVHITQGDYDGKAVIISWVTPDEP 79
Query: 87 GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSR 146
GS++V YG ++ KY+ A+GT NYTFYKYKSG+IHHCLV DLE+DTKYYYKI G+SSR
Sbjct: 80 GSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCLVSDLEHDTKYYYKIESGESSR 139
Query: 147 EFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYN 206
EFWF TPP +HPDA Y FGIIGD+GQT+NSLSTL+HYM+SG Q+VLFLGDLSYADRY+YN
Sbjct: 140 EFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYMESGAQAVLFLGDLSYADRYQYN 199
Query: 207 DVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKST 266
DVG+RWDSWGRF+E+S AYQPW+WSAGNHE+++MP MGEV PF++YL R TPY ASKS+
Sbjct: 200 DVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGEVTPFRNYLQRYTTPYLASKSS 259
Query: 267 NPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSN 326
+PLWYA+RRASAHIIVLSSYSP+VKYTPQW WL EEL +VDREKTPWLIVLMHVP+Y+SN
Sbjct: 260 SPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVDREKTPWLIVLMHVPIYNSN 319
Query: 327 VVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSA 386
H+MEGESMRA FE WFV +VD IFAGHVHAYERSYRISN+ YN +SGDRYPVPDKSA
Sbjct: 320 EAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRISNVRYNVSSGDRYPVPDKSA 379
Query: 387 PVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKV 446
PVY+TVGDGGNQEGLAGRF +PQP+YSAFREASYGHSTL+IKNRTHA YHWNRNDDG KV
Sbjct: 380 PVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTLDIKNRTHAIYHWNRNDDGKKV 439
Query: 447 TTDSVVFHNQYW 458
TD V HNQYW
Sbjct: 440 ATDEFVLHNQYW 451
|
|
| TAIR|locus:2005533 PAP12 "AT2G27190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
Identities = 263/430 (61%), Positives = 330/430 (76%)
Query: 32 TSRFIR-TEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNR 90
TS ++R ++ P D+PL + VF++P G N+PQQV +TQG+++G VIISWVTP + GS
Sbjct: 31 TSEYVRGSDLPD-DMPLDSDVFEVPPGPNSPQQVHVTQGNHEGNGVIISWVTPVKPGSKT 89
Query: 91 VQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWF 150
VQY +K AE TV Y F+ Y SGYIHHCL+DDLE+DTKYYY+IG G SR FWF
Sbjct: 90 VQYWCENEKSRKQAEATVNTYRFFNYTSGYIHHCLIDDLEFDTKYYYEIGSGKWSRRFWF 149
Query: 151 QTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHY-MQSG-GQSVLFLGDLSYADRYEYNDV 208
PPK PD PYTFG+IGDLGQTY+S STL HY M G GQ+VLF+GDLSYADRY +D
Sbjct: 150 FIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQAVLFVGDLSYADRYPNHDN 209
Query: 209 GIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNP 268
RWD+WGRF+E+S AYQPWIW+AGNHEI+F+P++GE+ PFK +++R TP+ AS S +P
Sbjct: 210 N-RWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFKPFMNRYHTPHKASGSISP 268
Query: 269 LWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV 328
LWY+I+RASA+IIV+S YS Y YTPQ+ WL +EL+ V+R +TPWLIVL+H P YSS V
Sbjct: 269 LWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTETPWLIVLVHSPFYSSYVH 328
Query: 329 HYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPV 388
HYMEGE++R ++E WFV +VD +FAGHVHAYERS R+SNI YN +G P+ D+SAP+
Sbjct: 329 HYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERSERVSNIAYNIVNGLCEPISDESAPI 388
Query: 389 YLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTT 448
Y+T+GDGGN EGL + PQP YSAFREAS+GH LEIKNRTHA++ WNRN DGN V
Sbjct: 389 YITIGDGGNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDGNAVAA 448
Query: 449 DSVVFHNQYW 458
DSV N++W
Sbjct: 449 DSVWLLNRFW 458
|
|
| UNIPROTKB|Q09131 PAP "Purple acid phosphatase" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
Score = 1412 (502.1 bits), Expect = 1.7e-144, P = 1.7e-144
Identities = 257/429 (59%), Positives = 317/429 (73%)
Query: 32 TSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRV 91
+S FIR + D+PL + VF +P G+NAPQQV ITQGD GKAVI+SWVT +E GS+ V
Sbjct: 25 SSPFIRKVEKTVDMPLDSDVFAVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGSSEV 84
Query: 92 QYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQ 151
Y AEG + Y F+ Y SG+IHH + +LEY TKYYY++G G+++R+FWF
Sbjct: 85 HYWSENSDKKKIAEGKLVTYRFFNYSSGFIHHTTIRNLEYKTKYYYEVGLGNTTRQFWFV 144
Query: 152 TPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSG--GQSVLFLGDLSYADRYEYNDVG 209
TPP+I PD PYTFG+IGDLGQ+++S TL HY + GQ+VLF+GDLSYAD Y +D
Sbjct: 145 TPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHD-N 203
Query: 210 IRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPL 269
IRWDSWGRF E+S AYQPWIW+AGNHE F P +GE +PFK Y HR PY AS+ST+P
Sbjct: 204 IRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHVPYKASQSTSPF 263
Query: 270 WYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVH 329
WY+I+RASAHIIVL+SYS Y KYTPQ+ WL +EL KV+R +TPWLIVLMH P Y+S H
Sbjct: 264 WYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYH 323
Query: 330 YMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVY 389
YMEGE+MR ++E WFV +VD +FAGHVHAYERS R+SN+ YN +G PV DKSAPVY
Sbjct: 324 YMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPVNDKSAPVY 383
Query: 390 LTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTD 449
+T+GDGG EGLA +PQP YSAFREAS+GH+ +I NRTHA Y W+RN DG V D
Sbjct: 384 ITIGDGGTLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDGVAVEAD 443
Query: 450 SVVFHNQYW 458
S+ N+YW
Sbjct: 444 SLWSFNRYW 452
|
|
| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1411 (501.8 bits), Expect = 2.2e-144, P = 2.2e-144
Identities = 256/430 (59%), Positives = 316/430 (73%)
Query: 31 ITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNR 90
ITSR++R + D+PL + VF +P G+NAPQQV ITQGD +GKAVI+SWVT GSN+
Sbjct: 29 ITSRYVRKLEATVDMPLDSDVFRVPCGYNAPQQVHITQGDVEGKAVIVSWVTQEAKGSNK 88
Query: 91 VQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWF 150
V Y K A G Y FY Y SG+IHHC + +LEYDTKYYY +G G + R+FWF
Sbjct: 89 VIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHHCPIRNLEYDTKYYYVLGVGQTERKFWF 148
Query: 151 QTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSG--GQSVLFLGDLSYADRYEYNDV 208
TPP+I PD PYTFG+IGDLGQ+Y+S TL HY + GQ+VLF+GD+SYAD Y +D
Sbjct: 149 FTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGDISYADTYPDHD- 207
Query: 209 GIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNP 268
RWDSWGRF E+S AYQPWIW+ GNHE++F P +GE PFK + HR TPY +S ST P
Sbjct: 208 NRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPFKPFTHRYRTPYRSSGSTEP 267
Query: 269 LWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV 328
WY+I+R A+IIVL+SYS Y KYTPQ+ WL EE KV+R +TPWLIVLMH P Y+S
Sbjct: 268 FWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRTETPWLIVLMHSPWYNSYDY 327
Query: 329 HYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPV 388
HYMEGE+MR ++E+WFV +VD +FAGHVHAYERS R+SNI YN +G PV D+SAPV
Sbjct: 328 HYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNIAYNVVNGICTPVKDQSAPV 387
Query: 389 YLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTT 448
Y+T+GDGGN EGLA + +PQP YSAFREAS+GH+ IKNRTHA Y W+RN DG V
Sbjct: 388 YITIGDGGNIEGLATKMTEPQPKYSAFREASFGHAIFSIKNRTHAHYGWHRNHDGYAVEG 447
Query: 449 DSVVFHNQYW 458
D + F+N++W
Sbjct: 448 DRMWFYNRFW 457
|
|
| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1407 (500.3 bits), Expect = 5.9e-144, P = 5.9e-144
Identities = 263/440 (59%), Positives = 327/440 (74%)
Query: 25 NNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTP- 83
N+GT TS F+RT PS ++ L + F P GHNAP+QV I QGDY+G+ +IISWVTP
Sbjct: 20 NSGT---TSNFVRTAQPSTEMSL--ETFPSPAGHNAPEQVHIVQGDYNGRGIIISWVTPL 74
Query: 84 NELGSNRVQYGKLE----KKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKI 139
N GSN V Y K K + ++Y FY Y SG++HH + LEYDTKY Y++
Sbjct: 75 NLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTSGFLHHATIKGLEYDTKYIYEV 134
Query: 140 GDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSG-GQSVLFLGDLS 198
G S R+F F +PPK+ PD PYTFGIIGDLGQT S TL HYM + GQ+VLF GDLS
Sbjct: 135 GTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLYHYMSNPKGQAVLFPGDLS 194
Query: 199 YADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIAT 258
YAD + +D +WDSWGRF+E AAYQ +I++AGNHEI+F+PN+GE FK Y+HR
Sbjct: 195 YADDHPNHDQR-KWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIGEPHAFKPYIHRYHN 253
Query: 259 PYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318
Y ASKS +PLWY+IRRASAHIIVLSSYS Y KYTPQ+ WL +ELKKV+RE+TPWLIV++
Sbjct: 254 AYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELKKVNREETPWLIVMV 313
Query: 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDR 378
H P Y+SN HYMEGESMRA+FESWFV+S+VD + +GHVH+YERS R+SNI YN T+G
Sbjct: 314 HSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVSNIKYNITNGLS 373
Query: 379 YPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWN 438
YPV D SAP+Y+T+GDGGN EG+A F DPQP+YSA+REAS+GH+ LEI NRTHA+Y W+
Sbjct: 374 YPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYREASFGHAVLEIYNRTHAYYTWH 433
Query: 439 RNDDGNKVTTDSVVFHNQYW 458
RN D V DS++ HN+Y+
Sbjct: 434 RNQDNEPVAADSIMLHNRYF 453
|
|
| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1374 (488.7 bits), Expect = 1.9e-140, P = 1.9e-140
Identities = 256/435 (58%), Positives = 321/435 (73%)
Query: 31 ITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTP-NELGSN 89
ITS+F+R PS ++ L F P G+N P+QV +TQGD+DG+ +I+SWVTP N GSN
Sbjct: 22 ITSKFVRQALPSIEMSLDT--FPSPGGYNTPEQVHLTQGDHDGRGMIVSWVTPLNLAGSN 79
Query: 90 RVQY-----GKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDS 144
V Y G K A + +Y FY Y SG++HH + LEYDTKY Y++G S
Sbjct: 80 VVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLHHATIKGLEYDTKYIYEVGTDKS 139
Query: 145 SREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSG-GQSVLFLGDLSYADRY 203
R+F F TPPKI PD PYTFGIIGDLGQTY S TL HYM + GQ+VLF GDLSYAD +
Sbjct: 140 VRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMSNPKGQAVLFAGDLSYADDH 199
Query: 204 EYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS 263
+D +WD+WGRF+E AAYQP+I++AGNHEI+F+PN+GE FK Y HR Y AS
Sbjct: 200 PNHDQR-KWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKAS 258
Query: 264 KSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLY 323
+ST+PLWY++RRASAHIIVLSSYS Y KYTPQ+ WL +ELK V+RE+TPWLIV++H P Y
Sbjct: 259 QSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVNREETPWLIVIVHSPWY 318
Query: 324 SSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPD 383
+SN HYMEGESMR +FESW V+S+VD + +GHVHAYERS RISNI YN T+G PV D
Sbjct: 319 NSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERISNIKYNITNGLSSPVKD 378
Query: 384 KSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDG 443
+AP+Y+T+GDGGN EG+A F+DPQP+YSA+REAS+GH+ LEI NRTHA Y W+RN D
Sbjct: 379 PNAPIYITIGDGGNIEGIANSFVDPQPSYSAYREASFGHAVLEIMNRTHAQYTWHRNQDN 438
Query: 444 NKVTTDSVVFHNQYW 458
V DS++ HN+++
Sbjct: 439 EPVAADSIMLHNRHF 453
|
|
| TAIR|locus:2053149 PAP11 "purple acid phosphatase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 985 (351.8 bits), Expect = 1.9e-123, Sum P(2) = 1.9e-123
Identities = 181/291 (62%), Positives = 225/291 (77%)
Query: 169 DLGQTYNSLSTLKHYMQSG-GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227
DLGQTY S TL +YM + GQ+VLF+GDLSYAD + +D +WDS+GRF+E SAAYQP
Sbjct: 145 DLGQTYASNQTLYNYMSNPKGQAVLFVGDLSYADDHPNHDQR-KWDSYGRFVEPSAAYQP 203
Query: 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS 287
W W+AGN+EI++ ++ E PFK Y +R PY AS+ST+PLWY+I+RAS +IIVLSSYS
Sbjct: 204 WSWAAGNYEIDYAQSISETQPFKPYKNRYHVPYKASQSTSPLWYSIKRASTYIIVLSSYS 263
Query: 288 PYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS 347
Y KYTPQ WL++ELKKV+R +T WLIVL+H P Y+SN HYMEGESMR FE WFV +
Sbjct: 264 AYDKYTPQNSWLQDELKKVNRSETSWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFVEN 323
Query: 348 RVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLD 407
+VD +FAGHVHAYERS RISNIHYN T G PV D++AP+Y+T+GDGGN EG+A F D
Sbjct: 324 KVDIVFAGHVHAYERSKRISNIHYNITDGMSTPVKDQNAPIYITIGDGGNIEGIANSFTD 383
Query: 408 PQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQYW 458
PQP+YSAFREAS+GH+ LEIKNRTHA Y W+RN + V DS+ +Y+
Sbjct: 384 PQPSYSAFREASFGHALLEIKNRTHAHYTWHRNKEDEAVIADSIWLKKRYY 434
|
|
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 170/397 (42%), Positives = 236/397 (59%)
Query: 56 KGHNAPQQVRIT-QGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFY 114
K + P+QV I+ GD K + ++WVT ++ + V+YG KY +G T+Y++
Sbjct: 42 KSSSVPEQVHISLAGD---KHMRVTWVTNDKSSPSFVEYGTSPGKYSYLGQGESTSYSYI 98
Query: 115 KYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTY 174
Y+SG IHH ++ LE DT YYY+ G G+ EF +TPP P TF + GDLGQT
Sbjct: 99 MYRSGKIHHTVIGPLEADTVYYYRCG-GEGP-EFHLKTPPA---QFPITFAVAGDLGQTG 153
Query: 175 NSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234
+ STL H Q L GDLSYAD ++ +WD++G ++ A+ +PW+ + GN
Sbjct: 154 WTKSTLDHIDQCKYAVHLLPGDLSYADYMQH-----KWDTFGELVQPLASVRPWMVTQGN 208
Query: 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTP 294
HE E +P + V F S+ R PY S S + L+Y+ A H I+L SY+ Y +Y+
Sbjct: 209 HEKESIPFI--VDEFVSFNSRWKMPYEESGSNSNLYYSFEVAGVHAIMLGSYTDYDRYSD 266
Query: 295 QWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFA 354
Q+ WL+ +L KVDRE+TPWLIVL HVP Y+SN H EG+ M A E S VD +F
Sbjct: 267 QYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEMEPLLYASGVDIVFT 326
Query: 355 GHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSA 414
GHVHAYER+ R++N G D PV++T+GDGGN+EGLA ++ DP P +S
Sbjct: 327 GHVHAYERTKRVNN-------GKS----DPCGPVHITIGDGGNREGLARKYKDPSPEWSV 375
Query: 415 FREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSV 451
FREAS+GH L++ N THA + W+RNDD +D V
Sbjct: 376 FREASFGHGELQMVNSTHALWTWHRNDDDEPTRSDEV 412
|
|
| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 170/396 (42%), Positives = 231/396 (58%)
Query: 61 PQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGY 120
PQQV I+ D V ++ T + ++ V+YGK KKYD G T+YT++ Y SG
Sbjct: 51 PQQVHISLAGKDHMRV--TYTTDDLNVASMVEYGKHPKKYDKKTAGESTSYTYFFYNSGK 108
Query: 121 IHHCLVDDLEYDTKYYYKIGD-GDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLST 179
IHH + L+ +TKYYY+ G GD EF F+TPP P F + GDLGQT ++ T
Sbjct: 109 IHHVKIGPLKPNTKYYYRCGGHGD---EFSFKTPPS---KFPIEFAVAGDLGQTDWTVRT 162
Query: 180 LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239
L + L GDLSYAD ++ WDS+GR +E A+ +PW+ + GNHEIE
Sbjct: 163 LDQIRKRDFDVFLLPGDLSYADTHQP-----LWDSFGRLLETLASTRPWMVTEGNHEIES 217
Query: 240 MPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWL 299
P + I FKSY R P+ S S + L+Y+ A H ++L SY+PY ++ Q+ WL
Sbjct: 218 FPT-NDHISFKSYNARWLMPHAESLSHSNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWL 276
Query: 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359
+ +L+KVDR+KTPWL+V+MH P YS+N HY EGE MR+ ES ++VD +FAGHVH
Sbjct: 277 QADLRKVDRKKTPWLVVVMHTPWYSTNKAHYGEGEKMRSALESLLYRAQVDVVFAGHVHT 336
Query: 360 YERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREAS 419
YER I YN + D P+Y+T+GDGGN+EGLA RF PQ S FRE+S
Sbjct: 337 YERFKPI----YNKKA-------DPCGPMYITIGDGGNREGLALRFKKPQSPLSEFRESS 385
Query: 420 YGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHN 455
+GH L I + A + W+RN+D D V F +
Sbjct: 386 FGHGRLRIIDHKRAHWSWHRNNDEMSSIADEVSFES 421
|
|
| TAIR|locus:2075341 PAP19 "purple acid phosphatase 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 574 (207.1 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 110/186 (59%), Positives = 135/186 (72%)
Query: 277 SAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESM 336
S + + SSYSP + L +ELKKV+R +TPWLIVL+H P Y+SN HYMEGESM
Sbjct: 203 SNELQLTSSYSPLTQ-------LMDELKKVNRSETPWLIVLVHAPWYNSNNYHYMEGESM 255
Query: 337 RAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGG 396
R FE WFV ++VD +FAGHVHAYERS RISNI YN T G PV D++APVY+T+GDGG
Sbjct: 256 RVTFEPWFVENKVDIVFAGHVHAYERSERISNIQYNITDGMSTPVKDQNAPVYITIGDGG 315
Query: 397 NQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGN----KVTTDSVV 452
N EG+A F+DPQP+YSAFREAS+GH+ LEIKNRTHA Y W+RN + V DS+
Sbjct: 316 NIEGIANNFIDPQPSYSAFREASFGHAILEIKNRTHAHYTWHRNKEDEFIPEAVIADSIW 375
Query: 453 FHNQYW 458
N+Y+
Sbjct: 376 LKNRYY 381
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q93WP4 | PEPP_ALLCE | 3, ., 1, ., 3, ., 6, 0 | 0.7006 | 0.9394 | 0.9355 | N/A | no |
| Q9SDZ9 | PPAF2_IPOBA | 3, ., 1, ., 3, ., 2 | 0.5852 | 0.9248 | 0.9526 | N/A | no |
| Q949Y3 | PPA26_ARATH | 1, ., 1, 1, ., 1, ., 7 | 0.7489 | 0.9728 | 0.9810 | yes | no |
| Q9SE00 | PPAF1_IPOBA | 3, ., 1, ., 3, ., 2 | 0.5581 | 0.9457 | 0.9577 | N/A | no |
| P80366 | PPAF_PHAVU | 3, ., 1, ., 3, ., 2 | 0.5704 | 0.8830 | 0.9791 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_LG_XVIII0431 | hypothetical protein (478 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 479 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 7e-97 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 4e-92 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 3e-22 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 3e-19 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 1e-07 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 2e-04 | |
| cd07396 | 267 | cd07396, MPP_Nbla03831, Homo sapiens Nbla03831 and | 0.002 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 0.004 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 293 bits (753), Expect = 7e-97
Identities = 119/294 (40%), Positives = 162/294 (55%), Gaps = 18/294 (6%)
Query: 158 PDAPYTFGIIGDLGQ-TYNSLSTLKHYMQSGG--QSVLFLGDLSYADRYEYNDVGIRWDS 214
D P+ F + GD+GQ T NS +TL H + G ++L +GDL+YAD + G RWD+
Sbjct: 1 DDTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYAD---GYNNGSRWDT 57
Query: 215 WGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIR 274
+ R IE A+Y P++ + GNHE ++ I R P++ S ST+ LWY+
Sbjct: 58 FMRQIEPLASYVPYMVTPGNHEADY-NFSFYKIKAFFP--RFRFPHSPSGSTSNLWYSFD 114
Query: 275 RASAHIIVLSSYSPYV---KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYM 331
H + LS+ + +PQ+ WL +L KVDR KTPW+IV+ H P+Y SN H
Sbjct: 115 VGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDD 174
Query: 332 --EGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVY 389
EGE MRA E F VD + +GHVHAYER+ + N GD P + PV+
Sbjct: 175 CIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV---GDCNPYSNPKGPVH 231
Query: 390 LTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDG 443
+ +G GGN EGL F P P +SAFRE+ YG L + N TH + W RNDDG
Sbjct: 232 IVIGAGGNDEGLDP-FSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDG 284
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 286 bits (732), Expect = 4e-92
Identities = 154/395 (38%), Positives = 228/395 (57%), Gaps = 26/395 (6%)
Query: 61 PQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYK-YKSG 119
P QV I+ D + ISW+T + + V YG + KY+ SA GT ++Y + Y+SG
Sbjct: 44 PDQVHISLVGPD--KMRISWITQDSI-PPSVVYGTVSGKYEGSANGTSSSYHYLLIYRSG 100
Query: 120 YIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLST 179
I+ ++ L+ +T YYYK G S++EF F+TPP P F + GDLG + + ST
Sbjct: 101 QINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWTKST 157
Query: 180 LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239
L+H + + GDLSYA+ Y+ WD++GR ++ A+ +PW+ + GNHE+E
Sbjct: 158 LEHVSKWDYDVFILPGDLSYANFYQ-----PLWDTFGRLVQPLASQRPWMVTHGNHELEK 212
Query: 240 MPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWL 299
+P + F +Y R P+ S ST+ L+Y+ HII+L SY+ + + Q+ WL
Sbjct: 213 IPILHPE-KFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWL 271
Query: 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGES--MRAVFESWFVHSRVDFIFAGHV 357
LKK+DR+ TPW++ ++H P Y+SN H E ES M+ E+ +RVD +FAGHV
Sbjct: 272 ENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHV 331
Query: 358 HAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFRE 417
HAYER R+ DK PVY+T+GDGGN+EGLA +++DP+P+ S FRE
Sbjct: 332 HAYERFDRVYQGKT-----------DKCGPVYITIGDGGNREGLATKYIDPKPDISLFRE 380
Query: 418 ASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVV 452
AS+GH L + + + W+RNDD V +DSV
Sbjct: 381 ASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVW 415
|
Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 93.7 bits (232), Expect = 3e-22
Identities = 41/202 (20%), Positives = 60/202 (29%), Gaps = 21/202 (10%)
Query: 163 TFGIIGDLGQTYNSLSTLKHYMQSGGQS----VLFLGDLSYADRYEYNDVGIRWDSWGRF 218
+IGDL + L L ++ G+ VLFLGDL + + F
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPPSLEVLALL------F 54
Query: 219 IEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASA 278
+ A P GNH+ + + + L + S T
Sbjct: 55 ALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSNGTV----------- 103
Query: 279 HIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRA 338
II LSS +L + I+L+H PL S
Sbjct: 104 EIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEE 163
Query: 339 VFESWFVHSRVDFIFAGHVHAY 360
E + VD + GH H
Sbjct: 164 ALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 81.0 bits (201), Expect = 3e-19
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 385 SAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDG 443
APV++ VG GN F DPQP +SAFR++ YG+ L + NRTH ++ + R+DDG
Sbjct: 1 KAPVHIVVGAAGNGLD---PFPDPQPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDDG 56
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 1e-07
Identities = 17/87 (19%), Positives = 23/87 (26%), Gaps = 7/87 (8%)
Query: 297 WWLREELKKVDREKTPWL-------IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRV 349
L L + P I+L H P Y + + V
Sbjct: 45 EVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGV 104
Query: 350 DFIFAGHVHAYERSYRISNIHYNFTSG 376
D + +GH H YER G
Sbjct: 105 DLVLSGHTHVYERREPDGGGTLYINPG 131
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 30/145 (20%), Positives = 47/145 (32%), Gaps = 28/145 (19%)
Query: 295 QWWWLREELKKVDREKTPWLIVLMHVPLYSS--NVVHYMEGESMRAVFESWFVHSRVDFI 352
Q WL + L W IV+ H P+YSS + + + + + +VD
Sbjct: 153 QLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHGPTSCLVDRLLPLLKK----YKVDAY 205
Query: 353 FAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNY 412
+GH H + H D S ++ G G +
Sbjct: 206 LSGHDHNLQ--------HI---------KDDGSGTSFVVSGAGSKARPSVKHIDKVPQFF 248
Query: 413 SAFREASYGHSTLEIKNR--THAFY 435
S F + G + LE+ T FY
Sbjct: 249 SGFTSSGGGFAYLELTKEELTVRFY 273
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163639 cd07396, MPP_Nbla03831, Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 294 PQWWWLREELKKVDREKTPWLIVLMHVPLY--SSNVVHYM-EGESMRAVFESWFVHSRVD 350
Q WLR EL++ D +I+ H PL+ S++ + E + ++ + + V
Sbjct: 163 EQLQWLRNELQEADANGEK-VIIFSHFPLHPESTSPHGLLWNHEEVLSILRA---YGCVK 218
Query: 351 FIFAGHVH--AYERSYRISNIHY 371
+GH H Y + + IH+
Sbjct: 219 ACISGHDHEGGYAQRH---GIHF 238
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 267 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.2 bits (91), Expect = 0.004
Identities = 41/214 (19%), Positives = 60/214 (28%), Gaps = 31/214 (14%)
Query: 191 VLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFK 250
++ GDL+ E R + + P I GNH+ GE
Sbjct: 37 LVVTGDLTNDGEPE----EYRRLKE--LLARLELPAPVIVVPGNHDA--RVVNGEA---- 84
Query: 251 SYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYT----PQWWWLREELKKV 306
+ + Y A +I L S P V Q WL E L
Sbjct: 85 -FSDQFFNRYAVLVG------ACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAA 137
Query: 307 DREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWF-VHSR-VDFIFAGHVH------ 358
++VL H PL S H V + +GH+H
Sbjct: 138 PERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLAAQTV 197
Query: 359 AYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTV 392
R+S++ V SA + T+
Sbjct: 198 YQLNGTRLSDLLVGAGPATCSQVFRGSATAFNTL 231
|
Length = 301 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 479 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 100.0 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.97 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.96 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.96 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.96 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.92 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.91 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.9 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.87 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.84 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.78 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.75 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.74 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.68 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.67 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.66 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.66 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.61 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.59 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.56 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.56 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.52 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.5 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.49 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.47 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.46 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.46 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.45 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.36 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.21 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.2 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.16 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.14 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.14 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.08 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.06 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.03 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.0 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.99 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.96 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.96 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.94 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.85 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.84 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.84 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.84 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.82 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.76 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.76 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.75 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.75 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.7 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.67 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.65 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.56 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.53 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.45 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.44 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.44 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.43 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.37 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.36 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.33 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.29 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.26 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.2 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.19 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.18 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.17 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.12 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.09 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 98.08 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.05 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.97 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.97 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.95 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.85 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.71 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.64 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.58 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.48 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.41 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.39 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.36 | |
| PHA02239 | 235 | putative protein phosphatase | 97.35 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.33 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.25 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 97.13 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.12 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.12 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.08 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 97.07 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.03 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.01 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 96.95 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.91 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 96.89 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.74 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.7 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 96.69 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.6 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.42 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.42 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.41 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 96.39 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.39 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 96.21 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.15 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.08 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 95.74 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 95.63 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 95.61 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 94.2 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 94.13 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 94.07 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 94.04 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 93.67 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 93.61 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 93.47 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 93.36 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 92.79 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 92.42 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 92.4 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 92.32 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 91.92 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 91.9 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 91.27 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 91.19 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 90.63 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 85.76 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 82.81 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-86 Score=656.39 Aligned_cols=424 Identities=39% Similarity=0.624 Sum_probs=375.3
Q ss_pred hhccCCCcccccccCCCCCcCccCcCccccCCCCCCCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCC---
Q 011680 24 LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKY--- 100 (479)
Q Consensus 24 ~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~p~~~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~--- 100 (479)
...|..+.++.+.|...++..++.+..++..|...++|+||||++++... +|+|+|.|.+. ..+.|+|+...++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~peQvhlS~~~~~~-~m~VswvT~~~-~~~~V~Yg~~~~~~~~~ 85 (452)
T KOG1378|consen 8 QSEINPKHTLHDINPLPGTLHLLSESEQLTFPSVVNSPEQVHLSFTDNLN-EMRVSWVTGDG-EENVVRYGEVKDKLDNS 85 (452)
T ss_pred eeeccCCCccccccccCcccccccccccccCcccCCCCCeEEEeccCCCC-cEEEEEeCCCC-CCceEEEeecCCCcccc
Confidence 34566888999999988888888888788889999999999999999885 99999999984 34899999876552
Q ss_pred --cceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCCCC-ccceEEEECCCCCCCCCCeEEEEEecCCCCCChH
Q 011680 101 --DSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGD-SSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSL 177 (479)
Q Consensus 101 --~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~g~-~~~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~ 177 (479)
...+.+.+..|...+++++++|+|++++|+|+|+||||||++. .|++++|+|+| +++.+.+|+++||+|+.....
T Consensus 86 ~~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~ 163 (452)
T KOG1378|consen 86 AARGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT 163 (452)
T ss_pred ccccceEEEecccccccceeeeEeeeeecCCCCCceEEEEeCCCCCcccceEeECCC--CccCceeEEEEcccccccccc
Confidence 2233444444544568999999999999999999999999843 47799999999 356899999999999998888
Q ss_pred HHHHHHHHh-CCCEEEEcCcccccCCCCCCchh-hhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCccccccccccc
Q 011680 178 STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVG-IRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHR 255 (479)
Q Consensus 178 ~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~-~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 255 (479)
.++....++ ++|+|||.||++|++++ . .+||+|++++|++++.+|+|++.||||+++.+.. .|.+|.+|
T Consensus 164 s~~~~~~~~~k~d~vlhiGDlsYa~~~-----~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~----~F~~y~~R 234 (452)
T KOG1378|consen 164 STLRNQEENLKPDAVLHIGDLSYAMGY-----SNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP----CFVPYSAR 234 (452)
T ss_pred chHhHHhcccCCcEEEEecchhhcCCC-----CccchHHHHhhhhhhhccCceEEecccccccCCCcc----ccccccee
Confidence 888888877 59999999999999984 4 6999999999999999999999999999876542 79999999
Q ss_pred ccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC--CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCC-CCCC
Q 011680 256 IATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY--VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV-HYME 332 (479)
Q Consensus 256 f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~--~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~-~~~~ 332 (479)
|.||.+++.+..++||||++|++|||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|.|+|++... ++.+
T Consensus 235 f~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~re 314 (452)
T KOG1378|consen 235 FNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYRE 314 (452)
T ss_pred eccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhcc
Confidence 9999998888888999999999999999999885 356999999999999999877999999999999998875 6666
Q ss_pred CH--HHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 011680 333 GE--SMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQP 410 (479)
Q Consensus 333 ~~--~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p 410 (479)
++ .+|..|++||.+++||++|.||+|+|||++|++|.++...++ +.++.+++||+||++|+||+.++.+. +..+||
T Consensus 315 G~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~-~~~~~d~~aPvyI~~G~~G~~e~~~~-~~~~~p 392 (452)
T KOG1378|consen 315 GEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWG-PVHLVDGMAPIYITVGDGGNHEHLDP-FSSPQP 392 (452)
T ss_pred CcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCC-cccccCCCCCEEEEEccCCcccccCc-ccCCCC
Confidence 65 889999999999999999999999999999999999888777 88999999999999999999998754 444899
Q ss_pred CCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEeCcccChh
Q 011680 411 NYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQYWSNNL 462 (479)
Q Consensus 411 ~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~~~~~~ 462 (479)
+||+||+++|||++|+++|+||+.|+|++|.|++.++.|+|||.|+++.+..
T Consensus 393 ~~Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~ 444 (452)
T KOG1378|consen 393 EWSAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVV 444 (452)
T ss_pred cccccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCcccc
Confidence 9999999999999999999999999999998888889999999999877654
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-81 Score=644.38 Aligned_cols=405 Identities=38% Similarity=0.669 Sum_probs=350.4
Q ss_pred ccCCCcccccccCCCCCcCccCcCccccCCCCCCCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCCcceEE
Q 011680 26 NGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAE 105 (479)
Q Consensus 26 ~~~~~~~~~~~r~~~~~~~~p~~~~~~~~p~~~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~~~~~~ 105 (479)
.|+.+.+..|+|++...+.+.+. ..++++..|+||||++++ + ++|+|+|.|.++ ..+.|+||++.+.+..++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~P~qvhls~~~-~-~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~ 85 (427)
T PLN02533 13 IVLAGNVLSYDRPGTRKNLVIHP----DNEDDPTHPDQVHISLVG-P-DKMRISWITQDS-IPPSVVYGTVSGKYEGSAN 85 (427)
T ss_pred hhhccCcccccCCCccccccccc----cCCCCCCCCceEEEEEcC-C-CeEEEEEECCCC-CCCEEEEecCCCCCcceEE
Confidence 44566889999986434333221 223567899999999998 3 699999999975 5689999999988899999
Q ss_pred eeEEEEee-eccccceEEEEEecCCCCCcEEEEEeCCCCccceEEEECCCCCCCCCCeEEEEEecCCCCCChHHHHHHHH
Q 011680 106 GTVTNYTF-YKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYM 184 (479)
Q Consensus 106 ~~~~~~~~-~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~g~~~~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~ 184 (479)
|++++|++ ..+.++++|+|+|+||+|+|+|+|||+.+..+++++|+|+|. ..+++|+++||+|.......+++++.
T Consensus 86 g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~---~~~~~f~v~GDlG~~~~~~~tl~~i~ 162 (427)
T PLN02533 86 GTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWTKSTLEHVS 162 (427)
T ss_pred EEEEEEeccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCC---CCCeEEEEEEeCCCCcccHHHHHHHH
Confidence 99888875 346789999999999999999999999755567999999985 46899999999998766677888888
Q ss_pred HhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCC
Q 011680 185 QSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASK 264 (479)
Q Consensus 185 ~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~ 264 (479)
+.+|||||++||++|++. . +.+|+.|+++++++.+.+|+|+++||||+...+.. ....|..|..+|.||..+.+
T Consensus 163 ~~~pD~vl~~GDl~y~~~----~-~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~-~~~~f~~y~~rf~mP~~~~g 236 (427)
T PLN02533 163 KWDYDVFILPGDLSYANF----Y-QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPIL-HPEKFTAYNARWRMPFEESG 236 (427)
T ss_pred hcCCCEEEEcCccccccc----h-HHHHHHHHHHhhhHhhcCceEEeCccccccccccc-cCcCccchhhcccCCccccC
Confidence 889999999999999876 3 78999999999999999999999999998654321 13467789999999987666
Q ss_pred CCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCC--CHHHHHHHHH
Q 011680 265 STNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYME--GESMRAVFES 342 (479)
Q Consensus 265 ~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~--~~~~r~~l~~ 342 (479)
...+.||+|++|++|||+||++.++....+|++||+++|+++++++++|+||++|+|+|+++..+..+ ...+++.|++
T Consensus 237 ~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~ 316 (427)
T PLN02533 237 STSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMET 316 (427)
T ss_pred CCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHH
Confidence 66789999999999999999998888889999999999999887788999999999999887654333 3467899999
Q ss_pred HHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccE
Q 011680 343 WFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGH 422 (479)
Q Consensus 343 l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~ 422 (479)
||.+++||++|+||+|.|||++|+++++ .+++||+||++|+||+.+++...+.+++|+||+||+.+|||
T Consensus 317 Ll~~~~VdlvlsGH~H~YeR~~p~~~~~-----------~~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~ 385 (427)
T PLN02533 317 LLYKARVDLVFAGHVHAYERFDRVYQGK-----------TDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGH 385 (427)
T ss_pred HHHHhCCcEEEecceecccccccccCCc-----------cCCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCE
Confidence 9999999999999999999999999876 46889999999999999987667778899999999999999
Q ss_pred EEEEEecCceEEEEEEEcCCCCeeeeeEEEEEeCc
Q 011680 423 STLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQY 457 (479)
Q Consensus 423 ~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~ 457 (479)
++|+|.|.||+.|+|++|+||+.++.|+|||+|.-
T Consensus 386 ~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~ 420 (427)
T PLN02533 386 GQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLL 420 (427)
T ss_pred EEEEEEcCCeEEEEEEecCCCCceeeeEEEEEecc
Confidence 99999999999999999999988899999999974
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-47 Score=380.06 Aligned_cols=285 Identities=42% Similarity=0.750 Sum_probs=228.0
Q ss_pred CCCeEEEEEecCCCC-CChHHHHHHHHH--hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCc
Q 011680 159 DAPYTFGIIGDLGQT-YNSLSTLKHYMQ--SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~-~~~~~~l~~~~~--~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 235 (479)
+.++||+++||+|.. .....+++++.+ .+|||||++||++|+++.. . ..+|+.|++.++++.+.+|+++++|||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~--~-~~~~~~~~~~~~~~~~~~P~~~~~GNH 78 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN--N-GSRWDTFMRQIEPLASYVPYMVTPGNH 78 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc--c-chhHHHHHHHHHHHHhcCCcEEcCccc
Confidence 457999999999873 456788999888 4999999999999987621 1 378999999999998899999999999
Q ss_pred ccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC---CCCHHHHHHHHHHHhhcccCCCC
Q 011680 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY---VKYTPQWWWLREELKKVDREKTP 312 (479)
Q Consensus 236 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~---~~~~~Q~~WL~~~L~~~~~~~~~ 312 (479)
|+....... ....+..++.++........+.||+|++|+++||+|||+... ....+|++||+++|+++++.+.+
T Consensus 79 D~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~ 155 (294)
T cd00839 79 EADYNFSFY---KIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTP 155 (294)
T ss_pred ccccCCCCc---ccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCC
Confidence 985432110 011111123334333344467899999999999999998765 45799999999999987655678
Q ss_pred eEEEEecccccccCCCCCC--CCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEE
Q 011680 313 WLIVLMHVPLYSSNVVHYM--EGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYL 390 (479)
Q Consensus 313 w~IV~~H~P~~~~~~~~~~--~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi 390 (479)
|+||++|+|+++....... .....++.|+++|.+++|+++|+||+|.|+|++|+++++.. +.+..+.+++|++||
T Consensus 156 ~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~---~~~~~~~~~~g~~yi 232 (294)
T cd00839 156 WIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV---GDCNPYSNPKGPVHI 232 (294)
T ss_pred eEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec---cccccccCCCccEEE
Confidence 9999999999987654332 24577899999999999999999999999999999987742 445556789999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEe
Q 011680 391 TVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHN 455 (479)
Q Consensus 391 ~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 455 (479)
++|+||+.++...... +.++|++++...+||++|++.++|+|+++|+++.+|+ +.|+|+|.|
T Consensus 233 v~G~~G~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~--v~D~f~i~k 294 (294)
T cd00839 233 VIGAGGNDEGLDPFSA-PPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGV--VIDSFWIIK 294 (294)
T ss_pred EECCCccccCcCcccC-CCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCe--EEEEEEEeC
Confidence 9999999886432221 2357999999999999999999889999999999998 999999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=292.54 Aligned_cols=260 Identities=15% Similarity=0.237 Sum_probs=191.5
Q ss_pred CCCCeEEEEEecCCCCCChHHHHHH----HHHh-CCCEEEEcCcccccCCCCCCchhhhHHH-HHHHHHHHh--hcCCeE
Q 011680 158 PDAPYTFGIIGDLGQTYNSLSTLKH----YMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQSA--AYQPWI 229 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~~~~~l~~----~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~-~~~~~~~l~--~~~P~~ 229 (479)
-...++|+++||+|.+...+..+++ +.++ ++||||.+||+. .++..+.+ +.+|++ |.+...... ..+||+
T Consensus 23 ~~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~-Dp~f~~~FE~vY~~~s~~L~~Pwy 100 (394)
T PTZ00422 23 VKAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLN-DPKWKHCFENVYSEESGDMQIPFF 100 (394)
T ss_pred cCCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCcc-chhHHhhHhhhccCcchhhCCCeE
Confidence 3568999999999976555544433 3333 899999999998 55555555 777876 444444333 478999
Q ss_pred EcCCCcccccCCCCCccc--------------cc---ccccccccCCcCCCCCCCCceEEE----Ec-------------
Q 011680 230 WSAGNHEIEFMPNMGEVI--------------PF---KSYLHRIATPYTASKSTNPLWYAI----RR------------- 275 (479)
Q Consensus 230 ~v~GNHD~~~~~~~~~~~--------------~~---~~~~~~f~~P~~~~~~~~~~yysf----~~------------- 275 (479)
+|+||||+..+....-.. .+ .....||.||. .||.+ ..
T Consensus 101 ~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f~~~~~~~~~~~~~~~ 172 (394)
T PTZ00422 101 TVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHFTDTSGPSLLKSGHKD 172 (394)
T ss_pred EeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeeeecccccccccccCCC
Confidence 999999985443221000 00 01235888884 57754 21
Q ss_pred CeEEEEEeecCCC-----CCC-CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCC
Q 011680 276 ASAHIIVLSSYSP-----YVK-YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRV 349 (479)
Q Consensus 276 g~v~fi~Lds~~~-----~~~-~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~V 349 (479)
..+.||+|||... +.. .+.|++||+++|+.+ ++.++|+||+.|||+|+++.++ ....++..|+|||++|+|
T Consensus 173 ~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~hg--~~~~L~~~L~PLL~ky~V 249 (394)
T PTZ00422 173 MSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSSK--GDSYLSYYLLPLLKDAQV 249 (394)
T ss_pred CEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCCC--CCHHHHHHHHHHHHHcCc
Confidence 2389999999632 222 478999999999754 3567899999999999988653 356789999999999999
Q ss_pred cEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEec
Q 011680 350 DFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKN 429 (479)
Q Consensus 350 dlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~ 429 (479)
|++|+||+|+||+.. .+++.||++|+||...+.. . ..++++.|....+||+.+++ +
T Consensus 250 dlYisGHDH~lq~i~-------------------~~gt~yIvSGaGs~~~~~~---~-~~~~~s~F~~~~~GF~~~~l-~ 305 (394)
T PTZ00422 250 DLYISGYDRNMEVLT-------------------DEGTAHINCGSGGNSGRKS---I-MKNSKSLFYSEDIGFCIHEL-N 305 (394)
T ss_pred CEEEEccccceEEec-------------------CCCceEEEeCccccccCCC---C-CCCCCcceecCCCCEEEEEE-e
Confidence 999999999999973 3478999999999876431 1 22457889888999999998 5
Q ss_pred CceEEEEEEEcCCCCeeeeeEEEEEeC
Q 011680 430 RTHAFYHWNRNDDGNKVTTDSVVFHNQ 456 (479)
Q Consensus 430 ~~~~~~~~~~~~dg~~~~~D~~~i~~~ 456 (479)
.+.+.++|+.+.+|+ +.+++.+.++
T Consensus 306 ~~~l~~~fid~~~Gk--vL~~~~~~~~ 330 (394)
T PTZ00422 306 AEGMVTKFVSGNTGE--VLYTHKQPLK 330 (394)
T ss_pred cCEEEEEEEeCCCCc--EEEEeeeccc
Confidence 668999998667999 8999988765
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=275.56 Aligned_cols=247 Identities=21% Similarity=0.328 Sum_probs=176.4
Q ss_pred eEEEEEecCCCC-CChHH----HHHHHHH-hCCCEEEEcCcccccCCCCCCchhhhHH-HHHHHHHHHhhcCCeEEcCCC
Q 011680 162 YTFGIIGDLGQT-YNSLS----TLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWD-SWGRFIEQSAAYQPWIWSAGN 234 (479)
Q Consensus 162 ~~f~~~gD~~~~-~~~~~----~l~~~~~-~~pD~vl~~GDl~y~~~~~~~~~~~~~~-~~~~~~~~l~~~~P~~~v~GN 234 (479)
++|+++||+|.. ...+. .+.++.+ .+|||||++||++|+++....+ ...|. .|.+.+..+...+|+++++||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~-~~~~~~~~~~~~~~~~~~~P~~~v~GN 79 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVD-DPRFETTFEDVYSAPSLQVPWYLVLGN 79 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCc-chHHHHHHHHHccchhhcCCeEEecCC
Confidence 489999999986 23222 2333333 3999999999999987743333 34443 355555444457899999999
Q ss_pred cccccCCCCCccccccc--ccccccCCcCCCCCCCCceEEEEcC------eEEEEEeecCCCC---------------CC
Q 011680 235 HEIEFMPNMGEVIPFKS--YLHRIATPYTASKSTNPLWYAIRRA------SAHIIVLSSYSPY---------------VK 291 (479)
Q Consensus 235 HD~~~~~~~~~~~~~~~--~~~~f~~P~~~~~~~~~~yysf~~g------~v~fi~Lds~~~~---------------~~ 291 (479)
||+...... ...+.. +..+|.+| ..||+|+++ +++||+|||.... ..
T Consensus 80 HD~~~~~~~--~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T cd07378 80 HDYSGNVSA--QIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKL 149 (277)
T ss_pred cccCCCchh--eeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhh
Confidence 997532110 111111 13334444 469999998 7999999997531 12
Q ss_pred CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCee
Q 011680 292 YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHY 371 (479)
Q Consensus 292 ~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~ 371 (479)
+.+|++||+++|+++ ..+|+||++|||+++..... .....++.|++++.+++|+++|+||+|.+++..+
T Consensus 150 ~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~------ 218 (277)
T cd07378 150 AEEQLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKD------ 218 (277)
T ss_pred HHHHHHHHHHHHHhc---CCCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeeec------
Confidence 589999999999985 34899999999999765432 1356789999999999999999999999998752
Q ss_pred cccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCC
Q 011680 372 NFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDG 443 (479)
Q Consensus 372 ~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg 443 (479)
+..++.||++|+||...+.........|.|+.++...+||++|+|.++ ++.++|+ +.||
T Consensus 219 -----------~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~~-~l~~~~~-~~~g 277 (277)
T cd07378 219 -----------DGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTKE-ELTVRFY-DADG 277 (277)
T ss_pred -----------CCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEecC-EEEEEEE-CCCC
Confidence 246899999999998765432222223457888888999999999654 7999987 4565
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=265.35 Aligned_cols=289 Identities=20% Similarity=0.270 Sum_probs=155.9
Q ss_pred ecCCCCCcEEEEEEcCCC--------CCccEEEEEecCCCCc--ceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 68 QGDYDGKAVIISWVTPNE--------LGSNRVQYGKLEKKYD--SSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 68 ~~~~~~~~~~i~W~t~~~--------~~~~~V~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
..|||..+.+|.|++..+ ..+..|+|..+.+... ....+...+ ....+++++++|+||+|+|+|+|
T Consensus 4 asGdp~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~----~~~~d~t~~v~v~gL~p~t~Y~Y 79 (453)
T PF09423_consen 4 ASGDPTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTT----TAERDFTVKVDVTGLQPGTRYYY 79 (453)
T ss_dssp EEE---SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EEEE
T ss_pred cccCCCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceec----ccCCCeEeecccCCCCCCceEEE
Confidence 346777899999999875 2245666666554332 233333322 23578999999999999999999
Q ss_pred EeCC---CCccceEEEECCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHHh-CCCEEEEcCcccccCCC---C------
Q 011680 138 KIGD---GDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS-GGQSVLFLGDLSYADRY---E------ 204 (479)
Q Consensus 138 ~v~~---g~~~~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~-~pD~vl~~GDl~y~~~~---~------ 204 (479)
|+.. +..+++++|+|+|.. ....+||+++||.+.......++.++.+. +|||+||+||++|++.. .
T Consensus 80 ~~~~~~~~~~s~~g~~rT~p~~-~~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~ 158 (453)
T PF09423_consen 80 RFVVDGGGQTSPVGRFRTAPDG-DPDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRP 158 (453)
T ss_dssp EEEE--TTEE---EEEE--TT------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---
T ss_pred EEEEecCCCCCCceEEEcCCCC-CCCceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCcccccccccc
Confidence 9986 356789999999753 23569999999998866678889999984 99999999999999852 0
Q ss_pred ----------C---CchhhhHHHH--HHHHHHHhhcCCeEEcCCCcccccCCCC-Ccc------ccc-----cccccccc
Q 011680 205 ----------Y---NDVGIRWDSW--GRFIEQSAAYQPWIWSAGNHEIEFMPNM-GEV------IPF-----KSYLHRIA 257 (479)
Q Consensus 205 ----------~---~~~~~~~~~~--~~~~~~l~~~~P~~~v~GNHD~~~~~~~-~~~------~~~-----~~~~~~f~ 257 (479)
. .+|..+|..+ ...++.+.+.+|++.+|++||+..+... +.. ..+ .+++.+|.
T Consensus 159 ~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e 238 (453)
T PF09423_consen 159 IGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFE 238 (453)
T ss_dssp S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHh
Confidence 0 0123334433 2446777889999999999999543221 100 011 12222222
Q ss_pred -CCcCCC---CCCCCceEEEEcCe-EEEEEeecCCCCC---------------------CCHHHHHHHHHHHhhcccCCC
Q 011680 258 -TPYTAS---KSTNPLWYAIRRAS-AHIIVLSSYSPYV---------------------KYTPQWWWLREELKKVDREKT 311 (479)
Q Consensus 258 -~P~~~~---~~~~~~yysf~~g~-v~fi~Lds~~~~~---------------------~~~~Q~~WL~~~L~~~~~~~~ 311 (479)
+|.... ......|++|.+|+ +.|++||+..... .|.+|++||++.|++ +.+
T Consensus 239 ~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a 315 (453)
T PF09423_consen 239 YQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQA 315 (453)
T ss_dssp HS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----S
T ss_pred hcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc---CCC
Confidence 444321 22346799999999 9999999964311 268999999999998 568
Q ss_pred CeEEEEecccccccCC-----------CCCCCCHHHHHHHHHHHHHcCCc--EEEEcccccceeee
Q 011680 312 PWLIVLMHVPLYSSNV-----------VHYMEGESMRAVFESWFVHSRVD--FIFAGHVHAYERSY 364 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~-----------~~~~~~~~~r~~l~~l~~~~~Vd--lvlsGH~H~yer~~ 364 (479)
+|+||+.-.|+..... ..+......|+.|..+|.+.++. ++|+|.+|......
T Consensus 316 ~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~ 381 (453)
T PF09423_consen 316 TWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASR 381 (453)
T ss_dssp SEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEE
T ss_pred cEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeee
Confidence 9999999888744321 12233467789999999988875 78999999877554
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=241.72 Aligned_cols=295 Identities=17% Similarity=0.172 Sum_probs=210.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC-------CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE-------LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~-------~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.|..-|-...|||.....|.|++.++ +.+..+||++.++..+.+..|+..+. ...++++|+.++||+|+
T Consensus 36 rpaF~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a~----p~~dhtv~v~~~gL~P~ 111 (522)
T COG3540 36 RPAFTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIAS----PELDHTVHVDLRGLSPD 111 (522)
T ss_pred CCccccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccCC----cccCceEEEeccCCCCC
Confidence 34233334457778899999998762 34556777777765554444444332 25689999999999999
Q ss_pred cEEEEEeCCC-CccceEEEECCCCCCCC-CCeEEEEEecCCCCCChHHHHHHHHHhCCCEEEEcCcccccCCCC------
Q 011680 133 TKYYYKIGDG-DSSREFWFQTPPKIHPD-APYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYE------ 204 (479)
Q Consensus 133 t~Y~Y~v~~g-~~~~~~~F~T~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~~~~~~pD~vl~~GDl~y~~~~~------ 204 (479)
+.|+||+..| ..+++++|||+|+++.. .-++|+..+|.|...+...++++|.+.+|||+||+||++|+++.-
T Consensus 112 ~~yfYRf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~ 191 (522)
T COG3540 112 QDYFYRFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSL 191 (522)
T ss_pred ceEEEEEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCccccccc
Confidence 9999999874 34679999999997655 335677777777777778889999999999999999999998731
Q ss_pred ----C--------------CchhhhHHHH--HHHHHHHhhcCCeEEcCCCcccccCCCCCcc--------ccc-----cc
Q 011680 205 ----Y--------------NDVGIRWDSW--GRFIEQSAAYQPWIWSAGNHEIEFMPNMGEV--------IPF-----KS 251 (479)
Q Consensus 205 ----~--------------~~~~~~~~~~--~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~--------~~~-----~~ 251 (479)
. .+|+.+|..+ ...++...+..||++.|++||+.++...+.. ..+ .+
T Consensus 192 ~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A 271 (522)
T COG3540 192 NSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAA 271 (522)
T ss_pred ccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHH
Confidence 1 1245556554 3457777889999999999999765321100 111 13
Q ss_pred cccccc-CCcCCCCCC--CCceEEEEcCe-EEEEEeecCCCC------C----------------CCHHHHHHHHHHHhh
Q 011680 252 YLHRIA-TPYTASKST--NPLWYAIRRAS-AHIIVLSSYSPY------V----------------KYTPQWWWLREELKK 305 (479)
Q Consensus 252 ~~~~f~-~P~~~~~~~--~~~yysf~~g~-v~fi~Lds~~~~------~----------------~~~~Q~~WL~~~L~~ 305 (479)
++.++. ||.+..... ...|.+|.||+ +.|.+||+..+. + .|..|.+||++.|.+
T Consensus 272 ~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~ 351 (522)
T COG3540 272 RQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA 351 (522)
T ss_pred HHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh
Confidence 333332 887654322 57899999999 789999986532 1 268999999999999
Q ss_pred cccCCCCeEEEEecccccc----cCC--C-------CCCCCHHHHHHHHHHHHHcCCc--EEEEcccccce
Q 011680 306 VDREKTPWLIVLMHVPLYS----SNV--V-------HYMEGESMRAVFESWFVHSRVD--FIFAGHVHAYE 361 (479)
Q Consensus 306 ~~~~~~~w~IV~~H~P~~~----~~~--~-------~~~~~~~~r~~l~~l~~~~~Vd--lvlsGH~H~ye 361 (479)
+++.|+||..-.|+-. ... . .+.....-|+.|..++...++. +||+|.+|...
T Consensus 352 ---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 352 ---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred ---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHH
Confidence 7899999999988721 110 0 0111234488999999988865 89999999643
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-28 Score=221.15 Aligned_cols=270 Identities=17% Similarity=0.254 Sum_probs=175.3
Q ss_pred EEECCCCCCCCCCeEEEEEecCCCCCChHH-----HHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHH-HHHHHHH
Q 011680 149 WFQTPPKIHPDAPYTFGIIGDLGQTYNSLS-----TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQ 221 (479)
Q Consensus 149 ~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~-----~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~-~~~~~~~ 221 (479)
++.-|+. ++..++|+++||+|.....+. .+..+.+. +.||||.+||++|.++....+ +.+++. |......
T Consensus 33 ~l~~p~~--~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~-Dp~Fq~sF~nIYT~ 109 (336)
T KOG2679|consen 33 RLYDPAK--SDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSEN-DPRFQDSFENIYTA 109 (336)
T ss_pred hhcCCCC--CCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCC-ChhHHhhhhhcccC
Confidence 4555554 568899999999986544322 12334444 999999999999999865544 555443 3232221
Q ss_pred HhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEE----EE--cCeEEEEEeecCCC-------
Q 011680 222 SAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYA----IR--RASAHIIVLSSYSP------- 288 (479)
Q Consensus 222 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yys----f~--~g~v~fi~Lds~~~------- 288 (479)
-.-+.||+.+.||||+..+-...-..-+.....||..|.. ||. .+ .-++.++|+|+...
T Consensus 110 pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs--------f~~~ae~ve~f~v~~~~f~~d~~~~~~~~~yd 181 (336)
T KOG2679|consen 110 PSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRS--------FYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYD 181 (336)
T ss_pred cccccchhhhccCccccCchhhhhhHHHHhhccceecccH--------Hhhcceeeeeeccccccchhhheecccccccc
Confidence 1225699999999998654322111113444566765531 221 01 11234445444221
Q ss_pred CCC-------CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 289 YVK-------YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 289 ~~~-------~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
+.. ...++.||+..|++ +.++|+||+.|||+.+.+.+ +...++++.|.|+|++++||++++||+|+.|
T Consensus 182 w~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~H--G~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQ 256 (336)
T KOG2679|consen 182 WRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHH--GPTKELEKQLLPILEANGVDLYINGHDHCLQ 256 (336)
T ss_pred cccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhcc--CChHHHHHHHHHHHHhcCCcEEEecchhhhh
Confidence 111 26788999999999 78999999999999987654 4477899999999999999999999999999
Q ss_pred eeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCC-CCCCCCceeeeCcccEEEEEEecCceEEEEEEEc
Q 011680 362 RSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFL-DPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRN 440 (479)
Q Consensus 362 r~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~-~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~ 440 (479)
... ....++-|+++|+|...-. ..... ...|+.-.|.-..-||+-+++ .+..+++.|+.
T Consensus 257 his-----------------~~e~~iqf~tSGagSkaw~-g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~e~~vvfyD- 316 (336)
T KOG2679|consen 257 HIS-----------------SPESGIQFVTSGAGSKAWR-GTDHNPEVNPKELKFYYDGQGFMSVEI-SHSEARVVFYD- 316 (336)
T ss_pred hcc-----------------CCCCCeeEEeeCCcccccC-CCccCCccChhheEEeeCCCceEEEEE-ecceeEEEEEe-
Confidence 863 1245666777776544321 11111 123445566666679999999 55678888876
Q ss_pred CCCCeeeeeEEEEEeC
Q 011680 441 DDGNKVTTDSVVFHNQ 456 (479)
Q Consensus 441 ~dg~~~~~D~~~i~~~ 456 (479)
..|+ +..+....++
T Consensus 317 ~~G~--~Lhk~~t~kr 330 (336)
T KOG2679|consen 317 VSGK--VLHKWSTSKR 330 (336)
T ss_pred ccCc--eEEEeecccc
Confidence 5788 5665554443
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-27 Score=230.95 Aligned_cols=229 Identities=17% Similarity=0.198 Sum_probs=160.4
Q ss_pred CCeEEEEEecCCCCCC--h---------------HHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHH
Q 011680 160 APYTFGIIGDLGQTYN--S---------------LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIE 220 (479)
Q Consensus 160 ~~~~f~~~gD~~~~~~--~---------------~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 220 (479)
.+++|+++||+|.+.. . ...++.+.+. +||+||++||+++.+...... ..+|+.+.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~-~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELR-ERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhH-HHHHHHHHHHHh
Confidence 5799999999998731 1 1233445555 899999999999876521101 234566666666
Q ss_pred HHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCC------CCHH
Q 011680 221 QSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYV------KYTP 294 (479)
Q Consensus 221 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~------~~~~ 294 (479)
.+...+|+++++||||+...+. ...+..|...| +..||+|++|+++||+|||..... ...+
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~---~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~ 148 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT---EESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQA 148 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC---hhHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHH
Confidence 6555789999999999743221 11222333333 235899999999999999965321 2478
Q ss_pred HHHHHHHHHhhcccCCCCeEEEEecccccccCCCCC----CCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCe
Q 011680 295 QWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY----MEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIH 370 (479)
Q Consensus 295 Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~----~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~ 370 (479)
|++||+++|+++++.+.+++||++|+|++....... ......+++|.++|++++|+++||||+|.+.+..
T Consensus 149 ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~------ 222 (262)
T cd07395 149 QDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR------ 222 (262)
T ss_pred HHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE------
Confidence 999999999987534667999999999985443211 1235678899999999999999999999887642
Q ss_pred ecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEE
Q 011680 371 YNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWN 438 (479)
Q Consensus 371 ~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~ 438 (479)
-.|+.|+++++.|.... ....||..++|+.+. ++++++
T Consensus 223 -------------~~g~~~~~~~~~~~~~~----------------~~~~g~~~~~v~~~~-~~~~~~ 260 (262)
T cd07395 223 -------------YGGLEMVVTSAIGAQLG----------------NDKSGLRIVKVTEDK-IVHEYY 260 (262)
T ss_pred -------------ECCEEEEEcCceecccC----------------CCCCCcEEEEECCCc-eeeeee
Confidence 13667888877775321 113699999996544 677775
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-24 Score=205.76 Aligned_cols=217 Identities=18% Similarity=0.193 Sum_probs=151.7
Q ss_pred EEEEEecCCCCCCh-------------HHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCC
Q 011680 163 TFGIIGDLGQTYNS-------------LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227 (479)
Q Consensus 163 ~f~~~gD~~~~~~~-------------~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P 227 (479)
||++++|+|.+... ..+++.+.+. +||+||++||+++... ...|+.+.+.++.+ .+|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~~--~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS------PESYERLRELLAAL--PIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC------HHHHHHHHHHHhhc--CCC
Confidence 69999999987531 2334455555 8999999999998755 55666676776665 789
Q ss_pred eEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCC----CCHHHHHHHHHHH
Q 011680 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYV----KYTPQWWWLREEL 303 (479)
Q Consensus 228 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~----~~~~Q~~WL~~~L 303 (479)
++.++||||... .+...|..... .....+|+|+.++++||+||+..... ..++|++||++.|
T Consensus 73 ~~~v~GNHD~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L 138 (240)
T cd07402 73 VYLLPGNHDDRA-----------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAAL 138 (240)
T ss_pred EEEeCCCCCCHH-----------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHH
Confidence 999999999621 12222211100 12356889999999999999865321 2578999999999
Q ss_pred hhcccCCCCeEEEEecccccccCCCCC-CCCHHHHHHHHHHHHHc-CCcEEEEcccccceeeeeeeCCeecccCCccccc
Q 011680 304 KKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPV 381 (479)
Q Consensus 304 ~~~~~~~~~w~IV~~H~P~~~~~~~~~-~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~ 381 (479)
++. ..+++|+++|+|++....... ......++.+.+++.++ +|+++|+||.|......
T Consensus 139 ~~~---~~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~----------------- 198 (240)
T cd07402 139 AEA---PDKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS----------------- 198 (240)
T ss_pred HhC---CCCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE-----------------
Confidence 985 346789999999976542111 11112367899999999 99999999999876542
Q ss_pred CCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecC
Q 011680 382 PDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNR 430 (479)
Q Consensus 382 ~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~ 430 (479)
-+|+.++++|+.|.... ..+...+..+..+||..+.+.++
T Consensus 199 --~~g~~~~~~gs~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
T cd07402 199 --WGGIPLLTAPSTCHQFA-------PDLDDFALDALAPGYRALSLHED 238 (240)
T ss_pred --ECCEEEEEcCcceeeec-------CCCCcccccccCCCCcEEEEecC
Confidence 25678889888887542 22334454456789998888543
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-23 Score=201.18 Aligned_cols=197 Identities=21% Similarity=0.260 Sum_probs=132.1
Q ss_pred eEEEEEecCCCCCC----------hHH----HHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCC
Q 011680 162 YTFGIIGDLGQTYN----------SLS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227 (479)
Q Consensus 162 ~~f~~~gD~~~~~~----------~~~----~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P 227 (479)
|||+++||+|.... +.. +++.+.+.+||+||++||+++.+.. .. ...|+.+.+.+..+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~--~~-~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNA--RA-EEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCc--hH-HHHHHHHHHHHHhc--CCC
Confidence 69999999996532 112 2344444489999999999976541 01 25555555555554 589
Q ss_pred eEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC-------------------
Q 011680 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP------------------- 288 (479)
Q Consensus 228 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~------------------- 288 (479)
+++++||||+.... ..+.. + .. ....+..||+|+.++++||+||+...
T Consensus 76 ~~~v~GNHD~~~~~--------~~~~~-~-~~---~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~ 142 (267)
T cd07396 76 VHHVLGNHDLYNPS--------REYLL-L-YT---LLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNS 142 (267)
T ss_pred EEEecCcccccccc--------Hhhhh-c-cc---ccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhc
Confidence 99999999974211 11100 0 00 01123569999999999999999531
Q ss_pred -------------C--CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCcEE
Q 011680 289 -------------Y--VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFI 352 (479)
Q Consensus 289 -------------~--~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~Vdlv 352 (479)
+ ...++|++||+++|+++.. ...++||++|+|++...... ......++.+.+++.++ +|+++
T Consensus 143 ~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~v 220 (267)
T cd07396 143 NLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKAC 220 (267)
T ss_pred hhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEEE
Confidence 0 1247999999999998642 33578999999987654311 11112256788999995 79999
Q ss_pred EEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCC
Q 011680 353 FAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGN 397 (479)
Q Consensus 353 lsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~ 397 (479)
|+||+|.++... .+|+.|+++|+-..
T Consensus 221 ~~GH~H~~~~~~-------------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 221 ISGHDHEGGYAQ-------------------RHGIHFLTLEGMVE 246 (267)
T ss_pred EcCCcCCCCccc-------------------cCCeeEEEechhhc
Confidence 999999987532 36778888876543
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-22 Score=195.36 Aligned_cols=240 Identities=17% Similarity=0.153 Sum_probs=149.4
Q ss_pred EEECCCCCCCCCCeEEEEEecCCCCCC---------hH----HHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHH
Q 011680 149 WFQTPPKIHPDAPYTFGIIGDLGQTYN---------SL----STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWD 213 (479)
Q Consensus 149 ~F~T~p~~~~~~~~~f~~~gD~~~~~~---------~~----~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~ 213 (479)
..+|+++ +..+++|++++|+|.... .. .+++.+.+. +||+||++||+++... ...++
T Consensus 4 ~~~~~~~--~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~------~~~~~ 75 (275)
T PRK11148 4 LLTLPLA--GEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS------SEAYQ 75 (275)
T ss_pred ccccccC--CCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC------HHHHH
Confidence 3566665 457899999999997321 12 234444443 6999999999998654 45566
Q ss_pred HHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC---CC
Q 011680 214 SWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP---YV 290 (479)
Q Consensus 214 ~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~---~~ 290 (479)
.+.+.++.+ ..|+++++||||... .+..+.....+ ...++.+..++++||+|||... .+
T Consensus 76 ~~~~~l~~l--~~Pv~~v~GNHD~~~--------~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~~~G 137 (275)
T PRK11148 76 HFAEGIAPL--RKPCVWLPGNHDFQP--------AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGVPHG 137 (275)
T ss_pred HHHHHHhhc--CCcEEEeCCCCCChH--------HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCCcCC
Confidence 666666655 689999999999631 11111111111 1123334455699999999643 11
Q ss_pred -CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCC-CCCCCHHHHHHHHHHHHHc-CCcEEEEcccccceeeeeee
Q 011680 291 -KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV-HYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSYRIS 367 (479)
Q Consensus 291 -~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~-~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yer~~p~~ 367 (479)
.+.+|++||+++|+++ +.+..||++|||+...+.. .........++|.++++++ +|+++|+||+|.....
T Consensus 138 ~l~~~ql~wL~~~L~~~---~~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~---- 210 (275)
T PRK11148 138 ELSEYQLEWLERKLADA---PERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL---- 210 (275)
T ss_pred EeCHHHHHHHHHHHhhC---CCCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc----
Confidence 2589999999999985 3345666677655433321 1111112346889999998 8999999999985432
Q ss_pred CCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCC
Q 011680 368 NIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDG 443 (479)
Q Consensus 368 ~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg 443 (479)
...|+.++++++.+..... ..+.+ +.....+||..+++.+++.+..++++-+++
T Consensus 211 ---------------~~~gi~~~~~ps~~~q~~~------~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~ 264 (275)
T PRK11148 211 ---------------DWNGRRLLATPSTCVQFKP------HCTNF-TLDTVAPGWRELELHADGSLETEVHRLADT 264 (275)
T ss_pred ---------------eECCEEEEEcCCCcCCcCC------CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEEcCCC
Confidence 1356777777666543211 01111 122334799999997666676666664443
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=4e-21 Score=185.84 Aligned_cols=191 Identities=17% Similarity=0.162 Sum_probs=123.7
Q ss_pred EEEEecCCCCCChHH--------HHHHHHHhCCCEEEEcCcccccCCCC---CCchhhhHHHHHHHHHHHhh--cCCeEE
Q 011680 164 FGIIGDLGQTYNSLS--------TLKHYMQSGGQSVLFLGDLSYADRYE---YNDVGIRWDSWGRFIEQSAA--YQPWIW 230 (479)
Q Consensus 164 f~~~gD~~~~~~~~~--------~l~~~~~~~pD~vl~~GDl~y~~~~~---~~~~~~~~~~~~~~~~~l~~--~~P~~~ 230 (479)
|++++|+|.+....+ .++.+.+.+||++|++||+++..... ....+.+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 789999998744211 22334444999999999999754311 11125678888777655432 589999
Q ss_pred cCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceE--EEEcCeEEEEEeecCCCC----------CCCHHHHHH
Q 011680 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWY--AIRRASAHIIVLSSYSPY----------VKYTPQWWW 298 (479)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yy--sf~~g~v~fi~Lds~~~~----------~~~~~Q~~W 298 (479)
++||||+....... .....|.++..... ....+| .++.|+++||+|||.... ...++|++|
T Consensus 82 v~GNHD~~~~~~~~--~~~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~w 154 (256)
T cd07401 82 IRGNHDLFNIPSLD--SENNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDR 154 (256)
T ss_pred eCCCCCcCCCCCcc--chhhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHHH
Confidence 99999984322111 11112221111110 012233 334589999999997421 124899999
Q ss_pred HHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeee
Q 011680 299 LREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRIS 367 (479)
Q Consensus 299 L~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~ 367 (479)
|+++|+++ .+.+++||++|+|+....... ....+ .+.++|++++|+++||||.|.+++..|+-
T Consensus 155 L~~~L~~~--~~~~~~IV~~HhP~~~~~~~~---~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 155 LEKELEKS--TNSNYTIWFGHYPTSTIISPS---AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHhc--ccCCeEEEEEcccchhccCCC---cchhH-HHHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 99999975 345689999999996533211 11222 38999999999999999999999966753
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.6e-20 Score=174.38 Aligned_cols=150 Identities=19% Similarity=0.240 Sum_probs=110.4
Q ss_pred eEEEEEecCCCCCC-h----HHHHHHHH----HhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-hcCCeEEc
Q 011680 162 YTFGIIGDLGQTYN-S----LSTLKHYM----QSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQPWIWS 231 (479)
Q Consensus 162 ~~f~~~gD~~~~~~-~----~~~l~~~~----~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v 231 (479)
|||++++|+|.... . ...++.+. +.+||+||++||+++.+. . ..+|+.+.+.++.+. ..+|++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~----~-~~~~~~~~~~~~~l~~~~~p~~~~ 75 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGD----N-DAEWEAADKAFARLDKAGIPYSVL 75 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCC----C-HHHHHHHHHHHHHHHHcCCcEEEE
Confidence 68999999987543 1 12333333 338999999999998654 3 568888888888886 57999999
Q ss_pred CCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCC
Q 011680 232 AGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311 (479)
Q Consensus 232 ~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 311 (479)
+||||. ++.+|+. ...+|++||+++|++. +.
T Consensus 76 ~GNHD~------------------------------------------~~~ld~~----~~~~ql~WL~~~L~~~---~~ 106 (214)
T cd07399 76 AGNHDL------------------------------------------VLALEFG----PRDEVLQWANEVLKKH---PD 106 (214)
T ss_pred CCCCcc------------------------------------------hhhCCCC----CCHHHHHHHHHHHHHC---CC
Confidence 999992 1222222 2489999999999984 34
Q ss_pred CeEEEEecccccccCCCCCCC-----CHHHHHHHHHHHHHc-CCcEEEEcccccceeeee
Q 011680 312 PWLIVLMHVPLYSSNVVHYME-----GESMRAVFESWFVHS-RVDFIFAGHVHAYERSYR 365 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~~~~~~-----~~~~r~~l~~l~~~~-~VdlvlsGH~H~yer~~p 365 (479)
+++||++|+|++..+...... ....++.|+++++++ +|+++|+||+|.+.+...
T Consensus 107 ~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 107 RPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred CCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 679999999998654332111 123456788999998 799999999999987753
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-18 Score=170.95 Aligned_cols=194 Identities=18% Similarity=0.191 Sum_probs=126.2
Q ss_pred EEecCCCCCC---hHHHHHHHHHh--CCCEEEEcCcccccCCCCCCch-hh--hHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 166 IIGDLGQTYN---SLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDV-GI--RWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 166 ~~gD~~~~~~---~~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~-~~--~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
-+|+.++... ...+++.+.+. +|||||++||++..+.+..... .. .+..+.+.++.....+|+++++||||+
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~ 121 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDS 121 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCC
Confidence 3556553322 23456667776 8999999999998876322110 11 244556666666678999999999997
Q ss_pred ccCCCCC----ccccccccccccc--CCcCCC-CCCCCceEEEE-cCeEEEEEeecCCCCC-----------CCHHHHHH
Q 011680 238 EFMPNMG----EVIPFKSYLHRIA--TPYTAS-KSTNPLWYAIR-RASAHIIVLSSYSPYV-----------KYTPQWWW 298 (479)
Q Consensus 238 ~~~~~~~----~~~~~~~~~~~f~--~P~~~~-~~~~~~yysf~-~g~v~fi~Lds~~~~~-----------~~~~Q~~W 298 (479)
....... ....+..+...|. +|..+. ....+.||++. .++++||+|||...+. ....|++|
T Consensus 122 ~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~W 201 (296)
T cd00842 122 YPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQW 201 (296)
T ss_pred CcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHH
Confidence 5321110 0111222222232 332211 11235689998 8889999999975321 23789999
Q ss_pred HHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcccccceee
Q 011680 299 LREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAYERS 363 (479)
Q Consensus 299 L~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~--VdlvlsGH~H~yer~ 363 (479)
|+++|++++. +...++|++|+|+....... .....+.|.+++.+|+ |.++|+||+|..+..
T Consensus 202 L~~~L~~a~~-~~~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 202 LEDELQEAEQ-AGEKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred HHHHHHHHHH-CCCeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 9999998743 23567889999997643221 1356789999999997 778999999987765
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.4e-17 Score=158.77 Aligned_cols=170 Identities=22% Similarity=0.252 Sum_probs=109.1
Q ss_pred HHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHH-HHHHHHHH---hhcCCeEEcCCCcccccCCCCCccccccccc
Q 011680 179 TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQS---AAYQPWIWSAGNHEIEFMPNMGEVIPFKSYL 253 (479)
Q Consensus 179 ~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~-~~~~~~~l---~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~ 253 (479)
.+..+.+. +||+||++||+++.+.. .. ..+|.+ +.++.+-+ ....|++.++||||+.+..... ......|.
T Consensus 36 ~~~~~~~~l~PD~vv~lGDL~d~G~~--~~-~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~~~~~rf~ 111 (257)
T cd08163 36 NWRYMQKQLKPDSTIFLGDLFDGGRD--WA-DEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-LPVRQRFE 111 (257)
T ss_pred HHHHHHHhcCCCEEEEecccccCCee--Cc-HHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-HHHHHHHH
Confidence 34444444 99999999999987541 12 345543 32322222 2247899999999985432111 11234555
Q ss_pred ccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC-----CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCC
Q 011680 254 HRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY-----VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV 328 (479)
Q Consensus 254 ~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~ 328 (479)
+.|. ...|+|++|+++||+|||.... .....|++||++.|+.. .....+||++|+|+|.....
T Consensus 112 ~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~--~~~~p~ILl~H~Plyr~~~~ 179 (257)
T cd08163 112 KYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMK--VKSKPRILLTHVPLYRPPNT 179 (257)
T ss_pred HHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhcc--CCCCcEEEEeccccccCCCC
Confidence 5552 2357899999999999996422 13467999999999864 23456899999999864332
Q ss_pred CCC---C---------CHH----H-HHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 329 HYM---E---------GES----M-RAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 329 ~~~---~---------~~~----~-r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
..+ + +.. + .+.-..||.+.++.+||+||+|.|-...
T Consensus 180 ~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 180 SCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred CCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 111 0 000 1 2344467788899999999999988653
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-18 Score=155.65 Aligned_cols=189 Identities=21% Similarity=0.221 Sum_probs=98.9
Q ss_pred eEEEEEecCCCCCChH----HHHHHH-HHhCCCEEEEcCcccccCCCCCCchhhhHHHHH-HHHHHHhhcCCeEEcCCCc
Q 011680 162 YTFGIIGDLGQTYNSL----STLKHY-MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWG-RFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~----~~l~~~-~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~-~~~~~l~~~~P~~~v~GNH 235 (479)
+||+++||+|...... ..+... .+.++|+||++||+++.+. . ...+.... ..........|+++++|||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGN----P-SEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSS----H-HHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeecccccccc----c-cccchhhhccchhhhhcccccccccccc
Confidence 6999999999875433 222222 3339999999999999876 2 22222211 1233445689999999999
Q ss_pred ccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCC---HHHHHHHHHHHhhcccCCCC
Q 011680 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKY---TPQWWWLREELKKVDREKTP 312 (479)
Q Consensus 236 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~---~~Q~~WL~~~L~~~~~~~~~ 312 (479)
|+.......................... ..+........................ ..++.|+...++. ...+
T Consensus 76 D~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 150 (200)
T PF00149_consen 76 DYYSGNSFYGFYDYQFEDYYGNYNYYYS--YFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEA---KNDD 150 (200)
T ss_dssp SSHHHHHHHHHHHHHHSSEEECSSEEEC--TESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHE---EEES
T ss_pred ccceeccccccccccccccccccccccc--cCcceeeecccccccccccccccccccccchhccccccccccc---cccc
Confidence 9743110000000000000000000000 000001111111111111111111111 2333333333333 4567
Q ss_pred eEEEEecccccccCCCCCC--CCHHHHHHHHHHHHHcCCcEEEEcccccc
Q 011680 313 WLIVLMHVPLYSSNVVHYM--EGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (479)
Q Consensus 313 w~IV~~H~P~~~~~~~~~~--~~~~~r~~l~~l~~~~~VdlvlsGH~H~y 360 (479)
++||++|+|+++....... .....++.+..++.+++|+++|+||+|.|
T Consensus 151 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 151 PVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9999999999876643211 11345788999999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-15 Score=142.63 Aligned_cols=150 Identities=18% Similarity=0.225 Sum_probs=98.8
Q ss_pred CeEEEEEecCCCCCCh---------HHH---HHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cC
Q 011680 161 PYTFGIIGDLGQTYNS---------LST---LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQ 226 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~---------~~~---l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~ 226 (479)
.+||++++|+|..... ..+ +.++.+. +||+||++||+++..... ...+..+.++++.+.. .+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~----~~~~~~~~~~~~~l~~~~~ 77 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTN----DNSTSALDKAVSPMIDRKI 77 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCc----hHHHHHHHHHHHHHHHcCC
Confidence 5899999999986432 122 3333333 899999999999876511 1134555566666543 69
Q ss_pred CeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhc
Q 011680 227 PWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKV 306 (479)
Q Consensus 227 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~ 306 (479)
|+++++||||.. . .....|++||+++|++.
T Consensus 78 p~~~~~GNHD~~-------------------------------------------------g-~l~~~ql~wL~~~l~~~ 107 (199)
T cd07383 78 PWAATFGNHDGY-------------------------------------------------D-WIRPSQIEWFKETSAAL 107 (199)
T ss_pred CEEEECccCCCC-------------------------------------------------C-CCCHHHHHHHHHHHHHH
Confidence 999999999910 0 12368999999999985
Q ss_pred c--cCCCCeEEEEecccccccCCC---------CCCC---CHHHHHHH-HHHHHHcCCcEEEEcccccceeee
Q 011680 307 D--REKTPWLIVLMHVPLYSSNVV---------HYME---GESMRAVF-ESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 307 ~--~~~~~w~IV~~H~P~~~~~~~---------~~~~---~~~~r~~l-~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
. +....+.++++|+|+...... ...+ .......+ ..+....+|+++|+||+|.++...
T Consensus 108 ~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 108 KKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred hhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 3 224468999999998653221 0001 11122233 334466789999999999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-15 Score=145.73 Aligned_cols=177 Identities=18% Similarity=0.139 Sum_probs=108.2
Q ss_pred EEEEecCCCCCC-----------hHHHHHHHHHh------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC
Q 011680 164 FGIIGDLGQTYN-----------SLSTLKHYMQS------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (479)
Q Consensus 164 f~~~gD~~~~~~-----------~~~~l~~~~~~------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~ 226 (479)
+.+++|+|.... ..+.++.+.+. +||+||++||+++... ........+.++.+ ..
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~------~~~~~~~l~~l~~l--~~ 72 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK------LEEAKLDLAWIDAL--PG 72 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC------hHHHHHHHHHHHhC--CC
Confidence 357899987621 13455555554 9999999999985432 22222223333332 35
Q ss_pred CeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCC----CC-----------C-
Q 011680 227 PWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS----PY-----------V- 290 (479)
Q Consensus 227 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~----~~-----------~- 290 (479)
|+++|+||||+... ....+.+.+ +..... -..-.++.++++.|++++... .+ .
T Consensus 73 ~v~~V~GNHD~~~~-------~~~~~~~~l--~~~~~~--~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
T cd07393 73 TKVLLKGNHDYWWG-------SASKLRKAL--EESRLA--LLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDE 141 (232)
T ss_pred CeEEEeCCccccCC-------CHHHHHHHH--HhcCeE--EeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHH
Confidence 78999999997211 111111111 110000 000233556788898876311 11 0
Q ss_pred -CCHHHHHHHHHHHhhcccCC-CCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeee
Q 011680 291 -KYTPQWWWLREELKKVDREK-TPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRIS 367 (479)
Q Consensus 291 -~~~~Q~~WL~~~L~~~~~~~-~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~ 367 (479)
....|++||++.|+++.... ..++|+++|+|++..... ...+..++.+++++++|+||+|..++..|+.
T Consensus 142 ~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~ 212 (232)
T cd07393 142 KIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICVYGHLHGVGRDRAIN 212 (232)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEEECCCCCCccccccc
Confidence 02568999999999854222 247999999998764321 2356788899999999999999999887764
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.66 E-value=3e-15 Score=151.99 Aligned_cols=94 Identities=14% Similarity=0.205 Sum_probs=72.1
Q ss_pred CCceEEEE-cCeEEEEEeecCCCC-----CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCC-----CCCHH
Q 011680 267 NPLWYAIR-RASAHIIVLSSYSPY-----VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY-----MEGES 335 (479)
Q Consensus 267 ~~~yysf~-~g~v~fi~Lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~-----~~~~~ 335 (479)
+..||+|+ .++++||+|||.... ...++|++||+++|++ .+.+++||++|||++....... .....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~---a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA---SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc---CCCCCEEEEECCCCcccccccccccccccccc
Confidence 45699999 899999999997532 1258999999999998 4557899999999987543110 11122
Q ss_pred HHHHHHHHHHHc-CCcEEEEcccccceee
Q 011680 336 MRAVFESWFVHS-RVDFIFAGHVHAYERS 363 (479)
Q Consensus 336 ~r~~l~~l~~~~-~VdlvlsGH~H~yer~ 363 (479)
..++|.++|+++ +|.++|+||.|.-...
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 356899999998 7999999999976643
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.9e-15 Score=139.07 Aligned_cols=167 Identities=11% Similarity=0.068 Sum_probs=101.9
Q ss_pred EEEEecCCCCCChHHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCC
Q 011680 164 FGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNM 243 (479)
Q Consensus 164 f~~~gD~~~~~~~~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 243 (479)
++++||+|........ ..+.+.++|+||++||+++... ......+ +.+.. ...|+++++||||....
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~------~~~~~~~-~~l~~--~~~p~~~v~GNHD~~~~--- 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGG------KEAAVEI-NLLLA--IGVPVLAVPGNCDTPEI--- 67 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCC------HHHHHHH-HHHHh--cCCCEEEEcCCCCCHHH---
Confidence 5789999976432222 2344448999999999997654 2222222 33332 26899999999995210
Q ss_pred CcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC--C----CCCHHHHHHHHHHHhhcccCCCCeEEEE
Q 011680 244 GEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP--Y----VKYTPQWWWLREELKKVDREKTPWLIVL 317 (479)
Q Consensus 244 ~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~--~----~~~~~Q~~WL~~~L~~~~~~~~~w~IV~ 317 (479)
........... .+ ..+.++++.|+++++... + ...++|++|+ +.|.. ...+.+|++
T Consensus 68 -----~~~~~~~~~~~-------~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~ilv 129 (188)
T cd07392 68 -----LGLLTSAGLNL-------HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLILV 129 (188)
T ss_pred -----HHhhhcCcEec-------CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEEE
Confidence 01100000000 11 234577899999987432 1 2346889998 45544 344678999
Q ss_pred ecccccccC-CCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 318 MHVPLYSSN-VVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 318 ~H~P~~~~~-~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
+|+|++... .........-.+.+.+++++++++++|+||+|.-.
T Consensus 130 ~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 130 THAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred ECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 999997631 11111101124678888999999999999999754
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.5e-15 Score=140.07 Aligned_cols=176 Identities=14% Similarity=0.110 Sum_probs=104.6
Q ss_pred EEEEEecCCCCCCh---HH----HHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCc
Q 011680 163 TFGIIGDLGQTYNS---LS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 163 ~f~~~gD~~~~~~~---~~----~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 235 (479)
||++++|+|..... .. .++.+.+.++|+||++||++.... +...+.+.+..+ ...|++.++|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~--------~~~~~~~~l~~~-~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQ--------RSLPFIEKLQEL-KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchh--------hHHHHHHHHHHh-cCCcEEEECCCC
Confidence 58999999965321 22 334444559999999999996421 112333333332 458999999999
Q ss_pred ccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC--------------------------
Q 011680 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY-------------------------- 289 (479)
Q Consensus 236 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~-------------------------- 289 (479)
|+.... .+..+...+. + ....+.++.+..++++|++++...++
T Consensus 72 D~~~~~------~~~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (239)
T TIGR03729 72 DMLKDL------TYEEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKR 140 (239)
T ss_pred CCCCCC------CHHHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCC
Confidence 963111 1111111110 0 00112233344467888888732111
Q ss_pred C-----CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCC------CCCCC-C-HHHHHHHHHHHHHcCCcEEEEcc
Q 011680 290 V-----KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNV------VHYME-G-ESMRAVFESWFVHSRVDFIFAGH 356 (479)
Q Consensus 290 ~-----~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~------~~~~~-~-~~~r~~l~~l~~~~~VdlvlsGH 356 (479)
. ....|++||++.|++. ..+.+||++|+|+..... ..+.. . ......|.+++++++++++|+||
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~---~~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH 217 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQL---DNKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGH 217 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhc---CCCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECC
Confidence 0 1267899999999885 334589999999854211 11110 0 01136788899999999999999
Q ss_pred cccce
Q 011680 357 VHAYE 361 (479)
Q Consensus 357 ~H~ye 361 (479)
+|.-.
T Consensus 218 ~H~~~ 222 (239)
T TIGR03729 218 LHRRF 222 (239)
T ss_pred ccCCC
Confidence 99765
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.5e-14 Score=140.05 Aligned_cols=179 Identities=19% Similarity=0.188 Sum_probs=115.4
Q ss_pred eEEEEEecCCCC--CC-hHHHH----HHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCC
Q 011680 162 YTFGIIGDLGQT--YN-SLSTL----KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (479)
Q Consensus 162 ~~f~~~gD~~~~--~~-~~~~l----~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GN 234 (479)
++|+.++|.|.. .. ....+ +.+...+||+||++||+++.+. ...++...++++......|++++|||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~------~~~~~~~~~~l~~~~~~~~~~~vpGN 74 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE------PEEYRRLKELLARLELPAPVIVVPGN 74 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC------HHHHHHHHHHHhhccCCCceEeeCCC
Confidence 489999999998 22 23333 4444448999999999998844 55556666666644457889999999
Q ss_pred cccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEc-CeEEEEEeecCCCC----CCCHHHHHHHHHHHhhcccC
Q 011680 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRR-ASAHIIVLSSYSPY----VKYTPQWWWLREELKKVDRE 309 (479)
Q Consensus 235 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~-g~v~fi~Lds~~~~----~~~~~Q~~WL~~~L~~~~~~ 309 (479)
||.... ....+...+.... ..+-.... ++++++++|+.... ..+..|++||++.|++....
T Consensus 75 HD~~~~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~ 140 (301)
T COG1409 75 HDARVV-------NGEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPER 140 (301)
T ss_pred CcCCch-------HHHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccc
Confidence 996421 1122222221110 01111112 67899999997642 23689999999999985322
Q ss_pred CCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcccccc
Q 011680 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAY 360 (479)
Q Consensus 310 ~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~--VdlvlsGH~H~y 360 (479)
....+|+++|||+.................+..++..++ |+++|+||.|.-
T Consensus 141 ~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 141 AKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred cCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 112567777777765444332222233456667788888 999999999976
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.5e-14 Score=123.86 Aligned_cols=116 Identities=20% Similarity=0.210 Sum_probs=85.0
Q ss_pred EEEEecCCCCCChHH-----------HHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhc-CCeEEc
Q 011680 164 FGIIGDLGQTYNSLS-----------TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY-QPWIWS 231 (479)
Q Consensus 164 f~~~gD~~~~~~~~~-----------~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~-~P~~~v 231 (479)
|++++|+|.+..... .++.+.+.++|+|+++||+++... ...|+.+.++++.+... .|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGL------PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCC------HHHHHHHHHHHHHccccCCcEEEe
Confidence 578999998754211 122233349999999999998765 56677777778777543 699999
Q ss_pred CCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCC
Q 011680 232 AGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311 (479)
Q Consensus 232 ~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 311 (479)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999992
Q ss_pred CeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceee
Q 011680 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~ 363 (479)
|+++|+|++.......... ..++.+.+++.+++++++++||+|.....
T Consensus 81 ---iv~~Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 ---IVVLHHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred ---EEEecCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 8899999976543211111 14567889999999999999999987644
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.7e-14 Score=134.36 Aligned_cols=198 Identities=15% Similarity=0.018 Sum_probs=113.9
Q ss_pred CeEEEEEecCCCCCCh-----HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCc
Q 011680 161 PYTFGIIGDLGQTYNS-----LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~-----~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 235 (479)
++||++++|+|..... .+.++.+.+.+||+||++||+++... ... +.+.+.+..+....|++.++|||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~------~~~-~~~~~~l~~l~~~~~v~~v~GNH 73 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSV------DVL-ELLLELLKKLKAPLGVYAVLGNH 73 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcc------hhh-HHHHHHHhccCCCCCEEEECCCc
Confidence 4799999999987432 23334444459999999999998654 111 34555666665678999999999
Q ss_pred ccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEE
Q 011680 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLI 315 (479)
Q Consensus 236 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~I 315 (479)
|+..... ..+........+.. ..+.+..++.++..+.++..... ....+++.+.+++. .+.++.|
T Consensus 74 D~~~~~~----~~~~~~l~~~~v~~-----L~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~--~~~~~~I 138 (223)
T cd07385 74 DYYSGDE----ENWIEALESAGITV-----LRNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL--DEDDPNI 138 (223)
T ss_pred ccccCch----HHHHHHHHHcCCEE-----eecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC--CCCCCEE
Confidence 9753211 00001111111110 11234556666544444331111 12234566677654 3456889
Q ss_pred EEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCee---cccCCcccccCCCCCCeEEEe
Q 011680 316 VLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHY---NFTSGDRYPVPDKSAPVYLTV 392 (479)
Q Consensus 316 V~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~---~i~~g~~~~~~~~~g~~yi~~ 392 (479)
++.|.|.+.. .+.+.++|++++||+|..|...|...... ....-....+...+..+||..
