Citrus Sinensis ID: 011685

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------48
MNRKPKPISPPMSPPPLPSIPNSQSHKTLTPISLMARKSSLLKQTLIVLALFILAVYAFVNTFFSPPVAADADPAFNKLSQQNSNIEFKSSKVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLSRPESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKDVVIPYSHRINTYTGDPRVDNRNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQKLPLIKIMINRDKRLVRRESSEPVCSSLCTNQSGLITSL
ccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEcccccccHHHHHHccccccccccccccccccccccccccHHHHHHHcccccHHHcccccEEEccccccccEEEEEcccEEEEEEEcccccccccccHHHHHHHHHHHHHccccccccccccEEEEEccccHHHHHHHHHcccEEEEEcccccccccccccccccccccccccccccccccccccEEEEEcccccccccccHHHHHHHHHHcccccEEEcccccccccccccccccccEEEEccccccccccHHHHHHHcccEEEEEEcccccccccccccccEEEEEEccccccccHHHHHHccccHHHHHHHHHHHHHHHHcEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccc
ccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHcHHHHccccccccccEEEEEEcccccccHHHHHcccccccccccccccccccccccccccHHHHHHHHHHccccccccccEEEEccHHHccEEEEEcHHHHHHHHHccccccccccHHHHHHHHHHHHHHccHHHHccccccEEEEEcccccHHHHHHHHHccEEEEccccccccccccccccEEEccccEEcccccccccccccEEEEEcccccccccccHHHHHHHHHccccccEEEEcccccccHHHHHHHHcccEEEEcccccccccHHHHHHHHHccccEEEEcccEcccccccccccEEEEEEHHHcccccHHHHHHHcccHHHHHHHHHHHHHHHccEEccccccHHHHHHHHHHHHHHHHHHHHHHHccEEccccccccEEEEEcccccHEccc
mnrkpkpisppmsppplpsipnsqshktltpISLMARKSSLLKQTLIVLALFILAVYAFVntffsppvaadadpafnklsqqnsniefksSKVKVYMYnlprkftygiieqhsmargglvgpvadvsmlkypghqhmgewyvfsdlsrpeservgspvvkvtdpgeadlffvpVFSSLSLVVnvggpaaahrysdEEMQEELVEWLEQQEYWRrnngrdhviiagdpnAMLRVMDRIKNAVLLVSDfgrlrvdqgslvkdvvipyshrintytgdprvdnrNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQSRESRRAATqgmhtskfclnpagdtpsaCRLFDAIVSLCVPVivsdsielpfedviDYRKIAVFVEtsaatkpgfLISTLRAVTPDRILEYQRELKKVQRYFiydhpngaVNEIWREVSQKLPLIKIMINRDkrlvrressepvcsslctnqsglitsl
mnrkpkpisppmsppplpsipnsQSHKTLTPISLMARKSSLLKQTLIVLALFILAVYAFVNTFFSPPVAADADPAFNKlsqqnsniefksskVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLSRPESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVSDfgrlrvdqgslvkdvvipyshrintytgdprvdnrNTLLFFMGNRYRKEGGKIRDLLFNILETEedvvikhgtqsresrraATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVetsaatkpgflistlravtpdRILEYQRELKKVQRYFIYDHPNGAVNEIWRevsqklplikiminrdkrlvrressepvcsslctnqsglitsl
MNRKpkpisppmsppplpsipnsqsHKTLTPISLMARKSSLLKQTLIVLALFILAVYAFVNTFFSPPVAADADPAFNKLSQQNSNIEFKSSKVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLSRPESERVGSPVVKVTDPGEADlffvpvfsslslvvnvGGPAAAHRYSDeemqeelvewleqqeYWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKDVVIPYSHRINTYTGDPRVDNRNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQKLPLIKIMINRDKRLVRRESSEPVCSSLCTNQSGLITSL
*************************************KSSLLKQTLIVLALFILAVYAFVNTFFSPPVAAD***************EFKSSKVKVYMYNLPRKFTYGII****************VSMLKYPGHQHMGEWYVFSDL***********VVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKDVVIPYSHRINTYTGDPRVDNRNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIK*******************KFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQKLPLIKIMINRDKRLV***********************
***************************************SLLKQTLIVLALFILAVYAFVNTFF**************************SKVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLSRPESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKDVVIPYSHRINTYTGDPRVDNRNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQKLPLIKIMINRDKR*****SSEPVCSSLCTNQ*******
**********PMSPPPLPSIPNSQSHKTLTPISLMARKSSLLKQTLIVLALFILAVYAFVNTFFSPPVAADADPAFNKLSQQNSNIEFKSSKVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLS***********VKVTDPGEADLFFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKDVVIPYSHRINTYTGDPRVDNRNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVI****************MHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQKLPLIKIMINRDKRL***********SLCTNQSGLITSL
**********************************MARKSSLLKQTLIVLALFILAVYAFVNTFFSPPVAADADPAFNKLSQQNSNIEFKSSKVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLSRPESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKDVVIPYSHRINTYTGDPRVDNRNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQKLPLIKIMINRDKRLVRRESSEPVCSSLCTNQSG*****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNRKPKPISPPMSPPPLPSIPNSQSHKTLTPISLMARKSSLLKQTLIVLALFILAVYAFVNTFFSPPVAADADPAFNKLSQQNSNIEFKSSKVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLSRPESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKDVVIPYSHRINTYTGDPRVDNRNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQKLPLIKIMINRDKRLVRRESSEPVCSSLCTNQSGLITSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query479 2.2.26 [Sep-21-2011]
Q9LFP3480 Probable glycosyltransfer no no 0.567 0.566 0.268 4e-19
Q940Q8415 Probable beta-1,4-xylosyl no no 0.649 0.749 0.255 5e-18
Q8S1X9422 Probable glucuronosyltran no no 0.659 0.748 0.270 5e-18
Q3E9A4466 Probable glycosyltransfer no no 0.559 0.575 0.256 8e-17
Q6H4N0434 Probable glucuronosyltran no no 0.649 0.716 0.244 8e-17
Q7XLG3420 Probable glucuronosyltran no no 0.649 0.740 0.247 1e-16
Q9FZJ1412 Probable beta-1,4-xylosyl no no 0.653 0.759 0.256 1e-16
Q8S1X8415 Probable glucuronosyltran no no 0.649 0.749 0.247 1e-16
Q9SSE8470 Probable glycosyltransfer no no 0.551 0.561 0.274 2e-16
Q33AH8417 Probable glucuronosyltran no no 0.649 0.745 0.242 3e-16
>sp|Q9LFP3|GLYT4_ARATH Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2 Back     alignment and function desciption
 Score = 96.3 bits (238), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 154/313 (49%), Gaps = 41/313 (13%)