T Consensus 139 ~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~Vs~ 201 (223)
T cd07385 139 LLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDYGLYRKGGSQLYVSR 201 (223)
T ss_pred EEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCcccceEEEECCEEEEEcC
Confidence 9999986321 12567899999999999997766543210 000000111233555778888
Q ss_pred CCCCC
Q 011680 393 GDGGN 397 (479)
Q Consensus 393 G~gG~ 397 (479)
|.|..
T Consensus 202 G~G~~ 206 (223)
T cd07385 202 GLGTW 206 (223)
T ss_pred CccCC
Confidence 87764
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.2e-13 Score=126.15 Aligned_cols=175 Identities=11% Similarity=0.118 Sum_probs=101.6
Q ss_pred CeEEEEEecCCCCCChHHH-HHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cCCeEEcCCCcccc
Q 011680 161 PYTFGIIGDLGQTYNSLST-LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEIE 238 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~-l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 238 (479)
+-|++++||+|......+. ++.+.+.++|+||++||+++.+. . ... +.++++.+.. ..|+++++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~----~-~~~---~~~~l~~l~~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAA----K-SED---YAAFFRILGEAHLPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCC----C-HHH---HHHHHHHHHhcCCceEEEcCCCChH
Confidence 4689999999964322222 22223348999999999998642 1 222 3334444332 57999999999942
Q ss_pred cCCCCCcccccc-cccccccCCcCCCCCCCCceEEEEc-CeEEEEEeecCCCC--CCCHHHH----HHHHH-HHhhcccC
Q 011680 239 FMPNMGEVIPFK-SYLHRIATPYTASKSTNPLWYAIRR-ASAHIIVLSSYSPY--VKYTPQW----WWLRE-ELKKVDRE 309 (479)
Q Consensus 239 ~~~~~~~~~~~~-~~~~~f~~P~~~~~~~~~~yysf~~-g~v~fi~Lds~~~~--~~~~~Q~----~WL~~-~L~~~~~~ 309 (479)
. ...+. .+.....+|.. .. ..+.+ ..+ |++.|+.|+....+ ...++|. +||.+ .|+.....
T Consensus 76 v------~~~l~~~~~~~~~~p~~-~~-lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~ 145 (224)
T cd07388 76 L------WEYLREAYNAELVHPEI-RN-VHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL 145 (224)
T ss_pred H------HHHHHHHhcccccCccc-ee-cCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhC
Confidence 0 00001 11111111221 00 11122 333 56999999965543 2344542 56533 22222112
Q ss_pred CCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccc
Q 011680 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (479)
Q Consensus 310 ~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H 358 (479)
..+..|+++|+|++..+..|. -...+..++++++..+++|||+|
T Consensus 146 ~~~~~VLv~H~PP~g~g~~h~-----GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 146 KDYRKVFLFHTPPYHKGLNEQ-----GSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred CCCCeEEEECCCCCCCCCCcc-----CHHHHHHHHHHhCCCEEEEcCCc
Confidence 345789999999998743232 13577788999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.2e-14 Score=104.93 Aligned_cols=62 Identities=40% Similarity=0.716 Sum_probs=41.5
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEE
Q 011680 385 SAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSV 451 (479)
Q Consensus 385 ~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~ 451 (479)
++||||++|+||+.+ ..+..++|+|+++|...|||++|+|.|+|||.|+|+++.||+ |.|+|
T Consensus 1 kapVhiv~G~aG~~l---~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~--v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGL---DPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGS--VLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T-------B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T---CEE-
T ss_pred CCCEEEEECcCCCCc---ccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCc--EecCC
Confidence 489999999999943 346678899999999999999999999999999999999998 89987
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.5e-13 Score=134.18 Aligned_cols=93 Identities=18% Similarity=0.299 Sum_probs=65.2
Q ss_pred CCceEEEE-cCeE--EEEEeecCCCC--------C---CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCC-CCCC
Q 011680 267 NPLWYAIR-RASA--HIIVLSSYSPY--------V---KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNV-VHYM 331 (479)
Q Consensus 267 ~~~yysf~-~g~v--~fi~Lds~~~~--------~---~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~-~~~~ 331 (479)
+..||+|+ .|++ ++|+||+.... . ..++|++||+++|+++. .+.+++||++|+|+.+.+. ....
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCcccCCccchhh
Confidence 34599999 5855 99999986521 1 24899999999999863 2457888888888875222 1100
Q ss_pred ------------CCHHHHHHHHHHHHHc-CCcEEEEcccccc
Q 011680 332 ------------EGESMRAVFESWFVHS-RVDFIFAGHVHAY 360 (479)
Q Consensus 332 ------------~~~~~r~~l~~l~~~~-~VdlvlsGH~H~y 360 (479)
.+...-.+|..+|.+| +|.++||||.|.-
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 0111124788999998 5889999999953
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.4e-13 Score=122.83 Aligned_cols=145 Identities=17% Similarity=0.265 Sum_probs=87.3
Q ss_pred EEEEecCCCCCChHHHH--HHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCC
Q 011680 164 FGIIGDLGQTYNSLSTL--KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (479)
Q Consensus 164 f~~~gD~~~~~~~~~~l--~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 241 (479)
|+++||+|......... +.+.+.++|+++++||+++... ...+.. .........|++.++||||+.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~------~~~~~~---~~~~~~~~~~v~~v~GNHD~~--- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTD------APRFAP---LLLALKGFEPVIYVPGNHEFY--- 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcc------hHHHHH---HHHhhcCCccEEEeCCCcceE---
Confidence 57899999875432221 1223348999999999997543 222221 223334568999999999952
Q ss_pred CCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEeccc
Q 011680 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVP 321 (479)
Q Consensus 242 ~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P 321 (479)
-+| .+ ...||.+.. ..+++.+|+.++++ +.+||++|||
T Consensus 69 ------------~~~--~G------~~~w~~~~~---------------~~~~~~~~~~~d~~-------~~~vv~~Hhp 106 (166)
T cd07404 69 ------------VRI--IG------TTLWSDISL---------------FGEAAARMRMNDFR-------GKTVVVTHHA 106 (166)
T ss_pred ------------EEE--Ee------eecccccCc---------------cchHHHHhCCCCCC-------CCEEEEeCCC
Confidence 011 00 012333221 12344455544443 3689999999
Q ss_pred ccccCCCC-C--C-CCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 322 LYSSNVVH-Y--M-EGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 322 ~~~~~~~~-~--~-~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
++...... . . .....++.+..++++++|+++++||+|....
T Consensus 107 P~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 107 PSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred CCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 98654321 1 1 1224456677888889999999999997643
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.5e-13 Score=125.20 Aligned_cols=186 Identities=13% Similarity=0.091 Sum_probs=104.8
Q ss_pred EEEEEecCCCCCCh------------HHHHHHH----HHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-hc
Q 011680 163 TFGIIGDLGQTYNS------------LSTLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AY 225 (479)
Q Consensus 163 ~f~~~gD~~~~~~~------------~~~l~~~----~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-~~ 225 (479)
||++++|+|.+... ..+++++ .+.+||+||++||+++.... . ...+..+.+.++.+. ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~---~-~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNP---S-PEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCC---C-HHHHHHHHHHHHHHHHCC
Confidence 68999999987431 1233333 34499999999999876431 1 334555666666654 47
Q ss_pred CCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhh
Q 011680 226 QPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKK 305 (479)
Q Consensus 226 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~ 305 (479)
+|+++++||||....... ......+.. +..-.............++.+++.|++++..... ....+.++++..+.+
T Consensus 77 ~~v~~~~GNHD~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~ 152 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGA--LSPLLALSG-LHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRP 152 (223)
T ss_pred CCEEEecCCCCCcccccc--ccchHhhCc-EEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhc
Confidence 899999999997532110 000000100 0000000000011233344556888888754321 123344444555544
Q ss_pred cccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 306 VDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 306 ~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
. ......|+++|+|+.......... .......+...++|++++||.|..+.
T Consensus 153 ~--~~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 153 L--DPDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred c--CCCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCee
Confidence 3 345679999999986544321110 12233446678899999999998764
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-12 Score=127.24 Aligned_cols=197 Identities=14% Similarity=0.101 Sum_probs=109.1
Q ss_pred CCCeEEEEEecCCCCCC-hHH----HHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCC
Q 011680 159 DAPYTFGIIGDLGQTYN-SLS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAG 233 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~-~~~----~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~G 233 (479)
..++||++++|+|.... ... .++.+.+.+||+|+++||+++.+. ...++.+.+.++.+.+..|+++|+|
T Consensus 47 ~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~------~~~~~~~~~~L~~L~~~~pv~~V~G 120 (271)
T PRK11340 47 AAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDM------PLNFSAFSDVLSPLAECAPTFACFG 120 (271)
T ss_pred CCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCc------cccHHHHHHHHHHHhhcCCEEEecC
Confidence 35799999999998632 122 233444459999999999997332 2234556677777766789999999
Q ss_pred CcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCe--EEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCC
Q 011680 234 NHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRAS--AHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311 (479)
Q Consensus 234 NHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~--v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 311 (479)
|||+..... ....+...+. ..+..-..+....+..++ +.++.++.... +... ..+.+++ .
T Consensus 121 NHD~~~~~~-----~~~~~~~~l~--~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~~-----~ 182 (271)
T PRK11340 121 NHDRPVGTE-----KNHLIGETLK--SAGITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASEA-----N 182 (271)
T ss_pred CCCcccCcc-----chHHHHHHHH--hcCcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcCC-----C
Confidence 999742210 0011111110 000001123344455443 56677753211 1100 1112221 3
Q ss_pred CeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCC---cccccCCCCCCe
Q 011680 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSG---DRYPVPDKSAPV 388 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g---~~~~~~~~~g~~ 388 (479)
...|++.|.|-.- +.+.+.++|++||||+|.-|-..|..+.......+ ....+...+..+
T Consensus 183 ~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~~~~~~~~~~~~~~~~G~~~~~~~~l 245 (271)
T PRK11340 183 LPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERQI 245 (271)
T ss_pred CCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccccCccccccccCcccCCcEEeCCcEE
Confidence 4689999999631 12456789999999999988766643221100000 011223345567
Q ss_pred EEEeCCCC
Q 011680 389 YLTVGDGG 396 (479)
Q Consensus 389 yi~~G~gG 396 (479)
||..|-|.
T Consensus 246 ~Vs~G~G~ 253 (271)
T PRK11340 246 YTTRGVGS 253 (271)
T ss_pred EEeCCccC
Confidence 77777774
|
|
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.1e-11 Score=117.17 Aligned_cols=255 Identities=19% Similarity=0.281 Sum_probs=135.0
Q ss_pred CCCeEEEEEecCCCCCC--------------------hHHHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHH
Q 011680 159 DAPYTFGIIGDLGQTYN--------------------SLSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGR 217 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~ 217 (479)
+.+||++.++|+|.+.. ....++++++. +||+|+++||+++... . +..-..++.
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~--t---~Da~~sl~k 125 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHS--T---QDAATSLMK 125 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccc--c---HhHHHHHHH
Confidence 46799999999988643 12335565555 9999999999998844 1 222334566
Q ss_pred HHHHHh-hcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC--CCCCCceE-EEEcCe----------------
Q 011680 218 FIEQSA-AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS--KSTNPLWY-AIRRAS---------------- 277 (479)
Q Consensus 218 ~~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~--~~~~~~yy-sf~~g~---------------- 277 (479)
.++|.. ..+||.+++||||-+..-. ......+.. .+|..-+ ...++.-| -..+|+
T Consensus 126 AvaP~I~~~IPwA~~lGNHDdes~lt---r~ql~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~ 200 (379)
T KOG1432|consen 126 AVAPAIDRKIPWAAVLGNHDDESDLT---RLQLMKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENK 200 (379)
T ss_pred HhhhHhhcCCCeEEEecccccccccC---HHHHHHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCcccccC
Confidence 677764 5899999999999532210 000001110 1222111 00011111 111111
Q ss_pred --EEEEEeecCCC---------CC-CCHHHHHHHHHHHhhc---ccCCCC-eEEEEeccccc--ccCCCC------CCC-
Q 011680 278 --AHIIVLSSYSP---------YV-KYTPQWWWLREELKKV---DREKTP-WLIVLMHVPLY--SSNVVH------YME- 332 (479)
Q Consensus 278 --v~fi~Lds~~~---------~~-~~~~Q~~WL~~~L~~~---~~~~~~-w~IV~~H~P~~--~~~~~~------~~~- 332 (479)
..+++||+..+ |+ ..+.|++||+..-++- +..-.| .-+++.|.|+- ..-... ..+
T Consensus 201 sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~ 280 (379)
T KOG1432|consen 201 SVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEG 280 (379)
T ss_pred ceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeecc
Confidence 23456665432 11 2478999999887331 111123 46788899972 211110 011
Q ss_pred --CHHHHHHHHHHHH-HcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCC
Q 011680 333 --GESMRAVFESWFV-HSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQ 409 (479)
Q Consensus 333 --~~~~r~~l~~l~~-~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~ 409 (479)
......-+...|. +.+|++|++||+|.-....+ -++.+++-=|+|+..-+ + .+
T Consensus 281 ~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~------------------~k~~~wlCygGgaGygg----Y--g~ 336 (379)
T KOG1432|consen 281 VSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGE------------------LKGELWLCYGGGAGYGG----Y--GI 336 (379)
T ss_pred ccccccccHHHHHHHhccCcceEEeccccccceecc------------------cCCeEEEEecCCCccCC----c--Cc
Confidence 1112234555565 78899999999998776543 23446666544432211 1 12
Q ss_pred CCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEE
Q 011680 410 PNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVF 453 (479)
Q Consensus 410 p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i 453 (479)
+.|-. +--+++++....---+|.|.+|+...+.|.-.|
T Consensus 337 ~gw~R------r~Rv~e~d~~~~~IkTWKRl~d~~~~~~D~q~l 374 (379)
T KOG1432|consen 337 GGWER------RARVFELDLNKDRIKTWKRLDDKPLSVIDYQLL 374 (379)
T ss_pred CCccc------ceEEEEccccccccceeeecCCCCcceeeeEEE
Confidence 33421 224455543222233789987776545565443
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.7e-12 Score=106.83 Aligned_cols=116 Identities=22% Similarity=0.234 Sum_probs=83.9
Q ss_pred EEEecCCCCCChHHHHH---HHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCC
Q 011680 165 GIIGDLGQTYNSLSTLK---HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (479)
Q Consensus 165 ~~~gD~~~~~~~~~~l~---~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 241 (479)
+++||+|.+........ ...+.++|+||++||+++... ...+..+...........|++.++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGP------DPEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCC------CchHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 36899988765443332 233349999999999999766 3333333323333456899999999999
Q ss_pred CCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEeccc
Q 011680 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVP 321 (479)
Q Consensus 242 ~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P 321 (479)
|+++|.|
T Consensus 70 -------------------------------------------------------------------------i~~~H~~ 76 (131)
T cd00838 70 -------------------------------------------------------------------------ILLTHGP 76 (131)
T ss_pred -------------------------------------------------------------------------EEEeccC
Confidence 8999999
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 322 LYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
++.............+..+..++.+.+++++|+||.|.+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 77 PYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred CCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 9766543222222257788889999999999999999999874
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.9e-11 Score=111.38 Aligned_cols=163 Identities=15% Similarity=0.130 Sum_probs=104.3
Q ss_pred EEEEEecCCCCCChHHHHHHHH----HhCCCEEEEcCcccccCCCC-----------------CCc---hhhhHHHH--H
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYM----QSGGQSVLFLGDLSYADRYE-----------------YND---VGIRWDSW--G 216 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~----~~~pD~vl~~GDl~y~~~~~-----------------~~~---~~~~~~~~--~ 216 (479)
+|++.||.+...........+. +.+||++|++||.+|++... ... +...+..+ .
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5889999988766666666665 56999999999999998621 011 22223332 2
Q ss_pred HHHHHHhhcCCeEEcCCCcccccCCCCCc-------------ccccccccccccCCcCCCC--CCCCceEEEEcCeE-EE
Q 011680 217 RFIEQSAAYQPWIWSAGNHEIEFMPNMGE-------------VIPFKSYLHRIATPYTASK--STNPLWYAIRRASA-HI 280 (479)
Q Consensus 217 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~~-------------~~~~~~~~~~f~~P~~~~~--~~~~~yysf~~g~v-~f 280 (479)
..++.+.+.+|++.+|++||+..+..... ....++|......+..... .....|++|.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 33567778999999999999865432210 0111233333332222221 23568999999996 99
Q ss_pred EEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcccc
Q 011680 281 IVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVH 358 (479)
Q Consensus 281 i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~--VdlvlsGH~H 358 (479)
|+||+.... ..+......|+.+..++.+.+ -.++|||++|
T Consensus 161 ~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999998652 222334556777777765554 3488999999
Q ss_pred cceee
Q 011680 359 AYERS 363 (479)
Q Consensus 359 ~yer~ 363 (479)
..+-.
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 76643
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.2e-10 Score=101.56 Aligned_cols=116 Identities=18% Similarity=0.176 Sum_probs=74.8
Q ss_pred EEEEEecCCCCCChHHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCC-eEEcCCCcccccCC
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP-WIWSAGNHEIEFMP 241 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P-~~~v~GNHD~~~~~ 241 (479)
||+++||+|.... .+...++|+++++||+++... ...++.+.+.++.+ ..| +++++||||...
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~------~~~~~~~~~~l~~~--~~~~~~~v~GNHD~~~-- 64 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGT------LEELQKFLDWLKSL--PHPHKIVIAGNHDLTL-- 64 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHhC--CCCeEEEEECCCCCcC--
Confidence 5899999997644 222238999999999987543 33344444444443 233 578999999410
Q ss_pred CCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEeccc
Q 011680 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVP 321 (479)
Q Consensus 242 ~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P 321 (479)
. . ..+.|+++|.|
T Consensus 65 --------~------------------------------------------------------~-----~~~~ilv~H~~ 77 (135)
T cd07379 65 --------D------------------------------------------------------P-----EDTDILVTHGP 77 (135)
T ss_pred --------C------------------------------------------------------C-----CCCEEEEECCC
Confidence 0 1 13568889999
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 322 LYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
++............-.+.+.+++.+.+++++++||+|...
T Consensus 78 p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 78 PYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred CCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 9765432211111112456667788899999999999864
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.7e-10 Score=109.36 Aligned_cols=85 Identities=16% Similarity=0.052 Sum_probs=62.1
Q ss_pred EEECCCCCCCCCCeEEEEEecCCCCCChH---HHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhc
Q 011680 149 WFQTPPKIHPDAPYTFGIIGDLGQTYNSL---STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY 225 (479)
Q Consensus 149 ~F~T~p~~~~~~~~~f~~~gD~~~~~~~~---~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~ 225 (479)
.-.++..+....+++++.++|+|...... +.+..+....||+|+++||+++... ......+...++++.+.
T Consensus 32 ~i~~~~~~~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~------~~~~~~~~~~L~~L~~~ 105 (284)
T COG1408 32 TILTPKLPASLQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDR------PPGVAALALFLAKLKAP 105 (284)
T ss_pred EeecCCCCcccCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCC------CCCHHHHHHHHHhhhcc
Confidence 33444444345789999999999875542 2233444448899999999998522 44556777888888889
Q ss_pred CCeEEcCCCccccc
Q 011680 226 QPWIWSAGNHEIEF 239 (479)
Q Consensus 226 ~P~~~v~GNHD~~~ 239 (479)
.++++++||||+..
T Consensus 106 ~gv~av~GNHd~~~ 119 (284)
T COG1408 106 LGVFAVLGNHDYGV 119 (284)
T ss_pred CCEEEEeccccccc
Confidence 99999999999853
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-10 Score=105.07 Aligned_cols=106 Identities=23% Similarity=0.304 Sum_probs=69.1
Q ss_pred CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh---hcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC
Q 011680 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA---AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS 263 (479)
Q Consensus 187 ~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~ 263 (479)
+||+|+++||+++.+... + ..+|.+..+.+.++. ..+|++.++||||+..... .....-.+||.
T Consensus 42 ~PD~Vi~lGDL~D~G~~~--~-~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~----~~~~~~v~RF~------ 108 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIA--N-DDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE----DPIESKIRRFE------ 108 (195)
T ss_pred CCCEEEEeccccCCCCCC--C-HHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC----CcCHHHHHHHH------
Confidence 999999999999987732 2 334444333333332 3689999999999853211 01011122331
Q ss_pred CCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHH
Q 011680 264 KSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESW 343 (479)
Q Consensus 264 ~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l 343 (479)
.+ | |+++|.|+..... ..+..+
T Consensus 109 -----~~------------------------------------------F-i~lsH~P~~~~~~----------~~~~~~ 130 (195)
T cd08166 109 -----KY------------------------------------------F-IMLSHVPLLAEGG----------QALKHV 130 (195)
T ss_pred -----Hh------------------------------------------h-eeeeccccccccc----------HHHHHH
Confidence 00 0 9999999976432 155677
Q ss_pred HHHcCCcEEEEcccccceee
Q 011680 344 FVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 344 ~~~~~VdlvlsGH~H~yer~ 363 (479)
+.+++++++|+||.|.+...
T Consensus 131 ~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 131 VTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred HHhcCceEEEEcCccceeeE
Confidence 88899999999999987754
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.2e-10 Score=99.44 Aligned_cols=154 Identities=19% Similarity=0.269 Sum_probs=88.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccC
Q 011680 162 YTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFM 240 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~-~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 240 (479)
.||+++||+|..... .+.++.+ +++|+|+++||+++. .++.+.++.+ |++++.||||..
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------~~~~~~~~~~----~~~~v~GNHD~~-- 60 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------EEVLELLRDI----PVYVVRGNHDNW-- 60 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------HHHHHHHHHH----EEEEE--CCHST--
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------HHHHHHHhcC----CEEEEeCCcccc--
Confidence 489999999986332 1233333 389999999998752 3344444433 999999999942
Q ss_pred CCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEecc
Q 011680 241 PNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHV 320 (479)
Q Consensus 241 ~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~ 320 (479)
.+....... + +.+.+.. .-....|+++|.
T Consensus 61 ----------~~~~~~~~~----------~----------------------------~~~~~~~---~~~~~~i~~~H~ 89 (156)
T PF12850_consen 61 ----------AFPNENDEE----------Y----------------------------LLDALRL---TIDGFKILLSHG 89 (156)
T ss_dssp ----------HHHSEECTC----------S----------------------------SHSEEEE---EETTEEEEEESS
T ss_pred ----------cchhhhhcc----------c----------------------------cccceee---eecCCeEEEECC
Confidence 111110000 0 0001110 122468888998
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCC
Q 011680 321 PLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEG 400 (479)
Q Consensus 321 P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~ 400 (479)
+.+.... . .+.+..++...+++++++||.|..+... .+++.++..|+-+....
T Consensus 90 ~~~~~~~-----~---~~~~~~~~~~~~~~~~~~GH~H~~~~~~-------------------~~~~~~~~~Gs~~~~~~ 142 (156)
T PF12850_consen 90 HPYDVQW-----D---PAELREILSRENVDLVLHGHTHRPQVFK-------------------IGGIHVINPGSIGGPRH 142 (156)
T ss_dssp TSSSSTT-----T---HHHHHHHHHHTTSSEEEESSSSSEEEEE-------------------ETTEEEEEE-GSSS-SS
T ss_pred CCccccc-----C---hhhhhhhhcccCCCEEEcCCcccceEEE-------------------ECCEEEEECCcCCCCCC
Confidence 7765321 1 2345567779999999999999977653 24567788777664321
Q ss_pred CCCCCCCCCCCCceeeeCcccEEEEEEec
Q 011680 401 LAGRFLDPQPNYSAFREASYGHSTLEIKN 429 (479)
Q Consensus 401 ~~~~~~~~~p~~s~~~~~~~G~~~l~v~~ 429 (479)
.+ .-||++|++.+
T Consensus 143 ---------------~~-~~~~~i~~~~~ 155 (156)
T PF12850_consen 143 ---------------GD-QSGYAILDIED 155 (156)
T ss_dssp ---------------SS-SEEEEEEEETT
T ss_pred ---------------CC-CCEEEEEEEec
Confidence 01 35888988854
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.2e-09 Score=100.25 Aligned_cols=178 Identities=16% Similarity=0.117 Sum_probs=91.2
Q ss_pred eEEEEEecCCCCCChHHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCC
Q 011680 162 YTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 241 (479)
+|++++||+|..... .....+.+.+||+||++||+++. .. .+.+.+..+ ..|+++++||||.....
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~--------~~---~~~~~l~~l--~~p~~~V~GNHD~~~~~ 66 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE--------SV---QLVRAISSL--PLPKAVILGNHDAWYDA 66 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC--------hH---HHHHHHHhC--CCCeEEEcCCCcccccc
Confidence 589999999965332 22334444599999999999842 11 122333322 47999999999975432
Q ss_pred CCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC----------------CC--CCHHHHHHHHHHH
Q 011680 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP----------------YV--KYTPQWWWLREEL 303 (479)
Q Consensus 242 ~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~----------------~~--~~~~Q~~WL~~~L 303 (479)
.. ...+..+......-.. ..-.|-..++....+.++.+... |+ ..++-.+.+-+.+
T Consensus 67 ~~--~~k~~~l~~~L~~lg~----~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~ 140 (238)
T cd07397 67 TF--RKKGDRVQEQLELLGD----LHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAA 140 (238)
T ss_pred cc--cchHHHHHHHHHHhCC----cEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHh
Confidence 10 0011112211111100 00001112222223333333211 11 1123334444444
Q ss_pred hhcccCCCCeEEEEecccccccCCCC---------C----CCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 304 KKVDREKTPWLIVLMHVPLYSSNVVH---------Y----MEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 304 ~~~~~~~~~w~IV~~H~P~~~~~~~~---------~----~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
+.+ ....-.|++.|.++...++.. . -...++.+++..+-.+-.++++++||.|.--
T Consensus 141 ~~~--~~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l 209 (238)
T cd07397 141 KKA--PPDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRL 209 (238)
T ss_pred hhc--CCCCCeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCcc
Confidence 332 223336888999997654211 0 0245677777665544568999999999753
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-09 Score=99.00 Aligned_cols=56 Identities=30% Similarity=0.493 Sum_probs=36.7
Q ss_pred HHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-------hcCCeEEcCCCcccc
Q 011680 180 LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-------AYQPWIWSAGNHEIE 238 (479)
Q Consensus 180 l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-------~~~P~~~v~GNHD~~ 238 (479)
+..+.+. +||+||++||+++.... .. ...|.+..+.+..+. ...|+++++||||+.
T Consensus 37 ~~~~i~~~~pd~vi~lGDl~d~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 37 FKTALQRLKPDVVLFLGDLFDGGRI--AD-SEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHhcCCCEEEEeccccCCcEe--CC-HHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 3344434 99999999999986541 11 234554444444432 168999999999974
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.9e-09 Score=102.20 Aligned_cols=177 Identities=16% Similarity=0.155 Sum_probs=92.5
Q ss_pred EEEEEecCCCCCChHH----HHHHHHH--hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhc-CCeEEcCCCc
Q 011680 163 TFGIIGDLGQTYNSLS----TLKHYMQ--SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY-QPWIWSAGNH 235 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~----~l~~~~~--~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~-~P~~~v~GNH 235 (479)
+++++||+|.+..... .++.+.. .+||+|+++||+++.-...... ........+.++.+... +|++.++|||
T Consensus 2 ~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~-~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 2 PTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDP-SPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred cEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcC-CHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 7899999998754332 2233322 3899999999999741100001 12223445566666544 8999999999
Q ss_pred ccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEE
Q 011680 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLI 315 (479)
Q Consensus 236 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~I 315 (479)
|.... ..+.+...+.. -.....+++++.++++.-.... ...+..++++.+.+.. +|.+
T Consensus 81 D~~~~---------~~~~~~~g~~~------l~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~~r~------~~~~ 138 (241)
T PRK05340 81 DFLLG---------KRFAKAAGMTL------LPDPSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRKVRN------PWLQ 138 (241)
T ss_pred chhhh---------HHHHHhCCCEE------eCCcEEEEECCEEEEEECCccc-ccCCHHHHHHHHHHhC------HHHH
Confidence 96321 11111111100 0112346667777666654321 1123444445444443 1222
Q ss_pred EEecccccccCC------------CCC---CC-CHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 316 VLMHVPLYSSNV------------VHY---ME-GESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 316 V~~H~P~~~~~~------------~~~---~~-~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
.++|.+++.... ... .. .....+.+.+++.+++++++++||+|.-..
T Consensus 139 ~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 139 WLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 223333321100 000 00 001124577888899999999999997654
|
|
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=5e-09 Score=108.25 Aligned_cols=179 Identities=18% Similarity=0.181 Sum_probs=107.2
Q ss_pred HHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHH---HHHHHHHHHhhcCCeEEcCCCcccccCCCCC----ccc-
Q 011680 178 STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWD---SWGRFIEQSAAYQPWIWSAGNHEIEFMPNMG----EVI- 247 (479)
Q Consensus 178 ~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~---~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~----~~~- 247 (479)
.+|++|.++ ++|+|+++||++-.+.|.... +...+ ...+.+......+|+++++||||.-...... ...
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~-~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~ 277 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTE-EENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRH 277 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhH-HHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchh
Confidence 356666666 599999999999877654322 22222 2334455556789999999999974321110 000
Q ss_pred ----cccccccccc--CCcCCC-CCCCCceEE-EEcCeEEEEEeecCCCCC----------CCHHHHHHHHHHHhhcccC
Q 011680 248 ----PFKSYLHRIA--TPYTAS-KSTNPLWYA-IRRASAHIIVLSSYSPYV----------KYTPQWWWLREELKKVDRE 309 (479)
Q Consensus 248 ----~~~~~~~~f~--~P~~~~-~~~~~~yys-f~~g~v~fi~Lds~~~~~----------~~~~Q~~WL~~~L~~~~~~ 309 (479)
.|..+...|. +|.... ....+.+|. ..+++.++|+||+...+. .-..|++|+..+|.+++ +
T Consensus 278 ~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae-~ 356 (577)
T KOG3770|consen 278 SQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAE-S 356 (577)
T ss_pred hhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHH-h
Confidence 0111111111 332211 112344554 456889999999975422 23778999999999875 3
Q ss_pred CCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcccccceee
Q 011680 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAYERS 363 (479)
Q Consensus 310 ~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~--VdlvlsGH~H~yer~ 363 (479)
+..-+=|+.|.|+-... . .+.....+-.++.++. +...|.||.|.-+..
T Consensus 357 ~GekVhil~HIPpG~~~---c--~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 357 AGEKVHILGHIPPGDGV---C--LEGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred cCCEEEEEEeeCCCCcc---h--hhhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 44557788999984311 1 1122345555666664 556899999986643
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.3e-09 Score=95.75 Aligned_cols=48 Identities=23% Similarity=0.399 Sum_probs=33.4
Q ss_pred CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh---cCCeEEcCCCccc
Q 011680 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA---YQPWIWSAGNHEI 237 (479)
Q Consensus 187 ~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~---~~P~~~v~GNHD~ 237 (479)
+||+|+++||+++..... . ...|..+...+..+.+ ..|+++++||||.
T Consensus 38 ~pd~vv~~GDl~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~ 88 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWS--T-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDI 88 (156)
T ss_pred CCCEEEECCCCCCCCccC--C-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCc
Confidence 999999999999765411 1 3445554444444332 5799999999996
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.9e-09 Score=95.93 Aligned_cols=177 Identities=17% Similarity=0.212 Sum_probs=84.1
Q ss_pred CeEEEEEecCCCCCChHHHH-HHHHHhCCCEEEEcCcccccCCCCCCchhhhHH--------------------------
Q 011680 161 PYTFGIIGDLGQTYNSLSTL-KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWD-------------------------- 213 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l-~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~-------------------------- 213 (479)
+-++++++|.+...+..+.+ ..+....||+|+++||+.-... . ...|.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a----~-~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEA----R-SDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCH----H-HHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccch----h-hhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 35899999996543322222 2233349999999999986533 1 33333
Q ss_pred HHHHHHHHHhhcCCeEEcCCCcccccCCCCCccccc-ccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC-CCC
Q 011680 214 SWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF-KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP-YVK 291 (479)
Q Consensus 214 ~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~-~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~-~~~ 291 (479)
.|++.+.. ..+|.+++|||||-.. ..-+ .+|....-.|.-- . -..-+.+.-|...|+.+..+.. ...
T Consensus 80 ~ff~~L~~--~~~p~~~vPG~~Dap~------~~~lr~a~~~e~v~p~~~-~--vH~sf~~~~g~y~v~G~GGeI~~~~~ 148 (255)
T PF14582_consen 80 KFFRILGE--LGVPVFVVPGNMDAPE------RFFLREAYNAEIVTPHIH-N--VHESFFFWKGEYLVAGMGGEITDDQR 148 (255)
T ss_dssp HHHHHHHC--C-SEEEEE--TTS-SH------HHHHHHHHHCCCC-TTEE-E---CTCEEEETTTEEEEEE-SEEESSS-
T ss_pred HHHHHHHh--cCCcEEEecCCCCchH------HHHHHHHhccceecccee-e--eeeeecccCCcEEEEecCccccCCCc
Confidence 33333332 3789999999999410 0000 1222111122100 0 0012223345577777765321 110
Q ss_pred --------CHHHHHHHHHHHhhcccCCCCeEEEEecccc-cccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 292 --------YTPQWWWLREELKKVDREKTPWLIVLMHVPL-YSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 292 --------~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~-~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
.....+|..+.|..+ +..-+|+++|.|+ +..+..+.+ .+.+..++++++.+++||||.|--.
T Consensus 149 ~~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 149 EEEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp BCSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred cccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCCCccccc-----HHHHHHHHHhcCCcEEEecccccch
Confidence 022344555566664 3446788899999 444333322 3577889999999999999999654
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.6e-09 Score=93.04 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=40.0
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
|++++||+|... ..+..+.+. ++|.|+++||+++... ... +....|++.|.||||.
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~~~~~d~ii~~GD~~~~~~------~~~----------~~~~~~~~~V~GNhD~ 58 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALELFGDVDLIIHAGDVLYPGP------LNE----------LELKAPVIAVRGNCDG 58 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHHhcCCCEEEECCccccccc------cch----------hhcCCcEEEEeCCCCC
Confidence 589999999653 344444443 4999999999987644 111 2346799999999995
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.6e-08 Score=89.41 Aligned_cols=176 Identities=16% Similarity=0.156 Sum_probs=102.3
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-hcCCeEEcCCCcccc
Q 011680 161 PYTFGIIGDLGQTYNSLSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQPWIWSAGNHEIE 238 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~~ 238 (479)
.+|+++++|+|........+..+.+. ++|+++.+||++|..-- + ...-.+-. .++.+. ..+|+++++||-|-.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~---~-~~~~~~~~-~~e~l~~~~~~v~avpGNcD~~ 77 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFG---P-KEVAEELN-KLEALKELGIPVLAVPGNCDPP 77 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcC---c-hHHHHhhh-HHHHHHhcCCeEEEEcCCCChH
Confidence 57999999999876555555444444 99999999999943221 1 11111100 034444 478999999998842
Q ss_pred cCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCC--CC----CCCHHH-HHHHHHHHhhcccCCC
Q 011680 239 FMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS--PY----VKYTPQ-WWWLREELKKVDREKT 311 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~--~~----~~~~~Q-~~WL~~~L~~~~~~~~ 311 (479)
.- .... ....... .+ .+.+++++.|+.+.... .+ .-.+++ +.-|++-+++++ .
T Consensus 78 ~v--------~~~l-~~~~~~v------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~---~ 137 (226)
T COG2129 78 EV--------IDVL-KNAGVNV------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD---N 137 (226)
T ss_pred HH--------HHHH-Hhccccc------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc---C
Confidence 10 0011 1111110 01 45777888887754321 11 112333 344444454432 1
Q ss_pred CeEEEEecccccccCCCCCCCC--HHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 312 PWLIVLMHVPLYSSNVVHYMEG--ESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~~~~~~~--~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
.-+|+++|+|+|.....- ..+ -.-...+..++++.++.+.+|||.|-+.-
T Consensus 138 ~~~Il~~HaPP~gt~~d~-~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 138 PVNILLTHAPPYGTLLDT-PSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred cceEEEecCCCCCccccC-CCCccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 112999999999765542 111 11246778889999999999999998543
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.7e-09 Score=94.87 Aligned_cols=57 Identities=23% Similarity=0.338 Sum_probs=36.1
Q ss_pred HHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHH-HHHHHHHh-------------------hcCCeEEcCCCccc
Q 011680 179 TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSW-GRFIEQSA-------------------AYQPWIWSAGNHEI 237 (479)
Q Consensus 179 ~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~-~~~~~~l~-------------------~~~P~~~v~GNHD~ 237 (479)
++..+... +||.|+++||+.+. ++. . +.+|... .++.+.+. ..+|++.++||||+
T Consensus 35 ~~~~~~~~l~Pd~V~fLGDLfd~-~w~--~-D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDI 110 (193)
T cd08164 35 IVSMMQFWLKPDAVVVLGDLFSS-QWI--D-DEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDV 110 (193)
T ss_pred HHHHHHHhcCCCEEEEeccccCC-Ccc--c-HHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccC
Confidence 34444444 99999999999976 442 2 4445432 23322221 14789999999998
Q ss_pred cc
Q 011680 238 EF 239 (479)
Q Consensus 238 ~~ 239 (479)
.+
T Consensus 111 G~ 112 (193)
T cd08164 111 GY 112 (193)
T ss_pred CC
Confidence 54
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.84 E-value=7e-07 Score=81.52 Aligned_cols=166 Identities=16% Similarity=0.159 Sum_probs=94.3
Q ss_pred EEEEEecCCCCCCh---HHHHHHHHH-hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccc
Q 011680 163 TFGIIGDLGQTYNS---LSTLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 163 ~f~~~gD~~~~~~~---~~~l~~~~~-~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 238 (479)
+++++||+|.+... ...+.++.+ .++|.|+++||+++. . ..+.++.+ ..|++.|.||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~~---------~----~~~~l~~~--~~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCSK---------E----TYDYLKTI--APDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCCH---------H----HHHHHHhh--CCceEEEECCCCcc
Confidence 47899999965432 223444444 379999999999752 1 12233332 24799999999941
Q ss_pred cCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEe
Q 011680 239 FMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~ 318 (479)
+.+|. ...+++++ ++|.++
T Consensus 66 -----------------~~lp~---------~~~~~~~g-----------------------------------~~i~l~ 84 (178)
T cd07394 66 -----------------LNYPE---------TKVITVGQ-----------------------------------FKIGLI 84 (178)
T ss_pred -----------------ccCCC---------cEEEEECC-----------------------------------EEEEEE
Confidence 02331 11222222 456666
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCC
Q 011680 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQ 398 (479)
Q Consensus 319 H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~ 398 (479)
|--.+.... . .+.+..++.+.++|++++||+|.-.... .++..++-.|+.|.+
T Consensus 85 HG~~~~~~~-----~---~~~~~~~~~~~~~dvii~GHTH~p~~~~-------------------~~g~~viNPGSv~~~ 137 (178)
T cd07394 85 HGHQVVPWG-----D---PDSLAALQRQLDVDILISGHTHKFEAFE-------------------HEGKFFINPGSATGA 137 (178)
T ss_pred ECCcCCCCC-----C---HHHHHHHHHhcCCCEEEECCCCcceEEE-------------------ECCEEEEECCCCCCC
Confidence 632221110 1 1234445667889999999999754322 235677777887754
Q ss_pred CCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCC
Q 011680 399 EGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGN 444 (479)
Q Consensus 399 ~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~ 444 (479)
.... . . .....|++|++.++ ...+++++-.+++
T Consensus 138 ~~~~-~---~--------~~~~syail~~~~~-~~~~~~~~l~~~~ 170 (178)
T cd07394 138 FSPL-D---P--------NVIPSFVLMDIQGS-KVVTYVYQLIDGE 170 (178)
T ss_pred CCCC-C---C--------CCCCeEEEEEecCC-eEEEEEEEEECCc
Confidence 2110 0 0 11237788998554 4677777655555
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.6e-08 Score=95.24 Aligned_cols=175 Identities=17% Similarity=0.121 Sum_probs=89.0
Q ss_pred eEEEEEecCCCCC------ChH----HHHHHHHHhCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEE
Q 011680 162 YTFGIIGDLGQTY------NSL----STLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIW 230 (479)
Q Consensus 162 ~~f~~~gD~~~~~------~~~----~~l~~~~~~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~ 230 (479)
++|++++|+|... ... ..++++.+.++| +++.+||++...... .+......++.+..--.-+.
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~------~~~~~~~~~~~l~~~g~d~~ 74 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPS------TATKGEANIELMNALGYDAV 74 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccch------hccCCcHHHHHHHhcCCCEE
Confidence 5899999999543 222 334455555788 789999998765421 11111122222222235567
Q ss_pred cCCCcccccCCCCCcccccccccccccCCc-------CC---CCCCCCceEEEEcCeEE--EEEeecCCC--C-----CC
Q 011680 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPY-------TA---SKSTNPLWYAIRRASAH--IIVLSSYSP--Y-----VK 291 (479)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~-------~~---~~~~~~~yysf~~g~v~--fi~Lds~~~--~-----~~ 291 (479)
++||||++.... .+.........|. .. .......|..++.++++ |+.+.+... + ..
T Consensus 75 ~~GNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 75 TIGNHEFDYGLD-----ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred eeccccccccHH-----HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 889999864321 1111111111110 00 00111235567778755 444443221 0 00
Q ss_pred ---CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 292 ---YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 292 ---~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
.....+.+++..+. .+.+...+|++.|.+... . ..+...+ .++|++|+||.|..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~--------~----~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 150 GLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDD--------D----EELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred CceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccc--------h----HHHHhcC--CCccEEEcCCcCcccC
Confidence 01223334332222 125678999999988642 1 1111112 6899999999998654
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.3e-07 Score=90.11 Aligned_cols=73 Identities=21% Similarity=0.128 Sum_probs=46.4
Q ss_pred EEEecCCCCCChH----HHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cCCeEEcCCCccc
Q 011680 165 GIIGDLGQTYNSL----STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEI 237 (479)
Q Consensus 165 ~~~gD~~~~~~~~----~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~ 237 (479)
+++||+|.+.... ..++.+.+. +||+|+++||+++.-...... ....+.+.+.++.+.. ..|+++++||||.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~-~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~ 80 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDP-STLARSVAQAIRQVSDQGVPCYFMHGNRDF 80 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCC-CHHHHHHHHHHHHHHHCCCeEEEEcCCCch
Confidence 6899999875422 234444443 799999999999731100001 2222345556666654 5899999999996
Q ss_pred c
Q 011680 238 E 238 (479)
Q Consensus 238 ~ 238 (479)
.
T Consensus 81 ~ 81 (231)
T TIGR01854 81 L 81 (231)
T ss_pred h
Confidence 3
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.5e-07 Score=94.60 Aligned_cols=108 Identities=12% Similarity=0.079 Sum_probs=59.5
Q ss_pred CeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEE
Q 011680 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLT 391 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~ 391 (479)
.+.|++.|+........ ... -+.++ ..++|+|+.||.|.-+.. |.. .+....+|+
T Consensus 201 ~fnIlv~Hq~~~~~~~~-----~~i---pe~ll-p~~fDYValGHiH~~~~~-p~~---------------~~~~~~~V~ 255 (405)
T TIGR00583 201 WFNLLVLHQNHAAHTST-----SFL---PESFI-PDFFDLVIWGHEHECLPD-PVY---------------NPSDGFYVL 255 (405)
T ss_pred ceEEEEeCceecCCCCc-----ccC---chhhh-hccCcEEEeccccccccc-ccc---------------cCCCCceEE
Confidence 35799999986322111 011 12333 457999999999975432 111 122223444
Q ss_pred eCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEeC
Q 011680 392 VGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQ 456 (479)
Q Consensus 392 ~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~ 456 (479)
- +|+.+.. .+.+ -....-|+..|+|.. ....++++.-+...+.+..++.+...
T Consensus 256 y--pGS~v~t--Sf~e-------~E~~~Kgv~lVeI~~-~~~~~~~IpL~~vRpf~~~~i~l~~~ 308 (405)
T TIGR00583 256 Q--PGSTVAT--SLTP-------GEALPKHVFILNIKG-RKFASKPIPLQTVRPFVMKEILLDKV 308 (405)
T ss_pred E--CCCcccc--cccc-------cccCCCEEEEEEEcC-CeeEEEEeeCCCcccEEEEEEEhhhc
Confidence 1 2333321 1110 011246899999964 45788888765567777778877764
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.76 E-value=3e-08 Score=85.59 Aligned_cols=50 Identities=18% Similarity=0.129 Sum_probs=32.6
Q ss_pred eEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceee
Q 011680 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 313 w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~ 363 (479)
.+|+++|+|++........ ...-.+.+.+++.+++++++|+||+|.....
T Consensus 57 ~~Ilv~H~pp~~~~~~~~~-~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 57 VDILLTHAPPAGIGDGEDF-AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred cCEEEECCCCCcCcCcccc-cccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 3578889888643321100 1112456677888899999999999975543
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.4e-07 Score=84.36 Aligned_cols=61 Identities=16% Similarity=0.089 Sum_probs=40.9
Q ss_pred eEEEEEecCCCCCChHHHH-HHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNSLSTL-KHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l-~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||+|......+.+ +.+... ++|.|+++||++. .. ..+.++.+ ..|++.|.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~---------~~----~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS---------PF----VLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC---------HH----HHHHHHHh--CCceEEEccCCCc
Confidence 3799999999764433333 334444 8999999999982 11 22233322 4589999999994
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.3e-07 Score=89.05 Aligned_cols=183 Identities=14% Similarity=0.074 Sum_probs=90.7
Q ss_pred eEEEEEecCCCCC-------------Ch----HHHHHHHHHhCCCEEEE-cCcccccCCCCCCchh-----hhHHHHHHH
Q 011680 162 YTFGIIGDLGQTY-------------NS----LSTLKHYMQSGGQSVLF-LGDLSYADRYEYNDVG-----IRWDSWGRF 218 (479)
Q Consensus 162 ~~f~~~gD~~~~~-------------~~----~~~l~~~~~~~pD~vl~-~GDl~y~~~~~~~~~~-----~~~~~~~~~ 218 (479)
++|++++|+|... .. ...++++.+.+++.+++ +||++...... ++. .......+.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~--~~~~~~~~~~~~~~~~~ 78 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLA--DYYAKIEDGDPHPMIAA 78 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHH--HHhhhcccCCCChHHHH
Confidence 4788888887531 11 12334444447888776 99998754310 000 011122333
Q ss_pred HHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcC-------C-CCCCCCceEEEEcC-eEEEEEee--cCC
Q 011680 219 IEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT-------A-SKSTNPLWYAIRRA-SAHIIVLS--SYS 287 (479)
Q Consensus 219 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~-------~-~~~~~~~yysf~~g-~v~fi~Ld--s~~ 287 (479)
+..+ . +-+.++||||+++... .+.........|.- . .......|.-++.+ ++++-++. +..
T Consensus 79 ln~~--g-~d~~~lGNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~ 150 (277)
T cd07410 79 MNAL--G-YDAGTLGNHEFNYGLD-----YLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQ 150 (277)
T ss_pred HHhc--C-CCEEeecccCcccCHH-----HHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcc
Confidence 3332 2 3467889999864321 11111111112210 0 00112346667888 86554444 321
Q ss_pred C--CC-----------CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEE
Q 011680 288 P--YV-----------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIF 353 (479)
Q Consensus 288 ~--~~-----------~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~Vdlvl 353 (479)
. +. ...+..++..++|++ .++..+|+++|.+....... ....+ .....+.++ .+||++|
T Consensus 151 ~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~-~~~~~---~~~~~la~~~~~vD~Il 223 (277)
T cd07410 151 IPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEE-SLTGE---NAAYELAEEVPGIDAIL 223 (277)
T ss_pred cccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccc-ccCCc---cHHHHHHhcCCCCcEEE
Confidence 1 00 012234455555554 46789999999987543210 01111 112233444 5899999
Q ss_pred Ecccccce
Q 011680 354 AGHVHAYE 361 (479)
Q Consensus 354 sGH~H~ye 361 (479)
+||.|...
T Consensus 224 gGHsH~~~ 231 (277)
T cd07410 224 TGHQHRRF 231 (277)
T ss_pred eCCCcccc
Confidence 99999754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.8e-07 Score=82.28 Aligned_cols=155 Identities=24% Similarity=0.239 Sum_probs=83.3
Q ss_pred HHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCccccccccccc
Q 011680 178 STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHR 255 (479)
Q Consensus 178 ~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 255 (479)
++-++.... .=|.|++.||++.+...+ +-.+=++++..+ .---+.+.||||+.+... ...++.
T Consensus 32 kI~k~W~~~v~~eDiVllpGDiSWaM~l~------ea~~Dl~~i~~L--PG~K~m~rGNHDYWw~s~-------skl~n~ 96 (230)
T COG1768 32 KIKKHWRSKVSPEDIVLLPGDISWAMRLE------EAEEDLRFIGDL--PGTKYMIRGNHDYWWSSI-------SKLNNA 96 (230)
T ss_pred HHHHHHHhcCChhhEEEecccchhheech------hhhhhhhhhhcC--CCcEEEEecCCccccchH-------HHHHhh
Confidence 333444443 458999999999876521 111223444333 112477999999864311 111111
Q ss_pred ccCCcCCCCCCCCceE---EEEcCeEEEEEe---ecC-CCCCCCHHH--------HHHHHHHHhhcccCCCCeEEEEecc
Q 011680 256 IATPYTASKSTNPLWY---AIRRASAHIIVL---SSY-SPYVKYTPQ--------WWWLREELKKVDREKTPWLIVLMHV 320 (479)
Q Consensus 256 f~~P~~~~~~~~~~yy---sf~~g~v~fi~L---ds~-~~~~~~~~Q--------~~WL~~~L~~~~~~~~~w~IV~~H~ 320 (479)
+|.. .+| .|.++++.++.. ++. .++...++| +.-|+..+.++-++...-.|||.|.
T Consensus 97 --lp~~-------l~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HY 167 (230)
T COG1768 97 --LPPI-------LFYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHY 167 (230)
T ss_pred --cCch-------HhhhccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEec
Confidence 1110 111 144455444332 222 122223333 2334332222223455678999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 321 PLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 321 P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
|+++..... ..+.+++++++|+.++.||.|--.|-.
T Consensus 168 PP~s~~~t~--------~~~sevlee~rv~~~lyGHlHgv~~p~ 203 (230)
T COG1768 168 PPFSDDGTP--------GPFSEVLEEGRVSKCLYGHLHGVPRPN 203 (230)
T ss_pred CCCCCCCCC--------cchHHHHhhcceeeEEeeeccCCCCCC
Confidence 999765432 245567889999999999999888754
|
|
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.3e-07 Score=88.00 Aligned_cols=174 Identities=18% Similarity=0.205 Sum_probs=88.2
Q ss_pred eEEEEEecCCCCCC-------hHH----HHHHHHHhCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeE
Q 011680 162 YTFGIIGDLGQTYN-------SLS----TLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWI 229 (479)
Q Consensus 162 ~~f~~~gD~~~~~~-------~~~----~l~~~~~~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 229 (479)
++++.+.|.|.-.. ... .++++.+.+++ ++|.+||++...... + ..+.+...+.+..+ -.-+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~--~-~~~g~~~~~~l~~l---~~d~ 74 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS--T-ATKGKQMVPVLNAL---GVDL 74 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch--h-hcCCccHHHHHHhc---CCcE
Confidence 47788888873110 122 33444444677 999999998654311 1 11112233333332 2346
Q ss_pred EcCCCcccccCCCCCcccccccccccccCCcC----------CCCCCCCceEEEEcCeEE--EEEeecCCCC------C-
Q 011680 230 WSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT----------ASKSTNPLWYAIRRASAH--IIVLSSYSPY------V- 290 (479)
Q Consensus 230 ~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~----------~~~~~~~~yysf~~g~v~--fi~Lds~~~~------~- 290 (479)
.++||||++.... .+.........|.- ..-..-..|.-++.++++ ||.+.+.... .
T Consensus 75 ~~~GNHefd~g~~-----~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~ 149 (257)
T cd07406 75 ACFGNHEFDFGED-----QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPE 149 (257)
T ss_pred EeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCC
Confidence 7899999854321 11111111111110 000012457778888855 4555443211 0
Q ss_pred --CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 291 --KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 291 --~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
....-.+.+++.+++..+.++.-+|++.|.+... .. .+.++ .++|++|+||.|..+
T Consensus 150 ~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 150 YVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred cceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceEEecccceeE
Confidence 0122233344444332235788999999997521 11 12222 479999999999866
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.5e-06 Score=79.72 Aligned_cols=74 Identities=18% Similarity=0.188 Sum_probs=43.4
Q ss_pred eEEEEEecCCCCCChH-HHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNSL-STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~-~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||+|...... ..++.+.+.++|.++++||+++.+............+..+.++.+ ..+++.+.||||.
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCceEEEccCCcc
Confidence 3799999999653222 233344445899999999998643210000000112223333322 3589999999994
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.4e-07 Score=88.90 Aligned_cols=184 Identities=12% Similarity=0.011 Sum_probs=88.7
Q ss_pred EEEecCCCCCChH---HHHHHHHH----hCCCEEEEcCcccccCCCCCCchhhhHHH-HHHHHHHHhhcCCeEEcCCCcc
Q 011680 165 GIIGDLGQTYNSL---STLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQSAAYQPWIWSAGNHE 236 (479)
Q Consensus 165 ~~~gD~~~~~~~~---~~l~~~~~----~~pD~vl~~GDl~y~~~~~~~~~~~~~~~-~~~~~~~l~~~~P~~~v~GNHD 236 (479)
+++||+|.+.... ..+..+.+ .++|.++++||+++.-............. +...++......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 4789999875432 22333333 38999999999997422111010111111 2334444456789999999999
Q ss_pred cccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcc------cCC
Q 011680 237 IEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVD------REK 310 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~------~~~ 310 (479)
.... . .+......... ......+.+++.+++++-.... ........|+...+.... ...
T Consensus 81 ~~~~-------~--~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~HG~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (217)
T cd07398 81 FLLG-------D--FFAEELGLILL-----PDPLVHLELDGKRILLEHGDQF-DTDDRAYQLLRRLGRNPYDQLLFLNRP 145 (217)
T ss_pred HHHH-------h--HHHHHcCCEEe-----ccceEEEeeCCeEEEEECCCcC-chhHHHHHHHHHHhCcHHHHHHHhcch
Confidence 6421 0 11111100000 0112146778888888776532 233344444444322100 000
Q ss_pred CCeEEEEeccccccc-----CCCC-CCCCHHHHHHHHHHHHHcCCcEEEEcccccceee
Q 011680 311 TPWLIVLMHVPLYSS-----NVVH-YMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 311 ~~w~IV~~H~P~~~~-----~~~~-~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~ 363 (479)
..+..-+.......+ .... ........+.+..++.+++++++++||+|.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 146 LNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred HHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 000000000000000 0000 0012233556667778899999999999987654
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.6e-06 Score=82.87 Aligned_cols=156 Identities=16% Similarity=0.109 Sum_probs=77.7
Q ss_pred HHHHHHHh-CCCEE-EEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccc
Q 011680 179 TLKHYMQS-GGQSV-LFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRI 256 (479)
Q Consensus 179 ~l~~~~~~-~pD~v-l~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f 256 (479)
.++++.+. ++|.+ +.+||+....... . ........+.+. ..++.++.||||+++... .+....+.+
T Consensus 41 ~v~~~~~~~~~~~l~l~~GD~~~gs~~~--~-~~~g~~~~~~l~----~~g~da~~GNHefd~g~~-----~l~~~~~~~ 108 (264)
T cd07411 41 LIKRIRAERNPNTLLLDGGDTWQGSGEA--L-YTRGQAMVDALN----ALGVDAMVGHWEFTYGPE-----RVRELFGRL 108 (264)
T ss_pred HHHHHHHhcCCCeEEEeCCCccCCChHH--h-hcCChhHHHHHH----hhCCeEEecccccccCHH-----HHHHHHhhC
Confidence 34555555 78877 5699999664410 0 111122223332 355555559999864321 112122222
Q ss_pred cCCcCCC-------C-CCCCceEEEEcCeE--EEEEeecCCCCC-------C---CHHHHHHHHHHHhhcc-cCCCCeEE
Q 011680 257 ATPYTAS-------K-STNPLWYAIRRASA--HIIVLSSYSPYV-------K---YTPQWWWLREELKKVD-REKTPWLI 315 (479)
Q Consensus 257 ~~P~~~~-------~-~~~~~yysf~~g~v--~fi~Lds~~~~~-------~---~~~Q~~WL~~~L~~~~-~~~~~w~I 315 (479)
.+|.-.+ + ..-..|.-++.+++ -||.+.+..... . .....+.+++.+++.. ..++..+|
T Consensus 109 ~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI 188 (264)
T cd07411 109 NWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVV 188 (264)
T ss_pred CCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEE
Confidence 2221000 0 01123556778875 455555432100 0 1233445555433321 25678999
Q ss_pred EEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 316 VLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 316 V~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
++.|.+... .. .+.++ .+||++|+||.|...
T Consensus 189 ~l~H~g~~~--------~~-------~la~~~~~iDlilgGH~H~~~ 220 (264)
T cd07411 189 LLSHNGLPV--------DV-------ELAERVPGIDVILSGHTHERT 220 (264)
T ss_pred EEecCCchh--------hH-------HHHhcCCCCcEEEeCcccccc
Confidence 999987531 11 12222 579999999999643
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.9e-06 Score=83.32 Aligned_cols=182 Identities=18% Similarity=0.163 Sum_probs=96.4
Q ss_pred EEEEecCCCCCCh-HHHHHHHHHh---CCCEEEEcCcccccCCCCCCchh--------hhHHHHHHHHHHHh-hcCCeEE
Q 011680 164 FGIIGDLGQTYNS-LSTLKHYMQS---GGQSVLFLGDLSYADRYEYNDVG--------IRWDSWGRFIEQSA-AYQPWIW 230 (479)
Q Consensus 164 f~~~gD~~~~~~~-~~~l~~~~~~---~pD~vl~~GDl~y~~~~~~~~~~--------~~~~~~~~~~~~l~-~~~P~~~ 230 (479)
|+++||.|..-.. ...++.+.+. ++|++|++||+.-... ..+.+ ..+..|...+.... ..+|+++
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~--~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRN--EADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIF 78 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCC--cchhhhhccchhhhhhhhHHHHhcCCccCCeeEEE
Confidence 5789999864221 1223334332 7999999999953322 11100 12233333333322 3567799
Q ss_pred cCCCcccccCCCCCcccccccccccccCCcCCCCCCCCce-----EEEEcCeEEEEEeecCCC---CCC--------CHH
Q 011680 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLW-----YAIRRASAHIIVLSSYSP---YVK--------YTP 294 (479)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~y-----ysf~~g~v~fi~Lds~~~---~~~--------~~~ 294 (479)
+.||||.. ..+.. ++..+ ....+.+ ..+++++++|..|..... +.. .+.
T Consensus 79 i~GNHE~~-----------~~l~~---l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~ 143 (262)
T cd00844 79 IGGNHEAS-----------NYLWE---LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSED 143 (262)
T ss_pred ECCCCCCH-----------HHHHh---hcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHH
Confidence 99999941 11110 11100 0011222 235678899999986321 211 123
Q ss_pred HHHHHH-------HHHhhcccCCCCeEEEEecccccccCCCCCCC---------------CHHHHHHHHHHHHHcCCcEE
Q 011680 295 QWWWLR-------EELKKVDREKTPWLIVLMHVPLYSSNVVHYME---------------GESMRAVFESWFVHSRVDFI 352 (479)
Q Consensus 295 Q~~WL~-------~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~---------------~~~~r~~l~~l~~~~~Vdlv 352 (479)
++..+. ..|... ...--|+++|.|+.......... ...-...+..++.+.++..+
T Consensus 144 ~~rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryh 220 (262)
T cd00844 144 TKRSAYHVRNIEVFKLKQL---KQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYW 220 (262)
T ss_pred HHHHhhhhhHHHHHHHHhc---CCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEE
Confidence 333221 112221 12346999999997654321100 00113467788999999999
Q ss_pred EEccccc-ceeeee
Q 011680 353 FAGHVHA-YERSYR 365 (479)
Q Consensus 353 lsGH~H~-yer~~p 365 (479)
|+||.|. |++..|
T Consensus 221 f~gH~H~~f~~~~~ 234 (262)
T cd00844 221 FSAHLHVKFAALVP 234 (262)
T ss_pred EEecCCcccceecC
Confidence 9999998 776654
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.4e-06 Score=82.84 Aligned_cols=182 Identities=12% Similarity=0.100 Sum_probs=87.3
Q ss_pred eEEEEEecCCCCCC-------hHHHHH----HHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEE
Q 011680 162 YTFGIIGDLGQTYN-------SLSTLK----HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIW 230 (479)
Q Consensus 162 ~~f~~~gD~~~~~~-------~~~~l~----~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~ 230 (479)
++++.++|+|.... ....+. ++.+.+.+++|.+||++..... .. ........+.+..+ ... +.
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~--~~-~~~g~~~~~~ln~~--g~d-~~ 74 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI--SD-LDKGETIIKIMNAV--GYD-AV 74 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh--hh-hcCCcHHHHHHHhc--CCc-EE
Confidence 57899999986321 122233 3332257899999999865331 01 11111222222221 233 45
Q ss_pred cCCCcccccCCCCCcccccccccccccCCcCCC-------CC-CCCceEEEEcC-e--EEEEEeecCCC-C----C--CC
Q 011680 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS-------KS-TNPLWYAIRRA-S--AHIIVLSSYSP-Y----V--KY 292 (479)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-------~~-~~~~yysf~~g-~--v~fi~Lds~~~-~----~--~~ 292 (479)
++||||+++.. ..+..+...+.+|.-.+ +. .-..|.-++.+ + +-||.+-+... . . .+
T Consensus 75 ~~GNHefd~G~-----~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~ 149 (257)
T cd07408 75 TPGNHEFDYGL-----DRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKD 149 (257)
T ss_pred ccccccccCCH-----HHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCC
Confidence 78999986431 11222222222231100 00 01125556777 6 45565554311 0 0 00
Q ss_pred ---HHHHHHHHHH-HhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 293 ---TPQWWWLREE-LKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 293 ---~~Q~~WL~~~-L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
..-.+-+++. ..+..+.++.-+|+++|.+....... . . ...+.. .-.++|++|.||.|....
T Consensus 150 ~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~-~--~---~~~la~--~~~giDvIigGH~H~~~~ 215 (257)
T cd07408 150 VTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP-W--T---STELAA--NVTGIDLIIDGHSHTTIE 215 (257)
T ss_pred cEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC-c--c---HHHHHH--hCCCceEEEeCCCccccc
Confidence 1112223333 22222257889999999987543210 0 1 112211 124799999999997654
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.3e-06 Score=89.96 Aligned_cols=73 Identities=18% Similarity=0.066 Sum_probs=51.1
Q ss_pred eEEEEEecCCCCC-C---------hH----HHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-hcC
Q 011680 162 YTFGIIGDLGQTY-N---------SL----STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQ 226 (479)
Q Consensus 162 ~~f~~~gD~~~~~-~---------~~----~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-~~~ 226 (479)
+||++++|+|.+. . .. ..++.+.+.++||||++||+.+....+ ...-..+.++++.+. ..+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps----~~a~~~~~~~l~~l~~~~I 76 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPS----PRALKLFLEALRRLKDAGI 76 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCC----HHHHHHHHHHHHHhccCCC
Confidence 4899999999982 1 11 234445556999999999999876521 222234556666654 479
Q ss_pred CeEEcCCCcccc
Q 011680 227 PWIWSAGNHEIE 238 (479)
Q Consensus 227 P~~~v~GNHD~~ 238 (479)
|++++.||||..
T Consensus 77 pv~~I~GNHD~~ 88 (390)
T COG0420 77 PVVVIAGNHDSP 88 (390)
T ss_pred cEEEecCCCCch
Confidence 999999999963
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.44 E-value=4e-06 Score=82.67 Aligned_cols=64 Identities=16% Similarity=0.113 Sum_probs=35.8
Q ss_pred HHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH--cCCcEEEEccccccee
Q 011680 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH--SRVDFIFAGHVHAYER 362 (479)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~--~~VdlvlsGH~H~yer 362 (479)
+-+++.+++.+..+...+|+++|........... .+........++.+ .++|++|+||.|....
T Consensus 178 e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 178 EAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFAGHTHQAYN 243 (288)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEeCccCcccc
Confidence 4455544443325688999999988753222110 00111112233333 4799999999998653
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.8e-06 Score=86.78 Aligned_cols=116 Identities=16% Similarity=0.137 Sum_probs=74.4
Q ss_pred CCCeEEEEEecCCCCCCh-----HHHHH---------H----HHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHH
Q 011680 159 DAPYTFGIIGDLGQTYNS-----LSTLK---------H----YMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~~-----~~~l~---------~----~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~ 219 (479)
+..+|+++++|.|.-++. ...|+ + .... +||.++++||+.+++.+. + .++|.+..+-+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~--~-~eEf~~~~~Rf 122 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWA--G-DEEFKKRYERF 122 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccC--C-hHHHHHHHHHH
Confidence 567999999999876521 11111 1 1111 999999999999977653 2 55666543334
Q ss_pred HHHh---hcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC
Q 011680 220 EQSA---AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP 288 (479)
Q Consensus 220 ~~l~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~ 288 (479)
+.+. .++|.+.++||||+.+....- ......|...| ++...+|+.|+..|+++|++..
T Consensus 123 kkIf~~k~~~~~~~i~GNhDIGf~~~~~-~~~i~Rfe~~f----------g~~~r~f~v~~~tf~~~d~~~l 183 (410)
T KOG3662|consen 123 KKIFGRKGNIKVIYIAGNHDIGFGNELI-PEWIDRFESVF----------GPTERRFDVGNLTFVMFDSNAL 183 (410)
T ss_pred HHhhCCCCCCeeEEeCCccccccccccc-hhHHHHHHHhh----------cchhhhhccCCceeEEeeehhh
Confidence 4443 378999999999996542211 01112333333 2245679999999999998764
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=6.6e-06 Score=83.04 Aligned_cols=74 Identities=18% Similarity=0.094 Sum_probs=46.8
Q ss_pred eEEEEEecCCCCCCh---------HHHHHHH----HHhCCCEEEEcCcccccCCCCCCchhhhHHHHHH-HHHHHh-hcC
Q 011680 162 YTFGIIGDLGQTYNS---------LSTLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGR-FIEQSA-AYQ 226 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~---------~~~l~~~----~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~-~~~~l~-~~~ 226 (479)
+||+++||+|.+... ...++++ .+.+||+||++||+.+....+ . ........+ +++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~--~-~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAI--T-QNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCC--C-HHHHHHHHHHHHHHHHHCCC
Confidence 489999999987431 1234443 344999999999999764311 1 112222222 234443 368
Q ss_pred CeEEcCCCcccc
Q 011680 227 PWIWSAGNHEIE 238 (479)
Q Consensus 227 P~~~v~GNHD~~ 238 (479)
|++.++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999964
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.36 E-value=4.6e-06 Score=81.90 Aligned_cols=156 Identities=15% Similarity=0.133 Sum_probs=78.4
Q ss_pred HHHHHHhCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccC
Q 011680 180 LKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIAT 258 (479)
Q Consensus 180 l~~~~~~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~ 258 (479)
++++.+.+++ ++|.+||++...... . ..+.....+.+..+ ... +.++||||+++... .+........+
T Consensus 41 v~~~r~~~~~~l~ld~GD~~~gs~~~--~-~~~g~~~~~~ln~~--g~D-~~~lGNHefd~G~~-----~l~~~~~~~~~ 109 (281)
T cd07409 41 VKELRAENPNVLFLNAGDAFQGTLWY--T-LYKGNADAEFMNLL--GYD-AMTLGNHEFDDGVE-----GLAPFLNNLKF 109 (281)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCcchh--h-hcCChHHHHHHHhc--CCC-EEEeccccccCCHH-----HHHHHHHhCCC
Confidence 3444444666 566699998654311 1 11122223333322 333 55789999875421 11112111222
Q ss_pred CcCCC-----C------CCCCceEEEEcCeEE--EEEeecCCC--C-C--C---CHHHHHHHHHHHhhcccCCCCeEEEE
Q 011680 259 PYTAS-----K------STNPLWYAIRRASAH--IIVLSSYSP--Y-V--K---YTPQWWWLREELKKVDREKTPWLIVL 317 (479)
Q Consensus 259 P~~~~-----~------~~~~~yysf~~g~v~--fi~Lds~~~--~-~--~---~~~Q~~WL~~~L~~~~~~~~~w~IV~ 317 (479)
|.-.. . ..-..|.-++.++++ ||.+-+... . . . .....+.+++.+++.+..++.-+|++
T Consensus 110 p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l 189 (281)
T cd07409 110 PVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIAL 189 (281)
T ss_pred CEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 21100 0 011235667888855 455544221 0 0 1 12334556666655443567889999
Q ss_pred ecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 318 MHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 318 ~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
.|...-. . . .+.++ .++|++++||.|...
T Consensus 190 ~H~G~~~--------d----~---~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 190 SHSGYEV--------D----K---EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred eccCchh--------H----H---HHHHcCCCCcEEEeCCcCccc
Confidence 9987421 0 1 12222 479999999999854
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.5e-05 Score=75.17 Aligned_cols=169 Identities=12% Similarity=0.123 Sum_probs=88.0
Q ss_pred EEEEEecCCCCCCh---HHHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccc
Q 011680 163 TFGIIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 163 ~f~~~gD~~~~~~~---~~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 238 (479)
|++++||.=..... ...+..+.+. ++|++|..||++-.+. .. . ....+.+..+ .+- +.+.|||+++
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~-gl-~-----~~~~~~L~~~--G~D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGK-GI-T-----PKIAKELLSA--GVD-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCC-CC-C-----HHHHHHHHhc--CCC-EEEecccccC
Confidence 58899998332222 2334455444 8999999999987642 00 1 1122222221 333 4566999986
Q ss_pred cCCCCCcccccccccccc---cCCcCCC-CCCCCceEEEEcCeEEEEEeec--CCCCCCCHHHHHHHHHHHhhcccCCCC
Q 011680 239 FMPNMGEVIPFKSYLHRI---ATPYTAS-KSTNPLWYAIRRASAHIIVLSS--YSPYVKYTPQWWWLREELKKVDREKTP 312 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~f---~~P~~~~-~~~~~~yysf~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 312 (479)
.. ....+.... -.|.+-+ ......|+-++.+++++-+++- .........-++-+++.+++.+. +++
T Consensus 71 ~g-------el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D 142 (255)
T cd07382 71 KK-------EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EAD 142 (255)
T ss_pred cc-------hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCC
Confidence 43 111111111 0111111 1113347777888766555443 22211222224446666665432 578
Q ss_pred eEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 313 w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
.+||.+|.-.. ....++.. ...-+||+++.||+|..-
T Consensus 143 ~IIV~~H~g~t-----------sEk~ala~-~ldg~VdvIvGtHTHv~t 179 (255)
T cd07382 143 IIFVDFHAEAT-----------SEKIALGW-YLDGRVSAVVGTHTHVQT 179 (255)
T ss_pred EEEEEECCCCC-----------HHHHHHHH-hCCCCceEEEeCCCCccC
Confidence 99999998431 11122221 223469999999999754
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.2e-05 Score=93.58 Aligned_cols=190 Identities=15% Similarity=0.124 Sum_probs=93.7
Q ss_pred CCCeEEEEEecCCCCCChH----HHHHHHHHhCCCEEEE-cCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCC
Q 011680 159 DAPYTFGIIGDLGQTYNSL----STLKHYMQSGGQSVLF-LGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAG 233 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~~~----~~l~~~~~~~pD~vl~-~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~G 233 (479)
...++|++++|+|...... ..++++.+.+|+.+++ +||++..... .. ...+....+.+. .--.-+.++|
T Consensus 658 ~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~--~~-~~~g~~~~~~ln---~lg~d~~~~G 731 (1163)
T PRK09419 658 NWELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY--SN-LLKGLPVLKMMK---EMGYDASTFG 731 (1163)
T ss_pred ceEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch--hh-hcCChHHHHHHh---CcCCCEEEec
Confidence 3569999999999543222 2344455558887766 9999865431 01 111222223332 2233466999
Q ss_pred CcccccCCCC-----Cccc---ccccccc-cccCC-----cCCCCC---CCCceEEEEcCeEE--EEEeecCCC-C----
Q 011680 234 NHEIEFMPNM-----GEVI---PFKSYLH-RIATP-----YTASKS---TNPLWYAIRRASAH--IIVLSSYSP-Y---- 289 (479)
Q Consensus 234 NHD~~~~~~~-----~~~~---~~~~~~~-~f~~P-----~~~~~~---~~~~yysf~~g~v~--fi~Lds~~~-~---- 289 (479)
|||+++.... .... .-..|.. .|.+- ....+. ....|.-++.++++ ||.|-+... .
T Consensus 732 NHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p 811 (1163)
T PRK09419 732 NHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSP 811 (1163)
T ss_pred ccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCC
Confidence 9998654210 0000 0000000 01100 000000 11246667888754 555544311 0
Q ss_pred C--C---CHHHHHHHHHHHhhcc-cCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcccccce
Q 011680 290 V--K---YTPQWWWLREELKKVD-REKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYE 361 (479)
Q Consensus 290 ~--~---~~~Q~~WL~~~L~~~~-~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~ye 361 (479)
. . .....+.+++..++.+ ..+...+|+++|......... .++ ....|.++. +||++|.||.|..-
T Consensus 812 ~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~~-----~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 812 GNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GEI-----TGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred CCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--ccc-----HHHHHHHhCCCCCEEEeCCCCccc
Confidence 0 0 1222333444443332 156889999999987532211 111 122333333 69999999999753
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.26 E-value=8.6e-05 Score=72.80 Aligned_cols=184 Identities=14% Similarity=0.159 Sum_probs=92.2
Q ss_pred CCeEEEEEecCCCCCC--------------hHHHHHHHHH----hCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHHH
Q 011680 160 APYTFGIIGDLGQTYN--------------SLSTLKHYMQ----SGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIE 220 (479)
Q Consensus 160 ~~~~f~~~gD~~~~~~--------------~~~~l~~~~~----~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 220 (479)
..++|+.++|+|.... ....++.+.+ .+++ ++|..||.+....+.... ...+....++|.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~-~~~g~~~~~~mN 82 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDAS-PPPGSYSNPIFR 82 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeee-cCCChHHHHHHH
Confidence 4689999999985321 0122333332 2555 677899999765421110 112333333333
Q ss_pred HHhhcCCe-EEcCCCcccccCCCCCcccccccccccccCCc--------CCCCC---CCCceEEEEcC-eEE--EEEeec
Q 011680 221 QSAAYQPW-IWSAGNHEIEFMPNMGEVIPFKSYLHRIATPY--------TASKS---TNPLWYAIRRA-SAH--IIVLSS 285 (479)
Q Consensus 221 ~l~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~--------~~~~~---~~~~yysf~~g-~v~--fi~Lds 285 (479)
.+++ .+++||||++..... ...+..+......|. .+... ....|.-++.+ +++ ||.|-+
T Consensus 83 ----~mgyDa~tlGNHEFd~g~~~--l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt 156 (282)
T cd07407 83 ----MMPYDLLTIGNHELYNYEVA--DDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLF 156 (282)
T ss_pred ----hcCCcEEeecccccCccccH--HHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEec
Confidence 3343 679999998532210 000011111111121 00000 11236666776 655 555544
Q ss_pred CCC-CCC------C--HHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCc-EEEE
Q 011680 286 YSP-YVK------Y--TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVD-FIFA 354 (479)
Q Consensus 286 ~~~-~~~------~--~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~Vd-lvls 354 (479)
... ... . ..+.+|+.+.|++ .++.-+|+++|....... + ..+....+.++. ++| ++|.
T Consensus 157 ~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~~la~~~~~id~~Ii~ 225 (282)
T cd07407 157 DFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHDAIRKIFPDTPIQFLG 225 (282)
T ss_pred ccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHHHHHHhCCCCCEEEEe
Confidence 321 001 1 2233488888875 468899999999874321 1 111122233344 567 7999
Q ss_pred cccccce
Q 011680 355 GHVHAYE 361 (479)
Q Consensus 355 GH~H~ye 361 (479)
||.|...
T Consensus 226 GHsH~~~ 232 (282)
T cd07407 226 GHSHVRD 232 (282)
T ss_pred CCccccc
Confidence 9999753
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.9e-05 Score=77.70 Aligned_cols=187 Identities=15% Similarity=0.062 Sum_probs=86.1
Q ss_pred eEEEEEecCCCCCC-------h----HHHHHHHHHh----C-CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhc
Q 011680 162 YTFGIIGDLGQTYN-------S----LSTLKHYMQS----G-GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY 225 (479)
Q Consensus 162 ~~f~~~gD~~~~~~-------~----~~~l~~~~~~----~-pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~ 225 (479)
++++.++|+|..-. . ...++++.+. + .-++|.+||+....... . ........+.|..+ .
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~--~-~~~g~~~~~~~n~~--g 75 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPES--D-LQDAEPDFRGMNLV--G 75 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhH--H-hcCcchHHHHHHhh--C
Confidence 47888899876421 1 1234444432 2 34899999988543210 0 11111112233322 2
Q ss_pred CCeEEcCCCcccccCCCCCcccccccccccccCCcCC------CC-CCCCceEEEEcCeEEE--EEeecCCC-C--C---
Q 011680 226 QPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA------SK-STNPLWYAIRRASAHI--IVLSSYSP-Y--V--- 290 (479)
Q Consensus 226 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~------~~-~~~~~yysf~~g~v~f--i~Lds~~~-~--~--- 290 (479)
. =..++||||+++... .+........+|.-. .+ ..-..|.-++.+++++ |.+-+... . .
T Consensus 76 ~-Da~~~GNHEfD~G~~-----~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~ 149 (285)
T cd07405 76 Y-DAMAVGNHEFDNPLE-----VLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAY 149 (285)
T ss_pred C-cEEeecccccccCHH-----HHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCC
Confidence 2 245779999875421 111111111112100 00 0112366677887654 44443211 0 0
Q ss_pred -CC---HHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 291 -KY---TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 291 -~~---~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
.+ ....+=+++.+++.+..++.-+|+++|........... .......+...+...++|++|.||.|...
T Consensus 150 ~~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~~--~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 150 FEGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHGS--NAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccccc--cCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 01 11222222222222214678999999998753221110 00111122222223589999999999855
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.9e-05 Score=83.60 Aligned_cols=80 Identities=18% Similarity=0.186 Sum_probs=52.0
Q ss_pred CCCeEEEEEecCCCCCCh--HHH----HHHHH---------HhCCCEEEEcCcccccCC-CCCCc-------hhhhHHHH
Q 011680 159 DAPYTFGIIGDLGQTYNS--LST----LKHYM---------QSGGQSVLFLGDLSYADR-YEYND-------VGIRWDSW 215 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~~--~~~----l~~~~---------~~~pD~vl~~GDl~y~~~-~~~~~-------~~~~~~~~ 215 (479)
..+.++++++|+|.+... ... ++.+. ..+++.+|++||+++..+ ++... ....++.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 456899999999987542 111 22333 337999999999997532 11110 01123345
Q ss_pred HHHHHHHhhcCCeEEcCCCcccc
Q 011680 216 GRFIEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 216 ~~~~~~l~~~~P~~~v~GNHD~~ 238 (479)
.+++..+...+|++.++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 56666666788999999999963
|
|
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00013 Score=70.47 Aligned_cols=195 Identities=18% Similarity=0.115 Sum_probs=102.7
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~---~~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||.-..... ...+..+.+. ++||+|..||++-.+. ... . ...+.+.. ..+-++.+ |||++
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~--Gi~-~----~~~~~L~~--~GvDviT~-GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGK--GLT-L----KIYEFLKQ--SGVNYITM-GNHTW 70 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCC--CCC-H----HHHHHHHh--cCCCEEEc-cchhc
Confidence 379999998322111 2334555554 8999999999985531 001 1 11222221 24555555 99998
Q ss_pred ccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecC--CCCCC--CHHHHHHHHHHHhhcccCCCCe
Q 011680 238 EFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSY--SPYVK--YTPQWWWLREELKKVDREKTPW 313 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~--~~~~~--~~~Q~~WL~~~L~~~~~~~~~w 313 (479)
+....................|.. ..+..|..++.++..+-+++-. ..... ...-++-+++.+++.+ .+++.
T Consensus 71 Dkge~~~~i~~~~~~lrpanyp~~---~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk-~~~d~ 146 (266)
T TIGR00282 71 FQKLILDVVINQKDLVRPLNFDTS---FAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLK-KDCDL 146 (266)
T ss_pred cCcHHHHHHhccccccccCCCCCC---CCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhh-cCCCE
Confidence 643100000000011111123321 1233466677777666555532 11111 1222333455555433 24779
Q ss_pred EEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEE-e
Q 011680 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLT-V 392 (479)
Q Consensus 314 ~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~-~ 392 (479)
+||.+|.--- .. +.....+.+.+|++|+.-|.|..---.++ -++|+-||+ +
T Consensus 147 IIVd~Haeat-----------sE-K~a~~~~ldg~vsaVvGtHtHV~TaD~~i----------------l~~gtayitD~ 198 (266)
T TIGR00282 147 IFVDFHAETT-----------SE-KNAFGMAFDGYVTAVVGTHTHVPTADLRI----------------LPKGTAYITDV 198 (266)
T ss_pred EEEEeCCCCH-----------HH-HHHHHHHhCCCccEEEeCCCCCCCCccee----------------CCCCCEEEecC
Confidence 9999997531 12 34456677889999999999975432222 157888988 3
Q ss_pred CCCCCC
Q 011680 393 GDGGNQ 398 (479)
Q Consensus 393 G~gG~~ 398 (479)
|--|..
T Consensus 199 Gm~G~~ 204 (266)
T TIGR00282 199 GMTGPF 204 (266)
T ss_pred CcccCc
Confidence 555544
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00011 Score=66.20 Aligned_cols=62 Identities=18% Similarity=0.088 Sum_probs=41.7
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~-~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.+++++||+|..... ....+.....++|+|||+||.+.... ... ++.. -..++++|.||.|.
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~------~~~-------l~~~-~~~~i~~V~GN~D~ 64 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFT------LDA-------LEGG-LAAKLIAVRGNCDG 64 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccc------hHH-------hhcc-cccceEEEEccCCC
Confidence 589999999987532 22223333349999999999997644 111 1110 14689999999996
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.12 E-value=8e-06 Score=78.90 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=49.0
Q ss_pred eEEEEEecCCCCCCh---------HHHHHHH----HHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-c-C
Q 011680 162 YTFGIIGDLGQTYNS---------LSTLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-Y-Q 226 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~---------~~~l~~~----~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~-~ 226 (479)
+||++++|+|.+... ...++.+ .+.++|+||++||+++.... . ......+.+.++.+.. . +
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p---~-~~~~~~~~~~l~~l~~~~~i 76 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANP---P-AEAQELFNAFFRNLSDANPI 76 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCC---C-HHHHHHHHHHHHHHHhcCCc
Confidence 489999999986431 1233333 33489999999999986541 1 2222334556666543 3 8
Q ss_pred CeEEcCCCcccc
Q 011680 227 PWIWSAGNHEIE 238 (479)
Q Consensus 227 P~~~v~GNHD~~ 238 (479)
|+++++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (253)
T TIGR00619 77 PIVVISGNHDSA 88 (253)
T ss_pred eEEEEccCCCCh
Confidence 999999999963
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.09 E-value=4.4e-05 Score=81.59 Aligned_cols=188 Identities=15% Similarity=0.128 Sum_probs=99.6
Q ss_pred CCCCCeEEEEEecCCCCCC------------hHH----HHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHH
Q 011680 157 HPDAPYTFGIIGDLGQTYN------------SLS----TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (479)
Q Consensus 157 ~~~~~~~f~~~gD~~~~~~------------~~~----~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~ 219 (479)
.....++|+...|+|..-. ... .++++.+. +..++|.+||++...... ++........+.|
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~--~~~~~g~~~~~~m 99 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLS--DYLTKGEPTVDLL 99 (517)
T ss_pred cCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccc--ccccCCChHHHHH
Confidence 3457899999999987532 111 22334444 557899999999874421 1112222223333
Q ss_pred HHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCc-------C-C-CCCCCCceEEEEcCeEE--EEEeecCC-
Q 011680 220 EQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPY-------T-A-SKSTNPLWYAIRRASAH--IIVLSSYS- 287 (479)
Q Consensus 220 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~-------~-~-~~~~~~~yysf~~g~v~--fi~Lds~~- 287 (479)
..+ -.=+.++||||+++..+ .+..+......|. . . .......|.-++.++++ +|.+.+..
T Consensus 100 N~m---~yDa~tiGNHEFd~g~~-----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~ 171 (517)
T COG0737 100 NAL---GYDAMTLGNHEFDYGLE-----ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTI 171 (517)
T ss_pred hhc---CCcEEeecccccccCHH-----HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcc
Confidence 322 22367999999965421 1112222222221 0 0 01112457788888854 56655421
Q ss_pred -CCC--------CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccc
Q 011680 288 -PYV--------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (479)
Q Consensus 288 -~~~--------~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H 358 (479)
.+. ......+++++.+.+....++.-+|+++|.+............. ...... .++|+++.||.|
T Consensus 172 ~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~-~~~~~~-----~~iD~i~~GH~H 245 (517)
T COG0737 172 PTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPG-DVDVAV-----PGIDLIIGGHSH 245 (517)
T ss_pred cccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccccc-cccccc-----cCcceEeccCCc
Confidence 111 11345566766666654344788999999998654322111000 000000 449999999999
Q ss_pred cc
Q 011680 359 AY 360 (479)
Q Consensus 359 ~y 360 (479)
.+
T Consensus 246 ~~ 247 (517)
T COG0737 246 TV 247 (517)
T ss_pred cc
Confidence 64
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.08 E-value=6.6e-06 Score=74.40 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=39.1
Q ss_pred EEEecCCCCCCh----------------HHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC
Q 011680 165 GIIGDLGQTYNS----------------LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (479)
Q Consensus 165 ~~~gD~~~~~~~----------------~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~ 226 (479)
.+++|+|.+... ...++.+.+. ++|.|+++||++.... ...+ .+.++.+ ..
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~------~~~~---~~~l~~~--~~ 70 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGK------AGTE---LELLSRL--NG 70 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCC------hHHH---HHHHHhC--CC
Confidence 367888876532 1123333333 7899999999997644 2221 2333332 46
Q ss_pred CeEEcCCCccc
Q 011680 227 PWIWSAGNHEI 237 (479)
Q Consensus 227 P~~~v~GNHD~ 237 (479)
|++.++||||.
T Consensus 71 ~~~~v~GNHD~ 81 (168)
T cd07390 71 RKHLIKGNHDS 81 (168)
T ss_pred CeEEEeCCCCc
Confidence 89999999995
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.05 E-value=1e-05 Score=75.35 Aligned_cols=67 Identities=15% Similarity=0.120 Sum_probs=42.1
Q ss_pred EEecCCCCCChHH---HHHHHHHh---CCCEEEEcCcccccCCCCCCchhhhHHHH----HHHHHHHh-hcCCeEEcCCC
Q 011680 166 IIGDLGQTYNSLS---TLKHYMQS---GGQSVLFLGDLSYADRYEYNDVGIRWDSW----GRFIEQSA-AYQPWIWSAGN 234 (479)
Q Consensus 166 ~~gD~~~~~~~~~---~l~~~~~~---~pD~vl~~GDl~y~~~~~~~~~~~~~~~~----~~~~~~l~-~~~P~~~v~GN 234 (479)
++||.|.+..... .+-..++. +.|.+.++||+++.-. . ...|.+. ...+..+. +..|++.++||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~--g---~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN 76 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWI--G---DDEPPQLHRQVAQKLLRLARKGTRVYYIHGN 76 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhh--c---CCcccHHHHHHHHHHHHHHhcCCeEEEecCc
Confidence 6899999854332 23333333 5599999999997522 1 2233333 23333333 46899999999
Q ss_pred ccc
Q 011680 235 HEI 237 (479)
Q Consensus 235 HD~ 237 (479)
||.
T Consensus 77 ~Df 79 (237)
T COG2908 77 HDF 79 (237)
T ss_pred hHH
Confidence 995
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.1e-05 Score=73.66 Aligned_cols=63 Identities=24% Similarity=0.269 Sum_probs=40.3
Q ss_pred EEEecCCCCCChHHHHHHHHHh------------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-----hcCC
Q 011680 165 GIIGDLGQTYNSLSTLKHYMQS------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-----AYQP 227 (479)
Q Consensus 165 ~~~gD~~~~~~~~~~l~~~~~~------------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-----~~~P 227 (479)
+++||+|.. ...+.++++. +.|.++++||+++.+. + . .+..+.+..+. ...+
T Consensus 1 ~vi~DIHG~---~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~----~-~---~~vl~~l~~l~~~~~~~~~~ 69 (208)
T cd07425 1 VAIGDLHGD---LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGP----D-V---IEILWLLYKLEQEAAKAGGK 69 (208)
T ss_pred CEEeCccCC---HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCc----C-H---HHHHHHHHHHHHHHHhcCCe
Confidence 379999866 3444444432 5799999999998755 2 1 12223333222 3468
Q ss_pred eEEcCCCcccc
Q 011680 228 WIWSAGNHEIE 238 (479)
Q Consensus 228 ~~~v~GNHD~~ 238 (479)
++++.||||..
T Consensus 70 v~~l~GNHE~~ 80 (208)
T cd07425 70 VHFLLGNHELM 80 (208)
T ss_pred EEEeeCCCcHH
Confidence 99999999963
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00011 Score=79.05 Aligned_cols=190 Identities=14% Similarity=0.085 Sum_probs=89.0
Q ss_pred CCCeEEEEEecCCCCCC-------hH----HHHHHHHHh----C-CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHH
Q 011680 159 DAPYTFGIIGDLGQTYN-------SL----STLKHYMQS----G-GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS 222 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~-------~~----~~l~~~~~~----~-pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l 222 (479)
...++|+.++|+|.... .. ..++++.+. + .-++|.+||+...... .. ........++|..+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~--s~-~~~g~~~i~~mN~~ 108 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE--SD-LQDAEPDFRGMNLI 108 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh--hh-hcCCchhHHHHhcC
Confidence 46799999999987532 11 223334321 2 3588999998764321 01 01111112222221
Q ss_pred hhcCCeEEcCCCcccccCCCCCcccccccccccccCCcC-------CCC-CCCCceEEEEcCeEE--EEEeecCCC--C-
Q 011680 223 AAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT-------ASK-STNPLWYAIRRASAH--IIVLSSYSP--Y- 289 (479)
Q Consensus 223 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~-------~~~-~~~~~yysf~~g~v~--fi~Lds~~~--~- 289 (479)
. .=+.++||||+++... .+..+......|.- ..+ ..-..|.-++.++++ ||.+-+... +
T Consensus 109 --g-~Da~tlGNHEFD~G~~-----~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 109 --G-YDAMAVGNHEFDNPLS-----VLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred --C-CCEEcccccccCcCHH-----HHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 2 2356789999976422 11111111111210 000 011236667888855 555543211 1
Q ss_pred CC-------CHHHHHHHHHHHhhccc-CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 290 VK-------YTPQWWWLREELKKVDR-EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 290 ~~-------~~~Q~~WL~~~L~~~~~-~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
.. .....+-+++..++... .+..-+|+++|........... ..... ..+..-+...+||++|.||.|..-
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~~-~~~~d-~~la~~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHGS-NAPGD-VEMARSLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccCC-CCccH-HHHHHhCCccCceEEEeCCCCccc
Confidence 00 11122223333333221 4688999999998753221100 00000 112121222379999999999753
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.7e-05 Score=80.33 Aligned_cols=73 Identities=15% Similarity=0.110 Sum_probs=47.0
Q ss_pred eEEEEEecCCCCCCh---------HHHHHH----HHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cCC
Q 011680 162 YTFGIIGDLGQTYNS---------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQP 227 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~---------~~~l~~----~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~P 227 (479)
+||++++|+|.+... ...++. +.+.+||+||++||+.+.... . ......+.+++..+.. .+|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p---~-~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSP---P-SYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCC---c-HHHHHHHHHHHHHHHhcCCc
Confidence 489999999986321 112333 334499999999999976441 1 1111233445555443 589
Q ss_pred eEEcCCCcccc
Q 011680 228 WIWSAGNHEIE 238 (479)
Q Consensus 228 ~~~v~GNHD~~ 238 (479)
+++++||||..
T Consensus 77 v~~I~GNHD~~ 87 (407)
T PRK10966 77 LVVLAGNHDSV 87 (407)
T ss_pred EEEEcCCCCCh
Confidence 99999999963
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0003 Score=75.61 Aligned_cols=152 Identities=18% Similarity=0.141 Sum_probs=74.4
Q ss_pred HHHHHhC-CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCC
Q 011680 181 KHYMQSG-GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATP 259 (479)
Q Consensus 181 ~~~~~~~-pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P 259 (479)
+++.+.. .-++|.+||++....+. . ......-.++|. .---=+.++||||+++... .+..+.....+|
T Consensus 42 ~~~r~~~~n~l~ldaGD~~~gs~~~--~-~~~g~~~i~~~N---~~g~Da~~lGNHEFd~G~~-----~l~~~~~~~~fp 110 (550)
T TIGR01530 42 NKLRAESKNALVLHAGDAIIGTLYF--T-LFGGRADAALMN---AAGFDFFTLGNHEFDAGNE-----GLKEFLEPLEIP 110 (550)
T ss_pred HHHHhhCCCeEEEECCCCCCCccch--h-hcCCHHHHHHHh---ccCCCEEEeccccccCCHH-----HHHHHHHhCCCC
Confidence 3444333 35888999998654311 1 111111122222 1223467999999875421 122221111222
Q ss_pred cCC--------CC--CCCCceEEEEcCe--EEEEEeecCCC-C---CCC-----HHHHHHHH---HHHhhcccCCCCeEE
Q 011680 260 YTA--------SK--STNPLWYAIRRAS--AHIIVLSSYSP-Y---VKY-----TPQWWWLR---EELKKVDREKTPWLI 315 (479)
Q Consensus 260 ~~~--------~~--~~~~~yysf~~g~--v~fi~Lds~~~-~---~~~-----~~Q~~WL~---~~L~~~~~~~~~w~I 315 (479)
.-. .. ..-..|.-++.++ +-||.|.+... . ..+ ....+=++ +.|++ .+..-+|
T Consensus 111 ~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~---~g~D~II 187 (550)
T TIGR01530 111 VLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQ---QGINKII 187 (550)
T ss_pred EEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHh---CCCCEEE
Confidence 100 00 0112466677787 55677754211 0 111 11122222 34444 4678899
Q ss_pred EEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 316 VLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 316 V~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
+++|..... . ..+.++ .+||++|+||+|.+-
T Consensus 188 ~lsH~g~~~--------d-------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 188 LLSHAGFEK--------N-------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred EEecCCcHH--------H-------HHHHhcCCCCCEEEeCCCCccc
Confidence 999986421 1 122333 379999999999854
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00043 Score=68.95 Aligned_cols=39 Identities=23% Similarity=0.220 Sum_probs=26.3
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcccccce
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYE 361 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~ye 361 (479)
.+..-+|+++|..-+. .+ ..+.++. ++|++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~~~---------~d-----~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS---------IE-----QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc---------hH-----HHHHhcCCCCCEEEeCCCCccC
Confidence 4678899999984211 01 1234443 79999999999754
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.64 E-value=7.8e-05 Score=67.63 Aligned_cols=48 Identities=23% Similarity=0.243 Sum_probs=31.0
Q ss_pred hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 186 SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 186 ~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.+||.++++||+++.... .. ...+.... .+......+|+++++||||.
T Consensus 40 ~~~d~lii~GDl~~~~~~--~~-~~~~~~~~-~~~~~~~~~~v~~i~GNHD~ 87 (172)
T cd07391 40 YGPERLIILGDLKHSFGG--LS-RQEFEEVA-FLRLLAKDVDVILIRGNHDG 87 (172)
T ss_pred cCCCEEEEeCcccccccc--cC-HHHHHHHH-HHHhccCCCeEEEEcccCcc
Confidence 399999999999976431 11 11222211 23333457899999999995
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00015 Score=64.00 Aligned_cols=62 Identities=16% Similarity=0.230 Sum_probs=37.9
Q ss_pred EEEecCCCCCChHHHHHHHH---Hh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHH-HhhcCCeEEcCCCcc
Q 011680 165 GIIGDLGQTYNSLSTLKHYM---QS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ-SAAYQPWIWSAGNHE 236 (479)
Q Consensus 165 ~~~gD~~~~~~~~~~l~~~~---~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~-l~~~~P~~~v~GNHD 236 (479)
+++||.+.. ....++++. +. +.|++|++||+.-... + . +.|...+.. ....+|.|++-|||+
T Consensus 1 LV~G~~~G~--l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~----~-~---~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGR--LKALFEKVNTINKKKGPFDALLCVGDFFGDDE----D-D---EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCcc--HHHHHHHHHHHhcccCCeeEEEEecCccCCcc----c-h---hhHHHHhcCCccCCCCEEEECCCCC
Confidence 367888643 334444443 22 7899999999986544 2 2 233333322 234678899999996
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0024 Score=70.97 Aligned_cols=59 Identities=20% Similarity=0.133 Sum_probs=33.4
Q ss_pred HHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccc
Q 011680 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (479)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~y 360 (479)
+.+++...+.+..+++-+|++.|..+.........++.. ..+..--+||++|.||.|..
T Consensus 296 eaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En~~-----~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 296 EAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEENVG-----YQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccchh-----hHHhcCCCCCEEEECCCCCc
Confidence 334443333322568899999999874322111111111 12222357999999999984
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0004 Score=65.74 Aligned_cols=69 Identities=23% Similarity=0.431 Sum_probs=47.0
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHHHH----hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh
Q 011680 162 YTFGIIGDLGQTYNS--------------LSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~--------------~~~l~~~~~----~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~ 223 (479)
-+.++++|+|.+... .++++++.+ .+||.+|++||+..... . ...+..+.+.++.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~----~-~~~~~~~~~~l~~~- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK----K-GLEWRFIREFIEVT- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC----C-hHHHHHHHHHHHhc-
Confidence 468899999987431 134555443 28999999999997654 1 13444444555443
Q ss_pred hcCCeEEcCCCccc
Q 011680 224 AYQPWIWSAGNHEI 237 (479)
Q Consensus 224 ~~~P~~~v~GNHD~ 237 (479)
..+++.++||||.
T Consensus 89 -~~~v~~V~GNHD~ 101 (225)
T TIGR00024 89 -FRDLILIRGNHDA 101 (225)
T ss_pred -CCcEEEECCCCCC
Confidence 3599999999994
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0024 Score=55.36 Aligned_cols=65 Identities=22% Similarity=0.226 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCCh--------------HHHHHHHHHh-C-CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC
Q 011680 163 TFGIIGDLGQTYNS--------------LSTLKHYMQS-G-GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (479)
Q Consensus 163 ~f~~~gD~~~~~~~--------------~~~l~~~~~~-~-pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~ 226 (479)
.+.++||+|.+... ...+..+.+. + =|.+.++||++-... . -....+.++.|. -
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n------~--~~~a~~IlerLn--G 74 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGAN------R--ERAAGLILERLN--G 74 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccc------h--hhHHHHHHHHcC--C
Confidence 46688999886431 1234444444 4 479999999996543 1 233455566653 3
Q ss_pred CeEEcCCCccc
Q 011680 227 PWIWSAGNHEI 237 (479)
Q Consensus 227 P~~~v~GNHD~ 237 (479)
-...|+||||-
T Consensus 75 rkhlv~GNhDk 85 (186)
T COG4186 75 RKHLVPGNHDK 85 (186)
T ss_pred cEEEeeCCCCC
Confidence 34889999993
|
|
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00077 Score=65.89 Aligned_cols=176 Identities=20% Similarity=0.226 Sum_probs=99.5
Q ss_pred eEEEEEecCCCCCC-hHHHHHHHHHh---CCCEEEEcCcccccCC---CCCCchhhhHHHHHHHHH----HHhhcCCeEE
Q 011680 162 YTFGIIGDLGQTYN-SLSTLKHYMQS---GGQSVLFLGDLSYADR---YEYNDVGIRWDSWGRFIE----QSAAYQPWIW 230 (479)
Q Consensus 162 ~~f~~~gD~~~~~~-~~~~l~~~~~~---~pD~vl~~GDl~y~~~---~~~~~~~~~~~~~~~~~~----~l~~~~P~~~ 230 (479)
.|+++-||+|..-+ -..++..+.+. +.|++|+.||+---.+ +.+-.+...+.....++. ...+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 47899999986532 23556666665 8999999999853322 111112334444444433 2345678899
Q ss_pred cCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceE-----EEEcCeEEEEEeecC---CCCCCC----------
Q 011680 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWY-----AIRRASAHIIVLSSY---SPYVKY---------- 292 (479)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yy-----sf~~g~v~fi~Lds~---~~~~~~---------- 292 (479)
+=||||.. .|. ..+|..+= ...+.|| .+.+|++++-.|+.- .+|..+
T Consensus 81 IGGNHEAs------------nyL--~eLpyGGw-VApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~s 145 (456)
T KOG2863|consen 81 IGGNHEAS------------NYL--QELPYGGW-VAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNS 145 (456)
T ss_pred ecCchHHH------------HHH--HhcccCce-eccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccch
Confidence 99999952 111 12332210 0124555 367789999988863 233221
Q ss_pred -------HHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCH-----------------HHHHHHHHHHHHcC
Q 011680 293 -------TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGE-----------------SMRAVFESWFVHSR 348 (479)
Q Consensus 293 -------~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~-----------------~~r~~l~~l~~~~~ 348 (479)
-.+.+ ...|++. +.+--|.++|-=+-.... +++.. --...+++||++.+
T Consensus 146 tiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~~--yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~Lk 218 (456)
T KOG2863|consen 146 TIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIYY--YGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLK 218 (456)
T ss_pred hhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchhh--cCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhC
Confidence 11211 1233332 345568888854432221 11111 01247788999999
Q ss_pred CcEEEEccccc
Q 011680 349 VDFIFAGHVHA 359 (479)
Q Consensus 349 VdlvlsGH~H~ 359 (479)
...+|+.|.|+
T Consensus 219 P~yWfsAHLH~ 229 (456)
T KOG2863|consen 219 PQYWFSAHLHV 229 (456)
T ss_pred cchhhhhhHhh
Confidence 99999999996
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00046 Score=65.81 Aligned_cols=68 Identities=16% Similarity=0.283 Sum_probs=41.5
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNS-LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~-~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
+++++||+|..... ...++.+... ..|.++++||+++.+. ... +....+++.+....+++.++||||.
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~------~s~-~v~~~l~~~~~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGK------RSK-DVVNYIFDLMSNDDNVVTLLGNHDD 72 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCC------ChH-HHHHHHHHHhhcCCCeEEEECCcHH
Confidence 68999999964322 1223333332 2599999999998654 111 2222222322234579999999995
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0034 Score=73.51 Aligned_cols=48 Identities=21% Similarity=0.167 Sum_probs=30.9
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
.++.-+|+++|...-....... .+ .....|.++ .+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~~--~e---n~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSSG--AE---DSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCCC--cc---hHHHHHHHhCCCCcEEEeCCCcccc
Confidence 5788999999998754321111 11 122334434 479999999999864
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0074 Score=67.00 Aligned_cols=47 Identities=21% Similarity=0.214 Sum_probs=28.9
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
.++.-+|+++|..+-..... ...+. +-.. +.+ -+||++|.||.|..-
T Consensus 243 ~GaDvIIaLsH~G~~~d~~~---~~~en--a~~~-l~~v~gID~IlgGHsH~~~ 290 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGYN---VGMEN--ASYY-LTEVPGVDAVLMGHSHTEV 290 (780)
T ss_pred cCCCEEEEEeccCccccccc---ccchh--hhHH-HhcCCCCCEEEECCCCCcc
Confidence 56889999999987432111 11111 1111 334 379999999999754
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.081 Score=49.67 Aligned_cols=188 Identities=18% Similarity=0.204 Sum_probs=103.4
Q ss_pred eEEEEEecCCCCCChH---HHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNSL---STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~---~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||.=....-. .-|..+.+. ++||+|..|-++-.+- .--|+.+.++++. .+- ..+.|||=+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~------Git~k~y~~l~~~---G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGF------GITEKIYKELLEA---GAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCc------CCCHHHHHHHHHh---CCC-EEecccccc
Confidence 4899999993332322 233444444 8999999999986554 3344555544432 333 469999987
Q ss_pred ccCCCCCcccccccccccccCCcCCCCC-CCCceEEEEcCeEEEEEeec--CCCCC-CCHHHHHHHHHHHhhcccCCCCe
Q 011680 238 EFMPNMGEVIPFKSYLHRIATPYTASKS-TNPLWYAIRRASAHIIVLSS--YSPYV-KYTPQWWWLREELKKVDREKTPW 313 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~-~~~~yysf~~g~v~fi~Lds--~~~~~-~~~~Q~~WL~~~L~~~~~~~~~w 313 (479)
+... ...|-.-..++--|.+-+.. .+..|+-|+..+..+.+++- ..... ..+.-..=+++.|.+.+ .+++.
T Consensus 71 d~~e----i~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~-~~~~~ 145 (266)
T COG1692 71 DQKE----ILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIK-LGTDL 145 (266)
T ss_pred cchH----HHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCc-cCCce
Confidence 4211 11111111223334433322 23446667776655555543 22211 12333445666666643 45678
Q ss_pred EEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEe
Q 011680 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTV 392 (479)
Q Consensus 314 ~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~ 392 (479)
+||-+|.---+.. .+| -++-+-+|.+|+-=|+|.-..-.++ -++|+.|++-
T Consensus 146 iiVDFHAEtTSEK-----------~a~-g~yldGrvsavvGTHTHV~TaD~rI----------------L~~GTayiTD 196 (266)
T COG1692 146 IIVDFHAETTSEK-----------NAF-GWYLDGRVSAVVGTHTHVPTADERI----------------LPKGTAYITD 196 (266)
T ss_pred EEEEccccchhhh-----------hhh-heEEcCeEEEEEeccCcccccccee----------------cCCCcEEEec
Confidence 9999997532211 111 1344557999999999975433332 1578888873
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00099 Score=63.95 Aligned_cols=74 Identities=14% Similarity=0.233 Sum_probs=46.0
Q ss_pred EEEecCCCCCCh--HHHHHHHHH----h-----CCCEEEEcCcccccCC-CCCCc-------hhhhHHHHHHHHHHHhhc
Q 011680 165 GIIGDLGQTYNS--LSTLKHYMQ----S-----GGQSVLFLGDLSYADR-YEYND-------VGIRWDSWGRFIEQSAAY 225 (479)
Q Consensus 165 ~~~gD~~~~~~~--~~~l~~~~~----~-----~pD~vl~~GDl~y~~~-~~~~~-------~~~~~~~~~~~~~~l~~~ 225 (479)
+++||+|.+... ...++.+.+ . ++|.|+++||+++... +.... ....+..+.++++.+.+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 689999976432 222223322 2 4699999999997632 00000 012244456666677667
Q ss_pred CCeEEcCCCcccc
Q 011680 226 QPWIWSAGNHEIE 238 (479)
Q Consensus 226 ~P~~~v~GNHD~~ 238 (479)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999973
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0011 Score=63.15 Aligned_cols=64 Identities=28% Similarity=0.447 Sum_probs=42.0
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh--------------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCe
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS--------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPW 228 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~--------------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~ 228 (479)
+++++||+|... ..|.++++. +.|.++++||+++.+. + -.+..+.+..+.....+
T Consensus 2 ~i~vigDIHG~~---~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~----~----s~evl~~l~~l~~~~~~ 70 (234)
T cd07423 2 PFDIIGDVHGCY---DELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGP----D----SPEVLRLVMSMVAAGAA 70 (234)
T ss_pred CeEEEEECCCCH---HHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCC----C----HHHHHHHHHHHhhCCcE
Confidence 689999998763 344444332 2589999999998654 1 12233444444333468
Q ss_pred EEcCCCccc
Q 011680 229 IWSAGNHEI 237 (479)
Q Consensus 229 ~~v~GNHD~ 237 (479)
+++.||||.
T Consensus 71 ~~v~GNHE~ 79 (234)
T cd07423 71 LCVPGNHDN 79 (234)
T ss_pred EEEECCcHH
Confidence 899999995
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0014 Score=61.23 Aligned_cols=60 Identities=20% Similarity=0.190 Sum_probs=40.1
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
|++++||+|.. ...+.++.+. ++|.++++||+++.+. + . . +.++.+. ..+++.+.||||.
T Consensus 2 ri~~isDiHg~---~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~----~--~--~---~~~~~l~-~~~~~~v~GNhe~ 66 (207)
T cd07424 2 RDFVVGDIHGH---YSLLQKALDAVGFDPARDRLISVGDLIDRGP----E--S--L---ACLELLL-EPWFHAVRGNHEQ 66 (207)
T ss_pred CEEEEECCCCC---HHHHHHHHHHcCCCCCCCEEEEeCCcccCCC----C--H--H---HHHHHHh-cCCEEEeECCChH
Confidence 68999999954 3344444332 5899999999998654 1 1 1 2233332 2468999999995
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.016 Score=63.51 Aligned_cols=46 Identities=17% Similarity=0.227 Sum_probs=28.2
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccc
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAY 360 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~y 360 (479)
.++.-+|++.|..+-........++ .... +.+ -+||+++.||.|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~~aen-----~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKAMAEN-----SVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCccccccc-----hhHH-HhcCCCCCEEEeCCCCcc
Confidence 5688999999998743211111111 1111 233 47999999999974
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.012 Score=64.30 Aligned_cols=46 Identities=17% Similarity=0.283 Sum_probs=28.5
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccc
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAY 360 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~y 360 (479)
.++.-+|+++|...-....... .+.... .+.+ -+||+++.||.|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~~--~en~~~----~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQPG--AENSAY----YLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCccccc--cchHHH----HHhcCCCCCEEEcCCCCcc
Confidence 4688999999998753211111 111111 1333 47999999999974
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.018 Score=55.43 Aligned_cols=175 Identities=14% Similarity=0.155 Sum_probs=94.7
Q ss_pred EEEEecCCCCCChH--HHHHHHHH---------------hCCCEEEEcCcccccCCCCCC--------------chhhhH
Q 011680 164 FGIIGDLGQTYNSL--STLKHYMQ---------------SGGQSVLFLGDLSYADRYEYN--------------DVGIRW 212 (479)
Q Consensus 164 f~~~gD~~~~~~~~--~~l~~~~~---------------~~pD~vl~~GDl~y~~~~~~~--------------~~~~~~ 212 (479)
+++++|+|.+.... ..++.+.+ .+...+|++||.+...+-... +.....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 68899998876532 12222221 134479999999986431100 112335
Q ss_pred HHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC---CCCCCceEEEEcCeEEEEEeecCCC-
Q 011680 213 DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS---KSTNPLWYAIRRASAHIIVLSSYSP- 288 (479)
Q Consensus 213 ~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~---~~~~~~yysf~~g~v~fi~Lds~~~- 288 (479)
+++..++..+.+.+|+...|||||-.... .+-.++...+ +|.... -..-..-|.|++++++|++.+...-
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~-----lPQqplh~~l-fp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHS-----LPQQPLHRCL-FPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCccccc-----CCCCCCCHHH-hhcccccCCcEEeCCCeEEEECCEEEEEECCCCHH
Confidence 55667777888899999999999963211 0111111100 111100 0001123569999999999887541
Q ss_pred ----CCCCHHHHHHHHHHHhhcccCCCCeEEEEecccc-cccCCCCC--CCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 289 ----YVKYTPQWWWLREELKKVDREKTPWLIVLMHVPL-YSSNVVHY--MEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 289 ----~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~-~~~~~~~~--~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
|...+.-++.|+..|+-- |.-+ +...-+-+ .+.+ +++-+.-.+++|+||.|.|+
T Consensus 156 Di~ky~~~~~~l~~me~~L~wr------------HlaPTaPDTL~~yP~~~~D-------pfvi~~~PhVyf~Gnq~~f~ 216 (257)
T cd07387 156 DILKYSSLESRLDILERTLKWR------------HIAPTAPDTLWCYPFTDRD-------PFILEECPHVYFAGNQPKFG 216 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHhc------------ccCCCCCCccccccCCCCC-------ceeecCCCCEEEeCCCccee
Confidence 344455577788887651 2111 11000000 0000 12223448999999999998
Q ss_pred ee
Q 011680 362 RS 363 (479)
Q Consensus 362 r~ 363 (479)
-.
T Consensus 217 t~ 218 (257)
T cd07387 217 TK 218 (257)
T ss_pred ee
Confidence 64
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.002 Score=62.86 Aligned_cols=62 Identities=23% Similarity=0.354 Sum_probs=41.1
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
+++++||+|... ..+..+.+. +.|.++++||+++.+. + . .+..+.+..+ ..+++++.||||.
T Consensus 2 ~~~vIGDIHG~~---~~l~~ll~~~~~~~~~D~li~lGDlVdrGp----~--s--~~vl~~l~~l--~~~~~~VlGNHD~ 68 (275)
T PRK00166 2 ATYAIGDIQGCY---DELQRLLEKIDFDPAKDTLWLVGDLVNRGP----D--S--LEVLRFVKSL--GDSAVTVLGNHDL 68 (275)
T ss_pred cEEEEEccCCCH---HHHHHHHHhcCCCCCCCEEEEeCCccCCCc----C--H--HHHHHHHHhc--CCCeEEEecChhH
Confidence 578999998653 334433332 6799999999998655 2 1 1233333332 3468899999996
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0025 Score=61.22 Aligned_cols=64 Identities=17% Similarity=0.259 Sum_probs=41.7
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh-------------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeE
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS-------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWI 229 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~-------------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 229 (479)
|+.++||+|.. ...+.++++. .-|.++++||+++.+. + . .+..+.+..+.....++
T Consensus 2 ~~~vIGDIHG~---~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp----~--S--~~vl~~~~~~~~~~~~~ 70 (245)
T PRK13625 2 KYDIIGDIHGC---YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGP----H--S--LRMIEIVWELVEKKAAY 70 (245)
T ss_pred ceEEEEECccC---HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCc----C--h--HHHHHHHHHHhhCCCEE
Confidence 68999999865 3444444443 1368999999998765 2 1 12233333333345789
Q ss_pred EcCCCccc
Q 011680 230 WSAGNHEI 237 (479)
Q Consensus 230 ~v~GNHD~ 237 (479)
++.||||.
T Consensus 71 ~l~GNHE~ 78 (245)
T PRK13625 71 YVPGNHCN 78 (245)
T ss_pred EEeCccHH
Confidence 99999994
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.028 Score=53.77 Aligned_cols=61 Identities=13% Similarity=0.196 Sum_probs=37.9
Q ss_pred HHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceee
Q 011680 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~ 363 (479)
+-+++.+++++. ++..+||++|...-... ... .....+...+...++|+|+.||.|..+-.
T Consensus 162 ~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~----~p~-~~~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAKK-KADIVIVSLHWGVEYSY----YPT-PEQRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHhh-cCCEEEEEecCcccCCC----CCC-HHHHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 445555555432 37899999997542111 112 22334444555679999999999987754
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0039 Score=58.96 Aligned_cols=63 Identities=24% Similarity=0.347 Sum_probs=40.4
Q ss_pred EEEEecCCCCCChHHHHHHHHHh------------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEc
Q 011680 164 FGIIGDLGQTYNSLSTLKHYMQS------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWS 231 (479)
Q Consensus 164 f~~~gD~~~~~~~~~~l~~~~~~------------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v 231 (479)
+.++||+|... ..++++++. ..|.++++||+++.+. + . .+..+.+..+.....++.+
T Consensus 1 ~~vIGDIHG~~---~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp----~--S--~~vl~~l~~l~~~~~~~~l 69 (222)
T cd07413 1 YDFIGDIHGHA---EKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGP----E--I--RELLEIVKSMVDAGHALAV 69 (222)
T ss_pred CEEEEeccCCH---HHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCC----C--H--HHHHHHHHHhhcCCCEEEE
Confidence 36899998763 344444332 2579999999998765 2 1 2233444444333468899
Q ss_pred CCCccc
Q 011680 232 AGNHEI 237 (479)
Q Consensus 232 ~GNHD~ 237 (479)
.||||.
T Consensus 70 ~GNHE~ 75 (222)
T cd07413 70 MGNHEF 75 (222)
T ss_pred EccCcH
Confidence 999995
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0043 Score=58.56 Aligned_cols=60 Identities=18% Similarity=0.181 Sum_probs=39.6
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
+++++||+|... ..+.++++. +.|-++++||+++.+. + . . +.++-+. ...+..+.||||.
T Consensus 18 ri~vigDIHG~~---~~L~~lL~~i~~~~~~D~li~lGDlvDrGp----~--s--~---~vl~~l~-~~~~~~v~GNHE~ 82 (218)
T PRK11439 18 HIWLVGDIHGCF---EQLMRKLRHCRFDPWRDLLISVGDLIDRGP----Q--S--L---RCLQLLE-EHWVRAVRGNHEQ 82 (218)
T ss_pred eEEEEEcccCCH---HHHHHHHHhcCCCcccCEEEEcCcccCCCc----C--H--H---HHHHHHH-cCCceEeeCchHH
Confidence 899999998763 344444332 5789999999998765 2 1 1 2222222 2346789999995
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.028 Score=53.77 Aligned_cols=60 Identities=12% Similarity=0.180 Sum_probs=37.1
Q ss_pred HHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 299 LREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 299 L~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
+++.+++++ .++..+||+.|-..-.... ..... ..+...+.+.++|+|+.||.|..+-..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~----p~~~~-~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYE----PTDEQ-RELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCC----CCHHH-HHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 444454443 3578999999987632111 12222 334444545789999999999887543
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0057 Score=57.68 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=39.6
Q ss_pred eEEEEEecCCCCCChHHHHHHHHH-----hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcc
Q 011680 162 YTFGIIGDLGQTYNSLSTLKHYMQ-----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHE 236 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l~~~~~-----~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 236 (479)
-|++++||+|... ..+.++.+ .+.|.++++||+++.+. + . . +.++.+. ...++.+.||||
T Consensus 15 ~ri~visDiHg~~---~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~----~-~---~---~~l~~l~-~~~~~~v~GNHE 79 (218)
T PRK09968 15 RHIWVVGDIHGEY---QLLQSRLHQLSFCPETDLLISVGDNIDRGP----E-S---L---NVLRLLN-QPWFISVKGNHE 79 (218)
T ss_pred CeEEEEEeccCCH---HHHHHHHHhcCCCCCCCEEEECCCCcCCCc----C-H---H---HHHHHHh-hCCcEEEECchH
Confidence 3899999998653 33333322 26799999999998765 1 1 1 2222222 235789999999
Q ss_pred c
Q 011680 237 I 237 (479)
Q Consensus 237 ~ 237 (479)
.
T Consensus 80 ~ 80 (218)
T PRK09968 80 A 80 (218)
T ss_pred H
Confidence 5
|
|
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.017 Score=44.79 Aligned_cols=70 Identities=20% Similarity=0.378 Sum_probs=45.5
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|+.+++..-. .+++.|.|...... ..-.|+|....+.. ....... +.-...++|++|+|+|.|
T Consensus 2 ~P~~l~v~~~~--~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~------~~~~~~~----~~~~~~~~i~~L~p~t~Y 69 (85)
T PF00041_consen 2 APENLSVSNIS--PTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS------DWQEVTV----PGNETSYTITGLQPGTTY 69 (85)
T ss_dssp SSEEEEEEEEC--SSEEEEEEEESSSTSSSESEEEEEEEETTSSS------EEEEEEE----ETTSSEEEEESCCTTSEE
T ss_pred cCcCeEEEECC--CCEEEEEEECCCCCCCCeeEEEEEEEecccce------eeeeeee----eeeeeeeeeccCCCCCEE
Confidence 57788888654 36999999998421 23467776655432 0111111 112337889999999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
.++|..
T Consensus 70 ~~~v~a 75 (85)
T PF00041_consen 70 EFRVRA 75 (85)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999874
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0075 Score=58.24 Aligned_cols=60 Identities=23% Similarity=0.331 Sum_probs=39.6
Q ss_pred EEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 165 GIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 165 ~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.++||+|... ..++++.+. +.|.++++||+++.+. + . .+..+++..+ ...+..+.||||.
T Consensus 2 yvIGDIHG~~---~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp----~--s--~evl~~l~~l--~~~v~~VlGNHD~ 66 (257)
T cd07422 2 YAIGDIQGCY---DELQRLLEKINFDPAKDRLWLVGDLVNRGP----D--S--LETLRFVKSL--GDSAKTVLGNHDL 66 (257)
T ss_pred EEEECCCCCH---HHHHHHHHhcCCCCCCCEEEEecCcCCCCc----C--H--HHHHHHHHhc--CCCeEEEcCCchH
Confidence 5899998653 344444332 5799999999998765 2 1 1233444433 2468899999996
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0069 Score=59.01 Aligned_cols=67 Identities=18% Similarity=0.276 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCChH-HHHHHHHHh------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC---CeEEcC
Q 011680 163 TFGIIGDLGQTYNSL-STLKHYMQS------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ---PWIWSA 232 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~-~~l~~~~~~------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~---P~~~v~ 232 (479)
++.++||+|...... ..++.+.+. ..+.+|++||+++.+. + . ....+++..+.... .++++.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGP----d-S---~eVld~L~~l~~~~~~~~vv~Lr 74 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGP----E-T---RKVIDFLISLPEKHPKQRHVFLC 74 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCC----C-H---HHHHHHHHHhhhcccccceEEEe
Confidence 689999998764322 233444322 2568999999998765 2 1 22333333333222 478999
Q ss_pred CCccc
Q 011680 233 GNHEI 237 (479)
Q Consensus 233 GNHD~ 237 (479)
||||.
T Consensus 75 GNHE~ 79 (304)
T cd07421 75 GNHDF 79 (304)
T ss_pred cCChH
Confidence 99995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0077 Score=56.63 Aligned_cols=72 Identities=21% Similarity=0.225 Sum_probs=47.0
Q ss_pred eEEEEEecCCCCCChH-----------------HHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh
Q 011680 162 YTFGIIGDLGQTYNSL-----------------STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~-----------------~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~ 223 (479)
-+.++++|+|.+.... ..++++.+. +|+-+|++||+-.+-... . ...|.....+++.+.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~--~-~~e~~~~~~f~~~~~ 96 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKS--L-RQEKEEVREFLELLD 96 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCcc--c-cccHHHHHHHHHHhc
Confidence 4789999999975421 223334444 999999999998765411 1 334444444444443
Q ss_pred hcCCeEEcCCCccc
Q 011680 224 AYQPWIWSAGNHEI 237 (479)
Q Consensus 224 ~~~P~~~v~GNHD~ 237 (479)
..-|+++.||||-
T Consensus 97 -~~evi~i~GNHD~ 109 (235)
T COG1407 97 -EREVIIIRGNHDN 109 (235)
T ss_pred -cCcEEEEeccCCC
Confidence 3359999999994
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.13 Score=48.86 Aligned_cols=189 Identities=19% Similarity=0.203 Sum_probs=86.8
Q ss_pred EEEecCCCCCChHH----HHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccccc
Q 011680 165 GIIGDLGQTYNSLS----TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239 (479)
Q Consensus 165 ~~~gD~~~~~~~~~----~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 239 (479)
+++||. .+..... .|..+.+. ++||||..|.++-.+. .-..+.+.++++ ..+- ..+.|||=++.
T Consensus 1 LfiGDI-vG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~------Git~~~~~~L~~---~GvD-viT~GNH~wdk 69 (253)
T PF13277_consen 1 LFIGDI-VGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGF------GITPKIAEELFK---AGVD-VITMGNHIWDK 69 (253)
T ss_dssp EEE-EB-BCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTS------S--HHHHHHHHH---HT-S-EEE--TTTTSS
T ss_pred CeEEec-CCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCC------CCCHHHHHHHHh---cCCC-EEecCcccccC
Confidence 367887 2211222 33444444 9999999999986543 111222222222 2344 45899998752
Q ss_pred CCCCCcccccccccccccCCcCCCC-CCCCceEEEEcCeEEEEEeec--CCCCCCCHHHHHHHHHHHhhcccCCCCeEEE
Q 011680 240 MPNMGEVIPFKSYLHRIATPYTASK-STNPLWYAIRRASAHIIVLSS--YSPYVKYTPQWWWLREELKKVDREKTPWLIV 316 (479)
Q Consensus 240 ~~~~~~~~~~~~~~~~f~~P~~~~~-~~~~~yysf~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV 316 (479)
.. -..+-.-..+.--|.|-+. ..+..|..++.++..+-++|- .........-+..+++.|++. +.+++.+||
T Consensus 70 ke----i~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiV 144 (253)
T PF13277_consen 70 KE----IFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIV 144 (253)
T ss_dssp TT----HHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEE
T ss_pred cH----HHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEE
Confidence 21 0111111112223444332 335668889988877766664 332222223344555555553 246788999
Q ss_pred EecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEe-CCC
Q 011680 317 LMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTV-GDG 395 (479)
Q Consensus 317 ~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~-G~g 395 (479)
=+|.=.- .. +.-.-++-.-+|.+|+--|+|.----.++ -++|+-||+- |--
T Consensus 145 DFHAEaT-----------SE-K~A~g~~lDGrvsaV~GTHTHVqTaDerI----------------Lp~GTaYiTDvGMt 196 (253)
T PF13277_consen 145 DFHAEAT-----------SE-KQAMGWYLDGRVSAVVGTHTHVQTADERI----------------LPGGTAYITDVGMT 196 (253)
T ss_dssp EEE-S-H-----------HH-HHHHHHHHBTTBSEEEEESSSS-BS--EE-----------------TTS-EEES---EB
T ss_pred EeecCcH-----------HH-HHHHHHHhCCcEEEEEeCCCCccCchhhc----------------cCCCCEEEecCccc
Confidence 9886421 11 12223455678999999999974322221 1578889883 444
Q ss_pred CC
Q 011680 396 GN 397 (479)
Q Consensus 396 G~ 397 (479)
|.
T Consensus 197 G~ 198 (253)
T PF13277_consen 197 GP 198 (253)
T ss_dssp EE
T ss_pred cC
Confidence 44
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.11 Score=50.04 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=44.0
Q ss_pred HHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 295 QWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 295 Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
+.+.+++++++++ .++.++||++|.-.-... ...+..+ .+...+.+.++|+|+.+|.|..+-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~----~p~~~q~-~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN----YPTPEQR-ELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC----CCCHHHH-HHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4578888888865 578899999998532111 1123333 44445556899999999999988654
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.012 Score=55.36 Aligned_cols=62 Identities=24% Similarity=0.282 Sum_probs=39.4
Q ss_pred EEecCCCCCChHHHHHHHHH----hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cCCeEEcCCCcccc
Q 011680 166 IIGDLGQTYNSLSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEIE 238 (479)
Q Consensus 166 ~~gD~~~~~~~~~~l~~~~~----~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 238 (479)
++||+|.. ...+..+.+ ...|.+|++||+++.+. + . .+..+.+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~---~~~l~~~l~~~~~~~~d~li~lGD~vdrg~----~--~--~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGC---LDDLLRLLEKIGFPPNDKLIFLGDYVDRGP----D--S--VEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCC---HHHHHHHHHHhCCCCCCEEEEECCEeCCCC----C--c--HHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 78999854 334444443 27899999999998754 1 1 122233333221 34799999999963
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0086 Score=56.99 Aligned_cols=175 Identities=13% Similarity=0.108 Sum_probs=98.2
Q ss_pred CCEEEEcCcccccCCCCCCchhhhHHHHHHH-------HHHHhhcCCeEEcCCCcccccCCCCCc----ccccccccc--
Q 011680 188 GQSVLFLGDLSYADRYEYNDVGIRWDSWGRF-------IEQSAAYQPWIWSAGNHEIEFMPNMGE----VIPFKSYLH-- 254 (479)
Q Consensus 188 pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~-------~~~l~~~~P~~~v~GNHD~~~~~~~~~----~~~~~~~~~-- 254 (479)
|--++..||++++++....+ .++-.++..+ +.+...++|++.-.||||.+-...... .+..+.|-.
T Consensus 127 plGlV~ggDitddgggq~~q-prEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~ 205 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQ-PREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENY 205 (392)
T ss_pred ceeEEeecceeccCCCcccC-ccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhh
Confidence 44567778999887743322 1111111111 122334689999999999863311000 011112211
Q ss_pred ----cccCCcCCCC--CCCCceEEEEcCeEEEEEeecCCCC-CC-CHHHHHHHHHHHhhcccCCCCeEEEEeccccc--c
Q 011680 255 ----RIATPYTASK--STNPLWYAIRRASAHIIVLSSYSPY-VK-YTPQWWWLREELKKVDREKTPWLIVLMHVPLY--S 324 (479)
Q Consensus 255 ----~f~~P~~~~~--~~~~~yysf~~g~v~fi~Lds~~~~-~~-~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~--~ 324 (479)
.|--|.-.+. .....-||++.|++|.+-+-....- .. ...-+-||+.+|.... +..+.++++.|.-+- +
T Consensus 206 Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~a-adgrpv~LfqhyGwdtfs 284 (392)
T COG5555 206 HRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSA-ADGRPVYLFQHYGWDTFS 284 (392)
T ss_pred cCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeec-cCCCceeehhhhCcccee
Confidence 1111111111 1234478999999998877654321 11 1233679999998643 345568999998773 3
Q ss_pred cCCCCC--------C------CCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 325 SNVVHY--------M------EGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 325 ~~~~~~--------~------~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
+..+.. + .....|..+...++-|+|...|.||.|...-.+
T Consensus 285 teawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~may 338 (392)
T COG5555 285 TEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMAY 338 (392)
T ss_pred ccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccceee
Confidence 222210 0 123457788888999999999999999875443
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.031 Score=57.79 Aligned_cols=44 Identities=18% Similarity=0.270 Sum_probs=34.0
Q ss_pred CCCeEEEEEecCCCCCC---------hHHHHHHHH----HhCCCEEEEcCcccccCC
Q 011680 159 DAPYTFGIIGDLGQTYN---------SLSTLKHYM----QSGGQSVLFLGDLSYADR 202 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~---------~~~~l~~~~----~~~pD~vl~~GDl~y~~~ 202 (479)
...+||++..|.|.++. +..+++.++ +++.||||..||+..++.
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 45799999999998753 445555443 239999999999998766
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.14 Score=44.30 Aligned_cols=85 Identities=18% Similarity=0.275 Sum_probs=55.4
Q ss_pred HHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeC
Q 011680 339 VFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREA 418 (479)
Q Consensus 339 ~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~ 418 (479)
.+.-|-.+..||+.+.||+|.++... -.|-.||-.|++-... +.. .....
T Consensus 98 sL~~LaRqldvDILl~G~Th~f~Aye-------------------~eg~ffvnPGSaTGAf----n~~-------~t~~~ 147 (183)
T KOG3325|consen 98 SLALLARQLDVDILLTGHTHKFEAYE-------------------HEGKFFVNPGSATGAF----NVS-------DTDII 147 (183)
T ss_pred HHHHHHHhcCCcEEEeCCceeEEEEE-------------------eCCcEEeCCCcccCCC----ccc-------ccCCC
Confidence 45555667899999999999988764 3456777777763221 111 11113
Q ss_pred cccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEe
Q 011680 419 SYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHN 455 (479)
Q Consensus 419 ~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 455 (479)
...|..|+|...+..++-| +--||+ |.+|.+...|
T Consensus 148 ~PSFvLmDiqg~~~v~YvY-~lidge-VkVdki~ykK 182 (183)
T KOG3325|consen 148 VPSFVLMDIQGSTVVTYVY-RLIDGE-VKVDKIEYKK 182 (183)
T ss_pred CCceEEEEecCCEEEEEEe-eeeCCc-EEEEEEEecC
Confidence 5678999997766555443 445787 4788887655
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.029 Score=54.55 Aligned_cols=65 Identities=23% Similarity=0.318 Sum_probs=39.4
Q ss_pred EEEEEecCCCCCChH-HHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSL-STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~-~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
+..++||+|...... ..++++.-. ..|-++++||+++.+. + . .+..+++..+ ...+..+.||||.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP----~-s---levL~~l~~l--~~~~~~VlGNHD~ 68 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGP----G-S---LEVLRYVKSL--GDAVRLVLGNHDL 68 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCC----C-H---HHHHHHHHhc--CCCeEEEEChhHH
Confidence 467899998763322 223333212 5689999999998765 2 1 1223333333 1235689999995
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.20 E-value=1.5 Score=42.15 Aligned_cols=67 Identities=21% Similarity=0.168 Sum_probs=41.6
Q ss_pred CCCCeEEEEEecCCCCCChHHHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCC---eEEcCC
Q 011680 158 PDAPYTFGIIGDLGQTYNSLSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP---WIWSAG 233 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~~~~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P---~~~v~G 233 (479)
...-.+|+.++|.|.-... +... .-|+++++||...-+. ...-..|.+ ...+.| =+++.|
T Consensus 58 ~~~~~r~VcisdtH~~~~~------i~~~p~gDvlihagdfT~~g~------~~ev~~fn~----~~gslph~yKIVIaG 121 (305)
T KOG3947|consen 58 GPGYARFVCISDTHELTFD------INDIPDGDVLIHAGDFTNLGL------PEEVIKFNE----WLGSLPHEYKIVIAG 121 (305)
T ss_pred CCCceEEEEecCcccccCc------cccCCCCceEEeccCCccccC------HHHHHhhhH----HhccCcceeeEEEee
Confidence 3456899999999864321 2212 6799999999986433 211122222 223344 378999
Q ss_pred CcccccC
Q 011680 234 NHEIEFM 240 (479)
Q Consensus 234 NHD~~~~ 240 (479)
|||+.++
T Consensus 122 NHELtFd 128 (305)
T KOG3947|consen 122 NHELTFD 128 (305)
T ss_pred ccceeec
Confidence 9998654
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.17 Score=49.42 Aligned_cols=65 Identities=17% Similarity=0.148 Sum_probs=39.9
Q ss_pred EEEEEecCCCCCChHHHHHHHHH----hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh--cCCeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA--YQPWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~----~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD 236 (479)
+++++||+|.. ...+.++.+ ...+-++++||+++.+. . . -+....+..+.- ..-++.+.||||
T Consensus 29 ~i~vvGDiHG~---~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~----~--s--~e~l~~l~~lk~~~p~~v~llrGNHE 97 (271)
T smart00156 29 PVTVCGDIHGQ---FDDLLRLFDLNGPPPDTNYVFLGDYVDRGP----F--S--IEVILLLFALKILYPNRVVLLRGNHE 97 (271)
T ss_pred CEEEEEeCcCC---HHHHHHHHHHcCCCCCceEEEeCCccCCCC----C--h--HHHHHHHHHHHhcCCCCEEEEecccc
Confidence 58999999854 334444433 25678999999998665 1 1 112222222222 234789999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 98 ~~ 99 (271)
T smart00156 98 SR 99 (271)
T ss_pred HH
Confidence 74
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.15 Score=50.61 Aligned_cols=65 Identities=18% Similarity=0.213 Sum_probs=39.7
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD 236 (479)
+++++||+|... ..+.++.+. ..+-+|++||+++.+. . . -+....+..+.-.. -++.+.||||
T Consensus 44 ~i~ViGDIHG~~---~dL~~l~~~~g~~~~~~ylFLGDyVDRG~----~-s---~Evi~lL~~lki~~p~~v~lLRGNHE 112 (305)
T cd07416 44 PVTVCGDIHGQF---YDLLKLFEVGGSPANTRYLFLGDYVDRGY----F-S---IECVLYLWALKILYPKTLFLLRGNHE 112 (305)
T ss_pred CEEEEEeCCCCH---HHHHHHHHhcCCCCCceEEEECCccCCCC----C-h---HHHHHHHHHHHhhcCCCEEEEeCCCc
Confidence 589999998552 233334333 3488999999998755 1 1 11222222332233 4788999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 113 ~~ 114 (305)
T cd07416 113 CR 114 (305)
T ss_pred HH
Confidence 64
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.15 Score=50.75 Aligned_cols=65 Identities=20% Similarity=0.131 Sum_probs=39.5
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh---C--CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS---G--GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNH 235 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~---~--pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNH 235 (479)
++.++||+|.. ...+.++.+. . -+-+|++||+++.+.. . -+ ...++-.+.... -++.+.|||
T Consensus 52 ~~~vvGDiHG~---~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~---s----~E-vl~ll~~lk~~~p~~v~llRGNH 120 (321)
T cd07420 52 QVTICGDLHGK---LDDLFLIFYKNGLPSPENPYVFNGDFVDRGKR---S----IE-ILIILFAFFLVYPNEVHLNRGNH 120 (321)
T ss_pred CeEEEEeCCCC---HHHHHHHHHHcCCCCccceEEEeccccCCCCC---c----HH-HHHHHHHHhhcCCCcEEEecCch
Confidence 68999999865 3344444433 2 2679999999987651 1 11 122222222223 388899999
Q ss_pred ccc
Q 011680 236 EIE 238 (479)
Q Consensus 236 D~~ 238 (479)
|..
T Consensus 121 E~~ 123 (321)
T cd07420 121 EDH 123 (321)
T ss_pred hhh
Confidence 974
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.21 Score=54.42 Aligned_cols=75 Identities=19% Similarity=0.338 Sum_probs=49.8
Q ss_pred CCCCCcEEEEEEcCCCCCccEEEE----EecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC----
Q 011680 70 DYDGKAVIISWVTPNELGSNRVQY----GKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD---- 141 (479)
Q Consensus 70 ~~~~~~~~i~W~t~~~~~~~~V~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~---- 141 (479)
....+++.++|.-++.+.....+| -+... ...+|+. ......+|+|+||+|||.|-+||..
T Consensus 453 ~~~~~sitlsW~~p~~png~ildYEvky~ek~~--------~e~~~~~---~~t~~~~~ti~gL~p~t~YvfqVRarT~a 521 (996)
T KOG0196|consen 453 SRTSDSITLSWSEPDQPNGVILDYEVKYYEKDE--------DERSYST---LKTKTTTATITGLKPGTVYVFQVRARTAA 521 (996)
T ss_pred eeccCceEEecCCCCCCCCcceeEEEEEeeccc--------cccceeE---EecccceEEeeccCCCcEEEEEEEEeccc
Confidence 444579999999988665444444 33321 0111211 1123457899999999999999874
Q ss_pred --CCccceEEEECCCC
Q 011680 142 --GDSSREFWFQTPPK 155 (479)
Q Consensus 142 --g~~~~~~~F~T~p~ 155 (479)
|..++...|.|.|.
T Consensus 522 G~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 522 GYGPYSGKHEFQTLPS 537 (996)
T ss_pred CCCCCCCceeeeecCc
Confidence 56677889999885
|
|
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.44 Score=50.37 Aligned_cols=58 Identities=16% Similarity=0.297 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCcE-EEEcccccce
Q 011680 293 TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDF-IFAGHVHAYE 361 (479)
Q Consensus 293 ~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~Vdl-vlsGH~H~ye 361 (479)
-.|.+|-.+.++. .+.+-+|++.|.|.-... +....+..+...+ ++++ ||-||.|...
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~--------e~~~~~~~ir~~~p~t~IqviGGHshird 270 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDD--------EWKSLHAEIRKVHPNTPIQVIGGHSHIRD 270 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccch--------hhhhHHHHHhhhCCCCceEEECchhhhhh
Confidence 4577888888877 677889999999973211 1111333444444 5778 9999999744
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.26 Score=50.85 Aligned_cols=81 Identities=15% Similarity=0.266 Sum_probs=52.7
Q ss_pred CCCCeEEEEEecCCCCCChH--HHHHHHHHh---------CCCEEEEcCcccccCC-CCCC-------chhhhHHHHHHH
Q 011680 158 PDAPYTFGIIGDLGQTYNSL--STLKHYMQS---------GGQSVLFLGDLSYADR-YEYN-------DVGIRWDSWGRF 218 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~~~--~~l~~~~~~---------~pD~vl~~GDl~y~~~-~~~~-------~~~~~~~~~~~~ 218 (479)
....+++++++|.|.+.... ..+..+.+. +...++.+||.++.-+ |+.+ +...+++++.++
T Consensus 222 ~~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~ 301 (481)
T COG1311 222 GDERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEF 301 (481)
T ss_pred CCcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHH
Confidence 34678999999999864321 112222221 4478999999998544 3322 123355666666
Q ss_pred HHHHhhcCCeEEcCCCcccc
Q 011680 219 IEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 219 ~~~l~~~~P~~~v~GNHD~~ 238 (479)
+..+...+-++..|||||..
T Consensus 302 L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 302 LDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HhhCCCCceEEEecCCCCcc
Confidence 66666677799999999963
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.22 Score=48.87 Aligned_cols=65 Identities=18% Similarity=0.144 Sum_probs=38.9
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh--cCCeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA--YQPWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD 236 (479)
.+.++||+|.. ...+.++.+. ..+-+|++||+++.+. . .. +....+..+.- ...++.+.||||
T Consensus 43 ~i~vvGDIHG~---~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~----~--s~--evl~ll~~lk~~~p~~v~llrGNHE 111 (285)
T cd07415 43 PVTVCGDIHGQ---FYDLLELFRVGGDPPDTNYLFLGDYVDRGY----Y--SV--ETFLLLLALKVRYPDRITLLRGNHE 111 (285)
T ss_pred CEEEEEeCCCC---HHHHHHHHHHcCCCCCCeEEEEeEECCCCc----C--HH--HHHHHHHHHhhcCCCcEEEEecccc
Confidence 48899999854 2333333332 4467999999998755 1 11 12222222222 235899999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 112 ~~ 113 (285)
T cd07415 112 SR 113 (285)
T ss_pred hH
Confidence 63
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.79 E-value=0.27 Score=49.92 Aligned_cols=65 Identities=15% Similarity=0.081 Sum_probs=39.2
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CC-CEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNH 235 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~p-D~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNH 235 (479)
++.++||+|.. ...+..+.+. .. +.+|++||+++.+. + . -+....+..+.-.. -++.+.|||
T Consensus 67 ~i~VvGDIHG~---~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp----~--S--lEvl~lL~~lki~~p~~v~lLRGNH 135 (377)
T cd07418 67 EVVVVGDVHGQ---LHDVLFLLEDAGFPDQNRFYVFNGDYVDRGA----W--G--LETFLLLLSWKVLLPDRVYLLRGNH 135 (377)
T ss_pred CEEEEEecCCC---HHHHHHHHHHhCCCCCCceEEEeccccCCCC----C--h--HHHHHHHHHHhhccCCeEEEEeeec
Confidence 58999999865 3344444443 22 35999999998655 1 1 11222222222223 378999999
Q ss_pred ccc
Q 011680 236 EIE 238 (479)
Q Consensus 236 D~~ 238 (479)
|..
T Consensus 136 E~~ 138 (377)
T cd07418 136 ESK 138 (377)
T ss_pred ccc
Confidence 974
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.36 Score=47.58 Aligned_cols=65 Identities=20% Similarity=0.248 Sum_probs=38.3
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD 236 (479)
.++++||+|.. ...+.++.+. ..+-+|++||+++.+.. .. + ....+..+.-.. -++.+.||||
T Consensus 51 ~i~viGDIHG~---~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~-----s~--e-~i~ll~~lk~~~p~~i~llrGNHE 119 (293)
T cd07414 51 PLKICGDIHGQ---YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ-----SL--E-TICLLLAYKIKYPENFFLLRGNHE 119 (293)
T ss_pred ceEEEEecCCC---HHHHHHHHHhcCCCCcceEEEEeeEecCCCC-----cH--H-HHHHHHHhhhhCCCcEEEEecccc
Confidence 48899999854 2333333332 45678999999987651 11 1 112222222222 3788999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 120 ~~ 121 (293)
T cd07414 120 CA 121 (293)
T ss_pred hh
Confidence 74
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.36 Score=48.15 Aligned_cols=65 Identities=18% Similarity=0.172 Sum_probs=38.3
Q ss_pred eEEEEEecCCCCCChHHHHHHHHHh-C----CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh--cCCeEEcCCC
Q 011680 162 YTFGIIGDLGQTYNSLSTLKHYMQS-G----GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA--YQPWIWSAGN 234 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l~~~~~~-~----pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GN 234 (479)
-++.++||+|.. ...+.++.+. + -|-+|++||+++.+.. . -+....+-.+.- ..-++.+.||
T Consensus 60 ~~~~VvGDIHG~---~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~------S--~Evl~ll~~lki~~p~~v~lLRGN 128 (316)
T cd07417 60 EKITVCGDTHGQ---FYDLLNIFELNGLPSETNPYLFNGDFVDRGSF------S--VEVILTLFAFKLLYPNHFHLNRGN 128 (316)
T ss_pred ceeEEeecccCC---HHHHHHHHHhcCCCCccCeEEEEeeEecCCCC------h--HHHHHHHHHhhhccCCceEEEeec
Confidence 368999999854 3344444433 2 2579999999987651 1 111222222211 2236889999
Q ss_pred ccc
Q 011680 235 HEI 237 (479)
Q Consensus 235 HD~ 237 (479)
||.
T Consensus 129 HE~ 131 (316)
T cd07417 129 HET 131 (316)
T ss_pred cch
Confidence 996
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.3 Score=48.13 Aligned_cols=23 Identities=13% Similarity=0.275 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEccccc
Q 011680 337 RAVFESWFVHSRVDFIFAGHVHA 359 (479)
Q Consensus 337 r~~l~~l~~~~~VdlvlsGH~H~ 359 (479)
.+++...+++.+.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 46788889999999999999854
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.92 E-value=0.38 Score=47.95 Aligned_cols=65 Identities=20% Similarity=0.193 Sum_probs=38.4
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD 236 (479)
.++++||+|.. ...+.++.+. ..+-+|++||+++.+. . . -+....+..+.-.. -++.+.||||
T Consensus 60 ~i~vvGDIHG~---~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~----~--s--~evl~ll~~lki~~p~~v~llRGNHE 128 (320)
T PTZ00480 60 PLKICGDVHGQ---YFDLLRLFEYGGYPPESNYLFLGDYVDRGK----Q--S--LETICLLLAYKIKYPENFFLLRGNHE 128 (320)
T ss_pred CeEEEeecccC---HHHHHHHHHhcCCCCcceEEEeceecCCCC----C--c--HHHHHHHHHhcccCCCceEEEecccc
Confidence 48899999854 2333333332 4467889999998755 1 1 11122222222222 4789999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 129 ~~ 130 (320)
T PTZ00480 129 CA 130 (320)
T ss_pred hh
Confidence 74
|
|
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=91.90 E-value=0.5 Score=46.78 Aligned_cols=65 Identities=17% Similarity=0.256 Sum_probs=38.8
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCC--eEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP--WIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P--~~~v~GNHD 236 (479)
.+.++||+|.. ...+.++.+. ..+-+|++||+++.+. . .. +....+-.+.-..| ++.+.||||
T Consensus 44 ~i~vvGDIHG~---~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~----~--s~--evl~ll~~lk~~~p~~v~llrGNHE 112 (303)
T PTZ00239 44 PVNVCGDIHGQ---FYDLQALFKEGGDIPNANYIFIGDFVDRGY----N--SV--ETMEYLLCLKVKYPGNITLLRGNHE 112 (303)
T ss_pred CEEEEEeCCCC---HHHHHHHHHhcCCCCCceEEEeeeEcCCCC----C--HH--HHHHHHHHhhhcCCCcEEEEecccc
Confidence 38889999854 3333334332 4567999999998765 1 11 11222222222334 789999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 113 ~~ 114 (303)
T PTZ00239 113 SR 114 (303)
T ss_pred hH
Confidence 63
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.27 E-value=0.61 Score=46.43 Aligned_cols=22 Identities=9% Similarity=0.211 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 011680 337 RAVFESWFVHSRVDFIFAGHVH 358 (479)
Q Consensus 337 r~~l~~l~~~~~VdlvlsGH~H 358 (479)
.+++...+++.+.++++=||.=
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe~ 263 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHEC 263 (311)
T ss_pred HHHHHHHHHHCCCeEEEEechh
Confidence 4678889999999999999983
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=91.19 E-value=1.6 Score=31.96 Aligned_cols=69 Identities=17% Similarity=0.273 Sum_probs=38.8
Q ss_pred eEEEeecCCCCCcEEEEEEcCCCCC--ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeC
Q 011680 63 QVRITQGDYDGKAVIISWVTPNELG--SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG 140 (479)
Q Consensus 63 ~v~lt~~~~~~~~~~i~W~t~~~~~--~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~ 140 (479)
.+++..... +++.|+|....... ...++|........ ....... .....++..+.+|+|+++|.++|.
T Consensus 6 ~~~~~~~~~--~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~i~~L~~~~~Y~v~v~ 75 (83)
T smart00060 6 NLRVTDVTS--TSVTLSWEPPPDDGITGYIVGYRVEYREEG----SSWKEVN----VTPSSTSYTLTGLKPGTEYEFRVR 75 (83)
T ss_pred cEEEEEEeC--CEEEEEECCCCCCCCCccEEEEEEEEecCC----CccEEEE----ecCCccEEEEeCcCCCCEEEEEEE
Confidence 355554443 38999998553221 23566655432211 0001110 011157789999999999999985
Q ss_pred C
Q 011680 141 D 141 (479)
Q Consensus 141 ~ 141 (479)
.
T Consensus 76 a 76 (83)
T smart00060 76 A 76 (83)
T ss_pred E
Confidence 3
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=90.63 E-value=1.9 Score=32.62 Aligned_cols=69 Identities=19% Similarity=0.327 Sum_probs=38.3
Q ss_pred CceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 61 PQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 61 P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
|..+.+.... ..++.|.|...... ..-.|+|........ ..+. ....-..++.+.+|.|+++|.
T Consensus 4 p~~~~~~~~~--~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~-------~~~~---~~~~~~~~~~i~~l~p~~~Y~ 71 (93)
T cd00063 4 PTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDW-------KEVE---VTPGSETSYTLTGLKPGTEYE 71 (93)
T ss_pred CCCcEEEEec--CCEEEEEECCCCCCCCcceeEEEEEeeCCCCCC-------EEee---ccCCcccEEEEccccCCCEEE
Confidence 4445444333 36899999887532 123444444321111 1111 011245678899999999999
Q ss_pred EEeCC
Q 011680 137 YKIGD 141 (479)
Q Consensus 137 Y~v~~ 141 (479)
++|..
T Consensus 72 ~~v~a 76 (93)
T cd00063 72 FRVRA 76 (93)
T ss_pred EEEEE
Confidence 99853
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=85.76 E-value=1.3 Score=50.50 Aligned_cols=80 Identities=28% Similarity=0.499 Sum_probs=47.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCCcc------EEEEEecCCCC---cceEEeeEEEEeeeccccceEEEEEecCCC
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELGSN------RVQYGKLEKKY---DSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~------~V~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~ 130 (479)
+|+.|.+... .+++++|+|..+.+.... .++|++..... +..+.|+.+ .-.+++|+
T Consensus 618 PP~Nl~lev~--sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n~~-------------~~l~~~Le 682 (1381)
T KOG4221|consen 618 PPQNLSLEVV--SSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGNTT-------------QYLFNGLE 682 (1381)
T ss_pred CCcceEEEec--CCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccchh-------------hhHhhcCC
Confidence 4555766654 457999999998643221 34454333221 122222221 22567899
Q ss_pred CCcEEEEEeCC------CCccceEEEECCC
Q 011680 131 YDTKYYYKIGD------GDSSREFWFQTPP 154 (479)
Q Consensus 131 p~t~Y~Y~v~~------g~~~~~~~F~T~p 154 (479)
|+|.|.+||.. |..+...++.|+-
T Consensus 683 p~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 683 PNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred CCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 99999999864 3445677777763
|
|
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=82.81 E-value=1.7 Score=40.37 Aligned_cols=75 Identities=11% Similarity=0.184 Sum_probs=39.0
Q ss_pred EEEEecCCCCCCh--HHHHHHHHH-----hCCCEEEEcCcccccCCCCCC--ch--hhhH-HHH----HHHHHHHhhcCC
Q 011680 164 FGIIGDLGQTYNS--LSTLKHYMQ-----SGGQSVLFLGDLSYADRYEYN--DV--GIRW-DSW----GRFIEQSAAYQP 227 (479)
Q Consensus 164 f~~~gD~~~~~~~--~~~l~~~~~-----~~pD~vl~~GDl~y~~~~~~~--~~--~~~~-~~~----~~~~~~l~~~~P 227 (479)
|++++|.+.+.+. .+.+..+.+ .+|+.+|++|++++....... .. .... ..+ ...+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788999887442 334444443 369999999999986441100 00 0011 111 122223345778
Q ss_pred eEEcCCCcccc
Q 011680 228 WIWSAGNHEIE 238 (479)
Q Consensus 228 ~~~v~GNHD~~ 238 (479)
++.+||+||..
T Consensus 81 vvlvPg~~D~~ 91 (209)
T PF04042_consen 81 VVLVPGPNDPT 91 (209)
T ss_dssp EEEE--TTCTT
T ss_pred EEEeCCCcccc
Confidence 99999999974
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 479 | ||||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 1e-149 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-143 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-142 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-142 |
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 479 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-147 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-147 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 3e-28 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 2e-22 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 2e-08 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 9e-08 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 1e-07 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 9e-07 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 4e-05 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 2e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 4e-04 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 5e-04 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 7e-04 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 426 bits (1097), Expect = e-147
Identities = 242/417 (58%), Positives = 309/417 (74%), Gaps = 3/417 (0%)
Query: 44 DIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSS 103
D+PL + VF +P G+NAPQQV ITQGD G+A+IISWVT +E GS+ V+Y +
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRI 61
Query: 104 AEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYT 163
A+G ++ Y F+ Y SG+IHH + L+Y+TKYYY++G +++R F F TPP+ D PYT
Sbjct: 62 AKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYT 121
Query: 164 FGIIGDLGQTYNSLSTLKHYMQSGG--QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ 221
FG+IGDLGQ+++S +TL HY S Q+VLF+GDLSYADRY +D +RWD+WGRF E+
Sbjct: 122 FGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRWDTWGRFTER 180
Query: 222 SAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHII 281
S AYQPWIW+AGNHEIEF P + E PFK + +R PY AS+ST+P WY+I+RASAHII
Sbjct: 181 SVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHII 240
Query: 282 VLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFE 341
VLSSYS Y + TPQ+ WL++EL+KV R +TPWLIVLMH PLY+S H+MEGE+MR FE
Sbjct: 241 VLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFE 300
Query: 342 SWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGL 401
+WFV +VD +FAGHVHAYERS R+SNI Y T+G PV D+SAPVY+T+GD GN +
Sbjct: 301 AWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVI 360
Query: 402 AGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQYW 458
+ PQP YSAFREAS+GH +IKNRTHA + WNRN DG V DSV F N++W
Sbjct: 361 DSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHW 417
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 425 bits (1093), Expect = e-147
Identities = 245/422 (58%), Positives = 315/422 (74%), Gaps = 4/422 (0%)
Query: 40 WPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTP-NELGSNRVQYGKLEK 98
D+P + VF +P G+NAPQQV ITQGDY+G+ VIISW TP ++ G+N+V Y
Sbjct: 4 AEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENS 63
Query: 99 KYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHP 158
K A GTV Y +Y Y S +IHHC + DLEYDTKYYY++G GD+ R+FWF TPPK P
Sbjct: 64 KSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGP 123
Query: 159 DAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQS--VLFLGDLSYADRYEYNDVGIRWDSWG 216
D PY FG+IGD+GQT++S +TL HY Q+ + VLF+GDLSY++R+ +D RWD+WG
Sbjct: 124 DVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHD-NNRWDTWG 182
Query: 217 RFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRA 276
RF E+S AYQPWIW+AGNHEI++ P++GE PF + +R TP+ AS S +PLWYAI+RA
Sbjct: 183 RFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRA 242
Query: 277 SAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESM 336
SAHIIVLSSYS +VKY+PQ+ W EL+KV+R +TPWLIVL+H PLY+S HYMEGE+M
Sbjct: 243 SAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAM 302
Query: 337 RAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGG 396
RA+FE +FV+ +VD +F+GHVH+YERS R+SN+ YN + PV D+SAPVY+T+GDGG
Sbjct: 303 RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGG 362
Query: 397 NQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQ 456
N EGLA PQP+YSAFREAS+GH +IKNRTHA + W+RN DG V DS+ N+
Sbjct: 363 NSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNR 422
Query: 457 YW 458
YW
Sbjct: 423 YW 424
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 113 bits (283), Expect = 3e-28
Identities = 40/245 (16%), Positives = 68/245 (27%), Gaps = 33/245 (13%)
Query: 158 PDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQS-----------VLFLGDLSYADRYEYN 206
P F +GD G N+ M + +L LGD Y
Sbjct: 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 62
Query: 207 DVGIRWDSW--GRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA-- 262
R+ F + S PW AGNH+ + S +PY
Sbjct: 63 K-DKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLR 121
Query: 263 --SKSTNPLWYAIRRASAHIIVLSSYSPYV---------KYTPQWWWLREELKKVDREKT 311
+N + + S Q W++++L K
Sbjct: 122 FKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KE 178
Query: 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHY 371
+++V H P++S + + +V GH H + + + +
Sbjct: 179 DYVLVAGHYPVWSIA--EHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGF 236
Query: 372 NFTSG 376
SG
Sbjct: 237 -VLSG 240
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 97.3 bits (241), Expect = 2e-22
Identities = 43/325 (13%), Positives = 87/325 (26%), Gaps = 69/325 (21%)
Query: 160 APYTFGIIGDLG-----QTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDS 214
F +GD G Q N+ + ++ G ND W +
Sbjct: 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDP--AWKN 59
Query: 215 WGRFIEQ---SAAYQPWIWSAGNHEIEFMPN---MGEVIPFKSYLHRIATPYTASKSTNP 268
+ Y P+ G + N + + + A + P
Sbjct: 60 LYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYP 119
Query: 269 LW-----------------------YAIRRASAHIIVLSSYSPYVKYTP------QWWWL 299
W + +A I + ++ + W L
Sbjct: 120 KWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDL 179
Query: 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359
+ +L + ++IV+ P+YSS + + + VD +GH +
Sbjct: 180 KSQLSVAK-KIADFIIVVGDQPIYSSG--YSRGSSYLAYYLLPLLKDAEVDLYISGHDNN 236
Query: 360 YERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREAS 419
E + + ++T G G +G +G + + S F +
Sbjct: 237 MEVI-------------------EDNDMAHITCGSGSMSQGKSG----MKNSKSLFFSSD 273
Query: 420 YGHSTLEIKNRTHAFYHWNRNDDGN 444
G E+ + + + G
Sbjct: 274 IGFCVHEL-SNNGIVTKFVSSKKGE 297
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 2e-08
Identities = 29/211 (13%), Positives = 59/211 (27%), Gaps = 34/211 (16%)
Query: 191 VLFLGDLSY-ADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI------------ 237
++ GDL+ ++ + ++ + + GNH+I
Sbjct: 96 LIISGDLTNNGEKTSHEELAKKLTQVEK------NGTQVFVVPGNHDINNPWARKFEKDK 149
Query: 238 EFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRAS-AHIIVLSS--YSPYVKYTP 294
+ + F S L Y +S +++L + Y ++
Sbjct: 150 QLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGN 209
Query: 295 QWW----------WLREELKKVDREKTPWLIVLMHVPLYSSN-VVHYMEGESMRAVFESW 343
W++E + LI ++H L N V+ +
Sbjct: 210 PTTEGGLTAGTLDWIKESSALAKKNGAK-LIPVLHHNLTDHNDVIQKGYTINYNQQVIDA 268
Query: 344 FVHSRVDFIFAGHVHAYERSYRISNIHYNFT 374
+DF +GH+H S T
Sbjct: 269 LTEGAMDFSLSGHIHTQNIRSAKSTDGKEIT 299
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 52.7 bits (125), Expect = 9e-08
Identities = 23/146 (15%), Positives = 40/146 (27%), Gaps = 3/146 (2%)
Query: 228 WIWSAGNHEIEFMPNMGEVI--PFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSS 285
+ + + VI +S H + + N + S +
Sbjct: 136 FSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFV 195
Query: 286 YSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFV 345
Q WL L D ++ ++ H+P++ + AV
Sbjct: 196 KFNGGFSEQQLQWLDAVLTLSDHKQERV-LIFSHLPVHPCAADPICLAWNHEAVLSVLRS 254
Query: 346 HSRVDFIFAGHVHAYERSYRISNIHY 371
H V AGH H R S +
Sbjct: 255 HQSVLCFIAGHDHDGGRCTDSSGAQH 280
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 41/225 (18%), Positives = 67/225 (29%), Gaps = 43/225 (19%)
Query: 191 VLFLGDLS-YADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF 249
++F GDL+ + Y + + + + +W GNH+ + + +
Sbjct: 70 IVFTGDLADKGEPAAYRKLRGLVEPFAAQLGA-----ELVWVMGNHD--DRAELRKFLLD 122
Query: 250 KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKY----TPQWWWLREELKK 305
+ S PL IIVL + P + Q WL EEL
Sbjct: 123 ------------EAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELAT 170
Query: 306 VDREKTPWLIVLMHVPLYSSNVVHYMEGESMR--AVFESWFVHSRVDFIFAGHVHAYERS 363
+ T I+ +H P S + +R A + V I AGH+H Y +
Sbjct: 171 PAPDGT---ILALHHPPIPSVL-DMAVTVELRDQAALGRVLRGTDVRAILAGHLH-YSTN 225
Query: 364 YRISNIHY----------NFTSGDRYPVPDKSAPVY--LTVGDGG 396
I + T A + V
Sbjct: 226 ATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDT 270
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 9e-07
Identities = 25/190 (13%), Positives = 49/190 (25%), Gaps = 34/190 (17%)
Query: 191 VLFLGDLS-YADRYEYNDVGIRWDSWGRFIEQSAAYQ-PWIWSAGNHEIEFMPNMGEVIP 248
V+ GD+ EY + + P GNH+ E
Sbjct: 45 VVVSGDIVNCGRPEEYQ----------VARQILGSLNYPLYLIPGNHD--DKALFLEY-- 90
Query: 249 FKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKY----TPQWWWLREELK 304
+ ++ + N + A+ + ++ + S WL +L
Sbjct: 91 LQPLCPQLGSDA------NNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLF 144
Query: 305 KVDREKTPWLIVLMHVPLYSSNVVHYMEGESMR---AVFESWFVHSRVDFIFAGHVHAYE 361
+ + + MH P M+ + + + IF GH H
Sbjct: 145 EGGDKPA---TIFMHHPPLPLGNAQ-MDPIACENGHRLLALVERFPSLTRIFCGHNH-SL 199
Query: 362 RSYRISNIHY 371
+
Sbjct: 200 TMTQYRQALI 209
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-05
Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 25/111 (22%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYK 115
+ ++T ++W P G++ R+++G +E G +Y
Sbjct: 10 QCKPPQVT--CRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGPGLSYE--- 64
Query: 116 YKSGYIHHCLVDDLEYDTKYYYKI------GDGDSSREFWFQTPPKIHPDA 160
+ L T YY ++ G G S TPP P +
Sbjct: 65 ----------IKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSSGPSS 105
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 2e-04
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 18/111 (16%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYK 115
AP+ + + + +AVI+SW P E + Y + T
Sbjct: 11 APKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFY----TLDKNIPIDDWIMETI-- 64
Query: 116 YKSGYIHHCLVDDLEYDTKYYYKI------GDGDSSREFWFQTPPKIHPDA 160
SG + DL DT YY++I G G S F+T P +
Sbjct: 65 --SGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGPSS 113
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 4e-04
Identities = 65/457 (14%), Positives = 129/457 (28%), Gaps = 137/457 (29%)
Query: 44 DIPLHN-----KVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEK 98
DI FD + P+ + +++ + D +I+S + + + L
Sbjct: 20 DILSVFEDAFVDNFDCKDVQDMPKSI-LSKEEID--HIIMS---KDAVSGTLRLFWTLLS 73
Query: 99 KYDSSAEGTV-----TNYTFY--KYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQ 151
K + + V NY F K+ T+ Y R+ +
Sbjct: 74 KQEEMVQKFVEEVLRINYKFLMSPIKTEQR------QPSMMTRMY------IEQRDRLYN 121
Query: 152 TPPKIHPDAPYTFGIIGDLGQTYNSLSTLK-------HYMQSGGQSVLFLGDLSYADRYE 204
A Y + + +L L+ + G++ + L
Sbjct: 122 DNQVF---AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQC 178
Query: 205 YNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASK 264
D I W + +E + + L++I +T+
Sbjct: 179 KMDFKIFWLNLKNCNSPET------------VLEMLQKL---------LYQIDPNWTS-- 215
Query: 265 STNPLWYAIRRASAHIIVLSSYSPYVKYTPQWW--WLREELKKVDREKTPWLIVLMHVPL 322
S +S +K LR LK E L+VL++V
Sbjct: 216 ------------------RSDHSSNIKLRIHSIQAELRRLLKSKPYENC--LLVLLNV-- 253
Query: 323 YSSNVVHYMEGESMRAVFESWFVHSR----VDFIFAGHVHAYERSYRISNIHYNFTSGDR 378
++ + + + + +R DF+ A + + T
Sbjct: 254 QNAKAWNAFNLSC-KIL-----LTTRFKQVTDFLSAATT----THISLDHHSMTLT---- 299
Query: 379 YPVPDKSAPVYLTVGDGGNQEGLAGRFLD--PQ--PNYSAFREASYGHSTL------EIK 428
PD+ + L ++LD PQ P RE + I+
Sbjct: 300 ---PDEV-------------KSLLLKYLDCRPQDLP-----REVLTTNPRRLSIIAESIR 338
Query: 429 NRTHAFYHWNRNDDGNKVTTDSVVFHNQYWSNNLRRR 465
+ + +W ++ + +K+TT N R+
Sbjct: 339 DGLATWDNW-KHVNCDKLTTIIESSLNVLEPAEYRKM 374
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109 | Back alignment and structure |
|---|
Score = 38.9 bits (91), Expect = 4e-04
Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 18/110 (16%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119
P +T + + W P+ S+ LE + ++S G Y G
Sbjct: 10 MPASPVLT--KAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD------G 61
Query: 120 YIHHCLVDDLEYDTKYYY------KIGDGDSSREFWFQTPPKIHPDAPYT 163
V +L TKY + G + S PD+ +
Sbjct: 62 EDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEV----VEFTTCPDSGPS 107
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 5e-04
Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 11/108 (10%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119
+P ++ + + P G + K E + Y ++
Sbjct: 10 SPSIDQVEPYS---STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD--AKEAS 64
Query: 120 YIHHCLVDDLEYDTKYYY------KIGDGDSSREFWFQTPPKIHPDAP 161
+ L+ +T Y G G+ S F+T P P AP
Sbjct: 65 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAP 112
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 7e-04
Identities = 22/120 (18%), Positives = 33/120 (27%), Gaps = 16/120 (13%)
Query: 41 PSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKY 100
S+ + D P P + + G + I+W P + G + +E
Sbjct: 4 GSSGVVEFTTCPDKP---GIPVKPSVK-GKIHSHSFKITWDPPKDNGGATINKYVVEMAE 59
Query: 101 DSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY------KIGDGDSSREFWFQTPP 154
S+ + SG L D L Y G S QTP
Sbjct: 60 GSNGN------KWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPA 113
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 479 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.97 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.9 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.89 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.89 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.81 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.57 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.49 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.47 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.31 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.31 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.31 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.3 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.25 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.23 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.2 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.14 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.05 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.05 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.0 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.99 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.98 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.97 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.96 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.92 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.75 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.73 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.63 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.6 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.58 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.52 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.44 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.43 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.16 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.14 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.11 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 98.04 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.03 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.84 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.81 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.46 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 97.3 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.24 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.23 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 97.1 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 96.97 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 96.94 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 96.93 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.92 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.92 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.91 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.91 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 96.84 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.8 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.76 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.75 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 96.73 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 96.72 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.69 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.68 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 96.66 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 96.66 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.62 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 96.59 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.56 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 96.53 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 96.51 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.4 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 96.4 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 96.37 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.36 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.36 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.32 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 96.31 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.29 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 96.27 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.26 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.24 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 96.12 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 96.09 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.09 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 96.08 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 96.06 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 96.06 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 96.03 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 96.02 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 96.0 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 95.98 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 95.91 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.89 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.89 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 95.88 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 95.87 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.87 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.85 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 95.84 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 95.82 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 95.82 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 95.76 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 95.71 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 95.71 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.62 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.59 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 95.58 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 95.57 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 95.52 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 95.48 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 95.45 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 95.44 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 95.41 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 95.41 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 95.4 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 95.36 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 95.36 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 95.33 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 95.3 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 95.24 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 95.23 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 95.2 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 95.15 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 95.11 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 95.11 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.08 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 95.06 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 95.0 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.98 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 94.97 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 94.9 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 94.88 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 94.81 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 94.8 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 94.74 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 94.68 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 94.64 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.6 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 94.5 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 94.49 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 94.47 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 94.44 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 94.42 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 94.41 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 94.34 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 94.21 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 94.18 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 94.09 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 93.88 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 93.87 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 93.8 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 93.78 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 93.73 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 93.61 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 93.57 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 93.56 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 93.55 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 93.48 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 93.4 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 93.36 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 93.31 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 93.06 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 93.02 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 93.02 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 92.89 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 92.75 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 92.44 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 92.41 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 92.22 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 91.93 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 91.74 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 90.63 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 90.57 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 90.41 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 90.34 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 90.25 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 89.9 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 89.41 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 88.69 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 88.13 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 87.37 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 86.64 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 86.58 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 86.55 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 85.98 | |
| 2uvf_A | 608 | Exopolygalacturonase; GH28, pectin, cell WALL, hyd | 85.88 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 85.76 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 85.74 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 84.98 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 84.27 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 83.99 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 83.35 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 83.22 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 82.22 | |
| 4doh_R | 221 | Interleukin-20 receptor subunit alpha; IL10 family | 81.57 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 81.52 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 81.31 | |
| 3b4n_A | 344 | Endo-pectate lyase; pectin, galacturonic acid, rig | 80.79 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 80.65 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-79 Score=632.43 Aligned_cols=419 Identities=59% Similarity=1.112 Sum_probs=371.6
Q ss_pred CCcCccCcCccccCCCCCCCCceEEEeecCCCCCcEEEEEEcC-CCCCccEEEEEecCCCCcceEEeeEEEEeeeccccc
Q 011680 41 PSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTP-NELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119 (479)
Q Consensus 41 ~~~~~p~~~~~~~~p~~~~~P~~v~lt~~~~~~~~~~i~W~t~-~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (479)
.+++||++++++++|++..+|+||||+++++++++|+|+|+|. +.++.++|+|++.++.+...+.|+.++|++.++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
T 1xzw_A 5 EDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSA 84 (426)
T ss_dssp HHHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECC
T ss_pred ccccCCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCC
Confidence 3679999999999999999999999999999889999999999 777889999999988888888888888877667789
Q ss_pred eEEEEEecCCCCCcEEEEEeCCCCccceEEEECCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHHh--CCCEEEEcCcc
Q 011680 120 YIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDL 197 (479)
Q Consensus 120 ~~h~v~l~gL~p~t~Y~Y~v~~g~~~~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~--~pD~vl~~GDl 197 (479)
++|+|+|+||+|||+|+|||++|..+++++|+|+|.+++..++||+++||+|.+.....+++++.+. +|||||++||+
T Consensus 85 ~~~~v~l~gL~p~t~Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~ 164 (426)
T 1xzw_A 85 FIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDL 164 (426)
T ss_dssp EEEEEEECCCCTTCEEEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCC
T ss_pred EEEEEEECCCCCCCEEEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCCh
Confidence 9999999999999999999998766789999999988778899999999998875556788888876 89999999999
Q ss_pred cccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCe
Q 011680 198 SYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRAS 277 (479)
Q Consensus 198 ~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~ 277 (479)
+|.++....+ ..+|+.|.+.++++.+.+|+++++||||+...+..++...+..|..+|.||.++++...+.||+|++|+
T Consensus 165 ~y~~~~~~~~-~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~ 243 (426)
T 1xzw_A 165 SYSNRWPNHD-NNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRAS 243 (426)
T ss_dssp CCGGGSGGGC-THHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETT
T ss_pred hhcccCCccc-chHHHHHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECC
Confidence 9987643333 578999999999998899999999999986543222234677888899999876656678899999999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccc
Q 011680 278 AHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHV 357 (479)
Q Consensus 278 v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~ 357 (479)
++||+||++..+..+.+|++||+++|+++++++++|+||++|+|+++....+..+...+++.|+++|.+++||++|+||+
T Consensus 244 ~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~ 323 (426)
T 1xzw_A 244 AHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHV 323 (426)
T ss_dssp EEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSS
T ss_pred EEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcCh
Confidence 99999999988888899999999999998767789999999999998776555667788999999999999999999999
Q ss_pred ccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEE
Q 011680 358 HAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHW 437 (479)
Q Consensus 358 H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~ 437 (479)
|.|+|+.|++++++++.+|.|.++.+++|++||++|+||+.++....+.+++|+|++|+..+|||++|+|.|++++.|+|
T Consensus 324 H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~ 403 (426)
T 1xzw_A 324 HSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSW 403 (426)
T ss_dssp SSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEE
T ss_pred hhheeeeeecCccccccCCccccccCCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEE
Confidence 99999999999998888999998888999999999999999876556777899999999999999999999999999999
Q ss_pred EEcCCCCeeeeeEEEEEeCcccC
Q 011680 438 NRNDDGNKVTTDSVVFHNQYWSN 460 (479)
Q Consensus 438 ~~~~dg~~~~~D~~~i~~~~~~~ 460 (479)
++++||+.++.|+|||.|+||.|
T Consensus 404 ~~~~dg~~~~~D~~~i~~~~~~~ 426 (426)
T 1xzw_A 404 HRNQDGASVEADSLWLLNRYWAS 426 (426)
T ss_dssp EETTSCTTCCSEEEEEECSCC--
T ss_pred EECCCCCEEEeEEEEEEecccCC
Confidence 99999998899999999999976
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-78 Score=629.77 Aligned_cols=421 Identities=58% Similarity=1.038 Sum_probs=371.8
Q ss_pred cCccCcCccccCCCCCCCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEE
Q 011680 43 ADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIH 122 (479)
Q Consensus 43 ~~~p~~~~~~~~p~~~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 122 (479)
.|||++++++++|++.++|+||||++|++++++|+|+|+|.+.++.+.|+|++.++.+..++.|++++|++.++.++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 80 (424)
T 2qfp_A 1 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIH 80 (424)
T ss_dssp CBCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEE
T ss_pred CCCCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEE
Confidence 37999999999999999999999999998889999999998877889999999988888888898888876667889999
Q ss_pred EEEecCCCCCcEEEEEeCCCCccceEEEECCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHHh--CCCEEEEcCccccc
Q 011680 123 HCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYA 200 (479)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~g~~~~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~--~pD~vl~~GDl~y~ 200 (479)
+|+|+||+|||+|+|||+.+..++.++|+|+|.+++..++||+++||+|.......+++++.+. +|||||++||++|.
T Consensus 81 ~v~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~ 160 (424)
T 2qfp_A 81 HTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYA 160 (424)
T ss_dssp EEEECSCCTTCEEEEEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCG
T ss_pred EEEECCCCCCCEEEEEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccc
Confidence 9999999999999999998766789999999988777899999999999876556678888776 89999999999998
Q ss_pred CCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEE
Q 011680 201 DRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHI 280 (479)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~f 280 (479)
+++...+ ...|+.|.++++++.+.+|+++++||||+...+..++...|..|..+|.||..+.....+.||+|++|+++|
T Consensus 161 ~~~~~~~-~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~ 239 (424)
T 2qfp_A 161 DRYPNHD-NVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHI 239 (424)
T ss_dssp GGSGGGC-THHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEE
T ss_pred ccccccc-chHHHHHHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEE
Confidence 7654444 678999999999988889999999999986533222233567888899999876555678899999999999
Q ss_pred EEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccc
Q 011680 281 IVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (479)
Q Consensus 281 i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~y 360 (479)
|+||++..++.+.+|++||+++|+++++++++|+||++|+|++++...++.+...+++.|+++|.+++||++|+||+|.|
T Consensus 240 i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 319 (424)
T 2qfp_A 240 IVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAY 319 (424)
T ss_dssp EECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSE
T ss_pred EEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhh
Confidence 99999987777789999999999998766789999999999998765555567788999999999999999999999999
Q ss_pred eeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEc
Q 011680 361 ERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRN 440 (479)
Q Consensus 361 er~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~ 440 (479)
+|+.|+++..+.+.+|+|.++.+++|++||++|+||+.++....+..++|+|++|++.+|||++|+|.|++++.|+|+++
T Consensus 320 ~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~ 399 (424)
T 2qfp_A 320 ERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRN 399 (424)
T ss_dssp EEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEET
T ss_pred heeccccCcceeccCCccccccCCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEEC
Confidence 99999999887788899988889999999999999999887556777899999999999999999999999999999999
Q ss_pred CCCCeeeeeEEEEEeCcccChhhh
Q 011680 441 DDGNKVTTDSVVFHNQYWSNNLRR 464 (479)
Q Consensus 441 ~dg~~~~~D~~~i~~~~~~~~~~~ 464 (479)
+||++++.|+|||.|+||.|.+++
T Consensus 400 ~~g~~~~~D~~~i~~~~~~~~~~~ 423 (424)
T 2qfp_A 400 QDGVAVEADSVWFFNRHWYPVDDS 423 (424)
T ss_dssp TSCTTCCSEEEEEECTTTCCCCCC
T ss_pred CCCCEEeeeEEEEEeccccccccC
Confidence 999977799999999999997654
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=358.44 Aligned_cols=358 Identities=17% Similarity=0.171 Sum_probs=242.6
Q ss_pred CceEEEeecCCCCCcEEEEEEcCCCC---------CccEEEEEecCCCCc--ceEEeeEEEEeeeccccceEEEEEecCC
Q 011680 61 PQQVRITQGDYDGKAVIISWVTPNEL---------GSNRVQYGKLEKKYD--SSAEGTVTNYTFYKYKSGYIHHCLVDDL 129 (479)
Q Consensus 61 P~~v~lt~~~~~~~~~~i~W~t~~~~---------~~~~V~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~h~v~l~gL 129 (479)
|...-+..| ||..+.+|.|++..+. .+.+|+|..+.+... ....|+..+. ...+++|+|+|+||
T Consensus 8 ~f~~GvasG-Dp~~~~vilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~----~~~~~t~~v~v~gL 82 (527)
T 2yeq_A 8 PFTLGVASG-DPLSDSVVLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAK----PSLAHSVHVEADGL 82 (527)
T ss_dssp SCTTCEEEE-CCCSSCEEEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEEC----GGGTTEEEEEECSC
T ss_pred Ccccccccc-CCCCCeEEEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEec----CCCceEEEeecCCc
Confidence 444445555 5556777999998631 356788877665543 3444544443 35789999999999
Q ss_pred CCCcEEEEEeCC-CCccceEEEECCCCCCCC-CCeEEEEEecCCCCCChHHHHHHHHHhCCCEEEEcCcccccCCCCC--
Q 011680 130 EYDTKYYYKIGD-GDSSREFWFQTPPKIHPD-APYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEY-- 205 (479)
Q Consensus 130 ~p~t~Y~Y~v~~-g~~~~~~~F~T~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~~~~~~pD~vl~~GDl~y~~~~~~-- 205 (479)
+|||+|+|||+. +..+++++|+|+|.++.. .+++|+++||.+.......++.+|.+.+||||||+||++|+++...
T Consensus 83 ~P~t~Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~ 162 (527)
T 2yeq_A 83 EPNKVYYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYV 162 (527)
T ss_dssp CTTCEEEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSC
T ss_pred CCCCEEEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCccc
Confidence 999999999986 445789999999987654 7899999999987545567888888889999999999999986321
Q ss_pred -----------------CchhhhHHHHH--HHHHHHhhcCCeEEcCCCcccccCCCCCccc------cc-----cccccc
Q 011680 206 -----------------NDVGIRWDSWG--RFIEQSAAYQPWIWSAGNHEIEFMPNMGEVI------PF-----KSYLHR 255 (479)
Q Consensus 206 -----------------~~~~~~~~~~~--~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~------~~-----~~~~~~ 255 (479)
.+|..+|..+. ..++.+.+.+|||+++||||+..+...+... .| .+++.+
T Consensus 163 ~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay 242 (527)
T 2yeq_A 163 SKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAY 242 (527)
T ss_dssp CTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHH
T ss_pred ccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHH
Confidence 01122333332 3467788899999999999997542111000 01 234444
Q ss_pred c-cCCcCCC----CCCCCceEEEEcCe-EEEEEeecCCCCC----------------------CCHHHHHHHHHHHhhcc
Q 011680 256 I-ATPYTAS----KSTNPLWYAIRRAS-AHIIVLSSYSPYV----------------------KYTPQWWWLREELKKVD 307 (479)
Q Consensus 256 f-~~P~~~~----~~~~~~yysf~~g~-v~fi~Lds~~~~~----------------------~~~~Q~~WL~~~L~~~~ 307 (479)
| .||.+.. +.....||+|++|+ ++|||||++.... .+.+|++||+++|++
T Consensus 243 ~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~-- 320 (527)
T 2yeq_A 243 YEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGS-- 320 (527)
T ss_dssp HHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHH--
T ss_pred HHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhc--
Confidence 4 3665421 12356899999999 9999999965211 368999999999998
Q ss_pred cCCCCeEEEEecccccccCCC----------CCCCCHHHHHHHHHHHHHcCCc--EEEEcccccceeeeeeeCCeecccC
Q 011680 308 REKTPWLIVLMHVPLYSSNVV----------HYMEGESMRAVFESWFVHSRVD--FIFAGHVHAYERSYRISNIHYNFTS 375 (479)
Q Consensus 308 ~~~~~w~IV~~H~P~~~~~~~----------~~~~~~~~r~~l~~l~~~~~Vd--lvlsGH~H~yer~~p~~~~~~~i~~ 375 (479)
++++|+||++|+|++..... .+......|+.|+++|.+++|+ +||+||+|.++++......