Query: 155 GSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWL----EQQE 210
           G+   K   P EA +F++PV   ++++  V  P  +  Y+ + +Q  + +++     +  
Sbjct: 184 GNSRFKAASPEEATVFYIPV-GIVNIIRFVYRPYTS--YARDRLQNIVKDYISLISNRYP 240

Query: 211 YWRRNNGRDHVII----------AGDPNAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKD 260
           YW R+ G DH  +          A DP      +  + NA    S  G   +   SL  +
Sbjct: 241 YWNRSRGADHFFLSCHDWAPDVSAVDPELYKHFIRALCNAN---SSEGFTPMRDVSL-PE 296

Query: 261 VVIPYSHRINTYTGDPRVDNRNTLLFFMGNRYRKEGGKIRDLLF-NILETEEDVVIKHGT 319
           + IP+S     +TG+P   NR  L FF G  +    G +R +LF +  E ++DV++    
Sbjct: 297 INIPHSQLGFVHTGEP-PQNRKLLAFFAGGSH----GDVRKILFQHWKEKDKDVLV---Y 348

Query: 320 QSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYR 379
           ++       T+ M  +KFCL P+G   ++ R+ +++ S CVPVI++D   LPF DV++++
Sbjct: 349 ENLPKTMNYTKMMDKAKFCLCPSGWEVASPRIVESLYSGCVPVIIADYYVLPFSDVLNWK 408

Query: 380 KIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKKVQRYFI-------YDHPNGAVN 432
             +V +  S       +   L A+T +  L  QR + +V+++F+       YD  +  ++
Sbjct: 409 TFSVHIPISKMPD---IKKILEAITEEEYLNMQRRVLEVRKHFVINRPSKPYDMLHMIMH 465

Query: 433 EIW-REVSQKLPL 444
            IW R ++ ++PL
Sbjct: 466 SIWLRRLNVRIPL 478
May be involved in cell wall biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q940Q8|IX10L_ARATH Probable beta-1,4-xylosyltransferase IRX10L OS=Arabidopsis thaliana GN=IRX10L PE=2 SV=1 Back     alignment and function description
>sp|Q8S1X9|GT13_ORYSJ Probable glucuronosyltransferase Os01g0926400 OS=Oryza sativa subsp. japonica GN=Os01g0926400 PE=2 SV=1 Back     alignment and function description
>sp|Q3E9A4|GLYT5_ARATH Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana GN=At5g20260 PE=3 SV=3 Back     alignment and function description
>sp|Q6H4N0|GT21_ORYSJ Probable glucuronosyltransferase Os02g0520750 OS=Oryza sativa subsp. japonica GN=Os02g0520750 PE=2 SV=1 Back     alignment and function description
>sp|Q7XLG3|GT42_ORYSJ Probable glucuronosyltransferase Os04g0398600 OS=Oryza sativa subsp. japonica GN=Os04g0398600 PE=2 SV=2 Back     alignment and function description
>sp|Q9FZJ1|IRX10_ARATH Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1 Back     alignment and function description
>sp|Q8S1X8|GT14_ORYSJ Probable glucuronosyltransferase Os01g0926600 OS=Oryza sativa subsp. japonica GN=Os01g0926600 PE=2 SV=1 Back     alignment and function description
>sp|Q9SSE8|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1 Back     alignment and function description
>sp|Q33AH8|GT101_ORYSJ Probable glucuronosyltransferase GUT1 OS=Oryza sativa subsp. japonica GN=GUT1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query479
255565307452 catalytic, putative [Ricinus communis] g 0.918 0.973 0.702 0.0
224136688457 predicted protein [Populus trichocarpa] 0.918 0.962 0.673 0.0
449487654464 PREDICTED: probable beta-1,4-xylosyltran 0.914 0.943 0.663 0.0
30686300447 Exostosin family protein [Arabidopsis th 0.924 0.991 0.679 0.0
449455387464 PREDICTED: probable beta-1,4-xylosyltran 0.914 0.943 0.660 1e-180
297826983446 hypothetical protein ARALYDRAFT_482474 [ 0.926 0.995 0.668 1e-177
357475227481 Xylogalacturonan beta-1,3-xylosyltransfe 0.933 0.929 0.661 1e-172
356519776452 PREDICTED: probable beta-1,4-xylosyltran 0.914 0.969 0.664 1e-171
224120296382 predicted protein [Populus trichocarpa] 0.789 0.989 0.736 1e-171
356577103459 PREDICTED: probable glucuronosyltransfer 0.918 0.958 0.661 1e-169
>gi|255565307|ref|XP_002523645.1| catalytic, putative [Ricinus communis] gi|223537097|gb|EEF38731.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/457 (70%), Positives = 376/457 (82%), Gaps = 17/457 (3%)