T Consensus 321 -s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~------ 393 (527)
T 2yeq_A 321 -STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDF------ 393 (527)
T ss_dssp -CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESST------
T ss_pred -CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccc------
Confidence 67899999999999875421 1222456799999999999984 9999999999998632110
Q ss_pred CcccccCCCC----CCeEEEeC--CCCCCCCCCC---CCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEc
Q 011680 376 GDRYPVPDKS----APVYLTVG--DGGNQEGLAG---RFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRN 440 (479)
Q Consensus 376 g~~~~~~~~~----g~~yi~~G--~gG~~~~~~~---~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~ 440 (479)
.++. ++-+++++ ++|....... .+...+| ...|.+...||++|+| +...++++|+..
T Consensus 394 ------~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np-~~~~~~~~~Gy~~v~v-t~~~~~~~~~~v 459 (527)
T 2yeq_A 394 ------EKTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENP-HIQFFNDYRGYVRCTV-TPHQWKADYRVM 459 (527)
T ss_dssp ------TCTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCT-TEEEEEBCEEEEEEEE-ETTEEEEEEEEE
T ss_pred ------cCCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCC-cceeeeCCCCEEEEEE-eccEEEEEEEEe
Confidence 1222 23333222 1111110000 0011234 3456667899999999 456688888743
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=301.43 Aligned_cols=255 Identities=15% Similarity=0.195 Sum_probs=185.1
Q ss_pred CCeEEEEEecCCCCCChHHH----HHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHH-HHHHHHH--hhcCCeEEc
Q 011680 160 APYTFGIIGDLGQTYNSLST----LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSW-GRFIEQS--AAYQPWIWS 231 (479)
Q Consensus 160 ~~~~f~~~gD~~~~~~~~~~----l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~-~~~~~~l--~~~~P~~~v 231 (479)
.+++|+++||+|.+...+.. +.++.+. +|||||++||++|. +....+ ..+|.+. .+.+..+ ...+||+++
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~~~-d~~~~~~f~~~~~~~~~~~~~P~~~v 79 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVKGLN-DPAWKNLYEDVYSEEKGDMYMPFFTV 79 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCSTT-CTHHHHHTTTTSCCGGGTTCSEEEEC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCcCc-cHHHHHHHHHHhhhhhhhhCCCEEEe
Confidence 46999999999976544332 2233333 99999999999998 432223 4455542 2223222 347899999
Q ss_pred CCCcccccCCCCCcc-----------------cccccccccccCCcCCCCCCCCceEEE----Ec---------C----e
Q 011680 232 AGNHEIEFMPNMGEV-----------------IPFKSYLHRIATPYTASKSTNPLWYAI----RR---------A----S 277 (479)
Q Consensus 232 ~GNHD~~~~~~~~~~-----------------~~~~~~~~~f~~P~~~~~~~~~~yysf----~~---------g----~ 277 (479)
+||||+..+....-. ........||.||. .||+| .. | .
T Consensus 80 lGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~~~ 151 (342)
T 3tgh_A 80 LGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKDLA 151 (342)
T ss_dssp CCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEEEE
T ss_pred CCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCCce
Confidence 999998643211000 00122456788884 57765 32 3 4
Q ss_pred EEEEEeecCCCCCC----------CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc
Q 011680 278 AHIIVLSSYSPYVK----------YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS 347 (479)
Q Consensus 278 v~fi~Lds~~~~~~----------~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~ 347 (479)
++||+|||...... ..+|++||+++|++ ++|+||++|||+|+++.. +....+++.|+++|.++
T Consensus 152 v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~~ll~~~ 224 (342)
T 3tgh_A 152 AAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS--RGSSYLAYYLLPLLKDA 224 (342)
T ss_dssp EEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--CCCHHHHHHTHHHHHHT
T ss_pred EEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--CCcHHHHHHHHHHHHHc
Confidence 99999999753211 25899999999954 479999999999987643 33567899999999999
Q ss_pred CCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEE
Q 011680 348 RVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEI 427 (479)
Q Consensus 348 ~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v 427 (479)
+|+++|+||+|.|+|..+ .|+.||++|+||..... .. ..++|++|+...+||++|++
T Consensus 225 ~VdlvlsGH~H~~~~~~~-------------------~g~~~iv~Ga~g~~~~~--~~--~~~~~s~f~~~~~Gf~~l~v 281 (342)
T 3tgh_A 225 EVDLYISGHDNNMEVIED-------------------NDMAHITCGSGSMSQGK--SG--MKNSKSLFFSSDIGFCVHEL 281 (342)
T ss_dssp TCCEEEECSSSSEEEEEE-------------------TTEEEEEECCSSCCCCC--CS--SCCTTEEEEECSSEEEEEEE
T ss_pred CCCEEEECCCcceeEEee-------------------CCcEEEEeCcccccccc--CC--CCCCcceeecCCCcEEEEEE
Confidence 999999999999999863 45899999999876532 11 23568999999999999999
Q ss_pred ecCceEEEEEEEcCCCCeeeeeEEEEEeCc
Q 011680 428 KNRTHAFYHWNRNDDGNKVTTDSVVFHNQY 457 (479)
Q Consensus 428 ~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~ 457 (479)
+++.+.++|+.+.+|+ +.|+++|.|+-
T Consensus 282 -~~~~l~~~~~~~~~G~--vld~~~i~k~~ 308 (342)
T 3tgh_A 282 -SNNGIVTKFVSSKKGE--VIYTHKLNIKK 308 (342)
T ss_dssp -ETTEEEEEEEETTTTE--EEEEEEEECCC
T ss_pred -ECCEEEEEEEECCCCc--EEEEEEEECCC
Confidence 4567999998768999 89999999974
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=261.33 Aligned_cols=257 Identities=18% Similarity=0.247 Sum_probs=175.5
Q ss_pred CCCeEEEEEecCCCCCC-------h---HHHHHHHHH-hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHH-----
Q 011680 159 DAPYTFGIIGDLGQTYN-------S---LSTLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS----- 222 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~-------~---~~~l~~~~~-~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l----- 222 (479)
..++||+++||+|.... . ...+..+.+ .+||+||++||++|..+..... ..+ |.+.++.+
T Consensus 4 ~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~-~~~---~~~~~~~~~~~~~ 79 (313)
T 1ute_A 4 TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-DKR---FQETFEDVFSDPS 79 (313)
T ss_dssp CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-CTH---HHHHTTTTSCSGG
T ss_pred CCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcc-hHH---HHHHHHHHcCchh
Confidence 35799999999998642 1 123333333 3999999999999976532212 222 33333322
Q ss_pred hhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEc------CeEEEEEeecCCCC-------
Q 011680 223 AAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRR------ASAHIIVLSSYSPY------- 289 (479)
Q Consensus 223 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~------g~v~fi~Lds~~~~------- 289 (479)
.+.+|+++++||||+..... ....|.....+|.+| ..||++.+ ++++||+||+....
T Consensus 80 l~~~p~~~v~GNHD~~~~~~--~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~ 149 (313)
T 1ute_A 80 LRNVPWHVLAGNHDHLGNVS--AQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFV 149 (313)
T ss_dssp GTTCCEEECCCHHHHHSCHH--HHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGST
T ss_pred hcCCCEEEECCCCccCCCcc--ccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCcccc
Confidence 12689999999999743210 001122223345455 35888887 58999999985410
Q ss_pred ----------CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccccc
Q 011680 290 ----------VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359 (479)
Q Consensus 290 ----------~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ 359 (479)
..+.+|++||+++|++. ..+|+||++|+|+++.... .....+++.+.++|.+++|+++|+||+|.
T Consensus 150 ~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l~GH~H~ 224 (313)
T 1ute_A 150 SQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHN 224 (313)
T ss_dssp TCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSS
T ss_pred ccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEEECChhh
Confidence 01478999999999984 4589999999999876542 22446678999999999999999999999
Q ss_pred ceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeC----cccEEEEEEecCceEEE
Q 011680 360 YERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREA----SYGHSTLEIKNRTHAFY 435 (479)
Q Consensus 360 yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~----~~G~~~l~v~~~~~~~~ 435 (479)
+++..+ .+|+.||++|++|.............+.+..|... ..||++|+|. ++.+.+
T Consensus 225 ~~~~~~------------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~-~~~~~~ 285 (313)
T 1ute_A 225 LQYLQD------------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEIT-PKEMSV 285 (313)
T ss_dssp EEEEEC------------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEEC-SSCEEE
T ss_pred hhhccC------------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEEE-cCEEEE
Confidence 998752 45789999999986543211000001134555432 3899999994 557899
Q ss_pred EEEEcCCCCeeeeeEEEEEeC
Q 011680 436 HWNRNDDGNKVTTDSVVFHNQ 456 (479)
Q Consensus 436 ~~~~~~dg~~~~~D~~~i~~~ 456 (479)
+|+. .+|+ +.|+++|.|.
T Consensus 286 ~~~~-~~g~--~~~~~~l~~~ 303 (313)
T 1ute_A 286 TYIE-ASGK--SLFKTKLPRR 303 (313)
T ss_dssp EEEE-TTSC--EEEEEEECCC
T ss_pred EEEc-CCCc--EEEEEEeccc
Confidence 9876 5888 8999999887
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.5e-23 Score=203.48 Aligned_cols=238 Identities=19% Similarity=0.163 Sum_probs=159.8
Q ss_pred CCCCeEEEEEecCCCCCC---------hH----HHHHHHHH--hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHH
Q 011680 158 PDAPYTFGIIGDLGQTYN---------SL----STLKHYMQ--SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS 222 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~---------~~----~~l~~~~~--~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l 222 (479)
+..++||+++||+|.... .. ..++.+.+ .++|+||++||+++.+. ...+..+.+.++.+
T Consensus 22 ~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~l 95 (330)
T 3ib7_A 22 PRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE------PAAYRKLRGLVEPF 95 (330)
T ss_dssp CCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC------HHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHHH
Confidence 456899999999997421 12 34455555 48999999999998755 56666777777766
Q ss_pred hh--cCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC----CCCHHHH
Q 011680 223 AA--YQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY----VKYTPQW 296 (479)
Q Consensus 223 ~~--~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~----~~~~~Q~ 296 (479)
.. .+|+++++||||+. . .+...+... .......+|++++++++||+||+.... ....+|+
T Consensus 96 ~~~~~~pv~~v~GNHD~~--------~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~ 161 (330)
T 3ib7_A 96 AAQLGAELVWVMGNHDDR--------A---ELRKFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQL 161 (330)
T ss_dssp HHHHTCEEEECCCTTSCH--------H---HHHHHHHCC---CCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHH
T ss_pred HhhcCCCEEEeCCCCCCH--------H---HHHHHhccc---ccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHH
Confidence 43 78999999999962 1 111112100 011235689999999999999997532 2368999
Q ss_pred HHHHHHHhhcccCCCCeEEEEecccccccCCCCC-CCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccC
Q 011680 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTS 375 (479)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~-~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~ 375 (479)
+||++.|++. ....+|+++|||++....... ......++.+.+++.+++++++|+||+|..+...
T Consensus 162 ~wl~~~l~~~---~~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~----------- 227 (330)
T 3ib7_A 162 GWLAEELATP---APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT----------- 227 (330)
T ss_dssp HHHHHHTTSC---CTTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE-----------
T ss_pred HHHHHHHHhc---ccCCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce-----------
Confidence 9999999985 334488899999876542211 0111225678899999999999999999987542
Q ss_pred CcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCC
Q 011680 376 GDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDG 443 (479)
Q Consensus 376 g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg 443 (479)
-+|+.+++.|+.+..... ..+. ..........||.+|++.++ .+.++++.-..+
T Consensus 228 --------~~g~~~~~~gs~~~~~~~----~~~~-g~~~~~~~~~gy~iv~i~~~-~~~~~~v~~~~~ 281 (330)
T 3ib7_A 228 --------FVGIPVSVASATCYTQDL----TVAA-GGTRGRDGAQGCNLVHVYPD-TVVHSVIPLGGG 281 (330)
T ss_dssp --------ETTEEEEECCCSSCEECT----TSCT-TCCCEESCSCEEEEEEECSS-CEEEEEEECSCC
T ss_pred --------ECCEEEEecCcceeccCC----CCCC-cceeccCCCCceEEEEEECC-CeEEEEeccCCC
Confidence 246677887777654321 0011 11122344579999999654 477888764443
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7.7e-22 Score=190.82 Aligned_cols=229 Identities=12% Similarity=0.053 Sum_probs=148.6
Q ss_pred eEEEEEecCCCCC---------ChHHHHH----HHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC
Q 011680 162 YTFGIIGDLGQTY---------NSLSTLK----HYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (479)
Q Consensus 162 ~~f~~~gD~~~~~---------~~~~~l~----~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~ 226 (479)
+||++++|+|... .....++ .+.+. ++|+||++||+++.+. ...|+.+.+.++.+ .+
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~l--~~ 72 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR------PEEYQVARQILGSL--NY 72 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC------HHHHHHHHHHHTTC--SS
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHhc--CC
Confidence 5899999999874 2223343 34443 6899999999998654 44555555555543 67
Q ss_pred CeEEcCCCcccccCCCCCccccc-ccccccc-cCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC----CCCHHHHHHHH
Q 011680 227 PWIWSAGNHEIEFMPNMGEVIPF-KSYLHRI-ATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY----VKYTPQWWWLR 300 (479)
Q Consensus 227 P~~~v~GNHD~~~~~~~~~~~~~-~~~~~~f-~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~----~~~~~Q~~WL~ 300 (479)
|+++++||||... .+ ..+...| ..+.+ .+..+|+++.++++||+||+.... ....+|++||+
T Consensus 73 p~~~v~GNHD~~~--------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~ 140 (274)
T 3d03_A 73 PLYLIPGNHDDKA--------LFLEYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLE 140 (274)
T ss_dssp CEEEECCTTSCHH--------HHHHHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHH
T ss_pred CEEEECCCCCCHH--------HHHHHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHH
Confidence 9999999999631 11 1111111 11111 023578999999999999997532 23589999999
Q ss_pred HHHhhcccCCCCeEEEEecccccccCCCCC-CCCHHHHHHHHHHHHHc-CCcEEEEcccccceeeeeeeCCeecccCCcc
Q 011680 301 EELKKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSYRISNIHYNFTSGDR 378 (479)
Q Consensus 301 ~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~-~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~ 378 (479)
+.|++. +.+++|+++|+|++....... .......+.+.+++.++ +|+++|+||+|..+...
T Consensus 141 ~~l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~-------------- 203 (274)
T 3d03_A 141 AQLFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ-------------- 203 (274)
T ss_dssp HHHHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE--------------
T ss_pred HHHHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe--------------
Confidence 999984 356899999999986542111 00112246788899998 89999999999987653
Q ss_pred cccCCCCCCeEEEe-CCCCCCCCCCCCCCCCCCCC-ceeeeCcccEEEEEEecCceEEEEEEEc
Q 011680 379 YPVPDKSAPVYLTV-GDGGNQEGLAGRFLDPQPNY-SAFREASYGHSTLEIKNRTHAFYHWNRN 440 (479)
Q Consensus 379 ~~~~~~~g~~yi~~-G~gG~~~~~~~~~~~~~p~~-s~~~~~~~G~~~l~v~~~~~~~~~~~~~ 440 (479)
..|..++++ |+++.... . .+.+ +.+.....||..+++.++ .+.+++++.
T Consensus 204 -----~~g~~~~~~pg~~~~~~~-----~--~~~~~~~~~~~~~gy~i~~i~~~-~~~~~~~~~ 254 (274)
T 3d03_A 204 -----YRQALISTLPGTVHQVPY-----C--HADTDPYYDLSPASCLMHRQVGE-QWVSYQHSL 254 (274)
T ss_dssp -----ETTEEEEECCCSSCBCCC-----C--SSCCSCEEBCCCCEEEEEEEETT-EEEEEEEEC
T ss_pred -----ECCEEEEEcCCcceeecc-----C--CCccccccccCCCceEEEEEeCC-cEEEEEEec
Confidence 124445554 33443211 0 1111 234445689999999665 578888764
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-22 Score=197.14 Aligned_cols=227 Identities=19% Similarity=0.156 Sum_probs=146.0
Q ss_pred CCCeEEEEEecCCCCCCh----------------HHHH----HHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHH
Q 011680 159 DAPYTFGIIGDLGQTYNS----------------LSTL----KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRF 218 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~~----------------~~~l----~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~ 218 (479)
...+||+++||+|..... ...+ +.+.+.+||+||++||+++..... . ...++.+...
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~--~-~~~~~~~~~~ 79 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRR--R-DASDRALDTV 79 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHH--T-TCHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCc--c-hHHHHHHHHH
Confidence 346999999999987521 1233 333345899999999999764300 0 1124444444
Q ss_pred HHHHhh-cCCeEEcCCCcccccCCCCCccccccccccccc-------------CCcCCCCCCCCceEEEEc-CeEEEEEe
Q 011680 219 IEQSAA-YQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIA-------------TPYTASKSTNPLWYAIRR-ASAHIIVL 283 (479)
Q Consensus 219 ~~~l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~-------------~P~~~~~~~~~~yysf~~-g~v~fi~L 283 (479)
++.+.. .+|+++++||||+.... ...+...+. +|. .+..||+|+. ++++||+|
T Consensus 80 ~~~l~~~~~p~~~v~GNHD~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~l 147 (322)
T 2nxf_A 80 MAELDACSVDVHHVWGNHEFYNFS-------RPSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVLL 147 (322)
T ss_dssp HHHHHTTCSEEEECCCHHHHHHCC-------HHHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEEC
T ss_pred HHHHHhcCCcEEEecCCCCcccCC-------HHHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEEE
Confidence 444432 67999999999973210 011222221 221 1356899998 89999999
Q ss_pred ecCCC-------------------------C---------------------CCCHHHHHHHHHHHhhcccCCCCeEEEE
Q 011680 284 SSYSP-------------------------Y---------------------VKYTPQWWWLREELKKVDREKTPWLIVL 317 (479)
Q Consensus 284 ds~~~-------------------------~---------------------~~~~~Q~~WL~~~L~~~~~~~~~w~IV~ 317 (479)
|+... + ....+|++||+++|+++.+ ...++||+
T Consensus 148 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv~ 226 (322)
T 2nxf_A 148 DAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIF 226 (322)
T ss_dssp CTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEE
T ss_pred cCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEEE
Confidence 98642 0 0237899999999998532 14578999
Q ss_pred ecccccccCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCC
Q 011680 318 MHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGG 396 (479)
Q Consensus 318 ~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG 396 (479)
+|+|++........ ....++.+.+++.++ +|+++|+||+|.+++.. +..|+.|++.|+.-
T Consensus 227 ~H~p~~~~~~~~~~-~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~------------------~~~g~~~i~~~~~~ 287 (322)
T 2nxf_A 227 SHLPVHPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT------------------DSSGAQHITLEGVI 287 (322)
T ss_dssp ESSCCCTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE------------------CTTSCEEEECCCGG
T ss_pred EccCCCCCCCCccc-cccCHHHHHHHHhcCCCeEEEEcCCcCCCCcee------------------ccCCceEEEecchh
Confidence 99999875532110 111256788999999 79999999999999863 13467788776541
Q ss_pred CCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEE
Q 011680 397 NQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWN 438 (479)
Q Consensus 397 ~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~ 438 (479)
. . + ....||.++++.++ .+.+..+
T Consensus 288 ~--~---------~------~~~~~y~~v~~~~~-~~~~~~~ 311 (322)
T 2nxf_A 288 E--T---------P------PHSHAFATAYLYED-RMVMKGR 311 (322)
T ss_dssp G--C---------C------TTSCEEEEEEECSS-EEEEEEE
T ss_pred h--C---------C------CCCCcEEEEEEECC-eEEEEec
Confidence 1 0 0 12358999999654 4665543
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-18 Score=178.81 Aligned_cols=199 Identities=14% Similarity=0.107 Sum_probs=126.7
Q ss_pred CCCCeEEEEEecCCCCCC-----------------------hHHHHHHH----HHhCCCEEEEcCcccccCCCCCCchhh
Q 011680 158 PDAPYTFGIIGDLGQTYN-----------------------SLSTLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGI 210 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~-----------------------~~~~l~~~----~~~~pD~vl~~GDl~y~~~~~~~~~~~ 210 (479)
.+.++||++++|+|.... ....++.+ .+.+||+||++||+++.+. ..
T Consensus 36 ~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~------~~ 109 (443)
T 2xmo_A 36 KDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGE------KT 109 (443)
T ss_dssp SCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCC------HH
T ss_pred CCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCC------HH
Confidence 456799999999998532 12334433 3449999999999998654 44
Q ss_pred hHHHHHHHHHHHhh-cCCeEEcCCCcccccCCCCC--c-------ccccccccccccCCcC-CC---CCCCCceEEEEcC
Q 011680 211 RWDSWGRFIEQSAA-YQPWIWSAGNHEIEFMPNMG--E-------VIPFKSYLHRIATPYT-AS---KSTNPLWYAIRRA 276 (479)
Q Consensus 211 ~~~~~~~~~~~l~~-~~P~~~v~GNHD~~~~~~~~--~-------~~~~~~~~~~f~~P~~-~~---~~~~~~yysf~~g 276 (479)
.++.+.+.++.+.. .+|+++++||||+....... . ......|...|..... .. ......|+.+..+
T Consensus 110 ~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 189 (443)
T 2xmo_A 110 SHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSS 189 (443)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBS
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCC
Confidence 56666666666643 68999999999974321100 0 0001122222221100 00 0011234445678
Q ss_pred eEEEEEeecCCCC------------CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCC-CCCHHHHHHHHHH
Q 011680 277 SAHIIVLSSYSPY------------VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESW 343 (479)
Q Consensus 277 ~v~fi~Lds~~~~------------~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~-~~~~~~r~~l~~l 343 (479)
+++||+||+.... ....+|++||++.|+++.. ....+||++|+|++....... ......++.+.++
T Consensus 190 ~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~l 268 (443)
T 2xmo_A 190 KVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDA 268 (443)
T ss_dssp SEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHH
T ss_pred CEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCCcccccccccccccccHHHHHHH
Confidence 9999999997531 1358999999999988642 235789999999976432110 0011235678889
Q ss_pred HHHcCCcEEEEcccccceee
Q 011680 344 FVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 344 ~~~~~VdlvlsGH~H~yer~ 363 (479)
+.+++|+++|+||+|.....
T Consensus 269 l~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 269 LTEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHHTTCCEEEECSSCSCEEE
T ss_pred HHHcCCeEEEECCcccCchh
Confidence 99999999999999997754
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.57 E-value=3.2e-14 Score=133.11 Aligned_cols=169 Identities=9% Similarity=0.022 Sum_probs=96.6
Q ss_pred CeEEEEEecCCCCCChH-HHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cCCeEEcCCCcccc
Q 011680 161 PYTFGIIGDLGQTYNSL-STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEIE 238 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~-~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 238 (479)
++||+++||+|...... ..++.+.+.++|+||++||+++... . ...+. +.++.+.. ..|+++++||||..
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~----~-~~~~~---~~~~~l~~~~~pv~~v~GNHD~~ 76 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAA----K-SRDYA---AFFRILSEAHLPTAYVPGPQDAP 76 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTC----C-HHHHH---HHHHHHGGGCSCEEEECCTTSCS
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCC----C-HHHHH---HHHHHHHhcCCcEEEECCCCCch
Confidence 58999999999763322 2233333348999999999997652 1 33333 33444433 57999999999963
Q ss_pred cCCCCCcccccccccccc----cCCcCCCCCCCCceEEEEcC-eEEEEEeecCC--CCCCCHH--------HHHHHHHHH
Q 011680 239 FMPNMGEVIPFKSYLHRI----ATPYTASKSTNPLWYAIRRA-SAHIIVLSSYS--PYVKYTP--------QWWWLREEL 303 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~f----~~P~~~~~~~~~~yysf~~g-~v~fi~Lds~~--~~~~~~~--------Q~~WL~~~L 303 (479)
.. ......+ ..|.... ..+. .+.++ ++.|+.++... .+....+ +.+|+++.|
T Consensus 77 ~~---------~~~~~~~~~~~~~~~~~~--l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 143 (228)
T 1uf3_A 77 IW---------EYLREAANVELVHPEMRN--VHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKAL 143 (228)
T ss_dssp HH---------HHHHHHHHHHHHCTTEEE--CBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGG
T ss_pred hH---------HHHHhhhhhhccCcceEE--cccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHH
Confidence 10 1111111 0111000 0011 23445 78888887421 1111122 234445555
Q ss_pred hhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccc
Q 011680 304 KKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (479)
Q Consensus 304 ~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H 358 (479)
++. ...+.|+++|+|++....... + ...+.+++.+++++++++||+|
T Consensus 144 ~~~---~~~~~il~~H~p~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 144 WEL---KDYPKIFLFHTMPYHKGLNEQ--G---SHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp GGS---CSCCEEEEESSCBCBTTTBTT--S---BHHHHHHHHHHCCSEEEECCSS
T ss_pred HhC---CCCCeEEEEccCcccCCcccc--C---HHHHHHHHHHhCCCEEEEcccc
Confidence 553 234789999999976421111 1 1356667888899999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.49 E-value=7.4e-14 Score=133.66 Aligned_cols=181 Identities=12% Similarity=0.102 Sum_probs=98.6
Q ss_pred CeEEEEEecCCCCCChH-HHHHHHHHhCCCEEEEcCcccccCCCCCCchhh---------------h--------HHHHH
Q 011680 161 PYTFGIIGDLGQTYNSL-STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGI---------------R--------WDSWG 216 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~-~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~---------------~--------~~~~~ 216 (479)
++||+++||+|...... ..++.+.+.++|+||++||+++... . .. . .+.+.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~----~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 79 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEA----L-EKEYERAHLARREPNRKVIHENEHYIIETLD 79 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHH----H-HHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccC----c-chhhhhhhhhhcccchhhhhHHHHHHHHHHH
Confidence 58999999999875443 3445555559999999999997532 0 00 0 02234
Q ss_pred HHHHHHhh-cCCeEEcCCCcccccCCCCCccccccccccccc-CCcCCCCCCCCceEEEEcCeEEEEEeecCCCC-CCCH
Q 011680 217 RFIEQSAA-YQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIA-TPYTASKSTNPLWYAIRRASAHIIVLSSYSPY-VKYT 293 (479)
Q Consensus 217 ~~~~~l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~-~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~-~~~~ 293 (479)
+.++.+.. ..|+++++||||.... ..+........ .|.-. ...+ ...++++++.|++++..... ....
T Consensus 80 ~~l~~l~~~~~pv~~v~GNHD~~~~------~~~~~~~~~~~~~~~~~--~l~~-~~~~~~~~~~i~g~~~~~~~~~~~~ 150 (260)
T 2yvt_A 80 KFFREIGELGVKTFVVPGKNDAPLK------IFLRAAYEAETAYPNIR--VLHE-GFAGWRGEFEVIGFGGLLTEHEFEE 150 (260)
T ss_dssp HHHHHHHTTCSEEEEECCTTSCCHH------HHHHHHHHTTTTCTTEE--ECSS-EEEEETTTEEEEEECSEEESSCCBS
T ss_pred HHHHHHHhcCCcEEEEcCCCCchhh------hhHHHHhhhccCCcceE--EecC-cceEEECCEEEEecCCCcCCCCcCH
Confidence 44555543 5799999999996310 00000100000 00000 0001 12377889999999753210 0011
Q ss_pred HHH----HHHH----HHHhhcccCCCCeEEEEecccccccCCCCC--CCCHHHHHHHHHHHHHcCCcEEEEcccc
Q 011680 294 PQW----WWLR----EELKKVDREKTPWLIVLMHVPLYSSNVVHY--MEGESMRAVFESWFVHSRVDFIFAGHVH 358 (479)
Q Consensus 294 ~Q~----~WL~----~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~--~~~~~~r~~l~~l~~~~~VdlvlsGH~H 358 (479)
+++ .|+. +.|++. .....|+++|+|++....... .....-...+.+++.+++++++++||+|
T Consensus 151 ~~~~~~~~~~~~~~l~~l~~~---~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 151 DFVLKYPRWYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp SSSCEEEHHHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred HHHhhcchhhHHHHHHHHHhc---CCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 222 1443 333332 223569999999875311100 0000012356677888999999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2e-13 Score=136.21 Aligned_cols=235 Identities=14% Similarity=0.110 Sum_probs=122.3
Q ss_pred CCCeEEEEEecCCCC----CC---------hHHHHHHH----HHhCCCEEEEcCc-ccccCCCCCCchhhhHHHHHHHHH
Q 011680 159 DAPYTFGIIGDLGQT----YN---------SLSTLKHY----MQSGGQSVLFLGD-LSYADRYEYNDVGIRWDSWGRFIE 220 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~----~~---------~~~~l~~~----~~~~pD~vl~~GD-l~y~~~~~~~~~~~~~~~~~~~~~ 220 (479)
...+||++++|+|.+ .. ....++++ .+.+||+||++|| +++... + . ......+.++++
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~-~--~-~~~~~~~~~~l~ 91 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNN-P--S-VVALHDLLDYLK 91 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSC-C--C-HHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCC-C--C-HHHHHHHHHHHH
Confidence 357999999999976 21 12344444 3449999999999 665433 1 1 222344556666
Q ss_pred HHhhcCCeEEcCCCcccccCCCCCccccccccccc----ccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC-------
Q 011680 221 QSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHR----IATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY------- 289 (479)
Q Consensus 221 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~----f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~------- 289 (479)
.+...+|+++++||||... . . .+..+... +.+-.+.. ......++.+++.|++++.....
T Consensus 92 ~L~~~~pv~~i~GNHD~~~-~--~---~~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~glp~~~~~~~~~~~~ 162 (336)
T 2q8u_A 92 RMMRTAPVVVLPGNHDWKG-L--K---LFGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRILPFPYPDESEALRKNE 162 (336)
T ss_dssp HHHHHSCEEECCC-------C--H---HHHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEEEECCC-------CCS
T ss_pred HHHhcCCEEEECCCCCccc-c--c---cHHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEEECCCCCHHHHHHHhh
Confidence 6643489999999999642 1 0 01111110 11111000 00011223467888888743221
Q ss_pred CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHH-H-HHHHHHHHHHcCCcEEEEcccccceeeeeee
Q 011680 290 VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGES-M-RAVFESWFVHSRVDFIFAGHVHAYERSYRIS 367 (479)
Q Consensus 290 ~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~-~-r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~ 367 (479)
....+|++|+.+.|...-+....+.|+++|.|+....... .+. + ...+...+.+.++|++++||+|..+...
T Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~---~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~--- 236 (336)
T 2q8u_A 163 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA---GIEQGREIIINRALIPSVVDYAALGHIHSFREIQ--- 236 (336)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------CCCEECGGGSCTTSSEEEEESCSSCEEEE---
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC---CccchhhcccCHHHccccCCEEEEccccCceEeC---
Confidence 1125678999888865210134689999999987432110 000 0 0001112345689999999999987652
Q ss_pred CCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCC
Q 011680 368 NIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDD 442 (479)
Q Consensus 368 ~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~d 442 (479)
.++..+.+|+. ++. .++.. ...-||..+++.++....++++....
T Consensus 237 -----------------~~~~i~y~GS~---~~~---------s~~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~ 281 (336)
T 2q8u_A 237 -----------------KQPLTIYPGSL---IRI---------DFGEE-ADEKGAVFVELKRGEPPRYERIDASP 281 (336)
T ss_dssp -----------------ETTEEEECCCS---SCC---------SGGGT-TCCCEEEEEEEETTSCCEEEEEECCC
T ss_pred -----------------CCccEEECCCC---cCC---------Ccccc-CCCCEEEEEEEeCCCccEEEEEECCC
Confidence 01122334433 111 11110 11469999999766556788876543
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=6.2e-11 Score=120.39 Aligned_cols=177 Identities=15% Similarity=0.026 Sum_probs=95.6
Q ss_pred CCCCeEEEEEecCCCCCCh----------HHHHHHH----HHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh
Q 011680 158 PDAPYTFGIIGDLGQTYNS----------LSTLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~~----------~~~l~~~----~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~ 223 (479)
...++||+++||+|.+... ...++.+ .+.+||+||++||+++.... . ...+..+.+.++.+.
T Consensus 17 ~~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p---~-~~~~~~~~~~l~~L~ 92 (386)
T 3av0_A 17 RGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRP---P-VKALRIAMQAFKKLH 92 (386)
T ss_dssp -CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSC---C-HHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCC---C-HHHHHHHHHHHHHHH
Confidence 4567999999999987421 1233333 33489999999999876531 1 233445566677665
Q ss_pred h-cCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHH---
Q 011680 224 A-YQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWL--- 299 (479)
Q Consensus 224 ~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL--- 299 (479)
. .+|+++++||||....... ......+...+..-. ...++..+-+++.|++++...... .....+||
T Consensus 93 ~~~~pv~~v~GNHD~~~~~~~--~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l 163 (386)
T 3av0_A 93 ENNIKVYIVAGNHEMPRRLGE--ESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNF 163 (386)
T ss_dssp HTTCEEEECCCGGGSCSSTTS--CCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHH
T ss_pred hcCCcEEEEcCCCCCCccccc--cCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHh
Confidence 4 5899999999996432110 001011111010000 011222222568888888654321 12223333
Q ss_pred HHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 300 ~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
...+. ...+.|+++|+|+........... +. .+. ++|++++||+|..+
T Consensus 164 ~~~~~-----~~~~~Ill~H~~~~~~~~~~~~~~------~~-~l~--~~d~v~~GH~H~~~ 211 (386)
T 3av0_A 164 ESEAK-----NYKKKILMLHQGINPYIPLDYELE------HF-DLP--KFSYYALGHIHKRI 211 (386)
T ss_dssp HHHHH-----TCSSEEEEECCCCTTTSSSSCSSC------GG-GSC--CCSEEEECSCCSCE
T ss_pred hhhcc-----cCCCEEEEECcCccccCCCCcccC------HH-Hhh--hCCeEEccCCCCCc
Confidence 33222 234789999999853211111000 11 122 39999999999874
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.31 E-value=6.2e-11 Score=110.45 Aligned_cols=185 Identities=16% Similarity=0.185 Sum_probs=109.2
Q ss_pred CeEEEEEecCCCCCC---hHHHHHHHHH-hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcc
Q 011680 161 PYTFGIIGDLGQTYN---SLSTLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHE 236 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~---~~~~l~~~~~-~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 236 (479)
..|++++||+|.... ....+..+.+ .++|+||++||++. . ...+.++.+ ..|+++++||||
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~---------~----~~l~~l~~~--~~~v~~V~GNHD 89 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS---------Q----EYVEMLKNI--TKNVYIVSGDLD 89 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC---------H----HHHHHHHHH--CSCEEECCCTTC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC---------H----HHHHHHHHc--CCCEEEecCCCc
Confidence 589999999997642 2244555543 48999999999983 1 123334433 368999999999
Q ss_pred cccCCCCCcccccccccccc--cCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeE
Q 011680 237 IEFMPNMGEVIPFKSYLHRI--ATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWL 314 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~f--~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 314 (479)
.... . ....| .+| ... .. .....+
T Consensus 90 ~~~~-------~---~~~~~~~~lp---------~~~---------------------------------~~--~~~~~~ 115 (215)
T 2a22_A 90 SAIF-------N---PDPESNGVFP---------EYV---------------------------------VV--QIGEFK 115 (215)
T ss_dssp CSCC-------B---CCGGGTBCCC---------SEE---------------------------------EE--EETTEE
T ss_pred Cccc-------c---cChhhHhhCC---------ceE---------------------------------EE--ecCCeE
Confidence 6321 0 00000 000 000 00 012367
Q ss_pred EEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCC
Q 011680 315 IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGD 394 (479)
Q Consensus 315 IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~ 394 (479)
|+++|.+++.... . .+.+..++.+.++|++++||+|...... .+++.++..|+
T Consensus 116 i~l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vl~GHtH~~~~~~-------------------~~~~~~inpGS 168 (215)
T 2a22_A 116 IGLMHGNQVLPWD-----D---PGSLEQWQRRLDCDILVTGHTHKLRVFE-------------------KNGKLFLNPGT 168 (215)
T ss_dssp EEEECSTTSSSTT-----C---HHHHHHHHHHHTCSEEEECSSCCCEEEE-------------------ETTEEEEECCC
T ss_pred EEEEcCCccCCCC-----C---HHHHHHHHhhcCCCEEEECCcCCCccEe-------------------eCCEEEEECCc
Confidence 8899965543211 1 2355667777899999999999764321 13567777787
Q ss_pred CCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEe
Q 011680 395 GGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHN 455 (479)
Q Consensus 395 gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 455 (479)
.+.+... .+ .....+|++|++.++ .+.+++++-++|+ +.+.++.+.|
T Consensus 169 ~~~~~~~----~~--------~~~~~~y~il~i~~~-~i~~~~~~~~~~~-~~v~~~~~~~ 215 (215)
T 2a22_A 169 ATGAFSA----LT--------PDAPPSFMLMALQGN-KVVLYVYDLRDGK-TNVAMSEFSK 215 (215)
T ss_dssp SSCCCCT----TS--------TTCCCEEEEEEEETT-EEEEEEEEEETTE-EEEEEEEEEC
T ss_pred ccccCCC----CC--------CCCCCcEEEEEEeCC-cEEEEEEEecCCe-EEEEEEEeeC
Confidence 7643210 00 012358999999654 5778877655554 4566665543
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.5e-10 Score=105.86 Aligned_cols=180 Identities=13% Similarity=0.135 Sum_probs=108.5
Q ss_pred CCCeEEEEEecCCCCCC---hHHHHHHHHH-hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCC
Q 011680 159 DAPYTFGIIGDLGQTYN---SLSTLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~---~~~~l~~~~~-~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GN 234 (479)
....||+++||+|.... ....+..+.+ .++|+||++||++. . ...+.++.+ ..|+++++||
T Consensus 8 ~~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~---------~----~~~~~l~~~--~~~~~~v~GN 72 (192)
T 1z2w_A 8 RDRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT---------K----ESYDYLKTL--AGDVHIVRGD 72 (192)
T ss_dssp ---CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS---------H----HHHHHHHHH--CSEEEECCCT
T ss_pred ccceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC---------H----HHHHHHHhc--CCCEEEEcCC
Confidence 34489999999997532 2233433332 37999999999983 1 122333333 3589999999
Q ss_pred cccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeE
Q 011680 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWL 314 (479)
Q Consensus 235 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 314 (479)
||... .+|. ...++. ..++
T Consensus 73 hD~~~-----------------~lp~---------~~~~~~-----------------------------------~~~~ 91 (192)
T 1z2w_A 73 FDENL-----------------NYPE---------QKVVTV-----------------------------------GQFK 91 (192)
T ss_dssp TCCCT-----------------TSCS---------EEEEEE-----------------------------------TTEE
T ss_pred cCccc-----------------cCCc---------ceEEEE-----------------------------------CCEE
Confidence 99521 1221 111110 1367
Q ss_pred EEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCC
Q 011680 315 IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGD 394 (479)
Q Consensus 315 IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~ 394 (479)
|+++|.+++.... . .+.+..++.+.+++++++||+|...... .+++.++-.|+
T Consensus 92 i~l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vi~GHtH~~~~~~-------------------~~~~~~inpGS 144 (192)
T 1z2w_A 92 IGLIHGHQVIPWG-----D---MASLALLQRQFDVDILISGHTHKFEAFE-------------------HENKFYINPGS 144 (192)
T ss_dssp EEEECSCCCCBTT-----C---HHHHHHHHHHHSSSEEECCSSCCCEEEE-------------------ETTEEEEECCC
T ss_pred EEEECCCcCCCCC-----C---HHHHHHHHHhcCCCEEEECCcCcCccEe-------------------ECCEEEEECCc
Confidence 8889955543211 1 2345667777899999999999765321 24567777887
Q ss_pred CCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEe
Q 011680 395 GGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHN 455 (479)
Q Consensus 395 gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 455 (479)
.+.+... . + .....+|+.|++.++ .+.+++++-++++ +.+.++.+.|
T Consensus 145 ~~~~~~~---~-~--------~~~~~~y~il~~~~~-~~~~~~~~~~~~~-~~v~~~~~~~ 191 (192)
T 1z2w_A 145 ATGAYNA---L-E--------TNIIPSFVLMDIQAS-TVVTYVYQLIGDD-VKVERIEYKK 191 (192)
T ss_dssp TTCCCCS---S-C--------SCCCCEEEEEEEETT-EEEEEEEEEETTE-EEEEEEEEEC
T ss_pred ccccCCC---C-C--------cCCCCcEEEEEEECC-EEEEEEEEccCCE-EEEEEEEEcc
Confidence 7653210 0 0 012468999999654 5778887655554 5677777765
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=8.5e-12 Score=120.98 Aligned_cols=207 Identities=13% Similarity=0.062 Sum_probs=107.5
Q ss_pred CCCCeEEEEEecCCCCCChHHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 158 PDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
....+||+++||+|...... . -.++|+||++||+++.+. ......+.+.++.+ ...|+++++||||.
T Consensus 56 ~~~~mri~~iSD~H~~~~~l----~--i~~~D~vi~aGDl~~~g~------~~e~~~~~~~L~~l-~~~~v~~V~GNHD~ 122 (296)
T 3rl5_A 56 PAGHTRFVCISDTRSRTDGI----Q--MPYGDILLHTGDFTELGL------PSEVKKFNDWLGNL-PYEYKIVIAGNHEL 122 (296)
T ss_dssp CTTEEEEEEEBCCTTCCTTC----C--CCSCSEEEECSCCSSSCC------HHHHHHHHHHHHTS-CCSEEEECCCTTCG
T ss_pred CCCCeEEEEEeeCCCCcchh----c--cCCCCEEEECCcccCCCC------HHHHHHHHHHHHhC-CCCeEEEEcCCccc
Confidence 34569999999999864321 1 128999999999998654 33444444444443 22458999999998
Q ss_pred ccCCCCCcc---cccccccccccCCcC---CC-CCCCCce----EEEEcCeEEEEEeecCCCCCCC---HHHHHHHHHHH
Q 011680 238 EFMPNMGEV---IPFKSYLHRIATPYT---AS-KSTNPLW----YAIRRASAHIIVLSSYSPYVKY---TPQWWWLREEL 303 (479)
Q Consensus 238 ~~~~~~~~~---~~~~~~~~~f~~P~~---~~-~~~~~~y----ysf~~g~v~fi~Lds~~~~~~~---~~Q~~WL~~~L 303 (479)
..+...-+. ..+..+...-..+.. .. ....+.. -+.++++++|++..-...+... .++.+++.+.+
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~ 202 (296)
T 3rl5_A 123 TFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKW 202 (296)
T ss_dssp GGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHH
T ss_pred ccchhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHH
Confidence 543210000 000000000000000 00 0000111 2345678888885432222221 12223444444
Q ss_pred hhcccCCCCeEEEEecccccccCCCCCCCC-HHHHHHHHHHH-HHcCCcEEEEcccccceeeeeeeCCeecccCCccccc
Q 011680 304 KKVDREKTPWLIVLMHVPLYSSNVVHYMEG-ESMRAVFESWF-VHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPV 381 (479)
Q Consensus 304 ~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~-~~~r~~l~~l~-~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~ 381 (479)
... .....|+++|.|++...+...... ..-.+.+...+ .+++++++++||+|......
T Consensus 203 ~~i---p~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~----------------- 262 (296)
T 3rl5_A 203 NLI---PEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM----------------- 262 (296)
T ss_dssp TTS---CTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE-----------------
T ss_pred hhC---CCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceE-----------------
Confidence 433 234568999999987643210000 00012344445 58899999999999753221
Q ss_pred CCCCCCeEEEeCCCCCC
Q 011680 382 PDKSAPVYLTVGDGGNQ 398 (479)
Q Consensus 382 ~~~~g~~yi~~G~gG~~ 398 (479)
..+++++|-.|+-|..
T Consensus 263 -~~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 263 -TDGYTTYINASTCTVS 278 (296)
T ss_dssp -ECSSCEEEECBCSCTT
T ss_pred -EECCEEEEECCcCCcC
Confidence 1245677777777654
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.25 E-value=7.2e-11 Score=119.54 Aligned_cols=189 Identities=14% Similarity=0.159 Sum_probs=102.3
Q ss_pred eEEEEEecCCCCCC----h---------HHHHHHHH----HhCCCEEEEcCccc-ccCCCCCCchhhhHHHHHHHHHHHh
Q 011680 162 YTFGIIGDLGQTYN----S---------LSTLKHYM----QSGGQSVLFLGDLS-YADRYEYNDVGIRWDSWGRFIEQSA 223 (479)
Q Consensus 162 ~~f~~~gD~~~~~~----~---------~~~l~~~~----~~~pD~vl~~GDl~-y~~~~~~~~~~~~~~~~~~~~~~l~ 223 (479)
+||++++|+|.+.. . ...++++. +.+||+||++||++ +... + . ...+..+.+.+..+.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~-~--~-~~~~~~~~~~l~~l~ 76 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNN-P--S-VVALHDLLDYLKRMM 76 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSS-C--C-HHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCC-C--C-HHHHHHHHHHHHHHH
Confidence 48999999998753 1 23444443 34999999999999 4332 1 1 334455666666665
Q ss_pred hcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEE--cC-eEEEEEeecCCCCC----CCHHHH
Q 011680 224 AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIR--RA-SAHIIVLSSYSPYV----KYTPQW 296 (479)
Q Consensus 224 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~--~g-~v~fi~Lds~~~~~----~~~~Q~ 296 (479)
..+|+++++||||... ...+...... ++.+........-+.+. .| .+.|..+.-..... ....+.
T Consensus 77 ~~~~v~~i~GNHD~~~------~~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~ 148 (379)
T 3tho_B 77 RTAPVVVLPGNQDWKG------LKLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFR 148 (379)
T ss_dssp HHSCEEECCCTTSCTT------HHHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHH
T ss_pred hCCCEEEEcCCCcccc------Cccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchH
Confidence 4499999999999421 0001111110 11110000000112222 34 47777775432211 135678
Q ss_pred HHHHHHHhhc---ccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceee
Q 011680 297 WWLREELKKV---DREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 297 ~WL~~~L~~~---~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~ 363 (479)
+|+.+.|++. ......+.|+++|.++.........+. .+...+...+...++|+++.||.|..+..
T Consensus 149 ~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se~-~~~~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 149 FFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQ-GREIIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC--------CSCCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCCcc-ccccccCHHHcCcCCCEEEcccccCCeEe
Confidence 9999988731 112456789999999854322000000 00011212233468999999999998654
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.23 E-value=3.3e-11 Score=114.83 Aligned_cols=186 Identities=6% Similarity=-0.077 Sum_probs=99.8
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHH---Hh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCc
Q 011680 162 YTFGIIGDLGQTYNS-LSTLKHYM---QS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~-~~~l~~~~---~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 235 (479)
.|++++||+|..... ...++.+. +. ++|+||++||+++.+. + . .+..+.+..+....|+++++|||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~----~-~---~~~~~~l~~l~~~~~~~~v~GNh 73 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFP----Y-P---KEVIEVIKDLTKKENVKIIRGKY 73 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSS----C-H---HHHHHHHHHHHHHSCEEEECCHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCC----C-H---HHHHHHHHhhHhhcCeeEEecch
Confidence 589999999965322 23445555 55 7999999999997543 1 1 12334444444346899999999
Q ss_pred ccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC---CCCHHHHHHHHHHHhhcccCCCC
Q 011680 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY---VKYTPQWWWLREELKKVDREKTP 312 (479)
Q Consensus 236 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~---~~~~~Q~~WL~~~L~~~~~~~~~ 312 (479)
|..... +...+..+... . .++..... .... .+ ....+|++||++........-..
T Consensus 74 D~~~~~----------~~~~~~~~~~~------~--~~~~~~~~---~~~~-~~~~~~l~~~~~~~L~~lp~~~~~~~~~ 131 (252)
T 1nnw_A 74 DQIIAM----------SDPHATDPGYI------D--KLELPGHV---KKAL-KFTWEKLGHEGREYLRDLPIYLVDKIGG 131 (252)
T ss_dssp HHHHHH----------SCTTCSSSGGG------G--GSSCCHHH---HHHH-HHHHHHHHHHHHHHHHTSCSCEEEEETT
T ss_pred HHHhhc----------cccccCCcccc------c--chhhhHHH---HHHH-HHHHHHCCHHHHHHHHhCCceEEEeeCC
Confidence 963110 00000000000 0 00000000 0000 00 01357888987633322111123
Q ss_pred eEEEEecccccccC-CCCCCCCHHHHHHHHHHHHHc-CCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEE
Q 011680 313 WLIVLMHVPLYSSN-VVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYL 390 (479)
Q Consensus 313 w~IV~~H~P~~~~~-~~~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi 390 (479)
..|+++|++++... ....... ..+.+..++.++ +++++++||+|...... ..++++|
T Consensus 132 ~~i~~~H~~p~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~-------------------~~~~~~i 190 (252)
T 1nnw_A 132 NEVFGVYGSPINPFDGEVLAEQ--PTSYYEAIMRPVKDYEMLIVASPMYPVDAM-------------------TRYGRVV 190 (252)
T ss_dssp EEEEEESSCSSCTTTCCCCSSC--CHHHHHHHHGGGTTSSEEEESTTCSEEEEE-------------------ETTEEEE
T ss_pred cEEEEEcCCCCCCcccccCCCC--CHHHHHHHHhcCCCCCEEEECCccccceEe-------------------cCCeEEE
Confidence 57888898874322 1111111 124567778888 99999999999855432 1356778
Q ss_pred EeCCCCCC
Q 011680 391 TVGDGGNQ 398 (479)
Q Consensus 391 ~~G~gG~~ 398 (479)
..|+.|.+
T Consensus 191 n~Gs~~~~ 198 (252)
T 1nnw_A 191 CPGSVGFP 198 (252)
T ss_dssp EECCSSSC
T ss_pred ECCCccCC
Confidence 88887754
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.9e-10 Score=110.95 Aligned_cols=221 Identities=14% Similarity=0.102 Sum_probs=117.8
Q ss_pred CCCeEEEEEecCCCCCCh-HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 159 DAPYTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~~-~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
..+.|++++||+|..... ...++.+.+.++|.|+++||++..+. . . .+..+.+ ....|++.+.||||.
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~----~-~---~~~~~~l---~~~~~~~~v~GNhD~ 77 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGT----G-R---RRILDLL---DQLPITARVLGNWED 77 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSS----C-S---HHHHHHH---HTSCEEEECCCHHHH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC----C-H---HHHHHHH---HccCCEEEEcCChHH
Confidence 357999999999964321 22344444458999999999997544 1 1 2223333 333478999999996
Q ss_pred ccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEE
Q 011680 238 EFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVL 317 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~ 317 (479)
... ......+.++.. ...+.+ . .+ ....-....++++||++........-...+|++
T Consensus 78 ~~~---------~~~~~~~~~~~~-----~~~~~~----~----~~-~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~l 134 (270)
T 3qfm_A 78 SLW---------HGVRKELDSTRP-----SQRYLL----R----QC-QYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGI 134 (270)
T ss_dssp HHH---------HHHTTCSCTTSH-----HHHHHH----H----HH-HHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEE
T ss_pred HHH---------HhhccccCCCcH-----HHHHHH----H----HH-HHHHHHcCHHHHHHHHhCCCceEEEECCcEEEE
Confidence 311 000000000000 000000 0 00 000012347888998864333211112357788
Q ss_pred ecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCC
Q 011680 318 MHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGN 397 (479)
Q Consensus 318 ~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~ 397 (479)
+|..+.+.... ......-.+.+..++.+.++|++|+||+|.-.... ..++..+|-.|+.|.
T Consensus 135 vHg~p~~~~~~-~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~------------------~~~~~~~iNpGSvg~ 195 (270)
T 3qfm_A 135 SHHLPDKNWGR-ELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY------------------GTGGQLIVNPGSIGQ 195 (270)
T ss_dssp ESSBTTBSSSS-TTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE------------------CTTSCEEEEECCSSS
T ss_pred EECCCCCCCCc-eecCCCcHHHHHHHhcccCCCEEEECCcCchHhee------------------ccCCEEEEECCCccC
Confidence 88766432111 10011113466777888899999999999533221 134678888999987
Q ss_pred CCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcC
Q 011680 398 QEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRND 441 (479)
Q Consensus 398 ~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~ 441 (479)
+... .+.++ .+....|++|++.++....++|++..
T Consensus 196 pr~~-----~~~~~----~~~~asyaild~~~~~~~~v~~~rv~ 230 (270)
T 3qfm_A 196 PFFL-----DAQLR----KDLRAQYMILEFDDKGLVDMDFRRVD 230 (270)
T ss_dssp CCCS-----STTGG----GCCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCCC-----Ccccc----CCCCCEEEEEEecCCCceEEEEEEeC
Confidence 6431 11100 01135789999976544567777643
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.5e-09 Score=97.69 Aligned_cols=157 Identities=14% Similarity=0.110 Sum_probs=98.5
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHHh---CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 161 PYTFGIIGDLGQTYNSLSTLKHYMQS---GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l~~~~~~---~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
..|++++||+|.. ...++++.+. ++|+|+++||+.+. . ++.+. .|++.++||||.
T Consensus 6 ~m~i~~isD~H~~---~~~~~~~~~~~~~~~d~i~~~GD~~~~------~-----------l~~l~--~~~~~v~GNhD~ 63 (176)
T 3ck2_A 6 KQTIIVMSDSHGD---SLIVEEVRDRYVGKVDAVFHNGDSELR------P-----------DSPLW--EGIRVVKGNMDF 63 (176)
T ss_dssp CEEEEEECCCTTC---HHHHHHHHHHHTTTSSEEEECSCCCSC------T-----------TCGGG--TTEEECCCTTCC
T ss_pred CcEEEEEecCCCC---HHHHHHHHHHhhcCCCEEEECCCCchH------H-----------HHhhh--CCeEEecCcccc
Confidence 4799999999943 3344444332 79999999997321 0 11122 289999999995
Q ss_pred ccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEE
Q 011680 238 EFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVL 317 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~ 317 (479)
.. .+|. ...+ + -...+|++
T Consensus 64 ~~-----------------~~p~---------~~~~-------------------------------~----~~~~~i~~ 82 (176)
T 3ck2_A 64 YA-----------------GYPE---------RLVT-------------------------------E----LGSTKIIQ 82 (176)
T ss_dssp ST-----------------TCCS---------EEEE-------------------------------E----ETTEEEEE
T ss_pred hh-----------------cCCc---------EEEE-------------------------------E----ECCeEEEE
Confidence 21 1221 0000 0 01257899
Q ss_pred ecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCC
Q 011680 318 MHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGN 397 (479)
Q Consensus 318 ~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~ 397 (479)
+|.|++.... .. +.+.+++.+++++++++||+|...... .+++.++..|+.|.
T Consensus 83 ~Hg~~~~~~~----~~----~~l~~~~~~~~~d~vi~GHtH~~~~~~-------------------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 83 THGHLFDINF----NF----QKLDYWAQEEEAAICLYGHLHVPSAWL-------------------EGKILFLNPGSISQ 135 (176)
T ss_dssp ECSGGGTTTT----CS----HHHHHHHHHTTCSEEECCSSCCEEEEE-------------------ETTEEEEEECCSSS
T ss_pred ECCCccCCCC----CH----HHHHHHHHhcCCCEEEECCcCCCCcEE-------------------ECCEEEEECCCCCc
Confidence 9999875321 11 345667788999999999999765421 13567777887764
Q ss_pred CCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCC
Q 011680 398 QEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGN 444 (479)
Q Consensus 398 ~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~ 444 (479)
+.. ..| ..+|+.+++.+ ..+.+++++ .+|+
T Consensus 136 ~~~-------~~~--------~~~y~il~~~~-~~~~v~~~~-~~~~ 165 (176)
T 3ck2_A 136 PRG-------TIR--------ECLYARVEIDD-SYFKVDFLT-RDHE 165 (176)
T ss_dssp CCT-------TCC--------SCCEEEEEECS-SEEEEEEEC-TTSC
T ss_pred CCC-------CCC--------CCeEEEEEEcC-CEEEEEEEE-ECCE
Confidence 321 111 25899999955 457888876 4676
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.5e-08 Score=101.59 Aligned_cols=244 Identities=13% Similarity=0.147 Sum_probs=126.9
Q ss_pred CCCCeEEEEEecCCCCCC---------hHHHHHH----HHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-
Q 011680 158 PDAPYTFGIIGDLGQTYN---------SLSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA- 223 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~---------~~~~l~~----~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~- 223 (479)
....+||++++|+|.+.. ....+++ +.+.+||+||++||+++.... . ......+.+.++.+.
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~---~-~~~~~~~~~~L~r~~~ 104 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP---S-RKTLHTCLELLRKYCM 104 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSC---C-HHHHHHHHHHHHHHHB
T ss_pred CCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCC---C-HHHHHHHHHHHHHHhc
Confidence 457899999999998743 1223343 344599999999999876541 1 333444555555432
Q ss_pred ---------------------------------hcCCeEEcCCCcccccCCCCCcccccc-----cccccccCCcCCCCC
Q 011680 224 ---------------------------------AYQPWIWSAGNHEIEFMPNMGEVIPFK-----SYLHRIATPYTASKS 265 (479)
Q Consensus 224 ---------------------------------~~~P~~~v~GNHD~~~~~~~~~~~~~~-----~~~~~f~~P~~~~~~ 265 (479)
..+|++++.||||....... ..... .....|.... .
T Consensus 105 ~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~--l~~~~lL~~~glv~~fg~~~----~ 178 (431)
T 3t1i_A 105 GDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADA--LCALDILSCAGFVNHFGRSM----S 178 (431)
T ss_dssp CSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTT--BCHHHHHHHHTSEEECCCCC----C
T ss_pred cCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccc--cCHHHHhccCCcEEEECCcC----c
Confidence 36899999999996421110 00000 0011121000 0
Q ss_pred CCCc---eEEEEcCe--EEEEEeecCCCCCCCHHHHHHHHHHHhh-----ccc---CCCCeEEEEecccccccCCCCCCC
Q 011680 266 TNPL---WYAIRRAS--AHIIVLSSYSPYVKYTPQWWWLREELKK-----VDR---EKTPWLIVLMHVPLYSSNVVHYME 332 (479)
Q Consensus 266 ~~~~---yysf~~g~--v~fi~Lds~~~~~~~~~Q~~WL~~~L~~-----~~~---~~~~w~IV~~H~P~~~~~~~~~~~ 332 (479)
.+.. -..+.-|+ +.+..|.... . +.+.+.+.. ... ....+.|++.|......+...+.
T Consensus 179 ~e~i~~~Pv~l~~g~~~valyGl~~~~-----~---~~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~~~~i- 249 (431)
T 3t1i_A 179 VEKIDISPVLLQKGSTKIALYGLGSIP-----D---ERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFI- 249 (431)
T ss_dssp SSCEEECCEEEEETTEEEEEEEECCCC-----H---HHHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSSSSSC-
T ss_pred ccceeeEEEEEecCCEeEEEEeCCCCC-----H---HHHhhhhccccceeecccccCCCceEEEEECCCccCCCccccC-
Confidence 0110 11233343 5566664211 1 123333322 111 12346899999976322111110
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCC
Q 011680 333 GESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNY 412 (479)
Q Consensus 333 ~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~ 412 (479)
. .-+...++|+|+.||+|..+..... ....++..+-.|+. ++. .+
T Consensus 250 p--------~~l~~~~~Dyv~lGH~H~~~~~~~~---------------~~~~~~~i~yPGS~---~~~--s~------- 294 (431)
T 3t1i_A 250 P--------EQFLDDFIDLVIWGHEHECKIAPTK---------------NEQQLFYISQPGSS---VVT--SL------- 294 (431)
T ss_dssp C--------GGGSCTTCCEEEECSCCSCEEEEEE---------------CTTTCCEEEECCCS---SCC--SC-------
T ss_pred C--------HhHhhCCCCEEEecccccccccccc---------------cCCCCEEEEeCCCC---ccc--Cc-------
Confidence 1 1234567999999999988754311 01234433444433 211 01
Q ss_pred ceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEeC
Q 011680 413 SAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQ 456 (479)
Q Consensus 413 s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~ 456 (479)
+.-....-||..|+|.++ .+.++++.-+.-...+..++.|...
T Consensus 295 ~e~E~~~k~~~lvei~~~-~~~ve~i~l~~~R~f~~~~v~l~~~ 337 (431)
T 3t1i_A 295 SPGEAVKKHVGLLRIKGR-KMNMHKIPLHTVRQFFMEDIVLANH 337 (431)
T ss_dssp CHHHHSCCEEEEEEEETT-EEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred CcccCCCCEEEEEEEECC-EEEEEEEECCCcceEEEEEEEEecc
Confidence 110113459999999664 6788888654455556777777653
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=3e-09 Score=100.97 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=84.7
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccc
Q 011680 161 PYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 238 (479)
..|++++||+|.. ...+..+.+. ++|.++++||++..+. + . .+..+.+..+ .+++.+.||||..
T Consensus 3 ~mri~~isDiHg~---~~~l~~~l~~~~~~d~ii~~GDl~~~g~----~-~---~~~~~~l~~~---~~~~~v~GNhD~~ 68 (246)
T 3rqz_A 3 AMRILIISDVHAN---LVALEAVLSDAGRVDDIWSLGDIVGYGP----R-P---RECVELVRVL---APNISVIGNHDWA 68 (246)
T ss_dssp CCCEEEECCCTTC---HHHHHHHHHHHCSCSEEEECSCCSSSSS----C-H---HHHHHHHHHH---CSSEECCCHHHHH
T ss_pred CcEEEEEeecCCC---HHHHHHHHHhccCCCEEEECCCcCCCCC----C-H---HHHHHHHHhc---CCCEEEeCchHHH
Confidence 4789999999943 3344444443 8999999999997543 1 1 1233333333 2369999999964
Q ss_pred cCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEe
Q 011680 239 FMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~ 318 (479)
...... .. .+. +... ....|. .-....++++||++...... . ..|+++
T Consensus 69 ~~~~~~----~~----~~~-~~~~---~~~~~~----------------~~~l~~~~~~~L~~lp~~~~-~---~~i~~~ 116 (246)
T 3rqz_A 69 CIGRLS----LD----EFN-PVAR---FASYWT----------------TMQLQAEHLQYLESLPNRMI-D---GDWTVV 116 (246)
T ss_dssp HTCCCC----CC------C-GGGG---CHHHHH----------------HHHCCHHHHHHHHHCCSEEE-E---TTEEEE
T ss_pred HhccCC----cc----ccC-HHHH---HHHHHH----------------HHHcCHHHHHHHHhCCcEEE-E---CCEEEE
Confidence 211000 00 000 0000 000000 00124688999986443322 1 147788
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccc
Q 011680 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (479)
Q Consensus 319 H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~y 360 (479)
|.++..... .+... ...+..+|.+++++++|+||+|.-
T Consensus 117 Hg~p~~~~~-~~~~~---~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 117 HGSPRHPIW-EYIYN---ARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp SSCSSSTTT-CCCCS---HHHHHHHGGGCCSSEEECCSSSSE
T ss_pred ECCcCCccc-cccCC---hHHHHHHHhccCCCEEEECCcCcc
Confidence 988765321 11111 245677889999999999999963
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.3e-08 Score=91.71 Aligned_cols=61 Identities=16% Similarity=0.096 Sum_probs=41.4
Q ss_pred CeEEEEEecCCCCCC---hHHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 161 PYTFGIIGDLGQTYN---SLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~---~~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
..|++++||+|...+ ..+.++.+. .++|+|+++||+++. +..+.++.+ ..|++.++||||.
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-------------~~~~~l~~~--~~~v~~V~GNhD~ 85 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-------------DTVILLEKF--SKEFYGVHGNMDY 85 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-------------HHHHHHHHH--TSSEEECCCSSSC
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-------------HHHHHHHhc--CCCEEEEECCCCc
Confidence 479999999994222 223344433 589999999999842 122334333 3699999999995
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.99 E-value=2.6e-08 Score=101.13 Aligned_cols=247 Identities=13% Similarity=0.068 Sum_probs=125.3
Q ss_pred CCCCeEEEEEecCCCCCC---------hHHHHHH----HHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHH---
Q 011680 158 PDAPYTFGIIGDLGQTYN---------SLSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ--- 221 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~---------~~~~l~~----~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~--- 221 (479)
....+||++++|+|.+.. ....+++ +.+.+||+||++||+++.... . ......+.+.++.
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p---~-~~~~~~~~~~lr~~~~ 85 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKP---S-RKALYQALRSLRLNCL 85 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSC---C-HHHHHHHHHHHHHHHB
T ss_pred CCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCC---C-HHHHHHHHHHHHHhcc
Confidence 456899999999998743 2233443 344599999999999876542 1 2222333444433
Q ss_pred ---------H----------------------hhcCCeEEcCCCcccccCCCCCcccccccccccccCCcC----CCC-C
Q 011680 222 ---------S----------------------AAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT----ASK-S 265 (479)
Q Consensus 222 ---------l----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~----~~~-~ 265 (479)
| ...+|++++.||||..... .+......+..|.. +.. .
T Consensus 86 g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~------~~~s~~~lL~~~g~v~l~g~~~~ 159 (417)
T 4fbw_A 86 GDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD------GRYSALDILQVTGLVNYFGRVPE 159 (417)
T ss_dssp SSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----------CCCHHHHHHHTTSCEECCCCC-
T ss_pred cCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccc------ccccHHHHhccCCeEEEeCCccc
Confidence 1 1278999999999964211 11000011101100 000 0
Q ss_pred CCCc---eEEEEcCe--EEEEEeecCCCCCCCHHHH-HHHHHHHhh-ccc---CCCCeEEEEecccccccCCCCCCCCHH
Q 011680 266 TNPL---WYAIRRAS--AHIIVLSSYSPYVKYTPQW-WWLREELKK-VDR---EKTPWLIVLMHVPLYSSNVVHYMEGES 335 (479)
Q Consensus 266 ~~~~---yysf~~g~--v~fi~Lds~~~~~~~~~Q~-~WL~~~L~~-~~~---~~~~w~IV~~H~P~~~~~~~~~~~~~~ 335 (479)
.++. -..+..|+ +.+..+.-.. ++.+ .++.+...+ ... ....+.|++.|..........+. .
T Consensus 160 ~~~i~~~pv~l~~g~~~valyG~~~~~-----d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yi-p-- 231 (417)
T 4fbw_A 160 NDNIVVSPILLQKGFTKLALYGISNVR-----DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYL-P-- 231 (417)
T ss_dssp --CEEECCEEEEETTEEEEEEEECCCC-----HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSSC-C--
T ss_pred CCceeEEeEEEEecCceEEEEeccCCc-----hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCcccC-c--
Confidence 0010 11233333 4455554321 1211 233222211 111 23457899999987543211110 1
Q ss_pred HHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcee
Q 011680 336 MRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAF 415 (479)
Q Consensus 336 ~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~ 415 (479)
.-+...++|+|+.||+|..+.... . ....++..+-.|+..... .+.-
T Consensus 232 ------~~l~~~~~DyvalGH~H~~~~~~~-~--------------~~~~g~~i~~PGS~~~~s------------~~e~ 278 (417)
T 4fbw_A 232 ------ESFIQDFYDFVLWGHEHECLIDGS-Y--------------NPTQKFTVVQPGSTIATS------------LSPG 278 (417)
T ss_dssp ------GGGSCTTCSEEEEESCCSCEEEEE-E--------------ETTTTEEEEECCCSSCSS------------CCHH
T ss_pred ------hhHhhcCCCEEEecCccccceecc-c--------------cCCCCEEEEECCCCCcCC------------Cccc
Confidence 124456899999999998765421 0 012343334444432110 0100
Q ss_pred eeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEeC
Q 011680 416 REASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQ 456 (479)
Q Consensus 416 ~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~ 456 (479)
.....||..|++.++ .+.++++.-+.-.+.+..++.+...
T Consensus 279 E~~~kg~~lvei~~~-~~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 279 ETAPKHCGILNITGK-DFHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp HHSCCEEEEEEEETT-EEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred cCCCCEEEEEEEECC-EEEEEEEECCCcccEEEEEEEeecc
Confidence 013569999999764 4788887654445556777777665
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=3.3e-08 Score=101.19 Aligned_cols=247 Identities=13% Similarity=0.079 Sum_probs=124.6
Q ss_pred CCCCeEEEEEecCCCCCC---------hHHHHH----HHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHH---
Q 011680 158 PDAPYTFGIIGDLGQTYN---------SLSTLK----HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ--- 221 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~---------~~~~l~----~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~--- 221 (479)
....+||++++|+|.+.. ....++ .+.+.+||+||++||+++.... . ......+.+.+..
T Consensus 73 ~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p---s-~~a~~~~~~~Lr~~~~ 148 (472)
T 4fbk_A 73 SENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKP---S-RKALYQALRSLRLNCL 148 (472)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSC---C-HHHHHHHHHHHHHHHB
T ss_pred CCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCC---C-HHHHHHHHHHHHHhcc
Confidence 456899999999998743 122333 3444599999999999976552 1 2222333444443
Q ss_pred ---------H----------------------hhcCCeEEcCCCcccccCCCCCcccccccccccccCCcC----CCC-C
Q 011680 222 ---------S----------------------AAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT----ASK-S 265 (479)
Q Consensus 222 ---------l----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~----~~~-~ 265 (479)
| ...+|++++.||||..... .+......+..|.. +.. .
T Consensus 149 g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~------~~~s~~~LL~~~g~v~l~g~~~~ 222 (472)
T 4fbk_A 149 GDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD------GRYSALDILQVTGLVNYFGRVPE 222 (472)
T ss_dssp SSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--------CCCHHHHHHHTTSCEECCCCSC
T ss_pred cCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCcccc------ccccHHHHhccCCcEEEeCCccc
Confidence 1 1278999999999964211 11000111101100 000 0
Q ss_pred CCCc---eEEEEcCe--EEEEEeecCCCCCCCHHH-HHHHHHHHhh-ccc---CCCCeEEEEecccccccCCCCCCCCHH
Q 011680 266 TNPL---WYAIRRAS--AHIIVLSSYSPYVKYTPQ-WWWLREELKK-VDR---EKTPWLIVLMHVPLYSSNVVHYMEGES 335 (479)
Q Consensus 266 ~~~~---yysf~~g~--v~fi~Lds~~~~~~~~~Q-~~WL~~~L~~-~~~---~~~~w~IV~~H~P~~~~~~~~~~~~~~ 335 (479)
.++. -..+..|+ +.+..+.-. . .+. ..++.+...+ ... ....+.|++.|..........+. .
T Consensus 223 ~d~i~~~pv~l~kg~~~valyGl~y~----~-d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yi-p-- 294 (472)
T 4fbk_A 223 NDNIVVSPILLQKGFTKLALYGISNV----R-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYL-P-- 294 (472)
T ss_dssp SSSEEECCEEEEETTEEEEEEECCCC----C-HHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSSTTSSC-C--
T ss_pred CCceeEEEEEEEeCCceEEEEecCCC----c-hhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCccccC-C--
Confidence 0110 11233343 444444322 1 111 1223222211 111 12346899999887543211110 1
Q ss_pred HHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCcee
Q 011680 336 MRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAF 415 (479)
Q Consensus 336 ~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~ 415 (479)
.-+...++|+|+.||+|..+.... .+ ..++...+-.|+.... .+. .-
T Consensus 295 ------e~ll~~g~DyValGH~H~~~~~~~-~~--------------~~~g~~ivyPGS~~~~-----s~~-------e~ 341 (472)
T 4fbk_A 295 ------ESFIQDFYDFVLWGHEHECLIDGS-YN--------------PTQKFTVVQPGSTIAT-----SLS-------PG 341 (472)
T ss_dssp ------GGGSCTTCSEEEEESCCSCEEEEE-EE--------------TTTTEEEEECCCSSCS-----SCC-------GG
T ss_pred ------hhhhhcCCCEEEecCcccceeeec-cc--------------CCCCeEEEECCCcccc-----ccC-------cc
Confidence 114456899999999998765421 00 1123333333433211 010 00
Q ss_pred eeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEeC
Q 011680 416 REASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQ 456 (479)
Q Consensus 416 ~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~ 456 (479)
.....||..|+|.++ .+.++++.-+.-.+.+..++.+...
T Consensus 342 E~~~kg~~lveI~~~-~v~ve~I~L~t~Rpf~~~~i~L~~~ 381 (472)
T 4fbk_A 342 ETAPKHCGILNITGK-DFHLEKIRLRTVRPFIMKDIILSEV 381 (472)
T ss_dssp GCSCCEEEEEEEETT-EEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred CCCCCEEEEEEEECC-EEEEEEEECCCcccEEEEEEEEecc
Confidence 012469999999664 5788888655445567777777654
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-09 Score=99.45 Aligned_cols=136 Identities=17% Similarity=0.233 Sum_probs=82.4
Q ss_pred eEEEEEecCCCCCChH-------------H-HHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhc
Q 011680 162 YTFGIIGDLGQTYNSL-------------S-TLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY 225 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~-------------~-~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~ 225 (479)
++++++||+|.+.... . .++.+.+. ++|+|+++||+++.+. + +....+.++.+ .
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~----~----~~~~~~~l~~l--~ 71 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFN----D----KNEYLRIWKAL--P 71 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSC----C----TTSHHHHHHHS--S
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCch----h----HHHHHHHHHHC--C
Confidence 5799999999764321 1 12333332 7999999999997531 1 12234444444 3
Q ss_pred CCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhh
Q 011680 226 QPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKK 305 (479)
Q Consensus 226 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~ 305 (479)
.|++.++||||... ..+...| -. +. +..||+ +
T Consensus 72 ~~~~~v~GNhD~~~----------~~~~~~~--------------~~----------l~----------~~~~l~----~ 103 (195)
T 1xm7_A 72 GRKILVMGNHDKDK----------ESLKEYF--------------DE----------IY----------DFYKII----E 103 (195)
T ss_dssp SEEEEECCTTCCCH----------HHHTTTC--------------SE----------EE----------SSEEEE----E
T ss_pred CCEEEEeCCCCCch----------hhhhhhh--------------hc----------hh----------HHHHHH----h
Confidence 58999999999521 0111111 00 00 111221 1
Q ss_pred cccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 306 VDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 306 ~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
. ...+|+++|+|++......+ ....+.+..++.+++++++++||+|....
T Consensus 104 ~----~~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 104 H----KGKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp E----TTEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred c----CCcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 1 23689999999876543222 23357788888999999999999997654
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.96 E-value=3.8e-09 Score=96.29 Aligned_cols=61 Identities=16% Similarity=0.181 Sum_probs=40.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~-~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
+|++++||+|..... .+.++.+.+.++|+|+++||+++. ...+.++.+ ..|+++|+||||.
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-------------~~~~~l~~l--~~~~~~V~GNhD~ 87 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-------------FVIKEFENL--NANIIATYGNNDG 87 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-------------HHHHHGGGC--SSEEEEECCTTCC
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-------------HHHHHHHhc--CCCEEEEeCCCcc
Confidence 899999999943211 123334444589999999999731 122222221 5699999999995
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.92 E-value=6e-09 Score=103.48 Aligned_cols=73 Identities=19% Similarity=0.233 Sum_probs=50.9
Q ss_pred eEEEEEecCCCCCCh----------HHHHHH----HHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cC
Q 011680 162 YTFGIIGDLGQTYNS----------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQ 226 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~----------~~~l~~----~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~ 226 (479)
+||++++|+|.+... ...+++ +.+.+||+||++||+++... + . ...+..+.+.+..+.. .+
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~-~--~-~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSR-P--S-PGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSS-C--C-HHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCC-C--C-HHHHHHHHHHHHHHHHCCC
Confidence 489999999987531 123333 33449999999999987543 1 1 2344556666777653 68
Q ss_pred CeEEcCCCcccc
Q 011680 227 PWIWSAGNHEIE 238 (479)
Q Consensus 227 P~~~v~GNHD~~ 238 (479)
|++.++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999974
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.75 E-value=3.2e-08 Score=104.98 Aligned_cols=175 Identities=16% Similarity=0.104 Sum_probs=92.9
Q ss_pred CCCeEEEEEecCCCCCC--------------h----HHHHHHHHHhCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHH
Q 011680 159 DAPYTFGIIGDLGQTYN--------------S----LSTLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~--------------~----~~~l~~~~~~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~ 219 (479)
...++|++++|+|.... . ...++++.+.+|| ++|.+||++....+. . ........+.+
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~--~-~~~~~~~~~~l 103 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYF--N-QYRGLADRYFM 103 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHH--H-HHTTHHHHHHH
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHH--H-HhCCcHHHHHH
Confidence 45799999999995311 1 2234455555788 889999998653200 0 01112223333
Q ss_pred HHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC-----C-----CCCCceEEEEcCe--EEEEEeecCC
Q 011680 220 EQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS-----K-----STNPLWYAIRRAS--AHIIVLSSYS 287 (479)
Q Consensus 220 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-----~-----~~~~~yysf~~g~--v~fi~Lds~~ 287 (479)
..+ -+-+.++||||+++.. ..+..+.+....|.-.. . .....|..++.++ +-||.+.+..
T Consensus 104 n~l---g~d~~~lGNHEfd~g~-----~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~ 175 (552)
T 2z1a_A 104 HRL---RYRAMALGNHEFDLGP-----GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPD 175 (552)
T ss_dssp HHT---TCCEEECCGGGGTTCH-----HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTT
T ss_pred Hhc---CCCccccccccccCCH-----HHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccc
Confidence 322 3447899999986421 11111111112221110 0 0122466677776 5566665532
Q ss_pred C-----CC------CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEc
Q 011680 288 P-----YV------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAG 355 (479)
Q Consensus 288 ~-----~~------~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsG 355 (479)
. .. ...++.+.+.+.|++ .+...+|+++|.|.... ..+..+ .+||++|+|
T Consensus 176 ~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlgG 237 (552)
T 2z1a_A 176 TREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVGG 237 (552)
T ss_dssp HHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEEC
T ss_pred hhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEeC
Confidence 1 00 011333334444554 45678999999986321 122333 589999999
Q ss_pred cccccee
Q 011680 356 HVHAYER 362 (479)
Q Consensus 356 H~H~yer 362 (479)
|.|...-
T Consensus 238 HtH~~~~ 244 (552)
T 2z1a_A 238 HSHTLLG 244 (552)
T ss_dssp SSCCCBS
T ss_pred CcCcccc
Confidence 9998654
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.73 E-value=2.7e-08 Score=104.79 Aligned_cols=187 Identities=15% Similarity=0.086 Sum_probs=93.6
Q ss_pred CCCeEEEEEecCCCCCCh-----------HHHHHHHHHh----CC-CEEEEcCcccccCCCCCCchhhhHHHHHHHHHHH
Q 011680 159 DAPYTFGIIGDLGQTYNS-----------LSTLKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS 222 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~~-----------~~~l~~~~~~----~p-D~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l 222 (479)
...++|++++|+|..... ...++++.+. ++ +++|.+||++..... .+ ........+.|..+
T Consensus 6 ~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~--~~-~~~~~~~~~~ln~l 82 (516)
T 1hp1_A 6 TYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE--SD-LQDAEPDFRGMNLV 82 (516)
T ss_dssp CEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHH--HH-TTTTHHHHHHHHHH
T ss_pred ceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcch--hh-hcCCcHHHHHHhcc
Confidence 356999999999975321 1234444432 46 799999999753220 00 01122333444443
Q ss_pred hhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC-------C-CCCCceEEEEcCe--EEEEEeecCCC--CC
Q 011680 223 AAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS-------K-STNPLWYAIRRAS--AHIIVLSSYSP--YV 290 (479)
Q Consensus 223 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-------~-~~~~~yysf~~g~--v~fi~Lds~~~--~~ 290 (479)
-+-+.++||||+++.. ..+........+|.-.. + .....|..++.++ +-||.+.+... +.
T Consensus 83 ---g~d~~~~GNHEfd~g~-----~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~ 154 (516)
T 1hp1_A 83 ---GYDAMAIGNHEFDNPL-----TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIG 154 (516)
T ss_dssp ---TCCEEECCGGGGSSCH-----HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSS
T ss_pred ---CCCEEeeccccccCCH-----HHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCccccc
Confidence 2457899999985421 11111111111221110 0 0012355677776 55666655321 11
Q ss_pred -C----C------HHH-HHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccc
Q 011680 291 -K----Y------TPQ-WWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (479)
Q Consensus 291 -~----~------~~Q-~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H 358 (479)
. + .+. .+|++ +|++. .+...+|+++|.|....... ++.......+...+...+||++|+||.|
T Consensus 155 ~p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~--~~~~~~~~~la~~~~~~~iDlilgGHtH 229 (516)
T 1hp1_A 155 NPEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEH--GSNAPGDVEMARALPAGSLAMIVGGHSQ 229 (516)
T ss_dssp SCCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCC--TTSCCCHHHHHHHSCTTSSSEEECCSSC
T ss_pred CcCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCcc--cccCchHHHHHHhCCCCceeEEECCCCC
Confidence 0 0 122 23333 34421 25679999999998543221 1100001223333444569999999999
Q ss_pred cce
Q 011680 359 AYE 361 (479)
Q Consensus 359 ~ye 361 (479)
...
T Consensus 230 ~~~ 232 (516)
T 1hp1_A 230 DPV 232 (516)
T ss_dssp CBC
T ss_pred ccc
Confidence 754
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.63 E-value=6.4e-07 Score=82.62 Aligned_cols=73 Identities=16% Similarity=0.165 Sum_probs=45.4
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhH--HHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 161 PYTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRW--DSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~-~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~--~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
..|++++||+|..... ...++.+.+.++|+|+++||+++.+... .....| .+..+.++.+ ..|++.++||||.
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~--~~~~~~~~~~~~~~l~~~--~~~v~~V~GNHD~ 100 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRN--ALPEGYAPAKVVERLNEV--AHKVIAVRGNCDS 100 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTS--CCCTTBCHHHHHHHHHTT--GGGEEECCCTTCC
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCccc--ccccccCHHHHHHHHHhc--CCceEEEECCCch
Confidence 3799999999965221 1233344445899999999999754310 001111 3334444433 2589999999995
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=4.1e-07 Score=96.90 Aligned_cols=178 Identities=15% Similarity=0.094 Sum_probs=91.9
Q ss_pred CCCCeEEEEEecCCCCCCh------------------H----HHHHHHHHhCCC-EEEEcCcccccCCCCCCchhhhHHH
Q 011680 158 PDAPYTFGIIGDLGQTYNS------------------L----STLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDS 214 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~~------------------~----~~l~~~~~~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~ 214 (479)
....++|++++|+|..... . ..++++.+.+++ ++|.+||++....+. . ......
T Consensus 9 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~--~-~~~g~~ 85 (579)
T 3ztv_A 9 KAVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYF--T-LFGGSA 85 (579)
T ss_dssp CCEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHH--H-TTTTHH
T ss_pred CceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceee--e-ecCCHH
Confidence 3456999999999954211 2 233444445666 899999999753210 0 011222
Q ss_pred HHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC------CC----CCCceEEEEcCe--EEEEE
Q 011680 215 WGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS------KS----TNPLWYAIRRAS--AHIIV 282 (479)
Q Consensus 215 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~------~~----~~~~yysf~~g~--v~fi~ 282 (479)
..+.|..+ -+-+.++||||+++.. ..+..+.....+|.-.. +. .-..|.-++.++ +-||.
T Consensus 86 ~~~~ln~l---g~D~~tlGNHEfd~G~-----~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG 157 (579)
T 3ztv_A 86 DAAVMNAG---NFHYFTLGNHEFDAGN-----EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIG 157 (579)
T ss_dssp HHHHHHHH---TCSEEECCSGGGTTHH-----HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEE
T ss_pred HHHHHHhc---CcCeeeccccccccCH-----HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEE
Confidence 33333333 2446789999985321 11122222222221100 00 012355677777 55666
Q ss_pred eec-C-----CCCCC---CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEE
Q 011680 283 LSS-Y-----SPYVK---YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFI 352 (479)
Q Consensus 283 Lds-~-----~~~~~---~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~Vdlv 352 (479)
+.+ . ..... .....+-+++.+++....+...+|+++|.+... ... +..+ .+||++
T Consensus 158 ~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~~---la~~~~giDlI 222 (579)
T 3ztv_A 158 LDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NIE---IAQKVNDIDVI 222 (579)
T ss_dssp EECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HHH---HHHHCSSCCEE
T ss_pred EEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHH---HHHhCCCCCEE
Confidence 643 1 00011 122234455544443324577899999987521 011 2222 379999
Q ss_pred EEcccccce
Q 011680 353 FAGHVHAYE 361 (479)
Q Consensus 353 lsGH~H~ye 361 (479)
|+||.|...
T Consensus 223 lgGHtH~~~ 231 (579)
T 3ztv_A 223 VTGDSHYLY 231 (579)
T ss_dssp EECSSCCEE
T ss_pred EeCCCCccc
Confidence 999999865
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.6e-07 Score=99.44 Aligned_cols=178 Identities=13% Similarity=0.109 Sum_probs=91.6
Q ss_pred CCCeEEEEEecCCCCCC-----------------hH----HHHHHHHHhCC-CEEEEcCcccccCCCCCCchhhhHHHHH
Q 011680 159 DAPYTFGIIGDLGQTYN-----------------SL----STLKHYMQSGG-QSVLFLGDLSYADRYEYNDVGIRWDSWG 216 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~-----------------~~----~~l~~~~~~~p-D~vl~~GDl~y~~~~~~~~~~~~~~~~~ 216 (479)
...++|++++|+|.... .. ..++++.+.++ +++|.+||++....+. . ........
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~--~-~~~g~~~~ 99 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWF--T-VYKGAEVA 99 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHH--H-HHTTHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhh--h-hhCChHHH
Confidence 45799999999985311 11 23344444566 5999999999754310 0 11112233
Q ss_pred HHHHHHhhcCCeEEcCCCcccccCCCCCcccccc-cccccccCCcCCCC---C---------CCCceEEEEcCeEE--EE
Q 011680 217 RFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFK-SYLHRIATPYTASK---S---------TNPLWYAIRRASAH--II 281 (479)
Q Consensus 217 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~-~~~~~f~~P~~~~~---~---------~~~~yysf~~g~v~--fi 281 (479)
+.|..+ -+-+.++||||+++.. ..+. .+.....+|.-... . ....|.-++.++++ ||
T Consensus 100 ~~ln~l---g~d~~~~GNHEfd~g~-----~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgii 171 (546)
T 4h2g_A 100 HFMNAL---RYDAMALGNHEFDNGV-----EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIV 171 (546)
T ss_dssp HHHHHH---TCSEEECCGGGGTTHH-----HHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEE
T ss_pred HHHHhc---CCcEEeccCcccccCH-----HHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEE
Confidence 333333 2336789999985421 1111 12122222211100 0 01346667778754 55
Q ss_pred EeecCCC--C-CC-----CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEE
Q 011680 282 VLSSYSP--Y-VK-----YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIF 353 (479)
Q Consensus 282 ~Lds~~~--~-~~-----~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~Vdlvl 353 (479)
.+.+... + .. .....+.+++.+++....++..+|+++|.+.... ..+...+ .+||++|
T Consensus 172 G~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~d------------~~la~~~--~giDlIl 237 (546)
T 4h2g_A 172 GYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMD------------KLIAQKV--RGVDVVV 237 (546)
T ss_dssp EEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHHH------------HHHHHHS--TTCCEEE
T ss_pred EecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccch------------HHHHHhC--CCCcEEE
Confidence 5554210 0 00 1122344444444432245788999999986310 1121111 4799999
Q ss_pred Ecccccce
Q 011680 354 AGHVHAYE 361 (479)
Q Consensus 354 sGH~H~ye 361 (479)
+||.|...
T Consensus 238 gGHtH~~~ 245 (546)
T 4h2g_A 238 GGHSNTFL 245 (546)
T ss_dssp CCSSCCCC
T ss_pred eCCcCccc
Confidence 99999754
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.52 E-value=8.6e-07 Score=93.44 Aligned_cols=189 Identities=16% Similarity=0.143 Sum_probs=92.1
Q ss_pred CCCeEEEEEecCCCCCC-------------hH----HHHHHHHHhCCC-EEEEcCcccccCCCCCCchhhh----HHHHH
Q 011680 159 DAPYTFGIIGDLGQTYN-------------SL----STLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIR----WDSWG 216 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~-------------~~----~~l~~~~~~~pD-~vl~~GDl~y~~~~~~~~~~~~----~~~~~ 216 (479)
...++|++++|+|.... .. ..++++.+.+++ ++|.+||++..... ..+... .....
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~--~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPF--CNYLIAHSGSSQPLV 94 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHH--HHHHHHTTCSSHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHH--HHHHhhcccCcchHH
Confidence 45799999999985421 11 233444444666 77889999864320 000000 12223
Q ss_pred HHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC-----C--CCCCceEEEEcCe--EEEEEeecCC
Q 011680 217 RFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS-----K--STNPLWYAIRRAS--AHIIVLSSYS 287 (479)
Q Consensus 217 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-----~--~~~~~yysf~~g~--v~fi~Lds~~ 287 (479)
+.|..+ -+-+.++||||+++.. ..+..+.....+|.-.. + .....|.-++.++ +-||.+.+..
T Consensus 95 ~~ln~l---g~D~~t~GNHefd~G~-----~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~ 166 (527)
T 3qfk_A 95 DFYNRM---AFDFGTLGNHEFNYGL-----PYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQF 166 (527)
T ss_dssp HHHHHT---CCCEECCCGGGGTTCH-----HHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTT
T ss_pred HHHHhc---CCcEEeccccccccCH-----HHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCC
Confidence 333332 2346789999985431 11111211112221110 0 0012366677787 4556665532
Q ss_pred C--CCC--------CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCC------CCCCHHHHHHHHHHHHHcCCcE
Q 011680 288 P--YVK--------YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVH------YMEGESMRAVFESWFVHSRVDF 351 (479)
Q Consensus 288 ~--~~~--------~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~------~~~~~~~r~~l~~l~~~~~Vdl 351 (479)
. +.. .....+.+++.+++.. .++..+|+++|.+.-...... .+++. ...+..-+ ..+||+
T Consensus 167 ~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~--~~~la~~~-~~giDl 242 (527)
T 3qfk_A 167 IPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE--GYAMLEAF-SKDIDI 242 (527)
T ss_dssp GGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC--HHHHHHHH-GGGCSE
T ss_pred cccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH--HHHHHHhc-CCCCcE
Confidence 1 111 1123344555444433 356789999998764321100 11111 11222112 257999
Q ss_pred EEEcccccce
Q 011680 352 IFAGHVHAYE 361 (479)
Q Consensus 352 vlsGH~H~ye 361 (479)
+|+||.|...
T Consensus 243 IlgGHtH~~~ 252 (527)
T 3qfk_A 243 FITGHQHRQI 252 (527)
T ss_dssp EECCSSCCEE
T ss_pred EEECCCCccc
Confidence 9999999755
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.4e-06 Score=91.42 Aligned_cols=186 Identities=14% Similarity=0.083 Sum_probs=90.8
Q ss_pred CCeEEEEEecCCCCCC---------------hH----HHHHHHHHhCCCEEEE-cCcccccCCCCCCchhhhHHHHHHHH
Q 011680 160 APYTFGIIGDLGQTYN---------------SL----STLKHYMQSGGQSVLF-LGDLSYADRYEYNDVGIRWDSWGRFI 219 (479)
Q Consensus 160 ~~~~f~~~gD~~~~~~---------------~~----~~l~~~~~~~pD~vl~-~GDl~y~~~~~~~~~~~~~~~~~~~~ 219 (479)
..++|++++|+|.... .. ..++++.+.+++.+++ +||++.... ..........+
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~------~~~~~~g~~~~ 78 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPY------ISSLTKGKAII 78 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSH------HHHTTTTHHHH
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCch------hhhhcCChHHH
Confidence 4689999999985311 12 2344455558887776 999986421 11111111223
Q ss_pred HHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCC-------CCCC--CCceEEEEcCe--EEEEEeecCC-
Q 011680 220 EQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA-------SKST--NPLWYAIRRAS--AHIIVLSSYS- 287 (479)
Q Consensus 220 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~-------~~~~--~~~yysf~~g~--v~fi~Lds~~- 287 (479)
+.+..--+-++++||||+++.. ..+..+.....+|.-. .+.. ...|.-++.++ +-||.+-+..
T Consensus 79 ~~ln~lg~D~~tlGNHEfd~G~-----~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~ 153 (509)
T 3ive_A 79 DIMNTMPFDAVTIGNHEFDHGW-----DNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFA 153 (509)
T ss_dssp HHHTTSCCSEECCCGGGGTTCH-----HHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHH
T ss_pred HHHHhcCCcEEeecccccccCH-----HHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcc
Confidence 3333333557789999985431 1111111111122110 0000 13355677777 4556663310
Q ss_pred ----CC---CC---CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCC----CCHHHHHHHHHHHHH-cCCcEE
Q 011680 288 ----PY---VK---YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYM----EGESMRAVFESWFVH-SRVDFI 352 (479)
Q Consensus 288 ----~~---~~---~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~----~~~~~r~~l~~l~~~-~~Vdlv 352 (479)
.+ .. .....+.+++.+++.... +..+|+++|.+.-........ ....... .+.++ .+||++
T Consensus 154 ~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~---~la~~~~giDlI 229 (509)
T 3ive_A 154 FNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKDI---QTASQVKGLDIL 229 (509)
T ss_dssp HHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHHH---HHHHHCSSCCEE
T ss_pred cccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccccccccccccchHH---HHHhcCCCCcEE
Confidence 00 01 122344455555444323 778999999985321111000 0011111 22333 369999
Q ss_pred EEcccccc
Q 011680 353 FAGHVHAY 360 (479)
Q Consensus 353 lsGH~H~y 360 (479)
|+||.|..
T Consensus 230 lgGHtH~~ 237 (509)
T 3ive_A 230 ITGHAHVG 237 (509)
T ss_dssp EEESSCCC
T ss_pred EeCCcCcc
Confidence 99999963
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.43 E-value=1.6e-06 Score=91.99 Aligned_cols=144 Identities=14% Similarity=0.075 Sum_probs=73.9
Q ss_pred CC-EEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC---
Q 011680 188 GQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS--- 263 (479)
Q Consensus 188 pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~--- 263 (479)
|| ++|.+||++..... .. ........+.+..+ ..+.+ + ||||+++.. ..+..+...+..|.-..
T Consensus 123 pd~Lll~~GD~~~gs~~--~~-~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~-----~~l~~~l~~~~~p~L~aNv~ 190 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGL--SL-LTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGR-----ERVEELLGLFRGEFLSYNIV 190 (562)
T ss_dssp CCEEEEECSCCSSSSHH--HH-HHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCH-----HHHHHHHHHCCSEECCSSCE
T ss_pred CCEEEEeCCCCCCcchh--hh-hhCCHHHHHHHHhh--CCcEE-e-cchhcccCH-----HHHHHHHHhCCCCEEEEEEE
Confidence 88 99999999965320 00 01122333444444 45665 7 999985421 11222222222221110
Q ss_pred ----C-CCCCceEEEEcCe--EEEEEeecCC-----------C--CCCCHHHHHHHHHHHhhcccCCCCeEEEEeccccc
Q 011680 264 ----K-STNPLWYAIRRAS--AHIIVLSSYS-----------P--YVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLY 323 (479)
Q Consensus 264 ----~-~~~~~yysf~~g~--v~fi~Lds~~-----------~--~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~ 323 (479)
+ .....|.-++.++ +-||.+.+.. . +....+..+-+.+.|++ .+...+|+++|.|..
T Consensus 191 ~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~~ 267 (562)
T 2wdc_A 191 DDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGMQ 267 (562)
T ss_dssp ETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCHH
T ss_pred ecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCCc
Confidence 0 0012355667776 5556665421 0 11122333323333443 457789999999863
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 324 SSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 324 ~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
.. ..+..+ .+||++|+||.|...
T Consensus 268 ~d---------------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 268 LD---------------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp HH---------------HHHHTTSSSCCEEEECSSCCCC
T ss_pred ch---------------HHHHhcCCCCcEEEeCCCCCCC
Confidence 10 123333 489999999999754
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.16 E-value=3.6e-05 Score=73.72 Aligned_cols=174 Identities=16% Similarity=0.077 Sum_probs=91.7
Q ss_pred CeEEEEEecCCCCCCh---HHHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcc
Q 011680 161 PYTFGIIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHE 236 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~---~~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 236 (479)
.+||+++||.+..... ...+.++.+. ++|+++..||.+..+. . - .....+.+..+ .+- ..+.||||
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~----g-~--~~~~~~~ln~~--G~D-a~TlGNHe 73 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGK----G-L--SLKHYEFLKEA--GVN-YITMGNHT 73 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTS----S-C--CHHHHHHHHHH--TCC-EEECCTTT
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC----C-c--CHHHHHHHHhc--CCC-EEEEccCc
Confidence 5899999999633211 1234555554 7899999999987653 1 1 11222333322 233 45789999
Q ss_pred cccCCCCCcccccc-c--ccccccCCcCCCCC-CCCceEEEEcCe--EEEEEeecCCCCC--CCHHHHHHHHHHHhhccc
Q 011680 237 IEFMPNMGEVIPFK-S--YLHRIATPYTASKS-TNPLWYAIRRAS--AHIIVLSSYSPYV--KYTPQWWWLREELKKVDR 308 (479)
Q Consensus 237 ~~~~~~~~~~~~~~-~--~~~~f~~P~~~~~~-~~~~yysf~~g~--v~fi~Lds~~~~~--~~~~Q~~WL~~~L~~~~~ 308 (479)
+++.++ ...|- . ...--++|...... .+..|.-++.++ +-+|.|-+...+. ..+.-.+-+++.+++
T Consensus 74 fD~g~~---~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~~--- 147 (281)
T 1t71_A 74 WFQKLD---LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK--- 147 (281)
T ss_dssp TCCGGG---HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT---
T ss_pred ccCCcc---HHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHhh---
Confidence 865311 00010 0 00001122211000 233566788877 4556555543122 222334456666662
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
.+++.+||.+|.-. ......+.. ...-+||+++.||+|...-
T Consensus 148 ~~~diIIv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t~ 189 (281)
T 1t71_A 148 RDCDLHIVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPSA 189 (281)
T ss_dssp CCCSEEEEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCCT
T ss_pred cCCCEEEEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 56789999999521 111122222 2234699999999997553
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.14 E-value=3.6e-05 Score=76.30 Aligned_cols=49 Identities=20% Similarity=0.180 Sum_probs=29.0
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
.++..+|+++|...-........++. ...|..-+ .+||++|.||.|...
T Consensus 206 ~g~D~II~l~H~G~~~d~~~~~~e~~--~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGIEKQAQSSGAENA--VFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCCCSSCCCTTCSSC--HHHHHHHC--SCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCccccccccccchh--HHHHHhcC--CCCcEEEECCCCccC
Confidence 46889999999987432211111221 11222112 479999999999753
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.11 E-value=2.9e-05 Score=82.06 Aligned_cols=194 Identities=14% Similarity=0.142 Sum_probs=92.6
Q ss_pred EECCCCCC-CCCCeEEEEEecCCCCCC--------------hHHHHHHHHH----hCCC-EEEEcCcccccCCCCCCchh
Q 011680 150 FQTPPKIH-PDAPYTFGIIGDLGQTYN--------------SLSTLKHYMQ----SGGQ-SVLFLGDLSYADRYEYNDVG 209 (479)
Q Consensus 150 F~T~p~~~-~~~~~~f~~~gD~~~~~~--------------~~~~l~~~~~----~~pD-~vl~~GDl~y~~~~~~~~~~ 209 (479)
+-++|... ....++|++++|+|.... .......+.+ .+++ ++|.+||++....+.... .
T Consensus 3 ~~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~-~ 81 (557)
T 3c9f_A 3 LASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDIT-S 81 (557)
T ss_dssp --CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSS-S
T ss_pred cccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhc-c
Confidence 34445432 346799999999987421 1122222322 3778 579999999643210000 0
Q ss_pred hhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCC--------C---CCCceEEEEc--C
Q 011680 210 IRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASK--------S---TNPLWYAIRR--A 276 (479)
Q Consensus 210 ~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~--------~---~~~~yysf~~--g 276 (479)
.......+.|..+ -.=+.++||||+++.... ...+........+|.-... . ....|.-++. +
T Consensus 82 ~~g~~~~~~ln~l---g~Da~tlGNHEfD~G~~~--l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~ 156 (557)
T 3c9f_A 82 PNGLKSTPIFIKQ---DYDLLTIGNHELYLWENS--KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIR 156 (557)
T ss_dssp STTTTTHHHHTTS---CCSEECCCGGGSSSHHHH--HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTT
T ss_pred cCCHHHHHHHHhc---CCCEEeecchhcccchHH--HHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccC
Confidence 0111222223222 234678999998642100 0011111112222221110 0 1123556777 7
Q ss_pred eE--EEEEeecCCCCC------CCHHH---HHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHH
Q 011680 277 SA--HIIVLSSYSPYV------KYTPQ---WWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFV 345 (479)
Q Consensus 277 ~v--~fi~Lds~~~~~------~~~~Q---~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~ 345 (479)
++ -||.+.+...-. ....+ .+|+++.++ .++..+|+++|.+.-... .+ . ......+.
T Consensus 157 G~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~------d~-~-~~~~~~lA 224 (557)
T 3c9f_A 157 GIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW------GE-F-YQVHQYLR 224 (557)
T ss_dssp CCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT------CH-H-HHHHHHHH
T ss_pred CEEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC------cc-c-cHHHHHHH
Confidence 64 455554432100 01112 146665443 467899999999873101 11 1 11222222
Q ss_pred H--cCCcE-EEEcccccce
Q 011680 346 H--SRVDF-IFAGHVHAYE 361 (479)
Q Consensus 346 ~--~~Vdl-vlsGH~H~ye 361 (479)
+ .++|+ +|+||.|...
T Consensus 225 ~~~~giDilIlgGHtH~~~ 243 (557)
T 3c9f_A 225 QFFPDTIIQYFGGHSHIRD 243 (557)
T ss_dssp HHCTTSEEEEEECSSCCEE
T ss_pred HhCCCCCEEEECCCCCCCC
Confidence 2 58995 9999999874
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.04 E-value=0.00016 Score=68.24 Aligned_cols=170 Identities=14% Similarity=0.059 Sum_probs=87.8
Q ss_pred eEEEEEecCCCCCChHH----HHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNSLS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~----~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||.= +..... .+.++.+.. |++|..|+.+..+... . ....+.|..+ .+- ..+.||||+
T Consensus 1 m~ilf~GDv~-g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~----~---~~~~~~l~~~--G~D-a~TlGNHef 68 (255)
T 1t70_A 1 MRVLFIGDVF-GQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGM----H---RDAARGALEA--GAG-CLTLGNHAW 68 (255)
T ss_dssp CEEEEECCBB-HHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSC----C---HHHHHHHHHH--TCS-EEECCTTTT
T ss_pred CEEEEEeccC-ChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCC----C---HHHHHHHHhC--CCC-EEEeccccc
Confidence 4799999983 211122 234444446 9999999988765310 1 1122333322 333 357799998
Q ss_pred ccCCCCCcccccccccc-cccCCcCCC--CCCCCceEEEEcCe--EEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCC
Q 011680 238 EFMPNMGEVIPFKSYLH-RIATPYTAS--KSTNPLWYAIRRAS--AHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTP 312 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~-~f~~P~~~~--~~~~~~yysf~~g~--v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 312 (479)
+.. . ...+-.-.. +.-.|.+-+ +..+..|.-++.++ +-+|.|-+.........-.+-+++.+++. +.+
T Consensus 69 D~~-~---l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d 141 (255)
T 1t70_A 69 HHK-D---IYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLG 141 (255)
T ss_dssp SST-T---HHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCC
T ss_pred cCc-h---HHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCC
Confidence 642 1 111100011 111122211 11234566788877 45555555432212333345566777665 567
Q ss_pred eEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 313 w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
.+||.+|.-. ....+.+.. ...-+||+++.||+|...-
T Consensus 142 ~IIv~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~~~ 179 (255)
T 1t70_A 142 TVFVDFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVPTA 179 (255)
T ss_dssp EEEEEEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSCBS
T ss_pred EEEEEeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCC
Confidence 8999999521 111122222 2234699999999997554
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.03 E-value=0.00017 Score=67.93 Aligned_cols=168 Identities=13% Similarity=0.152 Sum_probs=87.8
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccc
Q 011680 162 YTFGIIGDLGQTYNS---LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~---~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 238 (479)
.|++++||.=..... ...+.++.+.. |++|.-|..+..+.. +. ....+.+..+ .+-.+ +.||||++
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g----~~---~~~~~~l~~~--G~D~~-T~GNHefD 69 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKG----LD---RRSYRLLREA--GVDLV-SLGNHAWD 69 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSS----CC---HHHHHHHHHH--TCCEE-ECCTTTTS
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCC----cC---HHHHHHHHhC--CCCEE-EeccEeeE
Confidence 479999998221111 22334444446 999888887765431 11 1222333322 44444 78999986
Q ss_pred cCCCCCccccccccccc--ccCCcCCC-CCCCCceEEEEcCeEEEEEee--cCCCCCCCHHHHHHHHHHHhhcccCCCCe
Q 011680 239 FMPNMGEVIPFKSYLHR--IATPYTAS-KSTNPLWYAIRRASAHIIVLS--SYSPYVKYTPQWWWLREELKKVDREKTPW 313 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~--f~~P~~~~-~~~~~~yysf~~g~v~fi~Ld--s~~~~~~~~~Q~~WL~~~L~~~~~~~~~w 313 (479)
.. ....|... .-.|.+-+ +.....|.-++.++.++-+++ +.........-.+-+++.+++.. .+.
T Consensus 70 ~~-------~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~ 139 (252)
T 2z06_A 70 HK-------EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADY 139 (252)
T ss_dssp CT-------THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSE
T ss_pred Cc-------hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCE
Confidence 42 11112111 11122211 112345777888876654444 33221122333445666676652 788
Q ss_pred EEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 314 ~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
+||.+|.-.- .....+. .+..-+||+|+.||+|....
T Consensus 140 IIv~~H~g~t-----------sek~~la-~~~dg~Vd~VvGgHTHv~t~ 176 (252)
T 2z06_A 140 VLVEVHAEAT-----------SEKMALA-HYLDGRASAVLGTHTHVPTL 176 (252)
T ss_dssp EEEEEECSCH-----------HHHHHHH-HHHBTTBSEEEEESSCSCBS
T ss_pred EEEEeCCCcH-----------HHHHHHH-HhCCCCeEEEEcCCCCcCCC
Confidence 9999996421 1112222 22334699999999997543
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00054 Score=67.70 Aligned_cols=47 Identities=23% Similarity=0.304 Sum_probs=28.3
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
.++.-+|+++|...-........++... ++.+ .++|++|.||.|...
T Consensus 200 ~g~D~II~l~H~G~~~d~~~~~~en~~~------~~~~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 200 KGADVVVVVAHSGLSADPYQAMAENSVY------YLSQVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp TTCSEEEEEECCCCCCSCCCTTCSCCHH------HHTTSTTCCEEEECSSCSEE
T ss_pred cCCCEEEEEeccCccccccccccchhHH------HHhhCCCCCEEEeCCCcccc
Confidence 4688999999998732111101122111 1222 479999999999754
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00026 Score=74.46 Aligned_cols=173 Identities=13% Similarity=0.068 Sum_probs=86.3
Q ss_pred CeEEEEEecCCCCC------------------Ch---HHHHHHHHHhCCC-EEEEcCcccccCCCCCCchhhhHHHHHHH
Q 011680 161 PYTFGIIGDLGQTY------------------NS---LSTLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRF 218 (479)
Q Consensus 161 ~~~f~~~gD~~~~~------------------~~---~~~l~~~~~~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~ 218 (479)
.++|+.+.|+|..- .. ...++++.+.+++ ++|.+||++....+ .. ..+.....+.
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~--~~-~~~g~~~i~~ 79 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW--FT-VYKGAEVAHF 79 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH--HH-HHTTHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHH--HH-HhCChHHHHH
Confidence 47899999998421 11 1233444445665 67789999965321 00 1111112222
Q ss_pred HHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC------------CCCCCceEEEEcCeEE--EEEee
Q 011680 219 IEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS------------KSTNPLWYAIRRASAH--IIVLS 284 (479)
Q Consensus 219 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~------------~~~~~~yysf~~g~v~--fi~Ld 284 (479)
|..+ -.=..++||||+++... .-...+.....+|.-.. ...-..|.-++.++++ ||.+-
T Consensus 80 mN~l---gyDa~~lGNHEFd~G~~----~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGlt 152 (530)
T 4h1s_A 80 MNAL---RYDAMALGNHEFDNGVE----GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYT 152 (530)
T ss_dssp HHHT---TCCEEECCGGGGTTTTH----HHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEE
T ss_pred Hhcc---CCCEEEEchhhhccCHH----HHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeecccc
Confidence 2222 22367999999865421 00011111122221111 0011236667888754 55555
Q ss_pred cCCC-----CC------CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEE
Q 011680 285 SYSP-----YV------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFI 352 (479)
Q Consensus 285 s~~~-----~~------~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~Vdlv 352 (479)
+... .. ..-+..+...++|++ .++.-+|+++|..+-. -. .+.++ .+||++
T Consensus 153 t~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~~------------d~---~la~~v~giD~I 214 (530)
T 4h1s_A 153 SKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFEM------------DK---LIAQKVRGVDVV 214 (530)
T ss_dssp CTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH------------HH---HHHHHSTTCCEE
T ss_pred ccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCchH------------HH---HHHhcCCCCCee
Confidence 4320 01 112223333444554 4678899999975411 01 12333 379999
Q ss_pred EEcccccce
Q 011680 353 FAGHVHAYE 361 (479)
Q Consensus 353 lsGH~H~ye 361 (479)
+.||.|.+-
T Consensus 215 lgGHsH~~~ 223 (530)
T 4h1s_A 215 VGGHSNTFL 223 (530)
T ss_dssp ECCSSCCCB
T ss_pred ccCCcccee
Confidence 999999754
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00098 Score=54.04 Aligned_cols=92 Identities=26% Similarity=0.351 Sum_probs=58.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..|.+.......+++.|+|....... .-.|+|....+...... ..... ......++|++|+|+|.
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~------~~~~~~~~i~~L~p~t~ 81 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDW--IMETI------SGDRLTHQIMDLNLDTM 81 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTS--EEEEE------ETTCCEEEECSCCSSCE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccce--EEEEE------CCCceEEEEcCCCCCCE
Confidence 47888888866434579999999875332 34677766432211000 00010 12234578999999999
Q ss_pred EEEEeCC------CCccceEEEECCCCCCC
Q 011680 135 YYYKIGD------GDSSREFWFQTPPKIHP 158 (479)
Q Consensus 135 Y~Y~v~~------g~~~~~~~F~T~p~~~~ 158 (479)
|.+||.. |..+....|+|++.+.+
T Consensus 82 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 82 YYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp EEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 9999864 34466788999886544
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0017 Score=52.19 Aligned_cols=83 Identities=17% Similarity=0.248 Sum_probs=53.3
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCc----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..|.+.......+++.|+|........ -.|+|....+..+..... . ...++|++|+|+|.
T Consensus 9 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~--~~~~~l~~L~p~t~ 75 (108)
T 2dm4_A 9 DAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRA-----------A--SNFTEIKNLLVNTL 75 (108)
T ss_dssp TSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEEE-----------S--SSEEEECSCCSSCE
T ss_pred cCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEecC-----------C--ccEEEeCCCCCCCE
Confidence 378888777543334799999998753322 356666655432222111 1 12678999999999
Q ss_pred EEEEeCC----C--CccceEEEECCC
Q 011680 135 YYYKIGD----G--DSSREFWFQTPP 154 (479)
Q Consensus 135 Y~Y~v~~----g--~~~~~~~F~T~p 154 (479)
|.+||.. | ..+....++|.+
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 76 YTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEEECCCceeCCCCCEEEECCC
Confidence 9999874 3 345577888854
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.002 Score=53.52 Aligned_cols=83 Identities=16% Similarity=0.044 Sum_probs=54.7
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC--------ccEEEEEecCCCC--cceEEeeEEEEeeeccccceEEEEEec
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG--------SNRVQYGKLEKKY--DSSAEGTVTNYTFYKYKSGYIHHCLVD 127 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~--------~~~V~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~h~v~l~ 127 (479)
+.+|..|++..-. .+++.|+|....... .-.|+|....... ...+.. ....++|+
T Consensus 19 p~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~-------------~~~~~~v~ 83 (123)
T 2edd_A 19 MLPPVGVQAVALT--HDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT-------------TSLSYTAT 83 (123)
T ss_dssp SCCCEEEEEEEEE--TTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE-------------SSSEEEEE
T ss_pred CCCCcceEEEEcC--CCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeC-------------CceEEEec
Confidence 3578888887544 369999999654222 4467887753211 111111 13357899
Q ss_pred CCCCCcEEEEEeCC------CCccceEEEECCCC
Q 011680 128 DLEYDTKYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 128 gL~p~t~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
||+|+|.|.++|.. |..+....|+|.+.
T Consensus 84 gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 84 GLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 99999999999863 34466788999875
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0022 Score=51.65 Aligned_cols=86 Identities=17% Similarity=0.304 Sum_probs=53.9
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..+.+... ..+++.|.|....... .-.|+|........... .. ..-...++|++|+|+|.|
T Consensus 13 ~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y 79 (111)
T 1x5l_A 13 QVVVIRQERA--GQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYS-----TL------KAVTTRATVSGLKPGTRY 79 (111)
T ss_dssp CCCCEECSCB--CSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCE-----EE------EESSSEEEECSCCTTCEE
T ss_pred CCceEEEEEc--CCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEE-----Ee------cCCCCEEEEcCCCCCCEE
Confidence 5666665543 3469999998765322 34677766542111111 00 011235689999999999
Q ss_pred EEEeCC------CCccceEEEECCCCCCC
Q 011680 136 YYKIGD------GDSSREFWFQTPPKIHP 158 (479)
Q Consensus 136 ~Y~v~~------g~~~~~~~F~T~p~~~~ 158 (479)
.+||.. |..+....|+|++.+++
T Consensus 80 ~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 80 VFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 999864 44566889999987544
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0016 Score=52.37 Aligned_cols=81 Identities=21% Similarity=0.311 Sum_probs=49.4
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..+.++... .+++.|+|......+ .-.|+|....+.......+ ....++|++|+|+|.|
T Consensus 10 ~P~~~~~~~~s--~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~v~~L~p~t~Y 74 (106)
T 1x4x_A 10 QCKPPQVTCRS--ATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-------------PGLSYEIKGLSPATTY 74 (106)
T ss_dssp CCCCCCCEEEE--TTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-------------SCSEEEEESCCSSCEE
T ss_pred CCCCCEEEEcC--CCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-------------CcceEEEcCCCCCCEE
Confidence 45555555333 369999998765322 2356665543221111111 1125688999999999
Q ss_pred EEEeCC------CCccceEEEECCCC
Q 011680 136 YYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 136 ~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
.+||.. |..+....++|++.
T Consensus 75 ~frV~A~n~~G~g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 75 YCRVQALSVVGAGPFSEVVACVTPPS 100 (106)
T ss_dssp EEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEEEEcCCcCCCCcCCEEEECCCC
Confidence 999864 34456788999875
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0009 Score=63.62 Aligned_cols=61 Identities=21% Similarity=0.332 Sum_probs=40.5
Q ss_pred eEEEEEecCCCCCChHHHHHHHHHh----CC-CEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcc
Q 011680 162 YTFGIIGDLGQTYNSLSTLKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHE 236 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l~~~~~~----~p-D~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 236 (479)
.+++++||+|.. ...+.++.+. ++ |.+|++||+++.+. + .. +..+.+.. .+++.+.||||
T Consensus 19 ~~i~visDiHg~---~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~----~-~~---~~l~~l~~----~~~~~v~GNHd 83 (262)
T 2qjc_A 19 GRVIIVGDIHGC---RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGP----D-SF---GVVRLLKR----LGAYSVLGNHD 83 (262)
T ss_dssp SCEEEECCCTTC---HHHHHHHHHHHTCCTTTSEEEECSCCSSSSS----C-HH---HHHHHHHH----HTCEECCCHHH
T ss_pred CeEEEEeCCCCC---HHHHHHHHHHHhccCCCCEEEEecCCCCCCC----C-HH---HHHHHHHH----CCCEEEeCcCh
Confidence 489999999943 3444444432 44 99999999997644 1 11 12223322 48999999999
Q ss_pred c
Q 011680 237 I 237 (479)
Q Consensus 237 ~ 237 (479)
.
T Consensus 84 ~ 84 (262)
T 2qjc_A 84 A 84 (262)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0069 Score=49.13 Aligned_cols=89 Identities=13% Similarity=0.154 Sum_probs=53.8
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC------CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE------LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~------~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..|.+.... .+++.|+|..... ...-.|+|............ .... .+-...++|++|+|+
T Consensus 10 ~~P~~~~~~~~~--~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~--~~~~------~~~~~~~~i~~L~p~ 79 (114)
T 1x4y_A 10 AGPYITFTDAVN--ETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYK--KDMV------EGDRYWHSISHLQPE 79 (114)
T ss_dssp SCCEEEEEECSS--SSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCC--CEEE------ETTCCEEEECSCCTT
T ss_pred CCCeEEEEEecC--CCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCccee--eEec------CCcEeEEEcCCCCCC
Confidence 367777766443 3699999998741 12246677654432100000 0000 011235789999999
Q ss_pred cEEEEEeCC------CCccceEEEECCCCCC
Q 011680 133 TKYYYKIGD------GDSSREFWFQTPPKIH 157 (479)
Q Consensus 133 t~Y~Y~v~~------g~~~~~~~F~T~p~~~ 157 (479)
|.|.++|.. |..+....++|.+.+.
T Consensus 80 t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 80 TSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp CEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred CEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 999999864 4456678899987643
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00079 Score=62.12 Aligned_cols=62 Identities=19% Similarity=0.260 Sum_probs=41.3
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCc
Q 011680 161 PYTFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 235 (479)
..+++++||+|.. ...+.++.+. ++|.+|++||+++.+. . . . +.++.+ ...+++.+.|||
T Consensus 12 ~~~i~visDiHg~---~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~----~-~---~---~~~~~l-~~~~~~~v~GNh 76 (221)
T 1g5b_A 12 YRNIWVVGDLHGC---YTNLMNKLDTIGFDNKKDLLISVGDLVDRGA----E-N---V---ECLELI-TFPWFRAVRGNH 76 (221)
T ss_dssp CSCEEEECCCTTC---HHHHHHHHHHHTCCTTTCEEEECSCCSSSSS----C-H---H---HHHGGG-GSTTEEECCCHH
T ss_pred CceEEEEEcCCCC---HHHHHHHHHHccCCCCCCEEEEeCCccCCCC----C-h---H---HHHHHH-hcCCEEEEccCc
Confidence 4689999999954 3334433332 6899999999997654 1 1 1 122222 235899999999
Q ss_pred cc
Q 011680 236 EI 237 (479)
Q Consensus 236 D~ 237 (479)
|.
T Consensus 77 d~ 78 (221)
T 1g5b_A 77 EQ 78 (221)
T ss_dssp HH
T ss_pred HH
Confidence 96
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0011 Score=52.51 Aligned_cols=81 Identities=21% Similarity=0.235 Sum_probs=48.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCC--CC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPN--EL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~--~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..+.+.... .+++.|+|.... .. ..-.|+|............+ -...+.|+||+|+
T Consensus 10 ~~P~~l~~~~~~--~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~ 74 (103)
T 2edy_A 10 GFPQNLHVTGLT--TSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKPD 74 (103)
T ss_dssp CCCEEEECSSBC--SSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCTT
T ss_pred CCCeeeEEEecC--CCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCCC
Confidence 367667665433 469999999872 11 22366676654422111111 1224588999999
Q ss_pred cEEEEEeCC----C--CccceEEEECCC
Q 011680 133 TKYYYKIGD----G--DSSREFWFQTPP 154 (479)
Q Consensus 133 t~Y~Y~v~~----g--~~~~~~~F~T~p 154 (479)
|.|.++|.. | ..+....|+|.|
T Consensus 75 t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 75 TTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred CEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 999999874 3 334455667765
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0062 Score=49.66 Aligned_cols=85 Identities=20% Similarity=0.284 Sum_probs=54.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCC-CC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPN-EL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~-~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.+.... .+++.|+|.... .. ..-.|+|........... .. ...-...++|++|+|+|
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~-------~~---~~~~~~~~~i~~L~p~t 86 (120)
T 1x5f_A 19 SAPRDVVASLVS--TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVE-------NT---SHPGEMQVTIQNLMPAT 86 (120)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEE-------EC---SSTTCSEEEECSCCTTC
T ss_pred CCCCCcEEEecC--CCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEE-------Ee---ccCCccEEEeCCCCCCC
Confidence 478888877544 368999999865 22 224677776543222111 00 11224467899999999
Q ss_pred EEEEEeCC----C--CccceEEEECCCC
Q 011680 134 KYYYKIGD----G--DSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~----g--~~~~~~~F~T~p~ 155 (479)
.|.+||.. | ..+....|+|.+.
T Consensus 87 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 87 VYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 99999864 3 3355778999764
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0033 Score=50.38 Aligned_cols=83 Identities=17% Similarity=0.249 Sum_probs=51.6
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCCc----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..+.+.... .+++.|+|..+..... -.|+|........... .. ..-...++|++|+|+|.|
T Consensus 10 ~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~l~~L~p~t~Y 76 (108)
T 2djs_A 10 TVPIMHQVSAT--MRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSS-----MA------RSQTNTARIDGLRPGMVY 76 (108)
T ss_dssp CCSCCEEEEEC--SSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCE-----EE------EESSSEEEEESCCTTCEE
T ss_pred CCcceEEEecC--CCEEEEEECCCCCCCCeEEEEEEEEEECCCCCccee-----EE------ecCccEEEEcCCCCCCEE
Confidence 56667666433 3699999998754332 3556665543221111 00 011235689999999999
Q ss_pred EEEeCC----C--CccceEEEECCCC
Q 011680 136 YYKIGD----G--DSSREFWFQTPPK 155 (479)
Q Consensus 136 ~Y~v~~----g--~~~~~~~F~T~p~ 155 (479)
.+||.. | ..+....|+|++.
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 77 VVQVRARTVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCCS
T ss_pred EEEEEEEeCCEECCCCCCEEEEeCCC
Confidence 999874 3 3455778999875
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0095 Score=60.84 Aligned_cols=182 Identities=12% Similarity=0.062 Sum_probs=96.6
Q ss_pred CCCeEEEEEecCCCCCChH---HHHH----HHH-----------HhCCCEEEEcCcccccCCCCCC-----c--------
Q 011680 159 DAPYTFGIIGDLGQTYNSL---STLK----HYM-----------QSGGQSVLFLGDLSYADRYEYN-----D-------- 207 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~~~---~~l~----~~~-----------~~~pD~vl~~GDl~y~~~~~~~-----~-------- 207 (479)
.....+++++|+|.+.... ..++ .+. ..+...+|++||.+...+-... .
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 3567999999999987632 1222 221 1268899999999976431000 0
Q ss_pred -hhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCC---CCCCCCceEEEEcCeEEEEEe
Q 011680 208 -VGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA---SKSTNPLWYAIRRASAHIIVL 283 (479)
Q Consensus 208 -~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~---~~~~~~~yysf~~g~v~fi~L 283 (479)
.....+.+.+++..+...+|+...|||||-... ... +.++ ...+ +|... .-..-..-|.|++++++|++.
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~-~lP-Qqpl---h~~l-fp~s~~~~~~~~vtNP~~~~i~G~~~Lgt 351 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNY-TLP-QQPL---HPCM-FPLATAYSTLQLVTNPYQATIDGVRFLGT 351 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCS-SSS-CCCC---CTTS-CHHHHTSTTEEECCSSEEEEETTEEEEEC
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCCcccc-cCC-CCCc---CHHH-hhhhhhcCccEEeCCCeEEEECCEEEEEE
Confidence 012344566677778889999999999995321 000 1111 1000 11000 000012246699999999987
Q ss_pred ecCC-----CCCCCHHHHHHHHHHHhhcc-cCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccc
Q 011680 284 SSYS-----PYVKYTPQWWWLREELKKVD-REKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHV 357 (479)
Q Consensus 284 ds~~-----~~~~~~~Q~~WL~~~L~~~~-~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~ 357 (479)
.... .|...+.-++.|++.|+.-. ...+|=. -|.|..... .+++-+.-.+++|+||.
T Consensus 352 sGqnidDi~ky~~~~~~l~~me~~LkwrHlAPTaPdT-----l~~yP~~~~------------DpfVi~~~PhVyf~Gnq 414 (476)
T 3e0j_A 352 SGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDT-----LGCYPFYKT------------DPFIFPECPHVYFCGNT 414 (476)
T ss_dssp SSHHHHHHHHHSCCCCHHHHHHHHHHBTCSCTTSCCC-----------CCS------------CTTSCSSCCSEEEEEEE
T ss_pred CCCCHHHHHhcCCCCCHHHHHHHHHHHhccCCCCCCc-----eeeccCCCC------------CceeecCCCcEEEeCCC
Confidence 7532 12334456778888887610 0111100 011111000 01233445889999999
Q ss_pred ccceee
Q 011680 358 HAYERS 363 (479)
Q Consensus 358 H~yer~ 363 (479)
|.|+-.
T Consensus 415 ~~f~t~ 420 (476)
T 3e0j_A 415 PSFGSK 420 (476)
T ss_dssp SSCEEE
T ss_pred Ccccee
Confidence 998853
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0044 Score=49.98 Aligned_cols=83 Identities=17% Similarity=0.294 Sum_probs=50.9
Q ss_pred CCceEEEeecCCCCCcEEEEE--EcCCCC---CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 60 APQQVRITQGDYDGKAVIISW--VTPNEL---GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W--~t~~~~---~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
+|..|++.... .+++.|+| ..+... ..-.|+|....+ ...+... ..+ ++|+||+|+|.
T Consensus 12 ~p~~l~~~~~~--~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~~---------~~~~~~~-~~~-----~~i~~L~p~t~ 74 (107)
T 1x5a_A 12 SGLSLKLVKKE--PRQLELTWAGSRPRNPGGNLSYELHVLNQDE---------EWHQMVL-EPR-----VLLTKLQPDTT 74 (107)
T ss_dssp CSCCCCEEEEE--TTEEEEECCCCCSSCCSSCCEEEEEEECSSC---------EEEEEES-SSE-----EEEESCCSSCE
T ss_pred CCCceEEEecC--CCEEEEEECCCCCCCCCCceEEEEEEEeCCC---------CceEEEe-cce-----EEECCCCCCCE
Confidence 55566665444 36999999 655422 223556654311 0111111 111 89999999999
Q ss_pred EEEEeCC------CCccceEEEECCCCCCCC
Q 011680 135 YYYKIGD------GDSSREFWFQTPPKIHPD 159 (479)
Q Consensus 135 Y~Y~v~~------g~~~~~~~F~T~p~~~~~ 159 (479)
|.+||.. |..+....|+|.+.+++.
T Consensus 75 Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp~ 105 (107)
T 1x5a_A 75 YIVRVRTLTPLGPGPFSPDHEFRTSPPSGPS 105 (107)
T ss_dssp EEEEEEEECSSSCCCCCCCEEEECCCCSCCC
T ss_pred EEEEEEEECCCccCCCCCCEEEEECCCCCCC
Confidence 9999864 445667789999876543
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0046 Score=50.13 Aligned_cols=82 Identities=15% Similarity=0.281 Sum_probs=52.8
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+++.... .+++.|+|...... ..-.|+|.............. ...++|++|+|+|.
T Consensus 19 ~~P~~l~~~~~~--~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~ 83 (116)
T 1x5g_A 19 GPAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTE 83 (116)
T ss_dssp CCCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCE
T ss_pred cCCCccEEEecC--CCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEecC-------------CceEEEcCCCCCCE
Confidence 467777776544 35999999976422 234677766554332222111 23568999999999
Q ss_pred EEEEeCC------CCccceEEEECCCC
Q 011680 135 YYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 135 Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
|.+||.. |..+....|+|.+.
T Consensus 84 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 84 YSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 9999864 33455667888764
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0058 Score=48.69 Aligned_cols=81 Identities=14% Similarity=0.181 Sum_probs=52.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..+.+.... .+++.|+|...... ..-.|+|............. . ...++|++|+|+|.|
T Consensus 10 ~P~~l~~~~~~--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~--~~~~~i~~L~p~t~Y 74 (106)
T 2ed8_A 10 PVENLQAVSTS--PTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEV-----------D--GLSYKLEGLKKFTEY 74 (106)
T ss_dssp CCEEEEEECSS--TTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEEE-----------C--SSCEEEESCCTTCEE
T ss_pred CCceeEEEecC--CCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEeC-----------C--ccEEEECCCCCCCEE
Confidence 78888876544 36999999977422 23466776654332211110 0 234688999999999
Q ss_pred EEEeCC----C--CccceEEEECCCC
Q 011680 136 YYKIGD----G--DSSREFWFQTPPK 155 (479)
Q Consensus 136 ~Y~v~~----g--~~~~~~~F~T~p~ 155 (479)
.+||.. | ..+....++|...
T Consensus 75 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 75 SLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 999874 3 3355778888754
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0042 Score=50.71 Aligned_cols=84 Identities=14% Similarity=0.048 Sum_probs=52.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC--------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG--------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~--------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~ 130 (479)
.+|..|++..-. .+++.|+|....... .-.|+|.......... .+ ...-...++|+||+
T Consensus 10 ~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~------~~-----~~~~~~~~~i~gL~ 76 (113)
T 1x5j_A 10 MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKY------KN-----ANATTLSYLVTGLK 76 (113)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCC------EE-----CCBCSSEEEEESCC
T ss_pred CCCcceEEEEec--CCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEE------EE-----EecCcCEEEeCCCC
Confidence 478888887654 369999999764221 3466776632111100 00 01123357899999
Q ss_pred CCcEEEEEeCC------CCccceEEEECCCC
Q 011680 131 YDTKYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 131 p~t~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
|+|.|.++|.. |..+....++|.+.
T Consensus 77 P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 77 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 99999999864 34455667888765
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0047 Score=49.68 Aligned_cols=83 Identities=17% Similarity=0.270 Sum_probs=52.5
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCC--CcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKK--YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+|..+++..-. .+++.|+|..+.... .-.|+|....+. ...... . ... ..++|++|+|+|
T Consensus 10 ~p~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~------~----~~~--~~~~i~~L~p~t 75 (109)
T 2e7h_A 10 AVSDIRVTRSS--PSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFL------K----TSE--NRAELRGLKRGA 75 (109)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEE------E----ESS--SEEEEESCCTTS
T ss_pred CCCccEEEecC--CCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEE------c----cCC--CEEEECCCCCCC
Confidence 46667776444 369999998875322 346777665411 111110 0 011 267899999999
Q ss_pred EEEEEeCC------CCccceEEEECCCCC
Q 011680 134 KYYYKIGD------GDSSREFWFQTPPKI 156 (479)
Q Consensus 134 ~Y~Y~v~~------g~~~~~~~F~T~p~~ 156 (479)
.|.+||.. |..+....|+|.+..
T Consensus 76 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 76 SYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp CEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred eEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 99999864 444667789998754
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0019 Score=61.99 Aligned_cols=62 Identities=19% Similarity=0.275 Sum_probs=41.1
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
+++++||+|.. ...+..+.+. ++|.+|++||+++.+. + . .+..+.+..+ ..+++.+.||||.
T Consensus 2 ~i~vigDiHG~---~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~----~-s---~~~l~~l~~l--~~~~~~v~GNHe~ 68 (280)
T 2dfj_A 2 ATYLIGDVHGC---YDELIALLHKVEFTPGKDTLWLTGDLVARGP----G-S---LDVLRYVKSL--GDSVRLVLGNHDL 68 (280)
T ss_dssp CEEEECCCCSC---HHHHHHHHHHTTCCTTTCEEEECSCCSSSSS----C-H---HHHHHHHHHT--GGGEEECCCHHHH
T ss_pred eEEEEecCCCC---HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCC----c-c---HHHHHHHHhC--CCceEEEECCCcH
Confidence 68999999854 3344444432 5799999999997654 1 1 1223333333 2379999999995
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0047 Score=50.72 Aligned_cols=74 Identities=24% Similarity=0.383 Sum_probs=46.4
Q ss_pred CCcEEEEEEcCCCCCc----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC----CCc
Q 011680 73 GKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD----GDS 144 (479)
Q Consensus 73 ~~~~~i~W~t~~~~~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~----g~~ 144 (479)
.+++.|+|......++ -.|+|.......+..... . ++....++|.+|+|++.|.+||.. |.+
T Consensus 21 ~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~----~------~~~~~~~~l~~L~p~t~Y~frV~A~N~~G~s 90 (114)
T 2kbg_A 21 GKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK----V------QGNKDHIILEHLQWTMGYEVQITAANRLGYS 90 (114)
T ss_dssp TTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE----E------ETTTCCEEECCCCTTCCEEEEEEEECTTSCE
T ss_pred CCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE----c------CCCcCEEEEcCCCCCCEEEEEEEEEeCCcCc
Confidence 4799999986432222 378888764433322110 0 111235689999999999999874 543
Q ss_pred c-ceEEEECCCCC
Q 011680 145 S-REFWFQTPPKI 156 (479)
Q Consensus 145 ~-~~~~F~T~p~~ 156 (479)
. -...|+|.+.+
T Consensus 91 ~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 91 EPTVYEFSMPPKP 103 (114)
T ss_dssp EEEEEEECCCCCC
T ss_pred CCcCCEEEcCCCC
Confidence 2 25689997754
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0091 Score=48.49 Aligned_cols=85 Identities=21% Similarity=0.310 Sum_probs=53.3
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCc----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+.... .+++.|+|........ -.|+|............ . ...-...++|++|+|+|.
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~ 86 (119)
T 2ed7_A 19 SAPRDVVPVLVS--SRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN------T----TQPGSLQLTVGNLKPEAM 86 (119)
T ss_dssp CCCSCCEEEEEC--SSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE------C----CCTTCCEEEECSCCSSSE
T ss_pred cCCcceEEEecC--CCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE------e----ecCCceEEEeCCCCCCCE
Confidence 478888877544 3699999987653322 35556554432221110 0 112244678999999999
Q ss_pred EEEEeCC------CCccceEEEECCCC
Q 011680 135 YYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 135 Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
|.+||.. |..+....++|.+.
T Consensus 87 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 87 YTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 9999864 34456778888764
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0065 Score=48.58 Aligned_cols=85 Identities=15% Similarity=0.228 Sum_probs=51.6
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC-----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~-----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
+|..+.+.... .+ +.|+|..+.... .-.|+|.......+... +.... ..+-...++|++|+|+|.
T Consensus 9 ~P~~~~~~~~~--~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~------~~~~~-~~~~~~~~~i~~L~p~t~ 78 (105)
T 2haz_A 9 SPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK------WYDAK-EASMEGIVTIVGLKPETT 78 (105)
T ss_dssp CCEEEEEEECS--SC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE------EEEHH-HHHHHSEEEECSCCTTCE
T ss_pred CCCCCEEEEcC--Cc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccc------eEEcc-ccCCccEEEECCCCCCCE
Confidence 47666665433 34 999999774321 23577776553222110 00000 011234568999999999
Q ss_pred EEEEeCC------CCccceEEEECCC
Q 011680 135 YYYKIGD------GDSSREFWFQTPP 154 (479)
Q Consensus 135 Y~Y~v~~------g~~~~~~~F~T~p 154 (479)
|.+||.. |..+..-.|+|.|
T Consensus 79 Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 79 YAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEcCCccCCCcCCEeeEEec
Confidence 9999874 4556677899987
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0065 Score=48.59 Aligned_cols=86 Identities=16% Similarity=0.208 Sum_probs=52.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
.+|..+++..-.. +++.|+|.-......-.|+|........... .... ...- .++|+||+|+|.|.++
T Consensus 10 ~~P~~l~~~~~~~--~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~----~~~~----~~~~--~~~l~~L~p~t~Y~~~ 77 (104)
T 2dkm_A 10 PPPRALTLAAVTP--RTVHLTWQPSAGATHYLVRCSPASPKGEEEE----REVQ----VGRP--EVLLDGLEPGRDYEVS 77 (104)
T ss_dssp CCCCCCEEEEECS--SEEEEECCCCSSCSEEEEEEEESSSCCSSCC----EEEE----ESSS--EEEEESCCTTCCEEEE
T ss_pred CCCceeEEEecCC--CEEEEEEeCCCCCCeEEEEEEECCCCCCcce----EEEe----cCCC--EEEECCCCCCCEEEEE
Confidence 4777888775443 6999999776544345677776543211100 0000 0111 7899999999999999
Q ss_pred eCC----CCcc-ceEEEECCCCC
Q 011680 139 IGD----GDSS-REFWFQTPPKI 156 (479)
Q Consensus 139 v~~----g~~~-~~~~F~T~p~~ 156 (479)
|.. |.+. ....++|.|.+
T Consensus 78 V~A~~~~~~s~p~~~~~~T~p~~ 100 (104)
T 2dkm_A 78 VQSLRGPEGSEARGIRARTPTSG 100 (104)
T ss_dssp EEEECSSSBCCCEEEECCCCCCS
T ss_pred EEEECCCCCCCCEEEEEEcCCCC
Confidence 874 3332 24567787653
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.013 Score=46.42 Aligned_cols=83 Identities=14% Similarity=0.227 Sum_probs=52.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC--CCccEEEEEecCCC-CcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKK-YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~--~~~~~V~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
.+|..+.+.... .+++.|+|..... ...-.|+|...... ....+. ......++|++|+|+|.|
T Consensus 9 ~~P~~~~~~~~~--~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~~i~~L~p~t~Y 74 (106)
T 2dju_A 9 KPPIDLVVTETT--ATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD------------GVATTRYSIGGLSPFSEY 74 (106)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC------------CCCSSEEEEESCCTTCEE
T ss_pred cCCCCcEEEecc--CCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc------------CCCccEEEEeCCCCCcEE
Confidence 467778776543 3599999997631 13346777665432 111111 011224688999999999
Q ss_pred EEEeCC----C--CccceEEEECCCC
Q 011680 136 YYKIGD----G--DSSREFWFQTPPK 155 (479)
Q Consensus 136 ~Y~v~~----g--~~~~~~~F~T~p~ 155 (479)
.+||.. | ..+....++|.+.
T Consensus 75 ~~~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 75 AFRVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEEEEeCCccCCCcccEEeEcCCC
Confidence 999874 3 3355677888774
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.015 Score=47.03 Aligned_cols=85 Identities=19% Similarity=0.208 Sum_probs=53.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..|.++- -..+++.|+|...... ..-.|+|...++....... . .+-...+.|++|+|+|.|..
T Consensus 9 ~pP~~l~~~~--vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~----v-------~~~~t~~~l~~L~p~T~Y~v 75 (108)
T 2ee3_A 9 APPRHLGFSD--VSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTE----A-------PGNATSAMLGPLSSSTTYTV 75 (108)
T ss_dssp CCSSCEEEES--CCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEE----E-------ETTCCEEEECSCCSSCEEEE
T ss_pred CCCceEEEEE--ccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEE----c-------CCCcCEEEcCCCCCCCEEEE
Confidence 4677888764 3347999999876432 3447888876542211110 0 01123578999999999999
Q ss_pred EeCC----CCcc-ceEEEECCCCC
Q 011680 138 KIGD----GDSS-REFWFQTPPKI 156 (479)
Q Consensus 138 ~v~~----g~~~-~~~~F~T~p~~ 156 (479)
+|.. |.+. -...|+|.+.|
T Consensus 76 ~V~A~~~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 76 RVTCLYPGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp EEEEECTTSCEEEEEEEEECCCCC
T ss_pred EEEEEeCCCcCCCccCEEEeCCCC
Confidence 9864 4432 24479997543
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0063 Score=48.95 Aligned_cols=85 Identities=19% Similarity=0.235 Sum_probs=51.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC-C----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE-L----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~-~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.+... ...+++.|+|..... . ..-.|+|.......+..+. . +....++|++|+|+|
T Consensus 10 ~~P~~~~~~~~-~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~------~------~~~~~~~v~~L~p~t 76 (110)
T 2crz_A 10 GPCLPPRLQGR-PKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY------Q------GSEVECTVSSLLPGK 76 (110)
T ss_dssp CCCCCCEECSC-CCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE------E------ESCSEEEEESCCTTC
T ss_pred CCCCCceeccc-cCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE------e------CCcEEEEECCcCCCC
Confidence 36666766422 223699999975532 1 2346777654433222221 0 112346889999999
Q ss_pred EEEEEeCC------CCccceEEEECCCCC
Q 011680 134 KYYYKIGD------GDSSREFWFQTPPKI 156 (479)
Q Consensus 134 ~Y~Y~v~~------g~~~~~~~F~T~p~~ 156 (479)
.|.+||.. |..+....++|.+.+
T Consensus 77 ~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 77 TYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 99999864 344557778887653
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=96.53 E-value=0.018 Score=46.00 Aligned_cols=84 Identities=18% Similarity=0.297 Sum_probs=50.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCC-cceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKY-DSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
.+|..+.+.-- ..+++.|+|.-.... ..-.|+|....... .... .. .+-...++|+||+|||.|.
T Consensus 4 ~~P~~l~v~~~--t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~v------~~~~~~~~l~~L~p~t~Y~ 70 (104)
T 2rb8_A 4 DAPSQIEVKDV--TDTTALITWMPPSQPVDGFELTYGIKDVPGDRTTI-----DL------TEDENQYSIGNLKPDTEYE 70 (104)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEE-----EE------ETTCCEEEECSCCTTCEEE
T ss_pred CCCCccEEEEe--cCCeEEEEEcCCCCccceEEEEEEECcCCCceEEE-----Ec------CCCcCEEEeCCCCCCCEEE
Confidence 36878887643 346999999876422 23467786643211 1111 00 1122356899999999999
Q ss_pred EEeCC----CCc-cceEEEECCCC
Q 011680 137 YKIGD----GDS-SREFWFQTPPK 155 (479)
Q Consensus 137 Y~v~~----g~~-~~~~~F~T~p~ 155 (479)
++|.. |.+ .....|+|.+.
T Consensus 71 ~~V~A~~~~g~s~p~~~~~~T~~~ 94 (104)
T 2rb8_A 71 VSLISRRGDMSSNPAKETFTTGLA 94 (104)
T ss_dssp EEEEEEETTEECCCEEEEEECCC-
T ss_pred EEEEEEeCCccCCCEEEEEECCCC
Confidence 99864 322 22567888875
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0099 Score=48.48 Aligned_cols=86 Identities=19% Similarity=0.265 Sum_probs=52.8
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC--CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
+|..+.+.... .+++.|+|..... ...-.|+|........... .... .+....++|+||+|+|.|.+
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~---~~~~------~~~~~~~~i~~L~p~t~Y~~ 89 (119)
T 2ee2_A 21 APTEVGVKVLS--SSEISVHWEHVLEKIVESYQIRYWAAHDKEEAAN---RVQV------TSQEYSARLENLLPDTQYFI 89 (119)
T ss_dssp CCCSCEEEEEE--TTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCE---EEEE------ETTCSEEEECSCCTTCEEEE
T ss_pred CCCcEEEEEcc--CCEEEEEecCCCCCccceEEEEEEECCCcccCcE---EEEc------CCCEeEEEECCCCCCCEEEE
Confidence 56667766433 3699999998753 2234677766543211100 0000 11224678999999999999
Q ss_pred EeCC------CCccceEEEECCCCC
Q 011680 138 KIGD------GDSSREFWFQTPPKI 156 (479)
Q Consensus 138 ~v~~------g~~~~~~~F~T~p~~ 156 (479)
||.. |..+....|+|.+.+
T Consensus 90 ~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ee2_A 90 EVGACNSAGCGPPSDMIEAFTKKAS 114 (119)
T ss_dssp EEEEECSSSCCCCCCCEEEECCCCC
T ss_pred EEEEEcCCccCCCCCCEEEECCCCC
Confidence 9864 344557789997654
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0071 Score=59.73 Aligned_cols=67 Identities=18% Similarity=0.094 Sum_probs=43.2
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHHh------------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-----
Q 011680 161 PYTFGIIGDLGQTYNSLSTLKHYMQS------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA----- 223 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l~~~~~~------------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~----- 223 (479)
..+++++||+|.. ...+..+.+. ++|.+|++||+++.+. + .. +....+..+.
T Consensus 70 ~~~i~vigDiHG~---~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~----~-s~---evl~~l~~l~~~~~~ 138 (342)
T 2z72_A 70 IKKVVALSDVHGQ---YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGH----Q-VN---EVLWFMYQLDQQARD 138 (342)
T ss_dssp CCEEEEECCCTTC---HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSS----C-HH---HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCC---HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCC----C-HH---HHHHHHHHHHHHHhh
Confidence 4689999999854 3344444442 3689999999998654 2 11 2223333322
Q ss_pred hcCCeEEcCCCcccc
Q 011680 224 AYQPWIWSAGNHEIE 238 (479)
Q Consensus 224 ~~~P~~~v~GNHD~~ 238 (479)
...+++.+.||||..
T Consensus 139 ~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 139 AGGMVHLLMGNHEQM 153 (342)
T ss_dssp TTCEEEECCCHHHHH
T ss_pred CCCeEEEEecCCcHH
Confidence 234589999999963
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.014 Score=47.58 Aligned_cols=92 Identities=15% Similarity=0.112 Sum_probs=54.0
Q ss_pred CCCCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcc----eEEeeEEEEeeeccccceEEEEEecCCCC
Q 011680 57 GHNAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDS----SAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (479)
Q Consensus 57 ~~~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~----~~~~~~~~~~~~~~~~~~~h~v~l~gL~p 131 (479)
.+.+|.+|+++--. .+++.|+|...... ..-.|+|....+.... .-....... ++-...++|+||+|
T Consensus 8 ~pp~p~~L~v~~~T--~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v------~~~~t~~~l~gL~P 79 (112)
T 2cui_A 8 SRPRLSQLSVTDVT--TSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMV------PGTRHSAVLRDLRS 79 (112)
T ss_dssp CCCCCCCCEEESCC--SSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEE------ETTCCEEEECSCCT
T ss_pred CCCCCCceEEEeec--CCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEEc------CCCcCEEEeCCCCC
Confidence 34477788887544 46999999976432 3457888765432000 000000010 11223689999999
Q ss_pred CcEEEEEeCC----CCc-cceEEEECCCCC
Q 011680 132 DTKYYYKIGD----GDS-SREFWFQTPPKI 156 (479)
Q Consensus 132 ~t~Y~Y~v~~----g~~-~~~~~F~T~p~~ 156 (479)
+|.|..+|.. +.+ .-....+|.+.+
T Consensus 80 gT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 80 GTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp TCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred CCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 9999999864 222 235567887754
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.006 Score=59.25 Aligned_cols=66 Identities=17% Similarity=0.155 Sum_probs=42.0
Q ss_pred eEEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCc
Q 011680 162 YTFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNH 235 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNH 235 (479)
.++.++||+|.. ...+.++.+. ..+.+|++||+++.+. + . .+....+..+.... .++.+.|||
T Consensus 50 ~~i~viGDIHG~---~~~L~~ll~~~~~~~~~~~vflGD~VDRG~----~-s---~evl~lL~~lk~~~p~~v~~lrGNH 118 (309)
T 2ie4_C 50 CPVTVCGDVHGQ---FHDLMELFRIGGKSPDTNYLFMGDYVDRGY----Y-S---VETVTLLVALKVRYRERITILRGNH 118 (309)
T ss_dssp SSEEEECCCTTC---HHHHHHHHHHHCCTTTSCEEECSCCSSSST----T-H---HHHHHHHHHHHHHCTTTEEECCCTT
T ss_pred CCEEEEecCCCC---HHHHHHHHHHcCCCCCCEEEEeCCccCCCC----C-h---HHHHHHHHHHHhhCCCcEEEEeCCC
Confidence 468999999854 3344444433 5678899999998755 1 1 12233333333223 489999999
Q ss_pred ccc
Q 011680 236 EIE 238 (479)
Q Consensus 236 D~~ 238 (479)
|..
T Consensus 119 E~~ 121 (309)
T 2ie4_C 119 ESR 121 (309)
T ss_dssp SST
T ss_pred CHH
Confidence 964
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.029 Score=45.05 Aligned_cols=81 Identities=14% Similarity=0.195 Sum_probs=48.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..|++.-.. .+++.|+|....... .-.|.|..... . ... ..-...++|+||+|||.
T Consensus 9 s~v~~l~v~~~t--~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--------~-~~~------~~~~t~~~i~gL~PgT~ 71 (104)
T 2dle_A 9 IQVFDVTAVNIS--ATSLTLIWKVSDNESSSNYTYKIHVAGETD--------S-SNL------NVSEPRAVIPGLRSSTF 71 (104)
T ss_dssp CBEEEEEEEEEC--SSCEEEEEEESCSTTCCSCEEEEEEECSSC--------E-EEE------EESSSEEECCSCCSSCE
T ss_pred CCCceEEEEEee--cCEEEEEEcCCCCCCCceEEEEEEEECCCC--------e-EEE------cCCCCEEEECCCCCCCE
Confidence 356666665443 369999999764332 24566653311 0 010 01124679999999999
Q ss_pred EEEEeCC--CC--c-cceEEEECCCCC
Q 011680 135 YYYKIGD--GD--S-SREFWFQTPPKI 156 (479)
Q Consensus 135 Y~Y~v~~--g~--~-~~~~~F~T~p~~ 156 (479)
|.++|.. |. . +....++|.|.+
T Consensus 72 Y~~~V~A~~~~~~~~p~~~~~~T~p~p 98 (104)
T 2dle_A 72 YNITVCPVLGDIEGTPGFLQVHTPPVP 98 (104)
T ss_dssp EEEEEEEESSSCCCBCEEEEEECCCCS
T ss_pred EEEEEEEEECCcccCCeeEEEEccCCC
Confidence 9999875 22 1 235667888754
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.018 Score=47.87 Aligned_cols=83 Identities=18% Similarity=0.368 Sum_probs=50.5
Q ss_pred CCCc-eEEEeecCCCCCcEEEEEEcCCCCC-cc-EEEEEecCC-----------CCcceEEeeEEEEeeeccccceEEEE
Q 011680 59 NAPQ-QVRITQGDYDGKAVIISWVTPNELG-SN-RVQYGKLEK-----------KYDSSAEGTVTNYTFYKYKSGYIHHC 124 (479)
Q Consensus 59 ~~P~-~v~lt~~~~~~~~~~i~W~t~~~~~-~~-~V~y~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~h~v 124 (479)
.+|. .+.+..-. .+++.|+|..+...+ .. .|+|..... ..+..+. . . . ...+
T Consensus 17 ~~P~~~~~~~~~~--~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~-~----~-----~--~~~~ 82 (127)
T 2dmk_A 17 NPPSIREELCTAS--HDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVP-N----I-----K--QNHY 82 (127)
T ss_dssp CCCEEEEEEEEEE--TTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEE-E----E-----C--SSEE
T ss_pred cCCCCCCEEEeee--CCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEee-c----c-----c--CCeE
Confidence 4677 66666443 369999999886432 23 677875211 1111111 0 0 0 1245
Q ss_pred EecCCCCCcEEEEEeCC----CC-ccceEEEECCCC
Q 011680 125 LVDDLEYDTKYYYKIGD----GD-SSREFWFQTPPK 155 (479)
Q Consensus 125 ~l~gL~p~t~Y~Y~v~~----g~-~~~~~~F~T~p~ 155 (479)
+++||+|+|+|.|||.. |. .+....++|++.
T Consensus 83 ~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 83 TVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred EECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 78999999999999875 43 234667888874
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.029 Score=43.01 Aligned_cols=66 Identities=20% Similarity=0.369 Sum_probs=40.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
.+|..+.+.... .+++.|+|..... ......|....+. .. . +. ... -..++++|+||++|+|+
T Consensus 5 ~~P~~l~~~~~~--~~sv~L~W~~~~~-~~~i~~Y~v~~~~-~~-~-~~---------~~~--~~~~~~~L~~~t~Y~~~ 67 (88)
T 1k85_A 5 TAPTNLASTAQT--TSSITLSWTASTD-NVGVTGYDVYNGT-AL-A-TT---------VTG--TTATISGLAADTSYTFT 67 (88)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSC-CSSEEEEEEEESS-SE-E-EE---------ESS--SEEEECCCCSSCEEEEE
T ss_pred CCCCccEEEecc--CCEEEEEECCCCC-CCCccEEEEEECC-EE-E-ee---------cCC--CEEEeCCCCCCCEEEEE
Confidence 467777777544 3699999987653 2235555543221 11 1 11 011 13578999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 68 V~A 70 (88)
T 1k85_A 68 VKA 70 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0033 Score=50.92 Aligned_cols=73 Identities=19% Similarity=0.313 Sum_probs=45.1
Q ss_pred CCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC----C--
Q 011680 73 GKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD----G-- 142 (479)
Q Consensus 73 ~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~----g-- 142 (479)
.+++.|+|....... .-.|+|.......+..+ +. +....++|++|+|+|.|.+||.. |
T Consensus 24 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~------~~------~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s 91 (110)
T 2db8_A 24 NNSATLSWKQPPLSTVPADGYILELDDGNGGQFREV------YV------GKETMCTVDGLHFNSTYNARVKAFNKTGVS 91 (110)
T ss_dssp SSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEE------EE------ESCSCEEEECCCSSSCCEEEEEEECSSCBC
T ss_pred CCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEE------Ee------CCcCEEEECCCCCCCEEEEEEEEEeCCcCC
Confidence 468999998765322 23567765432222111 10 01124678999999999999864 3
Q ss_pred CccceEEEECCCCCC
Q 011680 143 DSSREFWFQTPPKIH 157 (479)
Q Consensus 143 ~~~~~~~F~T~p~~~ 157 (479)
..+....++|.+.+.
T Consensus 92 ~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 92 PYSKTLVLQTSEGSG 106 (110)
T ss_dssp CCCSCEECCCCCCCC
T ss_pred CCCCCEEEEcCCCCC
Confidence 345677889987643
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.012 Score=47.12 Aligned_cols=72 Identities=24% Similarity=0.297 Sum_probs=44.2
Q ss_pred CCcEEEEEEcCCCC-----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC----CC
Q 011680 73 GKAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD----GD 143 (479)
Q Consensus 73 ~~~~~i~W~t~~~~-----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~----g~ 143 (479)
.+++.|+|...... ..-.|+|........... .+. +....+++++|+|+|.|.+||.. |.
T Consensus 21 ~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~~------~~~~~~~v~~L~p~t~Y~frV~A~n~~G~ 89 (109)
T 1x5x_A 21 ITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKP-----KYD------GEDLAYTVKNLRRSTKYKFKVIAYNSEGK 89 (109)
T ss_dssp SSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEE-----EEE------ESCSEEEEESCCSSCEEEEEEEEECSSCE
T ss_pred CCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEE-----eEe------CCccEEEECCCCCCCEEEEEEEEEeCCCC
Confidence 36999999876532 224566765543211111 111 01234688999999999999875 32
Q ss_pred --ccceEEEECCCC
Q 011680 144 --SSREFWFQTPPK 155 (479)
Q Consensus 144 --~~~~~~F~T~p~ 155 (479)
.+....++|.+.
T Consensus 90 s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 90 SNPSEVVEFTTCPD 103 (109)
T ss_dssp EEECCCEEEECCCC
T ss_pred cCCccCEEeEeCCC
Confidence 345677888774
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.012 Score=47.44 Aligned_cols=84 Identities=15% Similarity=0.281 Sum_probs=52.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC--CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~--~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
.+|..+++.... .+++.|+|...... ..-.|+|............ . .-...++|++|+|+|.|.
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----~--------~~~~~~~i~~L~p~t~Y~ 84 (115)
T 1x5z_A 19 GQPLNFKAEPES--ETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----I--------EPGTSYRLQGLKPNSLYY 84 (115)
T ss_dssp CCCEEEEEECSS--SSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----E--------CSSSEEEEECCCTTCEEE
T ss_pred CCCccCEeeeCC--CCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEe----c--------CCCcEEEECCCCCCCeEE
Confidence 377777776433 46999999987532 2335566554332211100 0 012457899999999999
Q ss_pred EEeCC----C--CccceEEEECCCCC
Q 011680 137 YKIGD----G--DSSREFWFQTPPKI 156 (479)
Q Consensus 137 Y~v~~----g--~~~~~~~F~T~p~~ 156 (479)
+||.. | ..+....|+|.+.+
T Consensus 85 ~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 85 FRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp ECEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEEEECCCcccCCCcCEEEecCCCC
Confidence 99864 3 33557789998753
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.012 Score=48.74 Aligned_cols=86 Identities=12% Similarity=0.235 Sum_probs=53.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+.... .+++.|+|..+.... .-.|+|........... ... .......++|++|+|+|.
T Consensus 29 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~---~~~------~~~~~~~~~i~~L~p~t~ 97 (130)
T 1wfo_A 29 GPPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTAT---VEV------LAPSARQYTATGLKPESV 97 (130)
T ss_dssp CCCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCC---EEE------ECTTCCEEEEESCCSSSE
T ss_pred CCCCceEEEecC--CCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEE---EEE------eCCCceEEEEcCCCCCCE
Confidence 477778777544 369999998775332 34667766543211000 001 112345678899999999
Q ss_pred EEEEeCC----C--CccceEEEECCCC
Q 011680 135 YYYKIGD----G--DSSREFWFQTPPK 155 (479)
Q Consensus 135 Y~Y~v~~----g--~~~~~~~F~T~p~ 155 (479)
|.+||.. | ..+....|+|.+.
T Consensus 98 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 98 YLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 9999864 3 3345667888764
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.024 Score=46.00 Aligned_cols=84 Identities=17% Similarity=0.309 Sum_probs=49.5
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCcc----EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~----~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+..... +++.|.|......+.. .|+|........... .+. ... ..+++++|+|+|.
T Consensus 19 ~~P~~~~~~~~~~--~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~~----~~~--~~~~v~~L~p~t~ 85 (118)
T 1x3d_A 19 DIPNPPRIANRTK--NSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQ-----CYM----GSQ--KQFKITKLSPAMG 85 (118)
T ss_dssp CCCCCCEEEEEET--TEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEE-----EEE----ESC--SEEEEESCCTTCE
T ss_pred cCCCCcEEeccCC--CEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEE-----eec----cCC--cEEEeCCCCCCCE
Confidence 3566666664433 5999999987543333 344443332111111 111 011 3468899999999
Q ss_pred EEEEeCC----C--CccceEEEECCCC
Q 011680 135 YYYKIGD----G--DSSREFWFQTPPK 155 (479)
Q Consensus 135 Y~Y~v~~----g--~~~~~~~F~T~p~ 155 (479)
|.|||.. | ..+..-.++|.+.
T Consensus 86 Y~frV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 86 CKFRLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp EEEECCEEESSCBCCCCCCEEEECSCC
T ss_pred EEEEEEEEECCCCCCCccCEEEEcCCC
Confidence 9999874 3 3355667888764
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.022 Score=45.73 Aligned_cols=68 Identities=21% Similarity=0.333 Sum_probs=40.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCC-C-CcceEEe-eEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEK-K-YDSSAEG-TVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
.+|..|..+.... .+++.|+|..... ......|+.... . ....+.+ ..++| +.++|++|++|
T Consensus 6 ~aP~~l~a~~~~~-~~~v~LsW~~~~~-~~~Y~VyR~~~~~~~~~~i~~~~~~tsy-------------~d~~l~~g~~Y 70 (103)
T 3mpc_A 6 AFPTGLSAVLDSS-GNTANLTWNAAPG-ANSYNVKRSTKSGGPYTTIATNITSTNY-------------TDTGVATGTKY 70 (103)
T ss_dssp CCCEEEEEEECTT-SCCEEEEEECCTT-CSEEEEEEESSTTCCCEEEEEEECSSEE-------------EETTCCTTCCC
T ss_pred CCCceeEEEEeCC-CCEEEEEEECCCC-CCEEEEEEecCCCCCcEEEeecCCCCEE-------------EECCCCCCCEE
Confidence 4788888775432 2589999998653 344444554332 1 1221211 11122 44799999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
+|+|..
T Consensus 71 ~Y~V~A 76 (103)
T 3mpc_A 71 YYVVSA 76 (103)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999874
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.11 Score=40.82 Aligned_cols=71 Identities=18% Similarity=0.324 Sum_probs=45.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..+.+..-. .+++.|+|.-+... ..-.|+|........... .. ...-.-.++|+||+|+|.|.+
T Consensus 3 ~~P~~l~~~~~~--~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~----~~------~~~~~t~~~i~~L~p~t~Y~~ 70 (100)
T 3b83_A 3 QPPFNIKVTNIT--LTTAVVTWQPPILPIEGILVTFGRKNDPSDETT----VD------LTSSITSLTLTNLEPNTTYEI 70 (100)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEEESSCTTTCEE----EE------ECTTEEEEEECSCCTTCEEEE
T ss_pred ccCCccEEEEec--CCEEEEEEcCCcccCCEEEEEEEECCCCCCceE----EE------ECCcceEEEECCCCCCCEEEE
Confidence 367778777433 46999999876432 234677876543211110 00 112344678999999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 71 ~V~A 74 (100)
T 3b83_A 71 RIVA 74 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.09 E-value=0.009 Score=58.48 Aligned_cols=64 Identities=20% Similarity=0.229 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh--cCCeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA--YQPWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD 236 (479)
++.++||+|.. ...+..+.+. ..+-+|++||+++.+. + . .+....+..+.. .-.++.+.||||
T Consensus 58 ~i~viGDIHG~---~~~L~~ll~~~g~~~~~~~vflGD~VDRG~----~-s---~evl~lL~~lk~~~p~~v~~lrGNHE 126 (330)
T 1fjm_A 58 PLKICGDIHGQ---YYDLLRLFEYGGFPPESNYLFLGDYVDRGK----Q-S---LETICLLLAYKIKYPENFFLLRGNHE 126 (330)
T ss_dssp SEEEECBCTTC---HHHHHHHHHHHCSTTSSCEEECSCCSSSSS----C-H---HHHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred ceEEecCCCCC---HHHHHHHHHHhCCCCcceEEeCCCcCCCCC----C-h---HHHHHHHHHhhhhcCCceEEecCCch
Confidence 58999999865 3444444443 4578999999998765 2 1 122333333322 235899999999
Q ss_pred c
Q 011680 237 I 237 (479)
Q Consensus 237 ~ 237 (479)
.
T Consensus 127 ~ 127 (330)
T 1fjm_A 127 C 127 (330)
T ss_dssp S
T ss_pred H
Confidence 6
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=96.08 E-value=0.037 Score=43.95 Aligned_cols=84 Identities=14% Similarity=0.205 Sum_probs=49.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC------CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE------LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~------~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..+.+..-. .+++.|+|..+.. ...-.|.|........... ...+.. +-..++.|++|+|+
T Consensus 6 ~~P~~~~~~~~s--~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~--~~~~v~------~~~~~~~l~~L~p~ 75 (102)
T 3n1f_C 6 TGPHIAYTEAVS--DTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDY--KRDVVE------GSKQWHMIGHLQPE 75 (102)
T ss_dssp SCCEEEEEEECS--SSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGC--EEEEEE------TTCSEEEECSCCTT
T ss_pred CCCceeEEEEcC--CCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCce--EEEEEc------CCceEEECCCCCCC
Confidence 378777776433 3699999997642 1223788887653210000 001111 11224689999999
Q ss_pred cEEEEEeCC------CCccceEEEEC
Q 011680 133 TKYYYKIGD------GDSSREFWFQT 152 (479)
Q Consensus 133 t~Y~Y~v~~------g~~~~~~~F~T 152 (479)
|.|..+|.. |..|....++|
T Consensus 76 t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 76 TSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp CEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred CEEEEEEEEECCCcCCCCCCCEEeec
Confidence 999999864 44455666666
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.017 Score=46.98 Aligned_cols=88 Identities=16% Similarity=0.258 Sum_probs=53.7
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC--C----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE--L----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~--~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+|..+.+.... .+++.|+|..... . ..-.|+|........... ..... ...+-...++|++|+|+|
T Consensus 18 ~P~~~~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~i~~L~p~t 89 (122)
T 1va9_A 18 PPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY--SIVEM----KATGDSEVYTLDNLKKFA 89 (122)
T ss_dssp CCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC--BCCBC----CCCSSEEEEEEESCCSSC
T ss_pred CCcceEEEecc--CCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce--EEEEE----ecCCceeEEEeCCCCCCC
Confidence 67778776443 3699999998753 1 234677766543211000 00000 012335677899999999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 011680 134 KYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
.|.++|.. |..+....|+|.+.
T Consensus 90 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 90 QYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp CEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 99999874 34455677888764
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.014 Score=47.31 Aligned_cols=85 Identities=15% Similarity=0.151 Sum_probs=52.3
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
..+|..+.+... .+++.|+|.-+... ..-.|+|... +..+..+... . ..-..++++.+|+|++
T Consensus 8 ~~pP~~l~v~~~---~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~~---~------~~~~t~~~v~~L~pg~ 74 (108)
T 1v5j_A 8 LSPPRGLVAVRT---PRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDPA---V------AGTETELLVPGLIKDV 74 (108)
T ss_dssp CCCCEEEEEEEC---SSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEEE---E------CSSCCEEECCCCCTTS
T ss_pred CCCCcceEEEEe---CCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeeee---c------CCCcCEEEeCCCCCCC
Confidence 358888888642 36899999987642 2337788773 2223222111 1 1223456799999999
Q ss_pred EEEEEeCC----C--CccceEEEECCCC
Q 011680 134 KYYYKIGD----G--DSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~----g--~~~~~~~F~T~p~ 155 (479)
+|.+||.. | ..|....++|...
T Consensus 75 ~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 75 LYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp CEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 99999875 2 2344555566554
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0061 Score=51.81 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=27.7
Q ss_pred EEEEecCCCCCcEEEEEeCC------CCccceEEEECCCC
Q 011680 122 HHCLVDDLEYDTKYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 122 h~v~l~gL~p~t~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
..++|+||+|+|.|..||.. |..+....|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 46789999999999999864 55566778999874
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.02 E-value=0.009 Score=48.79 Aligned_cols=84 Identities=18% Similarity=0.238 Sum_probs=48.2
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-----CccEEEEEecCCC-CcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-----GSNRVQYGKLEKK-YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-----~~~~V~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..+.+... ...+++.|+|...... ..-.|+|...... .+..+ +. +...++++++|+|+
T Consensus 19 ~~P~~~~~~~~-~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~------~~------~~~~~~~v~~L~p~ 85 (120)
T 2crm_A 19 GIPVKPSVKGK-IHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMI------YS------GATREHLCDRLNPG 85 (120)
T ss_dssp CCCCCCEEEEE-EETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEE------EC------SSCSEEEECSCCTT
T ss_pred CCCCCCEEeec-cCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEE------Ee------ccccEEEECCCCCC
Confidence 35555555411 1236999999876432 2346666655431 22111 10 11234688999999
Q ss_pred cEEEEEeCC------CCccceEEEECCCC
Q 011680 133 TKYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 133 t~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
|.|.|||.. |..+....++|.+.
T Consensus 86 t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 86 CFYRLRVYCISDGGQSAVSESLLVQTPAV 114 (120)
T ss_dssp SCEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred CEEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence 999999874 23344556777654
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.00 E-value=0.033 Score=45.12 Aligned_cols=83 Identities=17% Similarity=0.217 Sum_probs=50.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..|++..-. .+++.|+|..+... ..-.|+|........ . ... ..-...++|++|+|+|.|.+
T Consensus 9 ~~P~~l~~~~~t--~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~-~-----~~v------~~~~t~~~l~~L~P~t~Y~~ 74 (115)
T 2cuh_A 9 DGPTQLRALNLT--EGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-Q-----AET------PGSAVDYPLHDLVLHTNYTA 74 (115)
T ss_dssp SSCEEEECCCCS--SSCEEEEEECCSSCCSEEEEEEECSSSCCE-E-----EEE------ETTCSEEEECSCCSSSEEEE
T ss_pred CCCcceEEEecc--CCeEEEEEECCCCCccEEEEEEEcCCCCcE-E-----EEE------CCCccEEEEeCCCCCCEEEE
Confidence 467777665433 47999999875422 234677765432111 0 000 11223578999999999999
Q ss_pred EeCC--C--Cc-cceEEEECCCC
Q 011680 138 KIGD--G--DS-SREFWFQTPPK 155 (479)
Q Consensus 138 ~v~~--g--~~-~~~~~F~T~p~ 155 (479)
+|.. | .+ .....|+|.+.
T Consensus 75 ~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 75 TVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp EEEEEETTEECCCEEEEEESCCC
T ss_pred EEEEEeCCCcCCCEEEEEEeCCC
Confidence 9875 2 11 23567888764
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=95.98 E-value=0.03 Score=44.37 Aligned_cols=70 Identities=14% Similarity=0.254 Sum_probs=44.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC---CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE---LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~---~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
+|..|++.--. .+++.|+|..+.. ...-.|+|....+...... ... ..-...++|+||+|||.|.
T Consensus 7 ~P~~l~v~~~t--~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~~----~~v------~~~~t~~~l~~L~p~t~Y~ 74 (101)
T 3k2m_C 7 VPTKLEVVAAT--PTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQE----FTV------PYSSSTATISGLSPGVDYT 74 (101)
T ss_dssp SSCEEEEEEEE--TTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCEE----EEE------ETTCCEEEECSCCTTCEEE
T ss_pred CCcceEEeecC--CCEEEEEecCCCCCCceeeEEEEEEECCCCCccEE----EEc------CCCccEEEECCCCCCCEEE
Confidence 67788887543 3699999997651 1234678877543211100 011 1112467899999999999
Q ss_pred EEeCC
Q 011680 137 YKIGD 141 (479)
Q Consensus 137 Y~v~~ 141 (479)
.+|..
T Consensus 75 ~~V~A 79 (101)
T 3k2m_C 75 ITVYA 79 (101)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.01 Score=49.12 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=26.9
Q ss_pred EEEecCCCCCcEEEEEeCC----CC--ccceEEEECCCCC
Q 011680 123 HCLVDDLEYDTKYYYKIGD----GD--SSREFWFQTPPKI 156 (479)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~----g~--~~~~~~F~T~p~~ 156 (479)
.+++++|+|+|+|.+||.. |. .++...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 4789999999999999875 43 3567789998753
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.048 Score=44.45 Aligned_cols=81 Identities=19% Similarity=0.357 Sum_probs=51.8
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC--C----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE--L----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~--~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+|..+.+..... +++.|+|..+.. . ..-.|+|....+...... . ......+.|++|+|+|
T Consensus 31 ~P~~l~~~~~~~--~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------~------~~~~~~~~i~~L~p~t 96 (124)
T 2ed9_A 31 PPQNVSLEVVNS--RSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------L------EPNNLWYLFTGLEKGS 96 (124)
T ss_dssp CCBSCCEEEEET--TEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------E------CSSCSEEEEECCCSSC
T ss_pred CCeeeEEEEcCC--CEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------e------cCCcCEEEEcCCCCCC
Confidence 577777765443 599999998753 1 224677776554322111 1 1223456899999999
Q ss_pred EEEEEeCC------CCccceEEEECCC
Q 011680 134 KYYYKIGD------GDSSREFWFQTPP 154 (479)
Q Consensus 134 ~Y~Y~v~~------g~~~~~~~F~T~p 154 (479)
.|.++|.. |..+....|+|+.
T Consensus 97 ~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 97 QYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999864 3445677788864
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.087 Score=47.17 Aligned_cols=84 Identities=14% Similarity=0.057 Sum_probs=51.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC--------CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE--------LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~--------~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~ 130 (479)
.+|..+.+.... .+++.|+|..+.. ...-.|+|............. ..-...++|++|+
T Consensus 6 ~~P~~l~~~~~~--~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~ 72 (211)
T 3p4l_A 6 MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA-----------NATTLSYLVTGLK 72 (211)
T ss_dssp CCCEEEEEEECS--SSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEE-----------EESSSEEEECSCC
T ss_pred CCCCCEEEEecC--CCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEe-----------CCCceEEEecCcC
Confidence 368788876544 3699999997531 123467776654321111110 1113356899999
Q ss_pred CCcEEEEEeCC------CCccceEEEECCCC
Q 011680 131 YDTKYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 131 p~t~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
|+|.|.++|.. |..+....++|.+.
T Consensus 73 p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 73 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred CCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 99999999874 23344678888653
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.029 Score=45.79 Aligned_cols=71 Identities=15% Similarity=0.329 Sum_probs=45.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..+.+.-.. .+++.|+|...... ..-.|+|....+..... . ... .+-...++|+||+|+|.|..
T Consensus 5 ~~P~~L~v~~~t--~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~-~~v------~~~~ts~~l~gL~P~T~Y~v 72 (114)
T 3qwq_B 5 DVPRDLEVVAAT--PTSLLISWDSGRGSYQYYRITYGETGGNSPVQ---E-FTV------PGPVHTATISGLKPGVDYTI 72 (114)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECCSCCCSEEEEEEEESSCSSCCE---E-EEE------ETTCCEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecC--CCEEEEEEcCCcCcccEEEEEEEECCCCCccE---E-EEe------CCCcCEEEeCCCCCCCEEEE
Confidence 478888887544 36999999986432 34577887765421100 0 011 12233578999999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 73 ~V~A 76 (114)
T 3qwq_B 73 TVYA 76 (114)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=95.87 E-value=0.074 Score=47.53 Aligned_cols=87 Identities=14% Similarity=0.196 Sum_probs=52.2
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC-----CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE-----LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~-----~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.+..... ++.|+|..... ...-.|+|.......+.... +. .........++|++|+|+|
T Consensus 10 ~~P~~~~~~~~~~---s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~i~~L~p~t 79 (209)
T 2vkw_A 10 SSPSIDQVEPYSS---TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW-----YD--AKEASMEGIVTIVGLKPET 79 (209)
T ss_dssp CCCEEEEEEECSS---CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEE-----EE--HHHHHHHSEEEECCCCTTC
T ss_pred cCCcccEeeeccC---eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeE-----ee--ccCCCccceEEeCCCCCCC
Confidence 4688888765432 58999998742 22345777765433222111 00 0001122356889999999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 011680 134 KYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
.|.|||.. |..+....++|.+.
T Consensus 80 ~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 80 TYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred eEEEEEEEEcCCcccCCcccccccccCC
Confidence 99999864 33345667888764
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.87 E-value=0.075 Score=50.16 Aligned_cols=99 Identities=20% Similarity=0.164 Sum_probs=59.1
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCC-CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~-~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
+.+|..|.+..... +++.|+|...+. ...-.|+|............ .. ..-...+.|++|+|+|.|.
T Consensus 21 p~~P~~l~~~~~~~--~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~ 88 (290)
T 3r8q_A 21 IPAPTDLKFTQVTP--TSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----NL------APDSSSVVVSGLMVATKYE 88 (290)
T ss_dssp CCCCEEEEEEEECS--SCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE----EE------CTTCCEEEECSCCSSCEEE
T ss_pred CCCCCceEEEECCC--CEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE----Ec------CCCccEEEeCCCCCCCEEE
Confidence 45788888875443 599999998753 23456777765432221110 11 1223467899999999999
Q ss_pred EEeCC----CC--ccceEEEECCCCCCCCCCeEEEEEec
Q 011680 137 YKIGD----GD--SSREFWFQTPPKIHPDAPYTFGIIGD 169 (479)
Q Consensus 137 Y~v~~----g~--~~~~~~F~T~p~~~~~~~~~f~~~gD 169 (479)
++|.. |. .+ ...++|.+.+.....+++..+++
T Consensus 89 ~~V~a~~~~g~s~~s-~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 89 VSVYALKDTLTSRPA-QGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp EEEEEEETTEECCCE-EEEEECCCCCCCCEEEEEEEECS
T ss_pred EEEEEEeCCCCCCCc-ceeEecCCCCCCCceeEEEEcCC
Confidence 99874 22 23 45678876543333344443333
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.061 Score=42.48 Aligned_cols=80 Identities=23% Similarity=0.442 Sum_probs=48.1
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|. +.+... ..+++.|+|....... .-.|+|........... .. .....+++|++|+|+|.|
T Consensus 10 ~p~-~~v~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y 75 (107)
T 2dn7_A 10 RPT-MMISTT--AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-----DF------GKDDQHFTVTGLHKGTTY 75 (107)
T ss_dssp CCE-EEEEEC--STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-----EE------ETTCCEEEEECCCTTCEE
T ss_pred CCc-EeEEec--CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEE-----Ee------CCCccEEEeCCCCCCCEE
Confidence 455 566544 3469999999875322 34677776553322211 00 112235789999999999
Q ss_pred EEEeCC----C--CccceEEEECCC
Q 011680 136 YYKIGD----G--DSSREFWFQTPP 154 (479)
Q Consensus 136 ~Y~v~~----g--~~~~~~~F~T~p 154 (479)
.+||.. | ..+ .-.|+|++
T Consensus 76 ~~~V~A~n~~G~g~~s-~~~~~T~~ 99 (107)
T 2dn7_A 76 IFRLAAKNRAGLGEEF-EKEIRTPE 99 (107)
T ss_dssp EEEEEEEETTEEEEEE-EEEEECCC
T ss_pred EEEEEEEcCCcccCCe-eeEEeCCC
Confidence 999875 3 233 24577754
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=95.84 E-value=0.018 Score=55.85 Aligned_cols=66 Identities=15% Similarity=0.071 Sum_probs=40.8
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh--cCCeEEcCC
Q 011680 161 PYTFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA--YQPWIWSAG 233 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~G 233 (479)
..+++++||+|.. ...+.++.+. ..+.+|++||+++.+. + . .+....+..+.. ...++.+.|
T Consensus 59 ~~ri~viGDIHG~---~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~----~-s---~evl~lL~~lk~~~p~~v~~lrG 127 (315)
T 3h63_A 59 TEKITVCGDTHGQ---FYDLLNIFELNGLPSETNPYIFNGDFVDRGS----F-S---VEVILTLFGFKLLYPDHFHLLRG 127 (315)
T ss_dssp TCEEEEECCCTTC---HHHHHHHHHHHCCCBTTBCEEEESCCSSSST----T-H---HHHHHHHHHHHHHSTTTEEEECC
T ss_pred CceEEEEecCCCC---HHHHHHHHHHhCCCCCCCEEEEeCCccCCCc----C-h---HHHHHHHHHhhhhcCCcEEEEec
Confidence 3689999999865 3344444433 2346999999998765 1 1 112233333322 234889999
Q ss_pred Cccc
Q 011680 234 NHEI 237 (479)
Q Consensus 234 NHD~ 237 (479)
|||.
T Consensus 128 NHE~ 131 (315)
T 3h63_A 128 NHET 131 (315)
T ss_dssp TTSS
T ss_pred Cccc
Confidence 9995
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.034 Score=45.67 Aligned_cols=86 Identities=14% Similarity=0.195 Sum_probs=49.6
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC-c----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG-S----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~-~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
+|..+.+.... .+ +.|+|..+.... . -.|+|.......+... +... ....-...++|++|+|+|+
T Consensus 10 ~P~~~~~~~~~--~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~------~~~~-~~~~~~~~~~i~~L~p~t~ 79 (122)
T 2e3v_A 10 SPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK------WYDA-KEASMEGIVTIVGLKPETT 79 (122)
T ss_dssp CCEEEEEEECS--SC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEE------EEEH-HHHHTTTEEEECSCCTTCE
T ss_pred CCCccEEEecC--Cc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccc------eeee-eecCccceEEeCCCCCCCE
Confidence 47667666433 34 999999774322 2 2456655543222111 0000 0001123578999999999
Q ss_pred EEEEeCC------CCccceEEEECCCC
Q 011680 135 YYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 135 Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
|.+||.. |..+....|+|.|.
T Consensus 80 Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 80 YAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred EEEEEEEEeCCccCCCcccccccccCC
Confidence 9999874 44455667888775
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.82 E-value=0.043 Score=44.69 Aligned_cols=72 Identities=21% Similarity=0.287 Sum_probs=43.2
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecC-CCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLE-KKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.+.... .+++.|.|.-.... ..-.|+|.... ...+..+... ...-...++|++|+|+|
T Consensus 19 ~~P~~~~~~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---------~~~~~~~~~v~~L~p~t 87 (121)
T 1x4z_A 19 EAPDRPTISTAS--ETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA---------IPPSRLSVEITGLEKGI 87 (121)
T ss_dssp CCCCCCEEEECC--SSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE---------ECTTCCEEEEESCCTTC
T ss_pred ccCCCCEEEEcc--CCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecc---------cCCCcCEEEECCCCCCC
Confidence 466667766433 36999999944322 22467777654 2222221110 01223456889999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
+|.|||..
T Consensus 88 ~Y~frV~A 95 (121)
T 1x4z_A 88 SYKFRVRA 95 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999875
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.057 Score=41.73 Aligned_cols=84 Identities=18% Similarity=0.220 Sum_probs=53.2
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCC--CccEEEEEecCCCC-cceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKY-DSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~--~~~~V~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
...|.|+.++-.....++-.|.|..+... ..-.+.|....... +..+. -++....-+|+||+||..
T Consensus 5 ~~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~-----------Ip~h~nSYtI~GL~P~~~ 73 (98)
T 1oww_A 5 SSGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVV 73 (98)
T ss_dssp -CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEE-----------ECSSCCEEEECSCCSSEE
T ss_pred CCcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEEE-----------ecCccceEEEecCCCCcE
Confidence 34677788875433347999999998642 33456666654321 11111 123455668999999999
Q ss_pred EEEEeCC----CCcc-ceEEEEC
Q 011680 135 YYYKIGD----GDSS-REFWFQT 152 (479)
Q Consensus 135 Y~Y~v~~----g~~~-~~~~F~T 152 (479)
|.=++-+ |+.. ..+.|.|
T Consensus 74 YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 74 YEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEEEEEEESSSCEEEEEEEEEE
T ss_pred EEEEEEEeeccCcccceEEEEEe
Confidence 9999876 6542 2777776
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.027 Score=55.05 Aligned_cols=67 Identities=16% Similarity=0.195 Sum_probs=41.6
Q ss_pred CCeEEEEEecCCCCCChHHHHHHHHHh----CC-CEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh--cCCeEEcC
Q 011680 160 APYTFGIIGDLGQTYNSLSTLKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA--YQPWIWSA 232 (479)
Q Consensus 160 ~~~~f~~~gD~~~~~~~~~~l~~~~~~----~p-D~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~ 232 (479)
...++.++||+|.. ...+.++.+. .. +.+|++||+++.+. + . .+....+..+.. ...++.+.