Query: 35  MARKSSLLKQTLIVLALFILAVYAFVNTFFSPPVAA--DADPAFNKLSQQNSNI-----E 87
           MARKSSLLKQTLI     ILA+YA  NTFF+P  ++     P  N LS     +      
Sbjct: 1   MARKSSLLKQTLIFSICLILALYAVFNTFFNPTTSSLLYPSPEDNSLSGFPGKVTENNDN 60

Query: 88  FKSSKVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLS 147
              +KVK++MY+LP+KFT GII+QH++ARG       D S +KYPGHQHMGEWY+FSDL+
Sbjct: 61  NNINKVKIFMYDLPKKFTTGIIQQHALARGS-----KDTSNVKYPGHQHMGEWYLFSDLN 115

Query: 148 RPESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAA-----HRYSDEEMQEEL 202
           RPE  R+GSPVVKV DP EADLF+VPVFSSLSL+VN   PA         YSDEEMQE+L
Sbjct: 116 RPEHGRIGSPVVKVDDPDEADLFYVPVFSSLSLIVNPVRPAGTEPGLVQHYSDEEMQEQL 175

Query: 203 VEWLEQQEYWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKDVV 262
           VEWLEQQEYW+RNNGRDHVIIAGDPNA+ RV+DR+KNA+LL+SDFGR+R DQGSLVKD++
Sbjct: 176 VEWLEQQEYWKRNNGRDHVIIAGDPNALYRVLDRVKNAILLLSDFGRVRPDQGSLVKDII 235

Query: 263 IPYSHRINTYTGDPRVDNRNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQSR 322
           +PYSHRIN Y GD  V +RNTLLFFMGNRYRK+GGKIRDLLF +LE+EEDVVIKHGTQSR
Sbjct: 236 VPYSHRINVYNGDIGVRDRNTLLFFMGNRYRKDGGKIRDLLFQMLESEEDVVIKHGTQSR 295

Query: 323 ESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIA 382
           E+RRAA++GMHTSKFCLNPAGDTPSACRLFD+IVSLCVPVIVSDSIELPFEDVIDY KIA
Sbjct: 296 ENRRAASRGMHTSKFCLNPAGDTPSACRLFDSIVSLCVPVIVSDSIELPFEDVIDYTKIA 355

Query: 383 VFVETSAATKPGFLISTLRAVTPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQKL 442
           +FVET+ + KPG+L+  LR VT +RILEYQ+ELKKV RYF YD+ NG VNEIWR+V+QKL
Sbjct: 356 IFVETTDSLKPGYLVKLLREVTSERILEYQKELKKVTRYFEYDNSNGTVNEIWRQVAQKL 415

Query: 443 PLIKIMINRDKRLVRRESSEPVCSSLCTNQSGLITSL 479
           PLI++M NRD+RLV+R+ S+P CS LCTNQ+GLI SL
Sbjct: 416 PLIRLMTNRDRRLVKRDWSQPDCSCLCTNQTGLIISL 452