T Consensus 62 ~~~ri~viGDIHG~---~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~----~-s---~evl~lL~~lk~~~p~~v~llr 130 (335)
T 3icf_A 62 PDVKISVCGDTHGQ---FYDVLNLFRKFGKVGPKHTYLFNGDFVDRGS----W-S---CEVALLFYCLKILHPNNFFLNR 130 (335)
T ss_dssp TTCEEEEECCCTTC---HHHHHHHHHHHCCCBTTEEEEECSCCSSSST----T-H---HHHHHHHHHHHHHCTTTEEECC
T ss_pred cCceEEEEecCCCC---HHHHHHHHHHcCCCCCCcEEEEeCCccCCCc----C-h---HHHHHHHHHHhhhCCCcEEEec
Confidence 35799999999865 3344444443 22 46999999998765 1 1 112223333322 23489999
Q ss_pred CCccc
Q 011680 233 GNHEI 237 (479)
Q Consensus 233 GNHD~ 237 (479)
||||.
T Consensus 131 GNHE~ 135 (335)
T 3icf_A 131 GNHES 135 (335)
T ss_dssp CTTSS
T ss_pred Cchhh
Confidence 99995
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.71 E-value=0.026 Score=46.64 Aligned_cols=84 Identities=25% Similarity=0.470 Sum_probs=50.6
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC--CCcc----EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE--LGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~--~~~~----~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+|..+.+.... .+++.|+|..... .... .|+|...... ..... . ........++|++|+|+|
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~~~~~-~---~~~~~~~~~~i~~L~p~t 88 (132)
T 1x5h_A 21 APQNLSLEVRN--SKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTE-T---LVSGTQLSQLIEGLDRGT 88 (132)
T ss_dssp CCEEEEEECCS--SSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEEC-C---BCCTTCCEEEEECCCSSC
T ss_pred CCeeeEEEeCC--CCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------CccEE-E---EeCCCccEEEeCCCCCCC
Confidence 57777776433 4699999998763 2223 3444433210 00000 0 012334567899999999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 011680 134 KYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
.|.++|.. |..+....|+|.+.
T Consensus 89 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 89 EYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 99999875 33455678999773
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.044 Score=48.09 Aligned_cols=85 Identities=16% Similarity=0.204 Sum_probs=50.4
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
+.+|..+.+.... .+++.|+|...... ..-.|+|....+...... .. .+-...++|+||+|+|.|.
T Consensus 95 p~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~ 161 (186)
T 1qr4_A 95 VGSPKGISFSDIT--ENSATVSWTPPRSRVDSYRVSYVPITGGTPNVV-----TV------DGSKTRTKLVKLVPGVDYN 161 (186)
T ss_dssp CCCCSCEEEESCC--SSCEEEEECCCSSCCSEEEEEEEETTCCCCEEE-----EE------ETTCCEEEECSCCSSCEEE
T ss_pred CCCCCccEEEEeC--CCEEEEEEECCCCcccEEEEEEEeCCCCCceEE-----Ec------CCCcCEEEEcCCCCCCEEE
Confidence 3567777776433 36999999876432 334677776543211111 11 1122457899999999999
Q ss_pred EEeCC----CCc-cceEEEECCCC
Q 011680 137 YKIGD----GDS-SREFWFQTPPK 155 (479)
Q Consensus 137 Y~v~~----g~~-~~~~~F~T~p~ 155 (479)
++|.. |.+ .....|+|.|.
T Consensus 162 ~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 162 VNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp EEEEEEETTEECCCEEEEEEC---
T ss_pred EEEEEEcCCCcCcCEEEEEEecCC
Confidence 99874 322 23667888874
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.59 E-value=0.091 Score=48.03 Aligned_cols=97 Identities=15% Similarity=0.204 Sum_probs=57.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC-CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~-~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..+.+.... .+++.|+|..... ...-.|+|....+....... . ......++|++|+|+|.|.+
T Consensus 7 ~~P~~l~~~~~~--~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~-----~------~~~~~~~~i~~L~p~t~Y~~ 73 (234)
T 3f7q_A 7 GAPQNPNAKAAG--SRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHL-----L------DSKVPSVELTNLYPYCDYEM 73 (234)
T ss_dssp CCCEEEEEEECS--SSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEE-----E------EESSSEEEECSCCTTCEEEE
T ss_pred CCCcceEEEEcC--CCEEEEEEECCCCccceEEEEEEECCCCccceEE-----E------cCCccEEEECCCCCCCEEEE
Confidence 478888877544 3699999998642 23346778765432221110 0 01123568899999999999
Q ss_pred EeCC------CCccceEEEECCCC-CCCCCCeEEEEEe
Q 011680 138 KIGD------GDSSREFWFQTPPK-IHPDAPYTFGIIG 168 (479)
Q Consensus 138 ~v~~------g~~~~~~~F~T~p~-~~~~~~~~f~~~g 168 (479)
+|.. |..+....++|.+. |.....+++..++
T Consensus 74 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~ 111 (234)
T 3f7q_A 74 KVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVS 111 (234)
T ss_dssp EEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECS
T ss_pred EEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEec
Confidence 9864 33345667888743 2222335554333
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=95.58 E-value=0.027 Score=54.26 Aligned_cols=64 Identities=20% Similarity=0.229 Sum_probs=40.4
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh--cCCeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA--YQPWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD 236 (479)
+++++||+|.. ...+.++.+. ..+-+|++||+++.+. + . .+....+..+.. ...++.+.||||
T Consensus 57 ~i~viGDIHG~---~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~----~-s---~evl~lL~~lk~~~p~~v~~lrGNHE 125 (299)
T 3e7a_A 57 PLKICGDIHGQ---YYDLLRLFEYGGFPPESNYLFLGDYVDRGK----Q-S---LETICLLLAYKIKYPENFFLLRGNHE 125 (299)
T ss_dssp SEEEECBCTTC---HHHHHHHHHHHCSTTSSCEEECSCCSSSSS----C-H---HHHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred CEEEEecCCCC---HHHHHHHHHHhCCCCCccEEeCCcccCCCC----C-c---HHHHHHHHHHHhhCCCcEEEEecCch
Confidence 58999999865 3344444433 5578999999998765 1 1 112223332222 235899999999
Q ss_pred c
Q 011680 237 I 237 (479)
Q Consensus 237 ~ 237 (479)
.
T Consensus 126 ~ 126 (299)
T 3e7a_A 126 C 126 (299)
T ss_dssp S
T ss_pred h
Confidence 6
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.57 E-value=0.033 Score=43.23 Aligned_cols=83 Identities=18% Similarity=0.216 Sum_probs=49.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC-CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~-~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|..+++..-.+ +++.|+|..+.. ...-.|+|....+.. ..... ...+-...++|+||+|||.|.++
T Consensus 4 ~P~~l~~~~~~~--~si~lsW~~p~~~i~~Y~v~y~~~~~~~-------~~~~~---~~~~~~~~~~l~~L~p~t~Y~~~ 71 (94)
T 1j8k_A 4 RPKGLAFTDVDV--DSIKIAWESPQGQVSRYRVTYSSPEDGI-------HELFP---APDGEEDTAELQGLRPGSEYTVS 71 (94)
T ss_dssp CCCCCEEEEEET--TEEEEECCCCSSCCSCEEEEEEETTTEE-------EEECC---CCCSSCCEEEECSCCCCSEEEEE
T ss_pred CCCccEEEeecC--CEEEEEEcCCCCCcceEEEEEEeCCCCC-------ceEEe---cCCCCccEEEeCCCCCCCEEEEE
Confidence 567777775443 699999976542 223467787654210 00000 01122446789999999999999
Q ss_pred eCC----CCcc-ceEEEECCC
Q 011680 139 IGD----GDSS-REFWFQTPP 154 (479)
Q Consensus 139 v~~----g~~~-~~~~F~T~p 154 (479)
|.. |.+. ....++|..
T Consensus 72 V~A~~~~g~s~p~~~~~~T~~ 92 (94)
T 1j8k_A 72 VVALHDDMESQPLIGTQSTAI 92 (94)
T ss_dssp EEECSSSCCCCCEEEEEECCC
T ss_pred EEEEcCCCcCCCEEeEEEecC
Confidence 874 3332 245566653
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=95.52 E-value=0.024 Score=55.86 Aligned_cols=64 Identities=19% Similarity=0.213 Sum_probs=40.3
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhc--CCeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY--QPWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD 236 (479)
+++++||+|.. ...+.++.+. ..+-+|++||+++.+. + . .+....+..+... -.++.+.||||
T Consensus 71 pi~ViGDIHG~---~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~----~-s---~Evl~lL~~lk~~~p~~v~llrGNHE 139 (357)
T 3ll8_A 71 PVTVCGDIHGQ---FFDLMKLFEVGGSPANTRYLFLGDYVDRGY----F-S---IECVLYLWALKILYPKTLFLLRGNHE 139 (357)
T ss_dssp SEEEECCCTTC---HHHHHHHHHHHCCTTTCCEEECSCCSSSST----T-H---HHHHHHHHHHHHHCTTTEEECCCTTS
T ss_pred cceeeccCCCC---HHHHHHHHHhcCCCCCcEEEECCCccCCCc----C-h---HHHHHHHHHhhhhcCCcEEEEeCchh
Confidence 48999999865 3334444432 5688999999998765 1 1 1122233333222 34899999999
Q ss_pred c
Q 011680 237 I 237 (479)
Q Consensus 237 ~ 237 (479)
.
T Consensus 140 ~ 140 (357)
T 3ll8_A 140 C 140 (357)
T ss_dssp S
T ss_pred h
Confidence 6
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.028 Score=45.50 Aligned_cols=71 Identities=15% Similarity=0.261 Sum_probs=42.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC---ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG---SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~---~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
.+|..+.+.... .+++.|+|......+ .-.|+|....+...... .. ...-...++|++|+|+|.|
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~-------~~---~~~~~~~~~i~~L~p~t~Y 86 (118)
T 2yrz_A 19 DTPTRLVFSALG--PTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRL-------NI---PNPAQTSVVVEDLLPNHSY 86 (118)
T ss_dssp CCCCCCEECCCB--TTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEE-------EE---SCTTCCEEEEESCCTTCEE
T ss_pred CCCCceEEEeCC--CCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEE-------Ec---CCCCcCEEEeCCCCCCCEE
Confidence 467777766433 369999998775432 23455655433111111 00 1122345788999999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
.+||..
T Consensus 87 ~~~V~A 92 (118)
T 2yrz_A 87 VFRVRA 92 (118)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.13 Score=39.95 Aligned_cols=70 Identities=14% Similarity=0.260 Sum_probs=44.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|..+.+..... +++.|+|..+... ..-.|+|....+...... ... ..-...++|++|+|+|.|.++
T Consensus 4 ~P~~l~v~~~~~--~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~~ 71 (98)
T 3teu_A 4 APTDLQVTNVTD--TSITVSWTPPSATITGYRITYTPSNGPGEPKE----LTV------PPSSTSVTITGLTPGVEYVVS 71 (98)
T ss_dssp CCEEEEEEEECS--SCEEEEEECCSSCCSEEEEEEEETTSCSCCEE----EEE------CTTCSEEEECSCCTTCEEEEE
T ss_pred CCCceEEEEecC--CEEEEEEeCCCCcccEEEEEEEECCCCCceEE----EEc------CCCcCEEEecCCCCCCEEEEE
Confidence 677787764443 6999999987432 234677875443211110 011 122345789999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 72 V~A 74 (98)
T 3teu_A 72 VYA 74 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.066 Score=43.86 Aligned_cols=86 Identities=14% Similarity=0.154 Sum_probs=50.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcC--CCCCcc----EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 60 APQQVRITQGDYDGKAVIISWVTP--NELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~--~~~~~~----~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+|..+.+.... ..+++.|+|.-. ...... .|+|........ ....... ......++|++|+|+|
T Consensus 21 ~P~~~~~~~~~-s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~----~~~~~~~-----~~~~~~~~l~~L~p~t 90 (124)
T 2dbj_A 21 APLNVTVFLNE-SSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGIS----KELLEEV-----GQNGSRARISVQVHNA 90 (124)
T ss_dssp CCEEEEEEECS-SSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEE----EEEEEEE-----ESTTSCEEEECCCSSS
T ss_pred CCcceEEEecC-CCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCc----cceEEEe-----CCCcceEEecCCCCCC
Confidence 67777776322 236999999987 322222 444432211100 0000000 1112356899999999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 011680 134 KYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
.|.+||.. |..+....++|++.
T Consensus 91 ~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 91 TCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp EEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred EEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 99999874 44566888999875
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.41 E-value=0.048 Score=44.79 Aligned_cols=88 Identities=17% Similarity=0.077 Sum_probs=50.7
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEec---CCCCcceEEeeEEEEeeeccccceEEEEEecCCC
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKL---EKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~---~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~ 130 (479)
+.+|..+.+..- ..+++.|+|.-....+ .-.|+|... ....+..+. . .. .......++|++|+
T Consensus 18 P~~P~~l~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~-~---~~----~~~~~~~~~v~~L~ 87 (124)
T 1wis_A 18 PGPPTNLGISNI--GPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIH-Q---LS----NEPDARSMEVPDLN 87 (124)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEE-E---EE----SCTTCSEEEECSCC
T ss_pred CccCCCCEEEEe--cCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEee-e---Ec----cCCCceEEEeCCCC
Confidence 347877777643 3469999996543222 246777662 222222111 0 00 01223467899999
Q ss_pred CCcEEEEEeCC----CCc--cc-eEEEECCCC
Q 011680 131 YDTKYYYKIGD----GDS--SR-EFWFQTPPK 155 (479)
Q Consensus 131 p~t~Y~Y~v~~----g~~--~~-~~~F~T~p~ 155 (479)
|+|.|.+||.. |.+ +. .-.++|.+.
T Consensus 88 p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~ 119 (124)
T 1wis_A 88 PFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQS 119 (124)
T ss_dssp TTSEECCCCEEECSSCBCCCCCCCCCEECCCS
T ss_pred CCCEEEEEEEEEECCccCCCcCCccceEcCCC
Confidence 99999999874 432 22 345788765
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.017 Score=46.91 Aligned_cols=86 Identities=17% Similarity=0.238 Sum_probs=50.2
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCcc----EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~----~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+... ..+++.|+|......... .|+|....+..... +.. ....-...+.|++|+|+|.
T Consensus 20 ~~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-------~~~--~~~~~~~~~~i~~L~p~t~ 88 (121)
T 2dlh_A 20 SAPRDVQARML--SSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNN-------WMK--HNVADSQITTIGNLVPQKT 88 (121)
T ss_dssp SCCEEEEECCC--SSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTT-------SCC--CCCSSCSEECCBSCCSSCE
T ss_pred CCCcccEEEec--CCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccc-------cEE--EecCCceEEEecCCCCCCE
Confidence 36777776543 346999999987543333 33443332211000 000 0011233568999999999
Q ss_pred EEEEeCC------CCccceEEEECCCC
Q 011680 135 YYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 135 Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
|.+||.. |..+....|+|.+.
T Consensus 89 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 89 YSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp EEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 9999864 34455778999764
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.40 E-value=0.054 Score=43.22 Aligned_cols=71 Identities=14% Similarity=0.221 Sum_probs=42.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC-c----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-S----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~-~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.+.... .+++.|+|......+ . -.|+|.......+..+. ........+++++|+|++
T Consensus 9 ~~P~~l~~~~~~--~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~----------~~~~~~~~~~v~~L~p~t 76 (110)
T 2yuw_A 9 SPPTLLTVDSVT--DTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVAN----------KDLIDKTKFTITGLPTDA 76 (110)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECC----------SSCCCSSEEEECSCCTTC
T ss_pred CCCCccEEEecc--CCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEec----------cccCccCEEEECCCCCCC
Confidence 477777776433 369999999765321 2 34566554332221110 001123356889999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
+|.|||..
T Consensus 77 ~Y~frV~A 84 (110)
T 2yuw_A 77 KIFVRVKA 84 (110)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999875
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.038 Score=56.98 Aligned_cols=66 Identities=15% Similarity=0.062 Sum_probs=41.2
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHH--hhcCCeEEcCC
Q 011680 161 PYTFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS--AAYQPWIWSAG 233 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l--~~~~P~~~v~G 233 (479)
..+++++||+|.. ...+..+.+. ..|.+|++||+++.+. + . .+....+..+ .....++.+.|
T Consensus 212 ~~~~~vigDiHG~---~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~----~-s---~e~~~~l~~l~~~~~~~~~~lrG 280 (477)
T 1wao_1 212 TEKITVCGDTHGQ---FYDLLNIFELNGLPSETNPYIFNGDFVDRGS----F-S---VEVILTLFGFKLLYPDHFHLLRG 280 (477)
T ss_dssp SCEEEEECBCTTC---HHHHHHHHHHHCCCBTTBCEEEESCCSSSST----T-H---HHHHHHHHHHHHHSTTTEEEECC
T ss_pred CcceEEEeCCCCC---HHHHHHHHHHcCCCCCcCeEEEeccccCCCc----c-h---HHHHHHHHHHHhhCCCceEeecC
Confidence 4689999999854 3344444433 2356999999998765 1 1 1122222222 22456899999
Q ss_pred Cccc
Q 011680 234 NHEI 237 (479)
Q Consensus 234 NHD~ 237 (479)
|||.
T Consensus 281 NHE~ 284 (477)
T 1wao_1 281 NHET 284 (477)
T ss_dssp TTSS
T ss_pred CccH
Confidence 9995
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=95.36 E-value=0.04 Score=49.55 Aligned_cols=88 Identities=19% Similarity=0.195 Sum_probs=52.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+.......+++.|+|....... .-.|+|....+.....+.-. ........++|++|+|+|.
T Consensus 105 ~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~ 176 (215)
T 1bqu_A 105 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTE 176 (215)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSEE
T ss_pred CCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc--------cccCccceEEeCCCCCCCE
Confidence 47888888754333479999999764322 23667766543222111000 0012234578999999999
Q ss_pred EEEEeCC------CC---ccceEEEECCC
Q 011680 135 YYYKIGD------GD---SSREFWFQTPP 154 (479)
Q Consensus 135 Y~Y~v~~------g~---~~~~~~F~T~p 154 (479)
|.+||.. |. .+....++|++
T Consensus 177 Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 177 YVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEccCCCCCccCCCCCcccccccc
Confidence 9999864 22 24466777765
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.33 E-value=0.044 Score=45.23 Aligned_cols=86 Identities=21% Similarity=0.197 Sum_probs=51.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcC--CCCCc----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 60 APQQVRITQGDYDGKAVIISWVTP--NELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~--~~~~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+|..+.+.... .+++.|+|... ..... -.|+|........... ... ........++|++|+|+|
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~~---~~~~~~~~~~i~~L~p~t 90 (134)
T 2edx_A 21 PPQKVMCVSMG--STTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRH-----VVD---GISREHSSWDLVGLEKWT 90 (134)
T ss_dssp CSEEEEEECSS--SSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCE-----EEC---CCBTTCSEEEEESCCTTC
T ss_pred CCcccEEEeCC--CCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccE-----EEE---eeCCCccEEEeCCCCCCC
Confidence 67777776433 36999999987 32222 2455554433211100 000 001233567899999999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 011680 134 KYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
.|.+||.. |..+....++|.+.
T Consensus 91 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 91 EYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp EEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred EEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 99999864 34455677888764
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.30 E-value=0.14 Score=41.65 Aligned_cols=68 Identities=22% Similarity=0.352 Sum_probs=35.9
Q ss_pred CCcEEEEEEcCCCCCcc----EEEEEecC-CCCcceEEeeEEEEeee--ccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 73 GKAVIISWVTPNELGSN----RVQYGKLE-KKYDSSAEGTVTNYTFY--KYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 73 ~~~~~i~W~t~~~~~~~----~V~y~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
.+++.|.|..+...+.+ .|+|.... ...+..+ .....+... ....+-...+++++|+|+|.|.+||..
T Consensus 16 ~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 16 DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTT-NDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp ---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEE-EEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred CCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceEC-cccccccccccccccCceeEEEeCCCCCCCEEEEEEEE
Confidence 47999999987544443 45665542 1222222 111111000 001123446789999999999999875
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.24 E-value=0.028 Score=57.83 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=40.0
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD 236 (479)
++.++||+|.. ...|.++.+. ..+-+|++||+++.+. + . .+....+..+.... .++.+.||||
T Consensus 84 pI~VIGDIHGq---~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp----~-S---~Evl~lL~aLk~~~P~~v~lLRGNHE 152 (521)
T 1aui_A 84 PVTVCGDIHGQ---FFDLMKLFEVGGSPANTRYLFLGDYVDRGY----F-S---IECVLYLWALKILYPKTLFLLRGNHE 152 (521)
T ss_dssp SEEEECCCTTC---HHHHHHHHHHHCCTTTCCEEECSCCSSSSS----C-H---HHHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred ceeeccCCCCC---HHHHHHHHHhcCCCCcceEEEcCCcCCCCC----C-H---HHHHHHHHHHhhhCCCeEEEecCCcc
Confidence 48999999865 3334444332 4588999999998765 1 1 11222333332223 4899999999
Q ss_pred c
Q 011680 237 I 237 (479)
Q Consensus 237 ~ 237 (479)
.
T Consensus 153 ~ 153 (521)
T 1aui_A 153 C 153 (521)
T ss_dssp S
T ss_pred H
Confidence 5
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.23 E-value=0.12 Score=41.30 Aligned_cols=71 Identities=14% Similarity=0.162 Sum_probs=46.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC---C----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE---L----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~---~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p 131 (479)
.+|..+.+..-....+++.|+|..+.. + -.-.|+|....+.....+... . ...+.|.+|+|
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~~----------~--~~~~~l~~L~p 76 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELS----------N--GTAHTITDAYA 76 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEES----------S--CSEEEETTCCS
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEecc----------c--CCEEEEeCCCC
Confidence 478888888643323799999998753 1 134778887654322221110 0 13568899999
Q ss_pred CcEEEEEeCC
Q 011680 132 DTKYYYKIGD 141 (479)
Q Consensus 132 ~t~Y~Y~v~~ 141 (479)
||.|..||..
T Consensus 77 ~t~Y~~~VRa 86 (109)
T 1uc6_A 77 GKEYIIQVAA 86 (109)
T ss_dssp SSCEEEEEEC
T ss_pred CCEEEEEEEE
Confidence 9999999875
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.20 E-value=0.074 Score=43.72 Aligned_cols=71 Identities=15% Similarity=0.312 Sum_probs=45.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..|.+.... .+++.|+|..+... ..-.|+|....+...... ... .+-...++|+||+|+|.|.+
T Consensus 30 ~~P~~l~v~~~t--~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~~----~~v------~~~~t~~~l~gL~P~t~Y~~ 97 (121)
T 2ocf_D 30 DVPTKLEVVAAT--PTSLLISWDAPAVTVRYYRITYGETGGNSPVQE----FTV------PGSKSTATISGLKPGVDYTI 97 (121)
T ss_dssp CSCEEEEEEEEC--SSCEEEEEECCSSCCCEEEEEEEETTTCSCBEE----EEE------ETTCCEEEECCCCTTCEEEE
T ss_pred CCCCccEEEecC--CCEEEEEEcCCCCCCcEEEEEEEECCCCCccEE----EEe------CCCcCEEEeCCCCCCCEEEE
Confidence 478888887544 36999999876422 234677876543211100 000 11134678999999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 98 ~V~A 101 (121)
T 2ocf_D 98 TVYA 101 (121)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.15 E-value=0.047 Score=44.25 Aligned_cols=73 Identities=14% Similarity=0.168 Sum_probs=40.6
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCcc----EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~----~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.........+++.|+|......... .|+|.... ..+.... . ........++|++|+|+|+
T Consensus 19 ~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~------~---~~~~~~~~~~v~~L~p~t~ 88 (121)
T 1wf5_A 19 HAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLL------A---SVDPKATSVTVKGLVPARS 88 (121)
T ss_dssp CCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEE------S---SCCTTCCEEEEESCCTTCE
T ss_pred ccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeE------c---ccCCCccEEEECCcCCCCE
Confidence 4566662222233346999999876433333 44554432 1111110 0 0112234578999999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|.+||..
T Consensus 89 Y~frV~A 95 (121)
T 1wf5_A 89 YQFRLCA 95 (121)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999875
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.028 Score=45.93 Aligned_cols=89 Identities=22% Similarity=0.320 Sum_probs=52.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC------CCccEEEEEecCCCCcc---eEEeeEEEEeeeccccceEEEEEecCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE------LGSNRVQYGKLEKKYDS---SAEGTVTNYTFYKYKSGYIHHCLVDDL 129 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~------~~~~~V~y~~~~~~~~~---~~~~~~~~~~~~~~~~~~~h~v~l~gL 129 (479)
.+|..+.+.... .+++.|+|..... ...-.|+|......... ........+ ..-...++|++|
T Consensus 16 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~L 87 (125)
T 1uen_A 16 VAPGNVRVNVVN--STLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTF------QGSKTHGMLPGL 87 (125)
T ss_dssp CCCSSCEEEEEE--TTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEE------ESSCSEEEEESC
T ss_pred CCCceeEEEecC--CcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEe------cCCccEEEeCCC
Confidence 367777776443 3599999987631 11235666655432210 000111111 122346789999
Q ss_pred CCCcEEEEEeCC----C--CccceEEEECCCC
Q 011680 130 EYDTKYYYKIGD----G--DSSREFWFQTPPK 155 (479)
Q Consensus 130 ~p~t~Y~Y~v~~----g--~~~~~~~F~T~p~ 155 (479)
+|+|.|.++|.. | ..+....|+|.+.
T Consensus 88 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 88 EPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 999999999864 3 3355678888764
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.2 Score=39.73 Aligned_cols=83 Identities=13% Similarity=0.144 Sum_probs=51.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..+.+..-. .+++.|+|.-+... ..-.|+|....+. .... . ...-...++|+||+|+|.|.+
T Consensus 9 ~~P~~l~v~~~~--~~sv~lsW~~p~~~i~~Y~i~y~~~~~~-~~~~-----~------~~~~~ts~~l~~L~p~t~Y~~ 74 (105)
T 2cum_A 9 EAPRDLEAKEVT--PRTALLTWTEPPVRPAGYLLSFHTPGGQ-TQEI-----L------LPGGITSHQLLGLFPSTSYNA 74 (105)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEECTTSC-EEEE-----E------ECSSCSEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecc--CCEEEEEEcCCCCccceEEEEEEeCCCc-eEEE-----E------ECCCccEEEECCCCCCCEEEE
Confidence 467777776433 46999999876432 2346777654321 1100 0 012234678999999999999
Q ss_pred EeCC----CCc-cceEEEECCCC
Q 011680 138 KIGD----GDS-SREFWFQTPPK 155 (479)
Q Consensus 138 ~v~~----g~~-~~~~~F~T~p~ 155 (479)
+|.. |.+ +....|+|...
T Consensus 75 ~V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 75 RLQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp EEEEEBTTBCCCCEEEEEECCCS
T ss_pred EEEEEeCCcccCCEEEEEEeCCc
Confidence 9874 322 23567888754
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.08 E-value=0.15 Score=45.41 Aligned_cols=70 Identities=11% Similarity=0.121 Sum_probs=43.1
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC--CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
+|..+.+.... .+++.|+|..... ...-.|+|....+....... .. ..-...++|++|+|+|.|.+
T Consensus 25 ~P~~l~~~~~~--~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~~ 92 (203)
T 2gee_A 25 QPTDLSFVDIT--DSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED----FV------DSSVGYYTVTGLEPGIDYDI 92 (203)
T ss_dssp CCEEEEEECCT--TTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE----EE------ETTCCEEEECSCCTTCEEEE
T ss_pred CCCccEEEecC--CCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE----Ec------CCCccEEEeCCCCCCCEEEE
Confidence 56666666433 4699999998753 12346777765533221110 00 11123568899999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 93 ~V~a 96 (203)
T 2gee_A 93 SVYT 96 (203)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.06 E-value=0.049 Score=43.61 Aligned_cols=71 Identities=15% Similarity=0.249 Sum_probs=43.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.++... .+++.|+|...... ..-.|+|.......+.... . .......+++++|+|+|
T Consensus 10 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~-~---------~~~~~~~~~v~~L~p~t 77 (111)
T 1x5y_A 10 SAPQHLTVEDVT--DTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN-K---------EPVERCGFTVKDLPTGA 77 (111)
T ss_dssp CCCEEEEEEEEC--SSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS-S---------SCBSSSEEEEECCCTTC
T ss_pred cCCCCCEEEecc--CCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEcc-c---------cCCcccEEEECCCCCCC
Confidence 477777776544 36999999976432 2235666654432221110 0 01112356789999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
.|.|||..
T Consensus 78 ~Y~frV~A 85 (111)
T 1x5y_A 78 RILFRVVG 85 (111)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999875
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=95.00 E-value=0.11 Score=40.87 Aligned_cols=70 Identities=21% Similarity=0.311 Sum_probs=43.3
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|..+.++- ...+++.|+|..+... ..-.|+|.......... .... .+-.-.++|+||+|+|.|.++
T Consensus 4 ~P~~l~v~~--~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~----~~~~------~~~~t~~~l~gL~P~t~Y~~~ 71 (98)
T 3tes_A 4 APKNLVVSE--VTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAI----NLTV------PGSERSYDLTGLKPGTEYTVS 71 (98)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCE----EEEE------ETTCSEEEECSCCTTCEEEEE
T ss_pred CCCceEEEe--cCCCeEEEEecCCcCccceEEEEEEECCCCCceE----EEEc------CCCcCEEEECCCCCCCEEEEE
Confidence 466677663 3457999999977532 23467787754211110 0011 111235789999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 72 V~A 74 (98)
T 3tes_A 72 IYG 74 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.98 E-value=0.19 Score=43.90 Aligned_cols=70 Identities=19% Similarity=0.283 Sum_probs=44.5
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.+.... .+++.|+|...... ..-.|+|.............. .....+++++|+|+|
T Consensus 7 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t 73 (197)
T 3lpw_A 7 GPPQDLKVKEVT--KTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGC 73 (197)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTC
T ss_pred CCCCCcEEEEec--CCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCC
Confidence 477778776443 36999999987421 234677776554333222110 112346889999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
.|.|+|..
T Consensus 74 ~Y~~~V~a 81 (197)
T 3lpw_A 74 SYYFRVLA 81 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999874
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.97 E-value=0.081 Score=43.54 Aligned_cols=74 Identities=16% Similarity=0.175 Sum_probs=46.3
Q ss_pred CCcEEEEEEcCCCC---CccEEEEEecCCC---CcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC-----
Q 011680 73 GKAVIISWVTPNEL---GSNRVQYGKLEKK---YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD----- 141 (479)
Q Consensus 73 ~~~~~i~W~t~~~~---~~~~V~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~----- 141 (479)
.+++.|+|...... ..-.|.|+..... ..... .. ....-...++|+||+|+|.|..+|..
T Consensus 29 stsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~----~~-----v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G 99 (120)
T 1ujt_A 29 PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQN----LD-----AKVPTERSAVLVNLKKGVTYEIKVRPYFNEF 99 (120)
T ss_dssp TTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEE----EE-----CCCTTCCEEEEESCCSSEEEEEEEEEESSSC
T ss_pred CceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEE----EE-----ecCCCcCEEEECCCCCCCEEEEEEEEECCCc
Confidence 47999999964211 1237888876531 11110 00 01122456799999999999999863
Q ss_pred -CCccceEEEECCCC
Q 011680 142 -GDSSREFWFQTPPK 155 (479)
Q Consensus 142 -g~~~~~~~F~T~p~ 155 (479)
|..|....|+|+..
T Consensus 100 ~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 100 QGMDSESKTVRTTEE 114 (120)
T ss_dssp CCCCCCCEEEEECSS
T ss_pred cCCCCCCEEEECCCC
Confidence 55566778899764
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=94.90 E-value=0.1 Score=46.74 Aligned_cols=83 Identities=18% Similarity=0.227 Sum_probs=49.3
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC-----CCccEEEEEecCC-CCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE-----LGSNRVQYGKLEK-KYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~-----~~~~~V~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+|..+.+.. ...+++.|+|..... ...-.|+|..... ....... . ........+|++|+|+|
T Consensus 118 ~P~~~~~~~--~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~-----~~~~~~~~~i~~L~p~t 185 (214)
T 2ibg_A 118 VPELLEIEE--YSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT-----I-----EGAHARSFKIAPLETAT 185 (214)
T ss_dssp CCEECCCBC--CSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE-----E-----ECTTCCEEEECSCCTTC
T ss_pred CCcccEEEE--ccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEee-----c-----cCCcceEEEeCCCCCCC
Confidence 566555443 334699999998741 1234677776543 1111110 0 01112346889999999
Q ss_pred EEEEEeCC----C--CccceEEEECCC
Q 011680 134 KYYYKIGD----G--DSSREFWFQTPP 154 (479)
Q Consensus 134 ~Y~Y~v~~----g--~~~~~~~F~T~p 154 (479)
.|.|||.. | ..+....++|..
T Consensus 186 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 186 MYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCcceEeeEecC
Confidence 99999864 3 345677888864
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.055 Score=42.33 Aligned_cols=71 Identities=14% Similarity=0.287 Sum_probs=44.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..|++.-.. .+++.|+|...... ..-.|+|....+..... . ... ++-...++|+||+|+|.|..
T Consensus 6 ~~P~~l~v~~~t--~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~---~-~~v------~~~~t~~~l~~L~p~t~Y~v 73 (97)
T 3qht_C 6 SVPTKLEVVAAT--PTSLLISWDASSSSVSYYRITYGETGGNSPVQ---E-FTV------PGSSSTATISGLSPGVDYTI 73 (97)
T ss_dssp CSSSSCEEEEEE--TTEEEEECCCCCSSCCEEEEEEEESSSCSCCE---E-EEE------ETTCCEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecC--CCEEEEEEeCCCCCCCEEEEEEEECCCCCccE---E-EEe------CCCcCEEEeCCCCCCCEEEE
Confidence 467778877544 36999999876422 23467787754321110 0 010 12234678999999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 74 ~V~A 77 (97)
T 3qht_C 74 TVYA 77 (97)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.064 Score=42.56 Aligned_cols=71 Identities=15% Similarity=0.288 Sum_probs=44.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..|++.--. .+++.|+|..+... ..-.|+|.......... . ... ..-...++|+||+|+|.
T Consensus 9 ~~P~~l~v~~~t--~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~---~-~~v------~~~~ts~~l~~L~p~t~ 76 (103)
T 3t04_D 9 SVPTKLEVVDAT--PTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ---E-FTV------PGYYSTATISGLKPGVD 76 (103)
T ss_dssp CCCCSCEEEEEE--TTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE---E-EEE------ETTCCEEEECSCCTTCC
T ss_pred CCCceeEEEecC--CCEEEEEccCCCCCCCccceEEEEEEECCCCCccE---E-EEc------CCCcCEEEeCCCCCCCE
Confidence 467778887533 36999999877521 23367887654211110 0 000 11234678999999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|..+|..
T Consensus 77 Y~~~V~A 83 (103)
T 3t04_D 77 YTITVYA 83 (103)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.80 E-value=0.04 Score=44.43 Aligned_cols=70 Identities=13% Similarity=0.121 Sum_probs=41.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCC-cceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKY-DSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.+.... .+++.|+|....... .-.|+|....... +.... . ......+++++|+|+|
T Consensus 17 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~------~-----~~~~~~~~i~~L~p~t 83 (117)
T 1uem_A 17 GPPSKPQVTDVT--KNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA------N-----HVKTTLYTVRGLRPNT 83 (117)
T ss_dssp BCCCCCEEEEEC--SSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE------E-----EECSSEEEECSCCTTC
T ss_pred cCCCCCEEEEec--CCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcc------c-----ccCcCEEEECCCCCCC
Confidence 367677776433 369999998764222 2356665542111 11110 0 0012256889999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
.|.|||..
T Consensus 84 ~Y~frV~A 91 (117)
T 1uem_A 84 IYLFMVRA 91 (117)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999875
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=94.74 E-value=0.13 Score=46.08 Aligned_cols=85 Identities=14% Similarity=0.203 Sum_probs=54.3
Q ss_pred CCCCceEEEeecC--CCCCcEEEEEEcCCCCC--------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEec
Q 011680 58 HNAPQQVRITQGD--YDGKAVIISWVTPNELG--------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVD 127 (479)
Q Consensus 58 ~~~P~~v~lt~~~--~~~~~~~i~W~t~~~~~--------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~ 127 (479)
+.+|..|.+.... ...+++.|+|..+.... .-.|+|....+...... .. .....+.|.
T Consensus 103 p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~------~~------~~~~~~~l~ 170 (210)
T 3n06_B 103 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIH------FA------GQQTEFKIL 170 (210)
T ss_dssp CCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEE------EE------ETCSEEEEC
T ss_pred cCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEE------ec------cCceEEEEe
Confidence 3578888887643 23469999999875322 23566766543222111 00 112356899
Q ss_pred CCCCCcEEEEEeCC----C---CccceEEEECCC
Q 011680 128 DLEYDTKYYYKIGD----G---DSSREFWFQTPP 154 (479)
Q Consensus 128 gL~p~t~Y~Y~v~~----g---~~~~~~~F~T~p 154 (479)
+|+|+|.|..||.. | ..|+...|+|+.
T Consensus 171 ~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 171 SLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp CCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred ccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 99999999999864 3 345678899965
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.68 E-value=0.07 Score=43.43 Aligned_cols=70 Identities=16% Similarity=0.216 Sum_probs=44.6
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.+..... +++.|+|..+... ..-.|+|.......+..+.. ......+++++|+|++
T Consensus 19 ~~P~~l~~~~~~~--~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~-----------~~~~~~~~v~~L~p~t 85 (120)
T 2yux_A 19 GPPQIVKIEDVWG--ENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE-----------HYHRTSATITELVIGN 85 (120)
T ss_dssp CCCSCEEEEEEET--TEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES-----------SCCSSCCEECCCCSSE
T ss_pred CcCCCCEEEEecC--CEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee-----------cCCcCEEEECCCCCCC
Confidence 4677777764333 5999999876422 23467787655433322211 0112345789999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
.|.|||..
T Consensus 86 ~Y~frV~A 93 (120)
T 2yux_A 86 EYYFRVFS 93 (120)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEE
Confidence 99999986
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=94.64 E-value=0.099 Score=49.83 Aligned_cols=88 Identities=19% Similarity=0.195 Sum_probs=53.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+...+...+++.|+|..+.... .-.|+|.......+..+.-. ........++|++|+|+|.
T Consensus 201 ~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~--------~~~~~~~~~~l~~L~p~t~ 272 (303)
T 1i1r_A 201 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTE 272 (303)
T ss_dssp CCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCTTCE
T ss_pred CCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc--------cCCCceeEEEeCCCCCCCE
Confidence 47888887654333479999999765321 23677776643222211100 0012234578999999999
Q ss_pred EEEEeCC------CC---ccceEEEECCC
Q 011680 135 YYYKIGD------GD---SSREFWFQTPP 154 (479)
Q Consensus 135 Y~Y~v~~------g~---~~~~~~F~T~p 154 (479)
|.+||.. |. ++....|+|+.
T Consensus 273 Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 273 YVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 9999874 32 24577888865
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.60 E-value=0.3 Score=45.92 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=57.5
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCC-CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~-~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
..+|..+.+.... .+++.|+|..... ...-.|+|....+...... .. ......+.|++|+|+|.|.
T Consensus 113 ~~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~ 179 (290)
T 3r8q_A 113 VSPPRRARVTDAT--ETTITISWRTKTETITGFQVDAVPANGQTPIQR-----TI------KPDVRSYTITGLQPGTDYK 179 (290)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSCCCCEEEEEEEESSSCCCEEE-----EE------CTTCSEEEECSCCTTCEEE
T ss_pred CCCCceeEEEEcC--CCeEEEEEeCCCCcccEEEEEEEECCCCcceEE-----ec------CCCccEEEECCCCCCCEEE
Confidence 3578888877444 3699999998753 2345677766543221110 11 1122346899999999999
Q ss_pred EEeCC----CCcc-ceEEEECCCCCCCCCCeEEEEEec
Q 011680 137 YKIGD----GDSS-REFWFQTPPKIHPDAPYTFGIIGD 169 (479)
Q Consensus 137 Y~v~~----g~~~-~~~~F~T~p~~~~~~~~~f~~~gD 169 (479)
++|.. |.+. ....++|.|.+ ...+++..+++
T Consensus 180 ~~V~A~n~~g~s~~~~~~~~t~p~~--P~~l~~~~~~~ 215 (290)
T 3r8q_A 180 IYLYTLNDNARSSPVVIDASTAIDA--PSNLRFLATTP 215 (290)
T ss_dssp EEEEEEETTEECCCEEEEEECCCCC--CEEEEEEEEET
T ss_pred EEEEEEeCCcccCCEEEEecCCCCC--CCccEEEeeCC
Confidence 99874 3222 24566777642 23455554443
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=94.50 E-value=0.13 Score=45.97 Aligned_cols=87 Identities=24% Similarity=0.412 Sum_probs=52.4
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..+.+...+...+++.|+|....... .-.|+|........... ..... .+-...++|++|+|+|.|
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~------~~~~~~~~i~~L~p~t~Y 179 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDW--VIEPV------VGNRLTHQIQELTLDTPY 179 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGS--EEEEE------ESSCSEEEECCCCTTCEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCce--EEEEe------cCCeeEEEEcCCCCCCEE
Confidence 7888888765432369999999765322 23666765543221100 00000 112335689999999999
Q ss_pred EEEeCC------CCccceEEEECCC
Q 011680 136 YYKIGD------GDSSREFWFQTPP 154 (479)
Q Consensus 136 ~Y~v~~------g~~~~~~~F~T~p 154 (479)
.++|.. |..+....|+|..
T Consensus 180 ~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 180 YFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp EEEEEEEETTEECCCCCCEEEECC-
T ss_pred EEEEEEEcCCccCCCCCCEEccCcc
Confidence 999874 4445566777754
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.49 E-value=0.29 Score=45.74 Aligned_cols=97 Identities=14% Similarity=0.234 Sum_probs=58.2
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCC-CCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPN-ELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~-~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..|.+..... +++.|+|.-.. ....-.|+|.......... .... ......+.|++|+|+|.|.+
T Consensus 16 ~~P~~l~~~~~~~--~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y~~ 83 (283)
T 1tdq_A 16 DGPTQILVRDVSD--TVAFVEWTPPRAKVDFILLKYGLVGGEGGKT----TFRL------QPPLSQYSVQALRPGSRYEV 83 (283)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSSCCSEEEEEEEESSSSCCCE----EEEE------CTTCSEEEECSCCTTCEEEE
T ss_pred CCCcEEEEEecCC--CeEEEEEECCCCceeEEEEEEEEecCCCCcE----EEEe------CCCCCEEEecCCCCCCEEEE
Confidence 4788888775443 69999999875 2334578886543221110 0111 12234568899999999999
Q ss_pred EeCC----CCc-cceEEEECCCCCCCCCCeEEEEEec
Q 011680 138 KIGD----GDS-SREFWFQTPPKIHPDAPYTFGIIGD 169 (479)
Q Consensus 138 ~v~~----g~~-~~~~~F~T~p~~~~~~~~~f~~~gD 169 (479)
+|.. |.+ +....|.|+|.+ ...+++..+++
T Consensus 84 ~V~a~~~~g~s~~~~~~~~t~p~~--P~~l~~~~~~~ 118 (283)
T 1tdq_A 84 SISAVRGTNESDASSTQFTTEIDA--PKNLRVGSRTA 118 (283)
T ss_dssp EEEEEETTEECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EEEEECCCCCCCCeeEEEECCCCC--CCceEEEecCC
Confidence 9875 222 235568887652 23455544444
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=94.47 E-value=0.1 Score=54.47 Aligned_cols=83 Identities=24% Similarity=0.318 Sum_probs=49.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+. ....+++.|+|..+.... .-.|+|......... ... ..-...++|+||+|+|.
T Consensus 442 ~~Ps~~~~~--~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~------~~v------~~~~ts~~l~gL~P~T~ 507 (536)
T 3fl7_A 442 TEPPKVRLE--GRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSY------NVR------RTEGFSVTLDDLAPDTT 507 (536)
T ss_dssp CCCCEEEEE--ECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCC------EEE------EESSSEEECCSCCSSCE
T ss_pred cCCCCCcee--eccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceE------EEE------cCCCCEEEECCCCCCCE
Confidence 356666653 223479999999764322 236777665432100 011 11123568999999999
Q ss_pred EEEEeCC------CCccceEEEECCCC
Q 011680 135 YYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 135 Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
|.++|.. |..|....|+|++.
T Consensus 508 Y~frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 508 YLVQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EEEEEEEECC---CEECCCEEEECCC-
T ss_pred EEEEEEEEcCCcccCCCCCEEEEeCCC
Confidence 9999864 34466888999875
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.44 E-value=0.51 Score=43.99 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=56.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..+.+.... .+++.|+|...... ..-.|+|....+...... ... ...+-...+.|++|+|+|.|.+
T Consensus 106 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~~---~~~~~~~~~~i~~L~p~t~Y~~ 175 (283)
T 1tdq_A 106 DAPKNLRVGSRT--ATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEV-----LVP---KGIGPTTKTTLTDLVPGTEYGV 175 (283)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTCCCCEEE-----EEE---CCSSSEEEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecC--CCeEEEEecCCCCCccEEEEEEEeCCCCcceEE-----ECC---CCCcccceEEEecCCCCCEEEE
Confidence 467777776544 36999999987432 345677776543222111 100 0001156678999999999999
Q ss_pred EeCC----CCcc-ceEEEECCCCCCCCCCeEEEEEec
Q 011680 138 KIGD----GDSS-REFWFQTPPKIHPDAPYTFGIIGD 169 (479)
Q Consensus 138 ~v~~----g~~~-~~~~F~T~p~~~~~~~~~f~~~gD 169 (479)
+|.. |.+. ....+.|.|. ....+++..+++
T Consensus 176 ~V~A~n~~g~s~~~~~~~~t~~~--~P~~l~~~~~~~ 210 (283)
T 1tdq_A 176 GISAVMNSKQSIPATMNARTELD--SPRDLMVTASSE 210 (283)
T ss_dssp EEEEEETTEECCCEEEEEECCCC--CCEEEEEEEECS
T ss_pred EEEEEeCCCCCcceEEEecCCCC--CCCccEEeEecC
Confidence 9875 2222 2455666654 223345444443
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.42 E-value=0.24 Score=43.15 Aligned_cols=91 Identities=13% Similarity=0.185 Sum_probs=54.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..|.+.... .+++.|+|...... ..-.|+|....+. ... ... ..-...+.|++|+|+|.|.+
T Consensus 8 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~-~~~-----~~~------~~~~~~~~i~~L~p~t~Y~~ 73 (186)
T 1qr4_A 8 DNPKDLEVSDPT--ETTLSLRWRRPVAKFDRYRLTYVSPSGK-KNE-----MEI------PVDSTSFILRGLDAGTEYTI 73 (186)
T ss_dssp CCCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECTTCC-EEE-----EEE------CTTCSEEEEESCCSSCEEEE
T ss_pred cCCCceEEEecC--CCEEEEEEeCCCCCccEEEEEEEeCCCC-eeE-----EEC------CCCCCEEEECCCCCCCEEEE
Confidence 478888877544 36999999976432 3446777643221 100 011 11123468899999999999
Q ss_pred EeCC----CCcc-ceEEEECCCCCCCCCCeEEE
Q 011680 138 KIGD----GDSS-REFWFQTPPKIHPDAPYTFG 165 (479)
Q Consensus 138 ~v~~----g~~~-~~~~F~T~p~~~~~~~~~f~ 165 (479)
+|.. |.+. ....++|+|.+ ...+++.
T Consensus 74 ~V~a~~~~~~s~~~~~~~~t~p~~--P~~l~~~ 104 (186)
T 1qr4_A 74 SLVAEKGRHKSKPTTIKGSTVVGS--PKGISFS 104 (186)
T ss_dssp EEEEESSSCBCCCEEEEEECCCCC--CSCEEEE
T ss_pred EEEEEcCCccCCCEEEEEECCCCC--CCccEEE
Confidence 9874 2222 25677887642 2345543
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.41 E-value=0.076 Score=43.01 Aligned_cols=59 Identities=19% Similarity=0.211 Sum_probs=36.3
Q ss_pred CCcEEEEEEcCCC-----CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 73 GKAVIISWVTPNE-----LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 73 ~~~~~i~W~t~~~-----~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
.+++.|+|..... ...-.|+|....+..+..+... ....-.++++||+|||.|.|||..
T Consensus 24 ~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~----------~~~~~~~~v~~L~p~t~Y~frV~A 87 (112)
T 1bpv_A 24 RHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS----------NILENEFTVSGLTEDAAYEFRVIA 87 (112)
T ss_dssp TTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS----------CCCSSEEEECSCCSSCCEEEEEEE
T ss_pred CCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc----------cCccCEEEECCCCCCCEEEEEEEE
Confidence 3699999995421 2235788877654333221100 011124578999999999999875
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.34 E-value=0.061 Score=44.14 Aligned_cols=84 Identities=19% Similarity=0.242 Sum_probs=47.3
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCc----cEEEEEecCCC--CcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKK--YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~----~~V~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..+.+.... .+++.|+|.-...... -.|+|...... .+... .... ..... .+.+|+|+
T Consensus 18 ~~P~~~~~~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~----~~~~-----~~~~~--~i~~L~p~ 84 (127)
T 1uey_A 18 NPPFDLELTDQL--DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQ----TEVS-----GTQTT--AQLNLSPY 84 (127)
T ss_dssp CCCEEEEEECCS--SSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEE----EEEE-----SSCCE--EEECCCTT
T ss_pred cCCCCcEEEEcc--CCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEE----eeeC-----CCceE--EEecCCCC
Confidence 478888776433 3699999996543333 34556543311 11111 0110 01112 36699999
Q ss_pred cEEEEEeCC----CC--ccce-EEEECCCC
Q 011680 133 TKYYYKIGD----GD--SSRE-FWFQTPPK 155 (479)
Q Consensus 133 t~Y~Y~v~~----g~--~~~~-~~F~T~p~ 155 (479)
|.|.+||.. |. .+.. ..|+|.+.
T Consensus 85 t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 85 VNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred CEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 999999874 32 2333 46888764
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=94.21 E-value=0.077 Score=47.42 Aligned_cols=71 Identities=13% Similarity=0.196 Sum_probs=43.5
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..+++..-.. +++.|+|..+... ..-.|.|........... ... +.-..+++|+||+|+|+|.+
T Consensus 105 ~~P~~l~v~~~t~--~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~----~~v------~~~~t~~~l~gL~p~t~Y~~ 172 (195)
T 2qbw_A 105 SVPTNLEVVAATP--TSLLISWDASYYGVSYYRITYGETGGNSPVQE----FTV------PYSSSTATISGLKPGVDYTI 172 (195)
T ss_dssp CSSCCCEEEEEET--TEEEEECCCCCSSCSEEEEEEEETTCCSCCEE----EEE------ETTCSEEEECSCCTTCEEEE
T ss_pred CCCcccEEEeCCC--CEEEEEEeCCCCCccEEEEEEEECCCCCcceE----EEe------CCCCCEEEeCCCCCCCEEEE
Confidence 4677777764443 5999999776422 234677866543211100 000 11234679999999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 173 ~V~A 176 (195)
T 2qbw_A 173 TVYA 176 (195)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.18 E-value=0.14 Score=41.42 Aligned_cols=68 Identities=16% Similarity=0.364 Sum_probs=42.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+++.... +++.|+|.-+.... .-.|+|..... .... ... ..-...++|++|+|+|.
T Consensus 19 ~~P~~l~~~~~~---~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~-----~~~------~~~~~~~~l~~L~p~t~ 83 (116)
T 2edb_A 19 DQPSSLHVRPQT---NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAET-----VRV------DSKQRYYSIERLESSSH 83 (116)
T ss_dssp CCCSCEEEEECS---SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEE-----EEE------ETTCCEEEECSCCSSSB
T ss_pred CCCCCeEEEECC---CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEE-----EEe------CCCeeEEEeCCCCCCCE
Confidence 378888887543 69999999775332 23667764221 1100 011 11234568999999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|.++|..
T Consensus 84 Y~~~V~A 90 (116)
T 2edb_A 84 YVISLKA 90 (116)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999874
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.09 E-value=0.28 Score=43.48 Aligned_cols=84 Identities=18% Similarity=0.181 Sum_probs=48.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCC-CcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKK-YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.+.. ..+++.|+|....... .-.|+|...... .+...... .. +....+.+ +|+|+|
T Consensus 7 ~~P~~~~~~~---~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---~~------~~~~~~~~-~L~p~t 73 (205)
T 1cfb_A 7 NAPKLTGITC---QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK---VP------NTDSSFVV-QMSPWA 73 (205)
T ss_dssp CCCEEEEEEE---CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE---EE------TTCSEEEE-ECCSSE
T ss_pred CCCCCcEEEe---cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeec---cC------CCceEEEE-eCCCCC
Confidence 4788888887 3479999999764222 236777654321 12111111 00 11113345 999999
Q ss_pred EEEEEeCC----C--Ccc-ceEEEECCCC
Q 011680 134 KYYYKIGD----G--DSS-REFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~----g--~~~-~~~~F~T~p~ 155 (479)
.|.+||.. | ..+ ....++|.+.
T Consensus 74 ~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 74 NYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 99999864 2 223 3456777654
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=93.88 E-value=0.22 Score=44.59 Aligned_cols=87 Identities=11% Similarity=0.090 Sum_probs=52.0
Q ss_pred CCCCceEEEeecCC----CCCcEEEEEEcCCCCC----ccEEEEE-ecCCCCcceEEeeEEEEeeeccccceEEEEEecC
Q 011680 58 HNAPQQVRITQGDY----DGKAVIISWVTPNELG----SNRVQYG-KLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (479)
Q Consensus 58 ~~~P~~v~lt~~~~----~~~~~~i~W~t~~~~~----~~~V~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~g 128 (479)
+.+|..+.+....+ ..+++.|+|..+...+ .-.|+|. ...+..+..+. .. ......+.|.+
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~----~~------~~~~~~~~l~~ 178 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVF----HL------PSSKDQFELCG 178 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEE----EE------ESCEEEEEECC
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEe----cc------cCcceEEEEcC
Confidence 35787777665321 2468999999764322 3467777 44332222211 00 11235678999
Q ss_pred CCCCcEEEEEeCC------C---CccceEEEECCC
Q 011680 129 LEYDTKYYYKIGD------G---DSSREFWFQTPP 154 (479)
Q Consensus 129 L~p~t~Y~Y~v~~------g---~~~~~~~F~T~p 154 (479)
|+|+|+|..||.. | ..|....|+|+.
T Consensus 179 L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 179 LHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 9999999999863 3 235567788865
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=93.87 E-value=0.34 Score=44.49 Aligned_cols=86 Identities=17% Similarity=0.235 Sum_probs=54.6
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC------ccEEEEEecCC-CCcceEEeeEEEEeeeccccceEEEEEecCCC
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG------SNRVQYGKLEK-KYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~------~~~V~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~ 130 (479)
+.+|..|.+.....+ .++.|+|..+.... .-.|+|..... ..+..... ......+.+.+|+
T Consensus 113 PdPP~nLtv~~~~~~-~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~~-----------~~t~~~i~l~~L~ 180 (223)
T 3up1_A 113 PEAPFDLSVVYREGA-NDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNL-----------SSTKLTLLQRKLQ 180 (223)
T ss_dssp CCCCEEEEEEEETTT-TEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEEE-----------SSSEEEEEGGGSC
T ss_pred cCCCcceEEEEEcCC-CCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEEe-----------cCceeEEeccccC
Confidence 458888888876544 57899999874221 24677776532 22221110 1122345688999
Q ss_pred CCcEEEEEeCC-------C---CccceEEEECCCC
Q 011680 131 YDTKYYYKIGD-------G---DSSREFWFQTPPK 155 (479)
Q Consensus 131 p~t~Y~Y~v~~-------g---~~~~~~~F~T~p~ 155 (479)
|+|.|..||.. | .+|....|+|++.
T Consensus 181 Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 181 PAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp TTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred CCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 99999999852 2 2356788999875
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.80 E-value=0.17 Score=41.67 Aligned_cols=68 Identities=12% Similarity=0.300 Sum_probs=42.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+++.... +++.|+|..+.... .-.|+|... .. ... ... ...-...++|++|+|+|.
T Consensus 29 ~~P~~l~~~~~~---~sv~l~W~~P~~~~g~i~~Y~v~y~~~-~~-~~~----~~~------~~~~~~~~~i~~L~p~t~ 93 (126)
T 1x5i_A 29 EVPSSLHVRPLV---TSIVVSWTPPENQNIVVRGYAIGYGIG-SP-HAQ----TIK------VDYKQRYYTIENLDPSSH 93 (126)
T ss_dssp CSCSEEEEEEET---TEEEEEEECCSCTTBCCCEEEEEECSS-CG-GGE----EEE------CCTTCCEEEECSCCSSCE
T ss_pred CCCCeeEEEecC---CEEEEEEcCCCCCCCCEeEEEEEEEcC-CC-Cce----EEE------eCCCeeEEEEeCCCCCCE
Confidence 478888888653 69999999875332 235666531 11 100 001 112334578999999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|.++|..
T Consensus 94 Y~~~V~A 100 (126)
T 1x5i_A 94 YVITLKA 100 (126)
T ss_dssp ECCEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.78 E-value=0.2 Score=44.38 Aligned_cols=85 Identities=16% Similarity=0.246 Sum_probs=49.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCC--CCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPN--ELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~--~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.|.+|.++.-....+++.|+|..+. ....-.|+|........... ... .+-...+.|+||+|+|.|.+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~ 71 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE----ATI------PGHLNSYTIKGLKPGVVYEG 71 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEE----EEE------CTTCCEEEECSCCTTEEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEE----Eec------CCCccEEEecCCCCCCEEEE
Confidence 4667766643222479999999863 22344677876543211110 011 11123678999999999999
Q ss_pred EeCC----CCcc-ceEEEECCC
Q 011680 138 KIGD----GDSS-REFWFQTPP 154 (479)
Q Consensus 138 ~v~~----g~~~-~~~~F~T~p 154 (479)
+|.. |... ....|+|.+
T Consensus 72 ~V~a~n~~G~~~~~~~~~~t~~ 93 (201)
T 2ha1_A 72 QLISIQQYGHQEVTRFDFTTTS 93 (201)
T ss_dssp EEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEecccccCceeEEEecCC
Confidence 9874 3322 144566543
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=93.73 E-value=0.21 Score=44.45 Aligned_cols=70 Identities=19% Similarity=0.316 Sum_probs=44.6
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC--CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
+|..+.+..... +++.|+|..+.. ...-.|+|....+..... .... ..-...++|+||+|+|.|.+
T Consensus 116 ~P~~l~~~~~~~--~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y~~ 183 (203)
T 2gee_A 116 PPTDLRFTNIGP--DTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVA----ELSI------SPSDNAVVLTNLLPGTEYVV 183 (203)
T ss_dssp CCEEEEEEEEET--TEEEEEEECCSSCCCSEEEEEEEETTCGGGCE----EEEE------CTTCCEEEECSCCTTCEEEE
T ss_pred CCCceEEEEcCC--CEEEEEEcCCCCCCccEEEEEEEECCCCCccE----EEEc------CCCcCEEEECCCCCCCEEEE
Confidence 688887765443 699999998742 234567787644321111 0010 12234578899999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 184 ~V~A 187 (203)
T 2gee_A 184 SVSS 187 (203)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.61 E-value=0.04 Score=43.85 Aligned_cols=71 Identities=17% Similarity=0.266 Sum_probs=44.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..|++..-. .+++.|+|...... ..-.|+|.......... . .. ..+-...++|+||+|+|.|.+
T Consensus 9 ~~P~~l~v~~~t--~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~-~~------v~~~~~~~~l~~L~p~t~Y~~ 76 (105)
T 2ekj_A 9 SPPSNLALASET--PDSLQVSWTPPLGRVLHYWLTYAPASGLGPEK---S-VS------VPGARSHVTLPDLQAATKYRV 76 (105)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECCSSCCSBBCBBCCCTTSCSCCC---C-BC------CBTTSSEEEECSCCSSCCCBC
T ss_pred CCCCceEEEeCC--CCEEEEEEeCCCCcceEEEEEEEECCCCCccE---E-EE------eCCCcCEEEeCCCCCCCEEEE
Confidence 478888887544 36999999987522 23456666543211100 0 00 012234578999999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 77 ~V~A 80 (105)
T 2ekj_A 77 LVSA 80 (105)
T ss_dssp BBCB
T ss_pred EEEE
Confidence 9875
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.57 E-value=0.22 Score=40.11 Aligned_cols=71 Identities=13% Similarity=0.201 Sum_probs=42.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+.... .+++.|+|....... .-.|+|.......... ... .......++|++|+|+|.
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~------~~~~~~~~~i~~L~p~t~ 86 (119)
T 1wfn_A 19 GPVGHLSFSEIL--DTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRV----THY------LPNVTLEYRVTGLTALTT 86 (119)
T ss_dssp CCCSCCEEESCC--SSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCC----CEE------ECSSCCEEEEESCCTTCE
T ss_pred CCCCceEEEECC--CCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceE----EEE------eCCCceEEEEcCCCCCCE
Confidence 357677766433 369999998765322 2356666544221100 001 012234578899999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|.+||..
T Consensus 87 Y~~~V~A 93 (119)
T 1wfn_A 87 YTIEVAA 93 (119)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999874
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=93.56 E-value=0.21 Score=46.84 Aligned_cols=80 Identities=19% Similarity=0.304 Sum_probs=47.6
Q ss_pred CceEEEeecCCCCCcEEEEEEcCC------CCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 61 PQQVRITQGDYDGKAVIISWVTPN------ELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 61 P~~v~lt~~~~~~~~~~i~W~t~~------~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
|.++.+.... .+++.|+|.... ....-.|+|....+.. .. ... ..-...++|++|+|||.
T Consensus 200 ~p~~~~~~~~--~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~-~~-----~~~------~~~~~~~~~~~L~p~t~ 265 (290)
T 3l5i_A 200 GPTVRTKKVG--KNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE-TA-----VNV------DSSHTEYTLSSLTSDTL 265 (290)
T ss_dssp CCCEEEEEEC--SSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC-EE-----EEE------ETTCSEEEECSCCTTCE
T ss_pred CCeeeEeecc--CCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe-EE-----EEe------CCCceEEEeCCCCCCCE
Confidence 3356654333 369999998321 1223467777654321 11 011 12233568999999999
Q ss_pred EEEEeCC----C-CccceEEEECCC
Q 011680 135 YYYKIGD----G-DSSREFWFQTPP 154 (479)
Q Consensus 135 Y~Y~v~~----g-~~~~~~~F~T~p 154 (479)
|.++|.. | ..+....|+|+|
T Consensus 266 Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 266 YMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEEEEEEETTEEEECCCEEEECCC
T ss_pred EEEEEEEEeCCCCCCCCceEeecCC
Confidence 9999864 3 334578899975
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=93.55 E-value=0.21 Score=48.66 Aligned_cols=73 Identities=14% Similarity=0.254 Sum_probs=45.6
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCC--CCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPN--ELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~--~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
.+|..|.+....+. .++.|+|.... ....-.|+|....+........ .. ......++|++|+|+|.|.
T Consensus 3 ~~P~~l~~~~~~~~-~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~------~~~~~~~~i~~L~p~t~Y~ 72 (368)
T 1fnf_A 3 SPPTNLHLEANPDT-GVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---VV------HADQSSCTFDNLSPGLEYN 72 (368)
T ss_dssp CCCEEEEEEECSSS-SCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEE---EE------CTTCCEEECCCCCTTSCEE
T ss_pred CCCcceEEEecCCC-cEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEE---Ee------cCCcCEEEECCCCCCCEEE
Confidence 37888888754432 36999999864 2234577777655422111110 11 1223467899999999999
Q ss_pred EEeCC
Q 011680 137 YKIGD 141 (479)
Q Consensus 137 Y~v~~ 141 (479)
|+|..
T Consensus 73 ~~V~a 77 (368)
T 1fnf_A 73 VSVYT 77 (368)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99874
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=93.48 E-value=0.34 Score=43.89 Aligned_cols=79 Identities=19% Similarity=0.296 Sum_probs=48.5
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCC-CcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKK-YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..++.+--. .+++.++|..+.. ....-.|..-.+. ....+.+..++ .+++||+|+|.|-|
T Consensus 152 ~Pp~NL~At~VT--~tSVtLsW~aP~~-~~GI~gY~ly~~g~~v~~v~~~~ts-------------yt~~gLk~~TeYsF 215 (238)
T 2w1n_A 152 NPVRDFKASEIN--KKNVTVTWTEPET-TEGLEGYILYKDGKKVAEIGKDETS-------------YTFKKLNRHTIYNF 215 (238)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSC-CTTEEEEEEEETTEEEEEEETTCCE-------------EEECSCCTTCEEEE
T ss_pred CCCCceEEEEcc--CCeEEEEecCCCC-CCCceeEEEEeCCceeEEeeccceE-------------EEecCCCCCCEEEE
Confidence 578888887544 4699999999863 2334455443322 11122222223 36799999999999
Q ss_pred EeCC----CC--ccceEEEECC
Q 011680 138 KIGD----GD--SSREFWFQTP 153 (479)
Q Consensus 138 ~v~~----g~--~~~~~~F~T~ 153 (479)
+|.. |. +...-.+||.
T Consensus 216 ~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 216 KIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEEEEETTSCBCCCEEEEEECC
T ss_pred EEEEEeCCCCccccCcEEEEec
Confidence 9874 43 2345566664
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=93.40 E-value=0.35 Score=43.00 Aligned_cols=71 Identities=14% Similarity=0.236 Sum_probs=42.2
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+.+|..+.+.... .+++.|+|..+... ..-.|+|....+ ..... ... ......++|++|+|+|
T Consensus 110 P~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~----~~~------~~~~~~~~i~~L~p~t 176 (209)
T 2vkw_A 110 PSAPKLEGQMGED--GNSIKVNLIKQDDGGSPIRHYLVRYRALSS-EWKPE----IRL------PSGSDHVMLKSLDWNA 176 (209)
T ss_dssp CCCCEEEEEECTT--SSCEEEEEECCCCTTSCCCEEEEEEEETTS-CCCCC----EEE------CTTCCEEEECSCCTTC
T ss_pred CCCCccccccccc--CCeEEEEEECcccCCCCCceEEEEEECCCC-CCcee----eec------CCCccEEEecCCCCCC
Confidence 3467666554333 46999999986322 234677776222 11110 010 1122346899999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
.|.+||..
T Consensus 177 ~Y~~~V~A 184 (209)
T 2vkw_A 177 EYEVYVVA 184 (209)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999874
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=93.36 E-value=0.33 Score=44.12 Aligned_cols=86 Identities=16% Similarity=0.168 Sum_probs=54.6
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC------CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL------GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~------~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..|++...+. ++..|+|..+... -.-.|+|...... +..+ ..... ......+.|.+|+||
T Consensus 107 ~pP~~l~~~~~~~--~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~--~~~~~------~~~~~~~~l~~L~p~ 175 (214)
T 2b5i_B 107 MAPISLQVVHVET--HRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEA--PLLTL------KQKQEWICLETLTPD 175 (214)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTS--CCEEE------CSCCCEEEECSCCTT
T ss_pred CCCceEEEEEecC--CeEEEEECCCCccccCCCceEEEEEEecCCCC-hhee--eeeee------cccceEEEeccCCCC
Confidence 5788888886553 5899999987532 1346777765421 1111 10110 122346788999999
Q ss_pred cEEEEEeCC----------CCccceEEEECCCC
Q 011680 133 TKYYYKIGD----------GDSSREFWFQTPPK 155 (479)
Q Consensus 133 t~Y~Y~v~~----------g~~~~~~~F~T~p~ 155 (479)
|.|..||.. +.+|+...|+|.|.
T Consensus 176 t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 176 TQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp CEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred CEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 999999863 23456788999885
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=93.31 E-value=0.28 Score=47.97 Aligned_cols=73 Identities=23% Similarity=0.411 Sum_probs=43.1
Q ss_pred CCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC----C--
Q 011680 73 GKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD----G-- 142 (479)
Q Consensus 73 ~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~----g-- 142 (479)
.+++.|+|.-....+ .-.|+|.......+... ... .+....++|++|+|+|.|.+||.. |
T Consensus 306 ~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s 375 (389)
T 2jll_A 306 GKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE----KKV------QGNKDHIILEHLQWTMGYEVQITAANRLGYS 375 (389)
T ss_dssp TTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBC----CEE------CTTCCEEEECSCCTTCEEEEEEEEEC-CCBC
T ss_pred CCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeE----eec------cCCcceEEeCCcCCCCEEEEEEEEEcCCcCC
Confidence 469999998654322 23566665332111100 000 122345688999999999999874 4
Q ss_pred CccceEEEECCCCC
Q 011680 143 DSSREFWFQTPPKI 156 (479)
Q Consensus 143 ~~~~~~~F~T~p~~ 156 (479)
..+ ...|+|+|.|
T Consensus 376 ~~s-~~~~~T~~~P 388 (389)
T 2jll_A 376 EPT-VYEFSMPPKP 388 (389)
T ss_dssp CCE-EEEEECCCCC
T ss_pred Cce-eeEecCCCCC
Confidence 334 5589999875
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.06 E-value=0.44 Score=41.42 Aligned_cols=71 Identities=11% Similarity=0.177 Sum_probs=44.9
Q ss_pred CCCCCceEEEeecCCCCCcEEEEEEcCCCC-----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCC
Q 011680 57 GHNAPQQVRITQGDYDGKAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (479)
Q Consensus 57 ~~~~P~~v~lt~~~~~~~~~~i~W~t~~~~-----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p 131 (479)
.+.+|..+.+.... .+++.|+|...... ..-.|+|............. .-...+++++|+|
T Consensus 102 ~p~~p~~~~~~~~~--~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~~~~L~p 167 (197)
T 3lpw_A 102 RPLPPGKITLMDVT--RNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT------------VKVTEATITGLIQ 167 (197)
T ss_dssp CCCCCSCEEEEEEC--SSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEE------------ESSSEEEECCCCT
T ss_pred CCCCCcccEEEecc--CCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeec------------ccccEEEeCCcCC
Confidence 34578888876444 36999999976432 22467776654332221110 0122468899999
Q ss_pred CcEEEEEeCC
Q 011680 132 DTKYYYKIGD 141 (479)
Q Consensus 132 ~t~Y~Y~v~~ 141 (479)
+|.|.++|..
T Consensus 168 ~t~Y~~~V~A 177 (197)
T 3lpw_A 168 GEEYSFRVSA 177 (197)
T ss_dssp TCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999875
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=93.02 E-value=0.098 Score=47.81 Aligned_cols=91 Identities=19% Similarity=0.337 Sum_probs=52.5
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+.+|..+.+.... .+++.|+|....... .-.|+|....+..... +...... ........++|++|+|+|
T Consensus 99 P~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~~L~p~t 171 (234)
T 3f7q_A 99 PSEPGRLAFNVVS--STVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVL---VDNPKNRMLLIENLRESQ 171 (234)
T ss_dssp CCCCCCCEEEECS--SSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECC---CSCTTCCEEEEECCCTTC
T ss_pred CCCCCccEEEEec--CCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEE---ecCCcceEEEeCCCCCCC
Confidence 3457777777543 368999999764322 2366777654322110 1111111 011223467899999999
Q ss_pred EEEEEeCC------CCccc-eEEEECCCC
Q 011680 134 KYYYKIGD------GDSSR-EFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~------g~~~~-~~~F~T~p~ 155 (479)
.|.++|.. |..+. ...|+|.+.
T Consensus 172 ~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 172 PYRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp CEEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred eEEEEEEEECCCccCCCcCceeEeecCCC
Confidence 99999874 33333 467788664
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=93.02 E-value=0.39 Score=46.88 Aligned_cols=72 Identities=14% Similarity=0.276 Sum_probs=45.2
Q ss_pred CCCceEEEeecCCCCC-cEEEEEEcCC--CCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 59 NAPQQVRITQGDYDGK-AVIISWVTPN--ELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~-~~~i~W~t~~--~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
.+|..|.+.... .+ ++.|+|.... ....-.|+|....+........ .. ..-...+.|++|+|+|.|
T Consensus 4 ~~P~~l~~~~~~--~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~---~~------~~~~~~~~i~~L~p~t~Y 72 (375)
T 3t1w_A 4 SPPTNLHLEANP--DTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---VV------HADQSSCTFDNLSPGLEY 72 (375)
T ss_dssp CCCEEEEEEEET--TTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEE---EE------ETTCCEEEECCCCTTCCE
T ss_pred CCCCccEEEecC--CCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeE---Ec------CCCccEEEEcCCcCCCEE
Confidence 367778777543 35 8999999875 2334577887755322111110 11 112345688999999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
.++|..
T Consensus 73 ~~~V~a 78 (375)
T 3t1w_A 73 NVSVYT 78 (375)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.89 E-value=0.43 Score=42.23 Aligned_cols=84 Identities=14% Similarity=0.075 Sum_probs=49.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCC--C----CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPN--E----LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~--~----~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..+.+.... .+++.|+|.... . ...-.|+|............. . .......++|++|+|+
T Consensus 106 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~---~------~~~~~~~~~i~~L~p~ 174 (205)
T 1cfb_A 106 KNPDNVVGQGTE--PNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN---I------FDWRQNNIVIADQPTF 174 (205)
T ss_dssp CCCSCCEEECSS--TTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE---E------CCTTCCEEEECSCCSS
T ss_pred CCCeeeEeecCC--CCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE---e------cCCCccEEEEcCCCCC
Confidence 357777766433 369999999764 1 123467776655432111100 0 0112345688999999
Q ss_pred cEEEEEeCC------CC-ccceEEEECC
Q 011680 133 TKYYYKIGD------GD-SSREFWFQTP 153 (479)
Q Consensus 133 t~Y~Y~v~~------g~-~~~~~~F~T~ 153 (479)
|.|.++|.. |. ++..-.++|.
T Consensus 175 t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 175 VKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred cEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 999999874 33 3345555554
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=92.75 E-value=0.32 Score=43.29 Aligned_cols=80 Identities=21% Similarity=0.337 Sum_probs=41.8
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCCc----cEEEEEecCCCCcceEEeeEEEEeee--ccccceEEEEEecCCCCCc
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFY--KYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~~----~~V~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~v~l~gL~p~t 133 (479)
+|..+.+..-. .+++.|+|.-....+. -.|+|.................+... +....-...+++++|+|+|
T Consensus 4 pP~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t 81 (214)
T 2ibg_A 4 PPTPPNVTRLS--DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQH 81 (214)
T ss_dssp CCCCCEEEEEE--TTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTC
T ss_pred CCCCCEeeEec--CCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCC
Confidence 44445554332 3699999997654322 35666654321111111110110000 0011234567899999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
.|.|||..
T Consensus 82 ~Y~~~V~A 89 (214)
T 2ibg_A 82 TYRFRILA 89 (214)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999864
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=92.44 E-value=0.69 Score=42.03 Aligned_cols=85 Identities=18% Similarity=0.258 Sum_probs=51.7
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC-----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~-----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
+.+|..|++..... .+++.|+|..+.... .-.|+|....+..+.... .. ..-...+.|.+|+||
T Consensus 122 p~pP~~l~~~~~~~-~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~----~~------~~~~~~~~l~~L~p~ 190 (227)
T 1eer_B 122 LDAPVGLVARLADE-SGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV----EI------LEGRTECVLSNLRGR 190 (227)
T ss_dssp CCCCEEEEEEECSS-TTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE----EE------CTTCCEEEECCCCSS
T ss_pred cCcCcceEEEEcCC-CCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE----EE------ecCceEEEEcccCCC
Confidence 35788888886432 369999999875321 236677655432221100 00 011235788999999
Q ss_pred cEEEEEeCC-----------CCccceEEEECC
Q 011680 133 TKYYYKIGD-----------GDSSREFWFQTP 153 (479)
Q Consensus 133 t~Y~Y~v~~-----------g~~~~~~~F~T~ 153 (479)
|.|..||.. |.+|....|+|+
T Consensus 191 t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 191 TRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp CEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred CeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 999999763 233556678884
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.41 E-value=0.44 Score=45.44 Aligned_cols=87 Identities=11% Similarity=0.001 Sum_probs=51.8
Q ss_pred CCCceEEEeecCC----CCCcEEEEEEcCCCCC----ccEEEEE-ecCCCCcceEEeeEEEEeeeccccceEEEEEecCC
Q 011680 59 NAPQQVRITQGDY----DGKAVIISWVTPNELG----SNRVQYG-KLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDL 129 (479)
Q Consensus 59 ~~P~~v~lt~~~~----~~~~~~i~W~t~~~~~----~~~V~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL 129 (479)
.+|..+.+..... ..+++.|+|..+...+ .-.|+|. ......+..+. . .......+.|.+|
T Consensus 204 ~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~----~------~~~~~~~~~l~~L 273 (313)
T 2d9q_B 204 EPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVG----P------LPLEALQYELCGL 273 (313)
T ss_dssp CCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEE----E------ECSCEEEEEECSC
T ss_pred CcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcc----c------ccCcceEEEEeCC
Confidence 4677776654321 2379999999864222 3467777 44333332221 0 0123456789999
Q ss_pred CCCcEEEEEeCC------CC---ccceEEEECCCC
Q 011680 130 EYDTKYYYKIGD------GD---SSREFWFQTPPK 155 (479)
Q Consensus 130 ~p~t~Y~Y~v~~------g~---~~~~~~F~T~p~ 155 (479)
+|+|+|..||.. |. .|....++|+..
T Consensus 274 ~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 274 LPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp CSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred CCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 999999999863 42 345667888753
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.22 E-value=0.97 Score=40.08 Aligned_cols=89 Identities=15% Similarity=0.203 Sum_probs=49.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-Ccc----EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~----~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
..|..+.+... ..++.+.|...... +.+ .|+|.......+.... +... ........+|.+|+|++
T Consensus 115 ~~p~~~~~~~~---~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~-----~~~~--~~~~~~~l~i~~L~~~~ 184 (215)
T 3mtr_A 115 SSPSIDQVEPY---SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW-----YDAK--EASMEGIVTIVGLKPET 184 (215)
T ss_dssp CCCEEEEEEEE---TTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEE-----EEHH--HHHHHTEEEEECCCTTC
T ss_pred CCCcceEEEEe---cceEEEEEecCCccCCCceEEEEEEEEECCCCcccccc-----cccc--cccccccEEECCCCCCC
Confidence 35655555422 35899999855321 222 4677665543222111 1000 00011456899999999
Q ss_pred EEEEEeCC----C--CccceEEEECCCCCC
Q 011680 134 KYYYKIGD----G--DSSREFWFQTPPKIH 157 (479)
Q Consensus 134 ~Y~Y~v~~----g--~~~~~~~F~T~p~~~ 157 (479)
.|.|||.. | ..+....|+|+|..+
T Consensus 185 ~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 185 TYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred EEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 99999874 4 345677899998643
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=91.93 E-value=0.23 Score=45.81 Aligned_cols=84 Identities=15% Similarity=0.265 Sum_probs=50.3
Q ss_pred CCCCceEEEeecCC--CC--CcEEEEEEcCCCC--------CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEE
Q 011680 58 HNAPQQVRITQGDY--DG--KAVIISWVTPNEL--------GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCL 125 (479)
Q Consensus 58 ~~~P~~v~lt~~~~--~~--~~~~i~W~t~~~~--------~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~ 125 (479)
+.+|..|.++.-.. .+ .++.|+|..+... -.-.|+|....+....... ......+.
T Consensus 131 p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------~~~~~~~~ 198 (236)
T 1axi_B 131 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSVP 198 (236)
T ss_dssp CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEEE
T ss_pred cCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe------------ccCCCEEE
Confidence 45788887654332 21 3599999987532 1235667665432221111 01124578
Q ss_pred ecCCCCCcEEEEEeCC----C----CccceEEEECC
Q 011680 126 VDDLEYDTKYYYKIGD----G----DSSREFWFQTP 153 (479)
Q Consensus 126 l~gL~p~t~Y~Y~v~~----g----~~~~~~~F~T~ 153 (479)
|.+|+|||+|..||.. | .+|+...|+|+
T Consensus 199 l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 199 VYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp EEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred EeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 8999999999999874 3 33556677765
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=91.74 E-value=0.24 Score=38.92 Aligned_cols=58 Identities=19% Similarity=0.295 Sum_probs=38.1
Q ss_pred CCCCcEEEEEEcCCCC-CccEEEEEecCCCCc---ceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 71 YDGKAVIISWVTPNEL-GSNRVQYGKLEKKYD---SSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 71 ~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
-..+++.|+|...... ..-.|+|....+... ..+. +-.-++.|+||+|||+|.-.|..
T Consensus 17 vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~~~~v~-------------g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 17 ITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLP-------------STATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp CGGGCEEEECCCSCTTEEEEEEEEEETTTCCCCEEEEEE-------------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred eCCCeEEEEECCCCCCccEEEEEEEeCCCCCcceEEECC-------------CCccEEEECCCCCCCEEEEEEEE
Confidence 3446899999877532 345778877654211 1111 22345789999999999988764
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=90.63 E-value=1.8 Score=41.74 Aligned_cols=97 Identities=10% Similarity=0.094 Sum_probs=54.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..+.+.... .+++.|+|...... ..-.|+|........... ... ......+.+++|+|++.|.+
T Consensus 187 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~ 254 (368)
T 1fnf_A 187 DSPTGIDFSDIT--ANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE----DRV------PHSRNSITLTNLTPGTEYVV 254 (368)
T ss_dssp CCCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECSCCSSCCEE----EEE------ETTCCEEEEESCCTTCEEEE
T ss_pred CCCCccEEEEcc--CCEEEEEEeCCCCCcCEEEEEEecCCCCCCccE----EEe------CCCcCEEEECCCCCCCEEEE
Confidence 467777665433 46999999986532 234667766543211110 011 11223568899999999999
Q ss_pred EeCC----CCccc-eEEEECCCCCCCCCCeEEEEEec
Q 011680 138 KIGD----GDSSR-EFWFQTPPKIHPDAPYTFGIIGD 169 (479)
Q Consensus 138 ~v~~----g~~~~-~~~F~T~p~~~~~~~~~f~~~gD 169 (479)
+|.. |.+.. ...+.|+|.+ ...+++..+++
T Consensus 255 ~V~A~n~~g~~~~~~~~~~t~p~~--P~~l~~~~~~~ 289 (368)
T 1fnf_A 255 SIVALNGREESPLLIGQQSTVSDV--PRDLEVVAATP 289 (368)
T ss_dssp EEEEEETTEECCCEEEEEECCCCS--CEEEEEEEEET
T ss_pred EEEEEeCCccCCcccccccCCCCC--CCeeEEEecCC
Confidence 9875 22211 3456676642 22345444443
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=90.57 E-value=0.99 Score=43.33 Aligned_cols=73 Identities=14% Similarity=0.245 Sum_probs=46.7
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCC------CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCC
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL------GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~------~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p 131 (479)
+.+|..+.+.......+++.|+|...... -.-.|+|.......+..+.- .....++.|.+|+|
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~-----------~~~~~~~~l~~L~p 265 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-----------KDLQHHCVIHDAWS 265 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-----------GGGCSEEEESSCCT
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc-----------cCCceEEEEeCCCC
Confidence 35788888876543336999999987531 12367777664333322110 11124568999999
Q ss_pred CcEEEEEeCC
Q 011680 132 DTKYYYKIGD 141 (479)
Q Consensus 132 ~t~Y~Y~v~~ 141 (479)
+|.|..||..
T Consensus 266 ~t~Y~~rVrA 275 (325)
T 1n26_A 266 GLRHVVQLRA 275 (325)
T ss_dssp TCCEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 9999999874
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.41 E-value=1.2 Score=47.81 Aligned_cols=94 Identities=18% Similarity=0.343 Sum_probs=51.4
Q ss_pred CCCCCceEEEeecCCCCC---cEEEEEEcCCCCCc----cEEEEEec-CCCCcceEEeeEEEEeeeccccceEEEEEecC
Q 011680 57 GHNAPQQVRITQGDYDGK---AVIISWVTPNELGS----NRVQYGKL-EKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (479)
Q Consensus 57 ~~~~P~~v~lt~~~~~~~---~~~i~W~t~~~~~~----~~V~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~g 128 (479)
.+.+|..|.++......+ ++.|+|.-+..... -.|+|... ........ ....... ..+-...++|++
T Consensus 266 pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~-~~~~~~~----v~~~~~~~~l~~ 340 (680)
T 1zlg_A 266 APPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPT-KKKRRKT----TDGFQNSVILEK 340 (680)
T ss_pred CCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCCc-cceEEEE----EcCCeeEEEeCC
Confidence 345788888764411235 99999996642222 35566522 10000000 0000000 122346788999
Q ss_pred CCCCcEEEEEeCC----CC--ccce---EEEECCCC
Q 011680 129 LEYDTKYYYKIGD----GD--SSRE---FWFQTPPK 155 (479)
Q Consensus 129 L~p~t~Y~Y~v~~----g~--~~~~---~~F~T~p~ 155 (479)
|+|+|.|.+||.. |. .+.. ..++|.+.
T Consensus 341 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 341 LQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 9999999999864 32 2222 67888664
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=90.34 E-value=0.48 Score=48.19 Aligned_cols=71 Identities=14% Similarity=0.259 Sum_probs=44.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC--CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
..|..|+++-... +++.|+|..+.. ...-.|+|.+...... ...+. .+.-..+++|+||+|||+|.
T Consensus 371 ~~~~~l~~~~~~~--~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~----~~~~~------~~~~~~~~~i~~L~p~t~Y~ 438 (461)
T 3csg_A 371 SVPTNLEVVAATP--TSLLISWDASYSSSVSYYRITYGETGGNSP----VQEFT------VPGSKSTATISGLSPGVDYT 438 (461)
T ss_dssp CSSCCCEEEEECS--SCEEEECCCTTGGGCSEEEEEEEETTCCSC----CEEEE------EETTCCEEEECSCCTTCEEE
T ss_pred CCCcceEEeccCC--CeEEEEecCCCCCcceEEEEEEEECCCCcc----ceEEE------ecCCCceEEecCCCCCCEEE
Confidence 4677788886554 589999987621 1134677766542110 01111 11223568999999999999
Q ss_pred EEeCC
Q 011680 137 YKIGD 141 (479)
Q Consensus 137 Y~v~~ 141 (479)
.+|..
T Consensus 439 ~~v~a 443 (461)
T 3csg_A 439 ITVYA 443 (461)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99874
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=90.25 E-value=1.4 Score=42.80 Aligned_cols=84 Identities=12% Similarity=0.145 Sum_probs=50.6
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC-CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~-~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..+.+.... .+++.|+|..+.. ...-.|+|........... ... ..-...++|+||+|||.|.+
T Consensus 279 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~ 346 (375)
T 3t1w_A 279 DSPTGIDFSDIT--ANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE----DRV------PHSRNSITLTNLTPGTEYVV 346 (375)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEEETTCCSSCEE----EEE------ETTCCEEEECSCCTTCEEEE
T ss_pred CCCCccEeeecc--CCEEEEEECCCCcceeeEEEEEEECCCCCccee----EEc------CCCccEEEECCCCCCCEEEE
Confidence 467777765333 4699999998643 2344677877653111100 111 11133568999999999999
Q ss_pred EeCC----CCcc-ceEEEECCC
Q 011680 138 KIGD----GDSS-REFWFQTPP 154 (479)
Q Consensus 138 ~v~~----g~~~-~~~~F~T~p 154 (479)
+|.. |.+. -.+.++|.-
T Consensus 347 ~V~A~~~~G~s~p~s~~~~~~~ 368 (375)
T 3t1w_A 347 SIVALNGREESPLLIGQQSTVS 368 (375)
T ss_dssp EEEEEETTEECCCEEEEEECCC
T ss_pred EEEEECCCCCCCceeeeeEEee
Confidence 9875 3332 256677654
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=89.90 E-value=2.8 Score=38.94 Aligned_cols=72 Identities=14% Similarity=0.208 Sum_probs=43.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC-CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE-LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~-~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
.|..+.+.... +++.|+|..... ...-.|+|............- ... .........+++|+|+|.|.++
T Consensus 104 p~~~~~~~~~~---~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~L~p~t~Y~~~ 173 (290)
T 3l5i_A 104 PVMDLKAFPKD---NMLWVEWTTPRESVKKYILEWCVLSDKAPCITDW--QQE-----DGTVHRTYLRGNLAESKCYLIT 173 (290)
T ss_dssp CCEEEEEEEET---TEEEEEEECCSSCCCEEEEEEEEECSSSCCCCEE--EEE-----ETTCSEEECCSCCCTTCEEEEE
T ss_pred ccceeEEEeCC---CeEEEEEeCCCCCCCcEEEEEEECCCCCCCCcCe--EEc-----cCCCcceEEecCcCCccEEEEE
Confidence 45556665443 599999998754 234577787655432100000 000 1223445678999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 174 V~A 176 (290)
T 3l5i_A 174 VTP 176 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.41 E-value=0.76 Score=37.10 Aligned_cols=79 Identities=15% Similarity=0.214 Sum_probs=47.4
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC--CCc----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE--LGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~--~~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+|..+.+.. . .+++.|+|.-... ... -.|.|......... .+. ... ..+++. |+|+|
T Consensus 21 ~P~~v~~~~-~--~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~-------~~~----~~~--~~~~~~-L~~~t 83 (117)
T 1wj3_A 21 PPGNVVWNA-T--DTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQ-------VLN----TNK--TSAELV-LPIKE 83 (117)
T ss_dssp CCCSCBCCE-E--TTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCE-------EEE----ESS--SEEEEE-CCCSS
T ss_pred CCccEEEEE-e--CCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCe-------EEe----CCC--cEEEEE-CCCCC
Confidence 566666654 2 3689999987732 221 35566655432221 111 011 245667 99999
Q ss_pred EEEEEeCC------CCccceEEEECCCC
Q 011680 134 KYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
.|.+||.. |..+....|+|...
T Consensus 84 ~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 84 DYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp CEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 99999864 45556778888753
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.69 E-value=1.1 Score=40.14 Aligned_cols=73 Identities=15% Similarity=0.037 Sum_probs=40.5
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC---ccEEEEEecCC-CCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG---SNRVQYGKLEK-KYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~---~~~V~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+.+|..+++..... .+++.|+|..+.... .-.|+|..... .....+.- ...-...+.|.+|+|||
T Consensus 110 p~pP~~l~v~~~~~-~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t 178 (206)
T 3v6o_A 110 PLPPSSVKAEITIN-IGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEV----------YDAKSKSVSLPVPDLCA 178 (206)
T ss_dssp CCCCCSCEEEEETT-TTEEEEEC--------CEEEEEEEEESSSSCCCEEEEE----------CC---CEEEECCSCTTS
T ss_pred CCCCCceEeEEecC-CCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEec----------ccCcceeEEeecCCCCC
Confidence 35777788776433 369999999875322 23567766542 12211110 01112357899999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
.|..||..
T Consensus 179 ~Y~vqVRa 186 (206)
T 3v6o_A 179 VYAVQVRC 186 (206)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999864
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.13 E-value=1.9 Score=39.05 Aligned_cols=87 Identities=20% Similarity=0.166 Sum_probs=53.5
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCC---------CccEEEEEecCCCCcceE-EeeEEEEeeeccccceEEEEEec
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL---------GSNRVQYGKLEKKYDSSA-EGTVTNYTFYKYKSGYIHHCLVD 127 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~---------~~~~V~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~h~v~l~ 127 (479)
+.+|..|.+.. .....|+|..+... -.-.|+|....+ .+..+ ... .. ........+.+.