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224136688|ref|XP_002322391.1| predicted protein [Populus trichocarpa] gi|222869387|gb|EEF06518.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449487654|ref|XP_004157734.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX10L-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|30686300|ref|NP_850241.1| Exostosin family protein [Arabidopsis thaliana] gi|50253448|gb|AAT71926.1| At2g35100 [Arabidopsis thaliana] gi|53828615|gb|AAU94417.1| At2g35100 [Arabidopsis thaliana] gi|110737872|dbj|BAF00874.1| hypothetical protein [Arabidopsis thaliana] gi|330253970|gb|AEC09064.1| Exostosin family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449455387|ref|XP_004145434.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX10L-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297826983|ref|XP_002881374.1| hypothetical protein ARALYDRAFT_482474 [Arabidopsis lyrata subsp. lyrata] gi|297327213|gb|EFH57633.1| hypothetical protein ARALYDRAFT_482474 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357475227|ref|XP_003607899.1| Xylogalacturonan beta-1,3-xylosyltransferase [Medicago truncatula] gi|355508954|gb|AES90096.1| Xylogalacturonan beta-1,3-xylosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356519776|ref|XP_003528545.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX10L-like [Glycine max] Back     alignment and taxonomy information
>gi|224120296|ref|XP_002318294.1| predicted protein [Populus trichocarpa] gi|222858967|gb|EEE96514.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356577103|ref|XP_003556667.1| PREDICTED: probable glucuronosyltransferase Os02g0520750-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query479
TAIR|locus:2063494447 ARAD1 "AT2G35100" [Arabidopsis 0.924 0.991 0.623 8.8e-150
TAIR|locus:2155302443 ARAD2 "AT5G44930" [Arabidopsis 0.893 0.966 0.595 5.8e-137
TAIR|locus:2026103477 AT1G34270 "AT1G34270" [Arabido 0.492 0.494 0.423 6.8e-65
TAIR|locus:2197639430 AT1G67410 "AT1G67410" [Arabido 0.509 0.567 0.431 3.7e-62
TAIR|locus:2078327475 AT3G45400 "AT3G45400" [Arabido 0.893 0.901 0.348 2.4e-60
TAIR|locus:2019200461 AT1G74680 "AT1G74680" [Arabido 0.762 0.791 0.370 5.9e-57
TAIR|locus:2096439499 EDA5 "AT3G03650" [Arabidopsis 0.759 0.729 0.357 5.9e-57
TAIR|locus:2148136511 AT5G16890 "AT5G16890" [Arabido 0.534 0.500 0.406 3.7e-54
TAIR|locus:2120933425 AT4G38040 "AT4G38040" [Arabido 0.430 0.484 0.281 7e-14
TAIR|locus:2100814470 AT3G42180 "AT3G42180" [Arabido 0.427 0.436 0.288 2e-13
TAIR|locus:2063494 ARAD1 "AT2G35100" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1462 (519.7 bits), Expect = 8.8e-150, P = 8.8e-150
 Identities = 280/449 (62%), Positives = 347/449 (77%)

Query:    35 MARKSSLLKQTLIVLALFILAVYAFVNTFFSPPVAADADPAFNKLSQQNSNIEFKSS--- 91
             MARKSSLLK+  I + + ++A+Y  +N   S  + + +D    +L +++ + E ++    
Sbjct:     1 MARKSSLLKRAAIAV-VSVIAIYVILNASVSRSLPSSSDLP-RQLIREDDDDEGRAPIQP 58

Query:    92 KVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLSRPES 151
             +V+VYMYNLP++FTYG+IEQHS+ARGG+  PV DV+ LKYPGHQHM EWY+FSDL++PE 
Sbjct:    59 RVRVYMYNLPKRFTYGLIEQHSIARGGIKKPVGDVTTLKYPGHQHMHEWYLFSDLNQPEV 118

Query:   152 ERVGSPVVKVTDPGEADXXXXXXXXXXXXXXXXGGPA-AAHRYSDXXXXXXXXXXXXXXX 210
             +R GSP+V+V+DP +AD                G P  A   YSD               
Sbjct:   119 DRSGSPIVRVSDPADADLFYVPVFSSLSLIVNAGRPVEAGSGYSDEKMQEGLVEWLEGQE 178

Query:   211 YWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKDVVIPYSHRIN 270
             +WRRN GRDHVI AGDPNA+ R++DR+KNAVLLVSDFGRLR DQGS VKDVVIPYSHR+N
Sbjct:   179 WWRRNAGRDHVIPAGDPNALYRILDRVKNAVLLVSDFGRLRPDQGSFVKDVVIPYSHRVN 238

Query:   271 TYTGDPRVDNRNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQSRESRRAATQ 330
              + G+  V++RNTLLFFMGNRYRK+GGK+RDLLF +LE E+DV IKHGTQSRE+RRAAT+
Sbjct:   239 LFNGEIGVEDRNTLLFFMGNRYRKDGGKVRDLLFQVLEKEDDVTIKHGTQSRENRRAATK 298

Query:   331 GMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAA 390
             GMHTSKFCLNPAGDTPSACRLFD+IVSLCVP+IVSDSIELPFEDVIDYRK ++FVE +AA
Sbjct:   299 GMHTSKFCLNPAGDTPSACRLFDSIVSLCVPLIVSDSIELPFEDVIDYRKFSIFVEANAA 358

Query:   391 TKPGFLISTLRAVTPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQKLPLIKIMIN 450
              +PGFL+  LR +   +ILEYQRE+K V+RYF YD+PNGAV EIWR+VS KLPLIK+M N
Sbjct:   359 LQPGFLVQMLRKIKTKKILEYQREMKSVRRYFDYDNPNGAVKEIWRQVSHKLPLIKLMSN 418

Query:   451 RDKRLVRRESSEPVCSSLCTNQSGLITSL 479
             RD+RLV R  +EP CS LCTNQ+GLITS+
Sbjct:   419 RDRRLVLRNLTEPNCSCLCTNQTGLITSI 447
GO:0003824 "catalytic activity" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0016020 "membrane" evidence=IEA;ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0045489 "pectin biosynthetic process" evidence=IMP
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2155302 ARAD2 "AT5G44930" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026103 AT1G34270 "AT1G34270" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197639 AT1G67410 "AT1G67410" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078327 AT3G45400 "AT3G45400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019200 AT1G74680 "AT1G74680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096439 EDA5 "AT3G03650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148136 AT5G16890 "AT5G16890" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120933 AT4G38040 "AT4G38040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100814 AT3G42180 "AT3G42180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ARAD1
ARAD1 (ARABINAN DEFICIENT 1); catalytic/ transferase, transferring glycosyl groups; Putative glycosyltransferase, similar to other CAZy Family 47 proteins. The protein is predicted to be a type 2 membrane protein with a signal anchor and is predicted to be targeted to the secretory pathway and to have a single transmembrane helix near the N terminus; hence, the protein has the features expected for a type II membrane protein targeted to the Golgi vesicles. The gene was shown to be expressed in all tissues but particularly in vascular tissues of leaves and stems. (447 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
RGXT2
RGXT2 (rhamnogalacturonan xylosyltransferase 2); UDP-xylosyltransferase; Encodes a protein with [...] (367 aa)
      • 0.827
RGXT1
RGXT1 (rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase; Encodes a protein with [...] (361 aa)
      • 0.790
AT2G35610
unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (644 aa)
      • 0.790
IRX14
IRX14 (irregular xylem 14); transferase, transferring glycosyl groups / xylosyltransferase; The [...] (525 aa)
      • 0.786
GAUT1
GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ trans [...] (673 aa)
      • 0.786
UGT78D3
UGT78D3 (UDP-GLUCOSYL TRANSFERASE 78D3); UDP-glycosyltransferase/ flavonol 3-O-arabinosyltransf [...] (459 aa)
      • 0.784
XYL4
XYL4; hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase; Encodes a beta-d [...] (784 aa)
      • 0.784
QUA1
QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferr [...] (559 aa)
      • 0.784
UGT76E2
UGT76E2 (UDP-GLUCOSYL TRANSFERASE 76E2); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransfe [...] (449 aa)
      • 0.750
MUR4
MUR4 (MURUS 4); UDP-arabinose 4-epimerase/ catalytic; encodes a type-II membrane protein that c [...] (419 aa)
      • 0.748

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query479
pfam03016292 pfam03016, Exostosin, Exostosin family 4e-78
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information 
 Score =  245 bits (627), Expect = 4e-78
 Identities = 107/326 (32%), Positives = 145/326 (44%), Gaps = 45/326 (13%)

Query: 89  KSSKVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLSR 148
               +KVY+Y+LPR+F   ++E                    Y  HQ+  E  +   +  
Sbjct: 1   SCKGLKVYVYDLPRRFN--LLEDVLPETS------------WYLTHQYAAESILHKSILN 46

Query: 149 PESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWLEQ 208
                      +  DP EADLFFVP ++SLS+  N            + +  ELVEWLE 
Sbjct: 47  SR--------CRTLDPDEADLFFVPFYTSLSVGTN--------AVERDLLPSELVEWLES 90

Query: 209 QEYWRRNNGRDHVIIAGDP---NAMLRVMDRIKNAVLLVSDFGRLRVDQGSLVKDVVIPY 265
             YW R+ GRDH+I+   P   +A  R+     N +L V   G    DQ     DV +P 
Sbjct: 91  LPYWNRSGGRDHIIVNSHPFGGSAFDRLPALNNNTILAVLAGGGFSEDQFRPGFDVPLPA 150

Query: 266 SHRINTYTGD----PRVDNRNTLLFFMGNRYRK----EGGKIRDLLFNILETEEDVVIKH 317
               N+             R TLLFF G             IRDLL    +   D     
Sbjct: 151 YFHPNSVDDLESDGMPPSKRKTLLFFAGGPRPAGKGALANAIRDLLIEECKNSPDFQC-E 209

Query: 318 GTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVID 377
           G QS  +     + + +S+FCL P GDTP++ RLFDA+ + C+PVI+SD  ELPFEDVID
Sbjct: 210 GNQSCGNPENYMELLRSSRFCLVPPGDTPTSPRLFDALRAGCIPVIISDGWELPFEDVID 269