T Consensus 101 p~PP~nltv~~----~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~--~~----~~~~~~~~~~~~ 169 (219)
T 3tgx_A 101 PAPPFDVTVTF----SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRK--LI----SVDSRSVSLLPL 169 (219)
T ss_dssp CCCCEEEEEEE----SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEE--EE----CSSCSEEEECTT
T ss_pred eCCCCceEEEe----CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-Cceecccce--eE----ecCCCEEEEEec
Confidence 35787777763 25899999987421 124677777653 22111 111 11 012335567789
Q ss_pred CCCCCcEEEEEeCC---------C---CccceEEEECCCC
Q 011680 128 DLEYDTKYYYKIGD---------G---DSSREFWFQTPPK 155 (479)
Q Consensus 128 gL~p~t~Y~Y~v~~---------g---~~~~~~~F~T~p~ 155 (479)
+|+|||.|..||.. | .+|+...|+|++.
T Consensus 170 ~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 170 EFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp SSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred cCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 99999999999853 3 2356888999875
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.37 E-value=0.5 Score=49.32 Aligned_cols=90 Identities=19% Similarity=0.189 Sum_probs=53.3
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+.+|..+.+.......+++.|+|..+.... .-.|+|.......+..+... ........+.+++|+|+|
T Consensus 199 p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--------~~~~~~~~~~i~~L~p~t 270 (589)
T 3l5h_A 199 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 270 (589)
T ss_dssp CCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT--------SSCSCCSEEEECSCCSSC
T ss_pred cCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc--------cCcCceeEEEECCCCCCC
Confidence 347778888644444579999999764222 24667766543322211000 011223456899999999
Q ss_pred EEEEEeCC----C--Cc---cceEEEECCCC
Q 011680 134 KYYYKIGD----G--DS---SREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~----g--~~---~~~~~F~T~p~ 155 (479)
.|.+||.. | .. +....++|++.
T Consensus 271 ~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 271 EYVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp CEEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 99999864 2 21 34556777653
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=86.64 E-value=2.2 Score=44.72 Aligned_cols=68 Identities=19% Similarity=0.181 Sum_probs=44.6
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC-CC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE-LG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~-~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
+|....++-... +++.++|..+.. .+ .-.||+....+..+..+. ++ . . -..+++||.||+.
T Consensus 12 pP~~P~v~~~~~--~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~---~------~--t~~~V~~L~~g~~ 77 (573)
T 3uto_A 12 PPRFPIIENILD--EAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS---R------Y--TYTTIEGLRAGKQ 77 (573)
T ss_dssp CCEEEEEEEECS--SCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE---S------S--SEEEECCCCTTCE
T ss_pred cCCCCEEEEeeC--CEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc---c------C--CEEEeCCCCCCCc
Confidence 455555554343 699999998742 22 246788777766665542 21 0 1 1357899999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|.+||..
T Consensus 78 Y~FRV~A 84 (573)
T 3uto_A 78 YEFRIIA 84 (573)
T ss_dssp EEEEEEE
T ss_pred EeEEEEE
Confidence 9999875
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=86.58 E-value=0.31 Score=36.48 Aligned_cols=34 Identities=18% Similarity=0.255 Sum_probs=23.9
Q ss_pred EEEEEecCCCCCcEEEEEeCC----CCc-cceEEEECCC
Q 011680 121 IHHCLVDDLEYDTKYYYKIGD----GDS-SREFWFQTPP 154 (479)
Q Consensus 121 ~h~v~l~gL~p~t~Y~Y~v~~----g~~-~~~~~F~T~p 154 (479)
.+.-+|.||+||++|.-++.+ |.+ ...+.|+|--
T Consensus 37 ~nSYtIsGLkPGvtYegQLisV~r~g~~EvtrfdfTT~~ 75 (89)
T 1q38_A 37 LNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 75 (89)
T ss_dssp SSCCCCCCCCTTCCEEEEEEEECTTSCCCEEEEEECSSS
T ss_pred cceEEEeccCCCcEEEEEEEeeeecccCCceEEEEEecc
Confidence 344478999999999988765 433 3466777754
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=86.55 E-value=4.2 Score=39.33 Aligned_cols=84 Identities=23% Similarity=0.333 Sum_probs=49.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-Ccc----EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~----~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.+.... .+++.|+|...... +.+ .|+|.......+.... .........|.+|+|++
T Consensus 197 ~~P~~~~~~~~~--~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~ 263 (389)
T 2jll_A 197 SSPYGVKIIELS--QTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-----------SHGVQTMVVLNNLEPNT 263 (389)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-----------CSTTCSEEEECSCCTTC
T ss_pred CCCcceEEeecc--CCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-----------ccCCcceEEECCccCCC
Confidence 356566655433 36899999854322 222 4666665433222111 11223456889999999
Q ss_pred EEEEEeCC----C--CccceEEEECCCC
Q 011680 134 KYYYKIGD----G--DSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~----g--~~~~~~~F~T~p~ 155 (479)
.|.|+|.. | ..+....++|.+.
T Consensus 264 ~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 264 TYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 99999864 3 3345677888664
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=85.98 E-value=2.5 Score=43.96 Aligned_cols=93 Identities=17% Similarity=0.174 Sum_probs=50.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC-----ccEEEEEecCCCCc-ceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYD-SSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~-----~~~V~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..+... ...+++.|+|..+...+ .-.|+|........ ....+....+... ........++|++|+|+
T Consensus 335 saP~nl~~~---vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~ts~tI~gL~P~ 410 (536)
T 3fl7_A 335 SAPHYLTAV---GMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEP-PHGLTRTSVTVSDLEPH 410 (536)
T ss_dssp CCBSCEEEE---CCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSC-SSSBCSSEEEEECCCTT
T ss_pred CcccceEEE---ecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEe-ecCCccceeEeCCCCCC
Confidence 477777443 23479999999765322 23566665321100 0000111111100 01123456789999999
Q ss_pred cEEEEEeCC----CC-----ccceEEEECCCC
Q 011680 133 TKYYYKIGD----GD-----SSREFWFQTPPK 155 (479)
Q Consensus 133 t~Y~Y~v~~----g~-----~~~~~~F~T~p~ 155 (479)
|.|.++|.. |. .+....++|+|.
T Consensus 411 T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~ 442 (536)
T 3fl7_A 411 MNYTFTVEARNGVSGLVTSRSFRTASVSINQT 442 (536)
T ss_dssp CEEEEEEEEECTTGGGCSCCCEEEEEEECCSC
T ss_pred CEEEEEEEEEecCCCCCCCCccceeEEeeccc
Confidence 999999864 32 234667888764
|
| >2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A* | Back alignment and structure |
|---|
Probab=85.88 E-value=0.79 Score=48.59 Aligned_cols=93 Identities=25% Similarity=0.480 Sum_probs=50.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCCcceEEeeEE-E---Ee--------ee-ccc-----cce
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVT-N---YT--------FY-KYK-----SGY 120 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~~~~~~~~~~-~---~~--------~~-~~~-----~~~ 120 (479)
.+|..|.+.-....+++++|.|..++. ......|..--... .+ ++.. . ++ ++ +-. .-.
T Consensus 36 ~~p~~~~~~t~~~~~~si~l~~~~p~~-~~~~~~y~vy~ng~--~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (608)
T 2uvf_A 36 DAPQQLQVPTLAYDESSIVLVWKAPED-TRKIVDYQIFSAGK--LL-GKASDNNDNFSPAKPYIDHFYVNDKDNFQHKIV 111 (608)
T ss_dssp CCCEEEECCTTCBCSSCEEEEEECCSC-CTTEEEEEEEETTE--EE-EEHHHHHHHHCSSHHHHHHHHHTCGGGCSCCCC
T ss_pred CCCCceEeeecccCCcEEEEEEeCCcc-ccccccEEEEECCE--Ee-Eeeccccccccccccccccccccccccccceee
Confidence 367777764223334799999998863 33444554432110 01 1110 0 00 00 000 012
Q ss_pred EEEEEecCCCCCcEEEEEeCC----CC---ccceEEEECCCC
Q 011680 121 IHHCLVDDLEYDTKYYYKIGD----GD---SSREFWFQTPPK 155 (479)
Q Consensus 121 ~h~v~l~gL~p~t~Y~Y~v~~----g~---~~~~~~F~T~p~ 155 (479)
.++.++++|+|+|+|.|++.. |. .++.-..+|.+.
T Consensus 112 ~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 112 MQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred eeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 467889999999999999864 43 234555666654
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=85.76 E-value=5.3 Score=39.59 Aligned_cols=77 Identities=21% Similarity=0.248 Sum_probs=46.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC-----------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecC
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG-----------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~-----------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~g 128 (479)
+|. |.+.... +++.|+|. +.... .-.|.|+........... +-...++|++
T Consensus 108 pP~-v~~~~~~---~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~-------------~~~~~~~i~~ 169 (414)
T 3se4_A 108 PPE-VHLEAED---KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIE-------------NIYSRHKIYK 169 (414)
T ss_dssp CCE-EEEEECS---SCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEE-------------EECSEEEECC
T ss_pred CCe-EEEEEcC---CEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEe-------------cCCcEEEEcC
Confidence 443 7765433 48999999 64221 235677766543221111 1123578999
Q ss_pred CCCCcEEEEEeCC--------CCccceEEEECCC
Q 011680 129 LEYDTKYYYKIGD--------GDSSREFWFQTPP 154 (479)
Q Consensus 129 L~p~t~Y~Y~v~~--------g~~~~~~~F~T~p 154 (479)
|+|+|.|..+|.. |..++...++|..
T Consensus 170 L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 170 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp CCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred CCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 9999999999763 2234455677754
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.74 E-value=8.2 Score=36.56 Aligned_cols=77 Identities=21% Similarity=0.248 Sum_probs=45.5
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC-----------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecC
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG-----------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~-----------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~g 128 (479)
+|. |.+...+ +++.|+|. +.... .-.|.|+...........+ -...++|.+
T Consensus 104 pP~-v~~~~~~---~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~~-------------~~~~~~l~~ 165 (306)
T 3s98_A 104 PPE-VHLEAED---KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYK 165 (306)
T ss_dssp CCE-EEEEECS---SCEEEEEE-CC---CCCC-----CCEEEEEEEETTTCCCEEEEE-------------ECTEEEECS
T ss_pred CCe-EEEEEcC---CEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCCCeEEEec-------------ccceEEEcc
Confidence 454 7766433 48999999 32211 1256666654332211111 123578999
Q ss_pred CCCCcEEEEEeCC--------CCccceEEEECCC
Q 011680 129 LEYDTKYYYKIGD--------GDSSREFWFQTPP 154 (479)
Q Consensus 129 L~p~t~Y~Y~v~~--------g~~~~~~~F~T~p 154 (479)
|+|+|.|..+|.. |..++...++|..
T Consensus 166 L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 166 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp CCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred CCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 9999999999752 4445566777754
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.98 E-value=3.7 Score=36.34 Aligned_cols=79 Identities=18% Similarity=0.182 Sum_probs=47.5
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC--------------CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL--------------GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCL 125 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~--------------~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~ 125 (479)
+| .|++...+ +++.|.|..+... -.-.|.|+........... + . ...++
T Consensus 96 PP-~v~~~~~~---~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~------~-----~--~~~~~ 158 (201)
T 3lqm_A 96 PP-GMQVEVLA---DCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQIT------P-----Q--YDFEV 158 (201)
T ss_dssp CC-EEEEEEET---TEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEEC------C-----S--SSEEE
T ss_pred CC-EEEEEEeC---CEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEE------e-----c--CceEE
Confidence 44 57775433 5999999876411 1235556554332211110 0 0 12478
Q ss_pred ecCCCCCcEEEEEeCC--------CCccceEEEECCCC
Q 011680 126 VDDLEYDTKYYYKIGD--------GDSSREFWFQTPPK 155 (479)
Q Consensus 126 l~gL~p~t~Y~Y~v~~--------g~~~~~~~F~T~p~ 155 (479)
|.+|+|+|.|..+|.. |..|+...|+|.+.
T Consensus 159 l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 159 LRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp ECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred EecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 9999999999999763 44456777888763
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.27 E-value=1.7 Score=38.14 Aligned_cols=60 Identities=18% Similarity=0.306 Sum_probs=35.9
Q ss_pred CCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 72 DGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 72 ~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
..+++.|+|...... ..-.|+|........... ... .+-...+.|+||+|+|.|.++|..
T Consensus 124 ~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~----~~v------~~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 124 TASSFVVSWVSASDTVSGFRVEYELSEEGDEPQY----LDL------PSTATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp CSCCEEEECCCSCTTEEEEEEEEEETTTCCCCEE----EEE------ETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCCeEEEEEeCCCCCccEEEEEEEECCCCCceeE----EEc------CCceeEEEeCCCCCCCEEEEEEEE
Confidence 346999999876432 223566765432111100 010 122346789999999999999874
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=83.99 E-value=1.2 Score=45.76 Aligned_cols=89 Identities=18% Similarity=0.243 Sum_probs=53.3
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCCc----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+.+|..|++.... .+++.|+|..+..... -.|+|.......+. .. .... . ...-.+.+.|.+|+|+|
T Consensus 387 P~PP~nl~v~~~s--~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~-~~---~~~~--~-~~~~~~~v~l~~L~P~T 457 (488)
T 2q7n_A 387 PHDPTSLKVKDIN--STVVTFSWYLPGNFTKINLLCQIEICKANSKKEV-RN---ATIR--G-AEDSTYHVAVDKLNPYT 457 (488)
T ss_dssp CCCCEEEEEEECS--TTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEE-EE---EEEE--C-CEEEEEEEEECSCCSSC
T ss_pred CCCCeEEEEEecC--CCEEEEEEeCCCCCCCcceEEEEEEEECCCCCce-EE---EEEe--c-CCCcEEEEEeCCCCCCc
Confidence 4578888876533 3699999998753222 35666655432111 00 0110 0 01235667999999999
Q ss_pred EEEEEeCC-----C---CccceEEEECCCC
Q 011680 134 KYYYKIGD-----G---DSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~-----g---~~~~~~~F~T~p~ 155 (479)
+|..||.. | ..|+...|+|++.
T Consensus 458 ~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 458 AYTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp CBBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred eEEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 99999763 3 3455667888763
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=83.35 E-value=4.6 Score=35.59 Aligned_cols=70 Identities=13% Similarity=0.170 Sum_probs=46.4
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCC--CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~--~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+.+|..|+++...+ ..+.|+|..+... -.-.|+|....+..+..+.. .......|.+|+|++.|
T Consensus 99 P~pP~~l~~~~~~~--~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~------------~~~~~~~l~~l~p~~~Y 164 (199)
T 2b5i_C 99 PWAPENLTLHKLSE--SQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRY 164 (199)
T ss_dssp CCCCEEEEEEEEET--TEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEE------------CSSCEEEECSCCTTSCE
T ss_pred cCCCcEEEEEECCC--CCEEEEECCCCCCCceEEEEEEeecCCcccEEEec------------cCceEEEecCCCCCcEE
Confidence 35788888886543 5999999987521 13468888765443332210 11235678999999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
..||..
T Consensus 165 ~vqVR~ 170 (199)
T 2b5i_C 165 TFRVRS 170 (199)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999863
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.22 E-value=4.3 Score=43.36 Aligned_cols=81 Identities=12% Similarity=0.142 Sum_probs=45.9
Q ss_pred CCC-ceEEEeecCCCCCcEEEEEEcCCCC-Cc---cEEEEEecCC--------CCcceEEeeEEEEeeeccccceEEEEE
Q 011680 59 NAP-QQVRITQGDYDGKAVIISWVTPNEL-GS---NRVQYGKLEK--------KYDSSAEGTVTNYTFYKYKSGYIHHCL 125 (479)
Q Consensus 59 ~~P-~~v~lt~~~~~~~~~~i~W~t~~~~-~~---~~V~y~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~h~v~ 125 (479)
.+| ..+.++-. ..+++.|+|...... .. -.|+|....+ ..+..+.. .....++
T Consensus 161 ~~P~~~l~v~~~--~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~~~~~~~w~~v~~------------~~~~~~~ 226 (680)
T 1zlg_A 161 LKPRKELRFTEL--QSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQ------------TTDERVQ 226 (680)
T ss_pred ccccccceEEec--cCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcCccccCceEEEEe------------cCCCeEE
Confidence 356 56666643 346999999976321 11 3566655422 01111110 1123467
Q ss_pred ecCCCCCcEEEEEeCC----C---CccceEEEECC
Q 011680 126 VDDLEYDTKYYYKIGD----G---DSSREFWFQTP 153 (479)
Q Consensus 126 l~gL~p~t~Y~Y~v~~----g---~~~~~~~F~T~ 153 (479)
|++|+|+|.|.|||.. | .++..-.|+|.
T Consensus 227 i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~ 261 (680)
T 1zlg_A 227 LTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSS 261 (680)
T ss_pred eCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcC
Confidence 9999999999999864 4 23334456663
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=82.22 E-value=12 Score=36.92 Aligned_cols=99 Identities=15% Similarity=0.187 Sum_probs=56.5
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC----------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEec
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVD 127 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~ 127 (479)
+.+|..|.++..+ +.+.|+|..+.... .-.|+|.... ..+..+... . .....+.+.+.
T Consensus 109 p~pP~~l~v~~~~---~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~--~------~~~~~~~~~~~ 176 (419)
T 2gys_A 109 PPEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL--L------SNTSQATLGPE 176 (419)
T ss_dssp CCCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEE--E------ESSSEEEECTT
T ss_pred CCCCCceEEEecC---CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeee--c------ccceEEEechh
Confidence 3578889888644 49999999875321 1356666654 222211110 0 01222333445
Q ss_pred CCCCCcEEEEEeCC---------CC---ccceEEEECCCCCCCCCCeEEEEEec
Q 011680 128 DLEYDTKYYYKIGD---------GD---SSREFWFQTPPKIHPDAPYTFGIIGD 169 (479)
Q Consensus 128 gL~p~t~Y~Y~v~~---------g~---~~~~~~F~T~p~~~~~~~~~f~~~gD 169 (479)
+|.|+++|..||.. |. .|+...|+|++.. ...+..+-.+.+
T Consensus 177 ~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~~~ 229 (419)
T 2gys_A 177 HLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECFFD 229 (419)
T ss_dssp TCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEEEC
T ss_pred hcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEEEC
Confidence 99999999999763 22 2457788998764 334445444443
|
| >4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.57 E-value=7.3 Score=35.15 Aligned_cols=79 Identities=16% Similarity=0.186 Sum_probs=49.6
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-----C------------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-----G------------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIH 122 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-----~------------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 122 (479)
+|+ |.++.. .+++.|.|.-+... + .-.|.|+....... .. ... . .+
T Consensus 111 PP~-v~v~~~---~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~--~~---~~~------~--~~ 173 (221)
T 4doh_R 111 PPE-VALTTD---EKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRT--WS---QCV------T--NH 173 (221)
T ss_dssp CCE-EEEECC---SSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEE--EE---EEE------C--SS
T ss_pred CCE-EEEEEC---CCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcE--EE---Eee------c--Cc
Confidence 565 888742 25999999966421 1 23666666543211 11 010 1 13
Q ss_pred EEEecCCCCCcEEEEEeCC--------CCccceEEEECCCC
Q 011680 123 HCLVDDLEYDTKYYYKIGD--------GDSSREFWFQTPPK 155 (479)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~--------g~~~~~~~F~T~p~ 155 (479)
.+.|.+|+|+|.|..+|.. |..|+...|+|.+.
T Consensus 174 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 174 TLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred EEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 6789999999999999752 44566788999775
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=81.52 E-value=4.3 Score=38.43 Aligned_cols=80 Identities=11% Similarity=0.116 Sum_probs=43.9
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCCc----cEEEEEecCCCCcceEEeeE-EE-EeeeccccceEEEEEecCCCC
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTV-TN-YTFYKYKSGYIHHCLVDDLEY 131 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~----~~V~y~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~h~v~l~gL~p 131 (479)
+.+|..|++... .+++.|+|..+..... -.|+|....+..+....... .. .............+.|.+|+|
T Consensus 200 P~pP~~l~~~~~---~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p 276 (314)
T 3bpo_C 200 PDPPHIKNLSFH---NDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLP 276 (314)
T ss_dssp CCCCEEEEEEEE---TTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCT
T ss_pred eCCCCEEEEEEc---CCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCC
Confidence 357888888732 2599999998863222 35667655432221110000 00 000000012356778999999
Q ss_pred CcEEEEEeC
Q 011680 132 DTKYYYKIG 140 (479)
Q Consensus 132 ~t~Y~Y~v~ 140 (479)
+|.|..||.
T Consensus 277 ~t~Y~~qVr 285 (314)
T 3bpo_C 277 DTLNTVRIR 285 (314)
T ss_dssp TSCEEEEEE
T ss_pred CCEEEEEEE
Confidence 999999976
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=81.31 E-value=5.5 Score=35.40 Aligned_cols=88 Identities=10% Similarity=0.068 Sum_probs=45.4
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCC---C----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCC
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL---G----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~---~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~ 130 (479)
+.+|..|.+.... .....|+|..+... . .-.|+|....+.-. ..... . ..........+.+|.
T Consensus 98 p~PP~nl~~~~~~--~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~-~~~~~--~-----~~~~~~~~~~~~~L~ 167 (207)
T 1iar_B 98 PRAPGNLTVHTNV--SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPAD-FRIYN--V-----TYLEPSLRIAASTLK 167 (207)
T ss_dssp CCCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSC-EEEEE--E-----CSSCCEEEECC----
T ss_pred cCCCCCeEEEEcc--CCCEEEEECCCCCccccccccEEEEEEEccCCCchh-heeee--e-----ecCCcEEEEEHHHCC
Confidence 4578888888533 24899999987421 1 24677876543221 11100 0 012334556678999
Q ss_pred CCcEEEEEeCC------C---CccceEEEECCCC
Q 011680 131 YDTKYYYKIGD------G---DSSREFWFQTPPK 155 (479)
Q Consensus 131 p~t~Y~Y~v~~------g---~~~~~~~F~T~p~ 155 (479)
||+.|..||.. | ++|....|+|.++
T Consensus 168 p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 168 SGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp -CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 99999999874 4 3356778888764
|
| >3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A | Back alignment and structure |
|---|
Probab=80.79 E-value=2 Score=41.12 Aligned_cols=67 Identities=15% Similarity=0.267 Sum_probs=39.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCC-CCCccEEEEEecCCCC--cceEE--eeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPN-ELGSNRVQYGKLEKKY--DSSAE--GTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~-~~~~~~V~y~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.++.+. +.+.++|.... ......|.=++..... .+.+. ++.++|++ ++|.+||
T Consensus 19 ~~~~~L~at~~~---~~v~LsWs~s~~~v~~~~VYRdT~s~~sgr~ria~~~~st~tytD-------------t~~~~Gt 82 (344)
T 3b4n_A 19 AAQTTLMLSQKS---DVNYLGWSTDESKVARQEVYRGTTSNPDLRERIAVLDAETRTFKD-------------ADTNSGL 82 (344)
T ss_dssp -CCEEEEEEEET---TEEEEEEEECCSSEEEEEEEEESSSCGGGCEEEEEECSSCCEEEE-------------CCCCTTC
T ss_pred CCCceeeeeccC---CeEEEEeecCCCCeeeEEEEccCCCCCCcceEEEeecccccEEEe-------------cCcCCCc
Confidence 366667666633 58999999875 2222333223332221 22332 33445543 6899999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
+|||.|..
T Consensus 83 tYyYwVk~ 90 (344)
T 3b4n_A 83 NYWYWVDV 90 (344)
T ss_dssp CCEEEEEE
T ss_pred EEEEEEEE
Confidence 99999874
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.65 E-value=1.1 Score=45.92 Aligned_cols=89 Identities=18% Similarity=0.193 Sum_probs=53.9
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+.+|..|.+.... .+++.|+|..+.... .-.|+|....+..... ..... ......+.+.|.+|+|+|
T Consensus 382 P~PP~nl~v~~~~--stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~------~vsv~-~~~~~~~s~~l~~L~PgT 452 (483)
T 3e0g_A 382 PHTPTSFKVKDIN--STAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR------NVTIQ-GVENSSYLVALDKLNPYT 452 (483)
T ss_dssp CCCCEEEEECCSS--SSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE------ECCCB-CCSSSBCCCCCCSCCSSS
T ss_pred CCCCeeeEEEEec--CCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE------EEEEe-ccCCceeEEEEeccCCCc
Confidence 3578888876432 368999999875322 3478888765322110 11100 001123457899999999
Q ss_pred EEEEEeCC--------CCccceEEEECCCC
Q 011680 134 KYYYKIGD--------GDSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~--------g~~~~~~~F~T~p~ 155 (479)
+|..||.. +.+|+...|+|+.+
T Consensus 453 ~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 453 LYTFRIRCSTETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp SCEEEEECCCSSCCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEeeCCCCCcCCCCCceeeECCCC
Confidence 99999874 12345667888653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 479 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 6e-89 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 4e-46 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 2e-42 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 4e-12 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 1e-08 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 2e-04 | |
| d1x5ka1 | 111 | b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [ | 7e-04 | |
| d1wf5a1 | 108 | b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) | 0.001 | |
| d1uena_ | 125 | b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens | 0.002 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 272 bits (696), Expect = 6e-89
Identities = 186/306 (60%), Positives = 231/306 (75%), Gaps = 3/306 (0%)
Query: 155 KIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQ--SVLFLGDLSYADRYEYNDVGIRW 212
+ D PYTFG+IGDLGQ+++S +TL HY S + +VLF+GDLSYADRY +D +RW
Sbjct: 1 QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRW 59
Query: 213 DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYA 272
D+WGRF E+S AYQPWIW+AGNHEIEF P + E PFK + +R PY AS+ST+P WY+
Sbjct: 60 DTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYS 119
Query: 273 IRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYME 332
I+RASAHIIVLSSYS Y + TPQ+ WL++EL+KV R +TPWLIVLMH PLY+S H+ME
Sbjct: 120 IKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFME 179
Query: 333 GESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTV 392
GE+MR FE+WFV +VD +FAGHVHAYERS R+SNI Y T+G PV D+SAPVY+T+
Sbjct: 180 GEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITI 239
Query: 393 GDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVV 452
GD GN + + PQP YSAFREAS+GH +IKNRTHA + WNRN DG V DSV
Sbjct: 240 GDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVW 299
Query: 453 FHNQYW 458
F N++W
Sbjct: 300 FFNRHW 305
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 153 bits (389), Expect = 4e-46
Identities = 55/111 (49%), Positives = 78/111 (70%)
Query: 44 DIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSS 103
D+PL + VF +P G+NAPQQV ITQGD G+A+IISWVT +E GS+ V+Y +
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRI 61
Query: 104 AEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPP 154
A+G ++ Y F+ Y SG+IHH + L+Y+TKYYY++G +++R F F TPP
Sbjct: 62 AKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 144 bits (365), Expect = 2e-42
Identities = 63/114 (55%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
Query: 42 SADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTP-NELGSNRVQYGKLEKKY 100
D+P + VF +P G+NAPQQV ITQGDY+G+ VIISW TP ++ G+N+V Y K
Sbjct: 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKS 65
Query: 101 DSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPP 154
A GTV Y +Y Y S +IHHC + DLEYDTKYYY++G GD+ R+FWF TPP
Sbjct: 66 QKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 64.8 bits (156), Expect = 4e-12
Identities = 40/308 (12%), Positives = 80/308 (25%), Gaps = 44/308 (14%)
Query: 158 PDAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQS-----------VLFLGDLSYADRYEYN 206
P F +GD G N+ M + +L LGD Y
Sbjct: 1 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 60
Query: 207 DVGIRWDSWGRFIEQSAAYQ-PWIWSAGNHEIEFMPNMGE---------VIPFKSYLHRI 256
+++ + PW AGNH+ + P Y R
Sbjct: 61 KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRF 120
Query: 257 ATPYTASKST----NPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTP 312
P + + + Q W++++L K
Sbjct: 121 KIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKED 177
Query: 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYN 372
+++V H P++S + + +V GH H + + + +
Sbjct: 178 YVLVAGHYPVWSIA--EHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFV 235
Query: 373 FTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTH 432
+ + P K + G + + G + +EI +
Sbjct: 236 LSGAGNFMDPSKKHLRKVPNG--------------YLRFHFGAENSLGGFAYVEITPKEM 281
Query: 433 AFYHWNRN 440
+ + +
Sbjct: 282 SVTYIEAS 289
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 54.0 bits (128), Expect = 1e-08
Identities = 30/203 (14%), Positives = 53/203 (26%), Gaps = 3/203 (1%)
Query: 213 DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYA 272
D+ I + + + VI + + + N
Sbjct: 119 DTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQD 178
Query: 273 IRRASAHIIVLSSYSPYVKYTP--QWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY 330
+ + + + + Q WL L D ++ ++ H+P++
Sbjct: 179 LNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERV-LIFSHLPVHPCAADPI 237
Query: 331 MEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYL 390
+ AV H V AGH H R S + G P A
Sbjct: 238 CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIETPPHSHAFATA 297
Query: 391 TVGDGGNQEGLAGRFLDPQPNYS 413
+ + GR D YS
Sbjct: 298 YLYEDRMVMKGRGRVEDLTITYS 320
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 40.9 bits (94), Expect = 2e-04
Identities = 15/183 (8%), Positives = 42/183 (22%), Gaps = 13/183 (7%)
Query: 180 LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239
+K +G ++ +G+L D F S A+ P + G +
Sbjct: 25 VKLAPDTGADAIALIGNL-------MPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPI 77
Query: 240 MPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWL 299
+ E + + + + + W+
Sbjct: 78 WEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEH--EALRYPAWV 135
Query: 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359
E K E + + + + ++ + + ++ +
Sbjct: 136 AEYRLKALWELKDYPKIFLFHTMPYHKGLNEQGSHEVAHLIKTH----NPLLVLVAGKGQ 191
Query: 360 YER 362
Sbjct: 192 KHE 194
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (85), Expect = 7e-04
Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 10/101 (9%)
Query: 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSG 119
P+ V + + K +I++W P+E Y ++ G
Sbjct: 14 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPV----VG 69
Query: 120 YIHHCLVDDLEYDTKYYYKI------GDGDSSREFWFQTPP 154
+ +L DT YY+KI G G S F+TP
Sbjct: 70 NRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.7 bits (84), Expect = 0.001
Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 15/111 (13%)
Query: 50 KVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVT 109
+V +P +AP+ T + +A+ ++W P + S + LE +++
Sbjct: 6 RVRQLP---HAPEHPVATLSTVERRAINLTWTKPFDGNSP-LIRYILEMSENNA-----P 56
Query: 110 NYTFYKYKSGYIHHCLVDDLEYDTKYYYKI------GDGDSSREFWFQTPP 154
V L Y +++ G G S++ + P
Sbjct: 57 WTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLP 107
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.0 bits (82), Expect = 0.002
Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 13/117 (11%)
Query: 53 DIPKGHNAPQQVRITQGDYDGKAVIISW-VTPNELGSNRVQYGKLEKKYDSSAEGTVTNY 111
D+P AP VR+ + + W P + +Q ++ S+ +
Sbjct: 12 DLPMV--APGNVRVN--VVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRH 67
Query: 112 TFYKYK--SGYIHHCLVDDLEYDTKYYYKI------GDGDSSREFWFQTPPKIHPDA 160
K G H ++ LE + Y + G+G +S + F TP P +
Sbjct: 68 IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGPSS 124
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 479 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.94 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.93 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.9 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.86 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.85 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.61 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.61 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.25 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.14 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.02 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.99 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.91 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.8 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.65 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.57 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.42 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.1 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.99 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.62 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.45 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.38 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.36 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.34 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.32 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.28 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.23 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.21 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.13 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.12 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.12 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.07 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.05 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.04 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.03 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 97.0 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 96.98 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.97 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.93 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 96.85 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.85 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.81 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.79 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.79 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.75 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.75 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.74 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.73 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 96.72 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.7 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.64 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.63 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.56 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.51 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.51 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.51 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.48 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.46 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 96.42 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.41 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.41 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.39 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.29 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 96.28 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.28 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 96.28 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.27 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.27 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 96.26 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 96.25 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.23 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.23 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 96.2 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.17 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.15 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 96.14 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 96.1 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.07 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.06 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 96.04 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.98 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 95.96 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.88 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 95.86 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.73 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.7 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 95.69 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 95.62 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.61 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.58 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 95.57 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 95.52 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 95.4 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 95.16 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.09 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 94.74 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.56 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 93.82 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 93.65 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 91.83 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 91.34 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 91.32 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 91.14 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 90.99 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 90.9 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 90.31 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 89.96 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 89.95 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 89.07 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 88.91 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 80.71 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=1.8e-63 Score=491.92 Aligned_cols=307 Identities=61% Similarity=1.093 Sum_probs=274.5
Q ss_pred CCCCCeEEEEEecCCCCCChHHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCC
Q 011680 157 HPDAPYTFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (479)
Q Consensus 157 ~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GN 234 (479)
|++.|+||+++||+|.+.+...++.++... +|||||++||++|+++....+ ..+|++|++.++++.+.+|+++++||
T Consensus 3 g~~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~-~~~wd~~~~~~~~~~~~~P~~~~~GN 81 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRWDTWGRFTERSVAYQPWIWTAGN 81 (312)
T ss_dssp CSSCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGC-THHHHHHHHHHHHHHTTSCEEECCCG
T ss_pred CCCCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccc-hHHHHHHHHHHHHHhhcceEEEeccc
Confidence 457899999999999877677777766544 899999999999987755555 78999999999999989999999999
Q ss_pred cccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeE
Q 011680 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWL 314 (479)
Q Consensus 235 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 314 (479)
||++..+..+....+..|..+|.+|..+.....+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+
T Consensus 82 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 161 (312)
T d2qfra2 82 HEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWL 161 (312)
T ss_dssp GGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHTCCTTTCCEE
T ss_pred ccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHHHHHHHHHhhcCCCEE
Confidence 99865544444567788889999998877777788999999999999999998888899999999999999888889999
Q ss_pred EEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCC
Q 011680 315 IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGD 394 (479)
Q Consensus 315 IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~ 394 (479)
||++|+|+|++...+..+.+.+|+.|++||.+++||+||+||+|.|||++||+++++...++.+.+..+++||+||++|+
T Consensus 162 iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G~ 241 (312)
T d2qfra2 162 IVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGD 241 (312)
T ss_dssp EEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECC
T ss_pred EEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEECc
Confidence 99999999998877666778899999999999999999999999999999999998878888888889999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEeCcccChhhh
Q 011680 395 GGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQYWSNNLRR 464 (479)
Q Consensus 395 gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~~~~~~~~ 464 (479)
||+.++....+.+++|.|+++++.+|||++|+|.|+|+|.|+|+++.||++++.|+|||.|++|.|.+++
T Consensus 242 gG~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~~i~~~~~~~~~~~ 311 (312)
T d2qfra2 242 AGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDS 311 (312)
T ss_dssp SCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEEEEECTTTCCCCCC
T ss_pred CCCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEEEEEeCCCCCCCCC
Confidence 9988777677778899999999999999999999999999999999999977779999999999998765
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=3.2e-34 Score=278.97 Aligned_cols=258 Identities=18% Similarity=0.234 Sum_probs=179.9
Q ss_pred CeEEEEEecCCCCCCh----H------HHHH-HHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHH--HHHhhcCC
Q 011680 161 PYTFGIIGDLGQTYNS----L------STLK-HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFI--EQSAAYQP 227 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~----~------~~l~-~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~--~~l~~~~P 227 (479)
++||+++||+|..... . ..+. .+.+.+|||||++||++|.++..... ..+|.++.+.+ ......+|
T Consensus 4 ~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~-~~~~~~~~~~~~~~~~~~~~P 82 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-DKRFQETFEDVFSDPSLRNVP 82 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-CTHHHHHTTTTSCSGGGTTCC
T ss_pred CeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCccc-HHHHHHHHHHHhhhhhhcCCc
Confidence 6999999999876432 1 1222 22334999999999999987744434 55665543322 12346899
Q ss_pred eEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEc------CeEEEEEeecCCC------C------
Q 011680 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRR------ASAHIIVLSSYSP------Y------ 289 (479)
Q Consensus 228 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~------g~v~fi~Lds~~~------~------ 289 (479)
+++++||||+..... ....+..+..++.+|. .||++.+ +.++|+++|+... +
T Consensus 83 ~~~~~GNHD~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~~ 152 (302)
T d1utea_ 83 WHVLAGNHDHLGNVS--AQIAYSKISKRWNFPS--------PYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPE 152 (302)
T ss_dssp EEECCCHHHHHSCHH--HHHHGGGTSTTEECCS--------SSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCC
T ss_pred eEEeecccccccccc--cccchhhccccccCCC--------cccceeecccCCCCcEEEEEccceeEeeccccccccccc
Confidence 999999999753211 0112334444555552 3666654 4799999997421 0
Q ss_pred -----CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 290 -----VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 290 -----~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
..+++|++||+++|++ .+++|+||++|||+++.... ......+..|.++|.+++|++|||||+|.|+|+.
T Consensus 153 ~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~~ 227 (302)
T d1utea_ 153 RPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ 227 (302)
T ss_dssp SCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEE
T ss_pred ccccchhHHHHHHHHHHHHHh---hccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcCceEEEeCCCcceEEEe
Confidence 0137899999999999 56789999999999987643 3366788999999999999999999999999975
Q ss_pred eeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCC---CCCCce-eeeCcccEEEEEEecCceEEEEEEEc
Q 011680 365 RISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDP---QPNYSA-FREASYGHSTLEIKNRTHAFYHWNRN 440 (479)
Q Consensus 365 p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~---~p~~s~-~~~~~~G~~~l~v~~~~~~~~~~~~~ 440 (479)
..+++.||++|+||............ .+.+.. .....+||++++| +.+.++++|+ +
T Consensus 228 ------------------~~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v-~~~~l~~~~~-~ 287 (302)
T d1utea_ 228 ------------------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYI-E 287 (302)
T ss_dssp ------------------CTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEE-E
T ss_pred ------------------cCCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEEE-ECCEEEEEEE-e
Confidence 36788999999998765432211111 111111 1235789999999 5567999986 5
Q ss_pred CCCCeeeeeEEEEEeC
Q 011680 441 DDGNKVTTDSVVFHNQ 456 (479)
Q Consensus 441 ~dg~~~~~D~~~i~~~ 456 (479)
.+|+ ++|++.|.+|
T Consensus 288 ~~G~--~~~~~~~~~~ 301 (302)
T d1utea_ 288 ASGK--SLFKTKLPRR 301 (302)
T ss_dssp TTSC--EEEEEEECCC
T ss_pred CCCC--EEEEEEecCC
Confidence 7999 7899999775
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.94 E-value=7.4e-27 Score=192.88 Aligned_cols=111 Identities=50% Similarity=0.913 Sum_probs=103.2
Q ss_pred CccCcCccccCCCCCCCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEE
Q 011680 44 DIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHH 123 (479)
Q Consensus 44 ~~p~~~~~~~~p~~~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 123 (479)
|+|+++.+|.+|++.++|+||||+++++++++|+|+|.|.+.+..+.|+||++++.+...+.|...+|+..++.++++|+
T Consensus 2 ~~p~~~~~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~ 81 (112)
T d2qfra1 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 81 (112)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEE
T ss_pred CCCCCCccccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEE
Confidence 68999999999999999999999999998899999999987788999999999998899999998888877778899999
Q ss_pred EEecCCCCCcEEEEEeCCCCccceEEEECCC
Q 011680 124 CLVDDLEYDTKYYYKIGDGDSSREFWFQTPP 154 (479)
Q Consensus 124 v~l~gL~p~t~Y~Y~v~~g~~~~~~~F~T~p 154 (479)
|+|+||+|||+|+|||+++..+++++|+|+|
T Consensus 82 v~Lt~L~P~T~Y~YrVG~~~~S~~~~F~T~P 112 (112)
T d2qfra1 82 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112 (112)
T ss_dssp EEECSCCTTCEEEEEECCSSSCEEEEEECCC
T ss_pred EEECCCCCCCEEEEEECCCCceeeEEEEcCC
Confidence 9999999999999999996667899999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.93 E-value=2.1e-25 Score=186.15 Aligned_cols=113 Identities=56% Similarity=1.081 Sum_probs=102.4
Q ss_pred CcCccCcCccccCCCCCCCCceEEEeecCCCCCcEEEEEEcCC-CCCccEEEEEecCCCCcceEEeeEEEEeeeccccce
Q 011680 42 SADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPN-ELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGY 120 (479)
Q Consensus 42 ~~~~p~~~~~~~~p~~~~~P~~v~lt~~~~~~~~~~i~W~t~~-~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (479)
..|+|+++..+..|++.++|+||||+++++++++|+|+|.|.. ..+.+.|+||..++.+...+.|++.+|+..++.++|
T Consensus 6 ~~~~p~~~~~~~~p~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~ 85 (119)
T d1xzwa1 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAF 85 (119)
T ss_dssp HHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCE
T ss_pred ccccCCCCccccCCCCCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCe
Confidence 4589999999999999999999999999998899999999964 346679999999999999999998888877778899
Q ss_pred EEEEEecCCCCCcEEEEEeCCCCccceEEEECCC
Q 011680 121 IHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPP 154 (479)
Q Consensus 121 ~h~v~l~gL~p~t~Y~Y~v~~g~~~~~~~F~T~p 154 (479)
+|+|+|+||+|||+|+|||+++..+++++|||+|
T Consensus 86 ~H~v~LtgL~P~T~Y~YrVG~~~~S~~~~F~T~P 119 (119)
T d1xzwa1 86 IHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119 (119)
T ss_dssp EEEEEECCCCTTCEEEEEECCGGGCEEEEEECCC
T ss_pred EEEEEECCCCCCCEEEEEECCCCccceEEEeCCC
Confidence 9999999999999999999996667899999998
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.90 E-value=6.6e-23 Score=194.72 Aligned_cols=224 Identities=21% Similarity=0.178 Sum_probs=140.0
Q ss_pred CeEEEEEecCCCCCC---------h----HHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-
Q 011680 161 PYTFGIIGDLGQTYN---------S----LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA- 224 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~---------~----~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~- 224 (479)
.+||++++|+|.... . ..+++.+.+. +||+||++||+++.+. ...++.+.+.+.++..
T Consensus 4 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~------~~~~~~~~~~l~~~~~~ 77 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE------PAAYRKLRGLVEPFAAQ 77 (256)
T ss_dssp SEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCC------HHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------hhHHHHHHHHhhhhhhh
Confidence 699999999997532 1 2234445444 7999999999997655 5667777777765542
Q ss_pred -cCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCC----CCHHHHHHH
Q 011680 225 -YQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYV----KYTPQWWWL 299 (479)
Q Consensus 225 -~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~----~~~~Q~~WL 299 (479)
.+|++.++||||.. .. +...+.... .......|++..++++|++|||..... ...+|++||
T Consensus 78 ~~~p~~~v~GNHD~~--------~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~wl 143 (256)
T d2hy1a1 78 LGAELVWVMGNHDDR--------AE---LRKFLLDEA---PSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWL 143 (256)
T ss_dssp HTCEEEECCCTTSCH--------HH---HHHHTTCCC---CCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHHH
T ss_pred cCCCEEEEcccccch--------hh---hhhhhcccc---ccccccceEEEecccceeeeeeeecCCcCCcccHHHHHHH
Confidence 68999999999941 11 122221111 112345788999999999999875422 347899999
Q ss_pred HHHHhhcccCCCCeEEEEecccccccCCCCC-CCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcc
Q 011680 300 REELKKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDR 378 (479)
Q Consensus 300 ~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~-~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~ 378 (479)
++.|++ ...+++||++|||++....... .......+.+..++++++|+++||||+|...+..
T Consensus 144 ~~~L~~---~~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~~-------------- 206 (256)
T d2hy1a1 144 AEELAT---PAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT-------------- 206 (256)
T ss_dssp HHHHTS---CCTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEEE--------------
T ss_pred HHHHHh---hhccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhceE--------------
Confidence 999987 3445789999999976543211 1111124678889999999999999999765432
Q ss_pred cccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCc
Q 011680 379 YPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRT 431 (479)
Q Consensus 379 ~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~ 431 (479)
-+|+.++++|+....... +..+.-........||..++|..++
T Consensus 207 -----~~gi~~~~~~s~~~~~~~-----~~~~~~~~~~~~~~g~~lv~v~~d~ 249 (256)
T d2hy1a1 207 -----FVGIPVSVASATCYTQDL-----TVAAGGTRGRDGAQGCNLVHVYPDT 249 (256)
T ss_dssp -----ETTEEEEECCCCC------------------------CEEEEEECSSC
T ss_pred -----ECCEEEEEcCCccccccc-----cCCCCCcccccCCCCEEEEEEECCC
Confidence 245667776543322110 0111111223446799999986554
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.86 E-value=5.2e-21 Score=183.23 Aligned_cols=181 Identities=15% Similarity=0.169 Sum_probs=120.1
Q ss_pred eEEEEEecCCCCCC---------hH----HHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC
Q 011680 162 YTFGIIGDLGQTYN---------SL----STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (479)
Q Consensus 162 ~~f~~~gD~~~~~~---------~~----~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~ 226 (479)
.+|++++|+|.... .. .+++.+.+. +||+||++||+++.+. ...|+.+.+.++.+ .+
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~------~~~y~~~~~~l~~l--~~ 72 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR------PEEYQVARQILGSL--NY 72 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC------HHHHHHHHHHHTTC--SS
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCc------chhHHHHHHHHhcc--CC
Confidence 37999999997432 12 234444433 8999999999998654 55566666655544 68
Q ss_pred CeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC----CCCHHHHHHHHHH
Q 011680 227 PWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY----VKYTPQWWWLREE 302 (479)
Q Consensus 227 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~----~~~~~Q~~WL~~~ 302 (479)
|+++++||||.. ..+..+...+ .+... .......|.++.++++||+||+.... ...++|++||+++
T Consensus 73 p~~~i~GNHD~~--------~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~ 142 (271)
T d3d03a1 73 PLYLIPGNHDDK--------ALFLEYLQPL-CPQLG-SDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQ 142 (271)
T ss_dssp CEEEECCTTSCH--------HHHHHHHGGG-SGGGC-SCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHH
T ss_pred CEEEEecCccch--------HHHHHHhhhh-hhccc-cccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHH
Confidence 999999999962 1111111111 11000 11124567888899999999997542 2358999999999
Q ss_pred HhhcccCCCCeEEEEecccccccCCCCCC-CCHHHHHHHHHHHHHc-CCcEEEEcccccceee
Q 011680 303 LKKVDREKTPWLIVLMHVPLYSSNVVHYM-EGESMRAVFESWFVHS-RVDFIFAGHVHAYERS 363 (479)
Q Consensus 303 L~~~~~~~~~w~IV~~H~P~~~~~~~~~~-~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yer~ 363 (479)
|++. ..+++||++|||++........ ......++|.++++++ +|+++|+||.|.....
T Consensus 143 L~~~---~~~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (271)
T d3d03a1 143 LFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (271)
T ss_dssp HHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred Hhhh---ccceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhce
Confidence 9984 3456788889998765432211 1112245788899998 6999999999976654
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.85 E-value=7.5e-21 Score=183.21 Aligned_cols=236 Identities=17% Similarity=0.111 Sum_probs=140.1
Q ss_pred eEEEEEecCCCCCC----------------hHHHH----HHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHH
Q 011680 162 YTFGIIGDLGQTYN----------------SLSTL----KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ 221 (479)
Q Consensus 162 ~~f~~~gD~~~~~~----------------~~~~l----~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~ 221 (479)
|||++++|+|.+.. +...+ +.+.+.+|||||++||+++..... . ......+.+..+.
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~--~-~~~~~~~~~~~~~ 80 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRR--R-DASDRALDTVMAE 80 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHH--T-TCHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcc--h-hHHHHHHHHHHHH
Confidence 89999999997521 12223 334445999999999999753210 0 1112223333333
Q ss_pred Hh-hcCCeEEcCCCcccccCCCCCcccccccccccc--cCCcCCCCCCCCceEEEEcCeEEEEEeecCCC----------
Q 011680 222 SA-AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRI--ATPYTASKSTNPLWYAIRRASAHIIVLSSYSP---------- 288 (479)
Q Consensus 222 l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f--~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~---------- 288 (479)
+. ..+|++.++||||..................++ ..............+.+..++.+|+.+++...
T Consensus 81 ~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (320)
T d2nxfa1 81 LDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESE 160 (320)
T ss_dssp HHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSH
T ss_pred HHHcCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCccccccccccccc
Confidence 32 378999999999974321000000000000000 00000011112345667888999999987421
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCC
Q 011680 289 ------------------------------------YVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYME 332 (479)
Q Consensus 289 ------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~ 332 (479)
...+.+|++||+++|+++.+ ...++||++|+|++.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-~~~~viv~~H~p~~~~~~~~~~~ 239 (320)
T d2nxfa1 161 KHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPVHPCAADPICL 239 (320)
T ss_dssp HHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCCCTTSSCGGGS
T ss_pred ccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-cCCceEEEECCCCccCCCCCccc
Confidence 00147899999999988643 34578999999997655432211
Q ss_pred CHHHHHHHHHHHHHc-CCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCC
Q 011680 333 GESMRAVFESWFVHS-RVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPN 411 (479)
Q Consensus 333 ~~~~r~~l~~l~~~~-~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~ 411 (479)
....+++..+|.++ +|+++|+||+|..++.. ..+|+.||++|+.. +.
T Consensus 240 -~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~------------------~~~g~~~i~~~~~~--~~----------- 287 (320)
T d2nxfa1 240 -AWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT------------------DSSGAQHITLEGVI--ET----------- 287 (320)
T ss_dssp -CTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE------------------CTTSCEEEECCCGG--GC-----------
T ss_pred -hhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee------------------ccCCCEEEECCeee--cC-----------
Confidence 12246788889998 59999999999887652 35678888876431 11
Q ss_pred CceeeeCcccEEEEEEecCceEEEEEE
Q 011680 412 YSAFREASYGHSTLEIKNRTHAFYHWN 438 (479)
Q Consensus 412 ~s~~~~~~~G~~~l~v~~~~~~~~~~~ 438 (479)
.....||.+++|..+ .+.++-.
T Consensus 288 ----~~~~~~~~~~~v~~d-~~~~~~~ 309 (320)
T d2nxfa1 288 ----PPHSHAFATAYLYED-RMVMKGR 309 (320)
T ss_dssp ----CTTSCEEEEEEECSS-EEEEEEE
T ss_pred ----CCCCCCEEEEEEECC-EEEEEEe
Confidence 012358899999655 4666543
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.61 E-value=2.6e-15 Score=140.21 Aligned_cols=184 Identities=12% Similarity=0.085 Sum_probs=105.1
Q ss_pred CeEEEEEecCCCCCChHHHH-HHHHHhCCCEEEEcCcccccCCCCCCchhhhHH-----------------------HHH
Q 011680 161 PYTFGIIGDLGQTYNSLSTL-KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWD-----------------------SWG 216 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l-~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~-----------------------~~~ 216 (479)
+.||+++||+|...+..+.+ +.+.+.+||+||++||+++.... ...|. .+.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~ 76 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEAL-----EKEYERAHLARREPNRKVIHENEHYIIETLD 76 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHH-----HHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCC-----CHHHHHHHHhhhhhceeeeccccccchhhHH
Confidence 57999999999776554444 44455599999999999975431 11111 122
Q ss_pred HHHHHHh-hcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC---C--
Q 011680 217 RFIEQSA-AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY---V-- 290 (479)
Q Consensus 217 ~~~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~---~-- 290 (479)
..++.+. ..+|+++++||||..... .....+......+.. ......+.+..+++.|+.+++.... .
T Consensus 77 ~~~~~L~~~~~pv~~i~GNHD~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T d2yvta1 77 KFFREIGELGVKTFVVPGKNDAPLKI-----FLRAAYEAETAYPNI---RVLHEGFAGWRGEFEVIGFGGLLTEHEFEED 148 (257)
T ss_dssp HHHHHHHTTCSEEEEECCTTSCCHHH-----HHHHHHHTTTTCTTE---EECSSEEEEETTTEEEEEECSEEESSCCBSS
T ss_pred HHHHHHHhcCCcEEEEeCCCcchhhH-----HHHHhcccccccccc---ccccceeEEecCCeEEEEeccccCCccccch
Confidence 2334443 268999999999952110 001111111111100 0011233445567778777653211 0
Q ss_pred ----CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCC--CCHHHHHHHHHHHHHcCCcEEEEcccccc
Q 011680 291 ----KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYM--EGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (479)
Q Consensus 291 ----~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~--~~~~~r~~l~~l~~~~~VdlvlsGH~H~y 360 (479)
....+..|++..+++ .+....|+++|+|++.+...... ........+..++++++++++++||+|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~ 221 (257)
T d2yvta1 149 FVLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKG 221 (257)
T ss_dssp SSCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCE
T ss_pred hhhhhhhhHHHHHHHHhhh---cccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCC
Confidence 113344555555554 45567899999999764432111 11112356778889999999999999964
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.61 E-value=1.6e-15 Score=139.17 Aligned_cols=174 Identities=10% Similarity=0.042 Sum_probs=106.0
Q ss_pred CeEEEEEecCCCCCChHHHHHHH----HHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcc
Q 011680 161 PYTFGIIGDLGQTYNSLSTLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHE 236 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l~~~----~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 236 (479)
+-+|+++||+|.. .++++++ .+.++|+||++||+++.+. . ..++..+.+.+.. ...|+++++||||
T Consensus 5 ~~~i~~~sd~hg~---~eale~~~~~~~~~~~D~vv~~GDl~~~~~----~-~~~~~~~~~~L~~--~~~pv~~i~GNHD 74 (228)
T d1uf3a_ 5 VRYILATSNPMGD---LEALEKFVKLAPDTGADAIALIGNLMPKAA----K-SRDYAAFFRILSE--AHLPTAYVPGPQD 74 (228)
T ss_dssp CCEEEEEECCTTC---HHHHHHHHTHHHHHTCSEEEEESCSSCTTC----C-HHHHHHHHHHHGG--GCSCEEEECCTTS
T ss_pred ccEEEEEeCCCCC---HHHHHHHHHHHhhcCCCEEEECCCCCCCCc----c-chHHHHhhhhhcc--ccceEEEEecCCC
Confidence 3478899999865 3444444 3449999999999997654 2 3344444443332 2789999999999
Q ss_pred cccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC----------CCCCHHHHHHHHHHHhhc
Q 011680 237 IEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP----------YVKYTPQWWWLREELKKV 306 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~----------~~~~~~Q~~WL~~~L~~~ 306 (479)
...... ....+......+.. ......+.+..+++.++.++.... ......|..|+++.++..
T Consensus 75 ~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 146 (228)
T d1uf3a_ 75 APIWEY-----LREAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL 146 (228)
T ss_dssp CSHHHH-----HHHHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGS
T ss_pred chhhhh-----hhhhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhc
Confidence 531100 00001000000000 001123456677788887765321 112367889999988873
Q ss_pred ccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccc
Q 011680 307 DREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (479)
Q Consensus 307 ~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~y 360 (479)
...+.|+++|+|++.....+.+ . ..+.+++++++++++++||+|..
T Consensus 147 ---~~~~~il~~H~p~~~~~~~~~~-~----~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 147 ---KDYPKIFLFHTMPYHKGLNEQG-S----HEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp ---CSCCEEEEESSCBCBTTTBTTS-B----HHHHHHHHHHCCSEEEECCSSCE
T ss_pred ---cCCceEEEEeeeccCccccccc-c----HHHHHHHHhcCCcEEEEcccccc
Confidence 4456799999999765433221 1 34666788999999999999964
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.25 E-value=5.5e-10 Score=99.94 Aligned_cols=185 Identities=16% Similarity=0.196 Sum_probs=106.5
Q ss_pred EEEEEecCCCCCChH---HHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccc
Q 011680 163 TFGIIGDLGQTYNSL---STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~---~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 238 (479)
=++++||+|...... ..+..+.+. ++|.||++||++. . +..+.++.+ ..+++.|.||||..
T Consensus 5 lIlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~---------~----~~l~~l~~l--~~~v~~V~GN~D~~ 69 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS---------Q----EYVEMLKNI--TKNVYIVSGDLDSA 69 (193)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC---------H----HHHHHHHHH--CSCEEECCCTTCCS
T ss_pred EEEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCC---------H----HHHHHHHhh--CCCEEEEcCCCCcc
Confidence 378999999753322 344455444 8999999999973 1 122333333 34788999999953
Q ss_pred cCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEe
Q 011680 239 FMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~ 318 (479)
... .-..+... +| ..-.+.+++ ++|.+.
T Consensus 70 ~~~------~~~~~~~~--lp---------~~~~~~~~~-----------------------------------~~i~l~ 97 (193)
T d2a22a1 70 IFN------PDPESNGV--FP---------EYVVVQIGE-----------------------------------FKIGLM 97 (193)
T ss_dssp CCB------CCGGGTBC--CC---------SEEEEEETT-----------------------------------EEEEEE
T ss_pred hhh------hhHHHHhh--CC---------ccEEEEECC-----------------------------------EEEEEE
Confidence 210 00111111 12 122232222 455666
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCC
Q 011680 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQ 398 (479)
Q Consensus 319 H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~ 398 (479)
|...+.... . .+.+..++.+.++|++++||+|...... -+++++|-.|+-|.+
T Consensus 98 H~~~~~~~~-----~---~~~l~~~~~~~~~dvvi~GHTH~~~~~~-------------------~~g~~~iNPGSvg~p 150 (193)
T d2a22a1 98 HGNQVLPWD-----D---PGSLEQWQRRLDCDILVTGHTHKLRVFE-------------------KNGKLFLNPGTATGA 150 (193)
T ss_dssp CSTTSSSTT-----C---HHHHHHHHHHHTCSEEEECSSCCCEEEE-------------------ETTEEEEECCCSSCC
T ss_pred eccCCCCCC-----C---HHHHHHHHhhcCCCEEEEcCccCceEEE-------------------ECCEEEEECCCCCcC
Confidence 654332111 1 2456677888899999999999854321 245677777887755
Q ss_pred CCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEe
Q 011680 399 EGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHN 455 (479)
Q Consensus 399 ~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 455 (479)
... ... +....|++|++.++ .+.+++++-++|+ +-++.+.++|
T Consensus 151 r~~--~~~----------~~~~syaild~~~~-~v~v~~y~l~~~~-~~~~~~~~~~ 193 (193)
T d2a22a1 151 FSA--LTP----------DAPPSFMLMALQGN-KVVLYVYDLRDGK-TNVAMSEFSK 193 (193)
T ss_dssp CCT--TST----------TCCCEEEEEEEETT-EEEEEEEEEETTE-EEEEEEEEEC
T ss_pred cCC--CCC----------CCCCEEEEEEEECC-EEEEEEEEecCCe-EEEEEEEEeC
Confidence 321 001 11247899999654 5777776655565 4666666554
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.14 E-value=1.2e-09 Score=96.67 Aligned_cols=177 Identities=14% Similarity=0.116 Sum_probs=105.5
Q ss_pred eEEEEEecCCCCCChH---HHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNSL---STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~---~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.+++++||+|.+.... ..+.++.+. ++|.|+++||++.. +..+.++.+ ..|++.|.||||.
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~~-------------e~l~~l~~~--~~~v~~V~GN~D~ 65 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK-------------ESYDYLKTL--AGDVHIVRGDFDE 65 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH-------------HHHHHHHHH--CSEEEECCCTTCC
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccch-------------hhHHHHHhh--CCceEEEeCCcCc
Confidence 3799999999754321 334443333 79999999999731 122333333 3578999999995
Q ss_pred ccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEE
Q 011680 238 EFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVL 317 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~ 317 (479)
.. ..|. .-.++++ .++|.+
T Consensus 66 ~~-----------------~~p~---------~~~~~~~-----------------------------------g~~i~~ 84 (182)
T d1z2wa1 66 NL-----------------NYPE---------QKVVTVG-----------------------------------QFKIGL 84 (182)
T ss_dssp CT-----------------TSCS---------EEEEEET-----------------------------------TEEEEE
T ss_pred cc-----------------ccce---------EEEEEEc-----------------------------------CcEEEE
Confidence 21 1121 0111111 145667
Q ss_pred ecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCC
Q 011680 318 MHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGN 397 (479)
Q Consensus 318 ~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~ 397 (479)
+|.+.+..... .+.+..++.+.++|++++||+|...-.. -+++++|-.|+.|.
T Consensus 85 ~Hg~~~~~~~~--------~~~l~~~~~~~~~divi~GHTH~p~~~~-------------------~~~~~~iNPGSv~~ 137 (182)
T d1z2wa1 85 IHGHQVIPWGD--------MASLALLQRQFDVDILISGHTHKFEAFE-------------------HENKFYINPGSATG 137 (182)
T ss_dssp ECSCCCCBTTC--------HHHHHHHHHHHSSSEEECCSSCCCEEEE-------------------ETTEEEEECCCTTC
T ss_pred EeCCCCCCCCC--------HHHHHHHHhccCCCEEEECCcCcceEEE-------------------ECCEEEEeCCCCCC
Confidence 77665432211 2355566778899999999999754321 24567777888776
Q ss_pred CCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEe
Q 011680 398 QEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHN 455 (479)
Q Consensus 398 ~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 455 (479)
+.... ..++ ...|++|++.++ .+....++-+++ .|..+.+.++|
T Consensus 138 pr~~~--~~~~----------~~syaild~~~~-~v~~~~~~l~~~-~v~~~~~~~~~ 181 (182)
T d1z2wa1 138 AYNAL--ETNI----------IPSFVLMDIQAS-TVVTYVYQLIGD-DVKVERIEYKK 181 (182)
T ss_dssp CCCSS--CSCC----------CCEEEEEEEETT-EEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCCC--CCCC----------CCEEEEEEEeCC-EEEEEEEEecCC-cEEEEEEEEEc
Confidence 53210 0111 236899999654 466665553444 46788888776
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.02 E-value=5.4e-10 Score=107.45 Aligned_cols=73 Identities=19% Similarity=0.218 Sum_probs=49.3
Q ss_pred eEEEEEecCCCCCCh----------HHHHHHH----HHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-hcC
Q 011680 162 YTFGIIGDLGQTYNS----------LSTLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQ 226 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~----------~~~l~~~----~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-~~~ 226 (479)
.||+++||+|.+... ...++++ .+.++|+||++||+++.... . ......+.+.+..+. ..+
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~---~-~~~~~~~~~~~~~l~~~~i 76 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRP---S-PGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSC---C-HHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCC---C-HHHHHHHHHHHhhHHhcCC
Confidence 489999999986431 2234433 34499999999999875431 1 222334455566654 368
Q ss_pred CeEEcCCCcccc
Q 011680 227 PWIWSAGNHEIE 238 (479)
Q Consensus 227 P~~~v~GNHD~~ 238 (479)
|++.++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (333)
T d1ii7a_ 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCCCccc
Confidence 999999999964
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.99 E-value=9.6e-10 Score=101.46 Aligned_cols=68 Identities=7% Similarity=0.007 Sum_probs=45.6
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCc
Q 011680 162 YTFGIIGDLGQTYNS-LSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~-~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 235 (479)
++++++||+|..... ...++.+.+. ++|.+|++||+++.+. + . .+..+.+..+....++++++|||
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~----~--~--~evi~~l~~l~~~~~v~~v~GNH 72 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFP----Y--P--KEVIEVIKDLTKKENVKIIRGKY 72 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSS----C--H--HHHHHHHHHHHHHSCEEEECCHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCC----C--c--HHHHHHHHHHhhcCCEEEEeccH
Confidence 589999999954222 2333444322 5699999999997654 1 1 23445555555567899999999
Q ss_pred cc
Q 011680 236 EI 237 (479)
Q Consensus 236 D~ 237 (479)
|.
T Consensus 73 D~ 74 (251)
T d1nnwa_ 73 DQ 74 (251)
T ss_dssp HH
T ss_pred HH
Confidence 95
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.91 E-value=4.5e-08 Score=85.57 Aligned_cols=157 Identities=14% Similarity=0.121 Sum_probs=98.5
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHH---hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 161 PYTFGIIGDLGQTYNSLSTLKHYMQ---SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l~~~~~---~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
..||+++||+|.. ...++++.+ .++|.|+++||+.+... .. ...++.+|.||||.
T Consensus 3 ~~kI~viSD~Hgn---~~al~~vl~~~~~~~D~iih~GD~~~~~~------~~-------------~~~~~~~V~GN~D~ 60 (173)
T d3ck2a1 3 KQTIIVMSDSHGD---SLIVEEVRDRYVGKVDAVFHNGDSELRPD------SP-------------LWEGIRVVKGNMDF 60 (173)
T ss_dssp CEEEEEECCCTTC---HHHHHHHHHHHTTTSSEEEECSCCCSCTT------CG-------------GGTTEEECCCTTCC
T ss_pred CCEEEEEeccCCC---HHHHHHHHHHhhcCCCEEEECCcccCccc------ch-------------hhcCCeEEecCccc
Confidence 4799999999954 334444443 27999999999886543 11 12478899999995
Q ss_pred ccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEE
Q 011680 238 EFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVL 317 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~ 317 (479)
.. ..|. ...++++ ..+|.+
T Consensus 61 ~~-----------------~~~~---------~~~~~~~-----------------------------------~~~~~~ 79 (173)
T d3ck2a1 61 YA-----------------GYPE---------RLVTELG-----------------------------------STKIIQ 79 (173)
T ss_dssp ST-----------------TCCS---------EEEEEET-----------------------------------TEEEEE
T ss_pred cc-----------------ccce---------EEEEEEC-----------------------------------CEEEEE
Confidence 21 0111 1112222 245667
Q ss_pred ecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCC
Q 011680 318 MHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGN 397 (479)
Q Consensus 318 ~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~ 397 (479)
.|...+..... . +.+..++.+.++|++++||+|...... .+++++|-.|+-|.
T Consensus 80 ~Hg~~~~~~~~----~----~~l~~~~~~~~~dvvi~GHTH~p~~~~-------------------~~~~~~iNPGSvg~ 132 (173)
T d3ck2a1 80 THGHLFDINFN----F----QKLDYWAQEEEAAICLYGHLHVPSAWL-------------------EGKILFLNPGSISQ 132 (173)
T ss_dssp ECSGGGTTTTC----S----HHHHHHHHHTTCSEEECCSSCCEEEEE-------------------ETTEEEEEECCSSS
T ss_pred EeCcCCCCCCC----H----HHHHHHHHhcCCCEEEeCCcCcceEEE-------------------ECCEEEEECCCCCC
Confidence 77655543211 1 245566778899999999999755332 24678888898886
Q ss_pred CCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCC
Q 011680 398 QEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGN 444 (479)
Q Consensus 398 ~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~ 444 (479)
+... .+ ...|++|++.+ ..+.++|+ +.|++
T Consensus 133 pr~~-----~~----------~~syail~~~~-~~~~v~~~-~~d~~ 162 (173)
T d3ck2a1 133 PRGT-----IR----------ECLYARVEIDD-SYFKVDFL-TRDHE 162 (173)
T ss_dssp CCTT-----CC----------SCCEEEEEECS-SEEEEEEE-CTTSC
T ss_pred CCCC-----CC----------CCEEEEEEEeC-CEEEEEEE-EeCCe
Confidence 5321 11 23679999855 46788886 46676
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.80 E-value=1.9e-08 Score=87.25 Aligned_cols=60 Identities=17% Similarity=0.249 Sum_probs=41.6
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-hcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~-~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~ 237 (479)
.|++++||+|..... .++++.+.+.++|.|+++||++.. . .++.+. ...|++.+.||||.
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~---------~-------~~~~l~~~~~~~~~v~GN~D~ 62 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL---------F-------VIKEFENLNANIIATYGNNDG 62 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST---------H-------HHHHGGGCSSEEEEECCTTCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH---------H-------HHHHHhhcCccEEEEcccccc
Confidence 389999999965322 234455555699999999999842 1 122222 25689999999995
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=5.7e-07 Score=86.91 Aligned_cols=187 Identities=16% Similarity=0.094 Sum_probs=93.0
Q ss_pred CCeEEEEEecCCCCCC--------h---HHHHHHHHH----hCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh
Q 011680 160 APYTFGIIGDLGQTYN--------S---LSTLKHYMQ----SGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (479)
Q Consensus 160 ~~~~f~~~gD~~~~~~--------~---~~~l~~~~~----~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~ 223 (479)
..++|+.++|+|.... . ...++.+.+ .+++ ++|.+||++....+ .. ........+.|..+
T Consensus 7 ~~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~--s~-~~~g~~~~~~mn~~- 82 (337)
T d1usha2 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE--SD-LQDAEPDFRGMNLV- 82 (337)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHH--HH-TTTTHHHHHHHHHH-
T ss_pred eEEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHH--HH-HhCChHHHHHHHhc-
Confidence 3589999999985321 1 123444443 3555 55669999854221 01 11122233334333
Q ss_pred hcCCeEEcCCCcccccCCCCCcccccccccccccCCcCC-------CC-CCCCceEEEEcCeEE--EEEeecCCC-----
Q 011680 224 AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA-------SK-STNPLWYAIRRASAH--IIVLSSYSP----- 288 (479)
Q Consensus 224 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~-------~~-~~~~~yysf~~g~v~--fi~Lds~~~----- 288 (479)
. .=..++||||+++.. ..+..+......|.-. .+ ..-..|.-++.++++ ||.+-+...
T Consensus 83 -g-~Da~~~GNHEfd~G~-----~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~ 155 (337)
T d1usha2 83 -G-YDAMAIGNHEFDNPL-----TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN 155 (337)
T ss_dssp -T-CCEEECCGGGGSSCH-----HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSS
T ss_pred -C-CeEEEechhhhccch-----HHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccC
Confidence 1 225678999986531 1122222222223110 00 012335567788755 466644221
Q ss_pred --CCC------CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccc
Q 011680 289 --YVK------YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (479)
Q Consensus 289 --~~~------~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~y 360 (479)
... ..+..+...++|++. .+...+|+++|.+............. ...+...+...+||+++.||.|..
T Consensus 156 ~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~~--~~~la~~~~~~~vD~IvgGHsH~~ 231 (337)
T d1usha2 156 PEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAPG--DVEMARALPAGSLAMIVGGHSQDP 231 (337)
T ss_dssp CCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCCC--HHHHHHHSCTTSSSEEECCSSCCB
T ss_pred cccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccch--hHHHHHhCcccCceEEecCccCcc
Confidence 001 123333333445432 46789999999987543321111111 123333344458999999999975
Q ss_pred e
Q 011680 361 E 361 (479)
Q Consensus 361 e 361 (479)
.
T Consensus 232 ~ 232 (337)
T d1usha2 232 V 232 (337)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.57 E-value=2.4e-07 Score=81.95 Aligned_cols=46 Identities=20% Similarity=0.280 Sum_probs=34.9
Q ss_pred eEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 313 w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
-+|+++|.|+....... .......+..+..+.+++++|+||+|...
T Consensus 107 ~~i~l~H~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 107 KRILLSHYPAKDPITER---YPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp EEEEEESSCSSCSSCCS---CHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred eEEEEEeCCCccccccc---cccchhHHHHHHHhcCceEEEEeeccCCc
Confidence 36899999996544322 23455677889999999999999999654
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.42 E-value=8.1e-07 Score=77.70 Aligned_cols=74 Identities=18% Similarity=0.143 Sum_probs=44.1
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~-~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||+|..... ...++.+.+.++|.+|++||++..+..+............+.+.. ...|++.+.||||.
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~GNhD~ 76 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNE--VAHKVIAVRGNCDS 76 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHT--TGGGEEECCCTTCC
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHh--cCCcEEEecCCCCc
Confidence 489999999954222 233344444599999999999965442211101111122222222 24589999999995
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.10 E-value=6.1e-06 Score=78.95 Aligned_cols=183 Identities=16% Similarity=0.157 Sum_probs=89.2
Q ss_pred CCCeEEEEEecCCCCCC--------------hHHHHHHHH---H-hCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHH
Q 011680 159 DAPYTFGIIGDLGQTYN--------------SLSTLKHYM---Q-SGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~--------------~~~~l~~~~---~-~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~ 219 (479)
-..++|+++.|+|.... .......+. + .+++ ++|.+||++....+.... ..+. ..+
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~-~~~G----~~~ 83 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDIT-SPNG----LKS 83 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSS-SSTT----TTT
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhc-ccCC----hHH
Confidence 35799999999985211 112223332 2 2566 566799999754311000 0011 122
Q ss_pred HHHhhcCCe-EEcCCCcccccCCCCCcccccccccccccCCcCCC--------C---CCCCceEEEEcC--eEEEEEeec
Q 011680 220 EQSAAYQPW-IWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS--------K---STNPLWYAIRRA--SAHIIVLSS 285 (479)
Q Consensus 220 ~~l~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~--------~---~~~~~yysf~~g--~v~fi~Lds 285 (479)
-.++..+++ .+++||||+++.... ...+......+..|.-.+ + .....|..+..+ ++.++++..
T Consensus 84 ~~~mn~lgyDa~t~GNHEfd~g~~~--l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~ 161 (322)
T d3c9fa2 84 TPIFIKQDYDLLTIGNHELYLWENS--KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGF 161 (322)
T ss_dssp HHHHTTSCCSEECCCGGGSSSHHHH--HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEEC
T ss_pred HHHHhccCCcEEeecceecccchHH--HHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEee
Confidence 233445555 789999998542110 001111112222232111 0 012345566665 478888766
Q ss_pred CCCCC---CC--------HHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCc-EE
Q 011680 286 YSPYV---KY--------TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVD-FI 352 (479)
Q Consensus 286 ~~~~~---~~--------~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~Vd-lv 352 (479)
..... .+ ..+..|+++.++ .+..-+|+++|.++-... . ........+.+.. +++ ++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~------~-~~~~~~~~la~~~~~~~~~i 230 (322)
T d3c9fa2 162 LFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW------G-EFYQVHQYLRQFFPDTIIQY 230 (322)
T ss_dssp CCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT------C-HHHHHHHHHHHHCTTSEEEE
T ss_pred ccccccCCCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc------c-ccchHHHHHHHhCCCCCEEE
Confidence 43321 11 112234444433 467889999999863221 1 1111222222332 344 68
Q ss_pred EEccccc
Q 011680 353 FAGHVHA 359 (479)
Q Consensus 353 lsGH~H~ 359 (479)
|.||.|.
T Consensus 231 igGHsH~ 237 (322)
T d3c9fa2 231 FGGHSHI 237 (322)
T ss_dssp EECSSCC
T ss_pred ecccccc
Confidence 9999996
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.99 E-value=8e-05 Score=70.21 Aligned_cols=173 Identities=14% Similarity=0.056 Sum_probs=88.4
Q ss_pred CeEEEEEecCCCCCC---------------h---HHHHHHHHHhCC-CEEEEcCcccccCCCCCCchhhhHHHHHHHHHH
Q 011680 161 PYTFGIIGDLGQTYN---------------S---LSTLKHYMQSGG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ 221 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~---------------~---~~~l~~~~~~~p-D~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~ 221 (479)
.++|+.++|+|..-. . ...++++.+.++ -++|-+||++.... ...+..-...++.
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~------~~~~~~g~~~~~~ 75 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTL------YFNQYRGLADRYF 75 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSH------HHHHHTTHHHHHH
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCH------hHhhhcchhHHHH
Confidence 478999999985321 1 123444544444 47888999986532 1111111112222
Q ss_pred HhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCC----------CCCCCCceEEEEcCeEEE--EEeecCCC-
Q 011680 222 SAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA----------SKSTNPLWYAIRRASAHI--IVLSSYSP- 288 (479)
Q Consensus 222 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~----------~~~~~~~yysf~~g~v~f--i~Lds~~~- 288 (479)
+..--.=..++||||+++... .+..+.....+|.-. ....-..|.-++.+++++ |.+-+...
T Consensus 76 ~n~~gyDa~~~GNHEfd~G~~-----~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~ 150 (302)
T d2z1aa2 76 MHRLRYRAMALGNHEFDLGPG-----PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTR 150 (302)
T ss_dssp HHHTTCCEEECCGGGGTTCHH-----HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHH
T ss_pred HHhcccccccccchhhhcChh-----HHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccc
Confidence 212234478999999865421 111111111112100 001123366678888665 44433210
Q ss_pred ----------CCCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEccc
Q 011680 289 ----------YVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHV 357 (479)
Q Consensus 289 ----------~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~ 357 (479)
+....+..++..+.|++ .+.+-+|++.|..... -..+.++. ++|++++||.
T Consensus 151 ~~~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~~---------------d~~la~~~~giD~ii~gh~ 212 (302)
T d2z1aa2 151 EISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE---------------DLKLARRLVGVQVIVGGHS 212 (302)
T ss_dssp HHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH---------------HHHHHTTCSSCCEEEECSS
T ss_pred ccccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcch---------------hhHHHhcCCCeeeeecCcc
Confidence 01113334455555554 5677899999997421 01233333 6999999999
Q ss_pred cccee
Q 011680 358 HAYER 362 (479)
Q Consensus 358 H~yer 362 (479)
|..-.
T Consensus 213 h~~~~ 217 (302)
T d2z1aa2 213 HTLLG 217 (302)
T ss_dssp CCCBS
T ss_pred ceeec
Confidence 97543
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.62 E-value=7.3e-05 Score=56.99 Aligned_cols=69 Identities=23% Similarity=0.376 Sum_probs=44.7
Q ss_pred CcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC----C--C
Q 011680 74 KAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD----G--D 143 (479)
Q Consensus 74 ~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~----g--~ 143 (479)
+++.|.|..+...+ .-.|+|....+.......+. ...++|++|+|+|.|.+||.. | .
T Consensus 15 ~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~ 81 (93)
T d1x4xa1 15 TCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGP-------------GLSYEIKGLSPATTYYCRVQALSVVGAGP 81 (93)
T ss_dssp TEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEES-------------CSEEEEESCCSSCEEEEEEEEECSSCCCC
T ss_pred CeEEEEEEecccCCCeeEEEEEEEccCCCcceEeecCC-------------ccEEEEcccceeeEEEEEEEEEECCcCcC
Confidence 68999998654322 23566766554433222221 123578999999999999864 3 3
Q ss_pred ccceEEEECCCC
Q 011680 144 SSREFWFQTPPK 155 (479)
Q Consensus 144 ~~~~~~F~T~p~ 155 (479)
.++...|+|+|.
T Consensus 82 ~S~~~~~~Tpps 93 (93)
T d1x4xa1 82 FSEVVACVTPPS 93 (93)
T ss_dssp BCCCEEEECCCC
T ss_pred CCCcEEEEeCCC
Confidence 456788999873
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.45 E-value=0.00015 Score=55.50 Aligned_cols=79 Identities=14% Similarity=0.232 Sum_probs=48.8
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC-CCcc----EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE-LGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~-~~~~----~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..|.+.-.+. +++.|+|..... .... .|+|....+. ..... . ..+++|+||+|+|
T Consensus 4 ~~p~~L~~~~~~~--~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~--~~~~~-----------~--~t~~~i~~L~p~t 66 (94)
T d1x5aa1 4 LSGLSLKLVKKEP--RQLELTWAGSRPRNPGGNLSYELHVLNQDEE--WHQMV-----------L--EPRVLLTKLQPDT 66 (94)
T ss_dssp CCSCCCCEEEEET--TEEEEECCCCCSSCCSSCCEEEEEEECSSCE--EEEEE-----------S--SSEEEEESCCSSC
T ss_pred CCCCceEEEEcCC--CEEEEEEecccCCCCCcEEEEEEEEecCCce--EEEee-----------c--cCEEEECCCCCCC
Confidence 3566677775553 699999986532 2222 3344333221 00000 0 1246899999999
Q ss_pred EEEEEeCC------CCccceEEEECCC
Q 011680 134 KYYYKIGD------GDSSREFWFQTPP 154 (479)
Q Consensus 134 ~Y~Y~v~~------g~~~~~~~F~T~p 154 (479)
.|.+||.. |..++...|+|.|
T Consensus 67 ~Y~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 67 TYIVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 99999864 4456788999987
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.38 E-value=0.00061 Score=51.63 Aligned_cols=80 Identities=19% Similarity=0.395 Sum_probs=50.5
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..+.+.... .+++.|.|......+ .-.|+|....+...... . ......++.|++|+|+|.|
T Consensus 3 ~P~~~~~~~~~--~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~-----~------~~~~~~~~~i~~L~p~t~Y 69 (93)
T d2vkwa2 3 APKLEGQMGED--GNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI-----R------LPSGSDHVMLKSLDWNAEY 69 (93)
T ss_dssp CCEEEEEECTT--SSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCE-----E------ECTTCCEEEECSCCTTCEE
T ss_pred CCccCEeEEcC--CCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeee-----e------ccCCceEEEEeccccceEE
Confidence 67666665433 469999999875332 34677877654322111 0 1122335789999999999
Q ss_pred EEEeCC----C--CccceEEEECC
Q 011680 136 YYKIGD----G--DSSREFWFQTP 153 (479)
Q Consensus 136 ~Y~v~~----g--~~~~~~~F~T~ 153 (479)
.+||.. | ..+ ...|+|.
T Consensus 70 ~~~V~A~N~~G~s~ps-~~~~~T~ 92 (93)
T d2vkwa2 70 EVYVVAENQQGKSKAA-HFVFRTA 92 (93)
T ss_dssp EEEEEEEETTEECCCE-EEEEECC
T ss_pred EEEEEEEcCCCCcCCE-eEEEEec
Confidence 999875 3 333 5678875
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=0.00025 Score=53.91 Aligned_cols=82 Identities=22% Similarity=0.267 Sum_probs=47.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCCc-----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELGS-----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~~-----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
+|..+.+...+ .+++.|+|..+..... -.++|.............. .....++|+||+|+|.
T Consensus 3 ~P~~~~v~~~~--~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~-----------~~~~~~~v~~L~p~t~ 69 (96)
T d1x5xa1 3 MPASPVLTKAG--ITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD-----------GEDLAYTVKNLRRSTK 69 (96)
T ss_dssp CCCCCEEEEEC--SSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE-----------ESCSEEEEESCCSSCE
T ss_pred cCCCCEEEEec--CCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeec-----------CCCCEEEECCCCCCCE
Confidence 44555555433 3699999987542221 1344433332222211111 0112467899999999
Q ss_pred EEEEeCC----CC--ccceEEEECCC
Q 011680 135 YYYKIGD----GD--SSREFWFQTPP 154 (479)
Q Consensus 135 Y~Y~v~~----g~--~~~~~~F~T~p 154 (479)
|.+||.. |. .+....|+|.|
T Consensus 70 Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 70 YKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 9999874 43 35677899987
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.34 E-value=0.00039 Score=53.14 Aligned_cols=84 Identities=18% Similarity=0.216 Sum_probs=55.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC--CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~--~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
+|.++.++......+++.|+|..+... ..-.|+|....+...... .. .++-...++|+||+|||.|..
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~------~~----v~~~~~~~~l~gL~P~t~Y~v 71 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE------AT----IPGHLNSYTIKGLKPGVVYEG 71 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEE------EE----ECSSCCEEEECSCCSSEEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceeee------ec----cCCCccEEEECCcccCcEEEE
Confidence 688888887655458999999987421 234778877654322111 10 123345679999999999999
Q ss_pred EeCC----CCcc-ceEEEECC
Q 011680 138 KIGD----GDSS-REFWFQTP 153 (479)
Q Consensus 138 ~v~~----g~~~-~~~~F~T~ 153 (479)
+|.. |.+. -...|+|.
T Consensus 72 ~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 72 QLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp EEEEEESSSCEEEEEEEEEEC
T ss_pred EEEEEeCCCccCcEEEEEEec
Confidence 9875 4332 26678774
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.32 E-value=0.0013 Score=49.23 Aligned_cols=72 Identities=18% Similarity=0.215 Sum_probs=48.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|..+.++.... +++.|+|..+... ..-.|+|....+......... ...+-...++|+||+|+|.|.++
T Consensus 3 aP~~l~v~~~~~--~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~~ 72 (92)
T d1tdqa2 3 APKNLRVGSRTA--TSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGVG 72 (92)
T ss_dssp CCEEEEEEEECS--SCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEEE
T ss_pred cCcCCEEEEecC--CEEEEEEEecCCcccceEEEEEEcCCCcceeeEEE--------ecCCCeeEEEECCccCCCEEEEE
Confidence 688888876543 6999999886533 345678887654322111110 12234567799999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 73 V~a 75 (92)
T d1tdqa2 73 ISA 75 (92)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00068 Score=51.05 Aligned_cols=82 Identities=17% Similarity=0.179 Sum_probs=52.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..+.+.... .+++.|+|.-+... ..-.|+|............. ......+.|++|+|+|.|.+
T Consensus 3 ~aP~n~~~~~~s--~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~ 69 (92)
T d1qg3a1 3 GAPQNPNAKAAG--SRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLL-----------DSKVPSVELTNLYPYCDYEM 69 (92)
T ss_dssp CCCEEEEEEECS--TTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEE-----------EESSSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEcc--CCEEEEEEEecCCCccceEEeeeeccccccEEEEe-----------cCCccEEEECCCCCCcEEEE
Confidence 367788877544 36999999976432 33467787665432221111 11223578899999999999
Q ss_pred EeCC------CCccceEEEECC
Q 011680 138 KIGD------GDSSREFWFQTP 153 (479)
Q Consensus 138 ~v~~------g~~~~~~~F~T~ 153 (479)
||.. |..|....++|+
T Consensus 70 ~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 70 KVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp EEEEECSSCBCCCCCCEEEECC
T ss_pred EEEEEeCCcCcCCCCCEEEEcC
Confidence 9874 334556677774
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=0.00046 Score=52.98 Aligned_cols=81 Identities=17% Similarity=0.307 Sum_probs=51.5
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
.|..+.+...+ .+++.|.|..+.... .-.|+|....+....... . .......+|+||+|+|.|
T Consensus 6 ~p~~~~~~~~s--~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~-----~------~~~~~~~~i~~L~p~t~Y 72 (98)
T d1x5la1 6 QVVVIRQERAG--QTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----L------KAVTTRATVSGLKPGTRY 72 (98)
T ss_dssp CCCCEECSCBC--SSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----E------EESSSEEEECSCCTTCEE
T ss_pred CCCceEEEecc--CCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEE-----e------cCCceEEEECCCCCCCEE
Confidence 56666666544 369999999765332 235777765543222111 0 011245689999999999
Q ss_pred EEEeCC------CCccceEEEECC
Q 011680 136 YYKIGD------GDSSREFWFQTP 153 (479)
Q Consensus 136 ~Y~v~~------g~~~~~~~F~T~ 153 (479)
.+||.. |..++...|+|.
T Consensus 73 ~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 73 VFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EECEEEEETTEECCCCCCEEEECC
T ss_pred EEEEEEEcCCCCcCCCCCEEEEcC
Confidence 999864 445667788885
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.21 E-value=0.0004 Score=54.18 Aligned_cols=87 Identities=24% Similarity=0.412 Sum_probs=53.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCCc----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..+.+.......+++.|+|..+..... -.|.|....+...... ..... .+-.....|++|+|+|.|
T Consensus 14 pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~--~~~~~------~~~~~~~~i~~L~p~t~Y 85 (111)
T d1x5ka1 14 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDW--VIEPV------VGNRLTHQIQELTLDTPY 85 (111)
T ss_dssp CCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTS--EEEEE------STTCSEEEECSCCSSSEE
T ss_pred CCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCccee--EEEEe------CCCeeEEEECCCCCCCEE
Confidence 57778877654445799999997643322 2556655443221100 00011 122335678999999999
Q ss_pred EEEeCC------CCccceEEEECCC
Q 011680 136 YYKIGD------GDSSREFWFQTPP 154 (479)
Q Consensus 136 ~Y~v~~------g~~~~~~~F~T~p 154 (479)
.+||.. |..|+...|+|+.
T Consensus 86 ~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 86 YFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp EEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEcCCCCcCCCCCEEEECCC
Confidence 999874 3456678898875
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.13 E-value=0.00098 Score=51.93 Aligned_cols=84 Identities=20% Similarity=0.275 Sum_probs=53.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-C----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-G----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..|.+.... .+++.|+|.-+... . .-.|.|............. .......++|++|+|+|
T Consensus 12 ~~P~~l~~~~~~--~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~L~p~t 79 (107)
T d1x5fa1 12 SAPRDVVASLVS--TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENT----------SHPGEMQVTIQNLMPAT 79 (107)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEEC----------SSTTCSEEEECSCCTTC
T ss_pred cCCCccEEEEec--CCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEEE----------eCCCccEEEecCCCCCC
Confidence 478888877654 36999999865321 1 2366666544332221110 12234568999999999
Q ss_pred EEEEEeCC----CC--ccceEEEECCC
Q 011680 134 KYYYKIGD----GD--SSREFWFQTPP 154 (479)
Q Consensus 134 ~Y~Y~v~~----g~--~~~~~~F~T~p 154 (479)
+|.+||.. |. .+....++|.|
T Consensus 80 ~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 80 VYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 99999874 43 35577788876
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.12 E-value=0.00058 Score=52.40 Aligned_cols=70 Identities=23% Similarity=0.365 Sum_probs=43.8
Q ss_pred CCcEEEEEEcCCCC-----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC----C-
Q 011680 73 GKAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD----G- 142 (479)
Q Consensus 73 ~~~~~i~W~t~~~~-----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~----g- 142 (479)
.+++.|+|..+... ..-.|+|..........+ +. +...+++|++|+|++.|.+||.. |
T Consensus 16 ~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~------~~------~~~~~~~v~~L~p~t~Y~frV~A~N~~G~ 83 (97)
T d2crza1 16 AKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV------YQ------GSEVECTVSSLLPGKTYSFRLRAANKMGF 83 (97)
T ss_dssp SSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEE------EE------ESCSEEEEESCCTTCEEEECCEEECSSCB
T ss_pred CCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEe------ec------CCceEEEEcCCCCCEEEEEEEEEecCCeE
Confidence 36899999865321 234666766544333221 11 11224678999999999999874 3
Q ss_pred -CccceEEEECCC
Q 011680 143 -DSSREFWFQTPP 154 (479)
Q Consensus 143 -~~~~~~~F~T~p 154 (479)
..+..-.++|.|
T Consensus 84 s~~S~~~~~~T~p 96 (97)
T d2crza1 84 GPFSEKCDITTAP 96 (97)
T ss_dssp CCCCCCEEEECCC
T ss_pred cCCcCCCeEEeCc
Confidence 345677888876
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.12 E-value=0.00054 Score=51.89 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=48.7
Q ss_pred CceEEEeecCCCCCcEEEEEEcCCCCCcc----EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 61 PQQVRITQGDYDGKAVIISWVTPNELGSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 61 P~~v~lt~~~~~~~~~~i~W~t~~~~~~~----~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
|..+++.... .+++.|.|.-+...... .|+|.............. .....+.|++|+|+|.|.