Query: 378 YRKIAVFVETSAATKPGFLISTLRAV 403
           + K +V V          L   LRA+
Sbjct: 270 WSKFSVRV---PENDIPSLPEILRAI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 479
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 99.93
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.68
cd03820348 GT1_amsD_like This family is most closely related 96.02
cd03801374 GT1_YqgM_like This family is most closely related 95.87
cd03814364 GT1_like_2 This family is most closely related to 95.65
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 95.47
cd03822366 GT1_ecORF704_like This family is most closely rela 94.97
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 94.76
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 94.74
cd03818396 GT1_ExpC_like This family is most closely related 94.58
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 94.44
cd03794394 GT1_wbuB_like This family is most closely related 94.39
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 94.29
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 94.11
cd03819355 GT1_WavL_like This family is most closely related 93.96
cd03823359 GT1_ExpE7_like This family is most closely related 93.76
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 93.65
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 93.65
cd04962371 GT1_like_5 This family is most closely related to 93.62
cd03811353 GT1_WabH_like This family is most closely related 93.6
cd03806419 GT1_ALG11_like This family is most closely related 93.49
cd03825365 GT1_wcfI_like This family is most closely related 93.41
cd03798377 GT1_wlbH_like This family is most closely related 93.28
cd03821375 GT1_Bme6_like This family is most closely related 93.26
cd03808359 GT1_cap1E_like This family is most closely related 92.96
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 92.86
cd03800398 GT1_Sucrose_synthase This family is most closely r 92.66
PHA01630331 putative group 1 glycosyl transferase 92.64
cd03807365 GT1_WbnK_like This family is most closely related 92.59
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 92.37
PRK10307412 putative glycosyl transferase; Provisional 92.36
cd03809365 GT1_mtfB_like This family is most closely related 92.17
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 91.84
cd03817374 GT1_UGDG_like This family is most closely related 91.72
PLN02949463 transferase, transferring glycosyl groups 91.46
cd04949372 GT1_gtfA_like This family is most closely related 90.93
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 90.52
cd03795357 GT1_like_4 This family is most closely related to 90.11
cd04955363 GT1_like_6 This family is most closely related to 89.7
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 89.68
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 89.64
PRK14098489 glycogen synthase; Provisional 88.99
PRK00654466 glgA glycogen synthase; Provisional 88.94
PRK14099485 glycogen synthase; Provisional 88.23
cd03805392 GT1_ALG2_like This family is most closely related 87.54
cd04951360 GT1_WbdM_like This family is most closely related 87.37
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 87.29
cd03816415 GT1_ALG1_like This family is most closely related 86.26
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 85.93
cd03804351 GT1_wbaZ_like This family is most closely related 85.21
cd03802335 GT1_AviGT4_like This family is most closely relate 83.12
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 83.07
TIGR02918500 accessory Sec system glycosylation protein GtfA. M 82.23
cd03796398 GT1_PIG-A_like This family is most closely related 82.11
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information 
Probab=100.00  E-value=3.6e-57  Score=481.52  Aligned_cols=347  Identities=30%  Similarity=0.468  Sum_probs=274.4

Q ss_pred             CCCceEEEecCCcccchhHHhhccccc---------------CCCCCccccc--------CCCCCCCCccchhHHHHhhc
Q 011685           90 SSKVKVYMYNLPRKFTYGIIEQHSMAR---------------GGLVGPVADV--------SMLKYPGHQHMGEWYVFSDL  146 (479)
Q Consensus        90 ~~~~~IYVYdLP~~Fn~~ll~~c~~~~---------------~g~g~~~~~~--------~~~~~~~~q~s~e~~~~~~l  146 (479)
                      +.+.+||||++|+.|+.++++.|....               .+.|......        ...|+.++|++.|.+++..+
T Consensus        70 ~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~  149 (464)
T KOG1021|consen   70 CAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRM  149 (464)
T ss_pred             ccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHH
Confidence            778999999999999999999885431               1122211110        12345568888888877665


Q ss_pred             cCccccccCCCceecCCCCCCcEEEEecccccceeeccCCCCC-CCCCChHHHHHHHHHHHhhCccccccCCCceEEEcC
Q 011685          147 SRPESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAA-AHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAG  225 (479)
Q Consensus       147 ~~~~~~rl~s~~~rT~DPeeAdlFyVP~y~~l~~~~~~~~~~~-~~~~s~~~~~~~l~~~L~~~PyW~R~gGrDHf~v~g  225 (479)
                      +      ...++|||.||+|||+||||||++++++.....+.. .....++.++.+++.|++++|||+|++|+|||||++
T Consensus       150 ~------~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~  223 (464)
T KOG1021|consen  150 L------RRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVAC  223 (464)
T ss_pred             h------cccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeC
Confidence            3      134569999999999999999999987544333311 111246778899999999999999999999999999


Q ss_pred             CcchhhhhhHhhhceEEEeeccCC--ccccCCCcC-ceeecCCcccC-----C--CCCCCCCCCCCceEEEeecccccCC
Q 011685          226 DPNAMLRVMDRIKNAVLLVSDFGR--LRVDQGSLV-KDVVIPYSHRI-----N--TYTGDPRVDNRNTLLFFMGNRYRKE  295 (479)
Q Consensus       226 ~~~~~~~~~~~~~nai~l~~~~g~--~~~~~~~~~-kDvvIPy~~~~-----~--~~~~~~~~~~R~~L~~F~G~~~~~~  295 (479)
                      |+++.+......++++.++.+++.  .....+.+. +|++|||++..     .  .|++.++..+|++|++|+|+.   .
T Consensus       224 ~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~---~  300 (464)
T KOG1021|consen  224 HDWGDFRRRSDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAP---A  300 (464)
T ss_pred             CcchheeeccchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccc---c
Confidence            988776654445555555555552  111223344 99999997421     1  477778889999999999985   5