T Consensus 4 ~~~l~~~~~t--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~ 70 (95)
T d2djsa1 4 VPIMHQVSAT--MRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVYV 70 (95)
T ss_dssp CSCCEEEEEC--SSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEEE
T ss_pred CCccEEEeec--CCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeec-----------CCccEEEEeecCCccEEE
Confidence 3446655433 36999999876543333 345554433222111100 112356899999999999
Q ss_pred EEeCC----C--CccceEEEECCC
Q 011680 137 YKIGD----G--DSSREFWFQTPP 154 (479)
Q Consensus 137 Y~v~~----g--~~~~~~~F~T~p 154 (479)
+||.. | ..+....|+|.|
T Consensus 71 ~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 71 VQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp EEEEEEESSCEEEECCCEEEECCC
T ss_pred EEEEEEcCCCCCCCCCCEEEEeCC
Confidence 99874 4 335677899987
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.07 E-value=0.0013 Score=49.16 Aligned_cols=70 Identities=11% Similarity=0.199 Sum_probs=46.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|.+|.++.-. .+++.|+|..+... ..-.|+|....+....... . .+.-...+.|++|+|+|.|.++
T Consensus 3 ~P~~l~v~~vt--~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~~----~------v~~~~~~~~i~~L~p~t~Y~~~ 70 (89)
T d1fnfa3 3 SPTGIDFSDIT--ANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----R------VPHSRNSITLTNLTPGTEYVVS 70 (89)
T ss_dssp CCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE----E------EETTCCEEEEESCCTTCEEEEE
T ss_pred cCcCCEEEEec--CCEEEEEEEeCCCEEeeEEEEEEECCCCCceEEE----E------ECCCccEEEECCCcccCEEEEE
Confidence 67788877444 46999999976533 3346888776543322110 0 0122345789999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 71 V~a 73 (89)
T d1fnfa3 71 IVA 73 (89)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.00055 Score=52.76 Aligned_cols=85 Identities=14% Similarity=0.198 Sum_probs=50.1
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC-----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~-----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
+|..+.+.. . .+++.|.|..+...+ .-.|+|....+.......... ........++|+||+|+|.
T Consensus 5 ~P~~~~~~~-~--~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~L~p~t~ 74 (101)
T d2haza1 5 SPSIDQVEP-Y--SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA-------KEASMEGIVTIVGLKPETT 74 (101)
T ss_dssp CCEEEEEEE-C--SSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEH-------HHHHHHSEEEECSCCTTCE
T ss_pred CCccCEEEe-e--CCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeee-------ecccceeEEEecCCCCCeE
Confidence 664343332 2 358999999764322 235677665543221111100 0011123478999999999
Q ss_pred EEEEeCC------CCccceEEEECCC
Q 011680 135 YYYKIGD------GDSSREFWFQTPP 154 (479)
Q Consensus 135 Y~Y~v~~------g~~~~~~~F~T~p 154 (479)
|.+||.. |..+..-.|+|.|
T Consensus 75 Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 75 YAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 9999875 4556677899987
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.04 E-value=0.00071 Score=52.26 Aligned_cols=79 Identities=15% Similarity=0.286 Sum_probs=49.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..|.+..... +++.|+|..+.... .-.|+|.............. ...+.|+||+|+|.|
T Consensus 13 ~P~~l~v~~~s~--~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y 77 (103)
T d1x5ga1 13 PAPNLRAYAASP--TSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTEY 77 (103)
T ss_dssp CCSSCEEEEEET--TEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCEE
T ss_pred cCCCcEEEEccC--CEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEecc-------------ccEEecCCCCCCCEE
Confidence 566777765443 59999998654322 23577776654333222211 124578999999999
Q ss_pred EEEeCC----C--CccceEEEECC
Q 011680 136 YYKIGD----G--DSSREFWFQTP 153 (479)
Q Consensus 136 ~Y~v~~----g--~~~~~~~F~T~ 153 (479)
.++|.. | ..+....++|.
T Consensus 78 ~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 78 SFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEEEEECSSCCCCBCCCCCEECC
T ss_pred EEEEEEEcCCcCcCCCCCEEEEcC
Confidence 999864 3 33445566765
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.03 E-value=0.0012 Score=49.31 Aligned_cols=69 Identities=17% Similarity=0.260 Sum_probs=46.1
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|.++.+.... .+++.|+|...... ..-.|+|........... .. ......+.|+||+|+|+|.++
T Consensus 3 ~P~~l~v~~v~--~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~~ 69 (88)
T d1qr4a2 3 SPKGISFSDIT--ENSATVSWTPPRSRVDSYRVSYVPITGGTPNVV-----TV------DGSKTRTKLVKLVPGVDYNVN 69 (88)
T ss_dssp CCSCEEEESCC--SSCEEEEECCCSSCCSEEEEEEEETTCCCCEEE-----EE------ETTCCEEEECSCCSSCEEEEE
T ss_pred CCcceEEEEec--CCEEEEEEEcccEeeceEEEEEEeccCCceEEE-----Ee------cCCccEEEECCCCCCCEEEEE
Confidence 67788887655 36999999866433 345778877654332221 11 112235789999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 70 V~a 72 (88)
T d1qr4a2 70 IIS 72 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=97.00 E-value=0.0022 Score=47.88 Aligned_cols=66 Identities=18% Similarity=0.345 Sum_probs=41.2
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
.+|..|.+.... .+++.|+|.-... ......|....+.. ...... . -..+++||+|+|+|.|+
T Consensus 5 ~~P~~l~~~~~~--~~sv~lsW~~p~~-~~~i~~Y~i~~~~~-~~~~~~-----------~--t~~~~~~L~p~t~Y~~~ 67 (88)
T d1k85a_ 5 TAPTNLASTAQT--TSSITLSWTASTD-NVGVTGYDVYNGTA-LATTVT-----------G--TTATISGLAADTSYTFT 67 (88)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSC-CSSEEEEEEEESSS-EEEEES-----------S--SEEEECCCCSSCEEEEE
T ss_pred CCCCCcEEEEec--CCEEEEEEeCCCC-CCCEEEEEEEccce-EEEecC-----------C--CEEEECCCCCCCEEEEE
Confidence 478888887544 3699999986542 33456665543211 111111 1 13578999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 68 V~A 70 (88)
T d1k85a_ 68 VKA 70 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.0018 Score=49.57 Aligned_cols=85 Identities=16% Similarity=0.240 Sum_probs=52.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..|++..-.. +++.|+|....... .-.|+|....+..... .... .......+.|+||+|+
T Consensus 4 ~pP~~l~v~~~~~--~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~------~~~~~~~~~i~~L~p~ 72 (104)
T d2b5ib2 4 MAPISLQVVHVET--HRCNISWEISQASHYFERHLEFEARTLSPGHTWEEA---PLLT------LKQKQEWICLETLTPD 72 (104)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTS---CCEE------ECSCCCEEEECSCCTT
T ss_pred CCCCCcEEEEEeC--CEEEEEEccccccccccceeEEEEEEecccccceee---eEEe------cCCCcEEEEECCCCCC
Confidence 4788898886653 59999999875321 1245665554322110 0000 1122344688999999
Q ss_pred cEEEEEeCC----C------CccceEEEECCC
Q 011680 133 TKYYYKIGD----G------DSSREFWFQTPP 154 (479)
Q Consensus 133 t~Y~Y~v~~----g------~~~~~~~F~T~p 154 (479)
|.|.+||.. | +.|+...|+|.|
T Consensus 73 t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 73 TQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp CEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred CEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 999999874 3 125567899977
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.97 E-value=0.0017 Score=49.84 Aligned_cols=83 Identities=17% Similarity=0.201 Sum_probs=51.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|.++++..-. .+++.|+|...... ..-.|+|....+..... .. .+-...++|+||+|||.|.+
T Consensus 2 ~~P~~l~~~~~t--~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~------~~------~~~~~~~~l~~L~p~t~Y~~ 67 (102)
T d2cuha1 2 DGPTQLRALNLT--EGFAVLHWKPPQNPVDTYDIQVTAPGAPPLQA------ET------PGSAVDYPLHDLVLHTNYTA 67 (102)
T ss_dssp SSCEEEECCCCS--SSCEEEEEECCSSCCSEEEEEEECSSSCCEEE------EE------ETTCSEEEECSCCSSSEEEE
T ss_pred cCCCccEEEEeC--CCEEEEEEEeeeccceeeEEEEEeccccceee------ee------eeeeeeEEEccEEeeEEEEE
Confidence 367778776433 46999999976433 34577776544321111 11 11223568999999999999
Q ss_pred EeCC----CCcc-ceEEEECCCC
Q 011680 138 KIGD----GDSS-REFWFQTPPK 155 (479)
Q Consensus 138 ~v~~----g~~~-~~~~F~T~p~ 155 (479)
+|.. |.+. ....|+|.+.
T Consensus 68 ~V~a~~~~~~s~~~~~~~~T~~~ 90 (102)
T d2cuha1 68 TVRGLRGPNLTSPASITFTTGLE 90 (102)
T ss_dssp EEEEEETTEECCCEEEEEESCCC
T ss_pred EEEEEeCCCCcCCEEEEEECCCC
Confidence 9874 2221 2557888765
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.93 E-value=0.003 Score=47.17 Aligned_cols=70 Identities=19% Similarity=0.319 Sum_probs=46.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|..++++--. .+++.|.|..+... ..-.|+|....+...... .. .+.-...++|.||+|||.|.++
T Consensus 4 ~P~~l~v~~~s--~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~------~~----~~~~~~~~~i~~L~p~t~Y~~~ 71 (90)
T d1tena_ 4 APSQIEVKDVT--DTTALITWFKPLAEIDGIELTYGIKDVPGDRTT------ID----LTEDENQYSIGNLKPDTEYEVS 71 (90)
T ss_dssp CCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEEETTCTTCCEE------EE----EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCcEEEEec--CCEEEEEEEeCceEeccEEEEEEEcCCCceeEE------EE----ecCCcceeeEeeecCCCEEEEE
Confidence 68888887543 46999999976533 345778876654322111 11 0122335789999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 72 V~a 74 (90)
T d1tena_ 72 LIS 74 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.85 E-value=0.0015 Score=50.15 Aligned_cols=82 Identities=17% Similarity=0.398 Sum_probs=49.5
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC--CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
.+|..+.+.... .+++.|+|..+.. ...-.|+|............ . ... ....|+||+|+|.|.
T Consensus 12 ~~P~~~~~~~~~--~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~-----~-----~~~--~~~~i~~L~p~t~Y~ 77 (102)
T d1x5za1 12 GQPLNFKAEPES--ETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT-----I-----EPG--TSYRLQGLKPNSLYY 77 (102)
T ss_dssp CCCEEEEEECSS--SSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE-----E-----CSS--SEEEEECCCTTCEEE
T ss_pred cCCCCeEEEEcc--CCEEEEEEECCCCCCccceEEEEEeCCCCceEEEE-----c-----CCc--CEEEECCCCCCCEEE
Confidence 468888877544 3699999987532 12235666654432211110 0 011 135789999999999
Q ss_pred EEeCC----C--CccceEEEECCC
Q 011680 137 YKIGD----G--DSSREFWFQTPP 154 (479)
Q Consensus 137 Y~v~~----g--~~~~~~~F~T~p 154 (479)
+||.. | ..+....++|+.
T Consensus 78 ~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 78 FRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp ECEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEcCCCEeCCCCCEEEEcCC
Confidence 99864 3 234566788864
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.85 E-value=0.00067 Score=53.02 Aligned_cols=72 Identities=14% Similarity=0.225 Sum_probs=40.6
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCCc----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..+.+.......+++.|+|..+...+. -.|+|....+... ..... .......++|+||+|+|+|
T Consensus 13 ~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~-~~~~~---------~~~~~~~~~i~~L~p~t~Y 82 (108)
T d1wf5a1 13 APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWT-VLLAS---------VDPKATSVTVKGLVPARSY 82 (108)
T ss_dssp CCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCE-EEESS---------CCTTCCEEEEESCCTTCEE
T ss_pred CCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCce-EEeee---------ecCCccEEEECCCCCCCEE
Confidence 44444444433334799999987643332 2455655433211 11100 1122335688999999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
.+||..
T Consensus 83 ~frV~A 88 (108)
T d1wf5a1 83 QFRLCA 88 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.81 E-value=0.004 Score=46.79 Aligned_cols=71 Identities=14% Similarity=0.309 Sum_probs=46.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+|..|.+..... +++.|+|.-+... ..-.|.|....+..... .... ..-...++++||+|||+|..
T Consensus 5 ~~P~~l~v~~v~~--~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~------~~~~----~~~~~~~~i~~L~p~t~Y~v 72 (93)
T d1tdqa1 5 DGPTQILVRDVSD--TVAFVEWTPPRAKVDFILLKYGLVGGEGGKT------TFRL----QPPLSQYSVQALRPGSRYEV 72 (93)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECCSSCCSEEEEEEEESSSSCCCE------EEEE----CTTCSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEeCC--CEEEEEEEccccCCCceEEEEEeccCcceee------EEEe----CCCceEEEEeCcccceEEEE
Confidence 3788888876554 5999999866543 34477787765432211 1111 12233568999999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 73 ~V~a 76 (93)
T d1tdqa1 73 SISA 76 (93)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0017 Score=48.45 Aligned_cols=70 Identities=17% Similarity=0.250 Sum_probs=45.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|..+.+..-.. +++.|+|.-+... ..-.|+|....+...... .....-...++|+||+|||.|.++
T Consensus 3 aP~nl~v~~~~~--~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~~----------~~~~~~~~~~~~~~L~p~t~Y~~~ 70 (89)
T d1fnha3 3 APSNLRFLATTP--NSLLVSWQPPRARITGYIIKYEKPGSPPREVV----------PRPRPGVTEATITGLEPGTEYTIY 70 (89)
T ss_dssp CCEEEEEEEEET--TEEEEEEECCSSCCSEEEEEEECTTSCCEECT----------TCCCTTCCEEEEESCCTTCEEEEE
T ss_pred cCcCCEEEEecC--CEEEEEEeCCCcCCceEEEEEeeccCCccEEE----------EEcCCCccEEEEEeeeCCCEEEEE
Confidence 677888875543 6999999976533 334777876543211000 001122345789999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 71 V~a 73 (89)
T d1fnha3 71 VIA 73 (89)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0034 Score=46.81 Aligned_cols=70 Identities=17% Similarity=0.320 Sum_probs=44.8
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC--CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~--~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
+|..|+++.-. .+++.|+|...... ..-.|+|....+...... .. .......++|+||+|+|.|.+
T Consensus 3 pP~~l~~~~~~--~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~----~~------~~~~~~~~~i~~L~p~t~Y~~ 70 (91)
T d1fnfa2 3 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAE----LS------ISPSDNAVVLTNLLPGTEYVV 70 (91)
T ss_dssp CCEEEEEESCC--SSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEE----EE------ECTTCCEEEECSCCTTCEEEE
T ss_pred cCCceEEEEeC--CCEEEEEEEecCCCCcceeEEEEEECCCCccEEE----EE------eCCCceEEEEeceeCCCEEEE
Confidence 47778777433 46999999865421 234778877654332111 01 012233578999999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 71 ~V~a 74 (91)
T d1fnfa2 71 SVSS 74 (91)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.0056 Score=46.99 Aligned_cols=72 Identities=17% Similarity=0.275 Sum_probs=44.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-Cc----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-GS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..|.+.....+ ..+.|.|..+... .. -.|+|....+...... ... ..-...+.|.+|+|+|
T Consensus 6 dPP~nl~v~~~~~~-~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~----~~~------~~~~t~~~i~~L~p~t 74 (105)
T d1erna2 6 DAPVGLVARLADES-GHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQR----VEI------LEGRTECVLSNLRGRT 74 (105)
T ss_dssp CCCEEEEEEECCC--CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEE----EEE------CTTCCEEEECSCCSSC
T ss_pred CCCCCCEEEEecCC-CcEEEEeeeccccccceEEEEEEEEecCCCCCceEE----Eee------cCCccEEEEeCCCCCc
Confidence 47888988876654 6899999976422 22 2566665543221110 110 1112356899999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
+|.+||..
T Consensus 75 ~Y~~rVRa 82 (105)
T d1erna2 75 RYTFAVRA 82 (105)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999854
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.75 E-value=0.004 Score=47.42 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=52.5
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..+++..... +++.|.|....... .-.|.|...++.......-. .. .+.....+|.+|+|+
T Consensus 3 ~~P~~~~~~~~s~--tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--~~------~~~~~~~~i~~L~p~ 72 (101)
T d1x4ya1 3 AGPYITFTDAVNE--TTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--MV------EGDRYWHSISHLQPE 72 (101)
T ss_dssp SCCEEEEEECSSS--SCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--EE------ETTCCEEEECSCCTT
T ss_pred CCCcccEEEEEcC--CEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEE--EE------cCCeeEEEEcCCCCC
Confidence 3677788776543 69999998653221 22577776554322111100 00 122234578999999
Q ss_pred cEEEEEeCC------CCccceEEEECCC
Q 011680 133 TKYYYKIGD------GDSSREFWFQTPP 154 (479)
Q Consensus 133 t~Y~Y~v~~------g~~~~~~~F~T~p 154 (479)
+.|.++|.. |..|+...++|..
T Consensus 73 t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 73 TSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp CEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred CEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 999999874 3456678888853
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.74 E-value=0.0041 Score=47.57 Aligned_cols=71 Identities=15% Similarity=0.138 Sum_probs=42.6
Q ss_pred CCCceEEEee--cCCCCCcEEEEEEcCCCC----C----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecC
Q 011680 59 NAPQQVRITQ--GDYDGKAVIISWVTPNEL----G----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (479)
Q Consensus 59 ~~P~~v~lt~--~~~~~~~~~i~W~t~~~~----~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~g 128 (479)
.+|..|.+.. .....+++.|+|..+... + .-.|+|............. .....++|.|
T Consensus 4 ~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~------------~~~~~~~i~~ 71 (103)
T d1f6fb2 4 EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFT------------GHQTQFKVFD 71 (103)
T ss_dssp CCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEE------------ETCSEEEECC
T ss_pred CCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeecc------------cceeEEEeCC
Confidence 4677776653 334447899999987422 1 1255566555433322110 1123578999
Q ss_pred CCCCcEEEEEeCC
Q 011680 129 LEYDTKYYYKIGD 141 (479)
Q Consensus 129 L~p~t~Y~Y~v~~ 141 (479)
|+|||.|.+||..
T Consensus 72 L~p~t~Y~~rVra 84 (103)
T d1f6fb2 72 LYPGQKYLVQTRC 84 (103)
T ss_dssp CCTTCEEEEEEEE
T ss_pred CCcceEEEEEEEE
Confidence 9999999999874
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.73 E-value=0.0042 Score=46.59 Aligned_cols=81 Identities=14% Similarity=0.157 Sum_probs=50.5
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|..+.+.--. .+++.|+|..+... ..-.|+|....+... . ... +.....++|+||+|||.|.++
T Consensus 4 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~-~-----~~~------~~~~~~~~i~~L~p~t~Y~~~ 69 (93)
T d2cuma1 4 APRDLEAKEVT--PRTALLTWTEPPVRPAGYLLSFHTPGGQTQ-E-----ILL------PGGITSHQLLGLFPSTSYNAR 69 (93)
T ss_dssp CCEEEEEESCC--SSCEEEEEECCSSCCSEEEEEEECTTSCEE-E-----EEE------CSSCSEEEECSCCTTCEEEEE
T ss_pred cCCCCEEEEeC--CCEEEEEEEccccccccEEEEEEccccccE-E-----EEE------CCCccEEEEeCccCCCEEEEE
Confidence 67777766433 47999999986533 445777876543111 0 111 122335789999999999999
Q ss_pred eCC----CCcc-ceEEEECCC
Q 011680 139 IGD----GDSS-REFWFQTPP 154 (479)
Q Consensus 139 v~~----g~~~-~~~~F~T~p 154 (479)
|.. |.+. ....|+|.+
T Consensus 70 V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 70 LQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp EEEEBTTBCCCCEEEEEECCC
T ss_pred EEEEeCCCCCCCEEEEEEeCC
Confidence 874 3332 245677765
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.72 E-value=0.002 Score=50.47 Aligned_cols=88 Identities=19% Similarity=0.207 Sum_probs=52.5
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+...+...+++.|+|.-..... .-.|+|+...+....... .....+...++.|++|+|+++
T Consensus 6 ~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~--------~~~~~~~~~~~~i~~L~~~t~ 77 (115)
T d1bqua2 6 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIP--------PEDTASTRSSFTVQDLKPFTE 77 (115)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECC--------GGGGCSCCSEEEECSCCSSEE
T ss_pred CCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccc--------cccccccccEEeeCCCccCcE
Confidence 47778888765555579999998653222 235667665443221110 011223345678999999999
Q ss_pred EEEEeCC----CC-----ccceEEEECCC
Q 011680 135 YYYKIGD----GD-----SSREFWFQTPP 154 (479)
Q Consensus 135 Y~Y~v~~----g~-----~~~~~~F~T~p 154 (479)
|.+||.. |. .+....++|+.
T Consensus 78 Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 78 YVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 9999853 32 23466777754
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.70 E-value=0.0049 Score=45.80 Aligned_cols=70 Identities=24% Similarity=0.250 Sum_probs=44.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|..|.++.-.+ +++.|+|..+... ....++|............ .. ..-.-+.+|+||+|||+|+++
T Consensus 2 pP~~l~~~~v~~--~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~~~ 69 (90)
T d1fnha1 2 APTDLKFTQVTP--TSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----NL------APDSSSVVVSGLMVATKYEVS 69 (90)
T ss_dssp CCEEEEEEEECS--SCEEEEEECCSSCCSEEEEEEEESSSCSCCCEE----EE------CTTCCEEEECSCCTTCEEEEE
T ss_pred CCCCEEEEEecC--CEEEEEEEccceeccceEEEEEeeeCCCceEEE----Ee------CCCCeEEEEecccCceEEEEE
Confidence 577777775443 6999999987533 3446677665432221110 00 111224799999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 70 V~a 72 (90)
T d1fnha1 70 VYA 72 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.64 E-value=0.0011 Score=58.60 Aligned_cols=60 Identities=20% Similarity=0.279 Sum_probs=40.1
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
|+.++||+|.. ...+.++.+. ..|.++++||+++.+. + . .+.++ +....-+..+.||||.
T Consensus 14 rI~vIgDIHG~---~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp----~--s-----~~vl~-~l~~~~~~~i~GNHE~ 78 (219)
T d1g5ba_ 14 NIWVVGDLHGC---YTNLMNKLDTIGFDNKKDLLISVGDLVDRGA----E--N-----VECLE-LITFPWFRAVRGNHEQ 78 (219)
T ss_dssp CEEEECCCTTC---HHHHHHHHHHHTCCTTTCEEEECSCCSSSSS----C--H-----HHHHG-GGGSTTEEECCCHHHH
T ss_pred eEEEEEecccC---HHHHHHHHHHcCCCCCCCEEEEeCCccccCc----c--H-----HHHHH-HhhccccccccCcHHH
Confidence 79999999865 3344444332 5689999999998765 2 1 11222 2334568899999995
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0044 Score=47.24 Aligned_cols=83 Identities=16% Similarity=0.198 Sum_probs=45.9
Q ss_pred CCCceEEEeec--CCCCCcEEEEEEcCCCC----Ccc----EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecC
Q 011680 59 NAPQQVRITQG--DYDGKAVIISWVTPNEL----GSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (479)
Q Consensus 59 ~~P~~v~lt~~--~~~~~~~~i~W~t~~~~----~~~----~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~g 128 (479)
.+|..+.+..- +...+++.|+|..+... ... .++|....+....... ......++|.+
T Consensus 4 ~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~------------~~~~~~~~i~~ 71 (104)
T d3d48r2 4 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKILS 71 (104)
T ss_dssp CCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEE------------EETCSEEEECC
T ss_pred cCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeec------------cccccEEEECC
Confidence 47777877643 33447899999976421 122 3444444332221110 11133568899
Q ss_pred CCCCcEEEEEeCC----C---CccceEEEECC
Q 011680 129 LEYDTKYYYKIGD----G---DSSREFWFQTP 153 (479)
Q Consensus 129 L~p~t~Y~Y~v~~----g---~~~~~~~F~T~ 153 (479)
|+|+|.|.+||.. | ..|+...++||
T Consensus 72 L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 72 LHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp --CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 9999999999874 4 23566777776
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.56 E-value=0.0062 Score=44.98 Aligned_cols=68 Identities=13% Similarity=0.254 Sum_probs=45.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|..++++.-. .+++.|+|..+... ..-.|+|......... ... +.-...++|+||+|+|+|.++
T Consensus 2 aP~~l~v~~~t--~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~~~------~~~------~~~~~~~~~~~L~p~t~Y~v~ 67 (87)
T d1qr4a1 2 NPKDLEVSDPT--ETTLSLRWRRPVAKFDRYRLTYVSPSGKKNE------MEI------PVDSTSFILRGLDAGTEYTIS 67 (87)
T ss_dssp CCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECTTCCEEE------EEE------CTTCSEEEEESCCSSCEEEEE
T ss_pred cCcCcEEEEec--CCEEEEEEECCCCCcceeEEEeecCCcceeE------EeC------CCCcCEEEECCCCcCCEEEEE
Confidence 68888887544 36999999986543 3447788765432111 011 122345789999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 68 V~a 70 (87)
T d1qr4a1 68 LVA 70 (87)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.51 E-value=0.0052 Score=46.35 Aligned_cols=72 Identities=13% Similarity=0.203 Sum_probs=45.8
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC--CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~--~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
+|.++++....+. +.+.|+|...... ..-.|+|....+...... ... .+.....++|+||+|||.|..
T Consensus 4 PP~~l~v~~~~~t-s~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~-----~~~----~~~~~~~~~i~~L~p~t~Y~v 73 (94)
T d1fnfa1 4 PPTNLHLEANPDT-GVLTVSWERSTTPDITGYRITTTPTNGQQGNSL-----EEV----VHADQSSCTFDNLSPGLEYNV 73 (94)
T ss_dssp CCEEEEEEECSSS-SCEEEEEECCSCSSCCEEEEEEEETTTCSSCCE-----EEE----ECTTCCEEECCCCCTTSCEEE
T ss_pred cCcCcEEEEecCC-CEEEEEeeCCCCCCeeEEEEEEEEecccCceEE-----EEE----eCCCccEEEECCCCCCCEEEE
Confidence 6888888754443 4689999976432 234678876654322111 111 112234689999999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 74 ~V~a 77 (94)
T d1fnfa1 74 SVYT 77 (94)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.51 E-value=0.0076 Score=44.83 Aligned_cols=69 Identities=17% Similarity=0.223 Sum_probs=45.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|.++.++.-. .+++.|+|.-+... ..-.|+|....+...... . ...-.....|++|+|||.|.++
T Consensus 4 pP~~l~v~~~~--~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~-----~------~~~~~~~~~i~~L~p~t~Y~~~ 70 (90)
T d1fnha2 4 PPRRARVTDAT--ETTITISWRTKTETITGFQVDAVPANGQTPIQR-----T------IKPDVRSYTITGLQPGTDYKIY 70 (90)
T ss_dssp CCEEEEEEEEC--SSEEEEEEECCSSCCCCEEEEEEESSSSCCEEE-----E------CCTTCSEEEEESCCTTCEEEEE
T ss_pred cCCCCEEEEec--CCEEEEEEECCCCCCceeEEEEEEccCCceEEE-----e------cCCCccEEEeCCCCCCcEEEEE
Confidence 67888887544 36999999965433 345777876554222111 1 1122345688999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 71 V~a 73 (90)
T d1fnha2 71 LYT 73 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.51 E-value=0.0051 Score=46.28 Aligned_cols=71 Identities=15% Similarity=0.243 Sum_probs=43.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCCc-----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELGS-----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~~-----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
+|..+.+..-. .+++.|.|..+..... -.|+|+........... .. .......+.|+||+|+|.
T Consensus 9 ~P~~~~v~~~s--~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~----~~-----~~~~~~~~~i~~L~p~t~ 77 (95)
T d2ibga1 9 VPELLEIEEYS--ETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKA----TI-----EGAHARSFKIAPLETATM 77 (95)
T ss_dssp CCEECCCBCCS--SSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEE----EE-----ECTTCCEEEECSCCTTCE
T ss_pred CCcCeEEEEeC--CCEEEEEEEeeeeccCCcccccceeEeeeeecceeeee----ec-----cCCceeEEEEeeccCCeE
Confidence 46556555333 4799999986532221 36788776543221110 00 112345678999999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|.+||..
T Consensus 78 Y~~~V~A 84 (95)
T d2ibga1 78 YEFKLQS 84 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999875
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.009 Score=46.45 Aligned_cols=85 Identities=15% Similarity=0.282 Sum_probs=52.7
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDD 128 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~g 128 (479)
.+|..|+++..+ +++.|+|..+.... .-.|+|............ .. .....-.+.+.+
T Consensus 7 ~pP~nl~v~~~~---~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~ 74 (114)
T d2gysa2 7 PEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAI---LL------SNTSQATLGPEH 74 (114)
T ss_dssp CCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEE---EE------ESSSEEEECTTT
T ss_pred CcCCCeEEEEeC---CEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEE---ee------ccCceEEEEeCC
Confidence 478889987543 48999999874321 124666665433222111 00 112234678999
Q ss_pred CCCCcEEEEEeCC----C--------CccceEEEECCCC
Q 011680 129 LEYDTKYYYKIGD----G--------DSSREFWFQTPPK 155 (479)
Q Consensus 129 L~p~t~Y~Y~v~~----g--------~~~~~~~F~T~p~ 155 (479)
|.|+|.|..||.. | ..|+.-.|+|+|.
T Consensus 75 L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 75 LMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp CCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred CCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 9999999999864 2 2355778999873
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.46 E-value=0.0068 Score=46.78 Aligned_cols=69 Identities=20% Similarity=0.368 Sum_probs=36.8
Q ss_pred CCcEEEEEEcCCCCCcc----EEEEEecCCCC-cceEEeeEEE-EeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 73 GKAVIISWVTPNELGSN----RVQYGKLEKKY-DSSAEGTVTN-YTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 73 ~~~~~i~W~t~~~~~~~----~V~y~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
.+++.|+|..+...+.. .|+|....... +......... .............++|+||+|+|+|.+||..
T Consensus 13 ~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A 87 (107)
T d2ic2a1 13 DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 87 (107)
T ss_dssp ---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred CCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEEEE
Confidence 36999999987543333 45665443222 1111111100 0001122345567899999999999999875
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.42 E-value=0.0061 Score=46.68 Aligned_cols=72 Identities=14% Similarity=0.276 Sum_probs=46.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC--CC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE--LG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~--~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..|.++.-....+.+.|+|..+.. .. .-.|+|............ ..+......|.+|+|+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~ 71 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-----------VKDLQHHCVIHDAWSG 71 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-----------CGGGCSEEEESSCCTT
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeec-----------cccceEEEEECCCCCC
Confidence 478888887654444789999997532 11 235667665543322211 1122346789999999
Q ss_pred cEEEEEeCC
Q 011680 133 TKYYYKIGD 141 (479)
Q Consensus 133 t~Y~Y~v~~ 141 (479)
|.|.+||..
T Consensus 72 t~Y~~rVra 80 (104)
T d1n26a3 72 LRHVVQLRA 80 (104)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999874
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.41 E-value=0.0048 Score=46.71 Aligned_cols=69 Identities=13% Similarity=0.194 Sum_probs=46.8
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC--CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~--~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
.+|..|.+..... +++.|+|..+... -.-.|+|....+....... . .....++|.+|+|+|.|.
T Consensus 4 ~~P~nl~v~~~~~--~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-~-----------~~~~~~~~~~L~p~t~Y~ 69 (95)
T d2b5ic1 4 WAPENLTLHKLSE--SQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-V-----------DYRHKFSLPSVDGQKRYT 69 (95)
T ss_dssp CCCEEEEEEEEET--TEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEE-E-----------CSSCEEEECSCCTTSCEE
T ss_pred cCCCCCEEEEEeC--CEEEEEECCCCCceeEEEEEEEEcCCCceeeEee-e-----------cccceeEcCCCCCCCEEE
Confidence 4788898886553 5999999976532 2347788776544332211 1 112367889999999999
Q ss_pred EEeCC
Q 011680 137 YKIGD 141 (479)
Q Consensus 137 Y~v~~ 141 (479)
+||..
T Consensus 70 frVRa 74 (95)
T d2b5ic1 70 FRVRS 74 (95)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.41 E-value=0.0023 Score=49.52 Aligned_cols=57 Identities=16% Similarity=0.169 Sum_probs=34.1
Q ss_pred CcEEEEEEcCCCC-----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 74 KAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 74 ~~~~i~W~t~~~~-----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
+++.|+|..+... ..-.|+|.............. .-.....++||+|||+|.+||..
T Consensus 26 ~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~rV~A 87 (107)
T d2crma1 26 HSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS-----------GATREHLCDRLNPGCFYRLRVYC 87 (107)
T ss_dssp TEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC-----------SSCSEEEECSCCTTSCEEEEEEE
T ss_pred CEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEeec-----------CCccEEEEeccCCCCEEEEEEEE
Confidence 6999999865322 123556654443322211111 11223588999999999999875
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.39 E-value=0.0045 Score=47.93 Aligned_cols=76 Identities=12% Similarity=-0.028 Sum_probs=43.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+..-. .+++.|+|.-....+ ...|+|.................. .......+.|.||+|+|.
T Consensus 12 ~~P~~~~~~~~~--~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~~L~p~t~ 84 (111)
T d1wisa1 12 GPPTNLGISNIG--PRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLS-----NEPDARSMEVPDLNPFTC 84 (111)
T ss_dssp CCCEEEEEESCC--SSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEE-----SCTTCSEEEECSCCTTSE
T ss_pred cCCCCCEEEEcC--CCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeee-----cccceeEEEeCCCCCCCE
Confidence 478888877433 469999998654322 235666554332221111110110 122233567899999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|.+||..
T Consensus 85 Y~frV~A 91 (111)
T d1wisa1 85 YSFRMRQ 91 (111)
T ss_dssp ECCCCEE
T ss_pred EEEEEEE
Confidence 9999874
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.29 E-value=0.0056 Score=47.27 Aligned_cols=58 Identities=10% Similarity=-0.004 Sum_probs=36.7
Q ss_pred CcEEEEEEcCCCCCc----cEEEEEecCCC-CcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 74 KAVIISWVTPNELGS----NRVQYGKLEKK-YDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 74 ~~~~i~W~t~~~~~~----~~V~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
+++.|.|........ -.|+|....+. ....+.- ...-.+..+|++|+|+|.|.+||..
T Consensus 22 ~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~----------~~~~~~~~~l~~L~p~t~Y~frVra 84 (106)
T d1cd9b2 22 GCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFH----------LPSSKDQFELCGLHQAPVYTLQMRC 84 (106)
T ss_dssp SCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEE----------EESCEEEEEECCCCSCSCEEEEEEE
T ss_pred CEEEEEEcCcccCCccceEEEEEEeeccccccceeeec----------ccCCceEEEEeccCCCeEEEEEEEE
Confidence 589999986543222 37888765433 2222211 1123455679999999999999864
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.28 E-value=0.0083 Score=45.46 Aligned_cols=73 Identities=11% Similarity=0.124 Sum_probs=40.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCc-------cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS-------NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~-------~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p 131 (479)
.+|..|.+.... .+++.|+|..+..... -.|+|....+....... . . ....-...+.|.+|+|
T Consensus 3 ~~P~~l~v~~~~--~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~-~--~-----~~~~~~~~~~i~~L~p 72 (101)
T d1iarb2 3 RAPGNLTVHTNV--SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIY-N--V-----TYLEPSLRIAASTLKS 72 (101)
T ss_dssp CCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEE-E--E-----CSSCCEEEECC-----
T ss_pred ccCCcCEEEEEe--CCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeee-e--e-----ccCccceEEEECCCCC
Confidence 478878776544 3699999997743221 36777766543332111 0 0 1123345679999999
Q ss_pred CcEEEEEeCC
Q 011680 132 DTKYYYKIGD 141 (479)
Q Consensus 132 ~t~Y~Y~v~~ 141 (479)
+|.|.+||..
T Consensus 73 ~t~Y~~rVrA 82 (101)
T d1iarb2 73 GISYRARVRA 82 (101)
T ss_dssp CCCEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999974
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.28 E-value=0.0039 Score=49.40 Aligned_cols=88 Identities=22% Similarity=0.313 Sum_probs=51.1
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC------CccEEEEEecCCCCc---ceEEeeEEEEeeeccccceEEEEEecCCC
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL------GSNRVQYGKLEKKYD---SSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~------~~~~V~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~h~v~l~gL~ 130 (479)
+|..|.+.--.. +++.|+|...... ....+.|........ .......... .+-..+++|.+|+
T Consensus 17 ~P~~v~v~~~~~--~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~L~ 88 (125)
T d1uena_ 17 APGNVRVNVVNS--TLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTF------QGSKTHGMLPGLE 88 (125)
T ss_dssp CCSSCEEEEEET--TEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEE------ESSCSEEEEESCC
T ss_pred CCcccEEEEecC--CEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEe------CCCccEEEECCCC
Confidence 577787775443 6999999765311 112344444332111 1111111111 1224468999999
Q ss_pred CCcEEEEEeCC----CC--ccceEEEECCCC
Q 011680 131 YDTKYYYKIGD----GD--SSREFWFQTPPK 155 (479)
Q Consensus 131 p~t~Y~Y~v~~----g~--~~~~~~F~T~p~ 155 (479)
|+|.|.+||.. |. .+....|+|++.
T Consensus 89 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 89 PFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 99999999875 42 345778999764
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.28 E-value=0.016 Score=45.69 Aligned_cols=96 Identities=17% Similarity=0.189 Sum_probs=54.1
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecCCCCcceEE--eeEEEEeeecc---ccceEEEEEecC
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAE--GTVTNYTFYKY---KSGYIHHCLVDD 128 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~h~v~l~g 128 (479)
+.+|..|.++.+ .+++.|+|.-+... ..-.|+|............ .....+..... ..+..-..+|.+
T Consensus 8 P~aP~~v~v~~~---~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 84 (123)
T d1wfta_ 8 PGAPSTVRISKN---VDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHID 84 (123)
T ss_dssp CCCCEEEEEEEC---SSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCB
T ss_pred CcCCcccEEEeC---CCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcC
Confidence 457888888752 26899999965432 2346777765543211100 00011110000 000112336789
Q ss_pred CCCCcEEEEEeCC------CCccceEEEECCCCC
Q 011680 129 LEYDTKYYYKIGD------GDSSREFWFQTPPKI 156 (479)
Q Consensus 129 L~p~t~Y~Y~v~~------g~~~~~~~F~T~p~~ 156 (479)
|+|+|.|.+||.. |..+++..|+|....
T Consensus 85 L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~ 118 (123)
T d1wfta_ 85 YTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKS 118 (123)
T ss_dssp CSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCS
T ss_pred CCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCC
Confidence 9999999999874 445667788886643
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.27 E-value=0.0038 Score=47.37 Aligned_cols=81 Identities=15% Similarity=0.060 Sum_probs=46.4
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC--------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCC
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG--------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~--------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p 131 (479)
+|..|.+.--. .+++.|+|....... .-.|+|............ . ......++|+||+|
T Consensus 4 pP~~v~~~~~s--~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----~------~~~~~~~~i~~L~p 70 (100)
T d1x5ja1 4 PPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----A------NATTLSYLVTGLKP 70 (100)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEE-----C------CBCSSEEEEESCCT
T ss_pred CCcCeEEEEec--CCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEe-----c------CCCccEEEECCCCC
Confidence 57777776544 369999999653111 124556554432221111 0 01112467999999
Q ss_pred CcEEEEEeCC----C--CccceEEEECC
Q 011680 132 DTKYYYKIGD----G--DSSREFWFQTP 153 (479)
Q Consensus 132 ~t~Y~Y~v~~----g--~~~~~~~F~T~ 153 (479)
+|.|.+||.. | ..|..-.++|.
T Consensus 71 ~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 71 NTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp TCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred CCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 9999999874 3 23444455553
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.27 E-value=0.0059 Score=46.91 Aligned_cols=60 Identities=12% Similarity=-0.045 Sum_probs=37.5
Q ss_pred CCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 73 GKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 73 ~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
.+++.|+|.-..... .-.|+|....+........ . ..+-....+|++|+|||.|.+||..
T Consensus 20 ~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~---~------~~~~~~~~~i~~L~p~t~Y~frVra 83 (105)
T d2d9qb2 20 AGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVG---P------LPLEALQYELCGLLPATAYTLQIRC 83 (105)
T ss_dssp CSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEE---E------ECSCEEEEEECSCCSCCCEEEEEEE
T ss_pred CCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeee---c------ccCCcceeEEecccCCeEEEEEEEE
Confidence 368999999653222 2467777654332221111 1 1234556789999999999999864
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=96.26 E-value=0.0065 Score=46.14 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=43.3
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.++.+. +++.|+|.-....+ .-.|+|............... . .-...+.+.+|+|+|.
T Consensus 7 ~~P~~~~v~~~~---~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~L~p~t~ 74 (100)
T d1cfba1 7 NAPKLTGITCQA---DKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK--V-------PNTDSSFVVQMSPWAN 74 (100)
T ss_dssp CCCEEEEEEECS---SEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE--E-------ETTCSEEEEECCSSEE
T ss_pred CcCcCcEEEEcC---CEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeee--c-------CCceEEEEecCCCCCE
Confidence 478888887543 48999998654322 236777765443322211111 0 0112346789999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|.+||..
T Consensus 75 Y~frV~A 81 (100)
T d1cfba1 75 YTFRVIA 81 (100)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999875
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.25 E-value=0.0067 Score=46.59 Aligned_cols=75 Identities=12% Similarity=0.201 Sum_probs=46.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..|.+...+ .+++.|.|....... .-.|+|............- .. ........+++|++|+|+
T Consensus 10 ~pP~~v~v~~~~--~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~i~~L~p~ 81 (109)
T d1va9a1 10 GPPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSI--VE----MKATGDSEVYTLDNLKKF 81 (109)
T ss_dssp SCCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBC--CB----CCCCSSEEEEEEESCCSS
T ss_pred CCCcCcEEEEec--CCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeee--eE----EecCCCeeEEEECCCCcc
Confidence 368888877544 369999999763221 1266776654322211000 00 012234567789999999
Q ss_pred cEEEEEeCC
Q 011680 133 TKYYYKIGD 141 (479)
Q Consensus 133 t~Y~Y~v~~ 141 (479)
|.|.++|..
T Consensus 82 t~Y~~~V~a 90 (109)
T d1va9a1 82 AQYGVVVQA 90 (109)
T ss_dssp CCEEEEEEE
T ss_pred eEEEEEEEE
Confidence 999999874
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.23 E-value=0.0041 Score=48.21 Aligned_cols=84 Identities=15% Similarity=0.167 Sum_probs=50.0
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.++.. .+++.|+|.-.... ..-.|+|...... +..... . .......++|++|+|+|+
T Consensus 9 sPP~~~~~~~t---~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~-~~~~~~---~------~~~~~~~~~i~~L~p~t~ 75 (108)
T d1v5ja_ 9 SPPRGLVAVRT---PRGVLLHWDPPELVPKRLDGYVLEGRQGSQG-WEVLDP---A------VAGTETELLVPGLIKDVL 75 (108)
T ss_dssp CCCEEEEEEEC---SSSEEEEEECCSCCSSCCCBEEEEEEETTCC-CEEEEE---E------ECSSCCEEECCCCCTTSC
T ss_pred CcCCCeEEEEc---CCEEEEEEEecccCCCceeEEEEEeeeeeee-eeeccc---c------ccceeeeEEEEeccCCcE
Confidence 46777776542 26899999965422 1236777765432 111111 0 122345678999999999
Q ss_pred EEEEeCC----C--CccceEEEECCCC
Q 011680 135 YYYKIGD----G--DSSREFWFQTPPK 155 (479)
Q Consensus 135 Y~Y~v~~----g--~~~~~~~F~T~p~ 155 (479)
|.|||.. | ..+....++|+..
T Consensus 76 Y~~rV~A~n~~g~s~~S~~~~~~T~~~ 102 (108)
T d1v5ja_ 76 YEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EEEEEEEEeCCCEeCCcCceEEECCCC
Confidence 9999875 2 2233555666543
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.23 E-value=0.008 Score=46.57 Aligned_cols=72 Identities=24% Similarity=0.352 Sum_probs=41.5
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..+.+.-.. .+++.|+|.-....+ .-.|+|.............. . .......+++++|+|+|.|
T Consensus 13 ~P~~~~v~~~~--~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~--~------~~~~~~~~~v~~L~p~t~Y 82 (108)
T d1x4za1 13 APDRPTISTAS--ETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--A------IPPSRLSVEITGLEKGISY 82 (108)
T ss_dssp CCCCCEEEECC--SSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--E------ECTTCCEEEEESCCTTCEE
T ss_pred cCCCCEEEEcc--CCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEE--e------ecCCccEEEECCCCCCCEE
Confidence 55566665433 369999995333212 23667776543322211111 0 1122345688999999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
.+||..
T Consensus 83 ~frV~A 88 (108)
T d1x4za1 83 KFRVRA 88 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.20 E-value=0.0063 Score=46.74 Aligned_cols=82 Identities=17% Similarity=0.308 Sum_probs=48.2
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEE----ecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYG----KLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+..... +++.|+|.-+.........|- ........... + .+.-.+..+.+|+|+|+
T Consensus 12 ~~P~~~~~~~~~~--~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~-----~------~~~~~~~~~~~L~p~t~ 78 (105)
T d1x3da1 12 DIPNPPRIANRTK--NSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQC-----Y------MGSQKQFKITKLSPAMG 78 (105)
T ss_dssp CCCCCCEEEEEET--TEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEE-----E------EESCSEEEEESCCTTCE
T ss_pred cCCCCCEEEEccC--CEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEE-----e------cCCccEEEecCCcCCcE
Confidence 4677777775443 699999987654444433443 22222111111 1 01122457889999999
Q ss_pred EEEEeCC----C--CccceEEEECC
Q 011680 135 YYYKIGD----G--DSSREFWFQTP 153 (479)
Q Consensus 135 Y~Y~v~~----g--~~~~~~~F~T~ 153 (479)
|.+||.. | ..++...|+|.
T Consensus 79 Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 79 CKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EEEECCEEESSCBCCCCCCEEEECS
T ss_pred EEEEEEEECCCeEcCCCCcEEEECC
Confidence 9999874 3 34556677774
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.17 E-value=0.0063 Score=48.24 Aligned_cols=78 Identities=18% Similarity=0.194 Sum_probs=47.1
Q ss_pred CCcEEEEEEcCCCCC---ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC------CC
Q 011680 73 GKAVIISWVTPNELG---SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD------GD 143 (479)
Q Consensus 73 ~~~~~i~W~t~~~~~---~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~------g~ 143 (479)
.+++.|+|.-+.... .-.|.|.......... ...... ........++|.||+|+|.|.+||.. |.
T Consensus 29 ~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~~---~~~~~~---v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~ 102 (120)
T d1ujta_ 29 PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATS---SWQNLD---AKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGM 102 (120)
T ss_dssp TTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTT---CCEEEE---CCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCC
T ss_pred CCeEEEEecCCCCCCcEEEEEEEeeecccCCCCc---ceEEEE---eccCceeEEEECCCCCCCEEEEEEEEEeCCcCcC
Confidence 479999999764322 2467787654321110 000000 11233445688999999999999864 34
Q ss_pred ccceEEEECCCCC
Q 011680 144 SSREFWFQTPPKI 156 (479)
Q Consensus 144 ~~~~~~F~T~p~~ 156 (479)
.+..-.++|++..
T Consensus 103 ~S~~~~~~T~e~~ 115 (120)
T d1ujta_ 103 DSESKTVRTTEES 115 (120)
T ss_dssp CCCCEEEEECSSC
T ss_pred CCCCEEEEeCCCC
Confidence 4567788998753
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.15 E-value=0.0044 Score=47.14 Aligned_cols=76 Identities=16% Similarity=0.190 Sum_probs=45.0
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEE--eeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAE--GTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~--~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
.|++|+++-.. .+++.|.|...... ....|+|............ ....... ..+.....+|.||+|+|+|.
T Consensus 6 ~~~~l~v~~~t--~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~L~p~t~Y~ 79 (101)
T d2cuia1 6 RLSQLSVTDVT--TSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM----VPGTRHSAVLRDLRSGTLYS 79 (101)
T ss_dssp CCCCCEEESCC--SSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE----EETTCCEEEECSCCTTCEEE
T ss_pred CCCCcEEEEEC--CCEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEee----cccceeEEEeCCCCcCCEEE
Confidence 56677777544 36999999755322 3457778765432211110 1111111 12334556889999999999
Q ss_pred EEeCC
Q 011680 137 YKIGD 141 (479)
Q Consensus 137 Y~v~~ 141 (479)
++|..
T Consensus 80 ~~V~a 84 (101)
T d2cuia1 80 LTLYG 84 (101)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.14 E-value=0.017 Score=44.41 Aligned_cols=71 Identities=14% Similarity=0.166 Sum_probs=44.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC-------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEY 131 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~-------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p 131 (479)
.+|..|.++.-....+++.|+|..+.... .-.++|....+.....+.. .....++|.+|+|
T Consensus 9 ~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~~ 76 (109)
T d1uc6a_ 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL------------SNGTAHTITDAYA 76 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE------------SSCSEEEETTCCS
T ss_pred CCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEecc------------CCceeEEeCCCCC
Confidence 47888888754444478999999864211 1245555554333222111 1123467899999
Q ss_pred CcEEEEEeCC
Q 011680 132 DTKYYYKIGD 141 (479)
Q Consensus 132 ~t~Y~Y~v~~ 141 (479)
+|.|.+||..
T Consensus 77 ~t~Y~~rVrA 86 (109)
T d1uc6a_ 77 GKEYIIQVAA 86 (109)
T ss_dssp SSCEEEEEEC
T ss_pred CCEEEEEEEE
Confidence 9999999964
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.10 E-value=0.0054 Score=46.65 Aligned_cols=71 Identities=15% Similarity=0.236 Sum_probs=44.2
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCC-----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~-----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
.+|..+.+....+ +++.|+|..+... ..-.|+|....+..+..+. . .......++++||+||+
T Consensus 3 ~~P~~~~v~~~~~--~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~-~---------~~~~~~~~~v~~L~~~~ 70 (98)
T d1x5ya1 3 SAPQHLTVEDVTD--TTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN-K---------EPVERCGFTVKDLPTGA 70 (98)
T ss_dssp CCCEEEEEEEECS--SEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS-S---------SCBSSSEEEEECCCTTC
T ss_pred CCCcCcEEEEccC--CEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEee-e---------ecCceeEEEECCCcCCe
Confidence 3677787775443 6999999865322 2246777766543322110 0 11112346789999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
.|.+||..
T Consensus 71 ~Y~frV~A 78 (98)
T d1x5ya1 71 RILFRVVG 78 (98)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999975
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.07 E-value=0.01 Score=44.37 Aligned_cols=82 Identities=18% Similarity=0.220 Sum_probs=49.8
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|.+|.++--. .+++.|+|..+... ..-.|+|....+.... .. .........++|+||+|||.|.++
T Consensus 4 ~P~~l~v~~vt--~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~~-------~~---~~~~~~~~~~~i~~L~p~t~Y~~~ 71 (94)
T d1j8ka_ 4 RPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDGIHE-------LF---PAPDGEEDTAELQGLRPGSEYTVS 71 (94)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTEEEE-------EC---CCCCSSCCEEEECSCCCCSEEEEE
T ss_pred CCCCCEEEEec--CCEEEEEEeCCCccccceEEEEEeecCCCce-------EE---EecCCCccEEEECCCCCCCEEEEE
Confidence 57778777444 36999999866432 3446777765432110 00 011233456789999999999999
Q ss_pred eCC----CCccc-eEEEECC
Q 011680 139 IGD----GDSSR-EFWFQTP 153 (479)
Q Consensus 139 v~~----g~~~~-~~~F~T~ 153 (479)
|.. |.+.+ ...++|.
T Consensus 72 V~a~~~~g~S~p~~~~~~T~ 91 (94)
T d1j8ka_ 72 VVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp EEECSSSCCCCCEEEEEECC
T ss_pred EEEEeCCCCcCCEEEEEEEC
Confidence 864 43322 4456663
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.06 E-value=0.0093 Score=44.70 Aligned_cols=70 Identities=10% Similarity=0.032 Sum_probs=42.6
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC--CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~--~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
+|..+.+..-. .+++.|+|..+... ..-.|+|........... .. ...-...++|+||+|||.|.+
T Consensus 8 ~P~~l~v~~~t--~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~----~~------~~~~~t~~~i~~L~p~t~Y~~ 75 (95)
T d2fnba_ 8 QLTDLSFVDIT--DSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFE----DF------VDSSVGYYTVTGLEPGIDYDI 75 (95)
T ss_dssp CCTTCEEECCC--SSCEEEECCCCCCSSCCEEEEEEEEETSCCEEEE----EE------CCSSCSEEEECCCCTTSEEEE
T ss_pred cCCCeEEEEEc--CCEEEEEEEecCCceEEeEEEEEEEeeccceEEE----EE------eCCCCeEEEEecccCCEEEEE
Confidence 46667776444 36999999865422 233677766543221111 00 112234568999999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
+|..
T Consensus 76 ~V~a 79 (95)
T d2fnba_ 76 SVIT 79 (95)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.04 E-value=0.0043 Score=48.03 Aligned_cols=70 Identities=14% Similarity=0.214 Sum_probs=42.2
Q ss_pred CCceEEEeecCC----CCCcEEEEEEcCCCCC--------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEec
Q 011680 60 APQQVRITQGDY----DGKAVIISWVTPNELG--------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVD 127 (479)
Q Consensus 60 ~P~~v~lt~~~~----~~~~~~i~W~t~~~~~--------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~ 127 (479)
+|..+.++.-.. ...++.|+|.-+.... .-.|+|+...+....... .....+++|+
T Consensus 3 PP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~------------~~~~~~~~i~ 70 (106)
T d1axib2 3 PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSVPVY 70 (106)
T ss_dssp CCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEEEEE
T ss_pred CCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeee------------ecccceEEEC
Confidence 677777764322 1247999999764211 235666665543332211 0112367899
Q ss_pred CCCCCcEEEEEeCC
Q 011680 128 DLEYDTKYYYKIGD 141 (479)
Q Consensus 128 gL~p~t~Y~Y~v~~ 141 (479)
+|+|||.|.+||..
T Consensus 71 ~L~~~t~Y~frVRa 84 (106)
T d1axib2 71 SLKVDKEYEVRVRS 84 (106)
T ss_dssp EEETTSCEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999854
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.98 E-value=0.016 Score=42.56 Aligned_cols=68 Identities=13% Similarity=0.239 Sum_probs=45.1
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~ 138 (479)
+|..+.++.-. .+++.|+|..+... ..-.|+|....+...... . ..-.-++.|+||+|||.|.++
T Consensus 3 ~P~nl~v~~~~--~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~------~------~~~~~~~~~~~L~p~t~Y~v~ 68 (86)
T d1tdqa3 3 SPRDLMVTASS--ETSISLIWTKASGPIDHYRITFTPSSGISSEVT------V------PRDRTSYTLTDLEPGAEYIIS 68 (86)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCCSCCSEEEEEEECSSSCCEEEE------E------ESSCSEEEECCCCTTCCEEEE
T ss_pred cCCCCEEEEec--CCEEEEEEeCCCCCccceEEEEecccccceEEE------e------CCCccEEEECCCccccEEEEE
Confidence 67788888654 36999999987533 335778876543221111 0 111235789999999999999
Q ss_pred eCC
Q 011680 139 IGD 141 (479)
Q Consensus 139 v~~ 141 (479)
|..
T Consensus 69 V~a 71 (86)
T d1tdqa3 69 ITA 71 (86)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=95.96 E-value=0.13 Score=45.31 Aligned_cols=189 Identities=16% Similarity=0.196 Sum_probs=101.4
Q ss_pred eEEEEEecCCCCCChHHHH----HHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNSLSTL----KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l----~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||. .+....+.+ ..+ +++.||||..|.++-.+. -. . . +.+.++++ ..+- ..+.|||=+
T Consensus 1 MkiLfiGDI-vG~~Gr~~v~~~Lp~L-k~~~DfVIaNgENaa~G~-Gi-t-~---k~~~~L~~---~GVD-vIT~GNH~w 68 (252)
T d2z06a1 1 MRVLFIGDV-MAEPGLRAVGLHLPDI-RDRYDLVIANGENAARGK-GL-D-R---RSYRLLRE---AGVD-LVSLGNHAW 68 (252)
T ss_dssp CEEEEECCB-CHHHHHHHHHHHHHHH-GGGCSEEEEECTTTTTTS-SC-C-H---HHHHHHHH---HTCC-EEECCTTTT
T ss_pred CeEEEEecc-CCHHHHHHHHHHhHHH-HhhCCEEEEeeeccCCCc-CC-C-H---HHHHHHHH---hCCC-EEEcCcccc
Confidence 489999998 221222333 333 237899999999986543 11 1 1 22222221 2444 458999987
Q ss_pred ccCCCCCcccccccccccccCCcCCC-CCCCCceEEEEcCeEEEEEeec--CCCCCCCHHHHHHHHHHHhhcccCCCCeE
Q 011680 238 EFMPNMGEVIPFKSYLHRIATPYTAS-KSTNPLWYAIRRASAHIIVLSS--YSPYVKYTPQWWWLREELKKVDREKTPWL 314 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~f~~P~~~~-~~~~~~yysf~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 314 (479)
+... -..|.. ..+.--|.+-+ +..+..|+.|+.++.++.+++- +......+.-.+-+++.|++ .+++.+
T Consensus 69 dkke----i~~~i~-~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~---~~~~~i 140 (252)
T d2z06a1 69 DHKE----VYALLE-SEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEE---EKADYV 140 (252)
T ss_dssp SCTT----HHHHHH-HSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHH---CCCSEE
T ss_pred cchh----hhhhhc-cccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhh---cCccEE
Confidence 5321 111111 11222343332 2234557888887766666663 32222222334445555555 456788
Q ss_pred EEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEe-C
Q 011680 315 IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTV-G 393 (479)
Q Consensus 315 IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~-G 393 (479)
||=+|.=.- ....+| -++-.-+|.+|+-=|+|.----.++ -++|+-|++- |
T Consensus 141 ~VDfHaEaT-----------SEK~A~-g~~ldGrvsavvGTHTHV~TaD~rI----------------Lp~GTayiTDvG 192 (252)
T d2z06a1 141 LVEVHAEAT-----------SEKMAL-AHYLDGRASAVLGTHTHVPTLDATR----------------LPKGTLYQTDVG 192 (252)
T ss_dssp EEEEECSCH-----------HHHHHH-HHHHBTTBSEEEEESSCSCBSCCEE----------------CTTSCEEESCCC
T ss_pred EEEcccchh-----------hhheee-eEecCCCEEEEEecCccccccccEE----------------ecCCeEEEccCc
Confidence 888886321 112222 3455678999999999974322211 1578888883 5
Q ss_pred CCCCC
Q 011680 394 DGGNQ 398 (479)
Q Consensus 394 ~gG~~ 398 (479)
--|..
T Consensus 193 M~G~~ 197 (252)
T d2z06a1 193 MTGTY 197 (252)
T ss_dssp CBEES
T ss_pred cccch
Confidence 55543
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.0091 Score=46.73 Aligned_cols=73 Identities=10% Similarity=0.183 Sum_probs=43.3
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+.+|..+.+..-.. +++.|.|..+.... .-.|+|............ ... ........|++|+|+|
T Consensus 21 P~~P~~~~~~~~~~--~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~---~~~------~~~~~~~~i~~L~p~t 89 (117)
T d1wfoa1 21 PGPPMGILFPEVRT--TSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV---EVL------APSARQYTATGLKPES 89 (117)
T ss_dssp CCCCCCCEEEEECS--SEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE---EEE------CTTCCEEEEESCCSSS
T ss_pred CcCCCCcEEEEecC--CEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeE---Eec------CCceEEEEECCCCCCC
Confidence 34677777765443 69999998654322 235777665432221110 111 1112245789999999
Q ss_pred EEEEEeCC
Q 011680 134 KYYYKIGD 141 (479)
Q Consensus 134 ~Y~Y~v~~ 141 (479)
.|.+||..
T Consensus 90 ~Y~~~V~A 97 (117)
T d1wfoa1 90 VYLFRITA 97 (117)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999874
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.86 E-value=0.0047 Score=47.16 Aligned_cols=75 Identities=17% Similarity=0.316 Sum_probs=43.7
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..+.+..-.. +++.|+|.-+.... .-.|+|......... .+........ ..-..+++|.||+|++.|
T Consensus 5 ~P~~~~~~~~~~--~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y 77 (103)
T d1qg3a2 5 EPGRLAFNVVSS--TVTQLSWAEPAETNGEITAYEVCYGLVNDDNRP--IGPMKKVLVD---NPKNRMLLIENLRESQPY 77 (103)
T ss_dssp CCCCCEEEEEET--TEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCB--CSCCEEEEEC---CTTCCEEEECCCCTTCCE
T ss_pred cCCCcEEEEecC--CEEEEEEEECccCCCCceEEEEEeecccccccc--ccceEEEEec---CCCceEEEEeecCCCCEE
Confidence 677777765443 59999999764322 235666655432211 1111111111 112246789999999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
.+||..
T Consensus 78 ~~~V~A 83 (103)
T d1qg3a2 78 RYTVKA 83 (103)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999874
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.73 E-value=0.012 Score=45.86 Aligned_cols=83 Identities=13% Similarity=0.250 Sum_probs=50.4
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+.+|..+++..+. +++.|.|.-....+ .-.|+|+....... .. . ...-....+|.+|+|++
T Consensus 21 P~~P~~~~~~~~~---~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~~-~~-----~------~~~~~~~~~i~~L~p~t 85 (113)
T d1x5ia1 21 PEVPSSLHVRPLV---TSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQ-TI-----K------VDYKQRYYTIENLDPSS 85 (113)
T ss_dssp CCSCSEEEEEEET---TEEEEEEECCSCTTBCCCEEEEEECSSCGGGE-EE-----E------CCTTCCEEEECSCCSSC
T ss_pred CCCCEeeeeeeCC---CEEEEEEEccccCCccEEEEEEEeeeccccce-ee-----e------eeCCccEEEEeccccCc
Confidence 3478888887543 58999999654332 23566655432111 11 1 11223456899999999
Q ss_pred EEEEEeCC----CCccc-eEEEECCCC
Q 011680 134 KYYYKIGD----GDSSR-EFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~----g~~~~-~~~F~T~p~ 155 (479)
.|.++|.. |.+.+ .-.++|.|.
T Consensus 86 ~Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 86 HYVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp EECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred EEEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 99999874 44321 345777774
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.70 E-value=0.021 Score=45.16 Aligned_cols=86 Identities=20% Similarity=0.202 Sum_probs=49.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCc----cEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGS----NRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..|.+....+ +++.|.|.-...... ..++|............-. . ........|.+|+|++.
T Consensus 18 ~~P~~~~v~~~~~--~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~i~~L~p~t~ 86 (127)
T d1ueya_ 18 NPPFDLELTDQLD--KSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT-E--------VSGTQTTAQLNLSPYVN 86 (127)
T ss_dssp CCCEEEEEECCSS--SCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE-E--------EESSCCEEEECCCTTCE
T ss_pred cCCCCcEEEEecC--CeEEEEEeCCcccccceEeeeeeeccccccceeEEEEe-e--------cCCceEEEECCCccCCE
Confidence 4788888875554 699999986653322 2444444332222211110 0 11123456789999999
Q ss_pred EEEEeCC----CCc--c-ceEEEECCCC
Q 011680 135 YYYKIGD----GDS--S-REFWFQTPPK 155 (479)
Q Consensus 135 Y~Y~v~~----g~~--~-~~~~F~T~p~ 155 (479)
|.+||.. |.+ + ....++|.+.
T Consensus 87 Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 87 YSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp ECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 9999874 432 2 2345777664
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.69 E-value=0.027 Score=41.87 Aligned_cols=58 Identities=21% Similarity=0.461 Sum_probs=36.5
Q ss_pred CCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 73 GKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 73 ~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
.+++.|+|.-+.... .-.|+|........... .. .......+|++|+|+|.|.+||..
T Consensus 13 ~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~~V~A 74 (94)
T d2dn7a1 13 MNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-----DF------GKDDQHFTVTGLHKGTTYIFRLAA 74 (94)
T ss_dssp TTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-----EE------ETTCCEEEEECCCTTCEEEEEEEE
T ss_pred CCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEE-----Ec------CCCccEEEEEccCCeeEEEEEEEE
Confidence 368999999764322 23577776654332211 11 111234578999999999999874
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=95.62 E-value=0.22 Score=43.99 Aligned_cols=186 Identities=18% Similarity=0.182 Sum_probs=102.0
Q ss_pred eEEEEEecCCCCCChHHHH----HHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNSLSTL----KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l----~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||. .+......+ ..+ +++.||||..|.++-.+. .-..+.+.++++ ..+- ..+.|||=+
T Consensus 1 MkILfiGDI-vG~~Gr~~v~~~Lp~l-k~~~DfVIaNgENaa~G~------Git~~~~~~l~~---~GvD-viT~GNH~w 68 (255)
T d1t70a_ 1 MRVLFIGDV-FGQPGRRVLQNHLPTI-RPQFDFVIVNMENSAGGF------GMHRDAARGALE---AGAG-CLTLGNHAW 68 (255)
T ss_dssp CEEEEECCB-BHHHHHHHHHHHHHHH-GGGCSEEEEECTBTTTTS------SCCHHHHHHHHH---HTCS-EEECCTTTT
T ss_pred CeEEEEecC-CCHHHHHHHHHHhHHH-HhhCCEEEECCccCCCCc------CCCHHHHHHHHH---cCCc-EEEcCchhh
Confidence 479999998 221222333 333 237899999999986543 111222333322 2444 458999987
Q ss_pred ccCCCCCccccccccc----ccccCCcCCC--CCCCCceEEEEcCeEEEEEeec--CCCCCCCHHHHHHHHHHHhhcccC
Q 011680 238 EFMPNMGEVIPFKSYL----HRIATPYTAS--KSTNPLWYAIRRASAHIIVLSS--YSPYVKYTPQWWWLREELKKVDRE 309 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~----~~f~~P~~~~--~~~~~~yysf~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~ 309 (479)
+.. ....|. .+..-|.+-+ ...+..|+.++..+.++.+++- +......+.-.+-+++.|++ .
T Consensus 69 dkk-------ei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~~---~ 138 (255)
T d1t70a_ 69 HHK-------DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLER---D 138 (255)
T ss_dssp SST-------THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTC---S
T ss_pred cch-------hHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHhh---c
Confidence 421 111221 1222333321 2335567788887766666653 33222323334556667765 4
Q ss_pred CCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeE
Q 011680 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVY 389 (479)
Q Consensus 310 ~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~y 389 (479)
+.+.+||=+|.=.- ....+| -++-.-+|.+|+-=|+|.----.++. ++|+-|
T Consensus 139 ~~~~i~VDfHaEaT-----------SEK~A~-g~~ldGrvsav~GTHTHV~TaD~rIl----------------p~GTay 190 (255)
T d1t70a_ 139 DLGTVFVDFHAEAT-----------SEKEAM-GWHLAGRVAAVIGTHTHVPTADTRIL----------------KGGTAY 190 (255)
T ss_dssp SCCEEEEEEECSCH-----------HHHHHH-HHHHTTSSSEEEEESSCSCBSCCEEE----------------TTTEEE
T ss_pred CCCeEEEEccchhH-----------HHHHHH-HhhhcCcEEEEEecCcccccccceEe----------------cCCcEE
Confidence 56678888886321 112222 34556789999999999743222221 567788
Q ss_pred EEe-CCCCC
Q 011680 390 LTV-GDGGN 397 (479)
Q Consensus 390 i~~-G~gG~ 397 (479)
++- |--|.
T Consensus 191 ~TDvGMtG~ 199 (255)
T d1t70a_ 191 QTDAGFTGP 199 (255)
T ss_dssp ESCCCCBEE
T ss_pred EecCccccc
Confidence 873 54444
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.61 E-value=0.024 Score=44.27 Aligned_cols=84 Identities=21% Similarity=0.418 Sum_probs=49.9
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC--Ccc----EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCc
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL--GSN----RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~--~~~----~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t 133 (479)
+|..|.+.... .+++.|.|...... ... .|+|....+. .. ... ....+....+.|+||+|+|
T Consensus 14 ~P~~v~~~~~~--~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~------~~--~~~--~~~~~~~~~~~i~~L~p~t 81 (119)
T d1x5ha1 14 APQNLSLEVRN--SKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SD--VTE--TLVSGTQLSQLIEGLDRGT 81 (119)
T ss_dssp CCEEEEEECCS--SSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EE--EEC--CBCCTTCCEEEEECCCSSC
T ss_pred CCcCeEEEEec--CcEEEEEEEcccccCCCCCEEEEEEEEeecccc------cc--eee--eecCCCccEEEeCCCCCCC
Confidence 68888877544 36999999875321 112 2344333211 00 000 0112234567899999999
Q ss_pred EEEEEeCC----C--CccceEEEECCCC
Q 011680 134 KYYYKIGD----G--DSSREFWFQTPPK 155 (479)
Q Consensus 134 ~Y~Y~v~~----g--~~~~~~~F~T~p~ 155 (479)
.|.++|.. | ..|....|+|++.
T Consensus 82 ~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 82 EYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 99999864 3 3455778999763
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.58 E-value=0.012 Score=46.20 Aligned_cols=70 Identities=13% Similarity=0.119 Sum_probs=39.6
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|..+.+..-. .+++.|+|.-..... .-.|+|............. .. .-....+|++|+|+|.|
T Consensus 18 pP~~~~v~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~-----~~~~~~~v~~L~p~t~Y 85 (117)
T d1uema_ 18 PPSKPQVTDVT--KNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA-----NH-----VKTTLYTVRGLRPNTIY 85 (117)
T ss_dssp CCCCCEEEEEC--SSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE-----EE-----ECSSEEEECSCCTTCEE
T ss_pred CCCCCEEEEcc--CCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEec-----cc-----cccccceECCCCCCCEE
Confidence 56666666433 368999997443222 2355665543221111100 00 01124578999999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
.+||..
T Consensus 86 ~frV~A 91 (117)
T d1uema_ 86 LFMVRA 91 (117)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999974
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.57 E-value=0.009 Score=47.04 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=25.7
Q ss_pred EEEecCCCCCcEEEEEeCC----CC--ccceEEEECCCC
Q 011680 123 HCLVDDLEYDTKYYYKIGD----GD--SSREFWFQTPPK 155 (479)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~----g~--~~~~~~F~T~p~ 155 (479)
.++|++|+|+|.|.+||.. |. .++...++|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 3578999999999999875 43 356778888764
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.52 E-value=0.0077 Score=48.66 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=26.8
Q ss_pred EEEEecCCCCCcEEEEEeCC------CCccceEEEECCCC
Q 011680 122 HHCLVDDLEYDTKYYYKIGD------GDSSREFWFQTPPK 155 (479)
Q Consensus 122 h~v~l~gL~p~t~Y~Y~v~~------g~~~~~~~F~T~p~ 155 (479)
..++|+||+|+|.|.+||.. |..++...|+|++.
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 35789999999999999875 34456777999764
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=95.40 E-value=0.15 Score=45.78 Aligned_cols=172 Identities=17% Similarity=0.133 Sum_probs=92.0
Q ss_pred CCeEEEEEecCCCCCChH----HHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCC
Q 011680 160 APYTFGIIGDLGQTYNSL----STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (479)
Q Consensus 160 ~~~~f~~~gD~~~~~~~~----~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GN 234 (479)
...|++++||. .+.... ..|..+.+. ++||||..|-++-.+. .--.+.+.++++ ..+- ..+.||
T Consensus 3 ~~MkILfiGDI-vG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~------Git~k~~~eL~~---~GvD-vIT~GN 71 (281)
T d1t71a_ 3 NSIKFIFLGDV-YGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGK------GLSLKHYEFLKE---AGVN-YITMGN 71 (281)
T ss_dssp CCCEEEEECEE-BHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTS------SCCHHHHHHHHH---HTCC-EEECCT
T ss_pred ccceEEEEEcc-CCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCCCc------CCCHHHHHHHHH---hCCc-EEEcCc
Confidence 35899999998 221112 234555555 9999999999986543 111122222221 2444 458999
Q ss_pred cccccCCCCCcccccccccccccCCcCC----C-CCCCCceEEEEcCeEEEEEeec--CCCCCC--CHHHHHHHHHHHhh
Q 011680 235 HEIEFMPNMGEVIPFKSYLHRIATPYTA----S-KSTNPLWYAIRRASAHIIVLSS--YSPYVK--YTPQWWWLREELKK 305 (479)
Q Consensus 235 HD~~~~~~~~~~~~~~~~~~~f~~P~~~----~-~~~~~~yysf~~g~v~fi~Lds--~~~~~~--~~~Q~~WL~~~L~~ 305 (479)
|=++... ...+-.-..+.--|.+- + ...+..|..++..+..+.+++- ...... ......-+++.+.+
T Consensus 72 H~wd~ke----i~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~ 147 (281)
T d1t71a_ 72 HTWFQKL----DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK 147 (281)
T ss_dssp TTTCCGG----GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT
T ss_pred hhhhchh----hHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHHhhcc
Confidence 9864210 00110111122223332 1 2234557888887656666554 222111 12233445555544
Q ss_pred cccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 306 VDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 306 ~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
.+++.+||=+|.=.- ....+| -++-.-+|.+|+-=|+|.--
T Consensus 148 ---~~~d~i~VDfHaEAT-----------SEK~A~-g~~lDGrvsaVvGTHTHV~T 188 (281)
T d1t71a_ 148 ---RDCDLHIVDFHAETT-----------SEKNAF-CMAFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp ---CCCSEEEEEEECSCH-----------HHHHHH-HHHHTTTSSEEEEESSSSCC
T ss_pred ---cCCCeEEEEeccchh-----------hhhhhh-eeeeCCcEEEEEecCccccc
Confidence 467788888886321 112222 34556789999999999743
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.16 E-value=0.014 Score=44.44 Aligned_cols=58 Identities=19% Similarity=0.248 Sum_probs=35.2
Q ss_pred CcEEEEEEcCCCC-----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 74 KAVIISWVTPNEL-----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 74 ~~~~i~W~t~~~~-----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
+++.|+|..+... ..-.|+|............ ........++++||+|+|+|.|||..
T Consensus 17 ~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~frV~A 79 (104)
T d1bpva_ 17 HTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKAN----------FSNILENEFTVSGLTEDAAYEFRVIA 79 (104)
T ss_dssp TEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECC----------CSCCCSSEEEECSCCSSCCEEEEEEE
T ss_pred CEEEEEEEeccccCcceEEEEEEEeecccccceeEEE----------eeccceeEEEEcCCCCCCEEEEEEEE
Confidence 6999999865322 1246666665433221110 01122335678999999999999875
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.09 E-value=0.041 Score=41.84 Aligned_cols=72 Identities=17% Similarity=0.114 Sum_probs=43.8
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC------CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE------LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~------~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..|.+.... .+++.|+|.-... ...-.|.|........... ... .......++|.+|+|+
T Consensus 6 ~~P~~v~~~~~~--~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~----~~~-----~~~~~~~~~i~~L~p~ 74 (105)
T d1cfba2 6 KNPDNVVGQGTE--PNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN----NNI-----FDWRQNNIVIADQPTF 74 (105)
T ss_dssp CCCSCCEEECSS--TTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEE----EEE-----CCTTCCEEEECSCCSS
T ss_pred CCCcCeEEEEcc--CCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeE----EEe-----cCCCccEEEECCCCCC
Confidence 367778877544 3699999974321 1233577766543322111 010 1233446789999999
Q ss_pred cEEEEEeCC
Q 011680 133 TKYYYKIGD 141 (479)
Q Consensus 133 t~Y~Y~v~~ 141 (479)
|.|.++|..
T Consensus 75 t~Y~~~V~A 83 (105)
T d1cfba2 75 VKYLIKVVA 83 (105)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999875
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.74 E-value=0.034 Score=42.37 Aligned_cols=71 Identities=13% Similarity=0.204 Sum_probs=42.6
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..+.+.--. .+++.|+|....... .-.|+|........... .. ...-.....|+||+|+|.
T Consensus 12 ~~p~~l~~~~~~--~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~----~~------~~~~~~~~~i~~L~p~t~ 79 (106)
T d1wfna1 12 GPVGHLSFSEIL--DTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVT----HY------LPNVTLEYRVTGLTALTT 79 (106)
T ss_dssp CCCSCCEEESCC--SSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCC----EE------ECSSCCEEEEESCCTTCE
T ss_pred cCCCCcEEEEec--CCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEE----Ee------cCCCeeEEEEccCCCCCE
Confidence 367777776433 369999998654322 23566765543211100 00 112234568899999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|.++|..
T Consensus 80 Y~~~V~A 86 (106)
T d1wfna1 80 YTIEVAA 86 (106)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.56 E-value=0.028 Score=41.61 Aligned_cols=59 Identities=17% Similarity=0.279 Sum_probs=37.3
Q ss_pred CCcEEEEEEcCCCC-CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 73 GKAVIISWVTPNEL-GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 73 ~~~~~i~W~t~~~~-~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
.+++.|.|..+... ..-.|+|....+...... ... ++-...+.|+||+|||.|.++|..
T Consensus 10 ~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~----~~~------~~~~t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 10 PTSLLISWDAPAVTVRYYRITYGETGGNSPVQE----FTV------PGSKSTATISGLKPGVDYTITVYA 69 (91)
T ss_dssp SSCEEEECCCCSSCCSEEEEEEEETTCCSCCEE----EEE------ETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCEEEEEEEccceEecEEEEEEEcCCCCceeEE----EEe------CCCccEEEeCCCCCCCEEEEEEEE
Confidence 36999999865433 345778877654322111 000 112235789999999999999864
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.82 E-value=0.15 Score=38.45 Aligned_cols=78 Identities=8% Similarity=-0.014 Sum_probs=45.0
Q ss_pred CCCceEE-EeecCCCCCcEEEEEEcCCCCC---ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVR-ITQGDYDGKAVIISWVTPNELG---SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~-lt~~~~~~~~~~i~W~t~~~~~---~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|..|. ++- .. .++|+++|....... ...+.|............-..... .........+.+++|+|++.
T Consensus 6 ~~P~~v~~i~~-~~-~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~t~ 80 (107)
T d1cd9b1 6 ASPSNLSCLMH-LT-TNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCV---AKKRQNNCSIPRKNLLLYQY 80 (107)
T ss_dssp CCCEEEEEEEE-TT-TTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEE---CCTTCCEEEEEGGGCCTTSC
T ss_pred CCCcCCEEEEe-cC-CCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeec---cccCccccEEEcCCCCcCce
Confidence 3777777 443 22 369999998664332 335566554432211110000011 11234566789999999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|.+||..
T Consensus 81 Y~frV~A 87 (107)
T d1cd9b1 81 MAIWVQA 87 (107)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999985
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.65 E-value=0.038 Score=41.53 Aligned_cols=68 Identities=21% Similarity=0.312 Sum_probs=37.7
Q ss_pred CceEEEeecCCCCCcEEEEEEcCCCCC-----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 61 PQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 61 P~~v~lt~~~~~~~~~~i~W~t~~~~~-----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
|..|+++.++ +++.|.|..+.... .-.|+|....+......... . .-...++|.+|+|++.|
T Consensus 8 Pp~l~v~~~~---~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~--~--------~~~~~~~l~~L~p~t~Y 74 (100)
T d2gysa4 8 PPSLQVTKDG---DSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTET--L--------QNAHSMALPALEPSTRY 74 (100)
T ss_dssp CCEEEEC------CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEE--E--------ESCSEEECCCCCSSCCC
T ss_pred CCccEEEECC---CEEEEEEecCcccCCccceEEEEEEeecccceeceeecc--c--------CCceEEEeCCCCCCCeE
Confidence 3357776543 58999999875432 24677776543321111000 0 11235789999999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
.+||..
T Consensus 75 ~~rVRa 80 (100)
T d2gysa4 75 WARVRV 80 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.83 E-value=0.23 Score=45.92 Aligned_cols=65 Identities=15% Similarity=0.194 Sum_probs=38.2
Q ss_pred EEEEEecCCCCCChHHHHHHHHH-h--CCC--EEEEcCcccccCCCCCCchhhhHHHHHHHHH-HHhhcCCeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQ-S--GGQ--SVLFLGDLSYADRYEYNDVGIRWDSWGRFIE-QSAAYQPWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~-~--~pD--~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~-~l~~~~P~~~v~GNHD 236 (479)
.+.++||+|.. ...+-++.+ . .++ -.|++||+++.+. ...+...-.+. .+.-..-++...||||
T Consensus 61 pv~VvGDiHGq---~~DL~~if~~~g~p~~~~~ylFLGDYVDRG~-------~slEvi~lL~~lKi~yP~~v~LLRGNHE 130 (324)
T d1s95a_ 61 KITVCGDTHGQ---FYDLLNIFELNGLPSETNPYIFNGDFVDRGS-------FSVEVILTLFGFKLLYPDHFHLLRGNHE 130 (324)
T ss_dssp EEEEECCCTTC---HHHHHHHHHHHCCCBTTBCEEEESCCSSSST-------THHHHHHHHHHHHHHSTTTEEEECCTTS
T ss_pred CEEEEEECCCC---HHHHHHHHHHCCCCCCCCeEEEecccccCcC-------cceeehHHHHHHHHhCCCcEEeccCCcc
Confidence 68899999865 233334433 3 232 4899999998754 12222221111 1122335899999999
Q ss_pred c
Q 011680 237 I 237 (479)
Q Consensus 237 ~ 237 (479)
.
T Consensus 131 ~ 131 (324)
T d1s95a_ 131 T 131 (324)
T ss_dssp S
T ss_pred c
Confidence 6
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.34 E-value=0.27 Score=44.62 Aligned_cols=65 Identities=18% Similarity=0.268 Sum_probs=38.0
Q ss_pred EEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHH-HHhhcCCeEEcCCCcccc
Q 011680 164 FGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIE-QSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 164 f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~-~l~~~~P~~~v~GNHD~~ 238 (479)
+.++||+|.. ...+-++.+. .-.-.|++||+++.+.+ .-+...-.+. .+.-..-++...||||..
T Consensus 47 v~VvGDlHG~---~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~-------slEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 47 VTVCGDVHGQ---FHDLMELFRIGGKSPDTNYLFMGDYVDRGYY-------SVETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp EEEECBCTTC---HHHHHHHHHHHCCTTTSCEEECSCCCCSSSS-------HHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred eEEEeeCCCC---HHHHHHHHHhcCCCccceEEecCcccCCCCc-------ceeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 8899999864 3334444443 22458899999987652 1122211111 112234589999999963
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.32 E-value=0.031 Score=43.98 Aligned_cols=23 Identities=17% Similarity=0.028 Sum_probs=18.9
Q ss_pred ceEEEEEecCCCCCcEEEEEeCC
Q 011680 119 GYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 119 ~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
.......|+||+|+|.|.++|..
T Consensus 79 ~~~~~~~l~~L~p~T~Y~~~V~A 101 (125)
T d2dtge3 79 QNHPGWLMRGLKPWTQYAIFVKT 101 (125)
T ss_dssp SSCCEEEECSCCSSCBCCBEEEE
T ss_pred CccCEEEECCCccCCEEEEEEEE
Confidence 34456789999999999999874
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.14 E-value=0.0055 Score=46.97 Aligned_cols=87 Identities=16% Similarity=0.217 Sum_probs=43.9
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEe
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKI 139 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v 139 (479)
.|..|....-. .+++.|+|..+.......+.|...=............. .......+.+.|.+|+|++ |.+||
T Consensus 7 ~P~~v~~~~~~--~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~----~~~~~~~~~~~~~~L~~~t-Y~~rV 79 (102)
T d2dtge1 7 IVGPVTHEIFE--NNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDT----RKHFALERGCRLRGLSPGN-YSVRI 79 (102)
T ss_dssp CCCCCCCCSSS--SSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCC----SSSCCCTTCCCCCSCCSSE-ECCCC
T ss_pred CCCCCEEEEEC--CCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeee----eecccceEEEEEeccceee-EEEEE
Confidence 34444443322 36889999866544444555544211000000000000 0112334567889999975 99998
Q ss_pred CC------CCccceEEEECC
Q 011680 140 GD------GDSSREFWFQTP 153 (479)
Q Consensus 140 ~~------g~~~~~~~F~T~ 153 (479)
.. |..|..-.|.|+
T Consensus 80 ~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 80 RATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp CEEETTBCCCCCCCCEECCC
T ss_pred EEEcCCccCCCCCCEEEEcc
Confidence 74 344555666664
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=90.99 E-value=0.31 Score=44.40 Aligned_cols=65 Identities=20% Similarity=0.283 Sum_probs=38.0
Q ss_pred EEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHH-HHhhcCCeEEcCCCcccc
Q 011680 164 FGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIE-QSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 164 f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~-~l~~~~P~~~v~GNHD~~ 238 (479)
+.++||+|.. ...+-++.+. .-.-.|++||+++.+. ...+...-.+. .+.-..-++...||||..
T Consensus 54 v~VvGDiHG~---~~DL~~if~~~g~p~~~~ylFLGDYVDRG~-------~slE~i~lL~aLKi~~P~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 54 LKICGDIHGQ---YYDLLRLFEYGGFPPESNYLFLGDYVDRGK-------QSLETICLLLAYKIKYPENFFLLRGNHECA 123 (294)
T ss_dssp EEEECBCTTC---HHHHHHHHHHHCCTTSSCEEECSCCSSSSS-------CHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred eEEEEECCCC---hHhHHHHHhhcCCCccceEEeeccccCCCc-------cchHHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 7899999854 2333334333 2345889999998754 12222222111 112234489999999964
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.90 E-value=0.14 Score=37.98 Aligned_cols=67 Identities=13% Similarity=0.157 Sum_probs=36.5
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC--------ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG--------SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~--------~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~ 130 (479)
.+|+.|.+....++ +.+.|+|..+.... .-.|+|....+.......-. +. ++..|.
T Consensus 3 dPP~nl~v~~~~~~-~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~~----------~~-----t~~~L~ 66 (94)
T d3d85d3 3 DPPKNLQLKPLKNS-RQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFT----------DK-----TSATVI 66 (94)
T ss_dssp CCCEEEEEEEC-----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEEE----------SS-----SEEEEC
T ss_pred CCCcccEEEEecCC-CeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEeccc----------cc-----eEEEec
Confidence 47888888765443 57999999875321 13566665443222211110 01 123588
Q ss_pred CCcEEEEEeCC
Q 011680 131 YDTKYYYKIGD 141 (479)
Q Consensus 131 p~t~Y~Y~v~~ 141 (479)
|++.|.+||..
T Consensus 67 p~~~Y~v~VRa 77 (94)
T d3d85d3 67 CRKNASISVRA 77 (94)
T ss_dssp CCSSCEEEEEE
T ss_pred CCCCEEEEEEE
Confidence 99999999875
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.31 E-value=0.57 Score=34.30 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=40.6
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCCcc--EEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELGSN--RVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~--~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
+|..|.+.... ..++|+|..+...+.. .++|............... . .........+.+|.+++.|++
T Consensus 3 ~P~nv~v~s~n---~~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~l~~~~~Y~f 72 (98)
T d1fyhb1 3 TPTNVTIESYN---MNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACI-N------ISHHYCNISDHVGDPSNSLWV 72 (98)
T ss_dssp CCEEEEEECBS---SCCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEE-E------ESSSEEECGGGCCSTTSCEEE
T ss_pred cCCceEEEEeC---CcEEEEECCCCCCCCCceeEEEEEeccccceeEEeee-e------cccceeeeEecccCCCCEEEE
Confidence 57778776433 3568999976543333 2333333322221111110 0 123344567889999999999
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
||..
T Consensus 73 RV~A 76 (98)
T d1fyhb1 73 RVKA 76 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.96 E-value=0.094 Score=40.70 Aligned_cols=73 Identities=18% Similarity=0.210 Sum_probs=43.9
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC------CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE------LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~------~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.+|..|.+..+..+ +++.|+|.-... .....+.|....+..... . .. ....-...++|+||+|+
T Consensus 12 ~pP~~v~v~~~~s~-~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~~---~---~~---~~~~~~~~~~i~~L~~~ 81 (117)
T d2cspa1 12 APPQDVTVQAGVTP-ATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVA---E---VI---FPTADSTAVELVRLRSL 81 (117)
T ss_dssp CCCEEEEECCCSST-TEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEEE---E---EC---CTTCSEEEEESHHHHHH
T ss_pred CCCCccEEEEecCC-CEEEEEEcCCCccccCcccccceEEEEEEeecccce---e---ee---eeccceeeeeccCCCCC
Confidence 47888877654333 589999986421 123466786643221110 0 00 11233456789999999
Q ss_pred cEEEEEeCC
Q 011680 133 TKYYYKIGD 141 (479)
Q Consensus 133 t~Y~Y~v~~ 141 (479)
|.|.++|..
T Consensus 82 t~Y~v~V~A 90 (117)
T d2cspa1 82 EAKGVTVRT 90 (117)
T ss_dssp TCSCBEEEE
T ss_pred cEEEEEEEE
Confidence 999999874
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.95 E-value=0.4 Score=36.67 Aligned_cols=54 Identities=13% Similarity=0.206 Sum_probs=31.0
Q ss_pred CcEEEEEEcCCCC--C----ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 74 KAVIISWVTPNEL--G----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 74 ~~~~i~W~t~~~~--~----~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
+++.|.|...... . .-.|+|........... .. . ....+.+|+|+|.|.+||..
T Consensus 32 ~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~~~~~~-~~-----------~--~~~~~~~L~p~t~Y~~~V~A 91 (117)
T d1wj3a_ 32 TKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVL-NT-----------N--KTSAELVLPIKEDYIIEVKA 91 (117)
T ss_dssp TEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEE-EE-----------S--SSEEEEECCCSSCEEEEEEE
T ss_pred CEEEEEEeecccccCCCceeEEEEEEEecCCCceeee-ec-----------e--eeEEEeeccCCcEEEEEEEE
Confidence 6899999864321 1 23555655443222211 11 0 11245589999999999874
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.07 E-value=0.49 Score=45.68 Aligned_cols=26 Identities=12% Similarity=0.097 Sum_probs=21.6
Q ss_pred HHHHHHHHHHcCCcEEEEccccccee
Q 011680 337 RAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 337 r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
.+++...+++.+.++++-||.=.-+-
T Consensus 249 ~~a~~~FL~~n~L~~IIR~HE~~~~G 274 (473)
T d1auia_ 249 YPAVCEFLQHNNLLSILRAHEAQDAG 274 (473)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCTTS
T ss_pred hHHHHHHHHHcCCcEEEEcCcchhhh
Confidence 46788899999999999999975443
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.91 E-value=0.4 Score=35.17 Aligned_cols=71 Identities=10% Similarity=0.084 Sum_probs=42.1
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCC---ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELG---SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~---~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
.+|..|.+.... .++++++|.-..... .-.|+|........... .. .+.-.....+.+|+|++.|
T Consensus 5 ~~P~n~~~~~~~--~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~------~~----~~~~~~~~~~~~L~~~~~Y 72 (95)
T d1bqua1 5 EKPKNLSCIVNE--GKKMRCEWDGGRETHLETNFTLKSEWATHKFADCK------AK----RDTPTSCTVDYSTVYFVNI 72 (95)
T ss_dssp CCCEEEEEEEET--TSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEE------CC----SSCTTEEECSSCCCTTSCE
T ss_pred CCCeeeEEEEcc--CCEEEEEEeCcccCCCceEEEEEEEEcccceeEee------cc----cccceeeeeeeecCCCcEE
Confidence 478888887654 368999999765332 34566655432111110 00 0111122356799999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
++||..
T Consensus 73 ~f~V~A 78 (95)
T d1bqua1 73 EVWVEA 78 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.71 E-value=0.51 Score=38.38 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=24.6
Q ss_pred EEEEecCCCCCcEEEEEeCC----CC-----ccceEEEECCC
Q 011680 122 HHCLVDDLEYDTKYYYKIGD----GD-----SSREFWFQTPP 154 (479)
Q Consensus 122 h~v~l~gL~p~t~Y~Y~v~~----g~-----~~~~~~F~T~p 154 (479)
.+.+|+||+|+|.|.++|.. |. .+..-.++|+|
T Consensus 155 ~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 155 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 35789999999999999863 21 13466788876
|