Q ss_pred             CchhHHHHHHHHcC----CCcEEEecCccCcccHhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCC
Q 011685          296 GGKIRDLLFNILET----EEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELP  371 (479)
Q Consensus       296 ~~~iR~~L~~~~~~----~~d~~i~~g~~~~~~~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lP  371 (479)
                      ++.||+.|+++|++    +.+..+..|...|.+...|++.|++|+|||||+||+++++|+||||++|||||||+|++++|
T Consensus       301 ~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lp  380 (464)
T KOG1021|consen  301 GGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLP  380 (464)
T ss_pred             CCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccC
Confidence            78999999999988    33334455666677889999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcEEEEEeCCCcCCcccHHHHHccCCHHHHHHHHHHHHh-HhhcceecC--C---CchHHHHHHHHHhhcccc
Q 011685          372 FEDVIDYRKIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKK-VQRYFIYDH--P---NGAVNEIWREVSQKLPLI  445 (479)
Q Consensus       372 F~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is~e~i~~Mr~~l~~-v~~~f~Y~~--p---~~a~~~il~~l~~rlp~i  445 (479)
                      |++++||++|||+|+++++.+.  |.++|.+|+.+++.+||+++++ +.++|.+..  +   +|||++++.++..|+...
T Consensus       381 f~~~~d~~~fSV~v~~~~v~~~--~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~  458 (464)
T KOG1021|consen  381 FGDVLDWTEFSVFVPEKDVPEL--IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKL  458 (464)
T ss_pred             cCCCccceEEEEEEEHHHhhhH--HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhccccc
Confidence            9999999999999998887762  5999999999999999999995 799999986  3   689999999999998766


Q ss_pred             hh
Q 011685          446 KI  447 (479)
Q Consensus       446 ~~  447 (479)
                      +.
T Consensus       459 ~~  460 (464)
T KOG1021|consen  459 RS  460 (464)
T ss_pred             cc
Confidence            54

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query479
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 53.3 bits (127), Expect = 1e-07
 Identities = 68/488 (13%), Positives = 141/488 (28%), Gaps = 144/488 (29%)

Query: 15  PPLPSIPNSQSHKTLTPISLMARKSSLLKQTLIVLALFILA-VYAFVNTFFSPPVAADAD 73
           P   S  +  S+  L   S+ A    LLK       L +L  V        +        
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ-------NAKAWN--- 260

Query: 74  PAFN---KL---SQQNSNIEFKSSKV--KVYMYNLPRKFTYGIIEQHSMARGGLVGPVAD 125
            AFN   K+   ++     +F S+     + + +     T             L+    D
Sbjct: 261 -AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT----PDEVK---SLLLKYLD 312

Query: 126 VSMLKYPGHQHMGEWYVFSDLSRPESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVG 185
                              DL  P      +P                    LS++    
Sbjct: 313 CR---------------PQDL--PREVLTTNPRR------------------LSIIA--- 334

Query: 186 GPAAAHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAGDPNAMLRVMDRIKNAVLLVS 245
                     E +++ L  W    + W+  N           + +  +++   N VL  +
Sbjct: 335 ----------ESIRDGLATW----DNWKHVNC----------DKLTTIIESSLN-VLEPA 369

Query: 246 DFGRLRVDQGSLVKDVVIPYSHRINTY-----TGDPRVD----NRNTLLFFMGNRYRKEG 296
           ++ ++            IP +  ++         D  V     ++ +L+     +  KE 
Sbjct: 370 EYRKMFDRLSVFPPSAHIP-TILLSLIWFDVIKSDVMVVVNKLHKYSLV----EKQPKES 424

Query: 297 G-KIRDLLFNILETEEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAI 355
              I  +   +    E+    H       R           F  +           +  I
Sbjct: 425 TISIPSIYLELKVKLENEYALH-------RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477

Query: 356 VSLCVPVIVSDSIELPFEDV-IDYRKIAVFVE------TSAATKPGFLISTLRAVTPDRI 408
                 +   + + L F  V +D+R    F+E      ++A    G +++TL        
Sbjct: 478 GHHLKNIEHPERMTL-FRMVFLDFR----FLEQKIRHDSTAWNASGSILNTL-------- 524

Query: 409 LEYQRELKKVQRYFIYDHPNGAVNEIWREVSQKLPLIKIMINRDKRLVRRESSEPVCSSL 468
               ++LK  + Y   + P     E  R V+    ++  +   ++ L+  + ++ +  +L
Sbjct: 525 ----QQLKFYKPYICDNDP---KYE--RLVNA---ILDFLPKIEENLICSKYTDLLRIAL 572

Query: 469 CTNQSGLI 476
                 + 
Sbjct: 573 MAEDEAIF 580
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query479
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 97.23
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 96.05
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 96.02
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 95.78
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 94.62
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 94.29
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 94.23
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 93.3
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 92.34
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 91.93
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 91.6
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 91.56
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 90.65
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 90.15
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 89.82
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 89.82
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 87.71
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 86.01
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 85.69
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
Probab=97.23  E-value=0.0015  Score=57.29  Aligned_cols=129  Identities=14%  Similarity=0.119  Sum_probs=76.8

Q ss_pred             ceEEEeecccccCCCchhHHHHHHHHcCCCcEEEecCccCcccHhHHhhccCCCcEEEecCCCCCCcchHHHHHHhccee
Q 011685          282 NTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVP  361 (479)
Q Consensus       282 ~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~d~~i~~g~~~~~~~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIP  361 (479)
                      ++-+.+.|.-      ..++.+.+..++.+. .+..|...   ..+..+.++.+.+++.|.-.......++|||.+||||
T Consensus        32 ~~~l~i~G~g------~~~~~~~~~~~~~~~-~v~~g~~~---~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vP  101 (166)
T 3qhp_A           32 DIVLLLKGKG------PDEKKIKLLAQKLGV-KAEFGFVN---SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVP  101 (166)
T ss_dssp             GEEEEEECCS------TTHHHHHHHHHHHTC-EEECCCCC---HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCE
T ss_pred             CeEEEEEeCC------ccHHHHHHHHHHcCC-eEEEeecC---HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCc
Confidence            5667778852      234444444332222 22224332   4577889999999999875555567899999999999


Q ss_pred             EEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--CHHHHHHHHHHHHhHhhcceecC
Q 011685          362 VIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV--TPDRILEYQRELKKVQRYFIYDH  426 (479)
Q Consensus       362 VIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--s~e~i~~Mr~~l~~v~~~f~Y~~  426 (479)
                      ||..+..- ...++++-...  .++..+..+   +.+.|..+  .++...+|.++.+...+.|.|..
T Consensus       102 vi~~~~~~-~~~~~~~~~~~--~~~~~~~~~---l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~  162 (166)
T 3qhp_A          102 VIANSPLS-ATRQFALDERS--LFEPNNAKD---LSAKIDWWLENKLERERMQNEYAKSALNYTLEN  162 (166)
T ss_dssp             EEECCTTC-GGGGGCSSGGG--EECTTCHHH---HHHHHHHHHHCHHHHHHHHHHHHHHHHHHC---
T ss_pred             EEeeCCCC-chhhhccCCce--EEcCCCHHH---HHHHHHHHHhCHHHHHHHHHHHHHHHHHCChhh
Confidence            99944321 11222333333  444444322   33333332  67888999999888778888753
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query479
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 95.61
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 94.64
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 92.69
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 89.41
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 86.94
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=95.61  E-value=0.0073  Score=59.06  Aligned_cols=122  Identities=13%  Similarity=0.164  Sum_probs=74.4

Q ss_pred             CCCCceEEEeecccccCCCchhHHHHHHHHcCCCcEEEecCccC---cccHhHHhhccCCCcEEEecCC---CCCCcchH
Q 011685          278 VDNRNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQS---RESRRAATQGMHTSKFCLNPAG---DTPSACRL  351 (479)
Q Consensus       278 ~~~R~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~d~~i~~g~~~---~~~~~~y~~~l~~S~FCL~P~G---ds~ts~Rl  351 (479)
                      ..+|+.+.+|.-+-   .++..|..+++.+.+-..+.. .|.+.   +.....-.+.+++.+|+||..-   .+..+-.+
T Consensus       176 ~~~K~kFcs~v~Sn---~~~~~R~~~~~~L~k~~~Vd~-~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi  251 (349)
T d2nzwa1         176 DPLKRGFASFVASN---PNAPIRNAFYDALNSIEPVTG-GGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKI  251 (349)
T ss_dssp             CTTSSEEEEECCSC---CCCHHHHHHHHHHTTTSCCEE-CSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHH
T ss_pred             ccccCceEEEEEcC---CCCchHHHHHHHHhccCeecc-cCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHH
Confidence            35566666655332   245789999999987665543 33321   1112234678899999999753   35668899


Q ss_pred             HHHHHhcceeEEeeCC-c--cCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccCC--HHHHHHHH
Q 011685          352 FDAIVSLCVPVIVSDS-I--ELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVT--PDRILEYQ  412 (479)
Q Consensus       352 ~DAi~aGCIPVIisd~-~--~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is--~e~i~~Mr  412 (479)
                      +||+.+|||||..++. +  .+|=...|+.         .|......+.+.|..|+  ++.+.+|-
T Consensus       252 ~da~~~g~iPIy~G~~~i~~~f~~~sfI~~---------~df~s~~el~~~i~~l~~n~~~Y~~~~  308 (349)
T d2nzwa1         252 IDAYFSHTIPIYWGSPSVAKDFNPKSFVNV---------HDFKNFDEAIDYIKYLHTHKNAYLDML  308 (349)
T ss_dssp             HHHHHTTCEEEEESCTTGGGTSCGGGSEEG---------GGSSSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             HHHHhCCeEEEEECCCcHHHcCCCccEEEh---------hhCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence            9999999999999874 3  2332222322         33222123666666664  45555554
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure