Citrus Sinensis ID: 011690
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 479 | 2.2.26 [Sep-21-2011] | |||||||
| Q9BT22 | 464 | Chitobiosyldiphosphodolic | yes | no | 0.899 | 0.928 | 0.418 | 2e-89 | |
| Q921Q3 | 482 | Chitobiosyldiphosphodolic | yes | no | 0.906 | 0.900 | 0.416 | 3e-89 | |
| Q5R7A2 | 464 | Chitobiosyldiphosphodolic | yes | no | 0.906 | 0.935 | 0.414 | 1e-88 | |
| P90522 | 493 | Chitobiosyldiphosphodolic | yes | no | 0.841 | 0.817 | 0.394 | 5e-79 | |
| O13933 | 424 | Chitobiosyldiphosphodolic | yes | no | 0.816 | 0.922 | 0.372 | 6e-70 | |
| Q6C3K2 | 463 | Chitobiosyldiphosphodolic | yes | no | 0.835 | 0.863 | 0.362 | 4e-66 | |
| Q59Q79 | 456 | Chitobiosyldiphosphodolic | N/A | no | 0.812 | 0.853 | 0.322 | 1e-57 | |
| P16661 | 449 | Chitobiosyldiphosphodolic | yes | no | 0.843 | 0.899 | 0.334 | 3e-57 | |
| Q6CVU2 | 447 | Chitobiosyldiphosphodolic | yes | no | 0.818 | 0.876 | 0.328 | 2e-56 | |
| Q6FLZ2 | 450 | Chitobiosyldiphosphodolic | yes | no | 0.828 | 0.882 | 0.329 | 9e-55 |
| >sp|Q9BT22|ALG1_HUMAN Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Homo sapiens GN=ALG1 PE=1 SV=2 | Back alignment and function desciption |
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Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 200/478 (41%), Positives = 273/478 (57%), Gaps = 47/478 (9%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGRA VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRAARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G P+V + +K ++Q LLW L + +FL QNPP +P++
Sbjct: 86 VGLTELQSLAVG-PRVFQ---YGVKVVLQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178
+ L S ++DWHN+GY+++ L G V + + + EK++G++++ LCV
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWY-----EKFFGRLSHLNLCV 195
Query: 179 TQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG 238
T AM+ +LA NW I+A +YD+P FF T L+ +H LF +L +H P + +
Sbjct: 196 TNAMREDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGS-MHSPFRAR-----SE 249
Query: 239 MEGQKADETIFT---SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 295
E + + FT + +G+ L+ RPAL+VSSTSWT DEDF ILL A
Sbjct: 250 PEDPVTERSAFTERDAGSGLVTRLR-ERPALLVSSTSWTEDEDFSILLAAL--------- 299
Query: 296 ILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW 355
E F + DG P L+ +ITGKGP +E Y I + + + T W
Sbjct: 300 ----------EKFEQLTLDGHNL--PSLVCVITGKGPLREYYSRLIHQKHFQHIQVCTPW 347
Query: 356 LSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 415
L AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC LPVCAV++ C+ ELVK ++NG
Sbjct: 348 LEAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCCLPVCAVNFKCLHELVKHEENG 407
Query: 416 LLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 473
L+F S ELA QL MLF FPD + L + R L RW W + PL+ +
Sbjct: 408 LVFEDSEELAAQLQMLFSNFPDPAGKLNQFRK-NLRESQQLRWDESWVQTVLPLVMDT 464
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Homo sapiens (taxid: 9606) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4EC: 2 |
| >sp|Q921Q3|ALG1_MOUSE Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Mus musculus GN=Alg1 PE=2 SV=3 | Back alignment and function description |
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Score = 329 bits (843), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 196/471 (41%), Positives = 270/471 (57%), Gaps = 37/471 (7%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L++ I I +
Sbjct: 30 GRARHMVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQNDRIRIVKL 88
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T + G P++L+ +K + Q LLW + + +FL QNPP +P + +
Sbjct: 89 TDLRGLGAG-PRILQ---YGVKVVFQAVYLLWKMMRMDPAAYIFL-QNPPGLPAIAVCWF 143
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQA 181
+ S ++DWHN+GY+++ L G R V + + + EK++G++++ LCVT A
Sbjct: 144 VGCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWY-----EKFFGRLSHLNLCVTNA 198
Query: 182 MQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEG 241
M+ +LA+NW ++A LYD+P FF T L+ +HELF +L+ H Q C + +
Sbjct: 199 MREDLAENWCVRAVTLYDKPASFFKETPLDLQHELFMKLS---HTYSPFQSCSDPSHPDT 255
Query: 242 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 301
+++ T +G+ L RPAL+VSSTSWT DEDF ILL A ++++ L D
Sbjct: 256 ERSAFTERDCQSGVVRRLH-GRPALLVSSTSWTEDEDFSILLRALEKFEQQA---LTGDS 311
Query: 302 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 361
P L+ +ITGKGP +E Y I + L+ V F T WL AEDY
Sbjct: 312 ------------------LPSLVCVITGKGPLREHYRHLISQKHLQHVRFCTPWLEAEDY 353
Query: 362 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSS 421
PLLLGSADLGVCLH SSSGLDLPMKVVDMFGC LPVCAV++ C+ ELV+ +NGL+F +
Sbjct: 354 PLLLGSADLGVCLHMSSSGLDLPMKVVDMFGCHLPVCAVNFKCLHELVRHGENGLVFKDA 413
Query: 422 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE 472
ELA QL MLF FPD + L + R E G RW W+ PL+
Sbjct: 414 EELAAQLQMLFSKFPDPAGKLSQFRKKLQESG-QQRWDESWQHTVLPLLAH 463
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q5R7A2|ALG1_PONAB Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Pongo abelii GN=ALG1 PE=2 SV=1 | Back alignment and function description |
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Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 197/475 (41%), Positives = 267/475 (56%), Gaps = 41/475 (8%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGR VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRTARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G P+V + +K + Q LLW L + +FL QNPP +P++
Sbjct: 86 VGLTELQSLAVG-PRVFQ---YGVKVVFQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178
+ L S ++DWHN+GY+++ L G V + + + E+++G++++ LCV
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWY-----ERFFGRLSHLNLCV 195
Query: 179 TQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG 238
T AM+ +LA+NW I+A +YD+P FF T L+ +H LF +L H P + +
Sbjct: 196 TNAMREDLAENWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGGT-HSPFRARSEPEDPA 254
Query: 239 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILN 298
E E + +G+ L RPAL+VSSTSWT DEDF ILL A
Sbjct: 255 TERSAFTER--DAGSGLVTRLH-ERPALLVSSTSWTEDEDFSILLAAL------------ 299
Query: 299 EDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSA 358
E F + DG P L+ +ITGKGP +E Y I + + + T WL A
Sbjct: 300 -------EKFEQLTLDGHSL--PSLVCVITGKGPLREYYSHLIHQKHFQHIQVCTPWLEA 350
Query: 359 EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 418
EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC LPVCAV++ C+ ELVK ++NGL+F
Sbjct: 351 EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCHLPVCAVNFKCLHELVKHEENGLVF 410
Query: 419 SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 473
S ELA QL MLF FPD + L + R L RW W + PL+ +
Sbjct: 411 EDSEELAAQLQMLFSNFPDPAGKLNQFRK-NLRESQQLRWDESWVQTVLPLVMDT 464
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|P90522|ALG1_DICDI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Dictyostelium discoideum GN=alg1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 295 bits (755), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 173/439 (39%), Positives = 249/439 (56%), Gaps = 36/439 (8%)
Query: 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW 64
R VVVLGD+GRSPRMQY ++SL++ + +V ++ Y S+PH I+ + SI I + +
Sbjct: 2 NRVAVVVLGDIGRSPRMQYHSMSLSKLENTKVTLIGYRESEPHPQIVNNDSITIEPLKPF 61
Query: 65 P-TIPRGLPKV------LKPVLLLLKPLIQFFMLLWFLCVKIASP-DVFLVQNPPSVPTL 116
P ++ K+ + P+L + K L Q L++ L VK+ SP + LVQ+PP++PT+
Sbjct: 62 PISMSNSFKKIPLISIFMWPLLAICKVLFQIIQLMYVLLVKVPSPLNTILVQSPPAIPTI 121
Query: 117 VAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCL 176
++ +R ++DWHN GYTLL LSL + + I R IE+Y+ K A L
Sbjct: 122 FVMQIVCWIRGVHLVIDWHNLGYTLLKLSLSKSDNH-PIIRLAKF--IERYFAKNAYAHL 178
Query: 177 CVTQAMQHELAQNWGIKAT--VLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 234
VT M+ +L ++W +K V +D+ F + E+ E ++ +
Sbjct: 179 FVTNEMKIQLVRDWNLKGKTFVFHDKASPIFKSLTDREQEEF-------------LKTFI 225
Query: 235 SNAGMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRV 293
+ ++G+ D+ S+ P + ++++SSTSWT DEDF ILL+A + YD +
Sbjct: 226 NKYSIKGE--DKVYIESVISKKSIRNPKQQTSIIISSTSWTQDEDFSILLDAIVKYD--I 281
Query: 294 AAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRT 353
+N +++ EE D L LLFIITGKGP KE Y+EKI L LK+ T
Sbjct: 282 EHAINNNNNKVEEA-----QDESVVLAENLLFIITGKGPQKEYYQEKINSLSLKKSRIIT 336
Query: 354 MWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 413
+WL +EDYP LL DLGV LH SSSG+DLPMKVVDMFGC LPV A+ + CI ELVKV+
Sbjct: 337 VWLDSEDYPKLLACCDLGVSLHNSSSGIDLPMKVVDMFGCCLPVLAIDFKCIGELVKVNY 396
Query: 414 NGLLFSSSSELADQLLMLF 432
NG LF S +L L LF
Sbjct: 397 NGFLFKDSDQLHQLLNQLF 415
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|O13933|ALG1_SCHPO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 265 bits (677), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 247/473 (52%), Gaps = 82/473 (17%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILE-HPSIHIHTMT 62
+ R V+VLGD+ RSPRMQY A+S A+ + +VD++ Y + E H +I + +
Sbjct: 24 KKRIIVLVLGDIARSPRMQYHAVSFAK-LGWKVDLLGYQHPGSSVGLFESHENIRFYPI- 81
Query: 63 QWPTIPRGL-PKVLKPVLLL--LKPLIQFFMLLWFLCVKIASPDVFL-VQNPPSVPTLVA 118
P++P L PK L L LK L QF L W L V+ P FL +QNPP +P
Sbjct: 82 --PSLPAYLQPKNRLQFLFLGPLKVLHQFLALNWALFVR--KPASFLFIQNPPCIPVFFI 137
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178
+ LR + FI+DWHNFGY++L+L LG++ FV + + + EKY + A L V
Sbjct: 138 AQCLHILRGTKFIIDWHNFGYSILALKLGKQHTFVKLLKIY-----EKYMARGAYAHLTV 192
Query: 179 TQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA 237
++ M+ ++ Q WG+ V YD+PP F P E+K ++
Sbjct: 193 SKRMK-DVLQTWGMNPCYVCYDRPPNHFTPIKNEQKKQM--------------------- 230
Query: 238 GMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAIL 297
S+ I P+ L+++STSWTPDED IL EA L
Sbjct: 231 -------------SIKKIPCEYNPSSTKLLITSTSWTPDEDIYILWEA-----------L 266
Query: 298 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS 357
NE D T + P+LL +ITGKGP KE + + I++ L +V F WLS
Sbjct: 267 NEYDKTLDT--------------PKLLVLITGKGPMKEEFSQYIKKHPLHKVRFCMPWLS 312
Query: 358 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 417
EDYP ++ ADLGVCLHTSSSGLDLPMKVVD+FGCG+PV A+SY I ELV +NGL+
Sbjct: 313 IEDYPQVMACADLGVCLHTSSSGLDLPMKVVDLFGCGVPVIALSYPTISELVHDGENGLI 372
Query: 418 FSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 470
+ S L+ ++ L ++ L L+ G L+ RW EW + P++
Sbjct: 373 VNDSKALSKKMQYLL----THANELNSLKLGALKES-EYRWDDEWNKVIPPIV 420
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q6C3K2|ALG1_YARLI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 252 bits (644), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 175/483 (36%), Positives = 242/483 (50%), Gaps = 83/483 (17%)
Query: 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62
+R R V+VLGDLGRSPRM Y A SLAR +VD+ Y G+KP IL + I IH +
Sbjct: 38 KRKRTIVLVLGDLGRSPRMLYHARSLARS-GHKVDLCGYDGAKPFDEILNNDLIKIHHI- 95
Query: 63 QWPTI--PRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
P I R LP V V +LK + Q ++L+ L K+ D LVQNPPS+PTL V+
Sbjct: 96 --PLILNTRKLPFV---VFGILKVIRQHWLLISLLY-KLRGADYLLVQNPPSIPTLGVVR 149
Query: 121 WASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178
+ + R+ ++DWHNFGYT+L+L L V + + E ++G A LCV
Sbjct: 150 FYNLFLSTRTKVVLDWHNFGYTILALKLPETHPMVKFAKFY-----EGFFGGRAFVHLCV 204
Query: 179 TQAMQHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS 235
T M + + +G+ + L+D+P F P S EK ++ + L+
Sbjct: 205 TVLMGQAMRKTFGMSGRRIVPLHDRPAFHFKPLSESEKLDVLRDFKETLY---------- 254
Query: 236 NAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 295
+ AD I +VSSTS+TPDE+F ILL+A +YD
Sbjct: 255 ----DDMTADHKI------------------IVSSTSYTPDENFNILLDALALYDESKLD 292
Query: 296 ILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW 355
+ P L IITGKGP + K+ +L+LKRV+ RT W
Sbjct: 293 L------------------------PPLRVIITGKGPMMPEFLAKVEKLQLKRVSIRTAW 328
Query: 356 LSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 415
L DYP +LG+A LGV LH SSSG DLPMKVVDMFGCG+PV +V Y+ + ELVK + NG
Sbjct: 329 LEFADYPRILGAAHLGVSLHESSSGYDLPMKVVDMFGCGIPVVSVDYAALSELVKTNTNG 388
Query: 416 LLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL--ITEV 473
+ E+ + + LF + L ++ G + + W W + PL I E
Sbjct: 389 VAVKGHVEMGNTFMSLF----SNRGKLDNIKRGAMIESRNT-WDQTWVKTVGPLFDIGEY 443
Query: 474 ISQ 476
+ Q
Sbjct: 444 VQQ 446
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q59Q79|ALG1_CANAL Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 235/468 (50%), Gaps = 79/468 (16%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
+R + VLGDLG SPRM Y A S ++ + V++ Y ++P I++ +I I +
Sbjct: 49 NKRKTISIFVLGDLGHSPRMCYHASSFSK-LDYYVNLCGYVETEPSHQIVDDVNIDIIPI 107
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
LP ++ +L +++ + + +LW D ++QNPPS+P L+ V
Sbjct: 108 EAIKNT-NNLPYIMFAILKVVRQCGKIWSILW----DTRGSDYIMIQNPPSIPILLIVIL 162
Query: 122 ASSL--RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRCFSVLRIEKYYGKMANGCLCV 178
++ R + I+DWHN YT+L+L +H FV + + + EK G+ AN + V
Sbjct: 163 FKTVFSRETKLIIDWHNLNYTILNLRYNNLNHPFVKLVKLY-----EKILGQFANLNITV 217
Query: 179 TQAMQHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS 235
T++M+ L + +G K LYD+P F P L K E
Sbjct: 218 TKSMKKYLVKEFGFQKSKIVTLYDRPGVQFQP--LSNKREF------------------- 256
Query: 236 NAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 295
M K E ID+ + +++SSTS+TPDEDF ILL+A
Sbjct: 257 ---MSEHKLFE-------DIDI----EKYKVLISSTSFTPDEDFNILLDA---------- 292
Query: 296 ILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTM 354
+ N +++ N P +L I+TGKGP K + E + +L +V ++
Sbjct: 293 LKNYENTPNT---------------PPILLIVTGKGPLKGKFLETVDKLEFTNKVCVKSA 337
Query: 355 WLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 414
WLS+EDYP +L ADLG+ LHTSSSG+DLPMK+VD FGCG+PV ++ + I+ELVK N
Sbjct: 338 WLSSEDYPKVLACADLGISLHTSSSGIDLPMKIVDFFGCGVPVVSLDFPAIDELVKNKVN 397
Query: 415 GLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 462
GL+ +S S+ ++ L D +L+ ++ G LE ++RW W
Sbjct: 398 GLITNSKSDQTKEVARLVTEVFTDDALLRSIKEGALEES-NSRWDENW 444
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|P16661|ALG1_YEAST Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALG1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 237/470 (50%), Gaps = 66/470 (14%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R + VLGD+G SPR+ Y A+S ++ + +V++ Y I P+I +H M+
Sbjct: 38 KKRIIIFVLGDVGHSPRICYHAISFSK-LGWQVELCGYVEDTLPKIISSDPNITVHHMSN 96
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTL-VAVKWA 122
G V+ V +L ++ F LLW ++ D LVQNPPS+P L +AV +
Sbjct: 97 LKR-KGGGTSVIFMVKKVLFQVLSIFKLLW----ELRGSDYILVQNPPSIPILPIAVLY- 150
Query: 123 SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAM 182
L I+DWHN Y++L L + +F S + +E + K A+ L VT+AM
Sbjct: 151 -KLTGCKLIIDWHNLAYSILQLKF--KGNFYHPLVLISYM-VEMIFSKFADYNLTVTEAM 206
Query: 183 QHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGM 239
+ L Q++ + + VLYD+P F P + + + K L +++ + +
Sbjct: 207 RKYLIQSFHLNPKRCAVLYDRPASQFQPLAGDISRQ------KALTTKAFIKNYIRD-DF 259
Query: 240 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 299
+ +K D+ ++V+STS+TPDED GILL A +Y+
Sbjct: 260 DTEKGDK-------------------IIVTSTSFTPDEDIGILLGALKIYENSYVKF--- 297
Query: 300 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAE 359
DS+ P++L ITGKGP KE Y +++ KR +WLSAE
Sbjct: 298 -DSS----------------LPKILCFITGKGPLKEKYMKQVEEYDWKRCQIEFVWLSAE 340
Query: 360 DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 419
DYP LL D GV LHTSSSGLDLPMK++DMFG GLPV A++Y ++ELV+ + NGL F
Sbjct: 341 DYPKLLQLCDYGVSLHTSSSGLDLPMKILDMFGSGLPVIAMNYPVLDELVQHNVNGLKFV 400
Query: 420 SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 469
EL + L+ K D+D+ +KL+ + RW + WE + L
Sbjct: 401 DRRELHESLIFAMK----DADLYQKLKKNVTQEA-ENRWQSNWERTMRDL 445
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q6CVU2|ALG1_KLULA Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 226/463 (48%), Gaps = 71/463 (15%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R +VVLGDLG SPR+ Y A S ++ +V++ Y S IL+ +I IH + +
Sbjct: 42 KTRILIVVLGDLGHSPRILYHARSFSKA-GFQVELSGYVDSDIPTDILDDDNIEIHGLKK 100
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
+ + L K LK L Q + W K+ + D L+QNPP++P L
Sbjct: 101 YGSEKGLLVKALKQGL-------QLCSMFW----KLRAVDYILLQNPPTIPILPIAVVVK 149
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQ 183
+ R+ I+DWHN GYT+L + + F+ + L IE + K AN L VT+AM+
Sbjct: 150 TFSRAKLIIDWHNLGYTILQMKF--KDQFLHPLVLLAYL-IEWIFAKFANYHLTVTKAMK 206
Query: 184 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 240
L + +GI K VLYD+P + F P + E + Q+ ++
Sbjct: 207 TYLVEKFGIDGKKIAVLYDRPGKQFSPLKEADDREALLK-----------QEFIAKY--- 252
Query: 241 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 300
I ++ + V+STS+TPDED +L+ + +Y+
Sbjct: 253 --------------IPKEFDISKDKIFVTSTSFTPDEDISVLIGSFKIYENSFQKF---- 294
Query: 301 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAED 360
D T PR+L ITGKGP +E ++++ + RV +WLS+ED
Sbjct: 295 DQT----------------LPRILCFITGKGPLQEKIVKQVQDFKWDRVQVEFLWLSSED 338
Query: 361 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 420
YP LL D GV LHTSSSGLDLPMK++DMFG GLPV ++Y ++ELV+ + NGL F+
Sbjct: 339 YPKLLRLCDYGVSLHTSSSGLDLPMKILDMFGSGLPVICMNYPVLDELVQQNVNGLKFAD 398
Query: 421 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE 463
EL + L+ K D V ++++ G L RW WE
Sbjct: 399 RRELHEALIFSVK----DEQVHQEIKRGALRES-KNRWNESWE 436
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q6FLZ2|ALG1_CANGA Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 214 bits (546), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 157/476 (32%), Positives = 234/476 (49%), Gaps = 79/476 (16%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R + VLGD+G SPRM Y A S + + +V++ Y + I E P+I +H +
Sbjct: 40 KKRIIIYVLGDIGHSPRMCYHARSFSEK-GWQVELCGYVEEQVPGFIAEDPNIIVHAL-- 96
Query: 64 WPTI-----PRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTL-V 117
PT+ R + ++K VL + +I LW ++ + L+QNPPS+P L +
Sbjct: 97 -PTLTLQGNKRSIIFLVKKVLFQVSAIIA---QLW----ELRGSNYMLIQNPPSIPILPI 148
Query: 118 AVKWASSLRRSAFIVDWHNFGYTLLSLSL-GRRSHFVSIYRCFSVLRIEKYYGKMANGCL 176
AV + L I+DWHN Y+++ L G H V + IE +GK A L
Sbjct: 149 AVFY--RLSGCKLIIDWHNLAYSIMQLKFNGNFYHPV----VLASYVIEYIFGKFATYNL 202
Query: 177 CVTQAMQHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDC 233
VT+AM+ L ++G+ + VLYD+P F P + E K+L ++D
Sbjct: 203 TVTEAMKEYLVNSFGLNPKRCVVLYDRPATQFKPLTESESR------TKLLDSEF-IRDM 255
Query: 234 VSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 293
+ G +K D+ ++V+STS+TPDED IL+ A +YD
Sbjct: 256 IPE-GFNVEKGDK-------------------IIVTSTSFTPDEDISILIGALKIYDNSY 295
Query: 294 AAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRT 353
N D S P++L +TGKGP KE Y + + + V +
Sbjct: 296 E---NLDKSL-----------------PKILCFVTGKGPMKERYVKDVEEHDWQHVYVKF 335
Query: 354 MWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 413
+WL +EDYP LL D GV LH SSSGLDLPMK++DM+G G+PV A +Y + ELVK ++
Sbjct: 336 VWLKSEDYPRLLQLCDYGVSLHKSSSGLDLPMKILDMYGSGIPVIAYNYPVLGELVKYNE 395
Query: 414 NGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 469
NGL F EL + L+ K D ++ KKL+ G L+ RW + W+ + L
Sbjct: 396 NGLKFLDRRELHESLIFAMK----DPELYKKLKQGALKES-QIRWNSSWQSAMQEL 446
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 479 | ||||||
| 302142187 | 484 | unnamed protein product [Vitis vinifera] | 0.983 | 0.973 | 0.788 | 0.0 | |
| 225458860 | 598 | PREDICTED: chitobiosyldiphosphodolichol | 0.981 | 0.785 | 0.786 | 0.0 | |
| 388521579 | 484 | unknown [Medicago truncatula] | 0.983 | 0.973 | 0.774 | 0.0 | |
| 356555181 | 521 | PREDICTED: chitobiosyldiphosphodolichol | 0.983 | 0.904 | 0.767 | 0.0 | |
| 224121616 | 481 | predicted protein [Populus trichocarpa] | 0.972 | 0.968 | 0.783 | 0.0 | |
| 357451823 | 498 | Chitobiosyldiphosphodolichol beta-mannos | 0.979 | 0.941 | 0.771 | 0.0 | |
| 255582792 | 476 | beta1,4 mannosyltransferase, putative [R | 0.972 | 0.978 | 0.767 | 0.0 | |
| 449445120 | 480 | PREDICTED: chitobiosyldiphosphodolichol | 0.983 | 0.981 | 0.743 | 0.0 | |
| 297850068 | 465 | predicted protein [Arabidopsis lyrata su | 0.968 | 0.997 | 0.713 | 0.0 | |
| 15219285 | 465 | beta-1,4-mannosyltransferase [Arabidopsi | 0.968 | 0.997 | 0.709 | 0.0 |
| >gi|302142187|emb|CBI19390.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/478 (78%), Positives = 414/478 (86%), Gaps = 7/478 (1%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
+GRRGRA VVVLGD+GRSPRMQY ALSLARQ SLEVD+VAYGGS PH+A+LE+PSIHIHT
Sbjct: 9 IGRRGRAAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGSTPHSAVLENPSIHIHT 68
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWPTIPR + K+ P++LL K L QFF L WFLCVKI SPDVF+VQNPPSVPTLVAVK
Sbjct: 69 MKQWPTIPRIVSKIFYPLVLLFKALFQFFTLFWFLCVKIPSPDVFIVQNPPSVPTLVAVK 128
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180
WAS LR SAFIVDWHNFGYTLL LSLGR S FV++Y F EKYYGK ANG LCVT+
Sbjct: 129 WASWLRNSAFIVDWHNFGYTLLGLSLGRSSRFVALYHWF-----EKYYGKAANGSLCVTR 183
Query: 181 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 240
AMQHELAQNWGIKATVLYDQPPEFF PT +EEKH+LFCRL+K L P G QDCV+ ME
Sbjct: 184 AMQHELAQNWGIKATVLYDQPPEFFRPTPMEEKHKLFCRLHKDLCHPRGGQDCVTAGTME 243
Query: 241 --GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILN 298
Q DET+FT+ D+FLK NRPALVVSSTSWTPDEDFG+LLEAA+MYDRRVAAILN
Sbjct: 244 LWNQDTDETLFTAKMDTDIFLKSNRPALVVSSTSWTPDEDFGMLLEAAVMYDRRVAAILN 303
Query: 299 EDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSA 358
EDDST EEV KE + GKQ+LYPRLLFIITGKGP+KE YEEKIR+L+L RVAFRTMWLSA
Sbjct: 304 EDDSTKEEVLWKETNSGKQFLYPRLLFIITGKGPNKEKYEEKIRQLKLNRVAFRTMWLSA 363
Query: 359 EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 418
EDYPLLLGSADLG+CLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV+KNGLLF
Sbjct: 364 EDYPLLLGSADLGICLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVEKNGLLF 423
Query: 419 SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 476
SSSSELA++LLMLFKGFPD+ D LK LRNG +E G SARW TEWE HAKPLI++VIS+
Sbjct: 424 SSSSELANELLMLFKGFPDNCDALKLLRNGVVEAGFSARWDTEWERHAKPLISKVISE 481
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458860|ref|XP_002283369.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/477 (78%), Positives = 411/477 (86%), Gaps = 7/477 (1%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
+GRRGRA VVVLGD+GRSPRMQY ALSLARQ SLEVD+VAYGGS PH+A+LE+PSIHIHT
Sbjct: 124 IGRRGRAAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGSTPHSAVLENPSIHIHT 183
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWPTIPR + K+ P++LL K L QFF L WFLCVKI SPDVF+VQNPPSVPTLVAVK
Sbjct: 184 MKQWPTIPRIVSKIFYPLVLLFKALFQFFTLFWFLCVKIPSPDVFIVQNPPSVPTLVAVK 243
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180
WAS LR SAFIVDWHNFGYTLL LSLGR S FV++Y F EKYYGK ANG LCVT+
Sbjct: 244 WASWLRNSAFIVDWHNFGYTLLGLSLGRSSRFVALYHWF-----EKYYGKAANGSLCVTR 298
Query: 181 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 240
AMQHELAQNWGIKATVLYDQPPEFF PT +EEKH+LFCRL+K L P G QDCV+ ME
Sbjct: 299 AMQHELAQNWGIKATVLYDQPPEFFRPTPMEEKHKLFCRLHKDLCHPRGGQDCVTAGTME 358
Query: 241 --GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILN 298
Q DET+FT+ D+FLK NRPALVVSSTSWTPDEDFG+LLEAA+MYDRRVAAILN
Sbjct: 359 LWNQDTDETLFTAKMDTDIFLKSNRPALVVSSTSWTPDEDFGMLLEAAVMYDRRVAAILN 418
Query: 299 EDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSA 358
EDDST EEV KE + GKQ+LYPRLLFIITGKGP+KE YEEKIR+L+L RVAFRTMWLSA
Sbjct: 419 EDDSTKEEVLWKETNSGKQFLYPRLLFIITGKGPNKEKYEEKIRQLKLNRVAFRTMWLSA 478
Query: 359 EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 418
EDYPLLLGSADLG+CLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV+KNGLLF
Sbjct: 479 EDYPLLLGSADLGICLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVEKNGLLF 538
Query: 419 SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 475
SSSSELA++LLMLFKGFPD+ D LK LRNG +E G SARW TEWE HAKPLI++ S
Sbjct: 539 SSSSELANELLMLFKGFPDNCDALKLLRNGVVEAGFSARWDTEWERHAKPLISKASS 595
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388521579|gb|AFK48851.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/478 (77%), Positives = 417/478 (87%), Gaps = 7/478 (1%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSL+ Q LEVD+VAYGGS+PH ++L +PSIHIH M
Sbjct: 12 GRRGRACVVVLGDIGRSPRMQYHALSLSNQAFLEVDIVAYGGSEPHTSLLANPSIHIHLM 71
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QWPT + LPK+L+P +LLLKPLIQF MLLW+LCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 72 KQWPTARQNLPKILQPFMLLLKPLIQFVMLLWYLCVKIPSPDIFIVQNPPSVPTLVAVKW 131
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQA 181
AS LR S+F++DWHNFGYTLL +SLGR S FVS+Y+ F EK+YGKMA+ LCVT+A
Sbjct: 132 ASWLRNSSFVIDWHNFGYTLLGMSLGRNSRFVSLYKWF-----EKHYGKMADTSLCVTKA 186
Query: 182 MQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG--M 239
MQHELAQNWGI ATVLYDQPP+FFHP SLEE+H+LFCRLN+ + PLGV DCVSN M
Sbjct: 187 MQHELAQNWGINATVLYDQPPDFFHPASLEERHKLFCRLNEHFYHPLGVGDCVSNGTSLM 246
Query: 240 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 299
Q +ET+FT+ AG +V LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE
Sbjct: 247 SSQIQNETLFTTEAGSNVSLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 306
Query: 300 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAE 359
DDS +EEV KEISDGKQ LYPRLLF+ITGKGP+K YE KI+ L+LKRVAFRTMWLSA+
Sbjct: 307 DDSLDEEVIWKEISDGKQCLYPRLLFVITGKGPEKAKYEAKIKSLKLKRVAFRTMWLSAD 366
Query: 360 DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 419
DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELV VDKNGLLFS
Sbjct: 367 DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVSVDKNGLLFS 426
Query: 420 SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQF 477
SSSELAD+LL LFKGFP++ D LK L++G L+ G S+RW TEWEEHAKPLITEVIS+F
Sbjct: 427 SSSELADELLTLFKGFPNECDSLKVLKSGALDTGASSRWVTEWEEHAKPLITEVISRF 484
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555181|ref|XP_003545914.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/481 (76%), Positives = 417/481 (86%), Gaps = 10/481 (2%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSLA Q SLEVD+VAYGGS+PH A+L +PSIHI+ M
Sbjct: 11 GRRGRACVVVLGDIGRSPRMQYHALSLANQASLEVDIVAYGGSEPHTALLANPSIHIYIM 70
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QW T + LPK+L+P++LLLKPL+QF MLLWFLCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 71 KQWLTASQSLPKILRPIMLLLKPLVQFCMLLWFLCVKIPSPDIFIVQNPPSVPTLVAVKW 130
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQA 181
AS LR S+F++DWHNFGYTLL+LSLGR SHFVS+Y+ F EK+YGKMA+ LCVT+A
Sbjct: 131 ASWLRNSSFVIDWHNFGYTLLALSLGRNSHFVSLYKWF-----EKHYGKMADASLCVTKA 185
Query: 182 MQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEG 241
MQHELAQNWGI ATVLYDQPP+ FHP SLEE+H+LFCRLN+ L + LGV+DCVSN +
Sbjct: 186 MQHELAQNWGINATVLYDQPPDIFHPASLEERHKLFCRLNEDLFRSLGVRDCVSNGKIGN 245
Query: 242 Q-----KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAI 296
+ET+F + G +++LKPNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAAI
Sbjct: 246 SLVASCHQNETLFATEVGSNIYLKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAI 305
Query: 297 LNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL 356
L EDDS +EEV KEISDGKQ LYPRLLFIITGKGP+KE YE KI+R++LKRVAFRTMWL
Sbjct: 306 LGEDDSVDEEVIWKEISDGKQCLYPRLLFIITGKGPEKEKYEVKIKRMKLKRVAFRTMWL 365
Query: 357 SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL 416
SA+DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELV+VDKNGL
Sbjct: 366 SADDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIRELVRVDKNGL 425
Query: 417 LFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 476
LFSSSSELAD+LL+LFKGFPDD D LK L+ G LE G S+RWATEWEEHAKPLITE S
Sbjct: 426 LFSSSSELADELLLLFKGFPDDCDALKVLKYGALETGSSSRWATEWEEHAKPLITEASSF 485
Query: 477 F 477
F
Sbjct: 486 F 486
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121616|ref|XP_002330745.1| predicted protein [Populus trichocarpa] gi|222872521|gb|EEF09652.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/475 (78%), Positives = 412/475 (86%), Gaps = 9/475 (1%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGD+GRSPRMQY ALSLARQ SL+VD+VAYGGS+PH A+ E+ SIHIH
Sbjct: 1 MGKRGRACVVVLGDIGRSPRMQYHALSLARQASLQVDIVAYGGSEPHMALRENQSIHIHK 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWP IP+GLPK+ KP +LLLKPL QF MLLW+LCVKI PDVFLVQNPPSVPTLVAVK
Sbjct: 61 MKQWPAIPQGLPKMFKPFMLLLKPLFQFLMLLWYLCVKIPPPDVFLVQNPPSVPTLVAVK 120
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180
WAS LR + FIVDWHNFGYTLL+LSLGR S FV++YR F E++YGKMA+G LCVT+
Sbjct: 121 WASWLRNAKFIVDWHNFGYTLLALSLGRNSRFVTVYRWF-----ERHYGKMAHGSLCVTR 175
Query: 181 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA--G 238
AMQHEL QNWGIKA VLYDQPPEFFHP SLEEKH+LFCRL K + + GV DC S+ G
Sbjct: 176 AMQHELTQNWGIKAAVLYDQPPEFFHPASLEEKHKLFCRLGKHISESQGVHDCASHGAVG 235
Query: 239 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILN 298
M +ET+FT++ D+FLKPNRPALVVSSTSWT DEDFGILLEAA+MYDRRVAAILN
Sbjct: 236 MGSPNLNETLFTTMVADDIFLKPNRPALVVSSTSWTADEDFGILLEAAVMYDRRVAAILN 295
Query: 299 EDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSA 358
EDDST EV E+S GK+ LYPRLLFIITGKGP+KE YEEKIRRL LKRVAFRTMWLSA
Sbjct: 296 EDDST-VEVLWNEMSAGKECLYPRLLFIITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSA 354
Query: 359 EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 418
EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV+YSCI+ELVKV+KNGLLF
Sbjct: 355 EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVAYSCIKELVKVEKNGLLF 414
Query: 419 SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 473
SSSSELAD+LLMLFKGFP++ D LK LRNG LEMG S+RWATEWEEHAKPLI+E
Sbjct: 415 SSSSELADELLMLFKGFPEECDALKLLRNGALEMG-SSRWATEWEEHAKPLISEA 468
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357451823|ref|XP_003596188.1| Chitobiosyldiphosphodolichol beta-mannosyltransferase [Medicago truncatula] gi|355485236|gb|AES66439.1| Chitobiosyldiphosphodolichol beta-mannosyltransferase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/476 (77%), Positives = 413/476 (86%), Gaps = 7/476 (1%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSL+ Q LEVD+VAYGGS+PH ++L +PSIHIH M
Sbjct: 12 GRRGRACVVVLGDIGRSPRMQYHALSLSNQAFLEVDIVAYGGSEPHTSLLANPSIHIHLM 71
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QWPT + LPK+L+P +LLLKPLIQF MLLW+LCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 72 KQWPTARQNLPKILQPFMLLLKPLIQFVMLLWYLCVKIPSPDIFIVQNPPSVPTLVAVKW 131
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQA 181
AS LR S+F++DWHNFGYTLL +SLGR S FVS+Y+ F EK+YGKMA+ LCVT+A
Sbjct: 132 ASWLRNSSFVIDWHNFGYTLLGMSLGRNSRFVSLYKWF-----EKHYGKMADTSLCVTKA 186
Query: 182 MQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG--M 239
MQHELAQNWGI ATVLYDQPP+FFHP SLEE+H+LFCRLN+ + PLGV DCVSN M
Sbjct: 187 MQHELAQNWGINATVLYDQPPDFFHPASLEERHKLFCRLNEHFYHPLGVGDCVSNGTSLM 246
Query: 240 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 299
Q +ET+FT+ AG +V LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE
Sbjct: 247 SSQIQNETLFTTEAGSNVSLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 306
Query: 300 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAE 359
DDS +EEV KEISDGKQ LYPRLLF+ITGKGP+K YE KI+ L+LKRVAFRTMWLSA+
Sbjct: 307 DDSLDEEVIWKEISDGKQCLYPRLLFVITGKGPEKAKYEAKIKSLKLKRVAFRTMWLSAD 366
Query: 360 DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 419
DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELV VDKNGLLFS
Sbjct: 367 DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVSVDKNGLLFS 426
Query: 420 SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 475
SSSELAD+LL LFKGFP++ D LK L++G L+ G S+RW TEWEEHAKPLITE S
Sbjct: 427 SSSELADELLTLFKGFPNECDSLKVLKSGALDTGASSRWVTEWEEHAKPLITEASS 482
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255582792|ref|XP_002532170.1| beta1,4 mannosyltransferase, putative [Ricinus communis] gi|223528138|gb|EEF30207.1| beta1,4 mannosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/473 (76%), Positives = 412/473 (87%), Gaps = 7/473 (1%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
RGRACVVVLGD+GRSPRMQY ALSLA Q SL+VD+VAYGGS+PH A+L++ SIHIH M Q
Sbjct: 8 RGRACVVVLGDIGRSPRMQYHALSLALQASLQVDIVAYGGSEPHMALLQNQSIHIHKMKQ 67
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
WP +P+ LPK+LK ++L+LKPL QFF+LLW LC K+ +PDVF+VQNPPSVPTLVAVKWAS
Sbjct: 68 WPVLPQSLPKLLKALVLVLKPLFQFFVLLWHLCFKVPAPDVFIVQNPPSVPTLVAVKWAS 127
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQ 183
LR SAFIVDWHNFGYTLL+LSLGR S FV++YR F E++YG+MANG LCVT+AMQ
Sbjct: 128 WLRNSAFIVDWHNFGYTLLALSLGRNSRFVAVYRWF-----ERHYGRMANGSLCVTKAMQ 182
Query: 184 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 243
HELAQNWGI ATVLYDQPPEFF+PTSLEEKH+LFCRL+K + QP + DC S GM
Sbjct: 183 HELAQNWGINATVLYDQPPEFFNPTSLEEKHKLFCRLDKYIIQPGSIHDCAS-YGMGNHN 241
Query: 244 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 303
+ET+FT+ D LKPNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAAILNE+DS+
Sbjct: 242 VNETMFTTSVDGDTILKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAILNENDSS 301
Query: 304 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 363
+EV KE++ GKQ LYPRLLF+ITGKGP+KE YEEKIRRL LKRVAFRTMWLSAEDYPL
Sbjct: 302 LDEVLWKELTKGKQCLYPRLLFVITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSAEDYPL 361
Query: 364 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 423
LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV+YSCI+ELV+VDKNGLLFSSSSE
Sbjct: 362 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVAYSCIKELVEVDKNGLLFSSSSE 421
Query: 424 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 476
LAD+LLMLFK +PD+ + LK LRNG LE S+RWATEWE HAKPLITEVIS+
Sbjct: 422 LADELLMLFKSYPDECNALKLLRNGALEKS-SSRWATEWEAHAKPLITEVISK 473
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445120|ref|XP_004140321.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Cucumis sativus] gi|449507727|ref|XP_004163113.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/479 (74%), Positives = 405/479 (84%), Gaps = 8/479 (1%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
G+ GRACVVVLGDLGRSPRMQY ALSLARQ +LEVD+VAYGGS+PH+A+LEH SIHIHTM
Sbjct: 9 GKGGRACVVVLGDLGRSPRMQYHALSLARQANLEVDIVAYGGSQPHSALLEHRSIHIHTM 68
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T WP + LP + +PV LL+KPL+QF MLLWFL V+I SP F+VQNPPSVPTL+AVKW
Sbjct: 69 TPWPKFLQNLPWIFRPVTLLVKPLVQFLMLLWFL-VRICSPAFFIVQNPPSVPTLIAVKW 127
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQA 181
S L+RSAFI+DWHNFG+TLL+LSLGR S FV++YR IEKY+GKMA+ CVT+A
Sbjct: 128 VSVLKRSAFIIDWHNFGHTLLALSLGRNSSFVAVYRW-----IEKYFGKMADDSFCVTKA 182
Query: 182 MQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS-NAGME 240
MQHELA+NW IKATV YDQPPEFFH SL EKHELF RL+ + QPLG+QDCVS AGM
Sbjct: 183 MQHELAENWDIKATVFYDQPPEFFHVASLLEKHELFYRLHSNIIQPLGLQDCVSYGAGML 242
Query: 241 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 300
G + ET T L G D+FLK NRPA+VVSSTSWTPDEDF ILLEAA+MYDRRVAA+LNED
Sbjct: 243 GHEHQETFSTRLVGKDIFLKQNRPAVVVSSTSWTPDEDFNILLEAAVMYDRRVAALLNED 302
Query: 301 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAED 360
DS +E KEI D KQ L+PRLLFIITGKGPDK+ YE+KI +L LKRVAFRTMWLSAED
Sbjct: 303 DSIPDEFVWKEIYDEKQCLFPRLLFIITGKGPDKQEYEDKISKLHLKRVAFRTMWLSAED 362
Query: 361 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 420
YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELVKV KNGLLFSS
Sbjct: 363 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCINELVKVGKNGLLFSS 422
Query: 421 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD 479
SSELAD+LLMLF+GFP++ + L L+ T+EMG S RW+TEWEEHAKPLI++VI+Q+ D
Sbjct: 423 SSELADELLMLFRGFPNECNDLHSLKKSTVEMG-SRRWSTEWEEHAKPLISQVITQYQD 480
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297850068|ref|XP_002892915.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297338757|gb|EFH69174.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/479 (71%), Positives = 390/479 (81%), Gaps = 15/479 (3%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + PK+L PV LLLK IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFLQLFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + FVS+YR F E +YGKMA G LCVT+
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLFVSLYRWF-----ENHYGKMATGSLCVTK 174
Query: 181 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 240
AMQHEL QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E
Sbjct: 175 AMQHELDQNWGVRAQVLYDQPPEFFRPALLEERHELFCRVKKDLCHPIGVYDIIS-IELE 233
Query: 241 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 300
Q+ +ET+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA
Sbjct: 234 NQELNETLFTTKINTDISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAARSKGS 293
Query: 301 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAED 360
++ EIS+ Q+LYP LLFIITGKGP+KE YE KI+RL L+ VAFRTMWL+AED
Sbjct: 294 ETA-------EISE-DQHLYPNLLFIITGKGPEKEMYEGKIKRLNLRHVAFRTMWLAAED 345
Query: 361 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 420
YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK KNGLLFSS
Sbjct: 346 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSS 405
Query: 421 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD 479
SSELADQLL+LFKGFP + D L L+ G +E G S RWATEWE+ AKPLIT+V+SQ D
Sbjct: 406 SSELADQLLILFKGFPGNCDALMSLKAGAMETGSSGRWATEWEDCAKPLITQVVSQIAD 464
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15219285|ref|NP_173105.1| beta-1,4-mannosyltransferase [Arabidopsis thaliana] gi|22136000|gb|AAM91582.1| unknown protein [Arabidopsis thaliana] gi|31376395|gb|AAP49524.1| At1g16570 [Arabidopsis thaliana] gi|332191351|gb|AEE29472.1| beta-1,4-mannosyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/479 (70%), Positives = 389/479 (81%), Gaps = 15/479 (3%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + PK+L PV LLLK IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFIQYFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + VS+YR E +YGKMA G LCVT+
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLLVSLYRW-----SENHYGKMATGSLCVTK 174
Query: 181 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 240
AMQHEL QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E
Sbjct: 175 AMQHELDQNWGVRAKVLYDQPPEFFRPALLEERHELFCRVRKDLCHPIGVYDFISRE-LE 233
Query: 241 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 300
Q+ +ET+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA
Sbjct: 234 NQELNETLFTTKFNADISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAARSKGS 293
Query: 301 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAED 360
++ EIS+ +Q+ YP LLFIITGKGP+KE YEEKI+RL L+ VAFRTMWL+AED
Sbjct: 294 ETA-------EISE-EQHHYPNLLFIITGKGPEKEMYEEKIKRLNLRHVAFRTMWLAAED 345
Query: 361 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 420
YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK KNGLLFSS
Sbjct: 346 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSS 405
Query: 421 SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFDD 479
SSELADQLL+LFKGFP + D L L+ G +E G S RWATEWE+ AKPLIT+V+SQ D
Sbjct: 406 SSELADQLLILFKGFPGNCDALMSLKAGAMETGSSGRWATEWEDCAKPLITQVVSQIAD 464
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 479 | ||||||
| TAIR|locus:2017963 | 496 | AT1G16570 [Arabidopsis thalian | 0.876 | 0.846 | 0.701 | 4.2e-171 | |
| ZFIN|ZDB-GENE-030131-6093 | 488 | alg1 "asparagine-linked glycos | 0.563 | 0.553 | 0.397 | 2.4e-91 | |
| UNIPROTKB|E1BRK4 | 462 | ALG1 "Uncharacterized protein" | 0.569 | 0.590 | 0.379 | 2.7e-88 | |
| FB|FBgn0038552 | 446 | CG18012 [Drosophila melanogast | 0.576 | 0.618 | 0.385 | 3.1e-87 | |
| MGI|MGI:2384774 | 482 | Alg1 "asparagine-linked glycos | 0.574 | 0.570 | 0.373 | 3.5e-86 | |
| UNIPROTKB|Q9BT22 | 464 | ALG1 "Chitobiosyldiphosphodoli | 0.565 | 0.584 | 0.375 | 1.5e-85 | |
| RGD|1310700 | 481 | Alg1 "ALG1, chitobiosyldiphosp | 0.574 | 0.571 | 0.373 | 2.4e-85 | |
| UNIPROTKB|D4A5S6 | 465 | Alg1 "Protein Alg1" [Rattus no | 0.574 | 0.591 | 0.373 | 2.4e-85 | |
| UNIPROTKB|F1N2J7 | 464 | ALG1 "Uncharacterized protein" | 0.576 | 0.594 | 0.384 | 3.1e-85 | |
| UNIPROTKB|F1RKX2 | 468 | LOC100524193 "Uncharacterized | 0.586 | 0.600 | 0.372 | 2.2e-84 |
| TAIR|locus:2017963 AT1G16570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1521 (540.5 bits), Expect = 4.2e-171, Sum P(2) = 4.2e-171
Identities = 305/435 (70%), Positives = 346/435 (79%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFIQYFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + VS+YR +S E +YGKMA G LCVT+
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLLVSLYR-WS----ENHYGKMATGSLCVTK 174
Query: 181 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 240
AMQHEL QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E
Sbjct: 175 AMQHELDQNWGVRAKVLYDQPPEFFRPALLEERHELFCRVRKDLCHPIGVYDFISRE-LE 233
Query: 241 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 300
Q+ +ET+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA
Sbjct: 234 NQELNETLFTTKFNADISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAA----- 288
Query: 301 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAED 360
S E EIS+ +Q+ YP LLFIITGKGP+KE YEEKI+RL L+ VAFRTMWL+AED
Sbjct: 289 RSKGSET--AEISE-EQHHYPNLLFIITGKGPEKEMYEEKIKRLNLRHVAFRTMWLAAED 345
Query: 361 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 420
YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK KNGLLFSS
Sbjct: 346 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSS 405
Query: 421 SSELADQLLMLFKGF 435
SSELADQLL+ F
Sbjct: 406 SSELADQLLVSNSSF 420
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| ZFIN|ZDB-GENE-030131-6093 alg1 "asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 491 (177.9 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 114/287 (39%), Positives = 163/287 (56%)
Query: 8 CVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTI 67
CV+VLGD+GRSPRMQY ALSL++ V ++ + G+KPH ILE I I +++
Sbjct: 58 CVLVLGDIGRSPRMQYHALSLSKH-GYNVTIIGFLGTKPHQDILEDDRIDILPISEL--- 113
Query: 68 PRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW-ASSLR 126
+G +Q F LL+ L + I L+QNPP +P +AV W AS +R
Sbjct: 114 -KGLTVGPRIFRYISKVTLQSFQLLYVL-MTIEDQGYILMQNPPGLPA-IAVTWMASRIR 170
Query: 127 RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHEL 186
+ FI+DWHN+GYT+++LS G V + + + EK +G +++ LCVT AM+ +L
Sbjct: 171 GNQFIIDWHNYGYTIMALSHGENHLIVRLAKWY-----EKIFGCLSDHNLCVTSAMREDL 225
Query: 187 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADE 246
+NW I+AT LYD+PP F T L+ +HELF R+ + P V+ ME E
Sbjct: 226 CKNWNIEATTLYDKPPSIFRETPLKLQHELFVRMGSA-YLPFRPSSAVTKEYMELTAFTE 284
Query: 247 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 293
+ G V RPAL++SSTSWT DEDF +LL+A Y++ V
Sbjct: 285 R--NTQTGA-VTRSAGRPALLISSTSWTEDEDFSVLLQALEEYEKFV 328
|
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| UNIPROTKB|E1BRK4 ALG1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 455 (165.2 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
Identities = 110/290 (37%), Positives = 164/290 (56%)
Query: 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW 64
GR CV VLGDLGRSPRMQY ALSLAR V ++ Y ++PH +L I + +++
Sbjct: 30 GRVCVAVLGDLGRSPRMQYHALSLARH-GRGVALLGYFQTRPHRDVLSSGEIRVVPLSEL 88
Query: 65 PTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS 124
+ G Q LL+ + +++ P L+QNPP +P+ +AV W +
Sbjct: 89 RCLRVGPKLFQYVVKVVA----QTVQLLYTM-LRMDPPSYVLLQNPPGLPS-IAVAWVAC 142
Query: 125 LR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQ 183
L RS I+DWHN+GYT++SL+ GR V I + + EK +G++++ LCVT AM+
Sbjct: 143 LFWRSKLIIDWHNYGYTIMSLNHGRNHPLVLIAKWY-----EKLFGRLSDYNLCVTDAMK 197
Query: 184 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 243
+L N IKA LYD+P +F T LE +H+L+ +L K ++P + + ++
Sbjct: 198 EDLWVNCNIKAVTLYDRPASYFKETPLELQHQLYLKLAKD-YEPF--KPHTESVSWNAER 254
Query: 244 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 293
+ T +G DV RPAL++SSTSWT DEDF +LL+A Y++ V
Sbjct: 255 SAFTERDEKSG-DVIKSRGRPALLISSTSWTEDEDFSVLLKALEDYEQYV 303
|
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| FB|FBgn0038552 CG18012 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 495 (179.3 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
Identities = 114/296 (38%), Positives = 162/296 (54%)
Query: 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62
++ ACV+VLGD+GRSPRMQY A SL + + VD++ Y ++P + +HP IH +T
Sbjct: 7 KKRNACVIVLGDIGRSPRMQYHAQSLLEE-NYHVDMIGYLETRPLEELTQHPRCRIHELT 65
Query: 63 QWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWA 122
P Q LL L + I P LVQNPP +PTL+
Sbjct: 66 AVPV-----TNLTPKLRLLFKAFWQTLSLLMAL-ISIGRPSFLLVQNPPGIPTLIVCYLY 119
Query: 123 SSLRRSAFIVDWHNFGYTLLSLSL--GRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180
++ R+ +DWHN+ YT+L+L + G +S + + R R+E+Y+G A+ CVT+
Sbjct: 120 CAVTRTKLAIDWHNYTYTVLALGMSKGEQSPLIRLVR-----RLERYFGSKAHTHFCVTR 174
Query: 181 AMQHELAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGM 239
AMQ +L QNWGI VLYD+ P FHP L KHEL+ +L K Q +D + +
Sbjct: 175 AMQEDLQQNWGIGPVKVLYDRAPAQFHPIDLTHKHELYLKLAKDYPQ-FQAKDAEQSDVL 233
Query: 240 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 295
E + + +G+ V +P R A++VSSTSWTPDEDFGILL+A Y+ A
Sbjct: 234 EATALTQKL---ASGV-VQYRPQRQAVLVSSTSWTPDEDFGILLKALQAYEETAQA 285
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| MGI|MGI:2384774 Alg1 "asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 446 (162.1 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 109/292 (37%), Positives = 161/292 (55%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L++ I I +
Sbjct: 30 GRARHMVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQNDRIRIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRMDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180
+ S ++DWHN+GY+++ L G R V + + + EK++G++++ LCVT
Sbjct: 143 FVGCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWY-----EKFFGRLSHLNLCVTN 197
Query: 181 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 240
AM+ +LA+NW ++A LYD+P FF T L+ +HELF +L+ + P Q C + +
Sbjct: 198 AMREDLAENWCVRAVTLYDKPASFFKETPLDLQHELFMKLSHT-YSPF--QSCSDPSHPD 254
Query: 241 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 292
+++ T +G+ V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 255 TERSAFTERDCQSGV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
|
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| UNIPROTKB|Q9BT22 ALG1 "Chitobiosyldiphosphodolichol beta-mannosyltransferase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 441 (160.3 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
Identities = 111/296 (37%), Positives = 162/296 (54%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGRA VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRAARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G +Q LLW L + +FL QNPP +P+ +A
Sbjct: 86 VGLTELQSLAVGPRVFQYGVKVV----LQAMYLLWKLMWREPGAYIFL-QNPPGLPS-IA 139
Query: 119 VKW-ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLC 177
V W L S ++DWHN+GY+++ L G V + + + EK++G++++ LC
Sbjct: 140 VCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWY-----EKFFGRLSHLNLC 194
Query: 178 VTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA 237
VT AM+ +LA NW I+A +YD+P FF T L+ +H LF +L +H P + +
Sbjct: 195 VTNAMREDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGS-MHSPFRAR-----S 248
Query: 238 GMEGQKADETIFTSL-AGIDVFLK-PNRPALVVSSTSWTPDEDFGILLEAALMYDR 291
E + + FT AG + + RPAL+VSSTSWT DEDF ILL A +++
Sbjct: 249 EPEDPVTERSAFTERDAGSGLVTRLRERPALLVSSTSWTEDEDFSILLAALEKFEQ 304
|
|
| RGD|1310700 Alg1 "ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 444 (161.4 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 109/292 (37%), Positives = 161/292 (55%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L+ I I +
Sbjct: 30 GRARHVVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQSDRIQIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRTDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180
+ S ++DWHN+GY+++ L G R V + + + EK++G++++ LCVT
Sbjct: 143 FVCCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWY-----EKFFGRLSHLNLCVTH 197
Query: 181 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 240
AM+ +LA+NW ++A LYD+P FF T L+ +HELF +L++ + P Q C + +
Sbjct: 198 AMREDLAENWCLRAVTLYDKPASFFKETPLDLQHELFMKLSRT-YSPF--QSCSEPSDPD 254
Query: 241 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 292
+++ T S + + V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 255 TERSAFTERDSQSRV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
|
|
| UNIPROTKB|D4A5S6 Alg1 "Protein Alg1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 444 (161.4 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 109/292 (37%), Positives = 161/292 (55%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L+ I I +
Sbjct: 30 GRARHVVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQSDRIQIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRTDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180
+ S ++DWHN+GY+++ L G R V + + + EK++G++++ LCVT
Sbjct: 143 FVCCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWY-----EKFFGRLSHLNLCVTH 197
Query: 181 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 240
AM+ +LA+NW ++A LYD+P FF T L+ +HELF +L++ + P Q C + +
Sbjct: 198 AMREDLAENWCLRAVTLYDKPASFFKETPLDLQHELFMKLSRT-YSPF--QSCSEPSDPD 254
Query: 241 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 292
+++ T S + + V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 255 TERSAFTERDSQSRV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
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| UNIPROTKB|F1N2J7 ALG1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 451 (163.8 bits), Expect = 3.1e-85, Sum P(2) = 3.1e-85
Identities = 113/294 (38%), Positives = 164/294 (55%)
Query: 2 GRRGR-ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
GR R VVVLGD+GRSPRMQY ALSLA+ V ++ + SKPH +L+ I I
Sbjct: 29 GRTARHVIVVVLGDVGRSPRMQYHALSLAKS-GFSVTLLGFCNSKPHDELLQSDKIQIVG 87
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLW-FLCVKIASPDVFLVQNPPSVPTLVAV 119
+T + G Q LLW +C + A+ +FL QNPP +P +V
Sbjct: 88 LTDLQRLAVGPHVLQYGVKVV----FQAVHLLWKLMCTEPAAY-IFL-QNPPGLPAIVVC 141
Query: 120 KWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179
+A LR S +VDWHN+GY+++ L G V + + + EK G++++ LCVT
Sbjct: 142 WFAGCLRGSKLVVDWHNYGYSIMGLVHGPSHPLVLLAKWY-----EKLCGRLSHLNLCVT 196
Query: 180 QAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGM 239
AM+ +LA+NWGIKA +YD+P FF T L+ +H+LF +L+ P+ + C ++
Sbjct: 197 NAMRDDLAENWGIKAVTVYDKPASFFKETPLDLQHQLFVKLSHTY--PV-FRACSESSDP 253
Query: 240 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 293
+++ T +L+G L RPAL+VSSTSWT DEDF ILL A ++ +
Sbjct: 254 GTERSAFTERDALSGAVTHLC-GRPALLVSSTSWTEDEDFSILLAALEKFEHLI 306
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| UNIPROTKB|F1RKX2 LOC100524193 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 450 (163.5 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 113/303 (37%), Positives = 169/303 (55%)
Query: 2 GRRGR-ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
GR R VVVLGDLGRSPRMQY ALSLA+ V ++ + S+P +L+ I I +
Sbjct: 33 GRASRHVMVVVLGDLGRSPRMQYHALSLAKN-GFSVTLLGFCNSRPREELLQSDRIQIVS 91
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
+T+ P + G Q LLW L + + +FL QNPP +P +AV
Sbjct: 92 LTELPRLTVGPHILQYGVKVV----FQAVHLLWKLMCRDPAAYIFL-QNPPGLPA-IAVC 145
Query: 121 W-ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179
W A+ L S ++DWHN+GY+++ L G V + + + EK G++++ LCVT
Sbjct: 146 WFAACLCGSKLVIDWHNYGYSIMGLVHGPGHRLVLLAKWY-----EKLCGRLSHLNLCVT 200
Query: 180 QAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGM 239
AM+ +LA+NWGIKA +YD+P FF T L+ +H+LF +L++I + + S+ M
Sbjct: 201 NAMREDLAENWGIKAVTVYDKPASFFKETPLDLQHQLFMKLSRI-YSVFRARSEPSDLDM 259
Query: 240 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 299
E E + + + L RPAL+VSSTSWT DEDF +LL A +++ ++N+
Sbjct: 260 ERSAFTER--DAQSAVVTHLH-GRPALLVSSTSWTEDEDFSVLLAALEKFEQ----LIND 312
Query: 300 DDS 302
+S
Sbjct: 313 GES 315
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P16661 | ALG1_YEAST | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3340 | 0.8434 | 0.8997 | yes | no |
| Q9BT22 | ALG1_HUMAN | 2, ., 4, ., 1, ., 1, 4, 2 | 0.4184 | 0.8997 | 0.9288 | yes | no |
| Q6FLZ2 | ALG1_CANGA | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3298 | 0.8288 | 0.8822 | yes | no |
| Q75BA5 | ALG1_ASHGO | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3347 | 0.8183 | 0.8322 | yes | no |
| O13933 | ALG1_SCHPO | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3720 | 0.8162 | 0.9221 | yes | no |
| Q6BS98 | ALG1_DEBHA | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3291 | 0.8267 | 0.8389 | yes | no |
| P90522 | ALG1_DICDI | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3940 | 0.8413 | 0.8174 | yes | no |
| Q5R7A2 | ALG1_PONAB | 2, ., 4, ., 1, ., 1, 4, 2 | 0.4147 | 0.9060 | 0.9353 | yes | no |
| Q6CVU2 | ALG1_KLULA | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3282 | 0.8183 | 0.8769 | yes | no |
| Q6C3K2 | ALG1_YARLI | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3623 | 0.8350 | 0.8639 | yes | no |
| Q921Q3 | ALG1_MOUSE | 2, ., 4, ., 1, ., 1, 4, 2 | 0.4161 | 0.9060 | 0.9004 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.921 |
| 4th Layer | 2.4.1.142 | 0.914 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.01460030 | transferase, transferring glycosyl groups (EC-2.4.1.142) (481 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | estExt_fgenesh4_pg.C_LG_I2082 | hypothetical protein (233 aa) | • | • | 0.953 | ||||||
 | eugene3.00110811 | hypothetical protein (413 aa) | • | • | • | 0.950 | |||||
 | estExt_fgenesh4_pg.C_290241 | hypothetical protein (80 aa) | • | • | 0.931 | ||||||
 | fgenesh4_pg.C_scaffold_70000216 | hypothetical protein (179 aa) | • | • | 0.924 | ||||||
 | eugene3.00130240 | hypothetical protein (179 aa) | • | • | 0.921 | ||||||
 | fgenesh4_pm.C_LG_V000700 | dolichyl-phosphate beta-D-mannosyltransferase (EC-2.4.1.83) (238 aa) | • | • | 0.913 | ||||||
 | estExt_Genewise1_v1.C_LG_II0203 | dolichyl-phosphate beta-D-mannosyltransferase (EC-2.4.1.83) (240 aa) | • | • | 0.913 | ||||||
 | fgenesh4_pg.C_LG_II002473 | hypothetical protein (89 aa) | • | 0.899 | |||||||
 | grail3.0049024601 | hypothetical protein (361 aa) | • | • | • | 0.813 | |||||
 | estExt_fgenesh4_pg.C_LG_VI0713 | hypothetical protein (362 aa) | • | • | • | 0.813 | |||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 479 | |||
| PLN02275 | 371 | PLN02275, PLN02275, transferase, transferring glyc | 0.0 | |
| cd03816 | 415 | cd03816, GT1_ALG1_like, This family is most closel | 0.0 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 3e-12 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 3e-10 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 4e-10 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 8e-10 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 5e-09 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-08 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 5e-07 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 7e-07 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 3e-05 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 5e-05 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 3e-04 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 4e-04 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 4e-04 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 0.002 | |
| pfam13524 | 92 | pfam13524, Glyco_trans_1_2, Glycosyl transferases | 0.003 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 0.004 |
| >gnl|CDD|215155 PLN02275, PLN02275, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 687 bits (1774), Expect = 0.0
Identities = 293/432 (67%), Positives = 316/432 (73%), Gaps = 61/432 (14%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MGRRGRA VVVLGD GRSPRMQY ALSLARQ S +VDVVAYGGS+P A+L HPSIHIH
Sbjct: 1 MGRRGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHL 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + + LP+VL + LLLK IQF MLLWFLCVKI PDVFLVQNPPSVPTL VK
Sbjct: 61 MVQ-PRLLQRLPRVLYALALLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180
A LRR+ F++DWHNFGYTLL+LSLGR V +YR + E++YGKMA+G LCVT+
Sbjct: 120 LACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWY-----ERHYGKMADGHLCVTK 174
Query: 181 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 240
AMQHEL QNWGI+ATVLYDQPPEFF P SLE
Sbjct: 175 AMQHELDQNWGIRATVLYDQPPEFFRPASLE----------------------------- 205
Query: 241 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 300
+ L+PNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAA LNE
Sbjct: 206 ----------------IRLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNES 249
Query: 301 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAED 360
DS + GKQ LYPRLLFIITGKGP K YEEKI RL L+ VAFRTMWL AED
Sbjct: 250 DS----------ASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAED 299
Query: 361 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 420
YPLLLGSADLGV LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELVK KNGLLFSS
Sbjct: 300 YPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFSS 359
Query: 421 SSELADQLLMLF 432
SSELADQLL L
Sbjct: 360 SSELADQLLELL 371
|
Length = 371 |
| >gnl|CDD|99986 cd03816, GT1_ALG1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 563 bits (1454), Expect = 0.0
Identities = 227/469 (48%), Positives = 281/469 (59%), Gaps = 58/469 (12%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
R R CV+VLGD+GRSPRMQY ALSLA+ +VD+V Y + PH IL +P+I IH +
Sbjct: 3 RKRVCVLVLGDIGRSPRMQYHALSLAK-HGWKVDLVGYLETPPHDEILSNPNITIHPL-- 59
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
P P+ L K+ + LK L QFF LLW L K+ D L+QNPPS+PTL+
Sbjct: 60 -PPPPQRLNKLPFLLFAPLKVLWQFFSLLWLL-YKLRPADYILIQNPPSIPTLLIAWLYC 117
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQ 183
LRR+ I+DWHN+GYT+L+L LG V + + EK +G++A+ LCVT+AM+
Sbjct: 118 LLRRTKLIIDWHNYGYTILALKLGENHPLVRLAK-----WYEKLFGRLADYNLCVTKAMK 172
Query: 184 HELAQ--NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEG 241
+L Q NW I+ATVLYD+PPE F P LEEKHELF +L K
Sbjct: 173 EDLQQFNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAK------------------- 213
Query: 242 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 301
+ L V L RPAL+VSSTSWTPDEDFGILL+A + Y++ A
Sbjct: 214 ----TFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAA---TGPK 266
Query: 302 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 361
P+LL IITGKGP KE Y E+I+ L+LK+V RT WLSAEDY
Sbjct: 267 L------------------PKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDY 308
Query: 362 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSS 421
P LL SADLGV LHTSSSGLDLPMKVVDMFGCGLPVCA+ + CI+ELVK +NGL+F S
Sbjct: 309 PKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFGDS 368
Query: 422 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 470
ELA+QL+ L FP+ L L+ G E RW W+ PL
Sbjct: 369 EELAEQLIDLLSNFPNR-GKLNSLKKGAQEESEL-RWDENWDRVVGPLF 415
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. Length = 415 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 3e-12
Identities = 90/450 (20%), Positives = 156/450 (34%), Gaps = 101/450 (22%)
Query: 14 DLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPS------IHIHTMTQW-PT 66
G + R A L ++ EV V+ + P I + + +H P
Sbjct: 13 LGGGAFRTTELAEELVKR-GHEVTVITGSPNYPSGKIYKGYKREEVDGVRVH----RVPL 67
Query: 67 IPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR 126
P +LK +L L L L + PDV + +PP + +A + L+
Sbjct: 68 PPYKKNGLLKRLLNYLS---FALSALLALLKRRRRPDVIIATSPP-LLIALAALLLARLK 123
Query: 127 RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHEL 186
+ F+++ + + +++LG + +YR ++E+ + A+ + ++ M+ E
Sbjct: 124 GAPFVLEVRDL-WPESAVALGLLKNGSLLYRLLR--KLERLIYRRADAIVVISPGMR-EY 179
Query: 187 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADE 246
G+ KI P GV D
Sbjct: 180 LVRRGVPP--------------------------EKISVIPNGV--------------DL 199
Query: 247 TIFTSLAGIDVFLKPNRPA---LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 303
+F + K +V+ + + + LLEAA A+L +
Sbjct: 200 ELFKPPPADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAA--------ALLKD---- 247
Query: 304 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 363
P + F+I G GP+KE +E + L L V F + E+ P
Sbjct: 248 ----------------RPDIRFLIVGDGPEKEELKELAKALGLDNVTF-LGRVPKEELPE 290
Query: 364 LLGSADLGVC--LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS- 420
LL +AD+G+ + P K+ + G PV A ELV+ GL+
Sbjct: 291 LLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPG 350
Query: 421 -SSELADQLLMLFKGFPDDSDVLKKL-RNG 448
LA +L L DD + ++ NG
Sbjct: 351 DPEALAAAILELL----DDPEERAEMGENG 376
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-10
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 12/128 (9%)
Query: 306 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 365
L+E + P + I G GP++ + RL V F ED LL
Sbjct: 18 LWLLEEALPLLRKALPDVELHIIGSGPEE------LARL-APNVHFLGFV---EDLAALL 67
Query: 366 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 425
SAD+ + +G P+K+++ GLPV A + L+ E A
Sbjct: 68 ASADVALAPLRFGAGS--PLKLLEALAAGLPVVATDIGAEGLPEDLGWGVLVADDPEEFA 125
Query: 426 DQLLMLFK 433
+ ++ L
Sbjct: 126 EAIVRLLA 133
|
Length = 134 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 4e-10
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 318 YLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHT 376
P + +I G GP++E EE R L L RV F T ++ E+ P +ADL V
Sbjct: 229 KEEPDVKLVIVGDGPEREELEELARELGLADRVIF-TGFVPREELPDYYKAADLFV--FA 285
Query: 377 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE-LADQLLMLFKGF 435
S++ + +++ GLPV AV + +LV +NG LF E LA+ LL L +
Sbjct: 286 STTET-QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDEALAEALLRLLQDP 344
Query: 436 PDDSDVLKKLRNGTLEMGLSARWAT 460
+ K + + +
Sbjct: 345 ELRRRLSKNAEESAEKFSFAKKVEK 369
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 8e-10
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 320 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 378
P L +I G GP++E EE + L L RV F E LLL +AD V + S
Sbjct: 133 GPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAAD--VFVLPSL 190
Query: 379 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 418
+ V++ CGLPV A E+V+ GLL
Sbjct: 191 RE-GFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 57.7 bits (138), Expect = 5e-09
Identities = 81/431 (18%), Positives = 142/431 (32%), Gaps = 98/431 (22%)
Query: 47 HAAILEHPSIHIHTMTQWPTIPRGLPKV---LKPVLLLLKPLIQFFMLLWFLCVKIASPD 103
A L + + G+ + + LL+ L + L L ++ D
Sbjct: 26 KALRLLGRGHEVLVIAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLKRLLPYD 85
Query: 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLR 163
+ + P + L +V H +L L R + + R
Sbjct: 86 IIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLL---PRLLLLLGLLRLLLKR 142
Query: 164 IEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKI 223
++K +A+ + V+ A++ L NKI
Sbjct: 143 LKKALRLLADRVIAVSPALKELLEALGVP----------------------------NKI 174
Query: 224 LHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILL 283
+ P G+ D F + A I + + + ++ P++ +L+
Sbjct: 175 VVIPNGI--------------DTEKF-APARIGLLPEGGKFVVLYVGR-LDPEKGLDLLI 218
Query: 284 EAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEKIR 342
EAA +R P + +I G GP++ E E+ +
Sbjct: 219 EAAAKLKKR---------------------------GPDIKLVIVGDGPERREELEKLAK 251
Query: 343 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402
+L L+ ++ E+ LL SAD V + S S + +++ G PV A
Sbjct: 252 KLGLEDNVKFLGYVPDEELAELLASAD--VFVLPSLSE-GFGLVLLEAMAAGTPVIASDV 308
Query: 403 SCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT 460
I E+V+ + GLL ELAD L L + +LR E+G +AR
Sbjct: 309 GGIPEVVEDGETGLLVPPGDVEELADALEQLLE--------DPELRE---ELGEAARERV 357
Query: 461 E----WEEHAK 467
E WE A+
Sbjct: 358 EEEFSWERIAE 368
|
Length = 381 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 47/158 (29%), Positives = 68/158 (43%), Gaps = 28/158 (17%)
Query: 320 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 378
YP + +I G GP +E E L L RV F ++ ED P L +AD V + S
Sbjct: 228 YPDVRLVIVGDGPLREELEALAAELGLGDRVTF-LGFVPDEDLPALYAAAD--VFVLPSL 284
Query: 379 S-GLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLF--SSSSELADQLLMLFK 433
G + +++ GLPV V+ I E+V+ + GLL LA+ +L L
Sbjct: 285 YEG--FGLVLLEAMAAGLPV--VASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL- 339
Query: 434 GFPDDSDVLKKLRNGTLEMGLSAR-WATE---WEEHAK 467
DD + LR +G +AR E W+ A
Sbjct: 340 ---DDPE----LRR---RLGEAARERVAERFSWDRVAA 367
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 5e-07
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 16/153 (10%)
Query: 320 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 378
P + +I G GP +E+ E L L RV F + E+ P +AD+ L +
Sbjct: 231 RPDVHLVIVGDGPLREALEALAAELGLEDRVTF-LGAVPHEEVPAYYAAADV-FVLPSLR 288
Query: 379 SGLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLF--SSSSELADQLLMLFKG 434
G + +++ CGLPV V+ I E++ +NGLL LA+ +L L
Sbjct: 289 EG--FGLVLLEAMACGLPV--VATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL-- 342
Query: 435 FPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK 467
L+ R + W E +
Sbjct: 343 ---ADPWLRLGRAARRRVAERFSWENVAERLLE 372
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 7e-07
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 26/153 (16%)
Query: 320 YPRLLFIITGKG-PDKESYE----EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVC 373
+P + ++ G+ PD E Y RL L RV F +L E+ P L +AD+ V
Sbjct: 214 HPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADV-VV 272
Query: 374 L-----HTSSSGLDLPMKVVDM-FGCGLPVCAVSYSCIEELVKVDKNGLL--FSSSSELA 425
L + SG V+ G G PV + EE++ GLL + LA
Sbjct: 273 LPYRSADQTQSG------VLAYAIGFGKPVISTPVGHAEEVLD-GGTGLLVPPGDPAALA 325
Query: 426 DQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW 458
+ + L D ++ + LR E + W
Sbjct: 326 EAIRRLL----ADPELAQALRARAREYARAMSW 354
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 30/206 (14%), Positives = 59/206 (28%), Gaps = 36/206 (17%)
Query: 21 MQYQALSLARQMSL---EVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77
+ L LAR ++ EV V+ G + +
Sbjct: 16 AERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVR--------------PPPL 61
Query: 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137
+ + L+ L ++ DV + ++ L ++ H
Sbjct: 62 LRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAAR---LLGIPLVLTVHGL 118
Query: 138 GYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGI---KA 194
+ R +E+ + A+ + V++A + EL + G+ K
Sbjct: 119 EF--------GRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKI 170
Query: 195 TVLY---DQPPEFFHPTSLEEKHELF 217
TV+ D E F P + L
Sbjct: 171 TVIPNGVD--TERFRPAPRAARRRLG 194
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Query: 320 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 379
+P L +I G G +++ ++ +L L+ ++ ED L ADL V S
Sbjct: 31 HPNLKLVIVGDGEEEKKLKKLALKLGLEDNVIFVGFVPDEDLIELYRIADLFV--LPSRY 88
Query: 380 GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLLMLFK 433
+ +++ G+PV A E+VK + GLL LA+ + L K
Sbjct: 89 E-GFGLVLLEAMAAGVPVIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLLK 143
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 20/128 (15%)
Query: 325 FIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLD 382
I G GP++E+ E I+ L L RV + E+Y A + L TS G
Sbjct: 212 LRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEY---YAKASI-FVL-TSRFEG-- 264
Query: 383 LPMKVVDMFGCGLPVCAVSYSC---IEELVKVDKNGLLF--SSSSELADQLLMLFKGFPD 437
PM +++ GLPV +S+ C E+++ NGLL LA+ LL L +
Sbjct: 265 FPMVLLEAMAFGLPV--ISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLME---- 318
Query: 438 DSDVLKKL 445
D ++ K++
Sbjct: 319 DEELRKRM 326
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 4e-04
Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 28/147 (19%)
Query: 321 PRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLH--TS 377
RL+ I G GP + E R L L RV F + L+ A + T+
Sbjct: 220 VRLVII--GDGPLLAALEALARALGLGGRVTFLG-AQPHAEVRELMRRARI-FLQPSVTA 275
Query: 378 SSGLD---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLF 432
SG D LP+ +++ G+PV A + I E V+ + GLL + LA L L
Sbjct: 276 PSG-DAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRL- 333
Query: 433 KGFPDDSDVLKKLRNGTL--EMGLSAR 457
L + L MG + R
Sbjct: 334 ------------LADPDLRARMGAAGR 348
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Query: 321 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAE--DYPLLLGSADLGVCLHTSS 378
RL +I G GP + + E+ +R L + WL E D P L+ + DL V S
Sbjct: 228 ERLRLVIVGDGPARGACEQMVRAAGLAHLV----WLPGERDDVPALMQALDLFV---LPS 280
Query: 379 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLL 429
+ +++ GLPV A + ELV+ G L LA L
Sbjct: 281 LAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.002
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 327 ITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGV--CLHTSSSGLD- 382
I G GP ++ E I L L RV S E+ LL +ADL V + + +
Sbjct: 215 IVGDGPLRDELEALIAELGLEDRVTL-LGAKSQEEVRELLRAADLFVLPSVTAADGDREG 273
Query: 383 LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 417
LP+ +++ GLPV + S I ELV+ + GLL
Sbjct: 274 LPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLL 308
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 36.4 bits (85), Expect = 0.003
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 372 VCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQL 428
+ L+ S M+V + CG P+ +EEL + + +L+ ELA++L
Sbjct: 1 IVLNPSRRD-SPNMRVFEAAACGAPLLTDRTPGLEELFEPGEEIVLYRDPEELAEKL 56
|
Length = 92 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.004
Identities = 44/214 (20%), Positives = 67/214 (31%), Gaps = 29/214 (13%)
Query: 16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVL 75
G ++ A +LA++ +EV V+A G P L + L K
Sbjct: 15 GGGIFVKELARALAKR-GVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGP 73
Query: 76 KPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWH 135
LL + L++ L F PD+ + P A +V H
Sbjct: 74 LLYLLAARALLKLLKLKRF------RPDLIHAHF--AYPDGFAAALLKRKLGIPLVVTLH 125
Query: 136 NFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGI--K 193
LL R LR A+ + V++A+ EL K
Sbjct: 126 GSDVNLLPRKRLLR------ALLRRALRR-------ADAVIAVSEALADELKALGIDPEK 172
Query: 194 ATVLY---DQPPEFFHPTSLEEKHELFCRLNKIL 224
TV+ D E F P E +L +K +
Sbjct: 173 VTVIPNGVD--TERFSPADRAEARKLGLPEDKKV 204
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 479 | |||
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.98 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.97 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.97 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.97 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.97 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.96 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.95 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.94 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.94 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.94 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.94 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.94 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.92 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.9 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.89 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.89 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.89 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.88 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.87 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.86 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.85 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.85 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.85 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.84 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.84 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.82 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.8 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.8 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.78 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.77 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.73 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.72 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.7 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.62 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.56 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.48 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.43 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.41 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.41 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.4 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.32 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.28 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.22 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 99.21 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 99.18 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.13 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.13 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.11 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.01 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.99 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.94 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.88 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.85 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.82 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.78 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.74 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.53 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.52 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.48 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 98.44 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.43 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 98.4 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 98.4 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.35 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 98.32 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.3 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 98.26 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.21 | |
| PLN02208 | 442 | glycosyltransferase family protein | 98.16 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.15 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 98.1 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 98.03 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 97.97 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.88 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.78 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 97.77 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 97.61 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 97.44 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 97.41 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 97.38 | |
| PLN00414 | 446 | glycosyltransferase family protein | 97.35 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 97.33 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.15 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 97.11 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.08 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 97.06 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 97.06 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.06 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 96.91 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 96.9 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 96.69 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 96.61 | |
| PLN02764 | 453 | glycosyltransferase family protein | 96.52 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 96.45 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 96.43 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 96.41 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 96.11 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 95.85 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 95.65 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 95.65 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 95.6 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 95.59 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.56 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 95.48 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 95.38 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 95.37 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 95.3 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 94.89 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 94.81 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 94.68 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 94.62 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 94.39 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 94.33 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 93.96 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 93.83 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 93.77 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 93.43 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 92.4 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 92.39 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 92.11 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 92.02 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 91.98 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 91.84 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 91.66 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 91.27 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 91.19 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 90.94 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 90.52 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 90.14 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 89.92 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 87.65 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 85.97 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 84.05 | |
| KOG1021 | 464 | consensus Acetylglucosaminyltransferase EXT1/exost | 84.04 | |
| PF03016 | 302 | Exostosin: Exostosin family; InterPro: IPR004263 H | 83.02 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 82.16 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 81.85 |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-69 Score=527.21 Aligned_cols=431 Identities=54% Similarity=0.902 Sum_probs=385.4
Q ss_pred CCCcceEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHH
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~ 80 (479)
|++++++||||+||+||||||+|||.+||++ |++|+++++.++.+...+..+++|+||.++..+ .....++.+..
T Consensus 9 ~~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~-gf~VdliGy~~s~p~e~l~~hprI~ih~m~~l~----~~~~~p~~~~l 83 (444)
T KOG2941|consen 9 KSKKKRAIVVVLGDVGRSPRMQYHALSLAKL-GFQVDLIGYVESIPLEELLNHPRIRIHGMPNLP----FLQGGPRVLFL 83 (444)
T ss_pred ccccceEEEEEecccCCChHHHHHHHHHHHc-CCeEEEEEecCCCChHHHhcCCceEEEeCCCCc----ccCCCchhhhh
Confidence 4678999999999999999999999999997 999999999999888888899999999999432 23333455668
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhh-hhhhhcCCCchhHHHHHHH
Q 011690 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYT-LLSLSLGRRSHFVSIYRCF 159 (479)
Q Consensus 81 l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~-~~~~~~~~~~~~~~~~~~~ 159 (479)
..+.+.|+..++|.++. ...+|+|+++|||++++++++.++...+|+++++|||+++|+ .+.++.+..++++++.+++
T Consensus 84 ~lKvf~Qfl~Ll~aL~~-~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~ 162 (444)
T KOG2941|consen 84 PLKVFWQFLSLLWALFV-LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWL 162 (444)
T ss_pred HHHHHHHHHHHHHHHHh-ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHH
Confidence 88999999999999988 589999999999999999999999999999999999999998 6778888899999999999
Q ss_pred hHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCC-eEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccc
Q 011690 160 SVLRIEKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG 238 (479)
Q Consensus 160 ~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~-~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (479)
|+++.+.||..+|||++|++.+.++||+ ++.|+|+.|++ +|++.+++++++.+++....++. + -.
T Consensus 163 -----E~~fgk~a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps--~~~~l~~~H~lf~~l~~d~~~f~------a-r~ 228 (444)
T KOG2941|consen 163 -----EKYFGKLADYNLCVTKAMREDLIQNWGINRAKVLYDRPPS--KPTPLDEQHELFMKLAGDHSPFR------A-RE 228 (444)
T ss_pred -----HHHhhcccccchhhHHHHHHHHHHhcCCceeEEEecCCCC--CCCchhHHHHHHhhhccccchhh------h-cc
Confidence 9999999999999999999999999997 69999999776 78888899999998875432210 0 02
Q ss_pred cCCcccccchhcccc-ccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcc
Q 011690 239 MEGQKADETIFTSLA-GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 317 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (479)
.+++...++.|+... .+.+...+.+|.+++++++|+|++++..|++|+..+.+.. ..++
T Consensus 229 ~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~--------------------~~~~ 288 (444)
T KOG2941|consen 229 PQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQL--------------------YDKT 288 (444)
T ss_pred cccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhh--------------------hhcc
Confidence 334444467786653 3778888999999999999999999999999999876542 1235
Q ss_pred cCCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcE
Q 011690 318 YLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 397 (479)
Q Consensus 318 ~~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PV 397 (479)
...|++..+|+|+||.+|.|.+.++++++++|.+..+|++.||++.++++||++||.|++|+|.++|||+++++.||+||
T Consensus 289 ~~lP~llciITGKGPlkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPv 368 (444)
T KOG2941|consen 289 HNLPSLLCIITGKGPLKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 368 (444)
T ss_pred CCCCcEEEEEcCCCchhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCce
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCccchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHH
Q 011690 398 CAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE 472 (479)
Q Consensus 398 Ias~~~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 472 (479)
||.+..|+.|++++++||++|+|.++||++|..++++||++.+.+++++.|+++ .+..+|+++|++++.|+++.
T Consensus 369 cA~~fkcl~ELVkh~eNGlvF~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e-~~e~RW~~~W~~~~~P~~~~ 442 (444)
T KOG2941|consen 369 CAVNFKCLDELVKHGENGLVFEDSEELAEQLQMLFKNFPDNADELNQLKKNLRE-EQELRWDESWERTALPLVMD 442 (444)
T ss_pred eeecchhHHHHHhcCCCceEeccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHH-HHhhhHHHHHHHhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999999999 46999999999999998764
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-49 Score=418.44 Aligned_cols=412 Identities=54% Similarity=0.915 Sum_probs=314.7
Q ss_pred CCcceEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHH
Q 011690 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLL 81 (479)
Q Consensus 2 ~~~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l 81 (479)
.++||+|+++.+++|...|+.+++..|+++ ||+|+|++.....+..+.....||+++.++ ..+ .......+.+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~R~~~~a~~L~~~-G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~~~~~~~~~~~~ 76 (415)
T cd03816 1 PKRKRVCVLVLGDIGRSPRMQYHALSLAKH-GWKVDLVGYLETPPHDEILSNPNITIHPLP--PPP-QRLNKLPFLLFAP 76 (415)
T ss_pred CCccEEEEEEecccCCCHHHHHHHHHHHhc-CceEEEEEecCCCCCHHHhcCCCEEEEECC--CCc-cccccchHHHHHH
Confidence 368999999999999999999999999996 999999998765444333456789999998 322 1122233444454
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhH
Q 011690 82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSV 161 (479)
Q Consensus 82 ~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (479)
...+.+++.+++.++.+ .+||+||+|+|+.+++..++.++++..++|+|++||++.++......+..+.+.++++++
T Consensus 77 ~~~~~~~~~~~~~l~~~-~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~-- 153 (415)
T cd03816 77 LKVLWQFFSLLWLLYKL-RPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWY-- 153 (415)
T ss_pred HHHHHHHHHHHHHHHhc-CCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcccCCCCHHHHHHHHH--
Confidence 55555556666655543 689999999988888887888888888999999999976544443333344445566666
Q ss_pred HHHHHHHhhcCCEEEEeCHHHHHHHHHhhCC---eEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccc
Q 011690 162 LRIEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG 238 (479)
Q Consensus 162 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (479)
|+.+++.||.++++|+.+++.+.+ ++. ++.+|||++...|.|.+.......+......
T Consensus 154 ---e~~~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~~~~f~p~~~~~~~~~~~~~~~~--------------- 214 (415)
T cd03816 154 ---EKLFGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAKT--------------- 214 (415)
T ss_pred ---HHHHhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCCHHHceeCcHHHHHHHHHhcccc---------------
Confidence 999999999999999999999877 454 3899999976677776532222111100000
Q ss_pred cCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCccc
Q 011690 239 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 318 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (479)
........+..+..++++.+++++||+.+.||++.||+|+..+.+...+ ..
T Consensus 215 --------~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~---------------------~~ 265 (415)
T cd03816 215 --------FLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAAT---------------------GP 265 (415)
T ss_pred --------ccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcc---------------------cc
Confidence 0000000011123345566888999999999999999999998752000 01
Q ss_pred CCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEE
Q 011690 319 LYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 398 (479)
Q Consensus 319 ~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVI 398 (479)
..|+++|+|+|+|+.++.+++.+++++++++.|.+.|++.++++.+|++||++++|+.++.++++|++++||||||+|||
T Consensus 266 ~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI 345 (415)
T cd03816 266 KLPKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVC 345 (415)
T ss_pred cCCCEEEEEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEE
Confidence 25789999999999999999999999998877775459999999999999999987666677899999999999999999
Q ss_pred EecCccchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHH
Q 011690 399 AVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 470 (479)
Q Consensus 399 as~~~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 470 (479)
+|+.++.+|+++++.+|++++|++++|++|.+++++.+ +++.+++|++++++. ...+|+.+|++++-|++
T Consensus 346 ~s~~~~~~eiv~~~~~G~lv~d~~~la~~i~~ll~~~~-~~~~~~~m~~~~~~~-~~~~~~~~~~~~~~~~~ 415 (415)
T cd03816 346 ALDFKCIDELVKHGENGLVFGDSEELAEQLIDLLSNFP-NRGKLNSLKKGAQEE-SELRWDENWDRVVGPLF 415 (415)
T ss_pred EeCCCCHHHHhcCCCCEEEECCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHh-hhcCHHHHHHHHhhhhC
Confidence 99999999999999999999999999999999999310 188999999999994 48999999999998863
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-47 Score=394.04 Aligned_cols=370 Identities=79% Similarity=1.254 Sum_probs=288.5
Q ss_pred CCCcceEEEEEecCCCCChhHHHHHHHHHhhCCC-cEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHH
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSL-EVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVL 79 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~La~~~G~-eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~ 79 (479)
|+++++++|++++++|..+||+.++..++++ |+ +|+|+|+.+..+..+.....|+++++++. +......+.....+.
T Consensus 1 ~~~~~~~~~~~~~~~g~~~r~~~~~~~l~~~-~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~-~~~~~~~~~~~~~~~ 78 (371)
T PLN02275 1 MGRRGRAAVVVLGDFGRSPRMQYHALSLARQ-ASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQ-PRLLQRLPRVLYALA 78 (371)
T ss_pred CCCccEEEEEEecCCCCCHHHHHHHHHHHhc-CCceEEEEEecCCCCCHHHhcCCcEEEEECCC-cccccccccchHHHH
Confidence 8999999999999999999999999999997 65 89999987765554555667899999983 111112333333333
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHH
Q 011690 80 LLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCF 159 (479)
Q Consensus 80 ~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~ 159 (479)
++....+.+..++|.+..+..+||+||+|+|+.+....++.++++..+.|+|+++|++.+..............++.+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 158 (371)
T PLN02275 79 LLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWY 158 (371)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHH
Confidence 45555556666777665556899999999988777777788888888999999999975443333322334445566666
Q ss_pred hHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCCeEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCcccccccccc
Q 011690 160 SVLRIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGM 239 (479)
Q Consensus 160 ~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (479)
|+.+++.+|.++++|+.+++.+.+.++.++.+|||++.+.|.|.... ..
T Consensus 159 -----e~~~~~~ad~ii~~S~~~~~~l~~~~g~~i~vi~n~~~~~f~~~~~~--~~------------------------ 207 (371)
T PLN02275 159 -----ERHYGKMADGHLCVTKAMQHELDQNWGIRATVLYDQPPEFFRPASLE--IR------------------------ 207 (371)
T ss_pred -----HHHHHhhCCEEEECCHHHHHHHHHhcCCCeEEECCCCHHHcCcCCch--hc------------------------
Confidence 99999999999999999999998877888889999965666654321 00
Q ss_pred CCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccC
Q 011690 240 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 319 (479)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (479)
..++.+.+++++||+.++||++.+++|+..+..++....+.++ +.+.....
T Consensus 208 -------------------~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~----------~~~~~~~~ 258 (371)
T PLN02275 208 -------------------LRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESD----------SASGKQSL 258 (371)
T ss_pred -------------------ccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhcccccc----------cccccccc
Confidence 1123445788999999999999999999988654332212111 00011123
Q ss_pred CCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEE
Q 011690 320 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 399 (479)
Q Consensus 320 ~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIa 399 (479)
.|+++|+|+|+|+.+++++++++++++++|.|.+.|++.++++.+|++||++|+|+.++.++++|++++||||||+|||+
T Consensus 259 ~~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa 338 (371)
T PLN02275 259 YPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCA 338 (371)
T ss_pred CCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEE
Confidence 68899999999999999999999999988998876699999999999999999876555678999999999999999999
Q ss_pred ecCccchhccccCccEEEeCCHHHHHHHHHHHH
Q 011690 400 VSYSCIEELVKVDKNGLLFSSSSELADQLLMLF 432 (479)
Q Consensus 400 s~~~~~~e~i~~~~~G~l~~~~~~la~~l~~l~ 432 (479)
++.|+.+|+++++.+|++++++++||++|.+|+
T Consensus 339 ~~~gg~~eiv~~g~~G~lv~~~~~la~~i~~l~ 371 (371)
T PLN02275 339 VSYSCIGELVKDGKNGLLFSSSSELADQLLELL 371 (371)
T ss_pred ecCCChHHHccCCCCeEEECCHHHHHHHHHHhC
Confidence 999999999999999999999999999998874
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=329.59 Aligned_cols=380 Identities=17% Similarity=0.188 Sum_probs=262.3
Q ss_pred EEEEE---ecCCCCC-hhHHHHHHHHHhhCCCcEEEEecCCCCCc-----------ccccCCCCeEEEEeecCCCCCCCC
Q 011690 7 ACVVV---LGDLGRS-PRMQYQALSLARQMSLEVDVVAYGGSKPH-----------AAILEHPSIHIHTMTQWPTIPRGL 71 (479)
Q Consensus 7 ~~i~~---~~~~g~~-~r~~~~a~~La~~~G~eV~Vv~~~~~~~~-----------~~~~~~~gi~i~~~~~~~~~~~~~ 71 (479)
++++. .++.|+. .++...+..|+++ ||+|+|+|..+..+. ......+|+++++++.+. ....
T Consensus 3 Ilii~~~~~P~~~g~~~~~~~l~~~L~~~-G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~--~~~~ 79 (412)
T PRK10307 3 ILVYGINYAPELTGIGKYTGEMAEWLAAR-GHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYV--PKQP 79 (412)
T ss_pred EEEEecCCCCCccchhhhHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccC--CCCc
Confidence 45554 3444432 3455667888885 999999997643211 011224689999998321 1111
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhh-cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhh-hhhhcCCC
Q 011690 72 PKVLKPVLLLLKPLIQFFMLLWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTL-LSLSLGRR 149 (479)
Q Consensus 72 ~~~~~~~~~l~~~l~~~~~~~~~l~~~-~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~-~~~~~~~~ 149 (479)
... ..+.....-.+..+..+... ..+||+||+|+|+.. ....+.++++..++|+|++.|++.... ......+.
T Consensus 80 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~-~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~ 154 (412)
T PRK10307 80 SGL----KRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLF-CAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKG 154 (412)
T ss_pred cHH----HHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHH-HHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccC
Confidence 111 11111111111111111111 268999999996533 334556677788999999999865322 11111112
Q ss_pred chhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCC---eEEEecCC-CCCCCCCCChHHHHHHHHhhhhccc
Q 011690 150 SHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILH 225 (479)
Q Consensus 150 ~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~ 225 (479)
+.+.++.+++ |+++++.||.++++|+.+++.+.+. +. ++.+|||| +.+.|.+........+...
T Consensus 155 ~~~~~~~~~~-----~~~~~~~ad~ii~~S~~~~~~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~------ 222 (412)
T PRK10307 155 GKVARLATAF-----ERSLLRRFDNVSTISRSMMNKAREK-GVAAEKVIFFPNWSEVARFQPVADADVDALRAQ------ 222 (412)
T ss_pred cHHHHHHHHH-----HHHHHhhCCEEEecCHHHHHHHHHc-CCCcccEEEECCCcCHhhcCCCCccchHHHHHH------
Confidence 2333344444 8888899999999999999988765 54 38899999 7666765432111222222
Q ss_pred CCCCccccccccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchh
Q 011690 226 QPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE 305 (479)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~ 305 (479)
+++++++ .+++|+|++.+.||++.|++|++.+.+
T Consensus 223 -------------------------------~~~~~~~-~~i~~~G~l~~~kg~~~li~a~~~l~~-------------- 256 (412)
T PRK10307 223 -------------------------------LGLPDGK-KIVLYSGNIGEKQGLELVIDAARRLRD-------------- 256 (412)
T ss_pred -------------------------------cCCCCCC-EEEEEcCccccccCHHHHHHHHHHhcc--------------
Confidence 2333333 589999999999999999999998743
Q ss_pred hhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCC-CCCCCc
Q 011690 306 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLP 384 (479)
Q Consensus 306 ~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-~~e~~p 384 (479)
.|+++|+|+|+|+..+.+++.++++++++|.|+|. ++.++++.+|++||++++|+... .+..+|
T Consensus 257 --------------~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~-~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p 321 (412)
T PRK10307 257 --------------RPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPL-QPYDRLPALLKMADCHLLPQKAGAADLVLP 321 (412)
T ss_pred --------------CCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCC-CCHHHHHHHHHhcCEeEEeeccCcccccCc
Confidence 57899999999999999999999999988999996 99999999999999999995433 223379
Q ss_pred HHHHHHHhCCCcEEEecCcc--chhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchH
Q 011690 385 MKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWA 459 (479)
Q Consensus 385 ~~llEama~G~PVIas~~~~--~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~ 459 (479)
.+++|||+||+|||+|+.++ ..|+++ .+|+++ +|+++|+++|.++++ +++.++.|++++++.. ..++|+
T Consensus 322 ~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~----~~~~~~~~~~~a~~~~~~~fs~~ 395 (412)
T PRK10307 322 SKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALAR----QALLRPKLGTVAREYAERTLDKE 395 (412)
T ss_pred HHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHcCHH
Confidence 99999999999999999776 468886 589998 579999999999998 5889999999998854 467887
Q ss_pred HHHHHHHHHHHHHHH
Q 011690 460 TEWEEHAKPLITEVI 474 (479)
Q Consensus 460 ~~~~~~~~~~~~~~~ 474 (479)
...++ +..++.+++
T Consensus 396 ~~~~~-~~~~~~~~~ 409 (412)
T PRK10307 396 NVLRQ-FIADIRGLV 409 (412)
T ss_pred HHHHH-HHHHHHHHh
Confidence 76654 444444443
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=330.17 Aligned_cols=347 Identities=19% Similarity=0.245 Sum_probs=247.9
Q ss_pred hHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHH---HHHHHHHHHHHHHHHHHHH
Q 011690 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKP---VLLLLKPLIQFFMLLWFLC 96 (479)
Q Consensus 20 r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~---~~~l~~~l~~~~~~~~~l~ 96 (479)
++...+..|.++ ||+|+|+|.....+. ...++++..++....+. ....... ...+.+.+.+
T Consensus 79 ~~~~l~~~L~~~-G~eV~vlt~~~~~~~----~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~l~~~i~~--------- 142 (465)
T PLN02871 79 RFQNFIRYLREM-GDEVLVVTTDEGVPQ----EFHGAKVIGSWSFPCPF--YQKVPLSLALSPRIISEVAR--------- 142 (465)
T ss_pred HHHHHHHHHHHC-CCeEEEEecCCCCCc----cccCceeeccCCcCCcc--CCCceeeccCCHHHHHHHHh---------
Confidence 444556666664 999999997654321 22466665544211111 1110000 0112222222
Q ss_pred hhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEE
Q 011690 97 VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCL 176 (479)
Q Consensus 97 ~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi 176 (479)
.+||+||+|+|.. ..+.+.++++..++|+|+++|+....... .. ....+.+.... +++.+.+.+|.++
T Consensus 143 ---~kpDiIh~~~~~~--~~~~~~~~ak~~~ip~V~~~h~~~~~~~~-~~-~~~~~~~~~~~-----~~r~~~~~ad~ii 210 (465)
T PLN02871 143 ---FKPDLIHASSPGI--MVFGALFYAKLLCVPLVMSYHTHVPVYIP-RY-TFSWLVKPMWD-----IIRFLHRAADLTL 210 (465)
T ss_pred ---CCCCEEEECCCch--hHHHHHHHHHHhCCCEEEEEecCchhhhh-cc-cchhhHHHHHH-----HHHHHHhhCCEEE
Confidence 7999999998632 23344455667899999999975421111 00 01111111122 3677788999999
Q ss_pred EeCHHHHHHHHHhhC---CeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccc
Q 011690 177 CVTQAMQHELAQNWG---IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSL 252 (479)
Q Consensus 177 ~vS~~~~~~l~~~~~---~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (479)
++|+.+++.+.+... .++.++||| |.+.|.|.... .....++.
T Consensus 211 ~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~--~~~~~~~~------------------------------- 257 (465)
T PLN02871 211 VTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRS--EEMRARLS------------------------------- 257 (465)
T ss_pred ECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCcccc--HHHHHHhc-------------------------------
Confidence 999999999887642 238899999 77788765321 11111111
Q ss_pred cccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC
Q 011690 253 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 332 (479)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~ 332 (479)
...+++ .+|+++||+.+.||++.++++++. .|+++|+|+|+|+
T Consensus 258 -----~~~~~~-~~i~~vGrl~~~K~~~~li~a~~~-------------------------------~~~~~l~ivG~G~ 300 (465)
T PLN02871 258 -----GGEPEK-PLIVYVGRLGAEKNLDFLKRVMER-------------------------------LPGARLAFVGDGP 300 (465)
T ss_pred -----CCCCCC-eEEEEeCCCchhhhHHHHHHHHHh-------------------------------CCCcEEEEEeCCh
Confidence 012334 478999999999999999998865 4689999999999
Q ss_pred ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhcccc-
Q 011690 333 DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV- 411 (479)
Q Consensus 333 ~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~- 411 (479)
+.+.+++.+++ .+|.|+|+ ++.++++.+|++||++|+| |..|++|++++|||+||+|||+++.+++.|++++
T Consensus 301 ~~~~l~~~~~~---~~V~f~G~-v~~~ev~~~~~~aDv~V~p---S~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~ 373 (465)
T PLN02871 301 YREELEKMFAG---TPTVFTGM-LQGDELSQAYASGDVFVMP---SESETLGFVVLEAMASGVPVVAARAGGIPDIIPPD 373 (465)
T ss_pred HHHHHHHHhcc---CCeEEecc-CCHHHHHHHHHHCCEEEEC---CcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcC
Confidence 98888887764 36999997 9999999999999999998 5668899999999999999999999999999999
Q ss_pred --CccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHh
Q 011690 412 --DKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 412 --~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 475 (479)
+.+|+++ +|+++++++|.++++ +++.++.|++++++....++|+...++..+..+.+++.
T Consensus 374 ~~~~~G~lv~~~d~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~ 437 (465)
T PLN02871 374 QEGKTGFLYTPGDVDDCVEKLETLLA----DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIW 437 (465)
T ss_pred CCCCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999 579999999999999 58999999999988777888888877766666666654
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=319.65 Aligned_cols=360 Identities=18% Similarity=0.155 Sum_probs=255.1
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCc-ccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhh-c
Q 011690 22 QYQALSLARQMSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK-I 99 (479)
Q Consensus 22 ~~~a~~La~~~G~eV~Vv~~~~~~~~-~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~-~ 99 (479)
...+..|++ +||+|+|+|....... ......+|+++++++. .+...... ......+..+.. .+++.++.+ .
T Consensus 27 ~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~ 99 (405)
T TIGR03449 27 LETATELAR-RGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVA--GPYEGLDK-EDLPTQLCAFTG---GVLRAEARHEP 99 (405)
T ss_pred HHHHHHHhh-CCCEEEEEecccCCCCCCccccCCCcEEEEecC--CCcccCCH-HHHHHHHHHHHH---HHHHHHhhccC
Confidence 344555666 5999999997643221 1222357899999872 21111111 011111111111 112222222 2
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCC-CchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+||+|. ....+++.++++..++|+|+++|+... +....... ..+.....++. |+.+.+.+|.++++
T Consensus 100 ~~~Diih~h~---~~~~~~~~~~~~~~~~p~v~t~h~~~~-~~~~~~~~~~~~~~~~~~~~-----e~~~~~~~d~vi~~ 170 (405)
T TIGR03449 100 GYYDLIHSHY---WLSGQVGWLLRDRWGVPLVHTAHTLAA-VKNAALADGDTPEPEARRIG-----EQQLVDNADRLIAN 170 (405)
T ss_pred CCCCeEEech---HHHHHHHHHHHHhcCCCEEEeccchHH-HHHHhccCCCCCchHHHHHH-----HHHHHHhcCeEEEC
Confidence 4799999998 444556667777889999999998642 11100000 01111122233 77778899999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
|+...+.+.+.++.+ +.+|||| +.+.|.+.+.. ....
T Consensus 171 s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~---~~~~------------------------------------ 211 (405)
T TIGR03449 171 TDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRA---TERA------------------------------------ 211 (405)
T ss_pred CHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHH---HHHH------------------------------------
Confidence 999888888777653 8899999 76677654311 1111
Q ss_pred cccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCC--EEEEEEec--
Q 011690 255 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR--LLFIITGK-- 330 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~l~IvG~-- 330 (479)
++++++++ .+|+++|++.+.||++.+++|+..+.++ .|+ ++|+|+|+
T Consensus 212 -~~~~~~~~-~~i~~~G~l~~~K~~~~li~a~~~l~~~---------------------------~~~~~~~l~ivG~~~ 262 (405)
T TIGR03449 212 -RLGLPLDT-KVVAFVGRIQPLKAPDVLLRAVAELLDR---------------------------DPDRNLRVIVVGGPS 262 (405)
T ss_pred -hcCCCCCC-cEEEEecCCCcccCHHHHHHHHHHHHhh---------------------------CCCcceEEEEEeCCC
Confidence 12333444 4899999999999999999999998764 565 99999995
Q ss_pred --C-CChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccch
Q 011690 331 --G-PDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 406 (479)
Q Consensus 331 --G-~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~ 406 (479)
| +..+.+++.++++++ ++|.|+|. ++.+++..+|+.||++++| |..|++|++++|||+||+|||+++.++.+
T Consensus 263 ~~g~~~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~l~~ad~~v~p---s~~E~~g~~~lEAma~G~Pvi~~~~~~~~ 338 (405)
T TIGR03449 263 GSGLATPDALIELAAELGIADRVRFLPP-RPPEELVHVYRAADVVAVP---SYNESFGLVAMEAQACGTPVVAARVGGLP 338 (405)
T ss_pred CCcchHHHHHHHHHHHcCCCceEEECCC-CCHHHHHHHHHhCCEEEEC---CCCCCcChHHHHHHHcCCCEEEecCCCcH
Confidence 4 556789999999998 68999997 9999999999999999998 56788999999999999999999999999
Q ss_pred hccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHH
Q 011690 407 ELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 474 (479)
Q Consensus 407 e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 474 (479)
|++.++.+|+++ .|+++++++|.++++ +++.++++++++++....++|+..-++ ...++++++
T Consensus 339 e~i~~~~~g~~~~~~d~~~la~~i~~~l~----~~~~~~~~~~~~~~~~~~fsw~~~~~~-~~~~y~~~~ 403 (405)
T TIGR03449 339 VAVADGETGLLVDGHDPADWADALARLLD----DPRTRIRMGAAAVEHAAGFSWAATADG-LLSSYRDAL 403 (405)
T ss_pred hhhccCCceEECCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHh
Confidence 999999999999 479999999999998 588899999998886667788766654 345555543
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=319.29 Aligned_cols=344 Identities=13% Similarity=0.100 Sum_probs=242.2
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCC-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011690 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIP-RGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI 99 (479)
Q Consensus 21 ~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~ 99 (479)
+...+..|+++ ||+|+|+|..............+++++++|...... .........+..+.+.+. .
T Consensus 20 ~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~~l~~~~~------------~ 86 (398)
T cd03796 20 IYQLSQCLIKR-GHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFPLLRNILI------------R 86 (398)
T ss_pred HHHHHHHHHHc-CCeeEEEeccCCcCCCcccccCceeEEEecceeccCCccccchhhhHHHHHHHHH------------h
Confidence 34456677775 999999997643222122335689999988321110 001111111111222221 2
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+|++... ....+.++++..++|+|++.|+... . .........++ .++..+.+|.++++|
T Consensus 87 ~~~DiIh~~~~~~~-~~~~~~~~~~~~~~~~v~t~h~~~~-~-------~~~~~~~~~~~-----~~~~~~~~d~ii~~s 152 (398)
T cd03796 87 ERITIVHGHQAFSA-LAHEALLHARTMGLKTVFTDHSLFG-F-------ADASSIHTNKL-----LRFSLADVDHVICVS 152 (398)
T ss_pred cCCCEEEECCCCch-HHHHHHHHhhhcCCcEEEEeccccc-c-------cchhhHHhhHH-----HHHhhccCCEEEEec
Confidence 79999999995432 2233455667788999999998531 0 00001112223 566678899999999
Q ss_pred HHHHHHHHHhhCC---eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccc
Q 011690 180 QAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 255 (479)
Q Consensus 180 ~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (479)
+.+.+.+....+. ++.+|||| |.+.|.+....
T Consensus 153 ~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~-------------------------------------------- 188 (398)
T cd03796 153 HTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK-------------------------------------------- 188 (398)
T ss_pred HhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc--------------------------------------------
Confidence 9998865444344 28899999 65566554310
Q ss_pred ccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChH
Q 011690 256 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 335 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~ 335 (479)
. +++..+++++||+.+.||++.+++|++.+.++ .|+++|+|+|+|+..+
T Consensus 189 ---~-~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~ 237 (398)
T cd03796 189 ---R-DNDKITIVVISRLVYRKGIDLLVGIIPEICKK---------------------------HPNVRFIIGGDGPKRI 237 (398)
T ss_pred ---C-CCCceEEEEEeccchhcCHHHHHHHHHHHHhh---------------------------CCCEEEEEEeCCchHH
Confidence 0 12235899999999999999999999998765 7899999999999999
Q ss_pred HHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCcc
Q 011690 336 SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 414 (479)
Q Consensus 336 ~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~ 414 (479)
.+++.++++++ ++|.|+|. ++.+++..+|++||++++| |..|++|++++|||+||+|||+|+.++.+|++.++..
T Consensus 238 ~l~~~~~~~~l~~~v~~~G~-~~~~~~~~~l~~ad~~v~p---S~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~ 313 (398)
T cd03796 238 LLEEMREKYNLQDRVELLGA-VPHERVRDVLVQGHIFLNT---SLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMI 313 (398)
T ss_pred HHHHHHHHhCCCCeEEEeCC-CCHHHHHHHHHhCCEEEeC---ChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCce
Confidence 99999999999 67999996 9999999999999999998 5668999999999999999999999999999987654
Q ss_pred EEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hhhhhchHHHHHHHHHHHHHHHHh
Q 011690 415 GLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE-MGLSARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 415 G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~ 475 (479)
++...|+++++++|.+++++ ......++.++++ ....++|+...++ ...+++++++
T Consensus 314 ~~~~~~~~~l~~~l~~~l~~----~~~~~~~~~~~~~~~~~~fs~~~~~~~-~~~~y~~l~~ 370 (398)
T cd03796 314 LLAEPDVESIVRKLEEAISI----LRTGKHDPWSFHNRVKKMYSWEDVAKR-TEKVYDRILQ 370 (398)
T ss_pred eecCCCHHHHHHHHHHHHhC----hhhhhhHHHHHHHHHHhhCCHHHHHHH-HHHHHHHHhc
Confidence 44447899999999999985 3333334333333 2357888888765 4466666664
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=310.49 Aligned_cols=362 Identities=18% Similarity=0.179 Sum_probs=253.5
Q ss_pred cceEEEEEecCCCCChhHHHH-HHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHH
Q 011690 4 RGRACVVVLGDLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLL 82 (479)
Q Consensus 4 ~~~~~i~~~~~~g~~~r~~~~-a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~ 82 (479)
+++++|+...+.|+..++... +..|.+ .||+++|++..+...........|+++++++ ..+. .....+..+.
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~-~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~--~~~~----~~~~~~~~l~ 74 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPA-DRYRHAVVALTEVSAFRKRIQRPDVAFYALH--KQPG----KDVAVYPQLY 74 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhccc-cccceEEEEcCCCChhHHHHHhcCceEEEeC--CCCC----CChHHHHHHH
Confidence 567777777666554443332 333334 4899999986543333233345688998887 2111 1122223333
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcE-EEEecCchhhhhhhhcCCCchhHHHHHHHhH
Q 011690 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRCFSV 161 (479)
Q Consensus 83 ~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~-ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (479)
+.+.+ .+||+||+|++. . ..+.++++..++|. +.+.|.... .. .......+.++
T Consensus 75 ~~l~~------------~~~Divh~~~~~---~-~~~~~~~~~~~~~~~i~~~h~~~~--~~-----~~~~~~~~~~~-- 129 (374)
T TIGR03088 75 RLLRQ------------LRPDIVHTRNLA---A-LEAQLPAALAGVPARIHGEHGRDV--FD-----LDGSNWKYRWL-- 129 (374)
T ss_pred HHHHH------------hCCCEEEEcchh---H-HHHHHHHHhcCCCeEEEeecCccc--cc-----chhhHHHHHHH--
Confidence 33333 799999999842 2 22334455566665 334554321 00 00000112223
Q ss_pred HHHHHHHhhcCCEEEEeCHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCcccccccc
Q 011690 162 LRIEKYYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA 237 (479)
Q Consensus 162 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (479)
++.+.+.+|.++++|+.+++++.+.++.+ +.+|||| +.+.|.+..... ......
T Consensus 130 ---~~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~-~~~~~~------------------ 187 (374)
T TIGR03088 130 ---RRLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDR-SPILPP------------------ 187 (374)
T ss_pred ---HHHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccch-hhhhHh------------------
Confidence 66667789999999999999998877654 7899999 777776653211 111000
Q ss_pred ccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcc
Q 011690 238 GMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 317 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (479)
...++++.+++++||+.+.||++.+++|+..+.++..
T Consensus 188 --------------------~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~----------------------- 224 (374)
T TIGR03088 188 --------------------DFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLP----------------------- 224 (374)
T ss_pred --------------------hcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCc-----------------------
Confidence 0112334689999999999999999999999876510
Q ss_pred cCCCCEEEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCc
Q 011690 318 YLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP 396 (479)
Q Consensus 318 ~~~p~~~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~P 396 (479)
...++++|+++|+|+..+.+++.++++++ ++|.|.|. .+|+..+|++||++|+| |..|+||++++|||+||+|
T Consensus 225 ~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~p---S~~Eg~~~~~lEAma~G~P 298 (374)
T TIGR03088 225 EGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGE---RDDVPALMQALDLFVLP---SLAEGISNTILEAMASGLP 298 (374)
T ss_pred ccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCC---cCCHHHHHHhcCEEEec---cccccCchHHHHHHHcCCC
Confidence 01347999999999999999999999999 67999997 88999999999999998 6678999999999999999
Q ss_pred EEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHHHHHHHHHHH
Q 011690 397 VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITEV 473 (479)
Q Consensus 397 VIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~ 473 (479)
||+|+.++.+|+++++.+|+++ +|++++++++.++++ +++.++.++.++++.. ..++|+...++ ...+++++
T Consensus 299 vv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~----~~~~~~~~~~~a~~~~~~~fs~~~~~~~-~~~~y~~~ 373 (374)
T TIGR03088 299 VIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVS----DPAARRAHGAAGRARAEQQFSINAMVAA-YAGLYDQL 373 (374)
T ss_pred EEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHh
Confidence 9999999999999999999999 579999999999998 5888888988888754 57788776554 44555443
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-36 Score=307.33 Aligned_cols=367 Identities=19% Similarity=0.216 Sum_probs=248.9
Q ss_pred ceEEEEEecCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcc-cccCCCCeEEEEeecCCCCCCCCCchhHHHHHHH
Q 011690 5 GRACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHA-AILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLL 82 (479)
Q Consensus 5 ~~~~i~~~~~~g~~~r~-~~~a~~La~~~G~eV~Vv~~~~~~~~~-~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~ 82 (479)
|++++.-....|++.++ ...|..|+++ ||+|+|+|........ ......++.++..+.+ .+. .....+..+.
T Consensus 2 kIl~~~~~~~~gG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~----~~~~~~~~~~ 75 (392)
T cd03805 2 RVAFIHPDLGIGGAERLVVDAALALQSR-GHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDW-LPR----SIFGRFHILC 75 (392)
T ss_pred eEEEECCCCCCchHHHHHHHHHHHHHhC-CCeEEEEcCCCCchhcchhccCCeeEEEEEeEE-Ecc----hhhHhHHHHH
Confidence 55554433334554444 5667888875 9999999975432111 1111223555555411 111 1111122222
Q ss_pred HHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHH
Q 011690 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVL 162 (479)
Q Consensus 83 ~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (479)
..+......++....+..++|+||+++ +..... +.+...+.|+|+++|... ..... ..+...+++++. ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~Dvi~~~~---~~~~~~--~~~~~~~~~~i~~~h~~~-~~~~~---~~~~~~~~~~~~-~~ 145 (392)
T cd03805 76 AYLRMLYLALYLLLLPDEKYDVFIVDQ---VSACVP--LLKLFSPSKILFYCHFPD-QLLAQ---RGSLLKRLYRKP-FD 145 (392)
T ss_pred HHHHHHHHHHHHHhcccCCCCEEEEcC---cchHHH--HHHHhcCCcEEEEEecCh-HHhcC---CCcHHHHHHHHH-HH
Confidence 223322222222123447999999987 322221 223334478888888432 11111 112222222221 34
Q ss_pred HHHHHHhhcCCEEEEeCHHHHHHHHHhhCCe----EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCcccccccc
Q 011690 163 RIEKYYGKMANGCLCVTQAMQHELAQNWGIK----ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA 237 (479)
Q Consensus 163 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~----~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (479)
.+|+..++.+|.++++|+.+++.+.+.++.. ..+|||+ +.+.|.+........
T Consensus 146 ~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~---------------------- 203 (392)
T cd03805 146 WLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPG---------------------- 203 (392)
T ss_pred HHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCccccccccc----------------------
Confidence 4588899999999999999999888766432 3589999 766676543211000
Q ss_pred ccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcc
Q 011690 238 GMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 317 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (479)
..... +...+++++||+.+.||++.+++|+..+.++
T Consensus 204 ------------------~~~~~-~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~------------------------- 239 (392)
T cd03805 204 ------------------LLIPK-SGKKTFLSINRFERKKNIALAIEAFAILKDK------------------------- 239 (392)
T ss_pred ------------------ccccC-CCceEEEEEeeecccCChHHHHHHHHHHHhh-------------------------
Confidence 00122 2335899999999999999999999999875
Q ss_pred cCC---CCEEEEEEecCCCh--------HHHHHHHHH-cCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCc
Q 011690 318 YLY---PRLLFIITGKGPDK--------ESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLP 384 (479)
Q Consensus 318 ~~~---p~~~l~IvG~G~~~--------~~l~~~~~~-~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p 384 (479)
. |+++|+++|+|+.+ +.+++.+++ +++ ++|.|+|. ++.+++..+|++||++++| |..|+||
T Consensus 240 --~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~-~~~~~~~~~l~~ad~~l~~---s~~E~~g 313 (392)
T cd03805 240 --LAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPS-ISDSQKELLLSSARALLYT---PSNEHFG 313 (392)
T ss_pred --cccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCC-CChHHHHHHHhhCeEEEEC---CCcCCCC
Confidence 5 79999999998753 678888998 888 78999997 9999999999999999998 6678899
Q ss_pred HHHHHHHhCCCcEEEecCccchhccccCccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHH
Q 011690 385 MKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEW 462 (479)
Q Consensus 385 ~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~ 462 (479)
++++|||+||+|||+++.++..|++.++.+|+++ .|+++++++|.++++ +++.++++++++++.. ..++|+...
T Consensus 314 ~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~~~~~~a~~i~~l~~----~~~~~~~~~~~a~~~~~~~~s~~~~~ 389 (392)
T cd03805 314 IVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEPTPEEFAEAMLKLAN----DPDLADRMGAAGRKRVKEKFSTEAFA 389 (392)
T ss_pred chHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCCCHHHHHHHHHHHHh----ChHHHHHHHHHHHHHHHHhcCHHHHh
Confidence 9999999999999999999999999999999998 679999999999999 5788899999888743 456665544
Q ss_pred H
Q 011690 463 E 463 (479)
Q Consensus 463 ~ 463 (479)
+
T Consensus 390 ~ 390 (392)
T cd03805 390 E 390 (392)
T ss_pred h
Confidence 3
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=310.99 Aligned_cols=361 Identities=19% Similarity=0.129 Sum_probs=234.6
Q ss_pred HHHHHHHhhCCC--cEEEEecCCCC-------CcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 011690 23 YQALSLARQMSL--EVDVVAYGGSK-------PHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (479)
Q Consensus 23 ~~a~~La~~~G~--eV~Vv~~~~~~-------~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 93 (479)
..+..|++ .|| +|+|+|..... ........+|+++++++. .+..... ......++..+... +.
T Consensus 34 ~La~~L~~-~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~--~~~~~~~-~~~~~~~~~~~~~~----l~ 105 (439)
T TIGR02472 34 ELARALAR-RSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPF--GPRRYLR-KELLWPYLDELADN----LL 105 (439)
T ss_pred HHHHHHHh-CCCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecC--CCCCCcC-hhhhhhhHHHHHHH----HH
Confidence 33555556 487 99999964221 011112257999999983 2221111 01111111111111 11
Q ss_pred HHHhhc-CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcC----CCchhHHHHHHHhHHHHHHHH
Q 011690 94 FLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG----RRSHFVSIYRCFSVLRIEKYY 168 (479)
Q Consensus 94 ~l~~~~-~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~e~~~ 168 (479)
.++.+. .+||+||+|+ ....+++.++++..++|+|+|.|+....... ... ....+.+.+........|+..
T Consensus 106 ~~~~~~~~~~DvIH~h~---~~~~~~~~~~~~~~~~p~V~t~H~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (439)
T TIGR02472 106 QHLRQQGHLPDLIHAHY---ADAGYVGARLSRLLGVPLIFTGHSLGREKRR-RLLAAGLKPQQIEKQYNISRRIEAEEET 181 (439)
T ss_pred HHHHHcCCCCCEEEEcc---hhHHHHHHHHHHHhCCCEEEecccccchhhh-hcccCCCChhhhhhhcchHHHHHHHHHH
Confidence 122222 3799999998 3455667777788899999999986422110 000 000111111111011247778
Q ss_pred hhcCCEEEEeCHHHHHHHHHhh-CC---eEEEecCC-CCCCCCCCChH-HHHHHHHhhhhcccCCCCccccccccccCCc
Q 011690 169 GKMANGCLCVTQAMQHELAQNW-GI---KATVLYDQ-PPEFFHPTSLE-EKHELFCRLNKILHQPLGVQDCVSNAGMEGQ 242 (479)
Q Consensus 169 ~~~ad~vi~vS~~~~~~l~~~~-~~---~~~vi~n~-~~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (479)
++.+|.++++|+.........+ ++ ++.+|||| +.+.|.|.... ....+...+.
T Consensus 182 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~--------------------- 240 (439)
T TIGR02472 182 LAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLA--------------------- 240 (439)
T ss_pred HHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHH---------------------
Confidence 8899999999976544333222 33 38899999 77778765321 1111111110
Q ss_pred ccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCC
Q 011690 243 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 322 (479)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 322 (479)
.++..++++ +|+++||+.+.||++.||+|++.+.+. + ..++
T Consensus 241 -------------~~~~~~~~~-~i~~vGrl~~~Kg~~~li~A~~~l~~~--~-----------------------~~~~ 281 (439)
T TIGR02472 241 -------------PFLKDPEKP-PILAISRPDRRKNIPSLVEAYGRSPKL--Q-----------------------EMAN 281 (439)
T ss_pred -------------hhccccCCc-EEEEEcCCcccCCHHHHHHHHHhChhh--h-----------------------hhcc
Confidence 012234444 899999999999999999999865321 0 1244
Q ss_pred EEEEEEecCCChHH-----------HHHHHHHcCC-CcEEEecCCCCcchHHHHHHcC----CEEEEcccCCCCCCCcHH
Q 011690 323 LLFIITGKGPDKES-----------YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPMK 386 (479)
Q Consensus 323 ~~l~IvG~G~~~~~-----------l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~a----di~v~p~~~s~~e~~p~~ 386 (479)
+. +|+|+|++.+. +++.++++++ ++|.|.|. ++.++++.+|+.| |++|+| |..|+||++
T Consensus 282 l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~-~~~~~~~~~~~~a~~~~Dv~v~p---S~~E~fg~~ 356 (439)
T TIGR02472 282 LV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKH-HRPDDVPELYRLAARSRGIFVNP---ALTEPFGLT 356 (439)
T ss_pred EE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCC-CCHHHHHHHHHHHhhcCCEEecc---cccCCcccH
Confidence 44 36788875432 3445677888 78999997 9999999999987 999998 667999999
Q ss_pred HHHHHhCCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHH
Q 011690 387 VVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWE 463 (479)
Q Consensus 387 llEama~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~ 463 (479)
++||||||+|||+|+.|+++|++.++.+|+++ .|+++|+++|.++++ +++.++.|++++++.. ..++|+...+
T Consensus 357 ~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~~fsw~~~~~ 432 (439)
T TIGR02472 357 LLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALS----DSSQWQLWSRNGIEGVRRHYSWDAHVE 432 (439)
T ss_pred HHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999999999999999998 579999999999999 5888999999998743 4566655444
Q ss_pred H
Q 011690 464 E 464 (479)
Q Consensus 464 ~ 464 (479)
+
T Consensus 433 ~ 433 (439)
T TIGR02472 433 K 433 (439)
T ss_pred H
Confidence 3
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=297.20 Aligned_cols=351 Identities=18% Similarity=0.219 Sum_probs=246.0
Q ss_pred eEEEEEecCCCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHH
Q 011690 6 RACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (479)
Q Consensus 6 ~~~i~~~~~~g~~~r~~~-~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 84 (479)
+++++..+..|+.+++.. .+..|+++ ||+|+|+|...... .....+++.++.++....+.. ...... ...
T Consensus 2 ki~~~~~p~~gG~~~~~~~la~~L~~~-G~~v~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~ 72 (371)
T cd04962 2 KIGIVCYPTYGGSGVVATELGKALARR-GHEVHFITSSRPFR--LDEYSPNIFFHEVEVPQYPLF---QYPPYD---LAL 72 (371)
T ss_pred ceeEEEEeCCCCccchHHHHHHHHHhc-CCceEEEecCCCcc--hhhhccCeEEEEecccccchh---hcchhH---HHH
Confidence 355566777777665554 46777775 99999999754321 112234666655541111111 000000 011
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHh---cCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhH
Q 011690 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL---RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSV 161 (479)
Q Consensus 85 l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~---~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (479)
... +..++ +..+||+||+|.+ .+....+.++.+. .++|+|++.|+..+.... .. ..++++
T Consensus 73 ~~~----l~~~i-~~~~~divh~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~----~~~~~~-- 135 (371)
T cd04962 73 ASK----IAEVA-KRYKLDLLHVHYA--VPHAVAAYLAREILGKKDLPVVTTLHGTDITLVG----QD----PSFQPA-- 135 (371)
T ss_pred HHH----HHHHH-hcCCccEEeeccc--CCccHHHHHHHHhcCcCCCcEEEEEcCCcccccc----cc----ccchHH--
Confidence 111 11222 2279999999974 2223333333333 378999999975422111 01 111223
Q ss_pred HHHHHHHhhcCCEEEEeCHHHHHHHHHhhCC--eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccc
Q 011690 162 LRIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG 238 (479)
Q Consensus 162 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (479)
++...+.+|.++++|+.+++.+.+.++. ++.++||+ +...|.+..... ...
T Consensus 136 ---~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~~---~~~-------------------- 189 (371)
T cd04962 136 ---TRFSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEA---LKR-------------------- 189 (371)
T ss_pred ---HHHHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchHH---HHH--------------------
Confidence 5666788999999999999988877543 38899999 555555443211 111
Q ss_pred cCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCccc
Q 011690 239 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 318 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (479)
.++..+++ .+++++|++.+.||++.+++|+..+.+
T Consensus 190 -----------------~~~~~~~~-~~il~~g~l~~~K~~~~li~a~~~l~~--------------------------- 224 (371)
T cd04962 190 -----------------RLGAPEGE-KVLIHISNFRPVKRIDDVIRIFAKVRK--------------------------- 224 (371)
T ss_pred -----------------hcCCCCCC-eEEEEecccccccCHHHHHHHHHHHHh---------------------------
Confidence 11233444 489999999999999999999998865
Q ss_pred CCCCEEEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcE
Q 011690 319 LYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 397 (479)
Q Consensus 319 ~~p~~~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PV 397 (479)
.++++|+|+|.|++.+.+++.++++++ ++|.|.|. .+++..+|+.||++|+| |..|++|++++|||+||+||
T Consensus 225 -~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~~d~~v~p---s~~E~~~~~~~EAma~g~Pv 297 (371)
T cd04962 225 -EVPARLLLVGDGPERSPAERLARELGLQDDVLFLGK---QDHVEELLSIADLFLLP---SEKESFGLAALEAMACGVPV 297 (371)
T ss_pred -cCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecC---cccHHHHHHhcCEEEeC---CCcCCCccHHHHHHHcCCCE
Confidence 245899999999999999999999988 68999998 67899999999999999 56788999999999999999
Q ss_pred EEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh-hhhhchHHHHHH
Q 011690 398 CAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM-GLSARWATEWEE 464 (479)
Q Consensus 398 Ias~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~~~ 464 (479)
|+|+.++..|++.++.+|+++ +|++++++++.++++ +++.+..|++++++. ...++|+...++
T Consensus 298 I~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 363 (371)
T cd04962 298 VASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLE----DDELWQEFSRAARNRAAERFDSERIVPQ 363 (371)
T ss_pred EEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 999999999999999999999 479999999999998 588999999999885 456777665543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=301.22 Aligned_cols=271 Identities=19% Similarity=0.225 Sum_probs=210.4
Q ss_pred hcCCCcEEEEeCCCCcchHHHHHHHHH--hcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEE
Q 011690 98 KIASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGC 175 (479)
Q Consensus 98 ~~~~~DvI~~~~p~~~~~~~~~~~~~~--~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~v 175 (479)
+..+||+||+|.. .....+.+++. ..+.|+++++|+..... . .....++.. .+..++.+|.+
T Consensus 115 ~~~~~diihaH~~---~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~-------~-~~~~~~~~~-----~~~~~~~ad~v 178 (406)
T PRK15427 115 TPFVADVFIAHFG---PAGVTAAKLRELGVLRGKIATIFHGIDISS-------R-EVLNHYTPE-----YQQLFRRGDLM 178 (406)
T ss_pred ccCCCCEEEEcCC---hHHHHHHHHHHhCCCCCCeEEEEccccccc-------c-hhhhhhhHH-----HHHHHHhCCEE
Confidence 3468999999983 22333333433 23446788999764110 0 011111111 23344789999
Q ss_pred EEeCHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcc
Q 011690 176 LCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTS 251 (479)
Q Consensus 176 i~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (479)
+++|+.+++.+.+. +.+ +.++||| +.+.|.+....
T Consensus 179 v~~S~~~~~~l~~~-g~~~~ki~vi~nGvd~~~f~~~~~~---------------------------------------- 217 (406)
T PRK15427 179 LPISDLWAGRLQKM-GCPPEKIAVSRMGVDMTRFSPRPVK---------------------------------------- 217 (406)
T ss_pred EECCHHHHHHHHHc-CCCHHHEEEcCCCCCHHHcCCCccc----------------------------------------
Confidence 99999999998764 654 8899999 66666543210
Q ss_pred ccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC
Q 011690 252 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 331 (479)
Q Consensus 252 ~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G 331 (479)
..+.+..|+++||+.+.||++.+++|++.+.++ .++++|.|+|+|
T Consensus 218 --------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~l~ivG~G 262 (406)
T PRK15427 218 --------APATPLEIISVARLTEKKGLHVAIEACRQLKEQ---------------------------GVAFRYRILGIG 262 (406)
T ss_pred --------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhh---------------------------CCCEEEEEEECc
Confidence 112345799999999999999999999999875 789999999999
Q ss_pred CChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCC-C--CCCCcHHHHHHHhCCCcEEEecCccchh
Q 011690 332 PDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-S--GLDLPMKVVDMFGCGLPVCAVSYSCIEE 407 (479)
Q Consensus 332 ~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-~--~e~~p~~llEama~G~PVIas~~~~~~e 407 (479)
+..+.+++.++++++ ++|.|+|. ++.+++.++|++||++|+|+... . .||+|++++|||+||+|||+|+.++++|
T Consensus 263 ~~~~~l~~~~~~~~l~~~V~~~G~-~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E 341 (406)
T PRK15427 263 PWERRLRTLIEQYQLEDVVEMPGF-KPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPE 341 (406)
T ss_pred hhHHHHHHHHHHcCCCCeEEEeCC-CCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchh
Confidence 999999999999999 78999995 99999999999999999995432 2 3899999999999999999999999999
Q ss_pred ccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHH
Q 011690 408 LVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEE 464 (479)
Q Consensus 408 ~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~ 464 (479)
+++++.+|+++ +|+++++++|.++++. |++.++.|++++++.. ..++|+...++
T Consensus 342 ~v~~~~~G~lv~~~d~~~la~ai~~l~~~---d~~~~~~~~~~ar~~v~~~f~~~~~~~~ 398 (406)
T PRK15427 342 LVEADKSGWLVPENDAQALAQRLAAFSQL---DTDELAPVVKRAREKVETDFNQQVINRE 398 (406)
T ss_pred hhcCCCceEEeCCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 99999999999 5799999999999994 4888999999998753 45666555543
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=321.86 Aligned_cols=385 Identities=18% Similarity=0.164 Sum_probs=255.3
Q ss_pred ChhHHHHHHHHHhh---CC--CcEEEEecCCCCCc-------c--------------cccCCCCeEEEEeecCCCCC-CC
Q 011690 18 SPRMQYQALSLARQ---MS--LEVDVVAYGGSKPH-------A--------------AILEHPSIHIHTMTQWPTIP-RG 70 (479)
Q Consensus 18 ~~r~~~~a~~La~~---~G--~eV~Vv~~~~~~~~-------~--------------~~~~~~gi~i~~~~~~~~~~-~~ 70 (479)
.||+..++..||+. +| |+|+|+|.....+. + .....+|++|+++|.+ |. ..
T Consensus 194 tGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~~~~~~~~~~g~rIvRip~G--P~~~~ 271 (1050)
T TIGR02468 194 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSENDGDEMGESSGAYIIRIPFG--PRDKY 271 (1050)
T ss_pred CCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccccccccccccCCCCeEEEEeccC--CCCCC
Confidence 45555554444444 47 89999997643211 0 1112359999999943 33 22
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHH----HHhh-----cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhh
Q 011690 71 LPKVLKPVLLLLKPLIQFFMLLWF----LCVK-----IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTL 141 (479)
Q Consensus 71 ~~~~~~~~~~l~~~l~~~~~~~~~----l~~~-----~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~ 141 (479)
+++. ..+.++-.+...+...+.. +..+ ...||+||.|. +.+..++..++...++|+|+|.|..+-.-
T Consensus 272 l~Ke-~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHy---w~sG~aa~~L~~~lgVP~V~T~HSLgr~K 347 (1050)
T TIGR02468 272 IPKE-ELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHY---ADAGDSAALLSGALNVPMVLTGHSLGRDK 347 (1050)
T ss_pred cCHH-HHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECc---chHHHHHHHHHHhhCCCEEEECccchhhh
Confidence 3331 1122222222222211111 0001 11499999998 77788888889999999999999876221
Q ss_pred hh-h-hcCC--Cchh---HHHHHHHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhC----------------------C
Q 011690 142 LS-L-SLGR--RSHF---VSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWG----------------------I 192 (479)
Q Consensus 142 ~~-~-~~~~--~~~~---~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~----------------------~ 192 (479)
.. + ..+. ...+ +++..+ ...|+.....||.||++|+.+++++...|+ .
T Consensus 348 ~~~ll~~g~~~~~~~~~~y~~~~R---i~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~ 424 (1050)
T TIGR02468 348 LEQLLKQGRMSKEEINSTYKIMRR---IEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGR 424 (1050)
T ss_pred hhhhcccccccccccccccchHHH---HHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhccccccccc
Confidence 10 0 0010 0000 111111 134888889999999999999987666653 1
Q ss_pred ---eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCCCCCeEEE
Q 011690 193 ---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVV 268 (479)
Q Consensus 193 ---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 268 (479)
++.||||| |.+.|.|......... ++.. ..++.. ...+... ++ .+...+++| +|+
T Consensus 425 ~~~ri~VIPpGVD~~~F~P~~~~~~~~~---~~~~------------~~~~~~---~~~~~~~-l~-r~~~~pdkp-vIL 483 (1050)
T TIGR02468 425 FMPRMAVIPPGMEFSHIVPHDGDMDGET---EGNE------------EHPAKP---DPPIWSE-IM-RFFTNPRKP-MIL 483 (1050)
T ss_pred CCCCeEEeCCCCcHHHccCCCccccchh---cccc------------cccccc---cchhhHH-HH-hhcccCCCc-EEE
Confidence 47999999 8888988642211100 0000 000000 0000000 00 112345666 899
Q ss_pred EEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh-----------HHH
Q 011690 269 SSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-----------ESY 337 (479)
Q Consensus 269 ~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~-----------~~l 337 (479)
++||+.+.||++.||+|+..+.+. ...+++. +|+|+|+.. ..+
T Consensus 484 ~VGRL~p~KGi~~LIeAf~~L~~l-------------------------~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L 537 (1050)
T TIGR02468 484 ALARPDPKKNITTLVKAFGECRPL-------------------------RELANLT-LIMGNRDDIDEMSSGSSSVLTSV 537 (1050)
T ss_pred EEcCCccccCHHHHHHHHHHhHhh-------------------------ccCCCEE-EEEecCchhhhhhccchHHHHHH
Confidence 999999999999999999998642 0235676 466877542 356
Q ss_pred HHHHHHcCC-CcEEEecCCCCcchHHHHHHcC----CEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccC
Q 011690 338 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 412 (479)
Q Consensus 338 ~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~a----di~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~ 412 (479)
++.++++++ ++|.|+|. ++.++++.+|+.| |+||+| |..|+||++++||||||+|||||+.||+.|++.++
T Consensus 538 ~~li~~lgL~g~V~FlG~-v~~edvp~lYr~Ad~s~DVFV~P---S~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g 613 (1050)
T TIGR02468 538 LKLIDKYDLYGQVAYPKH-HKQSDVPDIYRLAAKTKGVFINP---AFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVL 613 (1050)
T ss_pred HHHHHHhCCCCeEEecCC-CCHHHHHHHHHHhhhcCCeeeCC---cccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccC
Confidence 778899999 78999997 9999999999988 699998 77899999999999999999999999999999999
Q ss_pred ccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHH
Q 011690 413 KNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 466 (479)
Q Consensus 413 ~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 466 (479)
.+|+++ .|+++||++|.++++ +++.+++|++++++....++|+..-++++
T Consensus 614 ~nGlLVdP~D~eaLA~AL~~LL~----Dpelr~~m~~~gr~~v~~FSWe~ia~~yl 665 (1050)
T TIGR02468 614 DNGLLVDPHDQQAIADALLKLVA----DKQLWAECRQNGLKNIHLFSWPEHCKTYL 665 (1050)
T ss_pred CcEEEECCCCHHHHHHHHHHHhh----CHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 999999 479999999999999 69999999999988655565555444433
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=298.96 Aligned_cols=360 Identities=17% Similarity=0.160 Sum_probs=237.3
Q ss_pred ChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 011690 18 SPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCV 97 (479)
Q Consensus 18 ~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~ 97 (479)
++.....|..|+++ ||+|+|+|..+..... . |+++++++...........+..........-..++..+..+..
T Consensus 10 p~~~~~la~~L~~~-G~~v~~~~~~~~~~~~----~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (396)
T cd03818 10 PGQFRHLAPALAAQ-GHEVVFLTEPNAAPPP----G-GVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAVARALLALRA 83 (396)
T ss_pred chhHHHHHHHHHHC-CCEEEEEecCCCCCCC----C-CeeEEEecCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHh
Confidence 35566789999996 9999999987753221 1 7999999833221111111111111111111222333333333
Q ss_pred hcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhh---hhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCE
Q 011690 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTL---LSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANG 174 (479)
Q Consensus 98 ~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 174 (479)
+..+||+||+|.-+ ... ..+.....++|+|...|-+...- ...............+...........++.+|.
T Consensus 84 ~~~~pdvi~~h~~~--~~~--~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 159 (396)
T cd03818 84 KGFRPDVIVAHPGW--GET--LFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADA 159 (396)
T ss_pred cCCCCCEEEECCcc--chh--hhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCE
Confidence 44689999999832 111 11222335688877554221000 000000001110001101000113456678999
Q ss_pred EEEeCHHHHHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccc
Q 011690 175 CLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLA 253 (479)
Q Consensus 175 vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (479)
+|++|+.+++.+.+.++.++.+|||| +.+.|.|..... ... .
T Consensus 160 vi~~s~~~~~~~~~~~~~ki~vI~ngvd~~~f~~~~~~~-~~~----~-------------------------------- 202 (396)
T cd03818 160 GVSPTRWQRSTFPAELRSRISVIHDGIDTDRLRPDPQAR-LRL----P-------------------------------- 202 (396)
T ss_pred EECCCHHHHhhCcHhhccceEEeCCCccccccCCCchhh-hcc----c--------------------------------
Confidence 99999999998877766679999999 777887764211 110 0
Q ss_pred ccccccCCCCCeEEEEEec-CCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC
Q 011690 254 GIDVFLKPNRPALVVSSTS-WTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 332 (479)
Q Consensus 254 ~~~~~~~~~~~~~i~~~g~-~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~ 332 (479)
....+.++++ +++++|| +.+.||++.+++|+..+.++ .|+++|+|+|++.
T Consensus 203 -~~~~~~~~~~-~i~~vgR~l~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~lvivG~~~ 253 (396)
T cd03818 203 -NGRVLTPGDE-VITFVARNLEPYRGFHVFMRALPRLLRA---------------------------RPDARVVIVGGDG 253 (396)
T ss_pred -ccccCCCCCe-EEEEECCCcccccCHHHHHHHHHHHHHH---------------------------CCCcEEEEEcCCC
Confidence 0001223444 7899997 99999999999999998875 8999999999742
Q ss_pred --------ChH-HHHHHHHHc----CCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEE
Q 011690 333 --------DKE-SYEEKIRRL----RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 399 (479)
Q Consensus 333 --------~~~-~l~~~~~~~----~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIa 399 (479)
..+ ..++.++++ +.++|.|+|. ++.+++..+|+.||++++| |..+++|++++||||||+|||+
T Consensus 254 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~-v~~~~~~~~l~~adv~v~~---s~~e~~~~~llEAmA~G~PVIa 329 (396)
T cd03818 254 VSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGR-VPYDQYLALLQVSDVHVYL---TYPFVLSWSLLEAMACGCLVVG 329 (396)
T ss_pred cccCCCCCCcccHHHHHHHHhhcccCcceEEEeCC-CCHHHHHHHHHhCcEEEEc---CcccccchHHHHHHHCCCCEEE
Confidence 111 122333333 3478999997 9999999999999999998 6678899999999999999999
Q ss_pred ecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhh-hchHHH
Q 011690 400 VSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS-ARWATE 461 (479)
Q Consensus 400 s~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~w~~~ 461 (479)
|+.++.+|++.++.+|+++ .|+++++++|.++++ +++.+++|++++++.... ++|+..
T Consensus 330 s~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~----~~~~~~~l~~~ar~~~~~~fs~~~~ 390 (396)
T cd03818 330 SDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD----DPARRARLRRAARRTALRYDLLSVC 390 (396)
T ss_pred cCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhccHHHH
Confidence 9999999999999999998 579999999999999 589999999999885433 555443
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-34 Score=291.62 Aligned_cols=353 Identities=20% Similarity=0.204 Sum_probs=246.2
Q ss_pred hHHHHHHHHHhhCCCcEEEEecCCCCCccc-ccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 011690 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK 98 (479)
Q Consensus 20 r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~-~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~ 98 (479)
.+...+..|+++ ||+|+|++......... .....++.+++++ ..+....... .....+..+... +...+.+
T Consensus 26 ~~~~l~~~L~~~-g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~ 97 (398)
T cd03800 26 YVLELARALARL-GHEVDIFTRRIDDALPPIVELAPGVRVVRVP--AGPAEYLPKE-ELWPYLDEFADD----LLRFLRR 97 (398)
T ss_pred hHHHHHHHHhcc-CceEEEEEecCCcccCCccccccceEEEecc--cccccCCChh-hcchhHHHHHHH----HHHHHHh
Confidence 345567777775 99999999654432211 2345689998887 2221111110 011111111111 2222222
Q ss_pred c-CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEE
Q 011690 99 I-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLC 177 (479)
Q Consensus 99 ~-~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 177 (479)
. .+||+||+|.+ .....+..+++..++|+|.+.|+..................... ..|+..++.+|.+++
T Consensus 98 ~~~~~Div~~~~~---~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ad~ii~ 169 (398)
T cd03800 98 EGGRPDLIHAHYW---DSGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRI-----EAEERLLRAADRVIA 169 (398)
T ss_pred cCCCccEEEEecC---ccchHHHHHHhhcCCceEEEeecccccCCcccccccccchhhhh-----hHHHHHHhhCCEEEE
Confidence 1 29999999973 33445556677789999999998642110000000000111111 237778889999999
Q ss_pred eCHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccc
Q 011690 178 VTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLA 253 (479)
Q Consensus 178 vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (479)
+|+.+++.+.+.++.+ +.+|||| +.+.|.+....... ...
T Consensus 170 ~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~--~~~---------------------------------- 213 (398)
T cd03800 170 STPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEAR--RAR---------------------------------- 213 (398)
T ss_pred cCHHHHHHHHHHccccccccEEECCCCCccceecccchhhH--HHh----------------------------------
Confidence 9999999888876543 7899999 66666554321110 000
Q ss_pred ccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC
Q 011690 254 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 333 (479)
Q Consensus 254 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~ 333 (479)
....+++ .+++++||+.+.||++.+++|+..+.++ .++++|+|+|+|+.
T Consensus 214 ---~~~~~~~-~~i~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~l~i~G~~~~ 262 (398)
T cd03800 214 ---LLRDPDK-PRILAVGRLDPRKGIDTLIRAYAELPEL---------------------------RERANLVIVGGPRD 262 (398)
T ss_pred ---hccCCCC-cEEEEEcccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEECCCC
Confidence 1122334 4899999999999999999999999875 78899999998864
Q ss_pred h------HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccch
Q 011690 334 K------ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 406 (479)
Q Consensus 334 ~------~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~ 406 (479)
. +.+++.++++++ ++|.|+|. ++.+++..+++.||++++| |..|++|++++|||+||+|||+++.++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~adi~l~p---s~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~ 338 (398)
T cd03800 263 DILAMDEEELRELARELGVIDRVDFPGR-VSREDLPALYRAADVFVNP---ALYEPFGLTALEAMACGLPVVATAVGGPR 338 (398)
T ss_pred cchhhhhHHHHHHHHhcCCCceEEEecc-CCHHHHHHHHHhCCEEEec---ccccccCcHHHHHHhcCCCEEECCCCCHH
Confidence 2 345667788888 78999996 9999999999999999998 66688999999999999999999999999
Q ss_pred hccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHH
Q 011690 407 ELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWE 463 (479)
Q Consensus 407 e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~ 463 (479)
|+++++.+|+++ .|+++++++|.++++ +++.++.+++++++.. ..++|+..-+
T Consensus 339 e~i~~~~~g~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~~~a~~~~~~~~s~~~~~~ 394 (398)
T cd03800 339 DIVVDGVTGLLVDPRDPEALAAALRRLLT----DPALRRRLSRAGLRRARARYTWERVAA 394 (398)
T ss_pred HHccCCCCeEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999 469999999999998 5889999999998854 5666655443
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=291.81 Aligned_cols=271 Identities=22% Similarity=0.236 Sum_probs=212.1
Q ss_pred cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 99 ~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
..+||+||+|..+ ....+..+++..|+|+|+++|+....... ....... .+..+ ..++.+.+.+|.++++
T Consensus 80 ~~~~dvvh~~~~~---~~~~~~~~~~~~~~p~i~~~h~~~~~~~~-~~~~~~~-~~~~~-----~~~~~~~~~~d~ii~~ 149 (367)
T cd05844 80 RHRPDLVHAHFGF---DGVYALPLARRLGVPLVVTFHGFDATTSL-ALLLRSR-WALYA-----RRRRRLARRAALFIAV 149 (367)
T ss_pred hhCCCEEEeccCc---hHHHHHHHHHHcCCCEEEEEeCccccccc-hhhcccc-hhHHH-----HHHHHHHHhcCEEEEC
Confidence 3799999999732 23334445567799999999975321110 0000000 11222 2367777899999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
|+.+++.+.+. +.+ +.+++|| +.+.|.+...
T Consensus 150 s~~~~~~~~~~-~~~~~~i~vi~~g~d~~~~~~~~~-------------------------------------------- 184 (367)
T cd05844 150 SQFIRDRLLAL-GFPPEKVHVHPIGVDTAKFTPATP-------------------------------------------- 184 (367)
T ss_pred CHHHHHHHHHc-CCCHHHeEEecCCCCHHhcCCCCC--------------------------------------------
Confidence 99999988775 553 8899999 5555544321
Q ss_pred cccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh
Q 011690 255 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 334 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~ 334 (479)
...+..++++|++.+.||++.+++|+..+.++ .|+++|+|+|+|+..
T Consensus 185 ------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~ 231 (367)
T cd05844 185 ------ARRPPRILFVGRFVEKKGPLLLLEAFARLARR---------------------------VPEVRLVIIGDGPLL 231 (367)
T ss_pred ------CCCCcEEEEEEeeccccChHHHHHHHHHHHHh---------------------------CCCeEEEEEeCchHH
Confidence 11234799999999999999999999999875 789999999999999
Q ss_pred HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCC---CCCCCcHHHHHHHhCCCcEEEecCccchhccc
Q 011690 335 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK 410 (479)
Q Consensus 335 ~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s---~~e~~p~~llEama~G~PVIas~~~~~~e~i~ 410 (479)
+.+++.++++++ ++|.|.|. ++.+++..+|++||++++|+..+ ..|++|++++|||+||+|||+++.++..|++.
T Consensus 232 ~~~~~~~~~~~~~~~v~~~g~-~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~ 310 (367)
T cd05844 232 AALEALARALGLGGRVTFLGA-QPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVE 310 (367)
T ss_pred HHHHHHHHHcCCCCeEEECCC-CCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhhee
Confidence 999999999888 78999997 99999999999999999995432 25889999999999999999999999999999
Q ss_pred cCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHH
Q 011690 411 VDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEW 462 (479)
Q Consensus 411 ~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~ 462 (479)
++.+|+++ .|+++++++|.++++ +++.+++++.++++.. ..++|+..-
T Consensus 311 ~~~~g~~~~~~d~~~l~~~i~~l~~----~~~~~~~~~~~a~~~~~~~~s~~~~~ 361 (367)
T cd05844 311 DGETGLLVPEGDVAALAAALGRLLA----DPDLRARMGAAGRRRVEERFDLRRQT 361 (367)
T ss_pred cCCeeEEECCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 99999999 479999999999998 5888999998887743 356665443
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=292.11 Aligned_cols=343 Identities=14% Similarity=0.142 Sum_probs=237.5
Q ss_pred CChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 011690 17 RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLC 96 (479)
Q Consensus 17 ~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~ 96 (479)
..|+++.+...++++.-++|+|+|.............+|+.+++++......+...++.. + ....+... ++.++
T Consensus 19 ~~g~ve~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~----~~~~~ 92 (380)
T PRK15484 19 GAAAVETWIYQVAKRTSIPNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTR-L-DPLPYSQR----ILNIA 92 (380)
T ss_pred cccHHHHHHHHhhhhccCCeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhc-c-CchhHHHH----HHHHH
Confidence 467899999999977778999999877652222244577888888621110000001000 0 00111111 11111
Q ss_pred h--hcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCE
Q 011690 97 V--KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANG 174 (479)
Q Consensus 97 ~--~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 174 (479)
. +..++|+||+|+.+ .....+..+..++|+++++|+.. +......++.
T Consensus 93 ~~~~~~~~~vi~v~~~~----~~~~~~~~~~~~~~~v~~~h~~~--------------------------~~~~~~~~~~ 142 (380)
T PRK15484 93 HKFTITKDSVIVIHNSM----KLYRQIRERAPQAKLVMHMHNAF--------------------------EPELLDKNAK 142 (380)
T ss_pred HhcCCCCCcEEEEeCcH----HhHHHHHhhCCCCCEEEEEeccc--------------------------ChhHhccCCE
Confidence 1 12569999999942 22333445566789999999763 0111135799
Q ss_pred EEEeCHHHHHHHHHhhCC-eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccc
Q 011690 175 CLCVTQAMQHELAQNWGI-KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSL 252 (479)
Q Consensus 175 vi~vS~~~~~~l~~~~~~-~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (479)
++++|+.+++.+.+.++. ++.+|||| +.+.|.+.... ....+
T Consensus 143 ii~~S~~~~~~~~~~~~~~~i~vIpngvd~~~~~~~~~~---~~~~~--------------------------------- 186 (380)
T PRK15484 143 IIVPSQFLKKFYEERLPNADISIVPNGFCLETYQSNPQP---NLRQQ--------------------------------- 186 (380)
T ss_pred EEEcCHHHHHHHHhhCCCCCEEEecCCCCHHHcCCcchH---HHHHH---------------------------------
Confidence 999999999988776443 48999999 76667654321 11111
Q ss_pred cccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC
Q 011690 253 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 332 (479)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~ 332 (479)
+++.++. .+++++||+.+.||++.|++|++.+.++ .|+++|+|+|+|+
T Consensus 187 ----~~~~~~~-~~il~~Grl~~~Kg~~~Li~A~~~l~~~---------------------------~p~~~lvivG~g~ 234 (380)
T PRK15484 187 ----LNISPDE-TVLLYAGRISPDKGILLLMQAFEKLATA---------------------------HSNLKLVVVGDPT 234 (380)
T ss_pred ----hCCCCCC-eEEEEeccCccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCc
Confidence 1233344 4899999999999999999999999875 8999999999886
Q ss_pred C-----hH----HHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCC-CCCCCcHHHHHHHhCCCcEEEecC
Q 011690 333 D-----KE----SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 333 ~-----~~----~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-~~e~~p~~llEama~G~PVIas~~ 402 (479)
. .. .+++.+++++ .+|.|+|. ++.+++..+|++||++|+| | ..|+||++++||||||+|||+|+.
T Consensus 235 ~~~~~~~~~~~~~l~~~~~~l~-~~v~~~G~-~~~~~l~~~~~~aDv~v~p---S~~~E~f~~~~lEAma~G~PVI~s~~ 309 (380)
T PRK15484 235 ASSKGEKAAYQKKVLEAAKRIG-DRCIMLGG-QPPEKMHNYYPLADLVVVP---SQVEEAFCMVAVEAMAAGKPVLASTK 309 (380)
T ss_pred cccccchhHHHHHHHHHHHhcC-CcEEEeCC-CCHHHHHHHHHhCCEEEeC---CCCccccccHHHHHHHcCCCEEEeCC
Confidence 3 22 3444454544 57999997 9999999999999999998 4 358899999999999999999999
Q ss_pred ccchhccccCccEEEe---CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHHHHHHHHHHHHhhc
Q 011690 403 SCIEELVKVDKNGLLF---SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITEVISQF 477 (479)
Q Consensus 403 ~~~~e~i~~~~~G~l~---~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~ 477 (479)
|+++|++.++.+|+++ .|+++++++|.++++ |++. .++++++++.. ..++|+ ..+.++.+.+.+-|
T Consensus 310 gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~----d~~~-~~~~~~ar~~~~~~fsw~----~~a~~~~~~l~~~~ 379 (380)
T PRK15484 310 GGITEFVLEGITGYHLAEPMTSDSIISDINRTLA----DPEL-TQIAEQAKDFVFSKYSWE----GVTQRFEEQIHNWF 379 (380)
T ss_pred CCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHc----CHHH-HHHHHHHHHHHHHhCCHH----HHHHHHHHHHHHhc
Confidence 9999999999999954 479999999999999 4654 67888887642 455554 44444444444333
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=290.69 Aligned_cols=349 Identities=19% Similarity=0.264 Sum_probs=238.2
Q ss_pred hhHHHHHHHHHhh--CCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 011690 19 PRMQYQALSLARQ--MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLC 96 (479)
Q Consensus 19 ~r~~~~a~~La~~--~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~ 96 (479)
||+..++..|++. ..|+|+|++..... ....++++++++.+. . ..... +.+..+.. ...+.
T Consensus 16 GG~~~~v~~l~~~l~~~~~v~v~~~~~~~-----~~~~~~~~~~~~~~~--~--~~~~~-------~~~~~~~~-~~~~~ 78 (388)
T TIGR02149 16 GGAGVHVEELTRELARLMDVDVRCFGDQR-----FDSEGLTVKGYRPWS--E--LKEAN-------KALGTFSV-DLAMA 78 (388)
T ss_pred ccHhHHHHHHHHHHHHhcCeeEEcCCCch-----hcCCCeEEEEecChh--h--ccchh-------hhhhhhhH-HHHHh
Confidence 4444444444333 13789999875532 234688888887211 1 11111 11111100 01112
Q ss_pred hhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEE
Q 011690 97 VKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCL 176 (479)
Q Consensus 97 ~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi 176 (479)
.+..++|+||+|+ ....+.+.++++..++|+|+++|+..... ............+..++ ++...+.+|.++
T Consensus 79 ~~~~~~divh~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~ad~vi 149 (388)
T TIGR02149 79 NDPVDADVVHSHT---WYTFLAGHLAKKLYDKPLVVTAHSLEPLR-PWKEEQLGGGYKLSSWA-----EKTAIEAADRVI 149 (388)
T ss_pred hCCCCCCeEeecc---hhhhhHHHHHHHhcCCCEEEEeecccccc-cccccccccchhHHHHH-----HHHHHhhCCEEE
Confidence 2235799999998 33345566677778999999999864110 00000000111233344 788889999999
Q ss_pred EeCHHHHHHHHHhh-CC---eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcc
Q 011690 177 CVTQAMQHELAQNW-GI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTS 251 (479)
Q Consensus 177 ~vS~~~~~~l~~~~-~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (479)
++|+.+++.+.+.+ +. ++.+|||| +.+.|.+.... ....+
T Consensus 150 ~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~~~---~~~~~-------------------------------- 194 (388)
T TIGR02149 150 AVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGN---VVLDR-------------------------------- 194 (388)
T ss_pred EccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCchH---HHHHH--------------------------------
Confidence 99999999988876 43 38899999 66667654321 11111
Q ss_pred ccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC
Q 011690 252 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 331 (479)
Q Consensus 252 ~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G 331 (479)
++++++++ +++++||+.+.||++.+++|++.+. ++++++++|+|
T Consensus 195 -----~~~~~~~~-~i~~~Grl~~~Kg~~~li~a~~~l~------------------------------~~~~l~i~g~g 238 (388)
T TIGR02149 195 -----YGIDRSRP-YILFVGRITRQKGVPHLLDAVHYIP------------------------------KDVQVVLCAGA 238 (388)
T ss_pred -----hCCCCCce-EEEEEcccccccCHHHHHHHHHHHh------------------------------hcCcEEEEeCC
Confidence 23444554 7999999999999999999999874 35789999887
Q ss_pred CChH----HHHHHHHHcCC--CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccc
Q 011690 332 PDKE----SYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 405 (479)
Q Consensus 332 ~~~~----~l~~~~~~~~l--~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~ 405 (479)
+..+ .+++.+++++. ++|.|.+.+++.+++..+|++||++|+| |..|++|++++|||+||+|||+|+.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~p---s~~e~~g~~~lEA~a~G~PvI~s~~~~~ 315 (388)
T TIGR02149 239 PDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCP---SIYEPLGIVNLEAMACGTPVVASATGGI 315 (388)
T ss_pred CCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeC---CccCCCChHHHHHHHcCCCEEEeCCCCH
Confidence 6644 44555555554 3578765459999999999999999998 6678899999999999999999999999
Q ss_pred hhccccCccEEEe--CCH------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHHHHHHHHHH
Q 011690 406 EELVKVDKNGLLF--SSS------SELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITE 472 (479)
Q Consensus 406 ~e~i~~~~~G~l~--~~~------~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~ 472 (479)
.|+++++.+|+++ +++ ++++++|.++++ +++.++.|+.++++.. ..++|+...++ ...++++
T Consensus 316 ~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~~~a~~~~~~~~s~~~~~~~-~~~~y~~ 386 (388)
T TIGR02149 316 PEVVVDGETGFLVPPDNSDADGFQAELAKAINILLA----DPELAKKMGIAGRKRAEEEFSWGSIAKK-TVEMYRK 386 (388)
T ss_pred HHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHh
Confidence 9999999999999 456 899999999998 5899999999888743 45777766554 3344443
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=284.93 Aligned_cols=322 Identities=19% Similarity=0.187 Sum_probs=230.9
Q ss_pred CCChhHH-HHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 011690 16 GRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF 94 (479)
Q Consensus 16 g~~~r~~-~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 94 (479)
|+.+++. ..+..|++ .||+|+|++..... .......+++++.++ .. .............+.+.
T Consensus 10 gG~e~~~~~l~~~L~~-~g~~v~v~~~~~~~--~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~l~~~---------- 73 (355)
T cd03819 10 GGVERGTLELARALVE-RGHRSLVASAGGRL--VAELEAEGSRHIKLP--FI-SKNPLRILLNVARLRRL---------- 73 (355)
T ss_pred CcHHHHHHHHHHHHHH-cCCEEEEEcCCCch--HHHHHhcCCeEEEcc--cc-ccchhhhHHHHHHHHHH----------
Confidence 4433333 34566666 49999999865432 122344578877776 21 11111111111111111
Q ss_pred HHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCE
Q 011690 95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANG 174 (479)
Q Consensus 95 l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 174 (479)
+. ..+||+||+|++. ..+.+.++.+..++|+|.++|+..... . + .+.+.+.+|.
T Consensus 74 -~~-~~~~dii~~~~~~---~~~~~~~~~~~~~~~~i~~~h~~~~~~---------~-------~-----~~~~~~~~~~ 127 (355)
T cd03819 74 -IR-EEKVDIVHARSRA---PAWSAYLAARRTRPPFVTTVHGFYSVN---------F-------R-----YNAIMARGDR 127 (355)
T ss_pred -HH-HcCCCEEEECCCc---hhHHHHHHHHhcCCCEEEEeCCchhhH---------H-------H-----HHHHHHhcCE
Confidence 11 2799999999842 234444556677899999999875110 0 1 2233467999
Q ss_pred EEEeCHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHH--HHHHhhhhcccCCCCccccccccccCCcccccch
Q 011690 175 CLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKH--ELFCRLNKILHQPLGVQDCVSNAGMEGQKADETI 248 (479)
Q Consensus 175 vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (479)
++++|+.+.+.+.+.++.+ +.+|||| +.+.|.+....... ....+
T Consensus 128 vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~----------------------------- 178 (355)
T cd03819 128 VIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALARE----------------------------- 178 (355)
T ss_pred EEEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHH-----------------------------
Confidence 9999999999998777764 8899999 66667554321111 11111
Q ss_pred hccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE
Q 011690 249 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT 328 (479)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv 328 (479)
+...++ ..+++++||+.+.||++.+++|+..+.++ .++++|+|+
T Consensus 179 --------~~~~~~-~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~---------------------------~~~~~l~iv 222 (355)
T cd03819 179 --------WPLPKG-KPVILLPGRLTRWKGQEVFIEALARLKKD---------------------------DPDVHLLIV 222 (355)
T ss_pred --------cCCCCC-ceEEEEeeccccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEE
Confidence 122333 35899999999999999999999999874 688999999
Q ss_pred ecCCChHHH----HHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCC-CCCCCcHHHHHHHhCCCcEEEecC
Q 011690 329 GKGPDKESY----EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 329 G~G~~~~~l----~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-~~e~~p~~llEama~G~PVIas~~ 402 (479)
|.|+..+.+ ++.++++++ ++|.|.|. .+++..+|++||++++| | ..|++|++++|||+||+|||+++.
T Consensus 223 G~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~l~~ad~~i~p---s~~~e~~~~~l~EA~a~G~PvI~~~~ 296 (355)
T cd03819 223 GDAQGRRFYYAELLELIKRLGLQDRVTFVGH---CSDMPAAYALADIVVSA---STEPEAFGRTAVEAQAMGRPVIASDH 296 (355)
T ss_pred ECCcccchHHHHHHHHHHHcCCcceEEEcCC---cccHHHHHHhCCEEEec---CCCCCCCchHHHHHHhcCCCEEEcCC
Confidence 998765443 456677787 68999997 88999999999999998 4 678999999999999999999999
Q ss_pred ccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 403 SCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 403 ~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
++..|++.++.+|+++ +|+++++++|..++.. ++++++++++++++..
T Consensus 297 ~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~---~~~~~~~~~~~a~~~~ 346 (355)
T cd03819 297 GGARETVRPGETGLLVPPGDAEALAQALDQILSL---LPEGRAKMFAKARMCV 346 (355)
T ss_pred CCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhh---CHHHHHHHHHHHHHHH
Confidence 9999999999999998 5799999999766664 6899999999998843
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=279.27 Aligned_cols=282 Identities=20% Similarity=0.308 Sum_probs=215.1
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+++|. .....+..+++..++|+|.++|+..................... ...++.+.+.+|.++++|
T Consensus 83 ~~~Div~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 83 LGPDIVHTHTPF--SLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVR----RKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred cCCCEEEECCch--hhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHH----HHHHHHHhhhCCEEEecc
Confidence 799999999863 23344445566778999999998653222111111111111111 023778888999999999
Q ss_pred HHHHHHHHHhhCCe--EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccc
Q 011690 180 QAMQHELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 256 (479)
Q Consensus 180 ~~~~~~l~~~~~~~--~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
+.+++.+.+. +.+ +.++||+ +...|.+...... ...
T Consensus 157 ~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~------------------------------------- 195 (374)
T cd03817 157 EKIADLLREY-GVKRPIEVIPTGIDLDRFEPVDGDDE---RRK------------------------------------- 195 (374)
T ss_pred HHHHHHHHhc-CCCCceEEcCCccchhccCccchhHH---HHh-------------------------------------
Confidence 9999887664 443 7899999 6666665432111 111
Q ss_pred cccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHH
Q 011690 257 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 336 (479)
Q Consensus 257 ~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~ 336 (479)
..... ++..++++|++.+.||++.+++|+..+.++ .++++|+++|+|+..+.
T Consensus 196 ~~~~~-~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~ 247 (374)
T cd03817 196 LGIPE-DEPVLLYVGRLAKEKNIDFLIRAFARLLKE---------------------------EPDVKLVIVGDGPEREE 247 (374)
T ss_pred cCCCC-CCeEEEEEeeeecccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCchHHH
Confidence 11222 345899999999999999999999998875 68899999999999999
Q ss_pred HHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccE
Q 011690 337 YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 415 (479)
Q Consensus 337 l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G 415 (479)
+++.++++++ ++|.|.|. ++.+++..+|+.||++++| +..+++|++++|||+||+|||+++.++..|++.++.+|
T Consensus 248 ~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~l~~---s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g 323 (374)
T cd03817 248 LEELARELGLADRVIFTGF-VPREELPDYYKAADLFVFA---STTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENG 323 (374)
T ss_pred HHHHHHHcCCCCcEEEecc-CChHHHHHHHHHcCEEEec---ccccCcChHHHHHHHcCCcEEEeCCCChhhheecCcee
Confidence 9999998888 78999997 9999999999999999998 55677999999999999999999999999999999999
Q ss_pred EEeCCH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHH
Q 011690 416 LLFSSS-SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 464 (479)
Q Consensus 416 ~l~~~~-~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 464 (479)
+++++. .++++++.++++ +++.++.+++++++....+.|...+++
T Consensus 324 ~~~~~~~~~~~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (374)
T cd03817 324 FLFPPGDEALAEALLRLLQ----DPELRRRLSKNAEESAEKFSFAKKVEK 369 (374)
T ss_pred EEeCCCCHHHHHHHHHHHh----ChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999543 399999999999 588889999999886544444444443
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=276.51 Aligned_cols=358 Identities=23% Similarity=0.320 Sum_probs=252.6
Q ss_pred CCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccc------cCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011690 16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAI------LEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (479)
Q Consensus 16 g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~------~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 89 (479)
|...++...+..|+++ ||+|++++.......... ....++++++++. .... .......+.....+...
T Consensus 15 G~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~-- 88 (394)
T cd03794 15 GGAFRTTELAEELVKR-GHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPL--PPYK-KNGLLKRLLNYLSFALS-- 88 (394)
T ss_pred CcceeHHHHHHHHHhC-CceEEEEecCCCcccccccccceEEecCCeEEEEEec--CCCC-ccchHHHHHhhhHHHHH--
Confidence 3455666678888886 999999997654333222 2346888888883 2211 11111111111111111
Q ss_pred HHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhh-hhcCCC-chhHHHHHHHhHHHHHHH
Q 011690 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS-LSLGRR-SHFVSIYRCFSVLRIEKY 167 (479)
Q Consensus 90 ~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~e~~ 167 (479)
....+..+..+||+||+++++ ......+...++..++|++++.|+....... ...... ....+..+++ ++.
T Consensus 89 -~~~~~~~~~~~~D~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 161 (394)
T cd03794 89 -ALLALLKRRRRPDVIIATSPP-LLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKL-----ERL 161 (394)
T ss_pred -HHHHHHhcccCCCEEEEcCCh-HHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHH-----HHH
Confidence 122222135799999999843 4444445555666689999999986422111 111111 1111334444 888
Q ss_pred HhhcCCEEEEeCHHHHHHHHHhhCC---eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcc
Q 011690 168 YGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 243 (479)
Q Consensus 168 ~~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (479)
..+.+|.++++|+.+++.+. .++. ++.++||+ +...+.+...... ..+
T Consensus 162 ~~~~~d~vi~~s~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~------------------------ 213 (394)
T cd03794 162 IYRRADAIVVISPGMREYLV-RRGVPPEKISVIPNGVDLELFKPPPADES---LRK------------------------ 213 (394)
T ss_pred HHhcCCEEEEECHHHHHHHH-hcCCCcCceEEcCCCCCHHHcCCccchhh---hhh------------------------
Confidence 88999999999999999887 3333 38899999 5544544331111 000
Q ss_pred cccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCE
Q 011690 244 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 323 (479)
. ....++..++++|++.+.||++.+++|+..+.+ .+++
T Consensus 214 -------------~-~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~----------------------------~~~~ 251 (394)
T cd03794 214 -------------E-LGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKD----------------------------RPDI 251 (394)
T ss_pred -------------c-cCCCCcEEEEEecCcccccCHHHHHHHHHHHhh----------------------------cCCe
Confidence 0 112345689999999999999999999998864 2689
Q ss_pred EEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCC--CCCCcHHHHHHHhCCCcEEEec
Q 011690 324 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVS 401 (479)
Q Consensus 324 ~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~llEama~G~PVIas~ 401 (479)
+|+|+|+|+..+.+++.+...++++|.|.|. ++.+++.++|++||++++|+..+. +.++|.+++|||+||+|||+++
T Consensus 252 ~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~ 330 (394)
T cd03794 252 RFLIVGDGPEKEELKELAKALGLDNVTFLGR-VPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASV 330 (394)
T ss_pred EEEEeCCcccHHHHHHHHHHcCCCcEEEeCC-CChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEec
Confidence 9999999999999988888878889999995 999999999999999999965552 6778999999999999999999
Q ss_pred CccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhh-hhchHHH
Q 011690 402 YSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL-SARWATE 461 (479)
Q Consensus 402 ~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~w~~~ 461 (479)
.++..+++.++.+|+++ +|+++++++|.++++ +++.++++++++++... .++|+..
T Consensus 331 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~~ 389 (394)
T cd03794 331 DGESAELVEEAGAGLVVPPGDPEALAAAILELLD----DPEERAEMGENGRRYVEEKFSREKL 389 (394)
T ss_pred CCCchhhhccCCcceEeCCCCHHHHHHHHHHHHh----ChHHHHHHHHHHHHHHHHhhcHHHH
Confidence 99999999998999999 479999999999997 68999999999988543 4555443
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=305.25 Aligned_cols=279 Identities=17% Similarity=0.168 Sum_probs=202.0
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEE-EecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii-~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+|||||+|+ ....+++.++++..++|+|+ +.|+..... . ...+...++.. ........++.++++
T Consensus 399 ~kpDIVH~h~---~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~-~-----~~~~~~~~~~l----~~~l~~~~~~i~Vs~ 465 (694)
T PRK15179 399 SVPSVVHIWQ---DGSIFACALAALLAGVPRIVLSVRTMPPVD-R-----PDRYRVEYDII----YSELLKMRGVALSSN 465 (694)
T ss_pred cCCcEEEEeC---CcHHHHHHHHHHHcCCCEEEEEeCCCcccc-c-----hhHHHHHHHHH----HHHHHhcCCeEEEeC
Confidence 7999999998 45556677788888999877 567653110 0 01110111111 011111234566777
Q ss_pred CHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
|+..++.+.+.++.+ +.||||| +.+.|.+.+...+.. ..+.
T Consensus 466 S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~--~~~~--------------------------------- 510 (694)
T PRK15179 466 SQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMM--AQFD--------------------------------- 510 (694)
T ss_pred cHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHH--Hhhc---------------------------------
Confidence 888888777776764 8999999 766676543211110 0000
Q ss_pred cccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh
Q 011690 255 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 334 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~ 334 (479)
... ++...+|+++||+.+.||++.+|+|+..+.++ .|+++|+|+|+|+..
T Consensus 511 --~~~-~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~---------------------------~p~~~LvIvG~G~~~ 560 (694)
T PRK15179 511 --ART-SDARFTVGTVMRVDDNKRPFLWVEAAQRFAAS---------------------------HPKVRFIMVGGGPLL 560 (694)
T ss_pred --ccc-CCCCeEEEEEEeCCccCCHHHHHHHHHHHHHH---------------------------CcCeEEEEEccCcch
Confidence 011 22234899999999999999999999998775 889999999999999
Q ss_pred HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCc
Q 011690 335 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 413 (479)
Q Consensus 335 ~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~ 413 (479)
+.+++.++++++ ++|.|+|. .++++.+|+++|++|+| |..|+||++++|||+||+|||+|+.+|.+|+|.++.
T Consensus 561 ~~L~~l~~~lgL~~~V~flG~---~~dv~~ll~aaDv~Vlp---S~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~ 634 (694)
T PRK15179 561 ESVREFAQRLGMGERILFTGL---SRRVGYWLTQFNAFLLL---SRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGV 634 (694)
T ss_pred HHHHHHHHHcCCCCcEEEcCC---cchHHHHHHhcCEEEec---cccccchHHHHHHHHcCCeEEEECCCChHHHccCCC
Confidence 999999999999 78999997 57899999999999998 677999999999999999999999999999999999
Q ss_pred cEEEeC--C--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHH
Q 011690 414 NGLLFS--S--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEH 465 (479)
Q Consensus 414 ~G~l~~--~--~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 465 (479)
+|++++ | +++|+++|.+++.....+++..+..++.+.+ .++|+...+++
T Consensus 635 ~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~---~FS~~~~~~~~ 687 (694)
T PRK15179 635 TGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWASA---RFSLNQMIAST 687 (694)
T ss_pred CEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHHH---hCCHHHHHHHH
Confidence 999994 4 4689999998887533344443333333333 67777665543
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=279.75 Aligned_cols=336 Identities=14% Similarity=0.119 Sum_probs=231.0
Q ss_pred CChhHHHH----HHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 011690 17 RSPRMQYQ----ALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL 92 (479)
Q Consensus 17 ~~~r~~~~----a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 92 (479)
..+|+... +..|.+ .||+|+|++....... ......|+++++++ ..... ........+.. +
T Consensus 13 ~~gG~~~~~~~la~~L~~-~g~~v~v~~~~~~~~~-~~~~~~~i~~~~~~--~~~~~---~~~~~~~~~~~--------~ 77 (363)
T cd04955 13 KYGGFETFVEELAPRLVA-RGHEVTVYCRSPYPKQ-KETEYNGVRLIHIP--APEIG---GLGTIIYDILA--------I 77 (363)
T ss_pred ccCcHHHHHHHHHHHHHh-cCCCEEEEEccCCCCC-cccccCCceEEEcC--CCCcc---chhhhHHHHHH--------H
Confidence 34455544 455555 5999999997654333 13345789999988 22111 11111111111 1
Q ss_pred HHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcC
Q 011690 93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMA 172 (479)
Q Consensus 93 ~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~a 172 (479)
+....+..++|++|...|.. ..++.++ +..+.|++++.|+..+... .......++.++. |+...+.+
T Consensus 78 ~~~~~~~~~~~~i~~~~~~~---~~~~~~~-~~~~~~~v~~~h~~~~~~~----~~~~~~~~~~~~~-----~~~~~~~a 144 (363)
T cd04955 78 LHALFVKRDIDHVHALGPAI---APFLPLL-RLKGKKVVVNMDGLEWKRA----KWGRPAKRYLKFG-----EKLAVKFA 144 (363)
T ss_pred HHHHhccCCeEEEEecCccH---HHHHHHH-HhcCCCEEEEccCcceeec----ccccchhHHHHHH-----HHHHHhhc
Confidence 11111224566666655322 2333333 3348899999998653211 0112222333444 78888899
Q ss_pred CEEEEeCHHHHHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcc
Q 011690 173 NGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTS 251 (479)
Q Consensus 173 d~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (479)
|.++++|+.+++.+.+.++.+..+|||| +...+.+. ......
T Consensus 145 d~ii~~s~~~~~~~~~~~~~~~~~i~ngv~~~~~~~~-----~~~~~~-------------------------------- 187 (363)
T cd04955 145 DRLIADSPGIKEYLKEKYGRDSTYIPYGADHVVSSEE-----DEILKK-------------------------------- 187 (363)
T ss_pred cEEEeCCHHHHHHHHHhcCCCCeeeCCCcChhhcchh-----hhhHHh--------------------------------
Confidence 9999999999999988888778999999 54444330 111111
Q ss_pred ccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC
Q 011690 252 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 331 (479)
Q Consensus 252 ~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G 331 (479)
.+..+ ++ .++++||+.+.||++.+++|++.+. ++++|+|+|+|
T Consensus 188 -----~~~~~-~~-~i~~~G~~~~~Kg~~~li~a~~~l~------------------------------~~~~l~ivG~~ 230 (363)
T cd04955 188 -----YGLEP-GR-YYLLVGRIVPENNIDDLIEAFSKSN------------------------------SGKKLVIVGNA 230 (363)
T ss_pred -----cCCCC-Cc-EEEEEecccccCCHHHHHHHHHhhc------------------------------cCceEEEEcCC
Confidence 11222 23 5789999999999999999998763 26999999999
Q ss_pred CChHHHHHHHH-HcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCC-CCCcHHHHHHHhCCCcEEEecCccchhc
Q 011690 332 PDKESYEEKIR-RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVSYSCIEEL 408 (479)
Q Consensus 332 ~~~~~l~~~~~-~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~llEama~G~PVIas~~~~~~e~ 408 (479)
+..+.+++.++ +++. ++|.|+|. ++.+++..++++||++++| +.. |++|++++|||+||+|||+|+.++..|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~V~~~g~-~~~~~~~~~~~~ad~~v~p---s~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~ 306 (363)
T cd04955 231 DHNTPYGKLLKEKAAADPRIIFVGP-IYDQELLELLRYAALFYLH---GHSVGGTNPSLLEAMAYGCPVLASDNPFNREV 306 (363)
T ss_pred CCcchHHHHHHHHhCCCCcEEEccc-cChHHHHHHHHhCCEEEeC---CccCCCCChHHHHHHHcCCCEEEecCCcccee
Confidence 77777777766 5666 78999997 9999999999999999998 444 8899999999999999999999999999
Q ss_pred cccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHH
Q 011690 409 VKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEE 464 (479)
Q Consensus 409 i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~ 464 (479)
+++ +|+++.+.+.+++++.++++ +++.+.+++.++++.. ..++|+..-++
T Consensus 307 ~~~--~g~~~~~~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~fs~~~~~~~ 357 (363)
T cd04955 307 LGD--KAIYFKVGDDLASLLEELEA----DPEEVSAMAKAARERIREKYTWEKIADQ 357 (363)
T ss_pred ecC--CeeEecCchHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 965 78888665559999999999 5788899999988754 24666554443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=292.89 Aligned_cols=360 Identities=16% Similarity=0.144 Sum_probs=241.0
Q ss_pred cCCC-CChhHHHHHH-HHHhh-CCCcEEEEecCCCCCc----------ccccCCCCeEEEEee-c-CCCCCCCCCchhHH
Q 011690 13 GDLG-RSPRMQYQAL-SLARQ-MSLEVDVVAYGGSKPH----------AAILEHPSIHIHTMT-Q-WPTIPRGLPKVLKP 77 (479)
Q Consensus 13 ~~~g-~~~r~~~~a~-~La~~-~G~eV~Vv~~~~~~~~----------~~~~~~~gi~i~~~~-~-~~~~~~~~~~~~~~ 77 (479)
++.| ++.|+.-.|. .|.+. .+|+|+|+|......+ -.+...++++++++. . ...+...+++
T Consensus 10 ~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~r---- 85 (419)
T cd03806 10 CNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEASTYPR---- 85 (419)
T ss_pred CCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccccCCc----
Confidence 4445 6777776654 34332 3899999997754322 012223567766652 1 1111222222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCch----hhhhhhhcCC-----
Q 011690 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG----YTLLSLSLGR----- 148 (479)
Q Consensus 78 ~~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~----~~~~~~~~~~----- 148 (479)
+..+...+..++..+..+. + .+|||++.+.+... +..+ ++...++|+|...| ++ ..+...+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~-~-~~pDv~i~~~g~~~-~~~~---~~~~~~~~~i~y~h-~P~~~~d~l~~~~~~~~~~~~ 158 (419)
T cd03806 86 FTLLGQALGSMILGLEALL-K-LVPDIFIDTMGYPF-TYPL---VRLLGGCPVGAYVH-YPTISTDMLQKVRSREASYNN 158 (419)
T ss_pred eeeHHHHHHHHHHHHHHHH-h-cCCCEEEEcCCccc-HHHH---HHHhcCCeEEEEec-CCcchHHHHHHHhhccccccC
Confidence 1122233333222222221 1 57999888874322 2222 23344889999999 33 1222222211
Q ss_pred -----Cch---hHHHHHHHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCC--eEEEecCC-CCCCCCCCChHHHHHHH
Q 011690 149 -----RSH---FVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELF 217 (479)
Q Consensus 149 -----~~~---~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~ 217 (479)
.+. ..+...+..+..++++..+.||.++++|+..++.+.+.++. ++.+|||+ +.+.|.+.+. .
T Consensus 159 ~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~----~-- 232 (419)
T cd03806 159 SATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPL----D-- 232 (419)
T ss_pred ccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhccccc----c--
Confidence 111 22333333355678999999999999999999999888766 58999998 5444433221 0
Q ss_pred HhhhhcccCCCCccccccccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhh
Q 011690 218 CRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAIL 297 (479)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~ 297 (479)
. ..+...++++||+.+.||++.+|+|+..+.++...
T Consensus 233 -----------------------------------------~-~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~-- 268 (419)
T cd03806 233 -----------------------------------------E-KTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPE-- 268 (419)
T ss_pred -----------------------------------------c-ccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcc--
Confidence 0 11224899999999999999999999999875000
Q ss_pred ccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC------ChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCE
Q 011690 298 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP------DKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADL 370 (479)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~------~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi 370 (479)
...++++|+|+|+|+ ..+.++++++++++ ++|.|+|. ++.+++..+|+.||+
T Consensus 269 --------------------~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~-v~~~~l~~~l~~adv 327 (419)
T cd03806 269 --------------------EIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVN-APFEELLEELSTASI 327 (419)
T ss_pred --------------------cccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecC-CCHHHHHHHHHhCeE
Confidence 001359999999874 34678888999999 69999997 999999999999999
Q ss_pred EEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc-chhccc---cCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 011690 371 GVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-IEELVK---VDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLR 446 (479)
Q Consensus 371 ~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~-~~e~i~---~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~ 446 (479)
++.| +..|+||++++||||||+|||+++.|| ..|+++ ++.+|++++|++++|++|.+++++ +++.++.++
T Consensus 328 ~v~~---s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~d~~~la~ai~~ll~~---~~~~~~~~~ 401 (419)
T cd03806 328 GLHT---MWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLASTAEEYAEAIEKILSL---SEEERLRIR 401 (419)
T ss_pred EEEC---CccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeCCHHHHHHHHHHHHhC---CHHHHHHHH
Confidence 9987 666899999999999999999999876 468888 899999999999999999999996 455666666
Q ss_pred HHHHHhhhhhchHH
Q 011690 447 NGTLEMGLSARWAT 460 (479)
Q Consensus 447 ~~~~~~~~~~~w~~ 460 (479)
+++++....++|+.
T Consensus 402 ~~~~~~~~~fs~~~ 415 (419)
T cd03806 402 RAARSSVKRFSDEE 415 (419)
T ss_pred HHHHHHHHhhCHHH
Confidence 66666445566643
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=297.38 Aligned_cols=314 Identities=14% Similarity=0.142 Sum_probs=212.1
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHh-----cCCcEEEEecCchhhh-hh---h-hcCCCchh--HHHHHHHhHHHHHHH
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSL-----RRSAFIVDWHNFGYTL-LS---L-SLGRRSHF--VSIYRCFSVLRIEKY 167 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~-----~~~~~ii~~h~~~~~~-~~---~-~~~~~~~~--~~~~~~~~~~~~e~~ 167 (479)
.+||+||+|. +.+.+++.+++.. .++|+|+|.|+..+.- .. . ..+..... .....++....+.+.
T Consensus 117 ~~pDiiH~h~---w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (466)
T PRK00654 117 PRPDIVHAHD---WHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKA 193 (466)
T ss_pred CCCceEEECC---cHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHH
Confidence 4899999998 5566666666544 3789999999975320 00 0 00000000 000000000122455
Q ss_pred HhhcCCEEEEeCHHHHHHHHHh-h-----------CCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccc
Q 011690 168 YGKMANGCLCVTQAMQHELAQN-W-----------GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 234 (479)
Q Consensus 168 ~~~~ad~vi~vS~~~~~~l~~~-~-----------~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (479)
..+.||.++++|+.+++++... + ..++.+|+|| |.+.|.|..... +..++...
T Consensus 194 ~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~---~~~~~~~~----------- 259 (466)
T PRK00654 194 GLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPL---LAANYSAD----------- 259 (466)
T ss_pred HHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcc---cccccChh-----------
Confidence 6688999999999999888652 2 1248999999 888887753110 00000000
Q ss_pred cccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhcc
Q 011690 235 SNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 314 (479)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (479)
-+++....... .+..+++++++..+++++||+.++||++.+++|++.+.+
T Consensus 260 ---~~~~k~~~k~~----l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~----------------------- 309 (466)
T PRK00654 260 ---DLEGKAENKRA----LQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE----------------------- 309 (466)
T ss_pred ---hhhchHHHHHH----HHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHh-----------------------
Confidence 00000000000 112334554233489999999999999999999998864
Q ss_pred CcccCCCCEEEEEEecCC--ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHh
Q 011690 315 GKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFG 392 (479)
Q Consensus 315 ~~~~~~p~~~l~IvG~G~--~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama 392 (479)
.+++|+|+|+|+ ..+.+++.+++++ .++.+.+. .+.+.+..+|++||++|+| |..|++|++++|||+
T Consensus 310 ------~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~g-~~~~~~~~~~~~aDv~v~P---S~~E~~gl~~lEAma 378 (466)
T PRK00654 310 ------QGGQLVLLGTGDPELEEAFRALAARYP-GKVGVQIG-YDEALAHRIYAGADMFLMP---SRFEPCGLTQLYALR 378 (466)
T ss_pred ------cCCEEEEEecCcHHHHHHHHHHHHHCC-CcEEEEEe-CCHHHHHHHHhhCCEEEeC---CCCCCchHHHHHHHH
Confidence 268999999986 3467888888876 35665433 3555678999999999999 778999999999999
Q ss_pred CCCcEEEecCccchhccccC------ccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHH
Q 011690 393 CGLPVCAVSYSCIEELVKVD------KNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 464 (479)
Q Consensus 393 ~G~PVIas~~~~~~e~i~~~------~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 464 (479)
||+|+|+++.||..|++.++ .+|+++ .|+++|+++|.++++.+. +++.+++++.++.+ ..++|+..-++
T Consensus 379 ~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~-~~~~~~~~~~~~~~--~~fsw~~~a~~ 455 (466)
T PRK00654 379 YGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYR-QPPLWRALQRQAMA--QDFSWDKSAEE 455 (466)
T ss_pred CCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHhc--cCCChHHHHHH
Confidence 99999999999999999888 899999 579999999999887432 46668888888865 37888877765
Q ss_pred HHHHHHHHHHh
Q 011690 465 HAKPLITEVIS 475 (479)
Q Consensus 465 ~~~~~~~~~~~ 475 (479)
...+++++++
T Consensus 456 -~~~lY~~~~~ 465 (466)
T PRK00654 456 -YLELYRRLLG 465 (466)
T ss_pred -HHHHHHHHhh
Confidence 3556666654
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-33 Score=279.97 Aligned_cols=324 Identities=15% Similarity=0.136 Sum_probs=225.5
Q ss_pred ChhHHHHHHHHHhh---CCCcEEEEecCCCCC-cccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 011690 18 SPRMQYQALSLARQ---MSLEVDVVAYGGSKP-HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (479)
Q Consensus 18 ~~r~~~~a~~La~~---~G~eV~Vv~~~~~~~-~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 93 (479)
.+|.+..+..+++. .||+|++++...... ........++++++++ .. . ......+..+.+.+.
T Consensus 11 ~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~-~---~~~~~~~~~~~~~~~------- 77 (358)
T cd03812 11 RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIP--AR-K---KNPLKYFKKLYKLIK------- 77 (358)
T ss_pred CccHHHHHHHHHHhcCccceEEEEEEeCCCCcchHHHHHHcCCeEEEec--CC-C---ccHHHHHHHHHHHHh-------
Confidence 34444444443333 599999999876432 1122334577777765 11 1 111122222222222
Q ss_pred HHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcE-EEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcC
Q 011690 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMA 172 (479)
Q Consensus 94 ~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~-ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~a 172 (479)
..+||+||+|++. ...+...+ .+..+.|. +++.|+..+... ........+++ ++.+.+.+
T Consensus 78 -----~~~~Dvv~~~~~~--~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~-----~~~~~~~~ 138 (358)
T cd03812 78 -----KNKYDIVHVHGSS--ASGFILLA-AKKAGVKVRIAHSHNTSDSHD------KKKKILKYKVL-----RKLINRLA 138 (358)
T ss_pred -----cCCCCEEEEeCcc--hhHHHHHH-HhhCCCCeEEEEecccccccc------ccchhhHHHHH-----HHHHHhcC
Confidence 2799999999954 22333333 33456665 556776542110 00000111223 66777889
Q ss_pred CEEEEeCHHHHHHHHHhh-CCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhc
Q 011690 173 NGCLCVTQAMQHELAQNW-GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 250 (479)
Q Consensus 173 d~vi~vS~~~~~~l~~~~-~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (479)
+.++++|+...+.+.+.. ..++.+|||| +.+.|.+.... +.. ...
T Consensus 139 ~~~i~~s~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~-~~~-~~~------------------------------- 185 (358)
T cd03812 139 TDYLACSEEAGKWLFGKVKNKKFKVIPNGIDLEKFIFNEEI-RKK-RRE------------------------------- 185 (358)
T ss_pred CEEEEcCHHHHHHHHhCCCcccEEEEeccCcHHHcCCCchh-hhH-HHH-------------------------------
Confidence 999999999998887642 2348999999 65556544321 111 111
Q ss_pred cccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEec
Q 011690 251 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 330 (479)
Q Consensus 251 ~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~ 330 (479)
.....+ +..|+++||+.+.||++.+++|+..+.++ .|+++|+|+|+
T Consensus 186 ------~~~~~~-~~~i~~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG~ 231 (358)
T cd03812 186 ------LGILED-KFVIGHVGRFSEQKNHEFLIEIFAELLKK---------------------------NPNAKLLLVGD 231 (358)
T ss_pred ------cCCCCC-CEEEEEEeccccccChHHHHHHHHHHHHh---------------------------CCCeEEEEEeC
Confidence 112233 45899999999999999999999999875 78999999999
Q ss_pred CCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhcc
Q 011690 331 GPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELV 409 (479)
Q Consensus 331 G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i 409 (479)
|+..+.+++.++++++ ++|.|+|. .+++.++|+.||++|+| |..|++|++++||||||+|||+|+.++.+|++
T Consensus 232 g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~p---s~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i 305 (358)
T cd03812 232 GELEEEIKKKVKELGLEDKVIFLGV---RNDVPELLQAMDVFLFP---SLYEGLPLVLIEAQASGLPCILSDTITKEVDL 305 (358)
T ss_pred CchHHHHHHHHHhcCCCCcEEEecc---cCCHHHHHHhcCEEEec---ccccCCCHHHHHHHHhCCCEEEEcCCchhhhh
Confidence 9999999999999988 78999997 88999999999999999 56689999999999999999999999999999
Q ss_pred ccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 011690 410 KVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 451 (479)
Q Consensus 410 ~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~ 451 (479)
.++ .|++. +++++++++|.++++ +++.+++++..+..
T Consensus 306 ~~~-~~~~~~~~~~~~~a~~i~~l~~----~~~~~~~~~~~~~~ 344 (358)
T cd03812 306 TDL-VKFLSLDESPEIWAEEILKLKS----EDRRERSSESIKKK 344 (358)
T ss_pred ccC-ccEEeCCCCHHHHHHHHHHHHh----Ccchhhhhhhhhhc
Confidence 884 45555 447999999999999 47777777766665
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=274.23 Aligned_cols=333 Identities=17% Similarity=0.183 Sum_probs=235.5
Q ss_pred CCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 011690 15 LGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (479)
Q Consensus 15 ~g~~~r~~~-~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 93 (479)
.|+.+.+.. .+..|.++ ||+|+|++....... ......++++++++. ............. ...
T Consensus 13 ~gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~------ 76 (357)
T cd03795 13 RGGIEQVIRDLAEGLAAR-GIEVAVLCASPEPKG-RDEERNGHRVIRAPS--LLNVASTPFSPSF------FKQ------ 76 (357)
T ss_pred CCcHHHHHHHHHHHHHhC-CCceEEEecCCCCcc-hhhhccCceEEEeec--ccccccccccHHH------HHH------
Confidence 444444432 34556664 999999997765433 222345667777762 1111000000000 000
Q ss_pred HHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCC
Q 011690 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMAN 173 (479)
Q Consensus 94 ~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad 173 (479)
+..+..+||+||+|.|..... ...+. ...+.|.++++|+..+. .......++++ ++.+.+.||
T Consensus 77 -~~~~~~~~Dii~~~~~~~~~~--~~~~~-~~~~~~~i~~~h~~~~~--------~~~~~~~~~~~-----~~~~~~~~d 139 (357)
T cd03795 77 -LKKLAKKADVIHLHFPNPLAD--LALLL-LPRKKPVVVHWHSDIVK--------QKLLLKLYRPL-----QRRFLRRAD 139 (357)
T ss_pred -HHhcCCCCCEEEEecCcchHH--HHHHH-hccCceEEEEEcChhhc--------cchhhhhhhHH-----HHHHHHhcC
Confidence 001237999999998643322 11122 22578999999975421 11233344444 777888999
Q ss_pred EEEEeCHHHHHHHHHhhC--CeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhc
Q 011690 174 GCLCVTQAMQHELAQNWG--IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 250 (479)
Q Consensus 174 ~vi~vS~~~~~~l~~~~~--~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (479)
.++++|+.+.+.+....+ .++.++||| +.+.|.+..... .. .
T Consensus 140 ~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~-~~---~------------------------------- 184 (357)
T cd03795 140 AIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALE-EA---I------------------------------- 184 (357)
T ss_pred EEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhh-hH---h-------------------------------
Confidence 999999999987766543 348999999 655565443211 00 0
Q ss_pred cccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEec
Q 011690 251 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 330 (479)
Q Consensus 251 ~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~ 330 (479)
... +.++..++++|++.+.||++.+++|++.+. +++|+|+|+
T Consensus 185 ------~~~-~~~~~~i~~~G~~~~~K~~~~li~a~~~l~-------------------------------~~~l~i~G~ 226 (357)
T cd03795 185 ------WRR-AAGRPFFLFVGRLVYYKGLDVLLEAAAALP-------------------------------DAPLVIVGE 226 (357)
T ss_pred ------hcC-CCCCcEEEEecccccccCHHHHHHHHHhcc-------------------------------CcEEEEEeC
Confidence 011 223358999999999999999999998762 699999999
Q ss_pred CCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhcc
Q 011690 331 GPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELV 409 (479)
Q Consensus 331 G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i 409 (479)
|+..+.+++.+++++. ++|.|.|. ++.+++..+++.||++++|+.. ..|++|++++|||+||+|||+++.++..+.+
T Consensus 227 g~~~~~~~~~~~~~~~~~~V~~~g~-v~~~~~~~~~~~ad~~i~ps~~-~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i 304 (357)
T cd03795 227 GPLEAELEALAAALGLLDRVRFLGR-LDDEEKAALLAACDVFVFPSVE-RSEAFGIVLLEAMAFGKPVISTEIGTGGSYV 304 (357)
T ss_pred ChhHHHHHHHHHhcCCcceEEEcCC-CCHHHHHHHHHhCCEEEeCCcc-cccccchHHHHHHHcCCCEEecCCCCchhHH
Confidence 9999999999988888 79999996 9999999999999999998432 4689999999999999999999999999988
Q ss_pred cc-CccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchH
Q 011690 410 KV-DKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWA 459 (479)
Q Consensus 410 ~~-~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~ 459 (479)
.+ +.+|+++ +|+++++++|.++++ +++.+++|++++++.. ..++|+
T Consensus 305 ~~~~~~g~~~~~~d~~~~~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~s~~ 354 (357)
T cd03795 305 NLHGVTGLVVPPGDPAALAEAIRRLLE----DPELRERLGEAARERAEEEFTAD 354 (357)
T ss_pred hhCCCceEEeCCCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHhcchH
Confidence 86 8999998 579999999999999 6899999999998853 344443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-32 Score=267.88 Aligned_cols=343 Identities=20% Similarity=0.229 Sum_probs=239.4
Q ss_pred EEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHH
Q 011690 7 ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLI 86 (479)
Q Consensus 7 ~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 86 (479)
+++++...-|....+...+..|.++ ||+|++++....... .....+++++.++. ... ... ....+.. +.
T Consensus 2 Il~i~~~~~g~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~-~~~-~~~~~~~----~~ 70 (359)
T cd03808 2 ILHIVTVDGGLYSFRLPLIKALRAA-GYEVHVVAPPGDELE--ELEALGVKVIPIPL--DRR-GIN-PFKDLKA----LL 70 (359)
T ss_pred eeEEEecchhHHHHHHHHHHHHHhc-CCeeEEEecCCCccc--ccccCCceEEeccc--ccc-ccC-hHhHHHH----HH
Confidence 3444444223333445566777675 999999997765432 33457888888872 210 111 1111111 11
Q ss_pred HHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHH-hcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHH
Q 011690 87 QFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIE 165 (479)
Q Consensus 87 ~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~-~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 165 (479)
++ ...+ +..+||+||+++. .....+.++++ ..+.+++.++|+..+.... ..........+ +
T Consensus 71 ~~----~~~~-~~~~~dvv~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~-----~ 132 (359)
T cd03808 71 RL----YRLL-RKERPDIVHTHTP---KPGILGRLAARLAGVPKVIYTVHGLGFVFTS-----GGLKRRLYLLL-----E 132 (359)
T ss_pred HH----HHHH-HhcCCCEEEEccc---cchhHHHHHHHHcCCCCEEEEecCcchhhcc-----chhHHHHHHHH-----H
Confidence 11 1111 2279999999973 22334444444 4556677778877532211 11122233333 7
Q ss_pred HHHhhcCCEEEEeCHHHHHHHHHhhCC----eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccC
Q 011690 166 KYYGKMANGCLCVTQAMQHELAQNWGI----KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGME 240 (479)
Q Consensus 166 ~~~~~~ad~vi~vS~~~~~~l~~~~~~----~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (479)
+...+.+|.++++|+.+.+.+.+.... .+.+++++ +.+.+.+....
T Consensus 133 ~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 183 (359)
T cd03808 133 RLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP----------------------------- 183 (359)
T ss_pred HHHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc-----------------------------
Confidence 888889999999999999998887543 25566776 44444332210
Q ss_pred CcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCC
Q 011690 241 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 320 (479)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (479)
.++++..++++|++.+.||++.++++++.+.++ .
T Consensus 184 -------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~---------------------------~ 217 (359)
T cd03808 184 -------------------IPEDDPVFLFVARLLKDKGIDELLEAARILKAK---------------------------G 217 (359)
T ss_pred -------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhc---------------------------C
Confidence 012345899999999999999999999998764 7
Q ss_pred CCEEEEEEecCCChHHHHHH-HHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEE
Q 011690 321 PRLLFIITGKGPDKESYEEK-IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 398 (479)
Q Consensus 321 p~~~l~IvG~G~~~~~l~~~-~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVI 398 (479)
++++|+|+|.|+..+..... +.+.+. ++|.|.|. .+++.++|++||++++| +..|++|++++|||+||+|||
T Consensus 218 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~i~p---s~~e~~~~~~~Ea~~~G~Pvi 291 (359)
T cd03808 218 PNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF---RDDVPELLAAADVFVLP---SYREGLPRVLLEAMAMGRPVI 291 (359)
T ss_pred CCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec---cccHHHHHHhccEEEec---CcccCcchHHHHHHHcCCCEE
Confidence 89999999999876665554 666666 78999997 88999999999999998 555899999999999999999
Q ss_pred EecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh-hhhhchHHHHH
Q 011690 399 AVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM-GLSARWATEWE 463 (479)
Q Consensus 399 as~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~~ 463 (479)
+++.++..|++.++.+|+++ +|+++++++|.++++ +++.++.+++++++. ...++|+...+
T Consensus 292 ~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~s~~~~~~ 355 (359)
T cd03808 292 ATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIE----DPELRARMGQAARKRAEEEFDEEIVVK 355 (359)
T ss_pred EecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 99999999999999999999 469999999999988 588899999998886 45666655443
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=272.05 Aligned_cols=339 Identities=20% Similarity=0.260 Sum_probs=234.1
Q ss_pred ChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 011690 18 SPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCV 97 (479)
Q Consensus 18 ~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~ 97 (479)
..++...+..|+++ ||+|++++.......... ...+.+...+.... ............+.+.+
T Consensus 17 ~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------------ 79 (364)
T cd03814 17 VRTLQRLVEHLRAR-GHEVLVIAPGPFRESEGP--ARVVPVPSVPLPGY--PEIRLALPPRRRVRRLL------------ 79 (364)
T ss_pred ehHHHHHHHHHHHC-CCEEEEEeCCchhhccCC--CCceeecccccCcc--cceEecccchhhHHHHH------------
Confidence 34555667777775 999999997654322111 12233322220000 00110011111122222
Q ss_pred hcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEE
Q 011690 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLC 177 (479)
Q Consensus 98 ~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 177 (479)
+..+||+||++++.. ....+..+++..++|+++++|+........ ..........+.+ ++.+.+.+|.+++
T Consensus 80 ~~~~pdii~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~d~i~~ 150 (364)
T cd03814 80 DAFAPDVVHIATPGP--LGLAALRAARRLGIPVVTSYHTDFPEYLRY--YGLGPLSWLAWAY-----LRWFHNRADRVLV 150 (364)
T ss_pred HhcCCCEEEEeccch--hhHHHHHHHHHcCCCEEEEEecChHHHhhh--cccchHhHhhHHH-----HHHHHHhCCEEEe
Confidence 227999999997532 233445556678899999999764222111 0111222222333 6777889999999
Q ss_pred eCHHHHHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccc
Q 011690 178 VTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 256 (479)
Q Consensus 178 vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
+|+.+.+.+.+....++.+++|| +.+.|.+..... ....+
T Consensus 151 ~s~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~------------------------------------- 191 (364)
T cd03814 151 PSPSLADELRARGFRRVRLWPRGVDTELFHPRRRDE--ALRAR------------------------------------- 191 (364)
T ss_pred CCHHHHHHHhccCCCceeecCCCccccccCcccccH--HHHHH-------------------------------------
Confidence 99999986655433348899999 666676553211 11111
Q ss_pred cccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHH
Q 011690 257 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 336 (479)
Q Consensus 257 ~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~ 336 (479)
++ ..++..++++|++.+.||++.++++++.+.+ . ++++|+|+|.|+..+.
T Consensus 192 ~~--~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~---------------------------~-~~~~l~i~G~~~~~~~ 241 (364)
T cd03814 192 LG--PPDRPVLLYVGRLAPEKNLEALLDADLPLRR---------------------------R-PPVRLVIVGDGPARAR 241 (364)
T ss_pred hC--CCCCeEEEEEeccccccCHHHHHHHHHHhhh---------------------------c-CCceEEEEeCCchHHH
Confidence 01 2234589999999999999999999999864 2 6899999999987666
Q ss_pred HHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEE
Q 011690 337 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL 416 (479)
Q Consensus 337 l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~ 416 (479)
++ ...++|.|.|. ++.+++..+|++||++++| +..+++|++++|||+||+|||+++.++..|+++++.+|+
T Consensus 242 ~~-----~~~~~v~~~g~-~~~~~~~~~~~~~d~~l~~---s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~ 312 (364)
T cd03814 242 LE-----ARYPNVHFLGF-LDGEELAAAYASADVFVFP---SRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGL 312 (364)
T ss_pred Hh-----ccCCcEEEEec-cCHHHHHHHHHhCCEEEEC---cccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceE
Confidence 55 11278999996 9999999999999999998 556889999999999999999999999999999999999
Q ss_pred Ee--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHH
Q 011690 417 LF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 464 (479)
Q Consensus 417 l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 464 (479)
++ .+.++++++|.++++ +++.++++++++.+....++|+...++
T Consensus 313 ~~~~~~~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (364)
T cd03814 313 LVEPGDAEAFAAALAALLA----DPELRRRMAARARAEAERRSWEAFLDN 358 (364)
T ss_pred EcCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 99 457889999999999 589999999999886656777666554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-32 Score=269.01 Aligned_cols=347 Identities=20% Similarity=0.206 Sum_probs=245.1
Q ss_pred eEEEEEecCCCCChhHH-HHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHH
Q 011690 6 RACVVVLGDLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (479)
Q Consensus 6 ~~~i~~~~~~g~~~r~~-~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 84 (479)
++.++.....|+.+++. ..+..|.+ .||+|.+++..............+++++.++. ... .........+.+.
T Consensus 2 i~~i~~~~~~gG~~~~~~~l~~~l~~-~~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~--~~~---~~~~~~~~~~~~~ 75 (365)
T cd03807 2 VLHVITGLDVGGAERMLVRLLKGLDR-DRFEHVVISLTDRGELGEELEEAGVPVYCLGK--RPG---RPDPGALLRLYKL 75 (365)
T ss_pred eEEEEeeccCccHHHHHHHHHHHhhh-ccceEEEEecCcchhhhHHHHhcCCeEEEEec--ccc---cccHHHHHHHHHH
Confidence 45555544445444433 33455555 49999999976543332333346888888872 111 1112222233333
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHh-cCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHH
Q 011690 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLR 163 (479)
Q Consensus 85 l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~-~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (479)
+.+ .+||+||++.+. ......++.+. .+.|++.+.|+..+... ........+.
T Consensus 76 ~~~------------~~~div~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~~---- 129 (365)
T cd03807 76 IRR------------LRPDVVHTWMYH---ADLYGGLAARLAGVPPVIWGIRHSDLDLG-------KKSTRLVARL---- 129 (365)
T ss_pred HHh------------hCCCEEEecccc---ccHHHHHHHHhcCCCcEEEEecCCccccc-------chhHhHHHHH----
Confidence 332 799999999743 23333344444 67888889998763210 1122223333
Q ss_pred HHHHHhhcCCEEEEeCHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCcccccccccc
Q 011690 164 IEKYYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGM 239 (479)
Q Consensus 164 ~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (479)
++.+.+.+|.++++|+.+.+.+.+. +.+ +.++||+ +...|.+.... +.....
T Consensus 130 -~~~~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~--------------------- 185 (365)
T cd03807 130 -RRLLSSFIPLIVANSAAAAEYHQAI-GYPPKKIVVIPNGVDTERFSPDLDA-RARLRE--------------------- 185 (365)
T ss_pred -HHHhccccCeEEeccHHHHHHHHHc-CCChhheeEeCCCcCHHhcCCcccc-hHHHHH---------------------
Confidence 6777788999999999999988774 443 7899999 65555544321 111111
Q ss_pred CCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccC
Q 011690 240 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 319 (479)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (479)
+++++++. .+++++|++.+.||++.+++|+..+.++
T Consensus 186 ----------------~~~~~~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~~--------------------------- 221 (365)
T cd03807 186 ----------------ELGLPEDT-FLIGIVARLHPQKDHATLLRAAALLLKK--------------------------- 221 (365)
T ss_pred ----------------hcCCCCCC-eEEEEecccchhcCHHHHHHHHHHHHHh---------------------------
Confidence 12343333 5899999999999999999999998875
Q ss_pred CCCEEEEEEecCCChHHHHHHHH-HcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcE
Q 011690 320 YPRLLFIITGKGPDKESYEEKIR-RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 397 (479)
Q Consensus 320 ~p~~~l~IvG~G~~~~~l~~~~~-~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PV 397 (479)
.++++|+|+|.|+..+.+++... ++++ ++|.|.|. .+++..+|+.||++++| +..+++|++++|||+||+||
T Consensus 222 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~p---s~~e~~~~~~~Ea~a~g~Pv 295 (365)
T cd03807 222 FPNARLLLVGDGPDRANLELLALKELGLEDKVILLGE---RSDVPALLNALDVFVLS---SLSEGFPNVLLEAMACGLPV 295 (365)
T ss_pred CCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEccc---cccHHHHHHhCCEEEeC---CccccCCcHHHHHHhcCCCE
Confidence 78999999999998888888877 7788 68999997 78999999999999998 55588999999999999999
Q ss_pred EEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHH
Q 011690 398 CAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEE 464 (479)
Q Consensus 398 Ias~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~ 464 (479)
|+++.++..|++.+ +|+++ ++++++++++.++++ +++.++++++++++.. ..++|+...++
T Consensus 296 I~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 359 (365)
T cd03807 296 VATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLA----DPALRQALGEAARERIEENFSIEAMVEA 359 (365)
T ss_pred EEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHh----ChHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 99999999999977 88888 579999999999999 5788888888887743 34666655543
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=275.80 Aligned_cols=266 Identities=22% Similarity=0.215 Sum_probs=211.6
Q ss_pred cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 99 ~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
..++|+||+|.+. ....+..+.++..++|++++.|+..... ... . +. ++...+.+|.++++
T Consensus 77 ~~~~Dii~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~----~~-----~~~~~~~~~~vi~~ 137 (355)
T cd03799 77 RLGIDHIHAHFGT--TPATVAMLASRLGGIPYSFTAHGKDIFR-------SPD-A----ID-----LDEKLARADFVVAI 137 (355)
T ss_pred hcCCCEEEECCCC--chHHHHHHHHHhcCCCEEEEEecccccc-------cCc-h----HH-----HHHHHhhCCEEEEC
Confidence 3789999999853 3344555566666899999998654110 000 0 22 55666889999999
Q ss_pred CHHHHHHHHHhhCC---eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 179 TQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 179 S~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
|+.+++.+.+.++. ++.++||+ +.+.|.+.. .
T Consensus 138 s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~-----~--------------------------------------- 173 (355)
T cd03799 138 SEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRP-----P--------------------------------------- 173 (355)
T ss_pred CHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCcc-----c---------------------------------------
Confidence 99999999887443 38999999 555554332 0
Q ss_pred cccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh
Q 011690 255 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 334 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~ 334 (479)
...+.+..++++|++.+.||++.+++|+..+.++ .++++|+++|.|+..
T Consensus 174 ----~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~---------------------------~~~~~l~i~G~~~~~ 222 (355)
T cd03799 174 ----PPPGEPLRILSVGRLVEKKGLDYLLEALALLKDR---------------------------GIDFRLDIVGDGPLR 222 (355)
T ss_pred ----cccCCCeEEEEEeeeccccCHHHHHHHHHHHhhc---------------------------CCCeEEEEEECCccH
Confidence 0112345899999999999999999999998764 689999999999999
Q ss_pred HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCC-C--CCCCcHHHHHHHhCCCcEEEecCccchhccc
Q 011690 335 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-S--GLDLPMKVVDMFGCGLPVCAVSYSCIEELVK 410 (479)
Q Consensus 335 ~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-~--~e~~p~~llEama~G~PVIas~~~~~~e~i~ 410 (479)
+.+++.++++++ ++|.|.|. ++.+++..+|++||++++|+..+ . .|++|++++|||+||+|||+++.++.+|+++
T Consensus 223 ~~~~~~~~~~~~~~~v~~~g~-~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~ 301 (355)
T cd03799 223 DELEALIAELGLEDRVTLLGA-KSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVE 301 (355)
T ss_pred HHHHHHHHHcCCCCeEEECCc-CChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhh
Confidence 999999999988 78999997 99999999999999999984331 1 1899999999999999999999999999999
Q ss_pred cCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHH
Q 011690 411 VDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWE 463 (479)
Q Consensus 411 ~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~ 463 (479)
++.+|+++ .|+++++++|.++++ +++.+..+++++++.. ..++|+...+
T Consensus 302 ~~~~g~~~~~~~~~~l~~~i~~~~~----~~~~~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 302 DGETGLLVPPGDPEALADAIERLLD----DPELRREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhcCHHHHhh
Confidence 99999999 379999999999999 5888999999998743 4577765543
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=290.86 Aligned_cols=304 Identities=16% Similarity=0.151 Sum_probs=211.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcC---CcEEEEecCchhhh-hh---hh-cCCCch-hH-HHHHHHhHHHHHHHHh
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR---SAFIVDWHNFGYTL-LS---LS-LGRRSH-FV-SIYRCFSVLRIEKYYG 169 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~---~~~ii~~h~~~~~~-~~---~~-~~~~~~-~~-~~~~~~~~~~~e~~~~ 169 (479)
.+||+||+|. +.+..++.+++...+ +|+|+|.|+..+.- .. .. .+.... +. ....++....+.+...
T Consensus 127 ~~~DiiH~hd---w~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 203 (473)
T TIGR02095 127 WQPDVVHAHD---WHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGI 203 (473)
T ss_pred CCCCEEEECC---cHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHH
Confidence 6899999999 566666666666554 89999999875311 00 00 000000 00 0000000112245667
Q ss_pred hcCCEEEEeCHHHHHHHHHh-hC-----------CeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccc
Q 011690 170 KMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSN 236 (479)
Q Consensus 170 ~~ad~vi~vS~~~~~~l~~~-~~-----------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (479)
+.||.+++||+.+++++... ++ .++.+|+|| |.+.|.|..... +.. +
T Consensus 204 ~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~---~~~-----------------~ 263 (473)
T TIGR02095 204 VYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPY---LKA-----------------N 263 (473)
T ss_pred HhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcc---ccc-----------------C
Confidence 88999999999999887642 11 248899999 778887643110 000 0
Q ss_pred cccCCcccccchhccccccccccCC--CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhcc
Q 011690 237 AGMEGQKADETIFTSLAGIDVFLKP--NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 314 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (479)
+.......+... ....+..++++. +.+ +|+++||+.++||++.+++|+..+.++
T Consensus 264 ~~~~~~~~k~~~-k~~l~~~~gl~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------- 319 (473)
T TIGR02095 264 YSADDLAGKAEN-KEALQEELGLPVDDDVP-LFGVISRLTQQKGVDLLLAALPELLEL---------------------- 319 (473)
T ss_pred cCccchhhhhhh-HHHHHHHcCCCccCCCC-EEEEEecCccccChHHHHHHHHHHHHc----------------------
Confidence 000000000000 000122334543 454 899999999999999999999998753
Q ss_pred CcccCCCCEEEEEEecCC--ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHh
Q 011690 315 GKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFG 392 (479)
Q Consensus 315 ~~~~~~p~~~l~IvG~G~--~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama 392 (479)
+++|+|+|+|+ ..+.+++.+++++ .++.|.+. .+.+++..+|++||++++| |..|++|++++|||+
T Consensus 320 -------~~~lvi~G~g~~~~~~~l~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aDv~l~p---S~~E~~gl~~lEAma 387 (473)
T TIGR02095 320 -------GGQLVVLGTGDPELEEALRELAERYP-GNVRVIIG-YDEALAHLIYAGADFILMP---SRFEPCGLTQLYAMR 387 (473)
T ss_pred -------CcEEEEECCCCHHHHHHHHHHHHHCC-CcEEEEEc-CCHHHHHHHHHhCCEEEeC---CCcCCcHHHHHHHHH
Confidence 49999999995 4566777776654 67888887 7888899999999999999 677999999999999
Q ss_pred CCCcEEEecCccchhccccC------ccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHH
Q 011690 393 CGLPVCAVSYSCIEELVKVD------KNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 464 (479)
Q Consensus 393 ~G~PVIas~~~~~~e~i~~~------~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 464 (479)
||+|||+++.||..|++.++ .+|+++ .|+++++++|.++++.+..+++.+++|++++.+ ..++|+..-++
T Consensus 388 ~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~ 465 (473)
T TIGR02095 388 YGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQ 465 (473)
T ss_pred CCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHH
Confidence 99999999999999999988 899999 579999999999888444358888999988865 36888776554
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=270.25 Aligned_cols=268 Identities=17% Similarity=0.205 Sum_probs=201.7
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHh-cCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~-~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+||+|.+. ...++.++++. .+.|++++.|+... ... ...+. .+...+.++.++++
T Consensus 78 ~~pdiv~~~~~~---~~~~~~l~~~~~~~~~~v~~~h~~~~---------~~~---~~~~~-----~~~~~~~~~~~~~~ 137 (360)
T cd04951 78 FKPDVVHAHMFH---ANIFARLLRLFLPSPPLICTAHSKNE---------GGR---LRMLA-----YRLTDFLSDLTTNV 137 (360)
T ss_pred cCCCEEEEcccc---hHHHHHHHHhhCCCCcEEEEeeccCc---------hhH---HHHHH-----HHHHhhccCceEEE
Confidence 799999999843 33444444443 46788889997641 111 11122 33444568888999
Q ss_pred CHHHHHHHHHhhCC---eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 179 TQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 179 S~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
|+...+++.+..+. ++.++||| +...|.+... .+.....
T Consensus 138 s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~-~~~~~~~------------------------------------ 180 (360)
T cd04951 138 SKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPA-RRLKIRN------------------------------------ 180 (360)
T ss_pred cHHHHHHHHhccCCCcccEEEEccccchhhcCcchH-HHHHHHH------------------------------------
Confidence 99999988876433 38899999 6566655432 1122111
Q ss_pred cccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh
Q 011690 255 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 334 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~ 334 (479)
++++.+++ .+++++|++.+.||++.+++|+..+.++ .|+++|+|+|+|+..
T Consensus 181 -~~~~~~~~-~~~l~~g~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~ 231 (360)
T cd04951 181 -ALGVKNDT-FVILAVGRLVEAKDYPNLLKAFAKLLSD---------------------------YLDIKLLIAGDGPLR 231 (360)
T ss_pred -HcCcCCCC-EEEEEEeeCchhcCcHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCCcH
Confidence 12333444 4899999999999999999999998775 789999999999999
Q ss_pred HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCc
Q 011690 335 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 413 (479)
Q Consensus 335 ~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~ 413 (479)
+.+++.++++++ ++|.|.|. .+++..+|+.||++++| |..|++|++++|||++|+|||+++.++..|++++
T Consensus 232 ~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~~---s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~-- 303 (360)
T cd04951 232 ATLERLIKALGLSNRVKLLGL---RDDIAAYYNAADLFVLS---SAWEGFGLVVAEAMACELPVVATDAGGVREVVGD-- 303 (360)
T ss_pred HHHHHHHHhcCCCCcEEEecc---cccHHHHHHhhceEEec---ccccCCChHHHHHHHcCCCEEEecCCChhhEecC--
Confidence 999999999888 68999998 68999999999999998 5668899999999999999999999999999976
Q ss_pred cEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHH
Q 011690 414 NGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 464 (479)
Q Consensus 414 ~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 464 (479)
+|+++ +|++++++++.+++++ +++.++.++++.......++|+...++
T Consensus 304 ~g~~~~~~~~~~~~~~i~~ll~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~ 353 (360)
T cd04951 304 SGLIVPISDPEALANKIDEILKM---SGEERDIIGARRERIVKKFSINSIVQQ 353 (360)
T ss_pred CceEeCCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 67766 7799999999999964 566666666553323346777655443
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=294.98 Aligned_cols=377 Identities=14% Similarity=0.112 Sum_probs=240.7
Q ss_pred HHhhCCC----cEEEEecCCCCC--------cccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH-
Q 011690 28 LARQMSL----EVDVVAYGGSKP--------HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF- 94 (479)
Q Consensus 28 La~~~G~----eV~Vv~~~~~~~--------~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~- 94 (479)
|++ .|| +|+|+|...... ...+...++++|+++|..+....-++++.. -..++.++..+...+..
T Consensus 300 La~-~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~-k~~l~p~l~~f~~~~~~~ 377 (784)
T TIGR02470 300 IKL-QGLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWIS-RFEIWPYLETFAEDAEKE 377 (784)
T ss_pred HHh-cCCCccceEEEEecCCCCccccccccccccccCCCceEEEEecCCCCcccccccccC-HHHHHHHHHHHHHHHHHH
Confidence 445 499 778999653311 112233479999999944321101111111 12233334433322222
Q ss_pred HHhh-cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCC-CchhHHHHHHHhHHHHHHHHhhcC
Q 011690 95 LCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRCFSVLRIEKYYGKMA 172 (479)
Q Consensus 95 l~~~-~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~a 172 (479)
+... ..+||+||+|. ..+..++..++...++|.+.+.|..+-.- ....+. .......++.-.....|......|
T Consensus 378 ~~~~~~~~pDlIHahy---~d~glva~lla~~lgVP~v~t~HsL~~~K-~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~A 453 (784)
T TIGR02470 378 ILAELQGKPDLIIGNY---SDGNLVASLLARKLGVTQCTIAHALEKTK-YPDSDIYWQEFEDKYHFSCQFTADLIAMNAA 453 (784)
T ss_pred HHHhcCCCCCEEEECC---CchHHHHHHHHHhcCCCEEEECCcchhhc-ccccccccccchhHHHhhhhhhHHHHHHhcC
Confidence 2212 25799999999 66777888889999999999999875211 000000 000001111110112366778889
Q ss_pred CEEEEeCHHHHHHH---HHhh----------------CC-----eEEEecCC-CCCCCCCCChHHHHH--HHHhhhhccc
Q 011690 173 NGCLCVTQAMQHEL---AQNW----------------GI-----KATVLYDQ-PPEFFHPTSLEEKHE--LFCRLNKILH 225 (479)
Q Consensus 173 d~vi~vS~~~~~~l---~~~~----------------~~-----~~~vi~n~-~~~~f~~~~~~~~~~--~~~~~~~~~~ 225 (479)
|.||+.|..+.... ...| |+ ++.+||+| |.+.|.|.....+.. +...+...
T Consensus 454 D~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~l-- 531 (784)
T TIGR02470 454 DFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEEL-- 531 (784)
T ss_pred CEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhh--
Confidence 99999997553311 1111 22 26899999 878787754322111 10000000
Q ss_pred CCCCccccccccccCCcccccchhccc-ccccccc--CCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCC
Q 011690 226 QPLGVQDCVSNAGMEGQKADETIFTSL-AGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 302 (479)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~ 302 (479)
.|..- .+..+++ .+++| +|+++||+.+.||++.|++|+..+.+.
T Consensus 532 ----------------------l~~~~~~~~~~G~l~d~~kp-iIl~VGRL~~~KGid~LIeA~~~l~~l---------- 578 (784)
T TIGR02470 532 ----------------------LFSLEDNDEHYGYLKDPNKP-IIFSMARLDRVKNLTGLVECYGRSPKL---------- 578 (784)
T ss_pred ----------------------ccchhhHHHHhCCCCCCCCc-EEEEEeCCCccCCHHHHHHHHHHhHhh----------
Confidence 00000 0011222 45666 899999999999999999999887542
Q ss_pred chhhhhHhhhccCcccCCCCEEEEEEecCCC------------hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHH---
Q 011690 303 TNEEVFLKEISDGKQYLYPRLLFIITGKGPD------------KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLG--- 366 (479)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~------------~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~--- 366 (479)
.+++.|+|+|+|+. .+.+.+.++++++ ++|.|+|...+..+..++|+
T Consensus 579 -----------------~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iA 641 (784)
T TIGR02470 579 -----------------RELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIA 641 (784)
T ss_pred -----------------CCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhh
Confidence 45789999997642 1356677888998 78999996236667777765
Q ss_pred -cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHH
Q 011690 367 -SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLK 443 (479)
Q Consensus 367 -~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~ 443 (479)
++|++|+| |..|+||++++||||||+|||||+.||+.|+|.++.+|+++ .|++++|++|.++++....|++.++
T Consensus 642 d~adVfV~P---S~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~ 718 (784)
T TIGR02470 642 DTKGIFVQP---ALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQ 718 (784)
T ss_pred ccCcEEEEC---CcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 34799999 77899999999999999999999999999999999999999 4699999999998742222789999
Q ss_pred HHHHHHHHhh-hhhchHHHHHHH
Q 011690 444 KLRNGTLEMG-LSARWATEWEEH 465 (479)
Q Consensus 444 ~~~~~~~~~~-~~~~w~~~~~~~ 465 (479)
+|++++++.. ..++|+...+++
T Consensus 719 ~ms~~a~~rV~~~FSW~~~A~~l 741 (784)
T TIGR02470 719 KISQGGLQRIYEKYTWKIYSERL 741 (784)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999988742 467776655543
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=262.80 Aligned_cols=276 Identities=24% Similarity=0.368 Sum_probs=214.0
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||++++... .....+.+..++|+++++|+..+..... ........... .++...+.+|.++++|
T Consensus 84 ~~~Dii~~~~~~~~---~~~~~~~~~~~~~~i~~~h~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~d~~i~~s 152 (374)
T cd03801 84 ERFDVVHAHDWLAL---LAAALAARLLGIPLVLTVHGLEFGRPGN---ELGLLLKLARA-----LERRALRRADRIIAVS 152 (374)
T ss_pred cCCcEEEEechhHH---HHHHHHHHhcCCcEEEEeccchhhcccc---chhHHHHHHHH-----HHHHHHHhCCEEEEec
Confidence 68999999995433 2222456677899999999876321110 00111122222 3777788999999999
Q ss_pred HHHHHHHHHhhCC---eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccc
Q 011690 180 QAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 255 (479)
Q Consensus 180 ~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (479)
+.+.+.+.+.++. ++.++||+ +...+.+.....+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------------------------------------- 192 (374)
T cd03801 153 EATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRR---------------------------------------- 192 (374)
T ss_pred HHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhh----------------------------------------
Confidence 9999999988776 48999999 655555432100000
Q ss_pred ccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChH
Q 011690 256 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 335 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~ 335 (479)
... ..+...++++|++.+.||++.+++|+..+.++ .++++|+|+|.|+..+
T Consensus 193 -~~~-~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~ 243 (374)
T cd03801 193 -LGI-PEDEPVILFVGRLVPRKGVDLLLEALAKLRKE---------------------------YPDVRLVIVGDGPLRE 243 (374)
T ss_pred -cCC-cCCCeEEEEecchhhhcCHHHHHHHHHHHhhh---------------------------cCCeEEEEEeCcHHHH
Confidence 011 22345899999999999999999999998875 6899999999999999
Q ss_pred HHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCcc
Q 011690 336 SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 414 (479)
Q Consensus 336 ~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~ 414 (479)
.+++.+++++. ++|.|.|. ++.+++..+++.||++++| +..+++|++++|||++|+|||+++.++..|++.++.+
T Consensus 244 ~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~~di~i~~---~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~ 319 (374)
T cd03801 244 ELEALAAELGLGDRVTFLGF-VPDEDLPALYAAADVFVLP---SLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGET 319 (374)
T ss_pred HHHHHHHHhCCCcceEEEec-cChhhHHHHHHhcCEEEec---chhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcc
Confidence 99998888888 78999997 9999999999999999999 4448899999999999999999999999999999999
Q ss_pred EEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hhhhhchHHHHH
Q 011690 415 GLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE-MGLSARWATEWE 463 (479)
Q Consensus 415 G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~w~~~~~ 463 (479)
|+++ .++++++++|.++++ +++.++++++++++ ....++|+...+
T Consensus 320 g~~~~~~~~~~l~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (374)
T cd03801 320 GLLVPPGDPEALAEAILRLLD----DPELRRRLGEAARERVAERFSWDRVAA 367 (374)
T ss_pred eEEeCCCCHHHHHHHHHHHHc----ChHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 9999 347999999999999 58888999888873 234566654433
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=261.83 Aligned_cols=316 Identities=21% Similarity=0.240 Sum_probs=224.8
Q ss_pred HHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 011690 24 QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPD 103 (479)
Q Consensus 24 ~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~D 103 (479)
.+..|++ .||+|+|++..... ........++++..++. ...............+.+.+. ..+||
T Consensus 22 l~~~L~~-~g~~v~v~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~------------~~~~d 85 (348)
T cd03820 22 LANALAE-KGHEVTIISLDKGE-PPFYELDPKIKVIDLGD--KRDSKLLARFKKLRRLRKLLK------------NNKPD 85 (348)
T ss_pred HHHHHHh-CCCeEEEEecCCCC-CCccccCCccceeeccc--ccccchhccccchHHHHHhhc------------ccCCC
Confidence 3555555 49999999987654 11222345677777662 111101111111222222222 27999
Q ss_pred EEEEeCCCCcchHHHHHHHHHhcCC-cEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHH
Q 011690 104 VFLVQNPPSVPTLVAVKWASSLRRS-AFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAM 182 (479)
Q Consensus 104 vI~~~~p~~~~~~~~~~~~~~~~~~-~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 182 (479)
+|+++.++ ....+.....+. |++++.|+...... .. ..... .++.+.+.+|.++++|+.+
T Consensus 86 ~i~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~--~~~~~-----~~~~~~~~~d~ii~~s~~~ 146 (348)
T cd03820 86 VVISFLTS-----LLTFLASLGLKIVKLIVSEHNSPDAYK-------KR--LRRLL-----LRRLLYRRADAVVVLTEED 146 (348)
T ss_pred EEEEcCch-----HHHHHHHHhhccccEEEecCCCccchh-------hh--hHHHH-----HHHHHHhcCCEEEEeCHHH
Confidence 99999954 112222333444 88888887652110 00 01111 2667778999999999999
Q ss_pred HHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCC
Q 011690 183 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 261 (479)
Q Consensus 183 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (479)
+.......+.++.++||+ +...+.+. ..
T Consensus 147 ~~~~~~~~~~~~~vi~~~~~~~~~~~~---------------------------------------------------~~ 175 (348)
T cd03820 147 RALYYKKFNKNVVVIPNPLPFPPEEPS---------------------------------------------------SD 175 (348)
T ss_pred HHHhhccCCCCeEEecCCcChhhcccc---------------------------------------------------CC
Confidence 733333334459999998 43332221 01
Q ss_pred CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHH
Q 011690 262 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 341 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~ 341 (479)
.....++++|++.+.||++.+++|++.+.++ .|+++|+|+|+|+..+.+++.+
T Consensus 176 ~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~---------------------------~~~~~l~i~G~~~~~~~~~~~~ 228 (348)
T cd03820 176 LKSKRILAVGRLVPQKGFDLLIEAWAKIAKK---------------------------HPDWKLRIVGDGPEREALEALI 228 (348)
T ss_pred CCCcEEEEEEeeccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEEeCCCCHHHHHHHH
Confidence 1234899999999999999999999998764 7899999999999999999999
Q ss_pred HHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc-cchhccccCccEEEe-
Q 011690 342 RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNGLLF- 418 (479)
Q Consensus 342 ~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~-~~~e~i~~~~~G~l~- 418 (479)
+++++ .+|.|.|. .+++..+|++||++++| +..|++|++++|||+||+|||+++.+ +..+++.++.+|+++
T Consensus 229 ~~~~~~~~v~~~g~---~~~~~~~~~~ad~~i~p---s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~ 302 (348)
T cd03820 229 KELGLEDRVILLGF---TKNIEEYYAKASIFVLT---SRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVP 302 (348)
T ss_pred HHcCCCCeEEEcCC---cchHHHHHHhCCEEEeC---ccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeC
Confidence 99988 68999997 89999999999999998 55688999999999999999999864 567788777799999
Q ss_pred -CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHH
Q 011690 419 -SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 462 (479)
Q Consensus 419 -~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 462 (479)
.|+++++++|.++++ +++.++.+++++++....++|+...
T Consensus 303 ~~~~~~~~~~i~~ll~----~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (348)
T cd03820 303 NGDVEALAEALLRLME----DEELRKRMGANARESAERFSIENII 343 (348)
T ss_pred CCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 467999999999998 6999999999988766667665543
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=275.43 Aligned_cols=259 Identities=15% Similarity=0.194 Sum_probs=193.6
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcE--EEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAF--IVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLC 177 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~--ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 177 (479)
.+||+||+|++ ....++.++++..+.|. +...|... .... ...+ .+ .+.+|.+++
T Consensus 83 ~~~Dii~~~~~---~~~~~~~~~~~~~~~~~~~~~~~h~~~----------~~~~---~~~~-----~~--~~~~d~~i~ 139 (359)
T PRK09922 83 TQPDIVICIDV---ISCLYANKARKKSGKQFKIFSWPHFSL----------DHKK---HAEC-----KK--ITCADYHLA 139 (359)
T ss_pred cCCCEEEEcCH---HHHHHHHHHHHHhCCCCeEEEEecCcc----------cccc---hhhh-----hh--hhcCCEEEE
Confidence 89999999984 33345556666666554 33445321 0000 0001 11 267999999
Q ss_pred eCHHHHHHHHHhhCCe---EEEecCC-CCCCCC-CCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccc
Q 011690 178 VTQAMQHELAQNWGIK---ATVLYDQ-PPEFFH-PTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSL 252 (479)
Q Consensus 178 vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (479)
+|+.+++.+.+. +.+ +.+|||+ +.+.|. +.+
T Consensus 140 ~S~~~~~~~~~~-~~~~~ki~vi~N~id~~~~~~~~~------------------------------------------- 175 (359)
T PRK09922 140 ISSGIKEQMMAR-GISAQRISVIYNPVEIKTIIIPPP------------------------------------------- 175 (359)
T ss_pred cCHHHHHHHHHc-CCCHHHEEEEcCCCCHHHccCCCc-------------------------------------------
Confidence 999999998764 654 8999999 433221 211
Q ss_pred cccccccCCCCCeEEEEEecCC--CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEec
Q 011690 253 AGIDVFLKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 330 (479)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~g~~~--~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~ 330 (479)
..+.+..++++||+. +.||++.+++|+..+ .++++|+|+|+
T Consensus 176 -------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~------------------------------~~~~~l~ivG~ 218 (359)
T PRK09922 176 -------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQT------------------------------TGEWQLHIIGD 218 (359)
T ss_pred -------ccCCCcEEEEEEEEecccCcCHHHHHHHHHhh------------------------------CCCeEEEEEeC
Confidence 011234789999986 469999999999876 23699999999
Q ss_pred CCChHHHHHHHHHcCC-CcEEEecCCCCc--chHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-Cccch
Q 011690 331 GPDKESYEEKIRRLRL-KRVAFRTMWLSA--EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIE 406 (479)
Q Consensus 331 G~~~~~l~~~~~~~~l-~~V~f~G~~~~~--~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~~~ 406 (479)
|++.+.+++.++++++ ++|.|+|. ++. +++.++|+.+|++|+| |..|+||++++||||||+|||+|+ .++..
T Consensus 219 g~~~~~l~~~~~~~~l~~~v~f~G~-~~~~~~~~~~~~~~~d~~v~~---s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~ 294 (359)
T PRK09922 219 GSDFEKCKAYSRELGIEQRIIWHGW-QSQPWEVVQQKIKNVSALLLT---SKFEGFPMTLLEAMSYGIPCISSDCMSGPR 294 (359)
T ss_pred CccHHHHHHHHHHcCCCCeEEEecc-cCCcHHHHHHHHhcCcEEEEC---CcccCcChHHHHHHHcCCCEEEeCCCCChH
Confidence 9999999999999998 68999996 643 7899999999999998 667899999999999999999999 89999
Q ss_pred hccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHH--HHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHh
Q 011690 407 ELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSD--VLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 407 e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 475 (479)
|++.++.+|+++ .|+++++++|.+++++ ++ ..+.++++++++. .+...+.+.++++.+.|
T Consensus 295 eiv~~~~~G~lv~~~d~~~la~~i~~l~~~----~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 295 DIIKPGLNGELYTPGNIDEFVGKLNKVISG----EVKYQHDAIPNSIERFY-----EVLYFKNLNNALFSKLQ 358 (359)
T ss_pred HHccCCCceEEECCCCHHHHHHHHHHHHhC----cccCCHHHHHHHHHHhh-----HHHHHHHHHHHHHHHhc
Confidence 999999999998 6799999999999995 44 3455666666643 23445566777776665
|
|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-31 Score=264.02 Aligned_cols=271 Identities=20% Similarity=0.223 Sum_probs=198.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHH---HhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWAS---SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCL 176 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~---~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi 176 (479)
.+||+||++....+........+. ...++|+|++.|+.... ... ....++ ++.+.+.+|.++
T Consensus 75 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-------~~~---~~~~~~-----~~~~~~~~d~ii 139 (366)
T cd03822 75 SGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLH-------EPR---PGDRAL-----LRLLLRRADAVI 139 (366)
T ss_pred cCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCcc-------ccc---hhhhHH-----HHHHHhcCCEEE
Confidence 799999998732222112222222 33789999999997200 011 112233 566778899999
Q ss_pred EeC-HHHHHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 177 CVT-QAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 177 ~vS-~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
++| +..++.+...+..++.++||+ +...+.+.... .. .
T Consensus 140 ~~s~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~----~---------------------------------- 179 (366)
T cd03822 140 VMSSELLRALLLRAYPEKIAVIPHGVPDPPAEPPESL--KA----L---------------------------------- 179 (366)
T ss_pred EeeHHHHHHHHhhcCCCcEEEeCCCCcCcccCCchhh--Hh----h----------------------------------
Confidence 996 444444333322469999999 54444333211 11 0
Q ss_pred cccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh
Q 011690 255 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 334 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~ 334 (479)
....+ ...++++|++.+.||++.+++|+..+.++ .|+++|+|+|+|+..
T Consensus 180 ---~~~~~-~~~i~~~G~~~~~K~~~~ll~a~~~~~~~---------------------------~~~~~l~i~G~~~~~ 228 (366)
T cd03822 180 ---GGLDG-RPVLLTFGLLRPYKGLELLLEALPLLVAK---------------------------HPDVRLLVAGETHPD 228 (366)
T ss_pred ---cCCCC-CeEEEEEeeccCCCCHHHHHHHHHHHHhh---------------------------CCCeEEEEeccCccc
Confidence 11122 35899999999999999999999999875 789999999988654
Q ss_pred HHHHH-----HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCC--CCcHHHHHHHhCCCcEEEecCccch
Q 011690 335 ESYEE-----KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL--DLPMKVVDMFGCGLPVCAVSYSCIE 406 (479)
Q Consensus 335 ~~l~~-----~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e--~~p~~llEama~G~PVIas~~~~~~ 406 (479)
..... +++++++ ++|.|.|.|++.+++..+|+.||++++| +..+ ++|++++|||+||+|||+++.++ .
T Consensus 229 ~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~p---s~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~ 304 (366)
T cd03822 229 LERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLP---YRSADQTQSGVLAYAIGFGKPVISTPVGH-A 304 (366)
T ss_pred hhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEec---ccccccccchHHHHHHHcCCCEEecCCCC-h
Confidence 43332 3788888 7899999779999999999999999999 5556 89999999999999999999999 6
Q ss_pred hccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHH
Q 011690 407 ELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 464 (479)
Q Consensus 407 e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 464 (479)
+.+.++.+|+++ .|+++++++|..+++ +++.++++++++++....++|+...++
T Consensus 305 ~~i~~~~~g~~~~~~d~~~~~~~l~~l~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~ 360 (366)
T cd03822 305 EEVLDGGTGLLVPPGDPAALAEAIRRLLA----DPELAQALRARAREYARAMSWERVAER 360 (366)
T ss_pred heeeeCCCcEEEcCCCHHHHHHHHHHHHc----ChHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 777788899998 569999999999999 588899999999887656777655443
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-31 Score=278.73 Aligned_cols=352 Identities=13% Similarity=0.098 Sum_probs=227.4
Q ss_pred CCCcceEEEEEecCC---CC-ChhHHHHHHHHHhhCC-CcEEEEecCCCCCc------------------ccccCCCCeE
Q 011690 1 MGRRGRACVVVLGDL---GR-SPRMQYQALSLARQMS-LEVDVVAYGGSKPH------------------AAILEHPSIH 57 (479)
Q Consensus 1 m~~~~~~~i~~~~~~---g~-~~r~~~~a~~La~~~G-~eV~Vv~~~~~~~~------------------~~~~~~~gi~ 57 (479)
|.+++++.|+..+.. ++ +--+...+..|+++ | |+|+||++...... ..+.++.+-+
T Consensus 1 ~~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~-G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~ 79 (462)
T PLN02846 1 MQKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKD-GDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEER 79 (462)
T ss_pred CCCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhc-CCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCe
Confidence 566778888886544 33 24456678889886 9 79999998543110 0011122345
Q ss_pred EEEeecCCCCCCCCCc-h------hHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcE
Q 011690 58 IHTMTQWPTIPRGLPK-V------LKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF 130 (479)
Q Consensus 58 i~~~~~~~~~~~~~~~-~------~~~~~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ 130 (479)
+.+++..+.+ .++. + ......+.+.+.. .+||+||+++|..+...-.+...++..+. +
T Consensus 80 v~r~~s~~~p--~yp~r~~~~~r~~~~~~~i~~~l~~------------~~pDVIHv~tP~~LG~~~~g~~~~~k~~~-v 144 (462)
T PLN02846 80 ISFLPKFSIK--FYPGKFSTDKRSILPVGDISETIPD------------EEADIAVLEEPEHLTWYHHGKRWKTKFRL-V 144 (462)
T ss_pred EEEecccccc--cCcccccccccccCChHHHHHHHHh------------cCCCEEEEcCchhhhhHHHHHHHHhcCCc-E
Confidence 6666632221 1221 0 0011223333333 79999999998655432113333333343 6
Q ss_pred EEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhh-cCCEEEEeCHHHHHHHHHhhCCeEEEecCC-CCCCCCCC
Q 011690 131 IVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGK-MANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPT 208 (479)
Q Consensus 131 ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~ 208 (479)
|.++|.......... + ..........+ +.+++.+ ++|.+++.|..+++ +.+. ..+..+| +.++|.+.
T Consensus 145 V~tyHT~y~~Y~~~~-~-~g~~~~~l~~~----~~~~~~r~~~d~vi~pS~~~~~-l~~~----~i~~v~GVd~~~f~~~ 213 (462)
T PLN02846 145 IGIVHTNYLEYVKRE-K-NGRVKAFLLKY----INSWVVDIYCHKVIRLSAATQD-YPRS----IICNVHGVNPKFLEIG 213 (462)
T ss_pred EEEECCChHHHHHHh-c-cchHHHHHHHH----HHHHHHHHhcCEEEccCHHHHH-HhhC----EEecCceechhhcCCC
Confidence 668997432211100 0 00111111111 1333322 38999999987766 4332 3334578 77788766
Q ss_pred ChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCCCC-CeEEEEEecCCCCCCHHHHHHHHH
Q 011690 209 SLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNR-PALVVSSTSWTPDEDFGILLEAAL 287 (479)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~g~~~~~K~~~~lieA~~ 287 (479)
....+.. ....+. ...++|+||+.++||++.||+|++
T Consensus 214 ~~~~~~~------------------------------------------~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~ 251 (462)
T PLN02846 214 KLKLEQQ------------------------------------------KNGEQAFTKGAYYIGKMVWSKGYKELLKLLH 251 (462)
T ss_pred cccHhhh------------------------------------------cCCCCCcceEEEEEecCcccCCHHHHHHHHH
Confidence 4221110 001111 126889999999999999999999
Q ss_pred HhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHc
Q 011690 288 MYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 367 (479)
Q Consensus 288 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~ 367 (479)
.+.++ .|+++|+|+|+||+++.+++.+++++++...|.|. .+ ..++++.
T Consensus 252 ~l~~~---------------------------~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~-~~---~~~~~~~ 300 (462)
T PLN02846 252 KHQKE---------------------------LSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGR-DH---ADPLFHD 300 (462)
T ss_pred HHHhh---------------------------CCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCC-CC---HHHHHHh
Confidence 98765 78999999999999999999999998854347775 43 3479999
Q ss_pred CCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 011690 368 ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRN 447 (479)
Q Consensus 368 adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~ 447 (479)
+|+||+| |..|++|++++||||||+|||+++.++ .+++.++.+|++++|.+++++++.+++++ +++ .++.
T Consensus 301 ~DvFv~p---S~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~~~~~~a~ai~~~l~~---~~~---~~~~ 370 (462)
T PLN02846 301 YKVFLNP---STTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYDDGKGFVRATLKALAE---EPA---PLTD 370 (462)
T ss_pred CCEEEEC---CCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecCCHHHHHHHHHHHHcc---Cch---hHHH
Confidence 9999999 778999999999999999999999987 49999999999999999999999999985 232 2233
Q ss_pred HHHHhhhhhchHHHHHHH
Q 011690 448 GTLEMGLSARWATEWEEH 465 (479)
Q Consensus 448 ~~~~~~~~~~w~~~~~~~ 465 (479)
.+++ .++|+...++.
T Consensus 371 ~a~~---~~SWe~~~~~l 385 (462)
T PLN02846 371 AQRH---ELSWEAATERF 385 (462)
T ss_pred HHHH---hCCHHHHHHHH
Confidence 3444 67777666553
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-31 Score=280.40 Aligned_cols=310 Identities=14% Similarity=0.146 Sum_probs=210.8
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHH--hcCCcEEEEecCchhhh-hhh----hcCCCchhHH--HHHHHhHHHHHHHHhh
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTL-LSL----SLGRRSHFVS--IYRCFSVLRIEKYYGK 170 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~--~~~~~~ii~~h~~~~~~-~~~----~~~~~~~~~~--~~~~~~~~~~e~~~~~ 170 (479)
.+|||||+|. +.+.++..+++. ..++|+|+|.|+..+.- ... ..+....... ...++......+...+
T Consensus 132 ~~pDIiH~Hd---w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVPDIVHAHD---WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCCCEEEECC---cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 6899999999 655665555543 24679999999975321 000 0000000000 0011000112556678
Q ss_pred cCCEEEEeCHHHHHHHHHhh------------CCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCcccccccc
Q 011690 171 MANGCLCVTQAMQHELAQNW------------GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA 237 (479)
Q Consensus 171 ~ad~vi~vS~~~~~~l~~~~------------~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (479)
.||.|+++|+..++++.+.+ ..++.+|+|| |.+.|.|..... +..++.
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~---~~~~~~---------------- 269 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDEL---IAATYD---------------- 269 (485)
T ss_pred hcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccch---hhhcCC----------------
Confidence 89999999999999887532 1248999999 878887754211 000000
Q ss_pred ccCCcccccchhccccccccccCCC-CCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCc
Q 011690 238 GMEGQKADETIFTSLAGIDVFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 316 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (479)
...-..+. .-....+..++++.+ ...+++++||+.++||++.+++|+..+.+
T Consensus 270 -~~~~~~k~-~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~------------------------- 322 (485)
T PRK14099 270 -VETLAARA-ANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG------------------------- 322 (485)
T ss_pred -hhHHHhHH-HhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh-------------------------
Confidence 00000000 000001123345432 22378899999999999999999998864
Q ss_pred ccCCCCEEEEEEecCC--ChHHHHHHHHHcCCCcE-EEecCCCCcchHHHHH-HcCCEEEEcccCCCCCCCcHHHHHHHh
Q 011690 317 QYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRV-AFRTMWLSAEDYPLLL-GSADLGVCLHTSSSGLDLPMKVVDMFG 392 (479)
Q Consensus 317 ~~~~p~~~l~IvG~G~--~~~~l~~~~~~~~l~~V-~f~G~~~~~~~~~~~l-~~adi~v~p~~~s~~e~~p~~llEama 392 (479)
.+++|+|+|+|+ ..+.+++++++++ .++ .|+|. .+++..+| ++||++|+| |..|+||++++|||+
T Consensus 323 ----~~~~lvivG~G~~~~~~~l~~l~~~~~-~~v~~~~G~---~~~l~~~~~a~aDifv~P---S~~E~fGl~~lEAma 391 (485)
T PRK14099 323 ----EGAQLALLGSGDAELEARFRAAAQAYP-GQIGVVIGY---DEALAHLIQAGADALLVP---SRFEPCGLTQLCALR 391 (485)
T ss_pred ----cCcEEEEEecCCHHHHHHHHHHHHHCC-CCEEEEeCC---CHHHHHHHHhcCCEEEEC---CccCCCcHHHHHHHH
Confidence 268999999986 3567777777764 444 78997 88999987 569999999 677999999999999
Q ss_pred CCCcEEEecCccchhccccC---------ccEEEe--CCHHHHHHHHHH---HHhcCCCCHHHHHHHHHHHHHhhhhhch
Q 011690 393 CGLPVCAVSYSCIEELVKVD---------KNGLLF--SSSSELADQLLM---LFKGFPDDSDVLKKLRNGTLEMGLSARW 458 (479)
Q Consensus 393 ~G~PVIas~~~~~~e~i~~~---------~~G~l~--~~~~~la~~l~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~w 458 (479)
||+|+|+++.||.+|+|.++ .+|+++ .|+++|+++|.+ +++ +++.+++|++++.+ ..++|
T Consensus 392 ~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~----d~~~~~~l~~~~~~--~~fSw 465 (485)
T PRK14099 392 YGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFA----DPVAWRRLQRNGMT--TDVSW 465 (485)
T ss_pred CCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHhhh--hcCCh
Confidence 99988889999999999775 689999 579999999997 555 68899999998865 47899
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 011690 459 ATEWEEHAKPLITEVISQ 476 (479)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~ 476 (479)
+..-+++ ..++.+++.+
T Consensus 466 ~~~a~~y-~~lY~~l~~~ 482 (485)
T PRK14099 466 RNPAQHY-AALYRSLVAE 482 (485)
T ss_pred HHHHHHH-HHHHHHHHhh
Confidence 8887654 5677776654
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=261.27 Aligned_cols=279 Identities=19% Similarity=0.232 Sum_probs=206.6
Q ss_pred cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 99 ~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
..++|+||+++++......+.. ..+..++|++++.|+....... ......+.... ...++...+.++.++++
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~~i~~~ 156 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAAR-AARKYGIPYVVSPHGMLDPWAL----PHKALKKRLAW---FLFERRLLQAAAAVHAT 156 (375)
T ss_pred CCCCCEEEEecccchHHHHHHH-HHHHhCCCEEEEcccccccccc----ccchhhhHHHH---HHHHHHHHhcCCEEEEC
Confidence 3689999999865444443333 3345689999999976422110 01111111111 12266677889999999
Q ss_pred CHHHHHHHHHhh-CCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccc
Q 011690 179 TQAMQHELAQNW-GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 256 (479)
Q Consensus 179 S~~~~~~l~~~~-~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
|+.......... ..++.++||+ +.+.|.+...... ...
T Consensus 157 s~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~------------------------------------- 196 (375)
T cd03821 157 SEQEAAEIRRLGLKAPIAVIPNGVDIPPFAALPSRGR---RRK------------------------------------- 196 (375)
T ss_pred CHHHHHHHHhhCCcccEEEcCCCcChhccCcchhhhh---hhh-------------------------------------
Confidence 977776665542 2348999999 6666655432111 111
Q ss_pred cccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC--Ch
Q 011690 257 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DK 334 (479)
Q Consensus 257 ~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~--~~ 334 (479)
.....++ ..++++|++.+.||++.+++|+..+.++ +++++|+++|.|+ ..
T Consensus 197 ~~~~~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~~~~~~ 248 (375)
T cd03821 197 FPILPDK-RIILFLGRLHPKKGLDLLIEAFAKLAER---------------------------FPDWHLVIAGPDEGGYR 248 (375)
T ss_pred ccCCCCC-cEEEEEeCcchhcCHHHHHHHHHHhhhh---------------------------cCCeEEEEECCCCcchH
Confidence 1223334 4899999999999999999999999875 7899999999764 34
Q ss_pred HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCc
Q 011690 335 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 413 (479)
Q Consensus 335 ~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~ 413 (479)
+.++..++++++ ++|.|+|. ++.+++..+|++||++++| +..|++|++++|||+||+|||+++.++..|++.+ .
T Consensus 249 ~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~ 323 (375)
T cd03821 249 AELKQIAAALGLEDRVTFTGM-LYGEDKAAALADADLFVLP---SHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-G 323 (375)
T ss_pred HHHHHHHHhcCccceEEEcCC-CChHHHHHHHhhCCEEEec---cccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-C
Confidence 455555678888 78999996 9999999999999999998 6568999999999999999999999999999988 8
Q ss_pred cEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh-hhhhchHHHH
Q 011690 414 NGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM-GLSARWATEW 462 (479)
Q Consensus 414 ~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~w~~~~ 462 (479)
+|++. .+.++++++|.++++ +++.++.+++++++. ...++|+..-
T Consensus 324 ~~~~~~~~~~~~~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~s~~~~~ 370 (375)
T cd03821 324 CGWVVDDDVDALAAALRRALE----LPQRLKAMGENGRALVEERFSWTAIA 370 (375)
T ss_pred ceEEeCCChHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 89998 456999999999999 578899999998885 4566665443
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-31 Score=279.39 Aligned_cols=234 Identities=17% Similarity=0.217 Sum_probs=185.5
Q ss_pred HHHHHHhhcCCEEEEeCHHHHHHHHHhhCCe--EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCcccccccccc
Q 011690 163 RIEKYYGKMANGCLCVTQAMQHELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGM 239 (479)
Q Consensus 163 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~--~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (479)
.++++..+.||.++++|+..++.+.+.|+.+ +.++||+ +.+.|...+..
T Consensus 212 ~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~~---------------------------- 263 (463)
T PLN02949 212 WMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPLE---------------------------- 263 (463)
T ss_pred HHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCcc----------------------------
Confidence 3577777899999999999999998877653 7889998 43333211100
Q ss_pred CCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccC
Q 011690 240 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 319 (479)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (479)
..+++ ..++++||+.++||++.+|+|+..+.+++. ..
T Consensus 264 -------------------~~~~~-~~il~vGR~~~~Kg~~llI~A~~~l~~~~~-----------------------~~ 300 (463)
T PLN02949 264 -------------------RSEDP-PYIISVAQFRPEKAHALQLEAFALALEKLD-----------------------AD 300 (463)
T ss_pred -------------------ccCCC-CEEEEEEeeeccCCHHHHHHHHHHHHHhcc-----------------------cc
Confidence 01222 378999999999999999999998865311 12
Q ss_pred CCCEEEEEEecCCC------hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHh
Q 011690 320 YPRLLFIITGKGPD------KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFG 392 (479)
Q Consensus 320 ~p~~~l~IvG~G~~------~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama 392 (479)
.|+++|+|+|+|+. .+++++.++++++ ++|.|+|. ++.+++..+|+.||+++.| +..|+||++++|||+
T Consensus 301 ~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~-v~~~el~~ll~~a~~~v~~---s~~E~FGivvlEAMA 376 (463)
T PLN02949 301 VPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKN-VSYRDLVRLLGGAVAGLHS---MIDEHFGISVVEYMA 376 (463)
T ss_pred CCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCC-CCHHHHHHHHHhCcEEEeC---CccCCCChHHHHHHH
Confidence 57899999998743 2568889999999 68999997 9999999999999999987 678999999999999
Q ss_pred CCCcEEEecCccc-hhcccc---CccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHH
Q 011690 393 CGLPVCAVSYSCI-EELVKV---DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKP 468 (479)
Q Consensus 393 ~G~PVIas~~~~~-~e~i~~---~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 468 (479)
||+|||+++.||. .|++.+ +.+|++++|++++|++|.+++++ +++.+++|++++++....++|+...++. .+
T Consensus 377 ~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~~~~~la~ai~~ll~~---~~~~r~~m~~~ar~~~~~FS~e~~~~~~-~~ 452 (463)
T PLN02949 377 AGAVPIAHNSAGPKMDIVLDEDGQQTGFLATTVEEYADAILEVLRM---RETERLEIAAAARKRANRFSEQRFNEDF-KD 452 (463)
T ss_pred cCCcEEEeCCCCCcceeeecCCCCcccccCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHcCHHHHHHHH-HH
Confidence 9999999998886 477765 67899999999999999999985 5788889999988876678887766553 33
Q ss_pred HHHHHHh
Q 011690 469 LITEVIS 475 (479)
Q Consensus 469 ~~~~~~~ 475 (479)
.+++++.
T Consensus 453 ~i~~l~~ 459 (463)
T PLN02949 453 AIRPILN 459 (463)
T ss_pred HHHHHHh
Confidence 4444443
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-31 Score=271.15 Aligned_cols=269 Identities=16% Similarity=0.177 Sum_probs=194.4
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+|++.. ..+ ..+.+..++|+|+++|..... .. ...++ + .+.+.+.+|.+++.|
T Consensus 84 ~~~Dvv~~h~~~~---~~~-~~~~~~~~~~~i~~~H~~~~~--------~~--~~~~~-~-----~~~~~~~~d~~i~~~ 143 (372)
T cd03792 84 LDADVVVIHDPQP---LAL-PLFKKKRGRPWIWRCHIDLSS--------PN--RRVWD-F-----LQPYIEDYDAAVFHL 143 (372)
T ss_pred CCCCEEEECCCCc---hhH-HHhhhcCCCeEEEEeeeecCC--------Cc--HHHHH-H-----HHHHHHhCCEEeecH
Confidence 6899999999642 111 222233488989899975311 11 11222 2 234556789988877
Q ss_pred HHHHHHHHHhhCCeEEEecCC-CCCC-CC-CCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccc
Q 011690 180 QAMQHELAQNWGIKATVLYDQ-PPEF-FH-PTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 256 (479)
Q Consensus 180 ~~~~~~l~~~~~~~~~vi~n~-~~~~-f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
.. .....++.+..++||| +... +. +...........+
T Consensus 144 ~~---~~~~~~~~~~~vipngvd~~~~~~~~~~~~~~~~~~~~------------------------------------- 183 (372)
T cd03792 144 PE---YVPPQVPPRKVIIPPSIDPLSGKNRELSPADIEYILEK------------------------------------- 183 (372)
T ss_pred HH---hcCCCCCCceEEeCCCCCCCccccCCCCHHHHHHHHHH-------------------------------------
Confidence 32 2222223234499999 5432 21 1122222222222
Q ss_pred cccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh--
Q 011690 257 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-- 334 (479)
Q Consensus 257 ~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~-- 334 (479)
+++.++++ +++++||+.+.||++.+++|++.+.++ .|+++|+|+|+|+..
T Consensus 184 ~~~~~~~~-~i~~vgrl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~ 235 (372)
T cd03792 184 YGIDPERP-YITQVSRFDPWKDPFGVIDAYRKVKER---------------------------VPDPQLVLVGSGATDDP 235 (372)
T ss_pred hCCCCCCc-EEEEEeccccccCcHHHHHHHHHHHhh---------------------------CCCCEEEEEeCCCCCCc
Confidence 23445555 899999999999999999999998764 689999999999653
Q ss_pred ---HHHHHHHHHcCC-CcEEEecCCC--CcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhc
Q 011690 335 ---ESYEEKIRRLRL-KRVAFRTMWL--SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEEL 408 (479)
Q Consensus 335 ---~~l~~~~~~~~l-~~V~f~G~~~--~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~ 408 (479)
+.+++..++.++ ++|.|.|. . +.+++..+|++||++++| |..|+||++++|||+||+|||+|+.++..++
T Consensus 236 ~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~ad~~v~~---s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~ 311 (372)
T cd03792 236 EGWIVYEEVLEYAEGDPDIHVLTL-PPVSDLEVNALQRASTVVLQK---SIREGFGLTVTEALWKGKPVIAGPVGGIPLQ 311 (372)
T ss_pred hhHHHHHHHHHHhCCCCCeEEEec-CCCCHHHHHHHHHhCeEEEeC---CCccCCCHHHHHHHHcCCCEEEcCCCCchhh
Confidence 234555545666 68999996 5 789999999999999998 6789999999999999999999999999999
Q ss_pred cccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHH
Q 011690 409 VKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEE 464 (479)
Q Consensus 409 i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~ 464 (479)
+.++.+|+++++.++++++|.++++ +++.+++|++++++.. ..++|+..-++
T Consensus 312 i~~~~~g~~~~~~~~~a~~i~~ll~----~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 364 (372)
T cd03792 312 IEDGETGFLVDTVEEAAVRILYLLR----DPELRRKMGANAREHVRENFLITRHLKD 364 (372)
T ss_pred cccCCceEEeCCcHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 9999999999999999999999998 5889999999998853 46777655443
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-30 Score=286.00 Aligned_cols=314 Identities=16% Similarity=0.176 Sum_probs=214.9
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHH------hcCCcEEEEecCchhhhhh----hh-cCCC-chh---HHHHHHHhHHHH
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASS------LRRSAFIVDWHNFGYTLLS----LS-LGRR-SHF---VSIYRCFSVLRI 164 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~------~~~~~~ii~~h~~~~~~~~----~~-~~~~-~~~---~~~~~~~~~~~~ 164 (479)
.+|||||+|+ +.+.+++.++.. ..++|+|+|+|+..|.-.. +. .+-. ..+ ..+-..+ ..++
T Consensus 609 ~~PDIIH~HD---W~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~-~~~i 684 (977)
T PLN02939 609 KKPDIIHCHD---WQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNA-HGRI 684 (977)
T ss_pred CCCCEEEECC---ccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhcc-CCch
Confidence 6899999999 666554322221 2468999999998642100 00 0000 000 0000000 0001
Q ss_pred --HHHHhhcCCEEEEeCHHHHHHHHHhhC-----------CeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCc
Q 011690 165 --EKYYGKMANGCLCVTQAMQHELAQNWG-----------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGV 230 (479)
Q Consensus 165 --e~~~~~~ad~vi~vS~~~~~~l~~~~~-----------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (479)
-+.-...||.|++||+..++++...+| .++.+|+|| |.+.|.|..... +...+...
T Consensus 685 N~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~---L~~~Ys~~------- 754 (977)
T PLN02939 685 NVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRF---LKVQYNAN------- 754 (977)
T ss_pred HHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccc---cccccChh-------
Confidence 122223699999999999999876332 137899999 888888764110 00000000
Q ss_pred cccccccccCCcccccchhccccccccccCC---CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhh
Q 011690 231 QDCVSNAGMEGQKADETIFTSLAGIDVFLKP---NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEV 307 (479)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~ 307 (479)
+ +.+-...... .+..+++++ +.| +|+++||+.++||++.+++|+..+.+
T Consensus 755 -d------l~GK~~nK~a----LRkelGL~~~d~d~p-LIg~VGRL~~QKGiDlLleA~~~Ll~---------------- 806 (977)
T PLN02939 755 -D------LQGKAANKAA----LRKQLGLSSADASQP-LVGCITRLVPQKGVHLIRHAIYKTAE---------------- 806 (977)
T ss_pred -h------hhhhhhhhHH----HHHHhCCCcccccce-EEEEeecCCcccChHHHHHHHHHHhh----------------
Confidence 0 0000000000 223455653 345 89999999999999999999987753
Q ss_pred hHhhhccCcccCCCCEEEEEEecCCCh---HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCC
Q 011690 308 FLKEISDGKQYLYPRLLFIITGKGPDK---ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDL 383 (479)
Q Consensus 308 ~~~~~~~~~~~~~p~~~l~IvG~G~~~---~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~ 383 (479)
++++|+|+|+|+.. +.+++.+++++. ++|.|+|. ++.+....+|++||++|+| |..|+|
T Consensus 807 -------------~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~-~de~lah~IYAaADIFLmP---Sr~EPf 869 (977)
T PLN02939 807 -------------LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILK-YDEALSHSIYAASDMFIIP---SMFEPC 869 (977)
T ss_pred -------------cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEec-cCHHHHHHHHHhCCEEEEC---CCccCC
Confidence 36899999999763 677888888887 68999997 7777778999999999999 778999
Q ss_pred cHHHHHHHhCCCcEEEecCccchhcccc---------CccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 384 PMKVVDMFGCGLPVCAVSYSCIEELVKV---------DKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 384 p~~llEama~G~PVIas~~~~~~e~i~~---------~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
|++++|||+||+|+|+++.||..|+|.+ +.+|+++ .|+++|+++|.+++..+..+++.++.|+.++..
T Consensus 870 GLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~- 948 (977)
T PLN02939 870 GLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN- 948 (977)
T ss_pred cHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH-
Confidence 9999999999999999999999998865 5789999 579999999999887444468899999887654
Q ss_pred hhhhchHHHHHHHHHHHHHHHHh
Q 011690 453 GLSARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 453 ~~~~~w~~~~~~~~~~~~~~~~~ 475 (479)
..++|+...++ ...+|.+++.
T Consensus 949 -~dFSWe~~A~q-YeeLY~~ll~ 969 (977)
T PLN02939 949 -IDFSWDSSASQ-YEELYQRAVA 969 (977)
T ss_pred -hcCCHHHHHHH-HHHHHHHHHH
Confidence 47899888765 3466666654
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-31 Score=263.86 Aligned_cols=272 Identities=21% Similarity=0.262 Sum_probs=206.7
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||++++..... +..++|+|+++|+..+....... .......++.+ ++...+.+|.++++|
T Consensus 84 ~~~Dii~~~~~~~~~~--------~~~~~~~i~~~hd~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~d~~i~~s 148 (365)
T cd03809 84 LGLDLLHSPHNTAPLL--------RLRGVPVVVTIHDLIPLRFPEYF--SPGFRRYFRRL-----LRRALRRADAIITVS 148 (365)
T ss_pred cCCCeeeecccccCcc--------cCCCCCEEEEeccchhhhCcccC--CHHHHHHHHHH-----HHHHHHHcCEEEEcc
Confidence 7899999999543322 56789999999987532111000 11112233333 777888999999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 255 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (479)
+.+++.+.+.++.+ +.++||+ +...+.+..... . .+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--~--~~~----------------------------------- 189 (365)
T cd03809 149 EATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE--V--LRA----------------------------------- 189 (365)
T ss_pred HHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHH--H--HHH-----------------------------------
Confidence 99999999887743 8999999 655555543211 0 010
Q ss_pred ccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC-h
Q 011690 256 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-K 334 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~-~ 334 (479)
....+ +..++++|++.+.||++.+++|+..+.++ .++++|+++|.++. .
T Consensus 190 --~~~~~-~~~i~~~G~~~~~K~~~~~l~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~ 239 (365)
T cd03809 190 --LYLLP-RPYFLYVGTIEPRKNLERLLEAFARLPAK---------------------------GPDPKLVIVGKRGWLN 239 (365)
T ss_pred --hcCCC-CCeEEEeCCCccccCHHHHHHHHHHHHHh---------------------------cCCCCEEEecCCcccc
Confidence 11223 34899999999999999999999999875 66899999997643 3
Q ss_pred HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCc
Q 011690 335 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 413 (479)
Q Consensus 335 ~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~ 413 (479)
+...+.+++++. ++|.++|. ++.+++..+|++||++++| +..|++|.+++|||++|+|||+++.++..|++. .
T Consensus 240 ~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~~d~~l~p---s~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~ 313 (365)
T cd03809 240 EELLARLRELGLGDRVRFLGY-VSDEELAALYRGARAFVFP---SLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--D 313 (365)
T ss_pred HHHHHHHHHcCCCCeEEECCC-CChhHHHHHHhhhhhhccc---chhccCCCCHHHHhcCCCcEEecCCCCccceec--C
Confidence 334444456677 78999996 9999999999999999998 556889999999999999999999999999984 4
Q ss_pred cEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHH
Q 011690 414 NGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEH 465 (479)
Q Consensus 414 ~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 465 (479)
+|+++ .++++++++|.++++ +++.+..+++++++....++|+...++.
T Consensus 314 ~~~~~~~~~~~~~~~~i~~l~~----~~~~~~~~~~~~~~~~~~~sw~~~~~~~ 363 (365)
T cd03809 314 AALYFDPLDPEALAAAIERLLE----DPALREELRERGLARAKRFSWEKTARRT 363 (365)
T ss_pred ceeeeCCCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 57766 679999999999988 6999999999998766678777666544
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-30 Score=256.24 Aligned_cols=271 Identities=24% Similarity=0.327 Sum_probs=207.5
Q ss_pred cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 99 ~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
..+||+|+++.+ .+...+.....+..++|++++.|+....... .. ...+.. ++...+.+|.++++
T Consensus 91 ~~~~dii~~~~~--~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~------~~--~~~~~~-----~~~~~~~~d~ii~~ 155 (377)
T cd03798 91 RFRPDLIHAHFA--YPDGFAAALLKRKLGIPLVVTLHGSDVNLLP------RK--RLLRAL-----LRRALRRADAVIAV 155 (377)
T ss_pred cCCCCEEEEecc--chHHHHHHHHHHhcCCCEEEEeecchhcccC------ch--hhHHHH-----HHHHHhcCCeEEeC
Confidence 379999999963 3344455556667788999999987522110 00 122333 66777899999999
Q ss_pred CHHHHHHHHHh--hCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccc
Q 011690 179 TQAMQHELAQN--WGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 255 (479)
Q Consensus 179 S~~~~~~l~~~--~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (479)
|+.+++.+.+. .+.++.+++|+ +...|.+...... .++
T Consensus 156 s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~----------------------------------- 196 (377)
T cd03798 156 SEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEA----RKL----------------------------------- 196 (377)
T ss_pred CHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHH----Hhc-----------------------------------
Confidence 99999999886 34459999999 6666665542211 110
Q ss_pred ccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChH
Q 011690 256 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 335 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~ 335 (479)
.. .+.+..++++|++.+.||++.+++|++.+.++ +++++|+|+|.|+..+
T Consensus 197 --~~-~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~---------------------------~~~~~l~i~g~~~~~~ 246 (377)
T cd03798 197 --GL-PEDKKVILFVGRLVPRKGIDYLIEALARLLKK---------------------------RPDVHLVIVGDGPLRE 246 (377)
T ss_pred --cC-CCCceEEEEeccCccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEEcCCcchH
Confidence 11 22345899999999999999999999998764 7899999999999999
Q ss_pred HHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCcc
Q 011690 336 SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 414 (479)
Q Consensus 336 ~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~ 414 (479)
.+++.++++++ ++|.+.|. ++.+++..++++||++++| +..+++|.+++|||+||+|||+++.++..|++.++.+
T Consensus 247 ~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~~---~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~ 322 (377)
T cd03798 247 ALEALAAELGLEDRVTFLGA-VPHEEVPAYYAAADVFVLP---SLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGEN 322 (377)
T ss_pred HHHHHHHhcCCcceEEEeCC-CCHHHHHHHHHhcCeeecc---hhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcc
Confidence 99999998888 78999997 9999999999999999998 5458899999999999999999999999999999999
Q ss_pred EEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHH
Q 011690 415 GLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 462 (479)
Q Consensus 415 G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 462 (479)
|+++ .++++++++|.+++++ ++. +...++.......++|+...
T Consensus 323 g~~~~~~~~~~l~~~i~~~~~~----~~~-~~~~~~~~~~~~~~s~~~~~ 367 (377)
T cd03798 323 GLLVPPGDPEALAEAILRLLAD----PWL-RLGRAARRRVAERFSWENVA 367 (377)
T ss_pred eeEECCCCHHHHHHHHHHHhcC----cHH-HHhHHHHHHHHHHhhHHHHH
Confidence 9998 5799999999999995 443 22223333323355555443
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-30 Score=286.93 Aligned_cols=379 Identities=14% Similarity=0.116 Sum_probs=239.5
Q ss_pred HHHHhhCCCcE----EEEecCCCCC--------cccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 011690 26 LSLARQMSLEV----DVVAYGGSKP--------HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (479)
Q Consensus 26 ~~La~~~G~eV----~Vv~~~~~~~--------~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 93 (479)
..|+++ ||+| +|+|..-... ...+...++++|.++|.++.. ..+++... -..++.++..+...+.
T Consensus 322 ~~l~~~-G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~-~~l~~~i~-ke~l~p~L~~f~~~~~ 398 (815)
T PLN00142 322 LRIKQQ-GLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEK-GILRKWIS-RFDVWPYLETFAEDAA 398 (815)
T ss_pred HHHHhc-CCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCc-cccccccC-HHHHHHHHHHHHHHHH
Confidence 455564 9987 4888632211 112333468999999944311 11211111 1233334444332222
Q ss_pred -HHHhh-cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCC-CchhHHHHHHHhHHHHHHHHhh
Q 011690 94 -FLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRCFSVLRIEKYYGK 170 (479)
Q Consensus 94 -~l~~~-~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~ 170 (479)
.+... ..+||+||.|. +.+..++..++...|+|.+.+.|..+-.-.. ..+. .......++.-.....|.....
T Consensus 399 ~~~~~~~~~~PDlIHaHY---wdsg~vA~~La~~lgVP~v~T~HsL~k~K~~-~~~~~~~~~e~~y~~~~r~~aE~~a~~ 474 (815)
T PLN00142 399 SEILAELQGKPDLIIGNY---SDGNLVASLLAHKLGVTQCTIAHALEKTKYP-DSDIYWKKFDDKYHFSCQFTADLIAMN 474 (815)
T ss_pred HHHHHhcCCCCCEEEECC---ccHHHHHHHHHHHhCCCEEEEcccchhhhcc-ccCCcccccchhhhhhhchHHHHHHHH
Confidence 22111 24699999998 6777888888999999999999987511100 0000 0000111111111124778888
Q ss_pred cCCEEEEeCHHHHHH-------HHHhh------------CC-----eEEEecCC-CCCCCCCCChHHHHHHHHhhhhccc
Q 011690 171 MANGCLCVTQAMQHE-------LAQNW------------GI-----KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILH 225 (479)
Q Consensus 171 ~ad~vi~vS~~~~~~-------l~~~~------------~~-----~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~ 225 (479)
.||.||+.|...... +.... |+ ++.+|++| |...|.|-....+. + ..+....
T Consensus 475 ~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~r-l-~~l~n~I- 551 (815)
T PLN00142 475 HADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKR-L-TSLHPSI- 551 (815)
T ss_pred hhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhh-H-Hhhcccc-
Confidence 999999999777642 11210 22 37899999 77777765422111 0 0000000
Q ss_pred CCCCccccccccccCCcccccchhccc-ccccccc--CCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCC
Q 011690 226 QPLGVQDCVSNAGMEGQKADETIFTSL-AGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 302 (479)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~ 302 (479)
....|..- .+..++. .+++| +|+++||+.+.||++.||+|+..+.+.
T Consensus 552 -------------------~~~l~~~~~~~e~lg~l~~~~kp-vIl~VGRL~~~KGid~LIeA~a~l~~l---------- 601 (815)
T PLN00142 552 -------------------EELLYSPEQNDEHIGYLKDRKKP-IIFSMARLDRVKNLTGLVEWYGKNKRL---------- 601 (815)
T ss_pred -------------------hhhcCChHHHHHHhCCccCCCCc-EEEEEecCcccCCHHHHHHHHHHHHHh----------
Confidence 00000000 0011222 34455 899999999999999999999988654
Q ss_pred chhhhhHhhhccCcccCCCCEEEEEEecCC------Ch------HHHHHHHHHcCC-CcEEEecCC---CCcchHHHHHH
Q 011690 303 TNEEVFLKEISDGKQYLYPRLLFIITGKGP------DK------ESYEEKIRRLRL-KRVAFRTMW---LSAEDYPLLLG 366 (479)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~------~~------~~l~~~~~~~~l-~~V~f~G~~---~~~~~~~~~l~ 366 (479)
.++++|+|+|+|. +. +.+.+.++++++ ++|.|+|.. .+.+++..+++
T Consensus 602 -----------------~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~ia 664 (815)
T PLN00142 602 -----------------RELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIA 664 (815)
T ss_pred -----------------CCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHH
Confidence 6789999999872 11 236678888999 789999851 23356677666
Q ss_pred -cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHH
Q 011690 367 -SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLK 443 (479)
Q Consensus 367 -~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~ 443 (479)
++|++|+| |..|+||++++||||||+|||||+.||+.|+|.++.+|+++ .|++++|++|.++++..-.|++.++
T Consensus 665 daaDVfVlP---S~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~ 741 (815)
T PLN00142 665 DTKGAFVQP---ALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWN 741 (815)
T ss_pred hhCCEEEeC---CcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 57999999 77899999999999999999999999999999999999999 4699999999876642122799999
Q ss_pred HHHHHHHHhh-hhhchHHHHHH
Q 011690 444 KLRNGTLEMG-LSARWATEWEE 464 (479)
Q Consensus 444 ~~~~~~~~~~-~~~~w~~~~~~ 464 (479)
+|++++++.. ..++|+..-++
T Consensus 742 ~mg~~Ar~rv~e~FSWe~~A~r 763 (815)
T PLN00142 742 KISDAGLQRIYECYTWKIYAER 763 (815)
T ss_pred HHHHHHHHHHHHhCCHHHHHHH
Confidence 9999988743 45666554433
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=279.39 Aligned_cols=276 Identities=18% Similarity=0.212 Sum_probs=211.2
Q ss_pred cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhh--hhcC--CCchhHHHHHHHhHHHHHHHHhhcCCE
Q 011690 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS--LSLG--RRSHFVSIYRCFSVLRIEKYYGKMANG 174 (479)
Q Consensus 99 ~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~e~~~~~~ad~ 174 (479)
..++|++|+|+++ ...+++.++++..++|+|++.|+....-.. .... ....+.+.+..+ +..+++..++.||.
T Consensus 171 ~~~~dviH~~s~~--~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~ad~ 247 (475)
T cd03813 171 LPKADVYHAVSTG--YAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRF-FESLGRLAYQAADR 247 (475)
T ss_pred CCCCCEEeccCcc--hHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHH-HHHHHHHHHHhCCE
Confidence 4689999999853 234555667778899999999986421100 0000 011112222222 34458888899999
Q ss_pred EEEeCHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhc
Q 011690 175 CLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 250 (479)
Q Consensus 175 vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (479)
++++|+..++.+.+ +|.+ +.+|||| +.+.|.+.... .
T Consensus 248 Ii~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~---~----------------------------------- 288 (475)
T cd03813 248 ITTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRA---R----------------------------------- 288 (475)
T ss_pred EEecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCcccc---c-----------------------------------
Confidence 99999999887654 4654 8999999 66666554310 0
Q ss_pred cccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEec
Q 011690 251 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 330 (479)
Q Consensus 251 ~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~ 330 (479)
. .+.+.+|+++||+.+.||++.+|+|++.+.++ .|+++|+|+|.
T Consensus 289 --------~-~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~IvG~ 332 (475)
T cd03813 289 --------P-EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK---------------------------IPDAEGWVIGP 332 (475)
T ss_pred --------c-CCCCcEEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEECC
Confidence 1 12235899999999999999999999999875 89999999999
Q ss_pred CCC----hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccc
Q 011690 331 GPD----KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 405 (479)
Q Consensus 331 G~~----~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~ 405 (479)
|+. .+++++.++++++ ++|.|+| .+++.++|+++|++|+| |..|++|++++||||||+|||+|+.|+.
T Consensus 333 g~~~~~~~~e~~~li~~l~l~~~V~f~G----~~~v~~~l~~aDv~vlp---S~~Eg~p~~vlEAma~G~PVVatd~g~~ 405 (475)
T cd03813 333 TDEDPEYAEECRELVESLGLEDNVKFTG----FQNVKEYLPKLDVLVLT---SISEGQPLVILEAMAAGIPVVATDVGSC 405 (475)
T ss_pred CCcChHHHHHHHHHHHHhCCCCeEEEcC----CccHHHHHHhCCEEEeC---chhhcCChHHHHHHHcCCCEEECCCCCh
Confidence 853 3566778888998 7999999 57899999999999998 6678999999999999999999999999
Q ss_pred hhcccc------CccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHH
Q 011690 406 EELVKV------DKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWE 463 (479)
Q Consensus 406 ~e~i~~------~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~ 463 (479)
.|++.+ |.+|+++ .|+++++++|.++++ +++.++++++++++.. ..++|+...+
T Consensus 406 ~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~----~~~~~~~~~~~a~~~v~~~~s~~~~~~ 468 (475)
T cd03813 406 RELIEGADDEALGPAGEVVPPADPEALARAILRLLK----DPELRRAMGEAGRKRVERYYTLERMID 468 (475)
T ss_pred HHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 999988 5699998 579999999999999 5899999999998743 2345554443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-30 Score=287.01 Aligned_cols=294 Identities=15% Similarity=0.136 Sum_probs=204.8
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHh------cCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSL------RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMAN 173 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~------~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad 173 (479)
.+|||||+|. +.+.+++.+++.. .++|+|+|+|+..+.. + . + +.....||
T Consensus 708 ~~PDIIHaHD---W~talva~llk~~~~~~~~~~~p~V~TiHnl~~~~--------n----~---l------k~~l~~AD 763 (1036)
T PLN02316 708 FHPDIIHCHD---WSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEFGA--------N----H---I------GKAMAYAD 763 (1036)
T ss_pred CCCCEEEECC---ChHHHHHHHHHHhhhhhccCCCCEEEEeCCcccch--------h----H---H------HHHHHHCC
Confidence 5899999998 5566666565542 4689999999875210 0 0 1 12336799
Q ss_pred EEEEeCHHHHHHHHHhhC-----CeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccc
Q 011690 174 GCLCVTQAMQHELAQNWG-----IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADET 247 (479)
Q Consensus 174 ~vi~vS~~~~~~l~~~~~-----~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (479)
.|++||+..++++..... .++.+|+|| |.+.|.|........ ++.. .+... +-.....
T Consensus 764 ~ViTVS~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~---~y~~--------~~~~~-----gK~~~k~ 827 (1036)
T PLN02316 764 KATTVSPTYSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPV---PYTS--------ENVVE-----GKRAAKE 827 (1036)
T ss_pred EEEeCCHHHHHHHHhccCcccccCCEEEEECCccccccCCcccccccc---cCCc--------hhhhh-----hhhhhHH
Confidence 999999999999877533 238999999 877776642100000 0000 00000 0000000
Q ss_pred hhccccccccccCC-CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEE
Q 011690 248 IFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 326 (479)
Q Consensus 248 ~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~ 326 (479)
. .+..++++. +.| +++++||+.++||++.|++|+..+.+ ++++|+
T Consensus 828 ~----Lr~~lGL~~~d~p-lVg~VGRL~~qKGvdlLi~Al~~ll~-----------------------------~~~qlV 873 (1036)
T PLN02316 828 A----LQQRLGLKQADLP-LVGIITRLTHQKGIHLIKHAIWRTLE-----------------------------RNGQVV 873 (1036)
T ss_pred H----HHHHhCCCcccCe-EEEEEeccccccCHHHHHHHHHHHhh-----------------------------cCcEEE
Confidence 0 122345553 455 89999999999999999999998753 268999
Q ss_pred EEecCCC---hHHHHHHHHHcCC---CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe
Q 011690 327 ITGKGPD---KESYEEKIRRLRL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 400 (479)
Q Consensus 327 IvG~G~~---~~~l~~~~~~~~l---~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas 400 (479)
|+|+||+ .+.++++++++++ ++|.|.|. .+......+|++||++|+| |..|++|++++|||+||+|+|++
T Consensus 874 IvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~-~de~lah~iyaaADiflmP---S~~EP~GLvqLEAMa~GtppVvs 949 (1036)
T PLN02316 874 LLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLT-YDEPLSHLIYAGADFILVP---SIFEPCGLTQLTAMRYGSIPVVR 949 (1036)
T ss_pred EEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEec-CCHHHHHHHHHhCcEEEeC---CcccCccHHHHHHHHcCCCeEEE
Confidence 9999976 4577888888865 47999987 4333335899999999999 77899999999999999999999
Q ss_pred cCccchhccccC-------------ccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHH
Q 011690 401 SYSCIEELVKVD-------------KNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEH 465 (479)
Q Consensus 401 ~~~~~~e~i~~~-------------~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 465 (479)
+.||++|+|.++ .+|+++ .++++|+.+|.+++..+++.+..+..+++++.+ ..++|+..-.++
T Consensus 950 ~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~--~dFSW~~~A~~Y 1027 (1036)
T PLN02316 950 KTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVME--QDWSWNRPALDY 1027 (1036)
T ss_pred cCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH--hhCCHHHHHHHH
Confidence 999999999874 689999 469999999999998644334444444444332 368887776553
Q ss_pred HHHHHHHHH
Q 011690 466 AKPLITEVI 474 (479)
Q Consensus 466 ~~~~~~~~~ 474 (479)
..+|.++.
T Consensus 1028 -~~LY~~a~ 1035 (1036)
T PLN02316 1028 -MELYHSAR 1035 (1036)
T ss_pred -HHHHHHHh
Confidence 45665543
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-30 Score=273.35 Aligned_cols=303 Identities=17% Similarity=0.152 Sum_probs=205.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHh------cCCcEEEEecCchhhh----hhhh-cCCCc-hhHHH--HHHHhHHHHH
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSL------RRSAFIVDWHNFGYTL----LSLS-LGRRS-HFVSI--YRCFSVLRIE 165 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~------~~~~~ii~~h~~~~~~----~~~~-~~~~~-~~~~~--~~~~~~~~~e 165 (479)
.+||+||+|+ +.+..+..+++.. .++|+|+|.|+..+.- .... .+... ..... ..+......+
T Consensus 128 ~~pDviH~hd---~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (476)
T cd03791 128 WKPDIIHCHD---WHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFL 204 (476)
T ss_pred CCCcEEEECc---hHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHH
Confidence 6899999999 4555555555444 4899999999975311 0000 00000 00000 0000011336
Q ss_pred HHHhhcCCEEEEeCHHHHHHHHHh---------h---CCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccc
Q 011690 166 KYYGKMANGCLCVTQAMQHELAQN---------W---GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQD 232 (479)
Q Consensus 166 ~~~~~~ad~vi~vS~~~~~~l~~~---------~---~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (479)
+...+.||.++++|+.+++.+.+. . ..++.+|+|| +.+.|.|........ .+...
T Consensus 205 ~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~---~~~~~--------- 272 (476)
T cd03791 205 KAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPA---NYSAD--------- 272 (476)
T ss_pred HHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhh---cCCcc---------
Confidence 777789999999999999887641 1 2348999999 778887653211000 00000
Q ss_pred cccccccCCcccccchhccccccccccC--CCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHh
Q 011690 233 CVSNAGMEGQKADETIFTSLAGIDVFLK--PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK 310 (479)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~ 310 (479)
... .+ ..-....+..++++ ++.+ +++++||+.++||++.+++|+..+.++
T Consensus 273 -----~~~---~~-~~~k~~l~~~~g~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~------------------ 324 (476)
T cd03791 273 -----DLE---GK-AENKAALQEELGLPVDPDAP-LFGFVGRLTEQKGIDLLLEALPELLEL------------------ 324 (476)
T ss_pred -----ccc---cH-HHHHHHHHHHcCCCcCCCCC-EEEEEeeccccccHHHHHHHHHHHHHc------------------
Confidence 000 00 00000011223342 4555 899999999999999999999988753
Q ss_pred hhccCcccCCCCEEEEEEecCCC--hHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHH
Q 011690 311 EISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV 388 (479)
Q Consensus 311 ~~~~~~~~~~p~~~l~IvG~G~~--~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~ll 388 (479)
+++|+|+|+|+. .+.+++.++++ .++|.|.+. .+.+++..+|+.||++++| |..|++|++++
T Consensus 325 -----------~~~lvi~G~g~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~~~~~~~~~aDv~l~p---S~~E~~gl~~l 388 (476)
T cd03791 325 -----------GGQLVILGSGDPEYEEALRELAARY-PGRVAVLIG-YDEALAHLIYAGADFFLMP---SRFEPCGLTQM 388 (476)
T ss_pred -----------CcEEEEEecCCHHHHHHHHHHHHhC-CCcEEEEEe-CCHHHHHHHHHhCCEEECC---CCCCCCcHHHH
Confidence 399999999853 34566666654 467887766 5677788999999999998 66789999999
Q ss_pred HHHhCCCcEEEecCccchhccccCc------cEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHH
Q 011690 389 DMFGCGLPVCAVSYSCIEELVKVDK------NGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT 460 (479)
Q Consensus 389 Eama~G~PVIas~~~~~~e~i~~~~------~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 460 (479)
|||+||+|||+++.||..|++.++. +|+++ .++++++++|.++++.+. +++.+.++++++.+ ..++|+.
T Consensus 389 EAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~~~~~~~~--~~fsw~~ 465 (476)
T cd03791 389 YAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYR-DPEAWRKLQRNAMA--QDFSWDR 465 (476)
T ss_pred HHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHc-CHHHHHHHHHHHhc--cCCChHH
Confidence 9999999999999999999999988 99999 469999999999987432 57888888888766 2566665
Q ss_pred HHHH
Q 011690 461 EWEE 464 (479)
Q Consensus 461 ~~~~ 464 (479)
..++
T Consensus 466 ~a~~ 469 (476)
T cd03791 466 SAKE 469 (476)
T ss_pred HHHH
Confidence 5544
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-30 Score=259.08 Aligned_cols=241 Identities=13% Similarity=0.121 Sum_probs=185.0
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+|++... .. +++..++|+|.+.|+..... ..... ......+.++++|
T Consensus 86 ~~~Divh~~~~~~~---~~---~~~~~~~~~v~~~h~~~~~~----------~~~~~----------~~~~~~~~~~~~s 139 (335)
T cd03802 86 GDFDIVHNHSLHLP---LP---FARPLPVPVVTTLHGPPDPE----------LLKLY----------YAARPDVPFVSIS 139 (335)
T ss_pred CCCCEEEecCcccc---hh---hhcccCCCEEEEecCCCCcc----------cchHH----------HhhCcCCeEEEec
Confidence 78999999994322 21 45567899999999876211 11111 1224578899999
Q ss_pred HHHHHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccc
Q 011690 180 QAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVF 258 (479)
Q Consensus 180 ~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (479)
+..++.+... .++.+|||| +.+.|.+.+
T Consensus 140 ~~~~~~~~~~--~~~~vi~ngvd~~~~~~~~------------------------------------------------- 168 (335)
T cd03802 140 DAQRRPWPPL--PWVATVHNGIDLDDYPFRG------------------------------------------------- 168 (335)
T ss_pred HHHHhhcccc--cccEEecCCcChhhCCCCC-------------------------------------------------
Confidence 9988766443 458999999 666665421
Q ss_pred cCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHH
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 338 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~ 338 (479)
.++ ..++++|++.+.||++.+++|++. ++++|+|+|.|+..+.+.
T Consensus 169 --~~~-~~i~~~Gr~~~~Kg~~~li~~~~~--------------------------------~~~~l~i~G~~~~~~~~~ 213 (335)
T cd03802 169 --PKG-DYLLFLGRISPEKGPHLAIRAARR--------------------------------AGIPLKLAGPVSDPDYFY 213 (335)
T ss_pred --CCC-CEEEEEEeeccccCHHHHHHHHHh--------------------------------cCCeEEEEeCCCCHHHHH
Confidence 112 378999999999999999998653 368999999998888777
Q ss_pred HHHHHcC-C-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEE
Q 011690 339 EKIRRLR-L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL 416 (479)
Q Consensus 339 ~~~~~~~-l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~ 416 (479)
..+++.. + ++|.|.|. ++.+++..+++++|++++|+ ...|++|++++||||||+|||+++.++.+|++.++.+|+
T Consensus 214 ~~~~~~~~~~~~v~~~G~-~~~~~~~~~~~~~d~~v~ps--~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~ 290 (335)
T cd03802 214 REIAPELLDGPDIEYLGE-VGGAEKAELLGNARALLFPI--LWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGF 290 (335)
T ss_pred HHHHHhcccCCcEEEeCC-CCHHHHHHHHHhCcEEEeCC--cccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEE
Confidence 7777664 3 78999997 99999999999999999982 246889999999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHH
Q 011690 417 LFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEE 464 (479)
Q Consensus 417 l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 464 (479)
+++++++++++|.++.+. + .+..++.+.+ .++|+..-++
T Consensus 291 l~~~~~~l~~~l~~l~~~----~--~~~~~~~~~~---~~s~~~~~~~ 329 (335)
T cd03802 291 LVDSVEELAAAVARADRL----D--RAACRRRAER---RFSAARMVDD 329 (335)
T ss_pred EeCCHHHHHHHHHHHhcc----H--HHHHHHHHHH---hCCHHHHHHH
Confidence 998899999999998763 2 2334444444 5666654443
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-30 Score=273.24 Aligned_cols=281 Identities=13% Similarity=0.127 Sum_probs=206.5
Q ss_pred cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEE-ecCchhhhhhhhcCCCchhHHHHHHHhHHHHH-HHHhhcCCEEE
Q 011690 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD-WHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIE-KYYGKMANGCL 176 (479)
Q Consensus 99 ~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~-~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~~~ad~vi 176 (479)
..+||+||+|+ ..+...+.++++..|+|++++ .|.+. +... ......-+... .+ ..+...+| ++
T Consensus 278 ~~rpDIVHt~~---~~a~l~g~laA~lagvpviv~~~h~~~-~~~~-----~r~~~~e~~~~----~~a~~i~~~sd-~v 343 (578)
T PRK15490 278 ERKLDYLSVWQ---DGACLMIALAALIAGVPRIQLGLRGLP-PVVR-----KRLFKPEYEPL----YQALAVVPGVD-FM 343 (578)
T ss_pred HcCCCEEEEcC---cccHHHHHHHHHhcCCCEEEEeecccC-Ccch-----hhHHHHHHHHh----hhhceeEecch-hh
Confidence 38999999999 555566778888899999875 55532 1100 11110101111 01 12234455 77
Q ss_pred EeCHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccc
Q 011690 177 CVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSL 252 (479)
Q Consensus 177 ~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (479)
++|..+++.+.+.++.+ +.+|||| +++.|.+..... .....++.
T Consensus 344 ~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~-~~~r~~~~------------------------------- 391 (578)
T PRK15490 344 SNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVP-HKIWQQFT------------------------------- 391 (578)
T ss_pred hccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhh-HHHHHHhh-------------------------------
Confidence 89998888888877765 8999999 777777754211 11111111
Q ss_pred cccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC
Q 011690 253 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 332 (479)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~ 332 (479)
.+++++. .+++++||+.+.||+..+++|+..+.++ .|+++|+|+|+|+
T Consensus 392 ----~~l~~~~-~vIg~VgRl~~~Kg~~~LI~A~a~llk~---------------------------~pdirLvIVGdG~ 439 (578)
T PRK15490 392 ----QKTQDAD-TTIGGVFRFVGDKNPFAWIDFAARYLQH---------------------------HPATRFVLVGDGD 439 (578)
T ss_pred ----hccCCCC-cEEEEEEEEehhcCHHHHHHHHHHHHhH---------------------------CCCeEEEEEeCch
Confidence 0122333 3789999999999999999999988765 7899999999999
Q ss_pred ChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhcccc
Q 011690 333 DKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV 411 (479)
Q Consensus 333 ~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~ 411 (479)
..+.+++.++++++ ++|.|+|. .+|++.+|+++|++|+| |..|+||++++|||+||+|||+|+.|+.+|++.+
T Consensus 440 ~~eeLk~la~elgL~d~V~FlG~---~~Dv~~~LaaADVfVlP---S~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~d 513 (578)
T PRK15490 440 LRAEAQKRAEQLGILERILFVGA---SRDVGYWLQKMNVFILF---SRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIE 513 (578)
T ss_pred hHHHHHHHHHHcCCCCcEEECCC---hhhHHHHHHhCCEEEEc---ccccCccHHHHHHHHhCCCEEEeCCCCcHHHccc
Confidence 99999999999999 79999997 78999999999999998 6779999999999999999999999999999999
Q ss_pred CccEEEe--CCHHHHHHHHH---HHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHHHHH
Q 011690 412 DKNGLLF--SSSSELADQLL---MLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAK 467 (479)
Q Consensus 412 ~~~G~l~--~~~~~la~~l~---~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~ 467 (479)
+.+|+++ .|++++++.+. .+.+ ..+.+..+++++++.. ..++|+...+++.+
T Consensus 514 G~nG~LVp~~D~~aLa~ai~lA~aL~~----ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~k 571 (578)
T PRK15490 514 GVSGFILDDAQTVNLDQACRYAEKLVN----LWRSRTGICQQTQSFLQERFTVEHMVGTFVK 571 (578)
T ss_pred CCcEEEECCCChhhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 9999999 45677777663 3344 2344556777777643 46778777665443
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-30 Score=252.44 Aligned_cols=324 Identities=23% Similarity=0.284 Sum_probs=226.1
Q ss_pred CCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCe---EEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 011690 15 LGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSI---HIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFM 90 (479)
Q Consensus 15 ~g~~~r-~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi---~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 90 (479)
.|+..+ +...+..|.++ ||+|+|++........... .... ...... ............+.+.+.+
T Consensus 11 ~gG~~~~~~~l~~~l~~~-g~~v~v~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--- 79 (353)
T cd03811 11 GGGAERVLLNLANGLDKR-GYDVTLVVLRDEGDYLELL-PSNVKLIPVRVLK------LKSLRDLLAILRLRRLLRK--- 79 (353)
T ss_pred CCCcchhHHHHHHHHHhc-CceEEEEEcCCCCcccccc-ccchhhhceeeee------cccccchhHHHHHHHHHHh---
Confidence 444444 45556777675 9999999977653321111 1111 111111 0011112222333333333
Q ss_pred HHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhh
Q 011690 91 LLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGK 170 (479)
Q Consensus 91 ~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 170 (479)
.+||+|++++. ....++..+..+. ++|++++.|+....... .... . ... ++...+
T Consensus 80 ---------~~~dii~~~~~--~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~----~~~~---~-~~~-----~~~~~~ 134 (353)
T cd03811 80 ---------EKPDVVISHLT--TTPNVLALLAARL-GTKLIVWEHNSLSLELK----RKLR---L-LLL-----IRKLYR 134 (353)
T ss_pred ---------cCCCEEEEcCc--cchhHHHHHHhhc-CCceEEEEcCcchhhhc----cchh---H-HHH-----HHhhcc
Confidence 79999999995 2334444444444 78999999987632111 0000 0 022 667778
Q ss_pred cCCEEEEeCHHHHHHHHHhhCC---eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCccccc
Q 011690 171 MANGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADE 246 (479)
Q Consensus 171 ~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
.+|.++++|+.+++.+.+.++. ++.++||+ +.+.+.+...... .
T Consensus 135 ~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~-----~--------------------------- 182 (353)
T cd03811 135 RADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL-----E--------------------------- 182 (353)
T ss_pred ccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh-----h---------------------------
Confidence 9999999999999999988773 38999999 5555544331110 0
Q ss_pred chhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEE
Q 011690 247 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 326 (479)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~ 326 (479)
... .+++..++++|++.+.||++.+++|++.+.++ .++++|+
T Consensus 183 ----------~~~-~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~---------------------------~~~~~l~ 224 (353)
T cd03811 183 ----------LGI-PPDGPVILAVGRLSPQKGFDTLIRAFALLRKE---------------------------GPDARLV 224 (353)
T ss_pred ----------cCC-CCCceEEEEEecchhhcChHHHHHHHHHhhhc---------------------------CCCceEE
Confidence 011 23346899999999999999999999999864 7889999
Q ss_pred EEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccc
Q 011690 327 ITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 405 (479)
Q Consensus 327 IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~ 405 (479)
|+|.|+..+.+++.++++++ ++|.|.|. .+++.++++.||++++| +..+++|++++|||++|+|||+++.++.
T Consensus 225 i~G~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~~d~~i~p---s~~e~~~~~~~Ea~~~G~PvI~~~~~~~ 298 (353)
T cd03811 225 ILGDGPLREELEALAKELGLADRVHFLGF---QSNPYPYLKAADLFVLS---SRYEGFPNVLLEAMALGTPVVATDCPGP 298 (353)
T ss_pred EEcCCccHHHHHHHHHhcCCCccEEEecc---cCCHHHHHHhCCEEEeC---cccCCCCcHHHHHHHhCCCEEEcCCCCh
Confidence 99999999999999999988 68999997 67899999999999998 5568899999999999999999999999
Q ss_pred hhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 011690 406 EELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 451 (479)
Q Consensus 406 ~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~ 451 (479)
.|++.++.+|+++ ++++++++.+..+... .++++.++++++++.+
T Consensus 299 ~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~ 345 (353)
T cd03811 299 REILEDGENGLLVPVGDEAALAAAALALLDL-LLDPELRERLAAAARE 345 (353)
T ss_pred HHHhcCCCceEEECCCCHHHHHHHHHHHHhc-cCChHHHHHHHHHHHH
Confidence 9999999999999 4577885444443332 2267888888886655
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-29 Score=271.90 Aligned_cols=311 Identities=14% Similarity=0.144 Sum_probs=215.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHh-------cCCcEEEEecCchhhh------hhhhcCCCchhHHHHHHHhHHHHHH
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSL-------RRSAFIVDWHNFGYTL------LSLSLGRRSHFVSIYRCFSVLRIEK 166 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~-------~~~~~ii~~h~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~e~ 166 (479)
.+|||||+|+ +.+.++..+++.. .++|+|+|+|+..+.- ...... .................+
T Consensus 140 ~~pDiiH~hd---w~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~-~~~~~~~~~~~~~~n~lk 215 (489)
T PRK14098 140 WKPDIIHCHD---WYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLP-EEVCSGLHREGDEVNMLY 215 (489)
T ss_pred CCCCEEEecC---cHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCC-HHhhhhhhhcCCcccHHH
Confidence 4899999998 6666666666543 3799999999975310 000000 000000000000012245
Q ss_pred HHhhcCCEEEEeCHHHHHHHHHh----hC---------CeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccc
Q 011690 167 YYGKMANGCLCVTQAMQHELAQN----WG---------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQD 232 (479)
Q Consensus 167 ~~~~~ad~vi~vS~~~~~~l~~~----~~---------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (479)
...+.||.|+++|+..++++... +| .++.+|+|| |.+.|.|..... +..+++.. +
T Consensus 216 ~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~---~~~~~~~~--------~ 284 (489)
T PRK14098 216 TGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKL---IKKRYSIE--------R 284 (489)
T ss_pred HHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCccccc---ccccCCcc--------h
Confidence 55678999999999999988752 23 248999999 888888753210 10010000 0
Q ss_pred cccccccCCcccccchhccccccccccC--CCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHh
Q 011690 233 CVSNAGMEGQKADETIFTSLAGIDVFLK--PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK 310 (479)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~ 310 (479)
..+ +.... ...+..++++ ++.| +++++||+.++||++.+++|+..+.+
T Consensus 285 ------~~~-k~~~k---~~l~~~lgl~~~~~~~-~i~~vgRl~~~KG~d~li~a~~~l~~------------------- 334 (489)
T PRK14098 285 ------LDG-KLENK---KALLEEVGLPFDEETP-LVGVIINFDDFQGAELLAESLEKLVE------------------- 334 (489)
T ss_pred ------hhh-HHHHH---HHHHHHhCCCCccCCC-EEEEeccccccCcHHHHHHHHHHHHh-------------------
Confidence 000 00000 0011223443 3444 89999999999999999999998863
Q ss_pred hhccCcccCCCCEEEEEEecCCC--hHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHH
Q 011690 311 EISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV 388 (479)
Q Consensus 311 ~~~~~~~~~~p~~~l~IvG~G~~--~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~ll 388 (479)
++++|+|+|+|+. .+.+++.+++++ ++|.|.|. ++.+++..+|++||++++| |..|++|++.+
T Consensus 335 ----------~~~~lvivG~G~~~~~~~l~~l~~~~~-~~V~~~g~-~~~~~~~~~~a~aDi~l~P---S~~E~~Gl~~l 399 (489)
T PRK14098 335 ----------LDIQLVICGSGDKEYEKRFQDFAEEHP-EQVSVQTE-FTDAFFHLAIAGLDMLLMP---GKIESCGMLQM 399 (489)
T ss_pred ----------cCcEEEEEeCCCHHHHHHHHHHHHHCC-CCEEEEEe-cCHHHHHHHHHhCCEEEeC---CCCCCchHHHH
Confidence 3699999999974 477888888764 68999997 8999999999999999999 67899999999
Q ss_pred HHHhCCCcEEEecCccchhcccc----CccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHH
Q 011690 389 DMFGCGLPVCAVSYSCIEELVKV----DKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 462 (479)
Q Consensus 389 Eama~G~PVIas~~~~~~e~i~~----~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 462 (479)
|||+||+|+|+++.||..|.+.+ +.+|+++ .|+++|+++|.++++.+. +++.++++++++.+ ..++|+...
T Consensus 400 EAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~-~~~~~~~~~~~~~~--~~fsw~~~a 476 (489)
T PRK14098 400 FAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYH-DEERWEELVLEAME--RDFSWKNSA 476 (489)
T ss_pred HHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHc-CHHHHHHHHHHHhc--CCCChHHHH
Confidence 99999999999999999988864 6799999 579999999998765322 57788888776644 478888887
Q ss_pred HHHHHHHHHHHH
Q 011690 463 EEHAKPLITEVI 474 (479)
Q Consensus 463 ~~~~~~~~~~~~ 474 (479)
++. ..++++++
T Consensus 477 ~~y-~~lY~~~~ 487 (489)
T PRK14098 477 EEY-AQLYRELL 487 (489)
T ss_pred HHH-HHHHHHHh
Confidence 654 56666654
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-29 Score=251.90 Aligned_cols=242 Identities=22% Similarity=0.266 Sum_probs=188.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||++++..+ ........+..++|+|+++|++.+. .... .......|.++++|
T Consensus 95 ~~~dii~~~~~~~~--~~~~~~~~~~~~~~~i~~~hd~~~~---------~~~~------------~~~~~~~d~ii~~s 151 (359)
T cd03823 95 FRPDVVHFHHLQGL--GVSILRAARDRGIPIVLTLHDYWLI---------CPRQ------------GLFKKGGDAVIAPS 151 (359)
T ss_pred cCCCEEEECCccch--HHHHHHHHHhcCCCEEEEEeeeeee---------cchh------------hhhccCCCEEEEeC
Confidence 78999999985322 2222233445679999999986411 0100 11112349999999
Q ss_pred HHHHHHHHHhhC--CeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccc
Q 011690 180 QAMQHELAQNWG--IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 256 (479)
Q Consensus 180 ~~~~~~l~~~~~--~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
+.+++.+.+... .++.+++|+ +...+.+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~---------------------------------------------- 185 (359)
T cd03823 152 RFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRR---------------------------------------------- 185 (359)
T ss_pred HHHHHHHHHcCCCccceEEecCCcChhhcccccc----------------------------------------------
Confidence 999998887643 258999999 5544433220
Q ss_pred cccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHH
Q 011690 257 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 336 (479)
Q Consensus 257 ~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~ 336 (479)
..++.+..++++|++.+.||++.+++|++.+.+ ++++|+++|.|+....
T Consensus 186 --~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~-----------------------------~~~~l~i~G~~~~~~~ 234 (359)
T cd03823 186 --APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR-----------------------------GDIELVIVGNGLELEE 234 (359)
T ss_pred --CCCCCceEEEEEecCccccCHHHHHHHHHHHHh-----------------------------cCcEEEEEcCchhhhH
Confidence 012334589999999999999999999998752 5799999999987665
Q ss_pred HHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCC-CCCCCcHHHHHHHhCCCcEEEecCccchhccccCcc
Q 011690 337 YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 414 (479)
Q Consensus 337 l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~ 414 (479)
.+... +. ++|.|.|. ++.+++..+|++||++++| + ..|++|++++|||+||+|||+|+.++..|++.++.+
T Consensus 235 ~~~~~---~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~p---s~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~ 307 (359)
T cd03823 235 ESYEL---EGDPRVEFLGA-YPQEEIDDFYAEIDVLVVP---SIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVN 307 (359)
T ss_pred HHHhh---cCCCeEEEeCC-CCHHHHHHHHHhCCEEEEc---CcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCc
Confidence 54433 34 78999997 9999999999999999998 4 378899999999999999999999999999999999
Q ss_pred EEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 415 GLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 415 G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
|+++ .|++++++++.++++ +++.++.+++++++.
T Consensus 308 g~~~~~~d~~~l~~~i~~l~~----~~~~~~~~~~~~~~~ 343 (359)
T cd03823 308 GLLFPPGDAEDLAAALERLID----DPDLLERLRAGIEPP 343 (359)
T ss_pred EEEECCCCHHHHHHHHHHHHh----ChHHHHHHHHhHHHh
Confidence 9999 458999999999999 589999999999883
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=262.05 Aligned_cols=347 Identities=16% Similarity=0.165 Sum_probs=222.6
Q ss_pred CCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccc---c-C-CCCeEEEEeecCCCCCCCCCchhHHHHHH-------
Q 011690 14 DLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAI---L-E-HPSIHIHTMTQWPTIPRGLPKVLKPVLLL------- 81 (479)
Q Consensus 14 ~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~---~-~-~~gi~i~~~~~~~~~~~~~~~~~~~~~~l------- 81 (479)
+-|+.-|+.+.+..|++. |+|+++|..+....... . . -+.+.+...+ .. ....+.+..+
T Consensus 13 ~~G~~~r~~~~~~~L~~~--~~v~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~-----~~~~~~~~~l~~~~p~~ 83 (397)
T TIGR03087 13 NKGDKIRSFHLLRHLAAR--HRVHLGTFVDDPEDWQYAAALRPLCEEVCVVPLD--PR-----VARLRSLLGLLTGEPLS 83 (397)
T ss_pred CCCCcEeHHHHHHHHHhc--CcEEEEEeCCCcccHHHHHHHHHHhheeEEeecC--cH-----HHHHHHHhhhcCCCCCc
Confidence 345667888889999774 99999998754321110 0 0 1122222221 00 0000000000
Q ss_pred HHH--HHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHH-HhcCCcEEEEecCchhhhhh-hhcCCCchhHHHHH
Q 011690 82 LKP--LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLS-LSLGRRSHFVSIYR 157 (479)
Q Consensus 82 ~~~--l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~-~~~~~~~ii~~h~~~~~~~~-~~~~~~~~~~~~~~ 157 (479)
... -.++...++.++. ..++|+||++++... .++. ...++|+|++.|+.....+. ...........+++
T Consensus 84 ~~~~~~~~~~~~l~~~~~-~~~~D~v~~~~~~~~------~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~ 156 (397)
T TIGR03087 84 LPYYRSRRLARWVNALLA-AEPVDAIVVFSSAMA------QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYR 156 (397)
T ss_pred chhhCCHHHHHHHHHHHh-hCCCCEEEEeccccc------eeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHH
Confidence 000 0111222233332 278999999984321 2222 34678999999986422211 11000111111111
Q ss_pred H--HhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCC---eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCcc
Q 011690 158 C--FSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQ 231 (479)
Q Consensus 158 ~--~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (479)
. ......|+.+++.+|.++++|+.+++.+.+..+. ++.+|||| |.+.|.+.... ..
T Consensus 157 ~~~~~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~--~~---------------- 218 (397)
T TIGR03087 157 REGRLLLAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDY--PN---------------- 218 (397)
T ss_pred HHHHHHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccc--cC----------------
Confidence 0 1123458989999999999999999998776432 48899999 77777654311 00
Q ss_pred ccccccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHH----HHHhHHHHhhhhccCCCchhhh
Q 011690 232 DCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEA----ALMYDRRVAAILNEDDSTNEEV 307 (479)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA----~~~l~~~~~~~~~~~~~~~~~~ 307 (479)
...++++ +++++|++.+.||++.++.+ +..+.++
T Consensus 219 --------------------------~~~~~~~-~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~--------------- 256 (397)
T TIGR03087 219 --------------------------PYPPGKR-VLVFTGAMDYWPNIDAVVWFAERVFPAVRAR--------------- 256 (397)
T ss_pred --------------------------CCCCCCc-EEEEEEecCCccCHHHHHHHHHHHHHHHHHH---------------
Confidence 0112333 79999999999999998854 4444443
Q ss_pred hHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHH
Q 011690 308 FLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMK 386 (479)
Q Consensus 308 ~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~ 386 (479)
.|+++|+|+|+|+.. . +++++. ++|.|+|. ++ ++..+|++||++|+|+. .++|+|++
T Consensus 257 ------------~p~~~l~ivG~g~~~-~----~~~l~~~~~V~~~G~-v~--~~~~~~~~adv~v~Ps~--~~eG~~~~ 314 (397)
T TIGR03087 257 ------------RPAAEFYIVGAKPSP-A----VRALAALPGVTVTGS-VA--DVRPYLAHAAVAVAPLR--IARGIQNK 314 (397)
T ss_pred ------------CCCcEEEEECCCChH-H----HHHhccCCCeEEeee-cC--CHHHHHHhCCEEEeccc--ccCCcccH
Confidence 789999999999853 2 334444 68999997 54 89999999999999932 46889999
Q ss_pred HHHHHhCCCcEEEecCccchhccccCccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHH
Q 011690 387 VVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWE 463 (479)
Q Consensus 387 llEama~G~PVIas~~~~~~e~i~~~~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~ 463 (479)
++||||||+|||+|+.++. .+...+++|+++ +|+++++++|.++++ |++.++.|++++++.. ..++|+..-+
T Consensus 315 ~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~~~~~~la~ai~~ll~----~~~~~~~~~~~ar~~v~~~fsw~~~~~ 388 (397)
T TIGR03087 315 VLEAMAMAKPVVASPEAAE-GIDALPGAELLVAADPADFAAAILALLA----NPAEREELGQAARRRVLQHYHWPRNLA 388 (397)
T ss_pred HHHHHHcCCCEEecCcccc-cccccCCcceEeCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999997543 333445678887 789999999999998 5889999999998853 4677765544
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=269.15 Aligned_cols=269 Identities=14% Similarity=0.204 Sum_probs=205.2
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHH--HhhcCCEEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKY--YGKMANGCLC 177 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~--~~~~ad~vi~ 177 (479)
.++|++|++.|+.... .+......+|.++.+|+.-+.... ....... +...+ +.. ..+.+|.+|+
T Consensus 210 ~~~di~i~dr~~~~~~----~~~~~~~~~~~v~~lH~~h~~~~~--~~~~~~~--~~~~y-----~~~~~~~~~~D~iI~ 276 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQ----AVLENKGPAKLGVVVHAEHFSESA--TNETYIL--WNNYY-----EYQFSNADYIDFFIT 276 (500)
T ss_pred CCCCEEEEcCCcccch----HHHhcCCCceEEEEEChhhhcCcc--CcchhHH--HHHHH-----HHHHhchhhCCEEEE
Confidence 6899999998653221 133445578999999975421110 0001111 11112 211 2356899999
Q ss_pred eCHHHHHHHHHhhC------CeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhc
Q 011690 178 VTQAMQHELAQNWG------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 250 (479)
Q Consensus 178 vS~~~~~~l~~~~~------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (479)
+|+..++.+.+.++ .++.+|||| +...+.+..
T Consensus 277 ~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~~----------------------------------------- 315 (500)
T TIGR02918 277 ATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPEQ----------------------------------------- 315 (500)
T ss_pred CCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCccc-----------------------------------------
Confidence 99999988876543 237899998 333222210
Q ss_pred cccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEec
Q 011690 251 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 330 (479)
Q Consensus 251 ~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~ 330 (479)
..++..|+++||+.+.||++.||+|+..+.++ .|+++|.|+|+
T Consensus 316 ----------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~---------------------------~p~~~l~i~G~ 358 (500)
T TIGR02918 316 ----------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKS---------------------------VPELTFDIYGE 358 (500)
T ss_pred ----------ccCCeEEEEEeccccccCHHHHHHHHHHHHhh---------------------------CCCeEEEEEEC
Confidence 11234799999999999999999999999875 89999999999
Q ss_pred CCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc-cchhc
Q 011690 331 GPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEEL 408 (479)
Q Consensus 331 G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~-~~~e~ 408 (479)
|+..+.+++.++++++ ++|.|.|. . ++.++|+.||++|+| |..||||++++||||||+|||+++.+ |.+|+
T Consensus 359 G~~~~~l~~~i~~~~l~~~V~f~G~-~---~~~~~~~~adv~v~p---S~~Egfgl~~lEAma~G~PVI~~dv~~G~~ei 431 (500)
T TIGR02918 359 GGEKQKLQKIINENQAQDYIHLKGH-R---NLSEVYKDYELYLSA---STSEGFGLTLMEAVGSGLGMIGFDVNYGNPTF 431 (500)
T ss_pred chhHHHHHHHHHHcCCCCeEEEcCC-C---CHHHHHHhCCEEEEc---CccccccHHHHHHHHhCCCEEEecCCCCCHHH
Confidence 9999999999999998 78999996 3 688999999999999 67899999999999999999999986 89999
Q ss_pred cccCccEEEeC-C---------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHH
Q 011690 409 VKVDKNGLLFS-S---------SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE 472 (479)
Q Consensus 409 i~~~~~G~l~~-~---------~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 472 (479)
|+++.+|++++ + +++||++|.++++ ++.+++|++++++....++|+..|++ ...++++
T Consensus 432 I~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-----~~~~~~~~~~a~~~a~~fs~~~v~~~-w~~ll~~ 499 (500)
T TIGR02918 432 IEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-----SNDIDAFHEYSYQIAEGFLTANIIEK-WKKLVRE 499 (500)
T ss_pred ccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-----hHHHHHHHHHHHHHHHhcCHHHHHHH-HHHHHhh
Confidence 99999999995 1 7889999999985 34689999999988888889888765 3355554
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=256.05 Aligned_cols=327 Identities=16% Similarity=0.148 Sum_probs=215.1
Q ss_pred EEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCccc-ccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHH
Q 011690 7 ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (479)
Q Consensus 7 ~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~-~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l 85 (479)
++++... +...+|.++.+..|++. ..+++|+|......... ......+....+. . .+...+....+.
T Consensus 2 i~~~~~~-~~~~GG~E~~~~~l~~~-l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~--- 69 (351)
T cd03804 2 VAIVHDW-LVNIGGGEKVVEALARL-FPDADIFTLVDDPDKLPRLLRLKKIRTSFIQ--K-----LPFARRRYRKYL--- 69 (351)
T ss_pred EEEEEec-cccCCCHHHHHHHHHHh-CCCCCEEEEeecCCccchhhcCCceeechhh--h-----chhhHhhHhhhC---
Confidence 4445433 34457778889999997 66677777543221111 1111122222222 0 111111111111
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCch---hhhhh---hhcCCCc-hhHHHHHH
Q 011690 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG---YTLLS---LSLGRRS-HFVSIYRC 158 (479)
Q Consensus 86 ~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~---~~~~~---~~~~~~~-~~~~~~~~ 158 (479)
.++..++..+ +..++|+|++++++.. ..+....++|.+..+|... ++... ...+... ........
T Consensus 70 -~~~~~~~~~~-~~~~~D~v~~~~~~~~------~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (351)
T cd03804 70 -PLMPLAIEQF-DLSGYDLVISSSHAVA------KGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLH 141 (351)
T ss_pred -chhhHHHHhc-cccCCCEEEEcCcHHh------ccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHH
Confidence 1111112211 2368999998873211 1111345778888888632 11110 0000000 00011111
Q ss_pred HhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCcccccccc
Q 011690 159 FSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA 237 (479)
Q Consensus 159 ~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (479)
+ ....++...+.+|.++++|+.+++.+.+.++.+..+++|+ +.+.|.+..
T Consensus 142 ~-~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~vi~~~~d~~~~~~~~---------------------------- 192 (351)
T cd03804 142 Y-LRIWDRRSAARVDYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAE---------------------------- 192 (351)
T ss_pred H-HHHHHHHHhcCCCEEEECCHHHHHHHHHHhCCCcEEECCCCCHhhcCcCC----------------------------
Confidence 1 2334777788999999999999999988888888899998 544443321
Q ss_pred ccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcc
Q 011690 238 GMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 317 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (479)
... ..++++|++.+.||++.+++|++.+
T Consensus 193 -----------------------~~~-~~il~~G~~~~~K~~~~li~a~~~~---------------------------- 220 (351)
T cd03804 193 -----------------------EKE-DYYLSVGRLVPYKRIDLAIEAFNKL---------------------------- 220 (351)
T ss_pred -----------------------CCC-CEEEEEEcCccccChHHHHHHHHHC----------------------------
Confidence 012 2688999999999999999999753
Q ss_pred cCCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcE
Q 011690 318 YLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 397 (479)
Q Consensus 318 ~~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PV 397 (479)
| ++|+|+|+|+..+.+++ ...++|.|.|. ++.+++..+|++||++++| +. |++|++++|||+||+||
T Consensus 221 ---~-~~l~ivG~g~~~~~l~~----~~~~~V~~~g~-~~~~~~~~~~~~ad~~v~p---s~-e~~g~~~~Eama~G~Pv 287 (351)
T cd03804 221 ---G-KRLVVIGDGPELDRLRA----KAGPNVTFLGR-VSDEELRDLYARARAFLFP---AE-EDFGIVPVEAMASGTPV 287 (351)
T ss_pred ---C-CcEEEEECChhHHHHHh----hcCCCEEEecC-CCHHHHHHHHHhCCEEEEC---Cc-CCCCchHHHHHHcCCCE
Confidence 4 78999999997776665 22378999997 9999999999999999998 55 88999999999999999
Q ss_pred EEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHH
Q 011690 398 CAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDS-DVLKKLRNGTLE 451 (479)
Q Consensus 398 Ias~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~-~~~~~~~~~~~~ 451 (479)
|+++.++..|++.++.+|+++ +|+++++++|.+++++ + ...+.+++++.+
T Consensus 288 i~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~----~~~~~~~~~~~~~~ 340 (351)
T cd03804 288 IAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKN----EDFDPQAIRAHAER 340 (351)
T ss_pred EEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhC----cccCHHHHHHHHHh
Confidence 999999999999999999999 5699999999999995 4 455666666654
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-28 Score=257.28 Aligned_cols=264 Identities=19% Similarity=0.219 Sum_probs=200.5
Q ss_pred CCcEEEEeCCCCcchHHHHHHHHHhcCC-cEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 101 SPDVFLVQNPPSVPTLVAVKWASSLRRS-AFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 101 ~~DvI~~~~p~~~~~~~~~~~~~~~~~~-~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
++|++|.+- ......++.+++...+. ++|.+.|++. +.... ... ....+ .+.+.+.+|.++++|
T Consensus 127 ~~~v~~sy~--~~~~~~~~~~l~~~~~~~~~i~~~Hg~d--~~~~~---~~~---~~~~~-----~~~~~~~~d~ii~~S 191 (407)
T cd04946 127 QGTVFYSYW--LHETAYALALLKKEYLRKRVISRAHGYD--LYEDR---YPS---GYIPL-----RRYLLSSLDAVFPCS 191 (407)
T ss_pred CceEEEEec--CchHHHHHHHHHHhcCCceEEEEeccch--hhhhh---ccc---cchHH-----HHHHHhcCCEEEECC
Confidence 445555543 23333333344444444 4888999864 11100 000 11112 444567899999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 255 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (479)
+.+++.+.+.++.. +.++||| +...+.+..
T Consensus 192 ~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~~---------------------------------------------- 225 (407)
T cd04946 192 EQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISKP---------------------------------------------- 225 (407)
T ss_pred HHHHHHHHHHCCCccccEEEEECCcccccccCCC----------------------------------------------
Confidence 99999999887653 7899999 433332211
Q ss_pred ccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCC--CEEEEEEecCCC
Q 011690 256 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP--RLLFIITGKGPD 333 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~l~IvG~G~~ 333 (479)
..+++..++++|++.+.||++.+++|+..+.++ .| +++++++|+|+.
T Consensus 226 ----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~~~iiG~g~~ 274 (407)
T cd04946 226 ----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKA---------------------------RPSIKIKWTHIGGGPL 274 (407)
T ss_pred ----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHh---------------------------CCCceEEEEEEeCchH
Confidence 012345899999999999999999999999875 55 577899999999
Q ss_pred hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHc--CCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccc
Q 011690 334 KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK 410 (479)
Q Consensus 334 ~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~ 410 (479)
.+.+++.+++++. ++|.|+|. ++.+++..+|+. +|+++.| |..||+|++++||||||+|||+|+.||.+|++.
T Consensus 275 ~~~l~~~~~~~~~~~~V~f~G~-v~~~e~~~~~~~~~~~v~v~~---S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~ 350 (407)
T cd04946 275 EDTLKELAESKPENISVNFTGE-LSNSEVYKLYKENPVDVFVNL---SESEGLPVSIMEAMSFGIPVIATNVGGTPEIVD 350 (407)
T ss_pred HHHHHHHHHhcCCCceEEEecC-CChHHHHHHHhhcCCCEEEeC---CccccccHHHHHHHHcCCCEEeCCCCCcHHHhc
Confidence 9999999988777 68999996 999999999976 6788887 678999999999999999999999999999999
Q ss_pred cCccEEEeC---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHH
Q 011690 411 VDKNGLLFS---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEE 464 (479)
Q Consensus 411 ~~~~G~l~~---~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~ 464 (479)
++.+|+++. |+++++++|.++++ +++.++.|++++++.. ..++|+...++
T Consensus 351 ~~~~G~l~~~~~~~~~la~~I~~ll~----~~~~~~~m~~~ar~~~~~~f~~~~~~~~ 404 (407)
T cd04946 351 NGGNGLLLSKDPTPNELVSSLSKFID----NEEEYQTMREKAREKWEENFNASKNYRE 404 (407)
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHcCHHHhHHH
Confidence 999999983 58999999999998 6899999999999854 46666665544
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-28 Score=248.51 Aligned_cols=279 Identities=17% Similarity=0.172 Sum_probs=193.8
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHh-cCCcEEEEecCchhhhhhhhc----------------CCCchhHHHHHHHhHH
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSL----------------GRRSHFVSIYRCFSVL 162 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~-~~~~~ii~~h~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~ 162 (479)
.+||+||+|.+.... +....+.+. .++|+|++.|++......... ...........+. ..
T Consensus 50 ~~~diih~~~~~~~~--~~~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 126 (365)
T cd03825 50 INADIVHLHWIHGGF--LSIEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWI-WR 126 (365)
T ss_pred ccCCEEEEEccccCc--cCHHHHHHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHH-HH
Confidence 799999999843322 112222333 489999999986321110000 0000000011111 11
Q ss_pred HHHHHHhhcCCEEEEeCHHHHHHHHHhhC---CeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccc
Q 011690 163 RIEKYYGKMANGCLCVTQAMQHELAQNWG---IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAG 238 (479)
Q Consensus 163 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~---~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (479)
...+.+...++.++++|+.+++.+.+.+. .++.++||| +.+.|.+..... ....
T Consensus 127 ~~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~---~~~~------------------- 184 (365)
T cd03825 127 RKRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKRE---ARKR------------------- 184 (365)
T ss_pred HHHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcHHH---HHHH-------------------
Confidence 11333335678899999999998877653 349999999 767776654221 1111
Q ss_pred cCCcccccchhccccccccccCCCCCeEEEEEecCCC--CCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCc
Q 011690 239 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 316 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~--~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (479)
.+.+++++ +++++|+... .||++.+++|+..+.++
T Consensus 185 ------------------~~~~~~~~-~i~~~~~~~~~~~K~~~~ll~a~~~l~~~------------------------ 221 (365)
T cd03825 185 ------------------LGLPADKK-IILFGAVGGTDPRKGFDELIEALKRLAER------------------------ 221 (365)
T ss_pred ------------------hCCCCCCe-EEEEEecCCCccccCHHHHHHHHHHhhhc------------------------
Confidence 12334443 5556666544 89999999999988652
Q ss_pred ccCCCCEEEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCC-cchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCC
Q 011690 317 QYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLS-AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG 394 (479)
Q Consensus 317 ~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~-~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G 394 (479)
..++++++++|+|+..... ++ .+|.|+|. ++ .+++..+|+.||++++| |..|++|.+++|||+||
T Consensus 222 --~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~-~~~~~~~~~~~~~ad~~l~p---s~~e~~g~~~~Eam~~g 288 (365)
T cd03825 222 --WKDDIELVVFGASDPEIPP-------DLPFPVHYLGS-LNDDESLALIYSAADVFVVP---SLQENFPNTAIEALACG 288 (365)
T ss_pred --cCCCeEEEEeCCCchhhhc-------cCCCceEecCC-cCCHHHHHHHHHhCCEEEec---cccccccHHHHHHHhcC
Confidence 2578999999998743321 34 67999997 88 78899999999999998 66789999999999999
Q ss_pred CcEEEecCccchhccccCccEEEeC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHH
Q 011690 395 LPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWE 463 (479)
Q Consensus 395 ~PVIas~~~~~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~ 463 (479)
+|||+++.++..|++.++.+|++++ +++++++++.++++ +++.++++++++++.. ..++|+...+
T Consensus 289 ~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~----~~~~~~~~~~~~~~~~~~~~s~~~~~~ 356 (365)
T cd03825 289 TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLA----DPDEREELGEAARELAENEFDSRVQAK 356 (365)
T ss_pred CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 9999999999999999999999984 68999999999998 5888899999888753 3455654443
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-28 Score=253.98 Aligned_cols=323 Identities=11% Similarity=0.039 Sum_probs=197.5
Q ss_pred cceEEEEEecCCCCChhHHHH-HHHHHhhCCCcEEEEecCCCCCcccccCCCCe-EEEEeecCCCCCCCCCchhHHHH--
Q 011690 4 RGRACVVVLGDLGRSPRMQYQ-ALSLARQMSLEVDVVAYGGSKPHAAILEHPSI-HIHTMTQWPTIPRGLPKVLKPVL-- 79 (479)
Q Consensus 4 ~~~~~i~~~~~~g~~~r~~~~-a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi-~i~~~~~~~~~~~~~~~~~~~~~-- 79 (479)
||+++|.+....|+++++... +..+.+ .||+|.|+...+..+.... ...++ .+..+. .. .... ..+.
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~-~G~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~--~~----~~~~-~~~~~~ 71 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQ-QGLASHFVYGYGKGGKESV-SHQNYPQVIKHT--PR----MTAM-ANIALF 71 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHh-cCCeEEEEEecCCCccccc-ccCCcceEEEec--cc----HHHH-HHHHHH
Confidence 488999988888888888665 444555 5999999987665443211 11222 122222 00 0000 0000
Q ss_pred -----HHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHH--HHHH---H-HHhcCCcEEEEecCchhhh-------
Q 011690 80 -----LLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLV--AVKW---A-SSLRRSAFIVDWHNFGYTL------- 141 (479)
Q Consensus 80 -----~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~--~~~~---~-~~~~~~~~ii~~h~~~~~~------- 141 (479)
.....+.. ...++.+..+|||||+|+-......+ +..+ + .+..++|+|.|.|+...-.
T Consensus 72 ~~~~~~~~~~~~~----~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~ 147 (405)
T PRK10125 72 RLFNRDLFGNFNE----LYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTD 147 (405)
T ss_pred HhcchhhcchHHH----HHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCc
Confidence 00011111 11122234799999999833221111 1111 1 1234689999999864111
Q ss_pred ----hhhhc--------CCCchhHHHHHHHhHH--HHHHHHhhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCC-CCCCC
Q 011690 142 ----LSLSL--------GRRSHFVSIYRCFSVL--RIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFF 205 (479)
Q Consensus 142 ----~~~~~--------~~~~~~~~~~~~~~~~--~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f 205 (479)
+.... ..... ....++.+.. ..-+.+.+.++.+|++|+.+++.+.+.++.. +.+|||| |.+.+
T Consensus 148 ~C~~~~~~c~~Cp~l~~~~~~~-~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~~~i~vI~NGid~~~~ 226 (405)
T PRK10125 148 GCEGWKTGCQKCPTLNNYPPVK-VDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATE 226 (405)
T ss_pred ccccccccCCCCCCccCCCCCc-cchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCCCCEEEeCCCcCcccc
Confidence 00000 00000 0111111000 0011222457899999999999987776644 8999999 64333
Q ss_pred CCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCCCCCeEEEEEecC--CCCCCHHHHH
Q 011690 206 HPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSW--TPDEDFGILL 283 (479)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~--~~~K~~~~li 283 (479)
.+.+..... ...++++ +++++|+. .+.||++.++
T Consensus 227 ~~~~~~~~~-------------------------------------------~~~~~~~-~il~v~~~~~~~~Kg~~~li 262 (405)
T PRK10125 227 AILAELPPV-------------------------------------------RETQGKP-KIAVVAHDLRYDGKTDQQLV 262 (405)
T ss_pred ccccccccc-------------------------------------------ccCCCCC-EEEEEEeccccCCccHHHHH
Confidence 222110000 0112333 68888883 4679999999
Q ss_pred HHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHH
Q 011690 284 EAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 363 (479)
Q Consensus 284 eA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~ 363 (479)
+|+..+ .++++|+|+|+|+... .++|.+.|..-+.+++.+
T Consensus 263 ~A~~~l------------------------------~~~~~L~ivG~g~~~~----------~~~v~~~g~~~~~~~l~~ 302 (405)
T PRK10125 263 REMMAL------------------------------GDKIELHTFGKFSPFT----------AGNVVNHGFETDKRKLMS 302 (405)
T ss_pred HHHHhC------------------------------CCCeEEEEEcCCCccc----------ccceEEecCcCCHHHHHH
Confidence 999875 3479999999986321 146888886235678999
Q ss_pred HHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe--CCHHHHHHHH
Q 011690 364 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQL 428 (479)
Q Consensus 364 ~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l 428 (479)
+|++||++|+| |..|+||++++||||||+|||+|+.||++|++.++ +|+++ .|+++||+.+
T Consensus 303 ~y~~aDvfV~p---S~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~ 365 (405)
T PRK10125 303 ALNQMDALVFS---SRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS 365 (405)
T ss_pred HHHhCCEEEEC---CccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHHHHHhcc
Confidence 99999999999 67899999999999999999999999999999775 89999 5789999854
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-27 Score=255.97 Aligned_cols=329 Identities=12% Similarity=0.073 Sum_probs=219.9
Q ss_pred CcceEEEEEecCC----CCChhHHHHHHHHHhhCCCcEEEEecC----CCCC-ccc--c--------------c-----C
Q 011690 3 RRGRACVVVLGDL----GRSPRMQYQALSLARQMSLEVDVVAYG----GSKP-HAA--I--------------L-----E 52 (479)
Q Consensus 3 ~~~~~~i~~~~~~----g~~~r~~~~a~~La~~~G~eV~Vv~~~----~~~~-~~~--~--------------~-----~ 52 (479)
..+-++||....+ |.+---...|..||+.-+++|++|.+= +... .++ . . -
T Consensus 321 ~~r~~~ivTtAslPWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~g~ 400 (794)
T PLN02501 321 GKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEERIGF 400 (794)
T ss_pred CCCeEEEEEcccCcccccccccHHHHHHHhcccCCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHhcCC
Confidence 3466777776544 455556677888888557899999641 1100 000 0 0 0
Q ss_pred CCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEE
Q 011690 53 HPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV 132 (479)
Q Consensus 53 ~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii 132 (479)
..+..|..+|.+- .. -.+...++..+.+.+.. .+|||||+++|..+...-.+..++...+ |+|.
T Consensus 401 ~~~~~i~fYpg~~--~~-~~~SI~p~gdI~~~L~~------------f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVa 464 (794)
T PLN02501 401 KADFKISFYPGKF--SK-ERRSIIPAGDTSQFIPS------------KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVG 464 (794)
T ss_pred CCCceEEeecchh--cc-CCccccchHHHHHHhhc------------cCCCEEEECCchhhccHHHHHHHHHHcC-CeEE
Confidence 1244555554110 00 11112234444555554 7999999999876554321444455556 8887
Q ss_pred EecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhh-cCCEEEEeCHHHHHHHHHhhCCeEEEecCC-CCCCCCCCCh
Q 011690 133 DWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGK-MANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSL 210 (479)
Q Consensus 133 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~ 210 (479)
.+|......+.. . ....+.++...+ +.+++.+ +||.++++|..+++ + ........|| |.++|.|...
T Consensus 465 syHTny~eYl~~-y-~~g~L~~~llk~----l~~~v~r~hcD~VIaPS~atq~-L----~~~vI~nVnGVDte~F~P~~r 533 (794)
T PLN02501 465 VVHTNYLEYIKR-E-KNGALQAFFVKH----INNWVTRAYCHKVLRLSAATQD-L----PKSVICNVHGVNPKFLKIGEK 533 (794)
T ss_pred EEeCCcHHHHhH-h-cchhHHHHHHHH----HHHHHHHhhCCEEEcCCHHHHH-h----cccceeecccccccccCCcch
Confidence 888654221111 1 112222222211 1233332 28999999988874 3 2222222268 8888988653
Q ss_pred HHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhH
Q 011690 211 EEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYD 290 (479)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~ 290 (479)
.... ..+ +..... ..++++||+.++||++.||+|++.+.
T Consensus 534 ~~~~---r~l-------------------------------------gi~~~~-kgiLfVGRLa~EKGld~LLeAla~L~ 572 (794)
T PLN02501 534 VAEE---REL-------------------------------------GQQAFS-KGAYFLGKMVWAKGYRELIDLLAKHK 572 (794)
T ss_pred hHHH---Hhc-------------------------------------CCcccc-CceEEEEcccccCCHHHHHHHHHHHH
Confidence 2111 111 121112 24789999999999999999999987
Q ss_pred HHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCE
Q 011690 291 RRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADL 370 (479)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi 370 (479)
++ .|+++|+|+|+||.++.+++.++++++ +|.|+|. .++...+|+++|+
T Consensus 573 ~~---------------------------~pnvrLvIVGDGP~reeLe~la~eLgL-~V~FLG~---~dd~~~lyasaDV 621 (794)
T PLN02501 573 NE---------------------------LDGFNLDVFGNGEDAHEVQRAAKRLDL-NLNFLKG---RDHADDSLHGYKV 621 (794)
T ss_pred hh---------------------------CCCeEEEEEcCCccHHHHHHHHHHcCC-EEEecCC---CCCHHHHHHhCCE
Confidence 65 789999999999999999999999887 4999998 7788899999999
Q ss_pred EEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEeCCHHHHHHHHHHHHhc
Q 011690 371 GVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKG 434 (479)
Q Consensus 371 ~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~ 434 (479)
||+| |..|+||++++||||||+|||+++.++. +.+.++.+|++..+++++++++.+++++
T Consensus 622 FVlP---S~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~~D~EafAeAI~~LLsd 681 (794)
T PLN02501 622 FINP---SISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTYKTSEDFVAKVKEALAN 681 (794)
T ss_pred EEEC---CCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEecCCHHHHHHHHHHHHhC
Confidence 9999 6779999999999999999999999886 4477888999889999999999999995
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=248.66 Aligned_cols=347 Identities=15% Similarity=0.157 Sum_probs=239.9
Q ss_pred CCChhHHHHHHHHHhh---CCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 011690 16 GRSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL 92 (479)
Q Consensus 16 g~~~r~~~~a~~La~~---~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 92 (479)
...++++.|+..|++. +||.|.|+|-..+....-.....|++++++|.... .+-..++. +...+.++
T Consensus 12 P~~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~--~n~tT~pt--------v~~~~Pll 81 (426)
T KOG1111|consen 12 PSTGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVG--YNQTTFPT--------VFSDFPLL 81 (426)
T ss_pred cCCCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeee--ecccchhh--------hhccCccc
Confidence 3456778887777666 79999999866554432333456799999983211 11111111 11112223
Q ss_pred HHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCch-hhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhc
Q 011690 93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG-YTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKM 171 (479)
Q Consensus 93 ~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 171 (479)
...+.+ ++..+||-|++.+.-. --+.+.++..|.+.++|-|.+. +.-.+ + ...... -++.+.+
T Consensus 82 r~i~lr-E~I~ivhghs~fS~la-he~l~hartMGlktVfTdHSlfGfad~~------s---i~~n~l-----l~~sL~~ 145 (426)
T KOG1111|consen 82 RPILLR-ERIEIVHGHSPFSYLA-HEALMHARTMGLKTVFTDHSLFGFADIG------S---ILTNKL-----LPLSLAN 145 (426)
T ss_pred chhhhh-hceEEEecCChHHHHH-HHHHHHHHhcCceEEEeccccccccchh------h---hhhcce-----eeeeecC
Confidence 333323 6899999998543322 1133456677899999999753 11000 0 011111 3344567
Q ss_pred CCEEEEeCHHHHHHHHHh--hCC-eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccc
Q 011690 172 ANGCLCVTQAMQHELAQN--WGI-KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADET 247 (479)
Q Consensus 172 ad~vi~vS~~~~~~l~~~--~~~-~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (479)
.|.+||+|...++-..-+ ... ++.+|||. +.+.|.|.+.+ ++
T Consensus 146 id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~-~~--------------------------------- 191 (426)
T KOG1111|consen 146 IDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAAD-KP--------------------------------- 191 (426)
T ss_pred CCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccc-cC---------------------------------
Confidence 999999999877543222 122 28999999 88889886532 11
Q ss_pred hhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEE
Q 011690 248 IFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII 327 (479)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~I 327 (479)
.+..+.++.++|+-+.||+|.|++++..+.++ +|+++|+|
T Consensus 192 -------------S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~---------------------------~p~vrfii 231 (426)
T KOG1111|consen 192 -------------SADIITIVVASRLVYRKGIDLLLEIIPSVCDK---------------------------HPEVRFII 231 (426)
T ss_pred -------------CCCeeEEEEEeeeeeccchHHHHHHHHHHHhc---------------------------CCCeeEEE
Confidence 12225789999999999999999999999986 99999999
Q ss_pred EecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccch
Q 011690 328 TGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 406 (479)
Q Consensus 328 vG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~ 406 (479)
+|+||.+..+++..+++.+ ++|.++|. ++.+++.+.|.+-|+|+.| |..|.|+++++|||+||+|||+|..||++
T Consensus 232 ~GDGPk~i~lee~lEk~~l~~rV~~lG~-v~h~~Vr~vl~~G~IFlnt---SlTEafc~~ivEAaScGL~VVsTrVGGIp 307 (426)
T KOG1111|consen 232 IGDGPKRIDLEEMLEKLFLQDRVVMLGT-VPHDRVRDVLVRGDIFLNT---SLTEAFCMVIVEAASCGLPVVSTRVGGIP 307 (426)
T ss_pred ecCCcccchHHHHHHHhhccCceEEecc-cchHHHHHHHhcCcEEecc---HHHHHHHHHHHHHHhCCCEEEEeecCCcc
Confidence 9999999999999999988 79999999 9999999999999999998 77899999999999999999999999999
Q ss_pred hccccCccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHH
Q 011690 407 ELVKVDKNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 474 (479)
Q Consensus 407 e~i~~~~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 474 (479)
|++-++ .-++. .+++++++++++.+......+ +.+-+...+ .++|.+.-+++ +++++++.
T Consensus 308 eVLP~d-~i~~~~~~~~dl~~~v~~ai~~~~~~p---~~~h~~v~~---~y~w~dVa~rT-ekvy~r~~ 368 (426)
T KOG1111|consen 308 EVLPED-MITLGEPGPDDLVGAVEKAITKLRTLP---LEFHDRVKK---MYSWKDVAERT-EKVYDRAA 368 (426)
T ss_pred ccCCcc-ceeccCCChHHHHHHHHHHHHHhccCc---hhHHHHHHH---hccHHHHHHHH-HHHHHHHh
Confidence 999554 22233 458999999998888432222 222333333 56676665543 44555443
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=246.06 Aligned_cols=266 Identities=18% Similarity=0.291 Sum_probs=205.7
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.++|+++++.+..... .+.......+.++.+|+.......... .......++.. ....+.+|.++++|
T Consensus 98 ~~~diii~~~~~~~~~----~~~~~~~~~~~i~~~h~~~~~~~~~~~--~~~~~~~~~~~------~~~~~~~d~ii~~s 165 (372)
T cd04949 98 TKPDVFILDRPTLDGQ----ALLNMKKAAKVVVVLHSNHVSDNNDPV--HSLINNFYEYV------FENLDKVDGVIVAT 165 (372)
T ss_pred CCCCEEEECCccccch----hHHhccCCceEEEEEChHHhCCccccc--ccccchhhHHH------HhChhhCCEEEEcc
Confidence 6899999998543322 123334456678889975421111000 11111122211 12236799999999
Q ss_pred HHHHHHHHHhhCCe--EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccc
Q 011690 180 QAMQHELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 256 (479)
Q Consensus 180 ~~~~~~l~~~~~~~--~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
+..++.+.+.++.. +.+|||+ +...+.+... .
T Consensus 166 ~~~~~~l~~~~~~~~~v~~ip~g~~~~~~~~~~~----~----------------------------------------- 200 (372)
T cd04949 166 EQQKQDLQKQFGNYNPIYTIPVGSIDPLKLPAQF----K----------------------------------------- 200 (372)
T ss_pred HHHHHHHHHHhCCCCceEEEcccccChhhcccch----h-----------------------------------------
Confidence 99999998887654 7899999 5444433210 0
Q ss_pred cccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHH
Q 011690 257 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 336 (479)
Q Consensus 257 ~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~ 336 (479)
..++..++++||+.+.||++.+|+|+..+.++ .|+++|+|+|.|+....
T Consensus 201 ----~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~ 249 (372)
T cd04949 201 ----QRKPHKIITVARLAPEKQLDQLIKAFAKVVKQ---------------------------VPDATLDIYGYGDEEEK 249 (372)
T ss_pred ----hcCCCeEEEEEccCcccCHHHHHHHHHHHHHh---------------------------CCCcEEEEEEeCchHHH
Confidence 11234789999999999999999999999876 89999999999999888
Q ss_pred HHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc-cchhccccCcc
Q 011690 337 YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKN 414 (479)
Q Consensus 337 l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~-~~~e~i~~~~~ 414 (479)
+++.++++++ ++|.|.|. .+++..+|+.||++|+| |..|++|++++|||+||+|||+++.+ +.++++.++.+
T Consensus 250 ~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~~---S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~ 323 (372)
T cd04949 250 LKELIEELGLEDYVFLKGY---TRDLDEVYQKAQLSLLT---SQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGEN 323 (372)
T ss_pred HHHHHHHcCCcceEEEcCC---CCCHHHHHhhhhEEEec---ccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCC
Confidence 9999988888 68999997 78999999999999999 66789999999999999999999977 78999999999
Q ss_pred EEEeC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHH
Q 011690 415 GLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE 463 (479)
Q Consensus 415 G~l~~--~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 463 (479)
|++++ |+++|+++|..+++ +++.++.+++++++....++|+..|+
T Consensus 324 G~lv~~~d~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 324 GYLVPKGDIEALAEAIIELLN----DPKLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred ceEeCCCcHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHhhHHHHHh
Confidence 99995 89999999999999 58899999999998766777776654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-26 Score=232.81 Aligned_cols=229 Identities=12% Similarity=0.125 Sum_probs=173.8
Q ss_pred cCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHH-hhcCCEEEEeCHHHHHHHHHh-hCC--eEEEecCC-
Q 011690 126 RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYY-GKMANGCLCVTQAMQHELAQN-WGI--KATVLYDQ- 200 (479)
Q Consensus 126 ~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~ad~vi~vS~~~~~~l~~~-~~~--~~~vi~n~- 200 (479)
.|.|+++++|+.. ++.+.+ +.++ .+.+|.++++|+.+++.+.+. .+. ++.+||||
T Consensus 68 ~~~~~v~e~~~~~---------------~l~~~~-----~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGV 127 (331)
T PHA01630 68 VGKNIVFEVADTD---------------AISHTA-----LYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNL 127 (331)
T ss_pred cCCceEEEEEeec---------------hhhHHH-----HHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCC
Confidence 4778999999843 122333 5556 678999999999999998765 222 48899999
Q ss_pred CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHH
Q 011690 201 PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFG 280 (479)
Q Consensus 201 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~ 280 (479)
|.+.|.+...+ .+.+.+++++|++.+.||++
T Consensus 128 d~~~f~~~~~~-------------------------------------------------~~~~~vl~~~g~~~~~Kg~d 158 (331)
T PHA01630 128 NPRMFEYKPKE-------------------------------------------------KPHPCVLAILPHSWDRKGGD 158 (331)
T ss_pred CHHHcCCCccc-------------------------------------------------cCCCEEEEEeccccccCCHH
Confidence 76666544210 12345777888999999999
Q ss_pred HHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcch
Q 011690 281 ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAED 360 (479)
Q Consensus 281 ~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~ 360 (479)
.||+|++.+.++ .++++|+|+|+|+....+ .++.. +.|. ++.++
T Consensus 159 ~Li~A~~~l~~~---------------------------~~~~~llivG~~~~~~~l------~~~~~--~~~~-v~~~~ 202 (331)
T PHA01630 159 IVVKIFHELQNE---------------------------GYDFYFLIKSSNMLDPRL------FGLNG--VKTP-LPDDD 202 (331)
T ss_pred HHHHHHHHHHhh---------------------------CCCEEEEEEeCcccchhh------ccccc--eecc-CCHHH
Confidence 999999999875 789999999977643321 12322 3565 88999
Q ss_pred HHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEeC---------------------
Q 011690 361 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--------------------- 419 (479)
Q Consensus 361 ~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~~--------------------- 419 (479)
+..+|+.||++++| |..|+||++++||||||+|||+|+.||.+|++.++.+|++++
T Consensus 203 l~~~y~~aDv~v~p---S~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~ 279 (331)
T PHA01630 203 IYSLFAGCDILFYP---VRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP 279 (331)
T ss_pred HHHHHHhCCEEEEC---CccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC
Confidence 99999999999999 667999999999999999999999999999999998877752
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHH
Q 011690 420 SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE 463 (479)
Q Consensus 420 ~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 463 (479)
+.+++++++.+++.+.. +++.++.++++++.....++|+..-+
T Consensus 280 ~~~~~~~~ii~~l~~~~-~~~~~~~~~~~~~~~~~~fs~~~ia~ 322 (331)
T PHA01630 280 DIEDAYQKLLEALANWT-PEKKKENLEGRAILYRENYSYNAIAK 322 (331)
T ss_pred CHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 56889999999988511 14556667777766566777755543
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=223.45 Aligned_cols=323 Identities=17% Similarity=0.143 Sum_probs=207.6
Q ss_pred ceEEEEEecCCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHH
Q 011690 5 GRACVVVLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (479)
Q Consensus 5 ~~~~i~~~~~~g~~~r-~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~ 83 (479)
+++++++.+ .|+..+ +...+..|.++ ||+|+|++...+... ...+..|+++++++.. ...... ....+.....
T Consensus 2 ~~i~i~~~g-~gG~~~~~~~la~~L~~~-g~ev~vv~~~~~~~~-~~~~~~g~~~~~~~~~--~~~~~~-~~~~l~~~~~ 75 (357)
T PRK00726 2 KKILLAGGG-TGGHVFPALALAEELKKR-GWEVLYLGTARGMEA-RLVPKAGIEFHFIPSG--GLRRKG-SLANLKAPFK 75 (357)
T ss_pred cEEEEEcCc-chHhhhHHHHHHHHHHhC-CCEEEEEECCCchhh-hccccCCCcEEEEecc--CcCCCC-hHHHHHHHHH
Confidence 345555433 343333 23556667664 999999997553212 2223368999999831 111111 1111222222
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHH
Q 011690 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLR 163 (479)
Q Consensus 84 ~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (479)
++..+. -+++++ +..+||+||+|++ ...+.+.++++..++|+|++.|+.. .. ..
T Consensus 76 ~~~~~~-~~~~~i-k~~~pDvv~~~~~---~~~~~~~~~~~~~~~p~v~~~~~~~----------~~-------~~---- 129 (357)
T PRK00726 76 LLKGVL-QARKIL-KRFKPDVVVGFGG---YVSGPGGLAARLLGIPLVIHEQNAV----------PG-------LA---- 129 (357)
T ss_pred HHHHHH-HHHHHH-HhcCCCEEEECCC---cchhHHHHHHHHcCCCEEEEcCCCC----------cc-------HH----
Confidence 222222 122233 3378999999983 2234455667778999987655432 01 11
Q ss_pred HHHHHhhcCCEEEEeCHHHHHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCc
Q 011690 164 IEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQ 242 (479)
Q Consensus 164 ~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (479)
+++.++.+|.++++++.+.. +.-+.++.+++|+ +.+.+.+.. .+..
T Consensus 130 -~r~~~~~~d~ii~~~~~~~~---~~~~~~i~vi~n~v~~~~~~~~~--~~~~--------------------------- 176 (357)
T PRK00726 130 -NKLLARFAKKVATAFPGAFP---EFFKPKAVVTGNPVREEILALAA--PPAR--------------------------- 176 (357)
T ss_pred -HHHHHHHhchheECchhhhh---ccCCCCEEEECCCCChHhhcccc--hhhh---------------------------
Confidence 45556779999999885532 2223459999999 544443321 1101
Q ss_pred ccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHH-HHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCC
Q 011690 243 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILL-EAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP 321 (479)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~li-eA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 321 (479)
++.+++.+ +++++|+..+.+++..++ +|++++.+ .+
T Consensus 177 --------------~~~~~~~~-~i~~~gg~~~~~~~~~~l~~a~~~~~~----------------------------~~ 213 (357)
T PRK00726 177 --------------LAGREGKP-TLLVVGGSQGARVLNEAVPEALALLPE----------------------------AL 213 (357)
T ss_pred --------------ccCCCCCe-EEEEECCcHhHHHHHHHHHHHHHHhhh----------------------------Cc
Confidence 12233444 667788777878876666 88887753 24
Q ss_pred CEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec
Q 011690 322 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 401 (479)
Q Consensus 322 ~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~ 401 (479)
..+.++|+|+. +.+++..+ ++++ |.|.|+ .+++.++|++||+++++ + | |++++|||+||+|||++.
T Consensus 214 -~~~~~~G~g~~-~~~~~~~~-~~~~-v~~~g~---~~~~~~~~~~~d~~i~~---~-g---~~~~~Ea~~~g~Pvv~~~ 279 (357)
T PRK00726 214 -QVIHQTGKGDL-EEVRAAYA-AGIN-AEVVPF---IDDMAAAYAAADLVICR---A-G---ASTVAELAAAGLPAILVP 279 (357)
T ss_pred -EEEEEcCCCcH-HHHHHHhh-cCCc-EEEeeh---HhhHHHHHHhCCEEEEC---C-C---HHHHHHHHHhCCCEEEec
Confidence 56789999975 45555555 7766 999998 58999999999999974 2 2 579999999999999987
Q ss_pred Ccc--------chhccccCccEEEe--CC--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 402 YSC--------IEELVKVDKNGLLF--SS--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 402 ~~~--------~~e~i~~~~~G~l~--~~--~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
.++ ..+.+.+..+|+++ ++ +++|+++|.++++ +++.+++|+++++++.
T Consensus 280 ~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~ 339 (357)
T PRK00726 280 LPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLS----DPERLEAMAEAARALG 339 (357)
T ss_pred CCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHc----CHHHHHHHHHHHHhcC
Confidence 532 24667778899998 34 8999999999999 5899999999998864
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-24 Score=222.16 Aligned_cols=307 Identities=19% Similarity=0.160 Sum_probs=200.8
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011690 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (479)
Q Consensus 23 ~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~ 102 (479)
..+..|.++ ||+|+|+|....... ......|+++++++........ ....+......+..+.. +.+++ +..+|
T Consensus 18 ~la~~l~~~-G~ev~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~i-~~~~p 90 (350)
T cd03785 18 ALAEELRER-GAEVLFLGTKRGLEA-RLVPKAGIPLHTIPVGGLRRKG---SLKKLKAPFKLLKGVLQ-ARKIL-KKFKP 90 (350)
T ss_pred HHHHHHHhC-CCEEEEEECCCcchh-hcccccCCceEEEEecCcCCCC---hHHHHHHHHHHHHHHHH-HHHHH-HhcCC
Confidence 556777775 999999987654222 2233457889988821111111 11111111111221111 12222 23789
Q ss_pred cEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHH
Q 011690 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAM 182 (479)
Q Consensus 103 DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 182 (479)
|+||++++.. .+.+.++++..++|+++..|+.. . ... ++++++.+|.++++|+.+
T Consensus 91 DvI~~~~~~~---~~~~~~~a~~~~~p~v~~~~~~~----------~-------~~~-----~~~~~~~~~~vi~~s~~~ 145 (350)
T cd03785 91 DVVVGFGGYV---SGPVGLAAKLLGIPLVIHEQNAV----------P-------GLA-----NRLLARFADRVALSFPET 145 (350)
T ss_pred CEEEECCCCc---chHHHHHHHHhCCCEEEEcCCCC----------c-------cHH-----HHHHHHhhCEEEEcchhh
Confidence 9999998432 33445667778999887544321 0 011 445567799999999998
Q ss_pred HHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCC
Q 011690 183 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 261 (479)
Q Consensus 183 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (479)
.++ ..+.++.+++|+ +.+.|.+.+. +. .+++++
T Consensus 146 ~~~---~~~~~~~~i~n~v~~~~~~~~~~--~~-----------------------------------------~~~~~~ 179 (350)
T cd03785 146 AKY---FPKDKAVVTGNPVREEILALDRE--RA-----------------------------------------RLGLRP 179 (350)
T ss_pred hhc---CCCCcEEEECCCCchHHhhhhhh--HH-----------------------------------------hcCCCC
Confidence 876 223458899999 5555543221 11 112444
Q ss_pred CCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEE-EEEEecCCChHHHHH
Q 011690 262 NRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDKESYEE 339 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-l~IvG~G~~~~~l~~ 339 (479)
+.+ ++++.|+....|+... +++|+..+.+ +++. ++++|+| ..+.+++
T Consensus 180 ~~~-~i~~~~g~~~~~~~~~~l~~a~~~l~~-----------------------------~~~~~~~i~G~g-~~~~l~~ 228 (350)
T cd03785 180 GKP-TLLVFGGSQGARAINEAVPEALAELLR-----------------------------KRLQVIHQTGKG-DLEEVKK 228 (350)
T ss_pred CCe-EEEEECCcHhHHHHHHHHHHHHHHhhc-----------------------------cCeEEEEEcCCc-cHHHHHH
Confidence 555 5555555555566654 4577777642 3455 5688998 5678888
Q ss_pred HHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc--------chhcccc
Q 011690 340 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--------IEELVKV 411 (479)
Q Consensus 340 ~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~--------~~e~i~~ 411 (479)
.++++ .++|.|.|. .+++.++|+.||++|++ + + +++++|||++|+|||+++.++ ..+.+.+
T Consensus 229 ~~~~~-~~~v~~~g~---~~~~~~~l~~ad~~v~~---s-g---~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~ 297 (350)
T cd03785 229 AYEEL-GVNYEVFPF---IDDMAAAYAAADLVISR---A-G---ASTVAELAALGLPAILIPLPYAADDHQTANARALVK 297 (350)
T ss_pred HHhcc-CCCeEEeeh---hhhHHHHHHhcCEEEEC---C-C---HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh
Confidence 88776 478999997 48999999999999974 2 2 569999999999999987543 2466667
Q ss_pred CccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 412 DKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 412 ~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+.+|++++ ++++++++|..+++ +++.++.|+.++++..
T Consensus 298 ~g~g~~v~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~ 339 (350)
T cd03785 298 AGAAVLIPQEELTPERLAAALLELLS----DPERLKAMAEAARSLA 339 (350)
T ss_pred CCCEEEEecCCCCHHHHHHHHHHHhc----CHHHHHHHHHHHHhcC
Confidence 78999984 79999999999998 6899999999998854
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-24 Score=220.32 Aligned_cols=356 Identities=15% Similarity=0.102 Sum_probs=209.3
Q ss_pred CCCcceEEEEEecCCC-CChhHHHHHHHHHhhCCCcEEEEecCCC--CCcccccCCCCeEEEEeecC-CCCCCC--CCch
Q 011690 1 MGRRGRACVVVLGDLG-RSPRMQYQALSLARQMSLEVDVVAYGGS--KPHAAILEHPSIHIHTMTQW-PTIPRG--LPKV 74 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g-~~~r~~~~a~~La~~~G~eV~Vv~~~~~--~~~~~~~~~~gi~i~~~~~~-~~~~~~--~~~~ 74 (479)
|...+.+.++...+.+ ...|-|..+..|+++ ||.|.-|...+- .+. ....+..++...... ...... ....
T Consensus 1 ~~~~~~~~~~~~~~w~~~~~~~qhl~~~~a~~-~~~vl~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (373)
T cd04950 1 MADRPDILVFSADDWDFLWQRPQHLAARLAER-GNRVLYVEPPGLSRTPQ--PRGRDWVRVVLRLRAALRRPRRLDPLIP 77 (373)
T ss_pred CCCCCeEEEecccCcCCCCCCHHHHHHHHHhC-CCeEEEEeCCCccCCCC--CCCcccEEeeecccccccCccccCcccc
Confidence 3344433333333444 467889999999975 999998876542 221 112233333322100 000000 0000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHH
Q 011690 75 LKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS 154 (479)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~ 154 (479)
........+.+...+ .+... +..-.|.|+..++|.. . .++....+.++|++.++....... ...
T Consensus 78 ~~~~~~~~~~~~~~~--~~~~~-~~~~~~~i~~~~~P~~-~----~~~~~~~~~~~Vyd~~D~~~~~~~----~~~---- 141 (373)
T cd04950 78 ARRRRLLRLLLNALL--FWAQL-ELGFGRPILWYYTPYT-L----PVAALLQASLVVYDCVDDLSAFPG----GPP---- 141 (373)
T ss_pred chhhhHHHHHHHHHH--HHHHH-hcCCCCcEEEEeCccH-H----HHHhhcCCCeEEEEcccchhccCC----CCH----
Confidence 111122222222211 11111 2233444444443322 1 233336678899988875422111 011
Q ss_pred HHHHHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCcccc
Q 011690 155 IYRCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDC 233 (479)
Q Consensus 155 ~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (479)
..... |+.+.+.||.|+++|+.+++.+.+. +.++.+|+|| |.+.|.+....... . ..
T Consensus 142 ~~~~~-----e~~~~~~ad~vi~~S~~l~~~~~~~-~~~i~~i~ngvd~~~f~~~~~~~~~-~-~~-------------- 199 (373)
T cd04950 142 ELLEA-----ERRLLKRADLVFTTSPSLYEAKRRL-NPNVVLVPNGVDYEHFAAARDPPPP-P-AD-------------- 199 (373)
T ss_pred HHHHH-----HHHHHHhCCEEEECCHHHHHHHhhC-CCCEEEcccccCHHHhhcccccCCC-h-hH--------------
Confidence 11133 8888899999999999999887665 6669999999 76677654321100 0 00
Q ss_pred ccccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhc
Q 011690 234 VSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEIS 313 (479)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 313 (479)
....+++ .++|+|++.+.++++.+.++++ +
T Consensus 200 ------------------------~~~~~~~-~i~y~G~l~~~~d~~ll~~la~----~--------------------- 229 (373)
T cd04950 200 ------------------------LAALPRP-VIGYYGAIAEWLDLELLEALAK----A--------------------- 229 (373)
T ss_pred ------------------------HhcCCCC-EEEEEeccccccCHHHHHHHHH----H---------------------
Confidence 0112344 8999999999888776554443 2
Q ss_pred cCcccCCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCC--CCCCCcHHHHHHH
Q 011690 314 DGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMF 391 (479)
Q Consensus 314 ~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s--~~e~~p~~llEam 391 (479)
.|+++|+|+|.|+..... ......+||.|+|. ++.++++.+++.+|++++|+..+ ...++|+|++|||
T Consensus 230 ------~p~~~~vliG~~~~~~~~---~~~~~~~nV~~~G~-~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~Eyl 299 (373)
T cd04950 230 ------RPDWSFVLIGPVDVSIDP---SALLRLPNVHYLGP-KPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYL 299 (373)
T ss_pred ------CCCCEEEEECCCcCccCh---hHhccCCCEEEeCC-CCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHh
Confidence 689999999998332222 22223589999997 99999999999999999996544 3456899999999
Q ss_pred hCCCcEEEecCccchhccccCccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHH
Q 011690 392 GCGLPVCAVSYSCIEELVKVDKNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 466 (479)
Q Consensus 392 a~G~PVIas~~~~~~e~i~~~~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 466 (479)
|||+|||+|+.++ +++....+++. +|+++++++|.+++... ++...+..++ ....++|+...++..
T Consensus 300 A~G~PVVat~~~~---~~~~~~~~~~~~~d~~~~~~ai~~~l~~~--~~~~~~~~~~----~~~~~sW~~~a~~~~ 366 (373)
T cd04950 300 AAGKPVVATPLPE---VRRYEDEVVLIADDPEEFVAAIEKALLED--GPARERRRLR----LAAQNSWDARAAEML 366 (373)
T ss_pred ccCCCEEecCcHH---HHhhcCcEEEeCCCHHHHHHHHHHHHhcC--CchHHHHHHH----HHHHCCHHHHHHHHH
Confidence 9999999998654 44444455555 67999999999976641 1222222211 233677777666544
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-24 Score=217.22 Aligned_cols=303 Identities=16% Similarity=0.150 Sum_probs=193.0
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011690 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (479)
Q Consensus 23 ~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~ 102 (479)
..+..|.++ ||||+|+|...... .......|+++++++ ....... .....+......+..+.. +..++ +..+|
T Consensus 19 ~La~~L~~~-g~eV~vv~~~~~~~-~~~~~~~g~~~~~i~--~~~~~~~-~~~~~l~~~~~~~~~~~~-l~~~i-~~~~p 91 (348)
T TIGR01133 19 AVAEELIKR-GVEVLWLGTKRGLE-KRLVPKAGIEFYFIP--VGGLRRK-GSFRLIKTPLKLLKAVFQ-ARRIL-KKFKP 91 (348)
T ss_pred HHHHHHHhC-CCEEEEEeCCCcch-hcccccCCCceEEEe--ccCcCCC-ChHHHHHHHHHHHHHHHH-HHHHH-HhcCC
Confidence 556777775 99999998643321 122234689999988 2221111 111112111111111111 12222 33899
Q ss_pred cEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHH
Q 011690 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAM 182 (479)
Q Consensus 103 DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 182 (479)
|+||++++. ..+.+.++++..++|+|+..++.. . .+. ++++++.+|.++++|+.+
T Consensus 92 DvVi~~~~~---~~~~~~~~~~~~~~p~v~~~~~~~----------~-------~~~-----~~~~~~~~d~ii~~~~~~ 146 (348)
T TIGR01133 92 DAVIGFGGY---VSGPAGLAAKLLGIPLFHHEQNAV----------P-------GLT-----NKLLSRFAKKVLISFPGA 146 (348)
T ss_pred CEEEEcCCc---ccHHHHHHHHHcCCCEEEECCCCC----------c-------cHH-----HHHHHHHhCeeEECchhH
Confidence 999999732 233444566777889875333221 0 111 455567899999999988
Q ss_pred HHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCC
Q 011690 183 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 261 (479)
Q Consensus 183 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (479)
++++ +..+++|+ +...+.+.. .+.. +++++
T Consensus 147 ~~~~------~~~~i~n~v~~~~~~~~~--~~~~-----------------------------------------~~~~~ 177 (348)
T TIGR01133 147 KDHF------EAVLVGNPVRQEIRSLPV--PRER-----------------------------------------FGLRE 177 (348)
T ss_pred hhcC------CceEEcCCcCHHHhcccc--hhhh-----------------------------------------cCCCC
Confidence 7654 34788998 433333221 1111 12334
Q ss_pred CCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE-EEEecCCChHHHHH
Q 011690 262 NRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEE 339 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-~IvG~G~~~~~l~~ 339 (479)
+.+ +++++|+....|++.. +++|++.+.++ ++++ +++|+|+ .+.+++
T Consensus 178 ~~~-~i~~~gg~~~~~~~~~~l~~a~~~l~~~-----------------------------~~~~~~~~g~~~-~~~l~~ 226 (348)
T TIGR01133 178 GKP-TILVLGGSQGAKILNELVPKALAKLAEK-----------------------------GIQIVHQTGKND-LEKVKN 226 (348)
T ss_pred CCe-EEEEECCchhHHHHHHHHHHHHHHHhhc-----------------------------CcEEEEECCcch-HHHHHH
Confidence 444 6778887777788655 55788777532 3444 4556554 478888
Q ss_pred HHHHcCCCc-EEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc-------chhcccc
Q 011690 340 KIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-------IEELVKV 411 (479)
Q Consensus 340 ~~~~~~l~~-V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~-------~~e~i~~ 411 (479)
.++++++.+ +.|. . . ++.++|++||++|.+ + | |++++|||++|+|+|+++.++ ..+++.+
T Consensus 227 ~~~~~~l~~~v~~~-~---~-~~~~~l~~ad~~v~~---~-g---~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~ 294 (348)
T TIGR01133 227 VYQELGIEAIVTFI-D---E-NMAAAYAAADLVISR---A-G---ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED 294 (348)
T ss_pred HHhhCCceEEecCc-c---c-CHHHHHHhCCEEEEC---C-C---hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH
Confidence 888887744 3443 2 3 899999999999974 2 2 679999999999999997643 2367888
Q ss_pred CccEEEe--C--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 412 DKNGLLF--S--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 412 ~~~G~l~--~--~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+.+|+++ + ++++|+++|.++++ |++.+++|+++++++.
T Consensus 295 ~~~G~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~ 336 (348)
T TIGR01133 295 LGAGLVIRQKELLPEKLLEALLKLLL----DPANLEAMAEAARKLA 336 (348)
T ss_pred CCCEEEEecccCCHHHHHHHHHHHHc----CHHHHHHHHHHHHhcC
Confidence 9999998 3 39999999999998 6899999999998754
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-23 Score=221.77 Aligned_cols=262 Identities=16% Similarity=0.190 Sum_probs=181.2
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+++++.....+. ....++..++|+++..|..... ....++.+.++ .+.+++.+|.++++|
T Consensus 123 ~~Pd~v~~~~~~~~~~---~l~~~~~~~ip~vl~~~~~~~~--------s~~~~~~~~~~-----~r~~~~~~d~ii~~S 186 (425)
T PRK05749 123 WRPKLVIIMETELWPN---LIAELKRRGIPLVLANARLSER--------SFKRYQKFKRF-----YRLLFKNIDLVLAQS 186 (425)
T ss_pred hCCCEEEEEecchhHH---HHHHHHHCCCCEEEEeccCChh--------hHHHHHHHHHH-----HHHHHHhCCEEEECC
Confidence 7999999886432222 2223456789988865433210 00111122333 666778899999999
Q ss_pred HHHHHHHHHhhCCe--EEEecCCCCCCCCCCC-hHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccc
Q 011690 180 QAMQHELAQNWGIK--ATVLYDQPPEFFHPTS-LEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 256 (479)
Q Consensus 180 ~~~~~~l~~~~~~~--~~vi~n~~~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
+.+++.+.+. |.+ +.+++|.+.+.+.+.. ......+..+
T Consensus 187 ~~~~~~l~~~-g~~~~i~vi~n~~~d~~~~~~~~~~~~~~r~~------------------------------------- 228 (425)
T PRK05749 187 EEDAERFLAL-GAKNEVTVTGNLKFDIEVPPELAARAATLRRQ------------------------------------- 228 (425)
T ss_pred HHHHHHHHHc-CCCCCcEecccccccCCCChhhHHHHHHHHHH-------------------------------------
Confidence 9999998775 643 6778886433332221 1111222111
Q ss_pred cccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh-H
Q 011690 257 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-E 335 (479)
Q Consensus 257 ~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~-~ 335 (479)
++ ++++ +++++|+. .|+.+.+++|++.+.++ +|+++|+|+|+|+.+ +
T Consensus 229 ~~--~~~~-vil~~~~~--~~~~~~ll~A~~~l~~~---------------------------~~~~~liivG~g~~r~~ 276 (425)
T PRK05749 229 LA--PNRP-VWIAASTH--EGEEELVLDAHRALLKQ---------------------------FPNLLLILVPRHPERFK 276 (425)
T ss_pred hc--CCCc-EEEEeCCC--chHHHHHHHHHHHHHHh---------------------------CCCcEEEEcCCChhhHH
Confidence 11 3444 56677754 57899999999998765 899999999999986 7
Q ss_pred HHHHHHHHcCCCcEEEecCCCC-----------cchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC-c
Q 011690 336 SYEEKIRRLRLKRVAFRTMWLS-----------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-S 403 (479)
Q Consensus 336 ~l~~~~~~~~l~~V~f~G~~~~-----------~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~-~ 403 (479)
.+++.++++|++.+.|.|...+ .+++..+|+.||+++++ .|..+++|.+++|||+||+|||+++. +
T Consensus 277 ~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~--~S~~e~~g~~~lEAma~G~PVI~g~~~~ 354 (425)
T PRK05749 277 EVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVG--GSLVKRGGHNPLEPAAFGVPVISGPHTF 354 (425)
T ss_pred HHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEEC--CCcCCCCCCCHHHHHHhCCCEEECCCcc
Confidence 8999999999876666653121 45899999999997764 24456688899999999999999863 5
Q ss_pred cchhccccC-ccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 404 CIEELVKVD-KNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 404 ~~~e~i~~~-~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+.+|+++.. .+|+++ +|+++|+++|.++++ |++.+++|++++++..
T Consensus 355 ~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~----~~~~~~~m~~~a~~~~ 403 (425)
T PRK05749 355 NFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLT----DPDARQAYGEAGVAFL 403 (425)
T ss_pred CHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHH
Confidence 566655432 345544 889999999999998 6999999999998854
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-23 Score=210.96 Aligned_cols=252 Identities=13% Similarity=0.161 Sum_probs=173.6
Q ss_pred EeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHHHHHH
Q 011690 107 VQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHEL 186 (479)
Q Consensus 107 ~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l 186 (479)
-..||++...++.. -....+.+++.++|+.. . ...+ .+.+.+ .+.+|++|+.+++.+
T Consensus 51 ~~~~~~~~~~~~~~-~~~~~~~~~~tt~~g~~-~---------------~~~y-----~~~m~~-~~~vIavS~~t~~~L 107 (335)
T PHA01633 51 PFHPPSLNPYLYAY-YQFKGKKYFYTTCDGIP-N---------------IEIV-----NKYLLQ-DVKFIPNSKFSAENL 107 (335)
T ss_pred ecCCcccchHHhhh-hhhcCCCceEEeeCCcC-c---------------hHHH-----HHHHhc-CCEEEeCCHHHHHHH
Confidence 34566554433332 12223567888899875 1 0233 444545 568899999999999
Q ss_pred HHhhCCe-EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCCCCC
Q 011690 187 AQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRP 264 (479)
Q Consensus 187 ~~~~~~~-~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (479)
.+. |++ ..+|++| +.+.|.|... ...++.++++ ......
T Consensus 108 ~~~-G~~~~i~I~~GVD~~~f~p~~~-~~~~~r~~~~-------------------------------------~~~~~~ 148 (335)
T PHA01633 108 QEV-GLQVDLPVFHGINFKIVENAEK-LVPQLKQKLD-------------------------------------KDFPDT 148 (335)
T ss_pred HHh-CCCCceeeeCCCChhhcCccch-hhHHHHHHhC-------------------------------------cCCCCC
Confidence 875 664 3457788 7777876531 1122222221 111123
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCC----CEEEEEEecCCChHHHHHH
Q 011690 265 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP----RLLFIITGKGPDKESYEEK 340 (479)
Q Consensus 265 ~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~l~IvG~G~~~~~l~~~ 340 (479)
.+++++||+.++||++.|++|++.+.++ .| +++++++|++ .
T Consensus 149 ~~i~~vGRl~~~KG~~~LI~A~~~L~~~---------------------------~p~~~~~i~l~ivG~~--------~ 193 (335)
T PHA01633 149 IKFGIVSGLTKRKNMDLMLQVFNELNTK---------------------------YPDIAKKIHFFVISHK--------Q 193 (335)
T ss_pred eEEEEEeCCccccCHHHHHHHHHHHHHh---------------------------CCCccccEEEEEEcHH--------H
Confidence 4889999999999999999999999875 55 4688888742 3
Q ss_pred HHHcCC-CcEEEecC--CCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhcccc------
Q 011690 341 IRRLRL-KRVAFRTM--WLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV------ 411 (479)
Q Consensus 341 ~~~~~l-~~V~f~G~--~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~------ 411 (479)
.+++++ ++|.|.|. +++.+++.++|++||++|+| |..|+||++++|||+||+|||+++.++++|++..
T Consensus 194 ~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~P---S~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li 270 (335)
T PHA01633 194 FTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVP---SGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLI 270 (335)
T ss_pred HHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEEC---CccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceee
Confidence 455677 68999952 26789999999999999999 6679999999999999999999999998886541
Q ss_pred ------------CccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHH
Q 011690 412 ------------DKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE 463 (479)
Q Consensus 412 ------------~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 463 (479)
+.+|+++ .+++++|++|.+++... +++.+ +.++++....++|+.-.+
T Consensus 271 ~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~--~~~~~---~~~~~~~a~~f~~~~~~~ 331 (335)
T PHA01633 271 KSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQ--DREER---SMKLKELAKKYDIRNLYT 331 (335)
T ss_pred CCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhcc--Chhhh---hHHHHHHHHhcCHHHHHH
Confidence 2347777 47999999999997751 23332 334444444676654433
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-21 Score=201.40 Aligned_cols=251 Identities=12% Similarity=0.082 Sum_probs=170.1
Q ss_pred cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 99 ~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
..+||+||++.|. ..+..+ ..+...++|++...+++. .. .+++.+.+|.++++
T Consensus 102 ~~~pD~Vi~~~~~--~~~~~~-~~~~~~~ip~~~~~td~~----------~~--------------~~~~~~~ad~i~~~ 154 (380)
T PRK13609 102 AEKPDIVINTFPI--IAVPEL-KKQTGISIPTYNVLTDFC----------LH--------------KIWVHREVDRYFVA 154 (380)
T ss_pred HhCcCEEEEcChH--HHHHHH-HHhcCCCCCeEEEeCCCC----------CC--------------cccccCCCCEEEEC
Confidence 3799999998742 122211 122334688765444433 00 11234689999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 255 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (479)
|+.+++.+.+. |++ +.++.+...+.|.+... +..++.
T Consensus 155 s~~~~~~l~~~-gi~~~ki~v~G~p~~~~f~~~~~--~~~~~~------------------------------------- 194 (380)
T PRK13609 155 TDHVKKVLVDI-GVPPEQVVETGIPIRSSFELKIN--PDIIYN------------------------------------- 194 (380)
T ss_pred CHHHHHHHHHc-CCChhHEEEECcccChHHcCcCC--HHHHHH-------------------------------------
Confidence 99999998775 764 66665542233432211 112222
Q ss_pred ccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEe-cC-CC
Q 011690 256 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KG-PD 333 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG-~G-~~ 333 (479)
.+++.++++.++++.|++...|++..+++++.. .++++++++| .+ +.
T Consensus 195 ~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~-------------------------------~~~~~~viv~G~~~~~ 243 (380)
T PRK13609 195 KYQLCPNKKILLIMAGAHGVLGNVKELCQSLMS-------------------------------VPDLQVVVVCGKNEAL 243 (380)
T ss_pred HcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhh-------------------------------CCCcEEEEEeCCCHHH
Confidence 234556677788888999989999998887642 4678988764 33 35
Q ss_pred hHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-Cccc----hhc
Q 011690 334 KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCI----EEL 408 (479)
Q Consensus 334 ~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~~----~e~ 408 (479)
.+.+++.+++++ ++|.|+|+ .+++.++|++||+++.. + .|++++|||+||+|||+++ .++. .+.
T Consensus 244 ~~~l~~~~~~~~-~~v~~~g~---~~~~~~l~~~aD~~v~~---~----gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~ 312 (380)
T PRK13609 244 KQSLEDLQETNP-DALKVFGY---VENIDELFRVTSCMITK---P----GGITLSEAAALGVPVILYKPVPGQEKENAMY 312 (380)
T ss_pred HHHHHHHHhcCC-CcEEEEec---hhhHHHHHHhccEEEeC---C----CchHHHHHHHhCCCEEECCCCCCcchHHHHH
Confidence 677777776655 68999998 56899999999998841 1 2669999999999999986 4542 234
Q ss_pred cccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHH
Q 011690 409 VKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 462 (479)
Q Consensus 409 i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 462 (479)
+.....|+...++++++++|.++++ +++.+++|++++++.....+++...
T Consensus 313 ~~~~G~~~~~~~~~~l~~~i~~ll~----~~~~~~~m~~~~~~~~~~~s~~~i~ 362 (380)
T PRK13609 313 FERKGAAVVIRDDEEVFAKTEALLQ----DDMKLLQMKEAMKSLYLPEPADHIV 362 (380)
T ss_pred HHhCCcEEEECCHHHHHHHHHHHHC----CHHHHHHHHHHHHHhCCCchHHHHH
Confidence 5444556666899999999999999 5889999999988855444444333
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=199.53 Aligned_cols=241 Identities=12% Similarity=0.118 Sum_probs=168.4
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHh--cCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLC 177 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~--~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 177 (479)
.+-|+||+|+|+.....+...++++. .++|+|+++|+..... ...... .+.+ |+.+++.||.+|+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~----~~~~~~----~~~~-----~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR----FDSNYY----LMKE-----EIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh----ccccch----hhHH-----HHHHHHhCCEEEE
Confidence 34499999998755422222232222 2799999999975211 110111 1233 7788899999999
Q ss_pred eCHHHHHHHHHhhCCe---EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 178 VTQAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 178 vS~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
+|+.+++++.+. |.+ +.++++.+.... .. .+ .
T Consensus 130 ~S~~~~~~l~~~-g~~~~~i~~~~~~~~~~~--~~--~~-~--------------------------------------- 164 (333)
T PRK09814 130 HSKKMKDRLVEE-GLTTDKIIVQGIFDYLND--IE--LV-K--------------------------------------- 164 (333)
T ss_pred CCHHHHHHHHHc-CCCcCceEeccccccccc--cc--cc-c---------------------------------------
Confidence 999999999776 653 555555431100 00 00 0
Q ss_pred cccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh
Q 011690 255 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 334 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~ 334 (479)
...+ ...++|+|++...+. +.+. .++++|+|+|+|+..
T Consensus 165 ----~~~~-~~~i~yaG~l~k~~~----------l~~~---------------------------~~~~~l~i~G~g~~~ 202 (333)
T PRK09814 165 ----TPSF-QKKINFAGNLEKSPF----------LKNW---------------------------SQGIKLTVFGPNPED 202 (333)
T ss_pred ----cccC-CceEEEecChhhchH----------HHhc---------------------------CCCCeEEEECCCccc
Confidence 0012 237999999983221 1111 467999999999864
Q ss_pred HHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccC----C----CCCCCcHHHHHHHhCCCcEEEecCccch
Q 011690 335 ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS----S----SGLDLPMKVVDMFGCGLPVCAVSYSCIE 406 (479)
Q Consensus 335 ~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~----s----~~e~~p~~llEama~G~PVIas~~~~~~ 406 (479)
+ ...++|.|.|. ++.++++.+|+. |+++++... + ....+|.|+.|+||||+|||+++.++..
T Consensus 203 ~--------~~~~~V~f~G~-~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~ 272 (333)
T PRK09814 203 L--------ENSANISYKGW-FDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIA 272 (333)
T ss_pred c--------ccCCCeEEecC-CCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHH
Confidence 4 12378999996 999999999998 887775322 0 1356899999999999999999999999
Q ss_pred hccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhh
Q 011690 407 ELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSA 456 (479)
Q Consensus 407 e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
++|+++.+|+++++.++++++|..+ . ++++++|++++++.....
T Consensus 273 ~~V~~~~~G~~v~~~~el~~~l~~~-~-----~~~~~~m~~n~~~~~~~~ 316 (333)
T PRK09814 273 DFIVENGLGFVVDSLEELPEIIDNI-T-----EEEYQEMVENVKKISKLL 316 (333)
T ss_pred HHHHhCCceEEeCCHHHHHHHHHhc-C-----HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999874 2 477899999999865333
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.7e-21 Score=204.61 Aligned_cols=325 Identities=17% Similarity=0.132 Sum_probs=200.1
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHH-HhcCCcEEEEecCchhhhhhhhcCCCchhH---------------HHHHHHhHHH
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLGRRSHFV---------------SIYRCFSVLR 163 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~-~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 163 (479)
.++|++|+|. +.+..++..++ ...++|+|+|.|...+-.. +..+. ..+. .+... -.
T Consensus 147 ~~~dViH~He---Wm~g~a~~~lK~~~~~VptVfTtHAT~~GR~-l~~g~-~~~y~~l~~~~~d~eA~~~~I~~r---~~ 218 (590)
T cd03793 147 EPAVVAHFHE---WQAGVGLPLLRKRKVDVSTIFTTHATLLGRY-LCAGN-VDFYNNLDYFDVDKEAGKRGIYHR---YC 218 (590)
T ss_pred CCCeEEEEcc---hhHhHHHHHHHHhCCCCCEEEEecccccccc-cccCC-cccchhhhhcchhhhhhcccchHH---HH
Confidence 5799999999 66666666666 4568899999996431100 00010 0111 01111 12
Q ss_pred HHHHHhhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCC-CCCCCCCCChH-HHH-HHHHhhhhcccCCCCcccccccccc
Q 011690 164 IEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLE-EKH-ELFCRLNKILHQPLGVQDCVSNAGM 239 (479)
Q Consensus 164 ~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (479)
+|+.....||.+++||+.++.+....++.+ -.|+||| +.+.|.+.... ..+ ....++.
T Consensus 219 iE~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~ViPNGid~~~f~~~~e~~~~~~~~k~ki~------------------ 280 (590)
T cd03793 219 IERAAAHCAHVFTTVSEITAYEAEHLLKRKPDVVLPNGLNVKKFSALHEFQNLHAQSKEKIN------------------ 280 (590)
T ss_pred HHHHHHhhCCEEEECChHHHHHHHHHhCCCCCEEeCCCcchhhcccchhhhhhhHHhhhhhh------------------
Confidence 499999999999999999999999999887 4599999 77777665311 111 1111111
Q ss_pred CCcccccchh-ccccccccccCCCCCeEEEEEecCCC-CCCHHHHHHHHHHhHHHHhhhhccC----------CCch---
Q 011690 240 EGQKADETIF-TSLAGIDVFLKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNED----------DSTN--- 304 (479)
Q Consensus 240 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~g~~~~-~K~~~~lieA~~~l~~~~~~~~~~~----------~~~~--- 304 (479)
.| .+..++.+++.+++++++..+||+.. +||++.+|+|+..+..++.+. ++| .-||
T Consensus 281 --------~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~-~~~~tVvafii~p~~~~~~~ 351 (590)
T cd03793 281 --------EFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVE-GSDTTVVAFFIMPAKTNNFN 351 (590)
T ss_pred --------HHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhc-CCCCeEEEEEEecCccCCcC
Confidence 11 11123445666677744444899998 999999999999998863331 110 0011
Q ss_pred h-----hhhHhhhccCcc-------------------------------------------cCCCCEEEEEEecCCChHH
Q 011690 305 E-----EVFLKEISDGKQ-------------------------------------------YLYPRLLFIITGKGPDKES 336 (479)
Q Consensus 305 ~-----~~~~~~~~~~~~-------------------------------------------~~~p~~~l~IvG~G~~~~~ 336 (479)
. +.+.+++++.-. ...|.+.=.-+ .....+.
T Consensus 352 ~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~-~~~~~D~ 430 (590)
T cd03793 352 VESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNM-VDDANDP 430 (590)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecC-CcCccCH
Confidence 1 111111111100 01111111111 1123445
Q ss_pred HHHHHHHcCC-C------cEEEecCCCCcc------hHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc
Q 011690 337 YEEKIRRLRL-K------RVAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 403 (479)
Q Consensus 337 l~~~~~~~~l-~------~V~f~G~~~~~~------~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~ 403 (479)
+-..+++.++ + +|+|...|++.. ++.++++.||++|+| |..|+||++++||||||+|||+|+.+
T Consensus 431 il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~P---S~yE~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 431 ILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFP---SYYEPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred HHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEec---cccCCCCcHHHHHHHcCCCEEEccCc
Confidence 6667777766 2 377877666543 689999999999999 77799999999999999999999999
Q ss_pred cc----hhccccC-ccEEEeC---------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHH
Q 011690 404 CI----EELVKVD-KNGLLFS---------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHA 466 (479)
Q Consensus 404 ~~----~e~i~~~-~~G~l~~---------~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 466 (479)
|+ +|++.++ ..|+.+. ++++|+++|.++++. +...+...+..+.+....++|+.....+.
T Consensus 508 gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~---~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~ 581 (590)
T cd03793 508 GFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL---SRRQRIIQRNRTERLSDLLDWRNLGRYYR 581 (590)
T ss_pred chhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 88 5666554 3566662 267888888888863 22333333334345445677766554433
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-22 Score=183.83 Aligned_cols=156 Identities=24% Similarity=0.419 Sum_probs=140.3
Q ss_pred CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHH
Q 011690 262 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 341 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~ 341 (479)
+++.+|+++|++.+.||++.+++|+..+.++ ..+++.|+|+|+++....++..+
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~--------------------------~~~~~~l~i~G~~~~~~~~~~~~ 66 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEK--------------------------KNPNYKLVIVGDGEYKKELKNLI 66 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHH--------------------------HHTTEEEEEESHCCHHHHHHHHH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhh--------------------------cCCCeEEEEEccccccccccccc
Confidence 4456999999999999999999999999763 26789999999999999999999
Q ss_pred HHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe--
Q 011690 342 RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF-- 418 (479)
Q Consensus 342 ~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~-- 418 (479)
+.+++ ++|.|.|. ++.+++..+|+.||++++| |..+++|.+++|||+||+|||+++.++..|++.++.+|+++
T Consensus 67 ~~~~~~~~i~~~~~-~~~~~l~~~~~~~di~v~~---s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~ 142 (172)
T PF00534_consen 67 EKLNLKENIIFLGY-VPDDELDELYKSSDIFVSP---SRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDP 142 (172)
T ss_dssp HHTTCGTTEEEEES-HSHHHHHHHHHHTSEEEE----BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEEST
T ss_pred cccccccccccccc-ccccccccccccceecccc---ccccccccccccccccccceeeccccCCceeeccccceEEeCC
Confidence 99998 79999997 8888999999999999999 55589999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 011690 419 SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 451 (479)
Q Consensus 419 ~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~ 451 (479)
.++++++++|.++++ +++.++.|++++++
T Consensus 143 ~~~~~l~~~i~~~l~----~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 143 NDIEELADAIEKLLN----DPELRQKLGKNARE 171 (172)
T ss_dssp TSHHHHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHC----CHHHHHHHHHHhcC
Confidence 457999999999999 48999999999886
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-21 Score=204.58 Aligned_cols=270 Identities=13% Similarity=0.082 Sum_probs=178.1
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHh-cCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhH-HHHHHHHhhcCCEEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSV-LRIEKYYGKMANGCLC 177 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~-~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~ad~vi~ 177 (479)
...|+|++|. +..+.+..+++.. .+.|+++.+|....+. . +++.... ..+-+.+ -.+|.+.+
T Consensus 130 ~~~d~iwihD---yhl~llp~~lr~~~~~~~i~~f~HipfP~~---------e---~~~~lp~~~~ll~~~-l~~D~igF 193 (460)
T cd03788 130 RPGDLVWVHD---YHLLLLPQMLRERGPDARIGFFLHIPFPSS---------E---IFRCLPWREELLRGL-LGADLIGF 193 (460)
T ss_pred CCCCEEEEeC---hhhhHHHHHHHhhCCCCeEEEEEeCCCCCh---------H---HHhhCCChHHHHHHH-hcCCEEEE
Confidence 4679999999 4445555555544 3577888888532110 0 1111000 0001122 23888888
Q ss_pred eCHHHHHHHHHh-----------------hCC--eEEEecCC-CCCCCCCCCh--HHHHHHHHhhhhcccCCCCcccccc
Q 011690 178 VTQAMQHELAQN-----------------WGI--KATVLYDQ-PPEFFHPTSL--EEKHELFCRLNKILHQPLGVQDCVS 235 (479)
Q Consensus 178 vS~~~~~~l~~~-----------------~~~--~~~vi~n~-~~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (479)
.+......+.+. .|. ++.++||| |.+.|.+... ..+..+... .
T Consensus 194 ~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~-~-------------- 258 (460)
T cd03788 194 QTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAEL-R-------------- 258 (460)
T ss_pred CCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHH-H--------------
Confidence 886544333332 122 37899999 7777765421 111111110 0
Q ss_pred ccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccC
Q 011690 236 NAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDG 315 (479)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (479)
+..+++ .+|+++||+.+.||++.+++|+..+.++
T Consensus 259 ----------------------~~~~~~-~~il~vgRl~~~Kgi~~ll~A~~~ll~~----------------------- 292 (460)
T cd03788 259 ----------------------ERLGGR-KLIVGVDRLDYSKGIPERLLAFERLLER----------------------- 292 (460)
T ss_pred ----------------------HhcCCC-EEEEEecCccccCCHHHHHHHHHHHHHh-----------------------
Confidence 122344 4899999999999999999999998775
Q ss_pred cccCCCC----EEEEEEec-----CCChHHHHHHHHH----cC-------CCcEEEecCCCCcchHHHHHHcCCEEEEcc
Q 011690 316 KQYLYPR----LLFIITGK-----GPDKESYEEKIRR----LR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLH 375 (479)
Q Consensus 316 ~~~~~p~----~~l~IvG~-----G~~~~~l~~~~~~----~~-------l~~V~f~G~~~~~~~~~~~l~~adi~v~p~ 375 (479)
+|+ ++|+++|. |+..+.+++.+++ ++ ...|.+.+..++.+++..+|+.||++|+|
T Consensus 293 ----~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~p- 367 (460)
T cd03788 293 ----YPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVT- 367 (460)
T ss_pred ----ChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeC-
Confidence 665 67888864 3444445544443 22 23465553338999999999999999999
Q ss_pred cCCCCCCCcHHHHHHHhCCCc----EEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 011690 376 TSSSGLDLPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGT 449 (479)
Q Consensus 376 ~~s~~e~~p~~llEama~G~P----VIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~ 449 (479)
|..||||++++||||||+| ||+|+.+|..+. +.+|+++ .|++++|++|.+++++ ++++++.+++++
T Consensus 368 --S~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ai~~~l~~---~~~e~~~~~~~~ 439 (460)
T cd03788 368 --PLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVADAIHRALTM---PLEERRERHRKL 439 (460)
T ss_pred --ccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHH
Confidence 6679999999999999999 999988887766 4679998 4799999999999996 467777777777
Q ss_pred HHhhhhhchH
Q 011690 450 LEMGLSARWA 459 (479)
Q Consensus 450 ~~~~~~~~w~ 459 (479)
++....++|+
T Consensus 440 ~~~v~~~~~~ 449 (460)
T cd03788 440 REYVRTHDVQ 449 (460)
T ss_pred HHHHHhCCHH
Confidence 7654444443
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4e-20 Score=192.41 Aligned_cols=264 Identities=18% Similarity=0.199 Sum_probs=173.5
Q ss_pred cCCCcEEEEeCCCCc--chHHHHHHHH-HhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEE
Q 011690 99 IASPDVFLVQNPPSV--PTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGC 175 (479)
Q Consensus 99 ~~~~DvI~~~~p~~~--~~~~~~~~~~-~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~v 175 (479)
..+||+||++.|... +...+..+.+ ...++|++....++. . .+ ..++.+.+|.+
T Consensus 98 ~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~-~--------~~--------------~~w~~~~~d~~ 154 (382)
T PLN02605 98 KYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLG-T--------CH--------------PTWFHKGVTRC 154 (382)
T ss_pred hcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCC-C--------cC--------------cccccCCCCEE
Confidence 379999999754321 1111111111 124788877666652 0 00 12334789999
Q ss_pred EEeCHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcc
Q 011690 176 LCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTS 251 (479)
Q Consensus 176 i~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (479)
++.|+.+++.+.+. |++ +.+++++ +.+++.+.. .+..+..
T Consensus 155 ~~~s~~~~~~l~~~-g~~~~ki~v~g~~v~~~f~~~~~--~~~~~r~--------------------------------- 198 (382)
T PLN02605 155 FCPSEEVAKRALKR-GLEPSQIRVYGLPIRPSFARAVR--PKDELRR--------------------------------- 198 (382)
T ss_pred EECCHHHHHHHHHc-CCCHHHEEEECcccCHhhccCCC--CHHHHHH---------------------------------
Confidence 99999999988776 765 7777777 333333322 2223222
Q ss_pred ccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEE-EEEEec
Q 011690 252 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGK 330 (479)
Q Consensus 252 ~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-l~IvG~ 330 (479)
.++++++++ +|+++|+..+.|++..+++++..+... .....++.+ ++++|+
T Consensus 199 ----~~gl~~~~~-~il~~Gg~~g~~~~~~li~~l~~~~~~-----------------------~~~~~~~~~~~vi~G~ 250 (382)
T PLN02605 199 ----ELGMDEDLP-AVLLMGGGEGMGPLEETARALGDSLYD-----------------------KNLGKPIGQVVVICGR 250 (382)
T ss_pred ----HcCCCCCCc-EEEEECCCcccccHHHHHHHHHHhhcc-----------------------ccccCCCceEEEEECC
Confidence 235666666 778888888889999999998754210 000134554 678887
Q ss_pred CC-ChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC------
Q 011690 331 GP-DKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY------ 402 (479)
Q Consensus 331 G~-~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~------ 402 (479)
|+ ..+.+++ ... .+|.|+|+ .++++++|++||++|.+ + | |.+++|||+||+|||+++.
T Consensus 251 ~~~~~~~L~~----~~~~~~v~~~G~---~~~~~~l~~aaDv~V~~---~-g---~~ti~EAma~g~PvI~~~~~pgqe~ 316 (382)
T PLN02605 251 NKKLQSKLES----RDWKIPVKVRGF---VTNMEEWMGACDCIITK---A-G---PGTIAEALIRGLPIILNGYIPGQEE 316 (382)
T ss_pred CHHHHHHHHh----hcccCCeEEEec---cccHHHHHHhCCEEEEC---C-C---cchHHHHHHcCCCEEEecCCCccch
Confidence 74 2333333 222 46999998 56899999999999974 2 2 5699999999999999983
Q ss_pred ccchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHH
Q 011690 403 SCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLIT 471 (479)
Q Consensus 403 ~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 471 (479)
++. +.+.++..|+...+++++++++.+++++ +++.+++|++++++... ...+++.+..+++
T Consensus 317 gn~-~~i~~~g~g~~~~~~~~la~~i~~ll~~---~~~~~~~m~~~~~~~~~----~~a~~~i~~~l~~ 377 (382)
T PLN02605 317 GNV-PYVVDNGFGAFSESPKEIARIVAEWFGD---KSDELEAMSENALKLAR----PEAVFDIVHDLHE 377 (382)
T ss_pred hhH-HHHHhCCceeecCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhcC----CchHHHHHHHHHH
Confidence 334 3445566788889999999999999984 48899999999988542 3344444444443
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-19 Score=189.91 Aligned_cols=263 Identities=11% Similarity=0.105 Sum_probs=179.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhc-CCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHH-HHHHHHhhcCCEEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVL-RIEKYYGKMANGCLC 177 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~-~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~ad~vi~ 177 (479)
..-|+|.+|. +....+..+++... ..++.+-+|-...+ . .+++.+.++ .+-+-+ -.||.|-.
T Consensus 126 ~~~d~vwvhD---Yhl~l~p~~lr~~~~~~~igfFlHipfP~---------~---e~f~~lp~r~~il~gl-l~~dligF 189 (456)
T TIGR02400 126 QPGDIVWVHD---YHLMLLPAMLRELGVQNKIGFFLHIPFPS---------S---EIYRTLPWRRELLEGL-LAYDLVGF 189 (456)
T ss_pred CCCCEEEEec---chhhHHHHHHHhhCCCCeEEEEEeCCCCC---------h---HHHhhCCcHHHHHHHH-hcCCEEEE
Confidence 4468999999 77777777777664 45666777853211 1 111111000 001111 35899999
Q ss_pred eCHHHHHHHHHh----hC------------Ce--EEEecCC-CCCCCCCCChHH--HHHHHHhhhhcccCCCCccccccc
Q 011690 178 VTQAMQHELAQN----WG------------IK--ATVLYDQ-PPEFFHPTSLEE--KHELFCRLNKILHQPLGVQDCVSN 236 (479)
Q Consensus 178 vS~~~~~~l~~~----~~------------~~--~~vi~n~-~~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 236 (479)
.|....+.+.+. ++ .. +.++||| |++.|.+..... +.. ...+.
T Consensus 190 ~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~-~~~lr--------------- 253 (456)
T TIGR02400 190 QTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKR-IAELR--------------- 253 (456)
T ss_pred CCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHH-HHHHH---------------
Confidence 888877666552 11 22 7799999 877776542111 111 00111
Q ss_pred cccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCc
Q 011690 237 AGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 316 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (479)
.. + .++ .+|+++||+++.||++.+++|++.+.++
T Consensus 254 ------------------~~--~-~~~-~vIl~VgRLd~~KGi~~ll~A~~~ll~~------------------------ 287 (456)
T TIGR02400 254 ------------------ES--L-KGR-KLIIGVDRLDYSKGLPERLLAFERFLEE------------------------ 287 (456)
T ss_pred ------------------HH--c-CCC-eEEEEccccccccCHHHHHHHHHHHHHh------------------------
Confidence 01 1 233 4899999999999999999999998765
Q ss_pred ccCCCC----EEEEEEe-----cCCChHHHHHHHHHc--------C---CCcEEEecCCCCcchHHHHHHcCCEEEEccc
Q 011690 317 QYLYPR----LLFIITG-----KGPDKESYEEKIRRL--------R---LKRVAFRTMWLSAEDYPLLLGSADLGVCLHT 376 (479)
Q Consensus 317 ~~~~p~----~~l~IvG-----~G~~~~~l~~~~~~~--------~---l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~ 376 (479)
+|+ +.|+++| +|+..+.+++.++++ + ...|.+.+..++.+++..+|++||++|+|
T Consensus 288 ---~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~-- 362 (456)
T TIGR02400 288 ---HPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVT-- 362 (456)
T ss_pred ---CccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEEC--
Confidence 665 5677774 556666777777665 1 11244544338999999999999999998
Q ss_pred CCCCCCCcHHHHHHHhCCCc----EEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 011690 377 SSSGLDLPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTL 450 (479)
Q Consensus 377 ~s~~e~~p~~llEama~G~P----VIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~ 450 (479)
|..||||++++||||||+| +|+|+.+|..+.+. +|+++ .|++++|++|.++++. ++++++++.+.++
T Consensus 363 -S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~~---~~~er~~r~~~~~ 435 (456)
T TIGR02400 363 -PLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIARALTM---PLEEREERHRAMM 435 (456)
T ss_pred -ccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHH
Confidence 6789999999999999999 99999888877773 79998 5699999999999996 4566666655555
Q ss_pred Hh
Q 011690 451 EM 452 (479)
Q Consensus 451 ~~ 452 (479)
+.
T Consensus 436 ~~ 437 (456)
T TIGR02400 436 DK 437 (456)
T ss_pred HH
Confidence 53
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.5e-19 Score=185.26 Aligned_cols=258 Identities=12% Similarity=0.151 Sum_probs=174.6
Q ss_pred CCCcEEEEeCCCCcchHHHHHHH-HHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWA-SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~-~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+|+++.|. + .+..+. +...++|++....++. .+ .+++.+.+|.+++.
T Consensus 103 ~kPDvVi~~~p~--~--~~~~l~~~~~~~iP~~~v~td~~----------~~--------------~~w~~~~~d~~~v~ 154 (391)
T PRK13608 103 EKPDLILLTFPT--P--VMSVLTEQFNINIPVATVMTDYR----------LH--------------KNWITPYSTRYYVA 154 (391)
T ss_pred hCcCEEEECCcH--H--HHHHHHHhcCCCCCEEEEeCCCC----------cc--------------cccccCCCCEEEEC
Confidence 899999997642 1 222222 2335788755333331 00 01233679999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 255 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (479)
|+.+++.+.+. |++ +.++.++..+.|.... .+.....
T Consensus 155 s~~~~~~l~~~-gi~~~ki~v~GiPv~~~f~~~~--~~~~~~~------------------------------------- 194 (391)
T PRK13608 155 TKETKQDFIDV-GIDPSTVKVTGIPIDNKFETPI--DQKQWLI------------------------------------- 194 (391)
T ss_pred CHHHHHHHHHc-CCCHHHEEEECeecChHhcccc--cHHHHHH-------------------------------------
Confidence 99999998775 765 6666665334443322 1112111
Q ss_pred ccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE-ecCCCh
Q 011690 256 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDK 334 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv-G~G~~~ 334 (479)
.++++++++.+++++|++...|+++.+++++.. ..++++++++ |+++
T Consensus 195 ~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~------------------------------~~~~~~~vvv~G~~~-- 242 (391)
T PRK13608 195 DNNLDPDKQTILMSAGAFGVSKGFDTMITDILA------------------------------KSANAQVVMICGKSK-- 242 (391)
T ss_pred HcCCCCCCCEEEEECCCcccchhHHHHHHHHHh------------------------------cCCCceEEEEcCCCH--
Confidence 234666777788899999989999999998532 1567888655 5442
Q ss_pred HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-Ccc----chhc
Q 011690 335 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSC----IEEL 408 (479)
Q Consensus 335 ~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~----~~e~ 408 (479)
+..++..+..+. ++|.|.|+ .++++++|++||++|+. + .|+++.|||+||+|+|+++ .++ ...+
T Consensus 243 ~l~~~l~~~~~~~~~v~~~G~---~~~~~~~~~~aDl~I~k---~----gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~ 312 (391)
T PRK13608 243 ELKRSLTAKFKSNENVLILGY---TKHMNEWMASSQLMITK---P----GGITISEGLARCIPMIFLNPAPGQELENALY 312 (391)
T ss_pred HHHHHHHHHhccCCCeEEEec---cchHHHHHHhhhEEEeC---C----chHHHHHHHHhCCCEEECCCCCCcchhHHHH
Confidence 222233333333 68999997 57899999999999962 2 3569999999999999996 333 3345
Q ss_pred cccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHH
Q 011690 409 VKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE 472 (479)
Q Consensus 409 i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 472 (479)
+.+...|+..++++++++++.++++ +++.+++|++++++....++|+...+. +..++++
T Consensus 313 ~~~~G~g~~~~~~~~l~~~i~~ll~----~~~~~~~m~~~~~~~~~~~s~~~i~~~-l~~l~~~ 371 (391)
T PRK13608 313 FEEKGFGKIADTPEEAIKIVASLTN----GNEQLTNMISTMEQDKIKYATQTICRD-LLDLIGH 371 (391)
T ss_pred HHhCCcEEEeCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHhcCCCCHHHHHHH-HHHHhhh
Confidence 5677788888999999999999998 589999999999997666666655543 3344443
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-19 Score=167.89 Aligned_cols=119 Identities=34% Similarity=0.463 Sum_probs=104.3
Q ss_pred EEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHHcCC-C
Q 011690 269 SSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-K 347 (479)
Q Consensus 269 ~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l-~ 347 (479)
++|++.+.||++.+++|+..+.++ .|+++++++|.++.....++.+.+++. +
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~---------------------------~~~~~~~i~G~~~~~~~~~~~~~~~~~~~ 161 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKER---------------------------GPDLKLVIAGDGPEREYLEELLAALLLLD 161 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCCChHHHHHHHHhcCCcc
Confidence 788889999999999999999875 789999999999887777776677776 7
Q ss_pred cEEEecCCC-CcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe
Q 011690 348 RVAFRTMWL-SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 418 (479)
Q Consensus 348 ~V~f~G~~~-~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~ 418 (479)
+|.+.|. + +.+++..+++.||++++| +..+++|++++|||+||+|||+|+.++..|++.++.+|+++
T Consensus 162 ~v~~~~~-~~~~~~~~~~~~~~di~l~~---~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 162 RVIFLGG-LDPEELLALLLAAADVFVLP---SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred cEEEeCC-CCcHHHHHHHhhcCCEEEec---ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 9999997 6 556677777779999998 55568999999999999999999999999999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.9e-19 Score=181.98 Aligned_cols=246 Identities=18% Similarity=0.171 Sum_probs=161.4
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||++..++++..++ . +.+..|+|+++..++..+. +.. ... . .+.+.+|.+++.|
T Consensus 84 ~kPdivi~~~~~~~~~~~a-~-~a~~~~ip~i~~~~~~~~~----------~~~---~~~-----~-~~~~~~d~i~~~~ 142 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLE-K-KLRKAGIPTIHYVSPSVWA----------WRQ---GRA-----F-KIAKATDHVLALF 142 (380)
T ss_pred cCCCEEEEeCCCCCCHHHH-H-HHHHCCCCEEEEeCCchhh----------cCc---hHH-----H-HHHHHHhhheeCC
Confidence 7999999987444433322 2 2345689988755432210 000 011 1 2346789999999
Q ss_pred HHHHHHHHHhhCCeEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccccccc
Q 011690 180 QAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 259 (479)
Q Consensus 180 ~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (479)
+..++.+.+. |.++.++.|...+...+.. .+..... .+++
T Consensus 143 ~~~~~~~~~~-g~~~~~~G~p~~~~~~~~~--~~~~~~~-------------------------------------~l~~ 182 (380)
T PRK00025 143 PFEAAFYDKL-GVPVTFVGHPLADAIPLLP--DRAAARA-------------------------------------RLGL 182 (380)
T ss_pred ccCHHHHHhc-CCCeEEECcCHHHhccccc--ChHHHHH-------------------------------------HcCC
Confidence 9988887654 7776665554112111111 1122211 2345
Q ss_pred CCCCCeEEEEEec-CCCC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEec-CCChHH
Q 011690 260 KPNRPALVVSSTS-WTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-GPDKES 336 (479)
Q Consensus 260 ~~~~~~~i~~~g~-~~~~-K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~-G~~~~~ 336 (479)
+++++.++++.|+ .... +.++.+++|+..+.++ +|+++++++|. ++..+.
T Consensus 183 ~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~---------------------------~~~~~~ii~~~~~~~~~~ 235 (380)
T PRK00025 183 DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQR---------------------------YPDLRFVLPLVNPKRREQ 235 (380)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHh---------------------------CCCeEEEEecCChhhHHH
Confidence 5566655566553 3332 4478899999988765 78899999986 666777
Q ss_pred HHHHHHHc-CCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe---------------
Q 011690 337 YEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV--------------- 400 (479)
Q Consensus 337 l~~~~~~~-~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas--------------- 400 (479)
+++.++++ ++. +.+. .+++..+|+.||++|++ | |...+|||+||+|+|++
T Consensus 236 ~~~~~~~~~~~~-v~~~-----~~~~~~~~~~aDl~v~~---s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~ 301 (380)
T PRK00025 236 IEEALAEYAGLE-VTLL-----DGQKREAMAAADAALAA---S-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLV 301 (380)
T ss_pred HHHHHhhcCCCC-eEEE-----cccHHHHHHhCCEEEEC---c-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHH
Confidence 88877776 554 4442 35899999999999987 3 45778999999999987
Q ss_pred --cCccchhccccCc--cEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 011690 401 --SYSCIEELVKVDK--NGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 451 (479)
Q Consensus 401 --~~~~~~e~i~~~~--~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~ 451 (479)
+.+++++++.++. .+++. .+++++++.+.++++ |++.+++|++++.+
T Consensus 302 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~ 354 (380)
T PRK00025 302 KVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLA----DGARRQALLEGFTE 354 (380)
T ss_pred cCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhc----CHHHHHHHHHHHHH
Confidence 4455567776553 34555 458999999999999 68999999888754
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.9e-19 Score=180.73 Aligned_cols=255 Identities=16% Similarity=0.114 Sum_probs=168.4
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+|+. ....+++.++++..++|++...++.. + .+...++..... ...+.+.||.+++.|
T Consensus 85 ~~pDiv~~~gd--~~~~la~a~aa~~~~ipv~h~~~g~~-s-----~~~~~~~~~~~~-------r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 85 EKPDIVLVQGD--TTTTLAGALAAFYLQIPVGHVEAGLR-T-----GDRYSPMPEEIN-------RQLTGHIADLHFAPT 149 (365)
T ss_pred cCCCEEEEeCC--chHHHHHHHHHHHhCCCEEEEeCCCC-c-----CCCCCCCccHHH-------HHHHHHHHHhccCCC
Confidence 88999999973 34455566778888999764322211 0 000101101010 112345689999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 255 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (479)
+..++.+.+. |.+ +.+++|+ ....+.+........+..+
T Consensus 150 ~~~~~~l~~~-G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~------------------------------------ 192 (365)
T TIGR00236 150 EQAKDNLLRE-NVKADSIFVTGNTVIDALLTNVEIAYSSPVLSE------------------------------------ 192 (365)
T ss_pred HHHHHHHHHc-CCCcccEEEeCChHHHHHHHHHhhccchhHHHh------------------------------------
Confidence 9999999875 764 7889998 3222211110001111111
Q ss_pred ccccCCCCCeEEEEEecC-CCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh
Q 011690 256 DVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 334 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~-~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~ 334 (479)
++ .+++.++++.+|. ...|+++.+++|+..+.++ +|+++++++|.+..
T Consensus 193 -~~--~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~~vi~~~~~~- 241 (365)
T TIGR00236 193 -FG--EDKRYILLTLHRRENVGEPLENIFKAIREIVEE---------------------------FEDVQIVYPVHLNP- 241 (365)
T ss_pred -cC--CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHH---------------------------CCCCEEEEECCCCh-
Confidence 11 2234445544454 2458999999999998765 78899988864422
Q ss_pred HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe-cCccchhccccC
Q 011690 335 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVD 412 (479)
Q Consensus 335 ~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas-~~~~~~e~i~~~ 412 (479)
+..++..+.++. ++|.|.|. ++..++..+++.||+++.+ | |..++|||+||+|||++ +.++.+|+++.+
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~l~~ad~vv~~---S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g 312 (365)
T TIGR00236 242 VVREPLHKHLGDSKRVHLIEP-LEYLDFLNLAANSHLILTD---S-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG 312 (365)
T ss_pred HHHHHHHHHhCCCCCEEEECC-CChHHHHHHHHhCCEEEEC---C-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC
Confidence 122223344555 68999998 8899999999999999876 3 23689999999999996 678888988766
Q ss_pred ccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 011690 413 KNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 451 (479)
Q Consensus 413 ~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~ 451 (479)
.++++ .+++++++++.++++ +++.+++++++...
T Consensus 313 -~~~lv~~d~~~i~~ai~~ll~----~~~~~~~~~~~~~~ 347 (365)
T TIGR00236 313 -TNKLVGTDKENITKAAKRLLT----DPDEYKKMSNASNP 347 (365)
T ss_pred -ceEEeCCCHHHHHHHHHHHHh----ChHHHHHhhhcCCC
Confidence 45555 689999999999998 57888888776643
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-18 Score=169.58 Aligned_cols=292 Identities=18% Similarity=0.249 Sum_probs=202.9
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchh--hhhh-hhcC-CCch--hHHHHHHHhHHHHHHHHhhcCC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGY--TLLS-LSLG-RRSH--FVSIYRCFSVLRIEKYYGKMAN 173 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~--~~~~-~~~~-~~~~--~~~~~~~~~~~~~e~~~~~~ad 173 (479)
..||+.+-.- ....+ ....+.+.++|++.-.|-.-- +.+. +... ..+. ..++..|-.|.++=+.....||
T Consensus 149 ~~Pdi~IDtM-GY~fs---~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~~~G~~ad 224 (465)
T KOG1387|consen 149 FPPDIFIDTM-GYPFS---YPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQSAGSKAD 224 (465)
T ss_pred CCchheEecC-CCcch---hHHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHHhccccce
Confidence 6899875543 11112 223455789998887773211 1111 1100 0111 1122222223444556677899
Q ss_pred EEEEeCHHHHHHHHHhhCCe-EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcc
Q 011690 174 GCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTS 251 (479)
Q Consensus 174 ~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (479)
.+++.|.....++.+.|+.. +.++|.. +.+ .-+. ..
T Consensus 225 ~vm~NssWT~nHI~qiW~~~~~~iVyPPC~~e--------~lks---~~------------------------------- 262 (465)
T KOG1387|consen 225 IVMTNSSWTNNHIKQIWQSNTCSIVYPPCSTE--------DLKS---KF------------------------------- 262 (465)
T ss_pred EEEecchhhHHHHHHHhhccceeEEcCCCCHH--------HHHH---Hh-------------------------------
Confidence 99999999999999999865 6676643 322 1111 00
Q ss_pred ccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC
Q 011690 252 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 331 (479)
Q Consensus 252 ~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G 331 (479)
+-..++...++++|.+.|+|++. +++.++.+..+ |.+ = ...++++|+|+|.-
T Consensus 263 ------~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~------~pl----------~-----a~~~~iKL~ivGSc 314 (465)
T KOG1387|consen 263 ------GTEGERENQLLSLAQFRPEKNHK-ILQLFALYLKN------EPL----------E-----ASVSPIKLIIVGSC 314 (465)
T ss_pred ------cccCCcceEEEEEeecCcccccH-HHHHHHHHHhc------Cch----------h-----hccCCceEEEEecc
Confidence 01123345899999999999999 66766665543 000 0 12467999999953
Q ss_pred ---CCh---HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc
Q 011690 332 ---PDK---ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 404 (479)
Q Consensus 332 ---~~~---~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~ 404 (479)
.+. ..++..+.++.+ ++|.|.-. +|.+++..+|+.|.++|-. -..|-||..++|+||+|+-.|+.+.||
T Consensus 315 RneeD~ervk~Lkd~a~~L~i~~~v~F~~N-~Py~~lv~lL~~a~iGvh~---MwNEHFGIsVVEyMAAGlIpi~h~SgG 390 (465)
T KOG1387|consen 315 RNEEDEERVKSLKDLAEELKIPKHVQFEKN-VPYEKLVELLGKATIGVHT---MWNEHFGISVVEYMAAGLIPIVHNSGG 390 (465)
T ss_pred CChhhHHHHHHHHHHHHhcCCccceEEEec-CCHHHHHHHhccceeehhh---hhhhhcchhHHHHHhcCceEEEeCCCC
Confidence 222 346678888999 68999998 9999999999999999953 366779999999999999988888777
Q ss_pred c-hhcccc---CccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh---hhhhchHHHHHHHHHHHHHH
Q 011690 405 I-EELVKV---DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM---GLSARWATEWEEHAKPLITE 472 (479)
Q Consensus 405 ~-~e~i~~---~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~w~~~~~~~~~~~~~~ 472 (479)
. -+++.+ ..+||++.+.++.|+++.++.+. +.+++..+|++|++. +++..+++.|+...++++++
T Consensus 391 P~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~---~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 391 PLLDIVTPWDGETTGFLAPTDEEYAEAILKIVKL---NYDERNMMRRNARKSLARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred CceeeeeccCCccceeecCChHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhcc
Confidence 5 466655 35699999999999999999997 788899999998874 36777999999999998876
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.82 E-value=7e-19 Score=180.33 Aligned_cols=247 Identities=16% Similarity=0.081 Sum_probs=169.4
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+|+. ....+++.++++..++|++...|+.. + +..... ... . ...+.+.+|.+++.|
T Consensus 87 ~~pDvV~~~g~--~~~~~~~~~aa~~~~iPvv~~~~g~~-s-----~~~~~~-~~~---~-----r~~~~~~ad~~~~~s 149 (363)
T cd03786 87 EKPDLVLVLGD--TNETLAAALAAFKLGIPVAHVEAGLR-S-----FDRGMP-DEE---N-----RHAIDKLSDLHFAPT 149 (363)
T ss_pred hCCCEEEEeCC--chHHHHHHHHHHHcCCCEEEEecccc-c-----CCCCCC-chH---H-----HHHHHHHhhhccCCC
Confidence 69999999973 23445556677778999876555422 0 000111 111 1 223456789999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCC--CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
+..++.+.+. |.+ +.+++|+ +...+.+.. ..... .+
T Consensus 150 ~~~~~~l~~~-G~~~~kI~vign~v~d~~~~~~~~--~~~~~------------------------------------~~ 190 (363)
T cd03786 150 EEARRNLLQE-GEPPERIFVVGNTMIDALLRLLEL--AKKEL------------------------------------IL 190 (363)
T ss_pred HHHHHHHHHc-CCCcccEEEECchHHHHHHHHHHh--hccch------------------------------------hh
Confidence 9999998765 665 7788887 211111110 00000 00
Q ss_pred cccccCCCCCeEEEEEecCCC---CCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC
Q 011690 255 IDVFLKPNRPALVVSSTSWTP---DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 331 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~---~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G 331 (479)
...+++ +++.++++.|+... .|+++.+++|++.+.+ . ++.+++.|.+
T Consensus 191 ~~~~~~-~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~----------------------------~-~~~vi~~~~~ 240 (363)
T cd03786 191 ELLGLL-PKKYILVTLHRVENVDDGEQLEEILEALAELAE----------------------------E-DVPVVFPNHP 240 (363)
T ss_pred hhcccC-CCCEEEEEeCCccccCChHHHHHHHHHHHHHHh----------------------------c-CCEEEEECCC
Confidence 112333 45567888888774 7999999999998753 1 5788888888
Q ss_pred CChHHHHHHHHHcCC--CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-Cccchhc
Q 011690 332 PDKESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEEL 408 (479)
Q Consensus 332 ~~~~~l~~~~~~~~l--~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~~~e~ 408 (479)
+.++.+++.++++++ ++|.|.|. ...+++..+|++||++|.+ |.+ .+.|||++|+|||+++ .++..+.
T Consensus 241 ~~~~~l~~~~~~~~~~~~~v~~~~~-~~~~~~~~l~~~ad~~v~~---Sgg-----i~~Ea~~~g~PvI~~~~~~~~~~~ 311 (363)
T cd03786 241 RTRPRIREAGLEFLGHHPNVLLISP-LGYLYFLLLLKNADLVLTD---SGG-----IQEEASFLGVPVLNLRDRTERPET 311 (363)
T ss_pred ChHHHHHHHHHhhccCCCCEEEECC-cCHHHHHHHHHcCcEEEEc---Ccc-----HHhhhhhcCCCEEeeCCCCccchh
Confidence 888999999888875 68999997 7889999999999999987 332 5799999999999997 4546677
Q ss_pred cccCccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 011690 409 VKVDKNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLR 446 (479)
Q Consensus 409 i~~~~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~ 446 (479)
++++. +..+ ++++++++++.+++++ +..+..|+
T Consensus 312 ~~~g~-~~~~~~~~~~i~~~i~~ll~~----~~~~~~~~ 345 (363)
T cd03786 312 VESGT-NVLVGTDPEAILAAIEKLLSD----EFAYSLMS 345 (363)
T ss_pred hheee-EEecCCCHHHHHHHHHHHhcC----chhhhcCC
Confidence 76553 4444 4699999999999984 56555554
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-17 Score=184.69 Aligned_cols=281 Identities=10% Similarity=0.098 Sum_probs=186.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHh-cCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhH--HHHHHHHhhcCCEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSV--LRIEKYYGKMANGCL 176 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~-~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~e~~~~~~ad~vi 176 (479)
..-|+|-+|. +..+.+..+++.. .+.++.+-+|....+. -+++++-. ..++.+ -.||.|-
T Consensus 146 ~~~d~vWvhD---YhL~llp~~lR~~~~~~~igfFlHiPFPs~------------e~fr~lp~r~~il~gl--l~aDlig 208 (797)
T PLN03063 146 EEGDVVWCHD---YHLMFLPQYLKEYNNKMKVGWFLHTPFPSS------------EIYKTLPSRSELLRAV--LTADLIG 208 (797)
T ss_pred CCCCEEEEec---chhhhHHHHHHHhCCCCcEEEEecCCCCCH------------HHHhhCCCHHHHHHHH--hcCCEEE
Confidence 3457999999 7777777777765 4567777777642111 11111100 001111 2478888
Q ss_pred EeCHHHHHHHHHhh----------------CC--eEEEecCC-CCCCCCCCCh--HHHHHHHHhhhhcccCCCCcccccc
Q 011690 177 CVTQAMQHELAQNW----------------GI--KATVLYDQ-PPEFFHPTSL--EEKHELFCRLNKILHQPLGVQDCVS 235 (479)
Q Consensus 177 ~vS~~~~~~l~~~~----------------~~--~~~vi~n~-~~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (479)
+.|......+.+.. |. ++.++||| +++.|.+... +.+.. ...+..
T Consensus 209 F~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~-~~~lr~------------- 274 (797)
T PLN03063 209 FHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQH-MKELKR------------- 274 (797)
T ss_pred eCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHH-HHHHHH-------------
Confidence 87777666655411 11 27799999 7677754321 11111 111110
Q ss_pred ccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccC
Q 011690 236 NAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDG 315 (479)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (479)
...+++ +|+++||+.+.||++.+++|+..+.++
T Consensus 275 -----------------------~~~~~~-lIl~VgRLd~~KGi~~lL~Afe~lL~~----------------------- 307 (797)
T PLN03063 275 -----------------------FFAGRK-VILGVDRLDMIKGIPQKYLAFEKFLEE----------------------- 307 (797)
T ss_pred -----------------------hcCCCe-EEEEecccccccCHHHHHHHHHHHHHh-----------------------
Confidence 012343 899999999999999999999998775
Q ss_pred cccCCCCE----EEEEE-----ecCCChHHHHHHHHHcC--CC---------cEEEecCCCCcchHHHHHHcCCEEEEcc
Q 011690 316 KQYLYPRL----LFIIT-----GKGPDKESYEEKIRRLR--LK---------RVAFRTMWLSAEDYPLLLGSADLGVCLH 375 (479)
Q Consensus 316 ~~~~~p~~----~l~Iv-----G~G~~~~~l~~~~~~~~--l~---------~V~f~G~~~~~~~~~~~l~~adi~v~p~ 375 (479)
+|++ .|+.+ |+|+..+.+++.++++. ++ -|.+.+..++.+++..+|+.||++|+|
T Consensus 308 ----~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvt- 382 (797)
T PLN03063 308 ----NPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVT- 382 (797)
T ss_pred ----CccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeC-
Confidence 7765 34433 34566667777777663 21 244454348999999999999999999
Q ss_pred cCCCCCCCcHHHHHHHhCCCc----EEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 011690 376 TSSSGLDLPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGT 449 (479)
Q Consensus 376 ~~s~~e~~p~~llEama~G~P----VIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~ 449 (479)
|..||++++++||||||+| +|+|..+|..+.+ +.+|+++ .|++++|++|.++++. ++++++...+..
T Consensus 383 --SlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~ 455 (797)
T PLN03063 383 --SLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALNM---SDEERETRHRHN 455 (797)
T ss_pred --ccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHH
Confidence 7789999999999999999 9999998888876 5579999 5699999999999995 466666655555
Q ss_pred HHhhhhhchHHHHHHHHHHHHH
Q 011690 450 LEMGLSARWATEWEEHAKPLIT 471 (479)
Q Consensus 450 ~~~~~~~~w~~~~~~~~~~~~~ 471 (479)
++....++|. .|.+....-++
T Consensus 456 ~~~v~~~~~~-~Wa~~fl~~l~ 476 (797)
T PLN03063 456 FQYVKTHSAQ-KWADDFMSELN 476 (797)
T ss_pred HHhhhhCCHH-HHHHHHHHHHH
Confidence 5544455554 44444333333
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-16 Score=166.57 Aligned_cols=314 Identities=16% Similarity=0.112 Sum_probs=208.1
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHH----hcCCcEEEEecCchhhhhhh-h-cCC-CchhHHHH----HHHhHHHHHHHH
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASS----LRRSAFIVDWHNFGYTLLSL-S-LGR-RSHFVSIY----RCFSVLRIEKYY 168 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~----~~~~~~ii~~h~~~~~~~~~-~-~~~-~~~~~~~~----~~~~~~~~e~~~ 168 (479)
..|||||+|+ +.+.++..+.+. ...+|.|+|+|+..|.-..- . ... .-+...+. .++......|.-
T Consensus 129 ~~pDIvH~hD---Wqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~g 205 (487)
T COG0297 129 WLPDIVHAHD---WQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGG 205 (487)
T ss_pred CCCCEEEeec---HHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhh
Confidence 4799999999 777777766666 45799999999876421100 0 000 00000000 000001124555
Q ss_pred hhcCCEEEEeCHHHHHHHHH-hhC-----------CeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCcccccc
Q 011690 169 GKMANGCLCVTQAMQHELAQ-NWG-----------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS 235 (479)
Q Consensus 169 ~~~ad~vi~vS~~~~~~l~~-~~~-----------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (479)
...||.|.+||+.-.+++.. .+| .+..-|.|| |.+.+.|........
T Consensus 206 i~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~-------------------- 265 (487)
T COG0297 206 LYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAA-------------------- 265 (487)
T ss_pred heeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhc--------------------
Confidence 56799999999999988872 222 226778888 777676653211100
Q ss_pred ccccCCcccccchhccccccccccCC--CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhc
Q 011690 236 NAGMEGQKADETIFTSLAGIDVFLKP--NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEIS 313 (479)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 313 (479)
++..+--.++...... ....+++.. +.| ++.++||++.+||++.+++|+..+.+.
T Consensus 266 ~y~~~~~~~k~~nk~~-L~~~~gL~~~~~~p-l~~~vsRl~~QKG~dl~~~~i~~~l~~--------------------- 322 (487)
T COG0297 266 NYSAEVLPAKAENKVA-LQERLGLDVDLPGP-LFGFVSRLTAQKGLDLLLEAIDELLEQ--------------------- 322 (487)
T ss_pred cCCccchhhhHHHHHH-HHHHhCCCCCCCCc-EEEEeeccccccchhHHHHHHHHHHHh---------------------
Confidence 0000000000000000 112334542 345 899999999999999999999998864
Q ss_pred cCcccCCCCEEEEEEecCC--ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHH
Q 011690 314 DGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF 391 (479)
Q Consensus 314 ~~~~~~~p~~~l~IvG~G~--~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEam 391 (479)
.++|+|.|.|. ..+.+...++++. .++.+.- |.+..-...+++.||++++| |..|++|.+-++||
T Consensus 323 --------~~~~vilG~gd~~le~~~~~la~~~~-~~~~~~i-~~~~~la~~i~agaD~~lmP---SrfEPcGL~ql~am 389 (487)
T COG0297 323 --------GWQLVLLGTGDPELEEALRALASRHP-GRVLVVI-GYDEPLAHLIYAGADVILMP---SRFEPCGLTQLYAM 389 (487)
T ss_pred --------CceEEEEecCcHHHHHHHHHHHHhcC-ceEEEEe-eecHHHHHHHHhcCCEEEeC---CcCcCCcHHHHHHH
Confidence 39999999992 2233444444432 2444444 47888899999999999999 89999999999999
Q ss_pred hCCCcEEEecCccchhcccc--------CccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHH
Q 011690 392 GCGLPVCAVSYSCIEELVKV--------DKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE 461 (479)
Q Consensus 392 a~G~PVIas~~~~~~e~i~~--------~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 461 (479)
..|++.|+..+||..+.|.+ ..+|+++ .++++++.+|.+.+.-+..++...+.++.++-. ..++|+..
T Consensus 390 ryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~s 467 (487)
T COG0297 390 RYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLS 467 (487)
T ss_pred HcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhH
Confidence 99999999999999998875 5789999 668999999998887655455557777777665 47899888
Q ss_pred HHHHHHHHHHHHHh
Q 011690 462 WEEHAKPLITEVIS 475 (479)
Q Consensus 462 ~~~~~~~~~~~~~~ 475 (479)
-++ -.++++.+++
T Consensus 468 a~~-y~~lY~~~~~ 480 (487)
T COG0297 468 AKE-YVELYKPLLS 480 (487)
T ss_pred HHH-HHHHHHHHhc
Confidence 765 4556666554
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.1e-17 Score=171.46 Aligned_cols=378 Identities=17% Similarity=0.118 Sum_probs=217.3
Q ss_pred CcceEEEEEecCCCCChhHHHH-HHHHHh---------hCCCcEEEEecCCCCC------c--ccccC-CCCeEEEEeec
Q 011690 3 RRGRACVVVLGDLGRSPRMQYQ-ALSLAR---------QMSLEVDVVAYGGSKP------H--AAILE-HPSIHIHTMTQ 63 (479)
Q Consensus 3 ~~~~~~i~~~~~~g~~~r~~~~-a~~La~---------~~G~eV~Vv~~~~~~~------~--~~~~~-~~gi~i~~~~~ 63 (479)
...++.+.....+|++.|-... +..+.. . |++|.+++...... . ..... ..++.++...
T Consensus 34 ~~~~~~~~~~~~~gg~er~~v~~~~~l~s~~~~lg~~d~-G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~- 111 (495)
T KOG0853|consen 34 FEHVTFIHPDLGIGGAERLVVDAAVHLLSGQDVLGLPDT-GGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDW- 111 (495)
T ss_pred chhheeeccccccCchHHHhHHHHHHHHhcccccCCCCC-CceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEee-
Confidence 4466777777788887777665 555555 5 99999998664433 0 00111 1345555544
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcC----CcEEEEecCchh
Q 011690 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRR----SAFIVDWHNFGY 139 (479)
Q Consensus 64 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~----~~~ii~~h~~~~ 139 (479)
. |.... ..... ....+.+..+..-+..+.....+.|.++... . ....++...+.+ .+++.+.|.. .
T Consensus 112 -l-P~~~~-~~~~~-~~~~~~~~il~~~~~~~~k~~~~~d~~i~d~---~--~~~~~l~~~~~~p~~~~~i~~~~h~~-~ 181 (495)
T KOG0853|consen 112 -L-PRAMG-QFLEQ-VAGCAYLRILRIPFGILFKWAEKVDPIIEDF---V--SACVPLLKQLSGPDVIIKIYFYCHFP-D 181 (495)
T ss_pred -c-Ccccc-hhhhh-hhccceeEEEEeccchhhhhhhhhceeecch---H--HHHHHHHHHhcCCcccceeEEeccch-H
Confidence 1 11110 00000 0000000000000001111124667776665 2 222333444443 3334455543 3
Q ss_pred hhhhhhcCCCchhH-HHHHHHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhh---CC-eEEEecCC-CCCCCCCCChHHH
Q 011690 140 TLLSLSLGRRSHFV-SIYRCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNW---GI-KATVLYDQ-PPEFFHPTSLEEK 213 (479)
Q Consensus 140 ~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~---~~-~~~vi~n~-~~~~f~~~~~~~~ 213 (479)
.++..+.+-...+. ....+. |......++.+++.|......+...+ +. ++.+.|-. +.+.+.+...+.+
T Consensus 182 ~lla~r~g~~~~l~~~~l~~~-----e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~ 256 (495)
T KOG0853|consen 182 SLLAKRLGVLKVLYRHALDKI-----EEETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESH 256 (495)
T ss_pred HHhccccCccceeehhhhhhh-----hhhhhhccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccccccccc
Confidence 44443322111111 111122 44444568999998888877765542 11 15555554 3333433211111
Q ss_pred HHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHH
Q 011690 214 HELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 293 (479)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~ 293 (479)
..|+.-.|-..+....+ .+.....++.|.||+..+++|+..+..+.
T Consensus 257 ---------------------------------~~~~~~~r~~~~v~~~d-~~~~siN~~~pgkd~~l~l~a~~~~~~~i 302 (495)
T KOG0853|consen 257 ---------------------------------LELRLPVRLYRGVSGID-RFFPSINRFEPGKDQDLALPAFTLLHDSI 302 (495)
T ss_pred ---------------------------------hhcccccceeeeecccc-eEeeeeeecCCCCCceeehhhHHhhhccc
Confidence 11111112222222222 47788899999999999999999988651
Q ss_pred hhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEec-CC---------ChHHHHHHHHHcCC--CcEEEecCCCCcchH
Q 011690 294 AAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-GP---------DKESYEEKIRRLRL--KRVAFRTMWLSAEDY 361 (479)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~-G~---------~~~~l~~~~~~~~l--~~V~f~G~~~~~~~~ 361 (479)
.. ...++.++.++|+ |. +.+++.+.++++++ +.|.|+.. -++.+.
T Consensus 303 ~~----------------------~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s-~~~~~~ 359 (495)
T KOG0853|consen 303 PE----------------------PSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPS-TTRVAK 359 (495)
T ss_pred CC----------------------CCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecC-CchHHH
Confidence 10 2356788999883 21 22467778999988 56888776 344444
Q ss_pred HHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEeCC-HH---HHHHHHHHHHhcCCC
Q 011690 362 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS-SS---ELADQLLMLFKGFPD 437 (479)
Q Consensus 362 ~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~~~-~~---~la~~l~~l~~~~~~ 437 (479)
+...||.-+..++.. +|.||.+++|||+||+||+||+.||..|++.++.+|++++. .+ .+|+++.++..
T Consensus 360 --yrl~adt~~v~~qPa-~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~---- 432 (495)
T KOG0853|consen 360 --YRLAADTKGVLYQPA-NEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDPGQEAVAELADALLKLRR---- 432 (495)
T ss_pred --HHHHHhcceEEecCC-CCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCCchHHHHHHHHHHHHHhc----
Confidence 555555544434444 49999999999999999999999999999999999999944 44 59999999999
Q ss_pred CHHHHHHHHHHHHHhhh-hhchHHH
Q 011690 438 DSDVLKKLRNGTLEMGL-SARWATE 461 (479)
Q Consensus 438 ~~~~~~~~~~~~~~~~~-~~~w~~~ 461 (479)
|++.+.+|++++++.-. .++|...
T Consensus 433 ~p~l~~~~~~~G~~rV~e~fs~~~~ 457 (495)
T KOG0853|consen 433 DPELWARMGKNGLKRVKEMFSWQHY 457 (495)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 69999999999988653 4788333
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.6e-16 Score=150.61 Aligned_cols=286 Identities=24% Similarity=0.316 Sum_probs=191.3
Q ss_pred CcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHH
Q 011690 102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQA 181 (479)
Q Consensus 102 ~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~ 181 (479)
+|+++.+..................+.+.+..+|............ .......... ...........++.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRL--LLLLGLLRLL-LKRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccc--hhhHHHHHHH-HHHHHHhccccccEEEECCHH
Confidence 5898887743333212233334455677888888765221110000 0000000000 000011111147888888888
Q ss_pred HHHHHHHhhCC-eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccccccc
Q 011690 182 MQHELAQNWGI-KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 259 (479)
Q Consensus 182 ~~~~l~~~~~~-~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (479)
....+...+.. +..+++++ +.+.+.+.. +..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~ 193 (381)
T COG0438 161 LKELLEALGVPNKIVVIPNGIDTEKFAPAR-----------------------------------------------IGL 193 (381)
T ss_pred HHHHHHHhCCCCCceEecCCcCHHHcCccc-----------------------------------------------cCC
Confidence 76655555333 37777887 444443310 011
Q ss_pred CCCC-CeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC-hHHH
Q 011690 260 KPNR-PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESY 337 (479)
Q Consensus 260 ~~~~-~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~-~~~l 337 (479)
.++. ...++++|++.+.||++.+++++..+.++ .+++.+.++|.|+. .+.+
T Consensus 194 ~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~~~~~g~~~~~~~~~ 246 (381)
T COG0438 194 LPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKR---------------------------GPDIKLVIVGDGPERREEL 246 (381)
T ss_pred CcccCceEEEEeeccChhcCHHHHHHHHHHhhhh---------------------------cCCeEEEEEcCCCccHHHH
Confidence 1222 25899999999999999999999999875 55699999999987 3677
Q ss_pred HHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEE
Q 011690 338 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGL 416 (479)
Q Consensus 338 ~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~ 416 (479)
.+.+++.+. ++|.|.|. ++.+++..+++.||++++| +..|++|..++|||++|+|||+++.++..|++.++.+|+
T Consensus 247 ~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~~~~~v~p---s~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~ 322 (381)
T COG0438 247 EKLAKKLGLEDNVKFLGY-VPDEELAELLASADVFVLP---SLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGL 322 (381)
T ss_pred HHHHHHhCCCCcEEEecc-cCHHHHHHHHHhCCEEEec---cccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceE
Confidence 778888877 78999996 8888999999999999999 444889999999999999999999999999998887788
Q ss_pred EeC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHHHHHHHHHHH
Q 011690 417 LFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITEV 473 (479)
Q Consensus 417 l~~--~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~ 473 (479)
++. +.+++++++..++++ .+.++.+.+.+.+.. ..++|+...+. ..+++..+
T Consensus 323 ~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 377 (381)
T COG0438 323 LVPPGDVEELADALEQLLED----PELREELGEAARERVEEEFSWERIAEQ-LLELYEEL 377 (381)
T ss_pred ecCCCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHhcCHHHHHHH-HHHHHHHH
Confidence 663 479999999999994 566666665333322 46788777643 34444433
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-15 Score=171.38 Aligned_cols=271 Identities=14% Similarity=0.073 Sum_probs=172.9
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhc-CCcEEEEecCchhh--hhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYT--LLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCL 176 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~-~~~~ii~~h~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi 176 (479)
..-|+|-+|. +..+.+..+++... +.++-+-+|-...+ ++.. +. ....+. +- .-.+|.+-
T Consensus 132 ~~~d~vwvhD---Yhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~-lp---~~~~ll--------~~--ll~~Dlig 194 (726)
T PRK14501 132 RPGDVVWVHD---YQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRL-LP---WREEIL--------EG--LLGADLIG 194 (726)
T ss_pred CCCCEEEEeC---chhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhh-CC---ChHHHH--------HH--HhcCCeEE
Confidence 4458999999 77777777776653 45666667754211 1110 00 000111 11 12477777
Q ss_pred EeCHHHHHHHHHh----h------------CC--eEEEecCC-CCCCCCCCChHHH-HHHHHhhhhcccCCCCccccccc
Q 011690 177 CVTQAMQHELAQN----W------------GI--KATVLYDQ-PPEFFHPTSLEEK-HELFCRLNKILHQPLGVQDCVSN 236 (479)
Q Consensus 177 ~vS~~~~~~l~~~----~------------~~--~~~vi~n~-~~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (479)
..+....+.+.+. . |. ++.++||| |++.|.+...... .+...++..
T Consensus 195 f~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~-------------- 260 (726)
T PRK14501 195 FHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQ-------------- 260 (726)
T ss_pred eCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHH--------------
Confidence 7777655444331 1 21 27889999 8777765431111 010111110
Q ss_pred cccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCc
Q 011690 237 AGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 316 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (479)
..+++ .+|+++||+.+.||+..+++|+..+.++
T Consensus 261 ----------------------~~~~~-~~il~VgRl~~~Kgi~~~l~A~~~ll~~------------------------ 293 (726)
T PRK14501 261 ----------------------DLRGR-KIILSIDRLDYTKGIPRRLLAFERFLEK------------------------ 293 (726)
T ss_pred ----------------------HcCCC-EEEEEecCcccccCHHHHHHHHHHHHHh------------------------
Confidence 11233 4899999999999999999999998765
Q ss_pred ccCCCC----EEEEEEe----cC-CChHHHHHHHHHc----C-------CC-cEEEecCCCCcchHHHHHHcCCEEEEcc
Q 011690 317 QYLYPR----LLFIITG----KG-PDKESYEEKIRRL----R-------LK-RVAFRTMWLSAEDYPLLLGSADLGVCLH 375 (479)
Q Consensus 317 ~~~~p~----~~l~IvG----~G-~~~~~l~~~~~~~----~-------l~-~V~f~G~~~~~~~~~~~l~~adi~v~p~ 375 (479)
+|+ ++|+++| +| +..+.+++.+.++ + .. -+.|.|. ++.++++.+|++||++++|
T Consensus 294 ---~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~-~~~~~l~~ly~~aDv~v~~- 368 (726)
T PRK14501 294 ---NPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRS-LPFEELVALYRAADVALVT- 368 (726)
T ss_pred ---CccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCC-CCHHHHHHHHHhccEEEec-
Confidence 665 6898887 33 3344555555443 1 11 2456676 9999999999999999998
Q ss_pred cCCCCCCCcHHHHHHHhC-----CCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 011690 376 TSSSGLDLPMKVVDMFGC-----GLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNG 448 (479)
Q Consensus 376 ~~s~~e~~p~~llEama~-----G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~ 448 (479)
|..||||++++||||| |+||++...|+.+++. .|+++ .|++++|++|.++++. +.+++....+.
T Consensus 369 --S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~~---~~~e~~~r~~~ 439 (726)
T PRK14501 369 --PLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAAIKRALEM---PEEEQRERMQA 439 (726)
T ss_pred --ccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHH
Confidence 6778999999999999 5567777788888876 48888 5699999999999985 33343333334
Q ss_pred HHHhhhhhchHHHH
Q 011690 449 TLEMGLSARWATEW 462 (479)
Q Consensus 449 ~~~~~~~~~w~~~~ 462 (479)
+++....++|..-.
T Consensus 440 ~~~~v~~~~~~~w~ 453 (726)
T PRK14501 440 MQERLRRYDVHKWA 453 (726)
T ss_pred HHHHHHhCCHHHHH
Confidence 44433344554333
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-17 Score=143.80 Aligned_cols=130 Identities=28% Similarity=0.438 Sum_probs=96.6
Q ss_pred eEEEEEecCCCCCCHHHHHH-HHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHH
Q 011690 265 ALVVSSTSWTPDEDFGILLE-AALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 343 (479)
Q Consensus 265 ~~i~~~g~~~~~K~~~~lie-A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~ 343 (479)
.++++.|++.+.|+++.+++ |+..+.++ .|+++|+|+|.++. .+++.
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~---------------------------~p~~~l~i~G~~~~--~l~~~--- 50 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEK---------------------------HPDIELIIIGNGPD--ELKRL--- 50 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHH---------------------------STTEEEEEECESS---HHCCH---
T ss_pred ccccccccccccccccchhhhHHHHHHHH---------------------------CcCEEEEEEeCCHH--HHHHh---
Confidence 47899999999999999999 99999887 89999999999876 23333
Q ss_pred cCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe-CCHH
Q 011690 344 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF-SSSS 422 (479)
Q Consensus 344 ~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~-~~~~ 422 (479)
..++|.|+|. + +++.+++++||++++|+. .++++|.+++|||++|+|||+++. +..+++.....|.++ ++++
T Consensus 51 -~~~~v~~~g~-~--~e~~~~l~~~dv~l~p~~--~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~~~~~~ 123 (135)
T PF13692_consen 51 -RRPNVRFHGF-V--EELPEILAAADVGLIPSR--FNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLVANDPE 123 (135)
T ss_dssp -HHCTEEEE-S----HHHHHHHHC-SEEEE-BS--S-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE-TT-HH
T ss_pred -cCCCEEEcCC-H--HHHHHHHHhCCEEEEEee--CCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEECCCHH
Confidence 1268999997 6 689999999999999842 345799999999999999999999 566677656667666 7799
Q ss_pred HHHHHHHHHHh
Q 011690 423 ELADQLLMLFK 433 (479)
Q Consensus 423 ~la~~l~~l~~ 433 (479)
+++++|.++++
T Consensus 124 ~l~~~i~~l~~ 134 (135)
T PF13692_consen 124 ELAEAIERLLN 134 (135)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999987
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.70 E-value=7e-15 Score=153.60 Aligned_cols=314 Identities=13% Similarity=0.054 Sum_probs=182.9
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011690 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (479)
Q Consensus 23 ~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~ 102 (479)
..+..|.++ +++|.+++.++.... ......+.++..++ ..++....+.+..+.+.+.+ ...++ +..+|
T Consensus 23 al~~~l~~~-~~~~~~~g~gg~~m~-~~g~~~~~~~~~l~-----v~G~~~~l~~~~~~~~~~~~----~~~~l-~~~kP 90 (385)
T TIGR00215 23 GLRQQLKEH-YPNARFIGVAGPRMA-AEGCEVLYSMEELS-----VMGLREVLGRLGRLLKIRKE----VVQLA-KQAKP 90 (385)
T ss_pred HHHHHHHhc-CCCcEEEEEccHHHH-hCcCccccChHHhh-----hccHHHHHHHHHHHHHHHHH----HHHHH-HhcCC
Confidence 345555554 899999986653211 11111123333333 11111111222222233332 22222 23899
Q ss_pred cEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHH
Q 011690 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAM 182 (479)
Q Consensus 103 DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 182 (479)
|+|+..+-++++..+ + .+++..|+|+++.. .+ ..+.. ... - .+.+.+.+|.++|+++..
T Consensus 91 d~vi~~g~~~~~~~~-a-~aa~~~gip~v~~i--~P-~~waw----~~~-------~-----~r~l~~~~d~v~~~~~~e 149 (385)
T TIGR00215 91 DLLVGIDAPDFNLTK-E-LKKKDPGIKIIYYI--SP-QVWAW----RKW-------R-----AKKIEKATDFLLAILPFE 149 (385)
T ss_pred CEEEEeCCCCccHHH-H-HHHhhCCCCEEEEe--CC-cHhhc----Ccc-------h-----HHHHHHHHhHhhccCCCc
Confidence 999999855554332 2 24556799988543 11 11110 000 0 334557799999999999
Q ss_pred HHHHHHhhCCeEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCCC
Q 011690 183 QHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPN 262 (479)
Q Consensus 183 ~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (479)
.+.+.+ +|.++.++.|+..+.+.+... .+.+.+. .++++++
T Consensus 150 ~~~~~~-~g~~~~~vGnPv~~~~~~~~~-~~~~~r~-------------------------------------~lgl~~~ 190 (385)
T TIGR00215 150 KAFYQK-KNVPCRFVGHPLLDAIPLYKP-DRKSARE-------------------------------------KLGIDHN 190 (385)
T ss_pred HHHHHh-cCCCEEEECCchhhhccccCC-CHHHHHH-------------------------------------HcCCCCC
Confidence 888764 477877777763222221100 1112111 2345566
Q ss_pred CCeEEEEEe-cCCC-CCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE-ecCCChHHHHH
Q 011690 263 RPALVVSST-SWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYEE 339 (479)
Q Consensus 263 ~~~~i~~~g-~~~~-~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv-G~G~~~~~l~~ 339 (479)
++.+++..| |..+ .|++..+++|+..+.++ .|++++++. +.+...+.+++
T Consensus 191 ~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~---------------------------~p~~~~vi~~~~~~~~~~~~~ 243 (385)
T TIGR00215 191 GETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ---------------------------EPDLRRVLPVVNFKRRLQFEQ 243 (385)
T ss_pred CCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCchhHHHHHH
Confidence 775655555 5555 68999999999998765 789988665 46666777777
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-Cccchh----------
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEE---------- 407 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~~~e---------- 407 (479)
..++++. .+|.+.+. ++..+|++||++|++ | |.+.+|+|+||+|+|.+. .+..+.
T Consensus 244 ~~~~~~~~~~v~~~~~-----~~~~~l~aADl~V~~---S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~ 310 (385)
T TIGR00215 244 IKAEYGPDLQLHLIDG-----DARKAMFAADAALLA---S-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTD 310 (385)
T ss_pred HHHHhCCCCcEEEECc-----hHHHHHHhCCEEeec---C-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCC
Confidence 7777665 35665542 567899999999997 3 446779999999988873 322222
Q ss_pred ------ccccCccEEEe--C--CHHHHHHHHHHHHhcCCCCH----HHHHHHHHHHHHh
Q 011690 408 ------LVKVDKNGLLF--S--SSSELADQLLMLFKGFPDDS----DVLKKLRNGTLEM 452 (479)
Q Consensus 408 ------~i~~~~~G~l~--~--~~~~la~~l~~l~~~~~~~~----~~~~~~~~~~~~~ 452 (479)
++.+....-.+ + +++.+++.+.++++ |+ +.++++++...+.
T Consensus 311 ~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~----~~~~~~~~~~~~~~~~~~~ 365 (385)
T TIGR00215 311 YISLPNILANRLLVPELLQEECTPHPLAIALLLLLE----NGLKAYKEMHRERQFFEEL 365 (385)
T ss_pred eeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhc----CCcccHHHHHHHHHHHHHH
Confidence 22221111111 2 48899999999998 46 7777776666554
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=155.58 Aligned_cols=159 Identities=20% Similarity=0.216 Sum_probs=134.4
Q ss_pred eEEEEEe--cCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh---HHHHH
Q 011690 265 ALVVSST--SWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---ESYEE 339 (479)
Q Consensus 265 ~~i~~~g--~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~---~~l~~ 339 (479)
..+++++ |+ ++|.++.+|+|+..+..+ +|+++|.+.|.|... +.+++
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~---------------------------~p~~~L~~~gy~~~~~~~~~l~~ 371 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILK---------------------------NPDYELKILTYNNDNDITQLLED 371 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhh---------------------------CCCeEEEEEEecCchhHHHHHHH
Confidence 3677888 99 999999999999999886 999999999987543 56666
Q ss_pred HHHHcCCC------------------------------cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHH
Q 011690 340 KIRRLRLK------------------------------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD 389 (479)
Q Consensus 340 ~~~~~~l~------------------------------~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llE 389 (479)
.+++++++ +|.|.|. .+..++...|..+.++|.+ |..+||+ ..+|
T Consensus 372 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy-~~e~dl~~~~~~arl~id~---s~~eg~~-~~ie 446 (519)
T TIGR03713 372 ILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTL-TNEEDLISALDKLRLIIDL---SKEPDLY-TQIS 446 (519)
T ss_pred HHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEec-CCHHHHHHHHhhheEEEEC---CCCCChH-HHHH
Confidence 66666443 7999997 5555999999999999998 7789999 9999
Q ss_pred HHhCCCcEEEecCccchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHH
Q 011690 390 MFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWE 463 (479)
Q Consensus 390 ama~G~PVIas~~~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 463 (479)
|++.|+|+| + -+..++|++++||+++++.++|++++..++. +++.++++..++.+....++=+.-|+
T Consensus 447 AiS~GiPqI--n-yg~~~~V~d~~NG~li~d~~~l~~al~~~L~----~~~~wn~~~~~sy~~~~~yS~~~i~~ 513 (519)
T TIGR03713 447 GISAGIPQI--N-KVETDYVEHNKNGYIIDDISELLKALDYYLD----NLKNWNYSLAYSIKLIDDYSSENIIE 513 (519)
T ss_pred HHHcCCCee--e-cCCceeeEcCCCcEEeCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 999999999 3 3457999999999999999999999999999 58899999999888665555554443
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.1e-12 Score=137.94 Aligned_cols=136 Identities=13% Similarity=0.076 Sum_probs=112.4
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCC----EEEEEEecCC--------
Q 011690 265 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITGKGP-------- 332 (479)
Q Consensus 265 ~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~l~IvG~G~-------- 332 (479)
.+|++++|+++.||+...++|+..+.++ +|+ ++|+++|.+.
T Consensus 286 kiIl~VDRLDy~KGI~~kl~Afe~~L~~---------------------------~Pe~~gkv~Lvqi~~psr~~v~~y~ 338 (487)
T TIGR02398 286 KLILSAERVDYTKGILEKLNAYERLLER---------------------------RPELLGKVTLVTACVPAASGMTIYD 338 (487)
T ss_pred eEEEEecccccccCHHHHHHHHHHHHHh---------------------------CccccCceEEEEEeCCCcccchHHH
Confidence 4899999999999999999999998775 775 7999998653
Q ss_pred -ChHHHHHHHHHc-------CC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC----cEEE
Q 011690 333 -DKESYEEKIRRL-------RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL----PVCA 399 (479)
Q Consensus 333 -~~~~l~~~~~~~-------~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~----PVIa 399 (479)
.+.++++.+.+. +. +-+.|.+. ++.+++..+|+.||+++++ +..+|+.++..|+|+|+. |+|.
T Consensus 339 ~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~-v~~~el~alYr~ADV~lvT---~lrDGmNLVa~Eyva~~~~~~GvLIL 414 (487)
T TIGR02398 339 ELQGQIEQAVGRINGRFARIGWTPLQFFTRS-LPYEEVSAWFAMADVMWIT---PLRDGLNLVAKEYVAAQGLLDGVLVL 414 (487)
T ss_pred HHHHHHHHHHHHHhhccCCCCCccEEEEcCC-CCHHHHHHHHHhCCEEEEC---ccccccCcchhhHHhhhcCCCCCEEE
Confidence 233444444443 34 33667777 9999999999999999998 677888889999999998 9999
Q ss_pred ecCccchhccccCccEEEe--CCHHHHHHHHHHHHhc
Q 011690 400 VSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKG 434 (479)
Q Consensus 400 s~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~ 434 (479)
|..+|..+.+ ..++++ -|++++|++|.+.++.
T Consensus 415 SefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~m 448 (487)
T TIGR02398 415 SEFAGAAVEL---KGALLTNPYDPVRMDETIYVALAM 448 (487)
T ss_pred eccccchhhc---CCCEEECCCCHHHHHHHHHHHHcC
Confidence 9988887666 357888 4699999999999996
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-10 Score=120.31 Aligned_cols=115 Identities=23% Similarity=0.416 Sum_probs=87.9
Q ss_pred CEEE-EEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe
Q 011690 322 RLLF-IITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 400 (479)
Q Consensus 322 ~~~l-~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas 400 (479)
++.+ +++|.+. .+++++.-.+++. +...++ .++|.++|++||++|+= .| ++++.|..++|+|+|-.
T Consensus 212 ~~~v~~~~G~~~-~~~~~~~~~~~~~--~~v~~f---~~dm~~~~~~ADLvIsR----aG---a~Ti~E~~a~g~P~Ili 278 (357)
T COG0707 212 RIQVIHQTGKND-LEELKSAYNELGV--VRVLPF---IDDMAALLAAADLVISR----AG---ALTIAELLALGVPAILV 278 (357)
T ss_pred CeEEEEEcCcch-HHHHHHHHhhcCc--EEEeeH---HhhHHHHHHhccEEEeC----Cc---ccHHHHHHHhCCCEEEe
Confidence 3555 5667665 5666665555555 888898 88999999999999962 23 23999999999999988
Q ss_pred cCcc--------chhccccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 401 SYSC--------IEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 401 ~~~~--------~~e~i~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
..+. ....+++...|.++. +++.+++.|.++++ +++.+++|++++++..
T Consensus 279 P~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~----~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 279 PYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLS----NPEKLKAMAENAKKLG 339 (357)
T ss_pred CCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhc----CHHHHHHHHHHHHhcC
Confidence 6433 335566666777773 36799999999999 5899999999999864
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.7e-13 Score=117.44 Aligned_cols=152 Identities=20% Similarity=0.228 Sum_probs=82.8
Q ss_pred hHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011690 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI 99 (479)
Q Consensus 20 r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~ 99 (479)
.+...+..|+++ ||+|+|+++....... .....++++++++. ...............+.+.+ ..+.
T Consensus 6 ~~~~l~~~L~~~-G~~V~v~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l----------~~~~ 71 (160)
T PF13579_consen 6 YVRELARALAAR-GHEVTVVTPQPDPEDD-EEEEDGVRVHRLPL--PRRPWPLRLLRFLRRLRRLL----------AARR 71 (160)
T ss_dssp HHHHHHHHHHHT-T-EEEEEEE---GGG--SEEETTEEEEEE----S-SSSGGGHCCHHHHHHHHC----------HHCT
T ss_pred HHHHHHHHHHHC-CCEEEEEecCCCCccc-ccccCCceEEeccC--CccchhhhhHHHHHHHHHHH----------hhhc
Confidence 445567788886 9999999987764432 23467899999982 21111111112222222222 1134
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+++ .....++.++++..++|+|+++|+..... . .....++++++ ++...+.||.++++|
T Consensus 72 ~~~Dvv~~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-----~-~~~~~~~~~~~-----~~~~~~~ad~vi~~S 137 (160)
T PF13579_consen 72 ERPDVVHAHS---PTAGLVAALARRRRGIPLVVTVHGTLFRR-----G-SRWKRRLYRWL-----ERRLLRRADRVIVVS 137 (160)
T ss_dssp ---SEEEEEH---HHHHHHHHHHHHHHT--EEEE-SS-T------------HHHHHHHHH-----HHHHHHH-SEEEESS
T ss_pred cCCeEEEecc---cchhHHHHHHHHccCCcEEEEECCCchhh-----c-cchhhHHHHHH-----HHHHHhcCCEEEECC
Confidence 7999999999 33556666777677999999999854110 0 12233344444 888889999999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCC
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQ 200 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~ 200 (479)
+.+++.+.+ +|.+ +.|||||
T Consensus 138 ~~~~~~l~~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 138 EAMRRYLRR-YGVPPDRIHVIPNG 160 (160)
T ss_dssp HHHHHHHHH-H---GGGEEE----
T ss_pred HHHHHHHHH-hCCCCCcEEEeCcC
Confidence 999999998 6775 9999997
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.4e-10 Score=129.67 Aligned_cols=269 Identities=10% Similarity=0.054 Sum_probs=171.1
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhc-CCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhH--HHHHHHHhhcCCEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSV--LRIEKYYGKMANGCL 176 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~-~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~e~~~~~~ad~vi 176 (479)
..-|+|-+|. +..+++..+++... +.++-+-+|....+ + .+++++-. ..++-+ -.||.|=
T Consensus 230 ~~gD~VWVHD---YHL~LlP~~LR~~~p~~~IGfFlHiPFPs---------~---Eifr~LP~r~elL~gl--L~aDlIG 292 (934)
T PLN03064 230 EEGDVVWCHD---YHLMFLPKCLKEYNSNMKVGWFLHTPFPS---------S---EIHRTLPSRSELLRSV--LAADLVG 292 (934)
T ss_pred CCCCEEEEec---chhhHHHHHHHHhCCCCcEEEEecCCCCC---------h---HHHhhCCcHHHHHHHH--hcCCeEE
Confidence 3457999999 77777777777653 55666667754211 1 11222110 011111 2588888
Q ss_pred EeCHHHHHHHHHh----hCC------------e--EEEecCC-CCCCCCCCChH-HHHHHHHhhhhcccCCCCccccccc
Q 011690 177 CVTQAMQHELAQN----WGI------------K--ATVLYDQ-PPEFFHPTSLE-EKHELFCRLNKILHQPLGVQDCVSN 236 (479)
Q Consensus 177 ~vS~~~~~~l~~~----~~~------------~--~~vi~n~-~~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (479)
+.|......+.+. .|. . +.++|-| |++.|...... +-.+....+.
T Consensus 293 FqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr--------------- 357 (934)
T PLN03064 293 FHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELK--------------- 357 (934)
T ss_pred eCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHH---------------
Confidence 8888777665542 121 1 4455666 65555432110 0001011111
Q ss_pred cccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCc
Q 011690 237 AGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 316 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (479)
.. + .++ .+|++++|+.+.||+...+.|+..+.++
T Consensus 358 ------------------~~--~-~g~-kiIlgVDRLD~~KGI~~kL~AfE~fL~~------------------------ 391 (934)
T PLN03064 358 ------------------ER--F-AGR-KVMLGVDRLDMIKGIPQKILAFEKFLEE------------------------ 391 (934)
T ss_pred ------------------HH--h-CCc-eEEEEeeccccccCHHHHHHHHHHHHHh------------------------
Confidence 01 1 133 4999999999999999999999987765
Q ss_pred ccCCCCEE--EEEE-------ecCCChHHHHHHHHH----cC-------CCcEEEecCCCCcchHHHHHHcCCEEEEccc
Q 011690 317 QYLYPRLL--FIIT-------GKGPDKESYEEKIRR----LR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHT 376 (479)
Q Consensus 317 ~~~~p~~~--l~Iv-------G~G~~~~~l~~~~~~----~~-------l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~ 376 (479)
+|+++ ++++ |+++..+.+++.+.+ .+ ..-|.+...-++.+++..+|+.||++|++
T Consensus 392 ---~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvT-- 466 (934)
T PLN03064 392 ---NPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVT-- 466 (934)
T ss_pred ---CccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeC--
Confidence 77753 4555 555555555544433 22 12266665558999999999999999998
Q ss_pred CCCCCCCcHHHHHHHhC-----CCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 011690 377 SSSGLDLPMKVVDMFGC-----GLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGT 449 (479)
Q Consensus 377 ~s~~e~~p~~llEama~-----G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~ 449 (479)
|..+|+.++..|||+| |.+|+ |..+|..+.+ +..++++ .|.+++|++|.+.+.. ++++++...+..
T Consensus 467 -slrDGmNLva~Eyva~~~~~~GvLIL-SEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~M---~~~Er~~r~~~~ 539 (934)
T PLN03064 467 -SLRDGMNLVSYEFVACQDSKKGVLIL-SEFAGAAQSL--GAGAILVNPWNITEVAASIAQALNM---PEEEREKRHRHN 539 (934)
T ss_pred -ccccccCchHHHHHHhhcCCCCCeEE-eCCCchHHHh--CCceEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHH
Confidence 7778899999999999 45555 8877777766 4468888 4699999999999985 567776666666
Q ss_pred HHhhhhhch
Q 011690 450 LEMGLSARW 458 (479)
Q Consensus 450 ~~~~~~~~w 458 (479)
++.....+|
T Consensus 540 ~~~V~~~d~ 548 (934)
T PLN03064 540 FMHVTTHTA 548 (934)
T ss_pred HhhcccCCH
Confidence 665433333
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.8e-10 Score=116.67 Aligned_cols=302 Identities=12% Similarity=0.093 Sum_probs=162.8
Q ss_pred CCChhHHHHHHHHHhh---CCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 011690 16 GRSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL 92 (479)
Q Consensus 16 g~~~r~~~~a~~La~~---~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 92 (479)
|+++|-.+=|+.++++ .||+|.+++....-. .......|++++.++ ..+..+.. ..+.+..+.+.+...+...
T Consensus 9 GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e-~~l~~~~g~~~~~~~--~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 84 (352)
T PRK12446 9 GGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIE-KTIIEKENIPYYSIS--SGKLRRYF-DLKNIKDPFLVMKGVMDAY 84 (352)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccc-cccCcccCCcEEEEe--ccCcCCCc-hHHHHHHHHHHHHHHHHHH
Confidence 4456666656666544 599999998555432 234444578888787 22111110 1122333333333322222
Q ss_pred HHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcC
Q 011690 93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMA 172 (479)
Q Consensus 93 ~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~a 172 (479)
. ++ +..+||+|+.+. .+.. +-+.++++..|+|+++.-.+.. ... . .+.+.+.+
T Consensus 85 ~-i~-~~~kPdvvi~~G--gy~s-~p~~~aa~~~~~p~~i~e~n~~----------~g~-------~-----nr~~~~~a 137 (352)
T PRK12446 85 V-RI-RKLKPDVIFSKG--GFVS-VPVVIGGWLNRVPVLLHESDMT----------PGL-------A-----NKIALRFA 137 (352)
T ss_pred H-HH-HhcCCCEEEecC--chhh-HHHHHHHHHcCCCEEEECCCCC----------ccH-------H-----HHHHHHhh
Confidence 2 22 348999999987 2222 2334778889999887333221 011 1 34455678
Q ss_pred CEEEEeCHHHHHHHHHhhC-CeEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcc
Q 011690 173 NGCLCVTQAMQHELAQNWG-IKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTS 251 (479)
Q Consensus 173 d~vi~vS~~~~~~l~~~~~-~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (479)
+.+.+.=+...+ .+. .++.+.-|.....|.... +...
T Consensus 138 ~~v~~~f~~~~~----~~~~~k~~~tG~Pvr~~~~~~~---~~~~----------------------------------- 175 (352)
T PRK12446 138 SKIFVTFEEAAK----HLPKEKVIYTGSPVREEVLKGN---REKG----------------------------------- 175 (352)
T ss_pred CEEEEEccchhh----hCCCCCeEEECCcCCccccccc---chHH-----------------------------------
Confidence 887654433322 222 234444444223332111 1111
Q ss_pred ccccccccCCCCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE-EEEe
Q 011690 252 LAGIDVFLKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITG 329 (479)
Q Consensus 252 ~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-~IvG 329 (479)
+..+++.+++|.++++.|+... +.+.. +.+++..+. .++++ +++|
T Consensus 176 --~~~~~l~~~~~~iLv~GGS~Ga-~~in~~~~~~l~~l~------------------------------~~~~vv~~~G 222 (352)
T PRK12446 176 --LAFLGFSRKKPVITIMGGSLGA-KKINETVREALPELL------------------------------LKYQIVHLCG 222 (352)
T ss_pred --HHhcCCCCCCcEEEEECCccch-HHHHHHHHHHHHhhc------------------------------cCcEEEEEeC
Confidence 1122455678888888888764 23322 222232221 12444 4667
Q ss_pred cCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc-----c
Q 011690 330 KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-----C 404 (479)
Q Consensus 330 ~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~-----~ 404 (479)
.+. +++...+. .++...++ + .++++++|++||++|+= + | ++++.|++++|+|+|..... +
T Consensus 223 ~~~----~~~~~~~~--~~~~~~~f-~-~~~m~~~~~~adlvIsr---~-G---~~t~~E~~~~g~P~I~iP~~~~~~~~ 287 (352)
T PRK12446 223 KGN----LDDSLQNK--EGYRQFEY-V-HGELPDILAITDFVISR---A-G---SNAIFEFLTLQKPMLLIPLSKFASRG 287 (352)
T ss_pred Cch----HHHHHhhc--CCcEEecc-h-hhhHHHHHHhCCEEEEC---C-C---hhHHHHHHHcCCCEEEEcCCCCCCCc
Confidence 553 22222221 23444565 1 26899999999999962 2 2 23899999999999988542 1
Q ss_pred ----chhccccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHH
Q 011690 405 ----IEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVL 442 (479)
Q Consensus 405 ----~~e~i~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~ 442 (479)
..+.+.+...|..+. +++.+++.+.++++ |++.+
T Consensus 288 ~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~----~~~~~ 329 (352)
T PRK12446 288 DQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSH----NNEKY 329 (352)
T ss_pred hHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHc----CHHHH
Confidence 224555555666652 47899999999987 45554
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.1e-12 Score=113.45 Aligned_cols=168 Identities=19% Similarity=0.202 Sum_probs=82.7
Q ss_pred EEecCCCCChhHHHHHHHHHhh---CCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHH
Q 011690 10 VVLGDLGRSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLI 86 (479)
Q Consensus 10 ~~~~~~g~~~r~~~~a~~La~~---~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 86 (479)
++.......||++..+..|+++ .||+|+|++.....+.... ........+ ................+.+.+.
T Consensus 3 i~~~~~~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~ 77 (177)
T PF13439_consen 3 ITNIFLPNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE---LVKIFVKIP--YPIRKRFLRSFFFMRRLRRLIK 77 (177)
T ss_dssp EECC-TTSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST---EEEE---TT---SSTSS--HHHHHHHHHHHHHH
T ss_pred EEEecCCCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh---ccceeeeee--cccccccchhHHHHHHHHHHHH
Confidence 3333444566777665555544 6999999997765433111 001111111 0111111111111122222222
Q ss_pred HHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHH
Q 011690 87 QFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEK 166 (479)
Q Consensus 87 ~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 166 (479)
+ .+||+||+|.++...... ++.. ++|++.+.|+....... .....+....+...+ ++
T Consensus 78 -----------~-~~~DiVh~~~~~~~~~~~---~~~~--~~~~v~~~H~~~~~~~~-~~~~~~~~~~~~~~~-----~~ 134 (177)
T PF13439_consen 78 -----------K-EKPDIVHIHGPPAFWIAL---LACR--KVPIVYTIHGPYFERRF-LKSKLSPYSYLNFRI-----ER 134 (177)
T ss_dssp -----------H-HT-SEEECCTTHCCCHHH---HHHH--CSCEEEEE-HHH--HHT-TTTSCCCHHHHHHCT-----TH
T ss_pred -----------H-cCCCeEEecccchhHHHH---Hhcc--CCCEEEEeCCCcccccc-cccccchhhhhhhhh-----hh
Confidence 2 699999999954433222 2222 89999999987521000 011123333333333 55
Q ss_pred HHhhcCCEEEEeCHHHHHHHHHhhCCe---EEEecCC-CCCCCC
Q 011690 167 YYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFH 206 (479)
Q Consensus 167 ~~~~~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~ 206 (479)
.+.+.+|.++|+|+.+++++.+ +|++ +.+|||| |.+.|.
T Consensus 135 ~~~~~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 135 KLYKKADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHCCSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH-
T ss_pred hHHhcCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHcC
Confidence 6678899999999999999999 7865 9999999 877773
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.6e-09 Score=113.78 Aligned_cols=251 Identities=15% Similarity=0.175 Sum_probs=152.2
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEE-EecCchhhhhhhhcCCCchhHHHHHHHh---HHH--HHHHHhhcCC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRCFS---VLR--IEKYYGKMAN 173 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii-~~h~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~e~~~~~~ad 173 (479)
.+||+|+...- ++..++++..|+|+++ -.|...+...+ +........+..+. +.. -.+...+.|+
T Consensus 92 ~~p~~v~~~Gg------~v~~~aA~~~~~p~~~~~~~esn~~~~~---~~~~~~~~~~~~~~G~~~~p~e~n~l~~~~a~ 162 (396)
T TIGR03492 92 KKGDLIVAVGD------IVPLLFAWLSGKPYAFVGTAKSDYYWES---GPRRSPSDEYHRLEGSLYLPWERWLMRSRRCL 162 (396)
T ss_pred hcCCEEEEECc------HHHHHHHHHcCCCceEEEeeccceeecC---CCCCccchhhhccCCCccCHHHHHHhhchhhC
Confidence 39999998871 2245667888999877 33432211000 00000001111100 000 0345667899
Q ss_pred EEEEeCHHHHHHHHHhhCCeEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccc
Q 011690 174 GCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLA 253 (479)
Q Consensus 174 ~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (479)
.+.+-.+...+.+.+. |.++.++-|.-.+....... .
T Consensus 163 ~v~~~~~~t~~~l~~~-g~k~~~vGnPv~d~l~~~~~---~--------------------------------------- 199 (396)
T TIGR03492 163 AVFVRDRLTARDLRRQ-GVRASYLGNPMMDGLEPPER---K--------------------------------------- 199 (396)
T ss_pred EEeCCCHHHHHHHHHC-CCeEEEeCcCHHhcCccccc---c---------------------------------------
Confidence 9998888888877654 88888887762222211110 0
Q ss_pred ccccccCCCCCeEEEEEecCC--CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEe-c
Q 011690 254 GIDVFLKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-K 330 (479)
Q Consensus 254 ~~~~~~~~~~~~~i~~~g~~~--~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG-~ 330 (479)
++.++.+.+++..|+-. ..++++.+++++..+.+ .+++.+++.= .
T Consensus 200 ----~l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~----------------------------~~~~~~v~~~~~ 247 (396)
T TIGR03492 200 ----PLLTGRFRIALLPGSRPPEAYRNLKLLLRALEALPD----------------------------SQPFVFLAAIVP 247 (396)
T ss_pred ----ccCCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhh----------------------------CCCeEEEEEeCC
Confidence 12344556777777543 34677899999988853 2567775433 4
Q ss_pred CCChHHHHHHHHHcCCC---------------cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC
Q 011690 331 GPDKESYEEKIRRLRLK---------------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL 395 (479)
Q Consensus 331 G~~~~~l~~~~~~~~l~---------------~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~ 395 (479)
+...+.+++...+.++. ++.+... ..++.++|++||++|+- +| .+..|++++|+
T Consensus 248 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~l~~ADlvI~r----SG----t~T~E~a~lg~ 316 (396)
T TIGR03492 248 SLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLG---RGAFAEILHWADLGIAM----AG----TATEQAVGLGK 316 (396)
T ss_pred CCCHHHHHHHHHhcCceecCCccccchhhccCceEEEec---hHhHHHHHHhCCEEEEC----cC----HHHHHHHHhCC
Confidence 56667777777665542 2566555 67899999999999984 33 35599999999
Q ss_pred cEEEecCccch---hcccc-----CccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 011690 396 PVCAVSYSCIE---ELVKV-----DKNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGT 449 (479)
Q Consensus 396 PVIas~~~~~~---e~i~~-----~~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~ 449 (479)
|+|.....+.. .+.+. +....+. .+++.+++.+.++++ |++.+++|.+++
T Consensus 317 P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~----d~~~~~~~~~~~ 375 (396)
T TIGR03492 317 PVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLA----DPELLERCRRNG 375 (396)
T ss_pred CEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHc----CHHHHHHHHHHH
Confidence 99999743331 22222 3333333 458999999999998 588888887433
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.2e-10 Score=118.88 Aligned_cols=265 Identities=18% Similarity=0.194 Sum_probs=152.1
Q ss_pred HHHHHHhhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCC-CCCCCCCCChH-HHH-HHHHhhhhcccCCCCccccccccc
Q 011690 163 RIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLE-EKH-ELFCRLNKILHQPLGVQDCVSNAG 238 (479)
Q Consensus 163 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 238 (479)
.+|+...+.||...+||+-...+-....+.+ -.|+||| +.+.|.....- ..+ ....++..
T Consensus 213 ~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~---------------- 276 (633)
T PF05693_consen 213 SIERAAAHYADVFTTVSEITAKEAEHLLKRKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHE---------------- 276 (633)
T ss_dssp HHHHHHHHHSSEEEESSHHHHHHHHHHHSS--SEE----B-GGGTSSTTHHHHHHHHHHHHHHH----------------
T ss_pred HHHHHHHHhcCeeeehhhhHHHHHHHHhCCCCCEEcCCCccccccccchHHHHHHHHHHHHHHH----------------
Confidence 3488888999999999999998877666665 6788999 66666554321 111 11222211
Q ss_pred cCCcccccchhcc-ccccccccCCCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccC-------------CCc
Q 011690 239 MEGQKADETIFTS-LAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNED-------------DST 303 (479)
Q Consensus 239 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~-------------~~~ 303 (479)
|.. ...+.+.+.+++.+++..+||.+ ..||+|.+|||+..|...+.+. +.+ .+-
T Consensus 277 ----------fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~-~~~~tVVaFii~pa~~~~~ 345 (633)
T PF05693_consen 277 ----------FVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQA-GSDKTVVAFIIVPAKTNSF 345 (633)
T ss_dssp ----------HHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHT-T-S-EEEEEEE---SEEEE
T ss_pred ----------HHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhc-CCCCeEEEEEEecCccCCc
Confidence 100 01122334456677888999998 5899999999999998764332 000 011
Q ss_pred hhh-----hhHhhhccC-------------------------------------------cccCCCCEEEEEEecCCChH
Q 011690 304 NEE-----VFLKEISDG-------------------------------------------KQYLYPRLLFIITGKGPDKE 335 (479)
Q Consensus 304 ~~~-----~~~~~~~~~-------------------------------------------~~~~~p~~~l~IvG~G~~~~ 335 (479)
|-| .+.+++++. +....|.+.=.-.- ....+
T Consensus 346 ~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~-d~~~D 424 (633)
T PF05693_consen 346 NVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLH-DDSND 424 (633)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEET-TTTT-
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCC-CCccC
Confidence 111 112222111 11112222111111 23456
Q ss_pred HHHHHHHHcCC-C------cEEEecCCCCcc------hHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 336 SYEEKIRRLRL-K------RVAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 336 ~l~~~~~~~~l-~------~V~f~G~~~~~~------~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
.+-..++++++ + +|+|..-+++.. ++.+++..+|++|+| |..|.+|.+-+|+.++|+|.|.|+.
T Consensus 425 pILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFP---SYYEPWGYTPlE~~a~gVPsITTnL 501 (633)
T PF05693_consen 425 PILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFP---SYYEPWGYTPLECTAFGVPSITTNL 501 (633)
T ss_dssp HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE-----SSBSS-HHHHHHHHTT--EEEETT
T ss_pred HHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeec---cccccccCChHHHhhcCCceeeccc
Confidence 77778888876 2 477877666544 789999999999999 8889999999999999999999999
Q ss_pred ccchhcccc-----CccEEEe-----CC----HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHH
Q 011690 403 SCIEELVKV-----DKNGLLF-----SS----SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE 461 (479)
Q Consensus 403 ~~~~e~i~~-----~~~G~l~-----~~----~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 461 (479)
+|+...++. ...|+.+ .+ +++|++.|...... +...+..+|+++.+......|..-
T Consensus 502 sGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~---~~rqri~~Rn~ae~LS~~~dW~~~ 571 (633)
T PF05693_consen 502 SGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQL---SRRQRIIQRNRAERLSDLADWKNF 571 (633)
T ss_dssp BHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT-----HHHHHHHHHHHHHHGGGGBHHHH
T ss_pred hhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhCCHHHH
Confidence 887644442 3457776 23 44566666666664 678888899999887778888653
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.4e-08 Score=111.58 Aligned_cols=182 Identities=11% Similarity=0.022 Sum_probs=129.2
Q ss_pred cCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC-----
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD----- 333 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~----- 333 (479)
+.++.+ ++++++|+..+|+.+.++.++..+.+-+ . +...++.|++.|+|.-
T Consensus 385 ~dpd~~-~ig~v~Rl~~yKr~dLil~~i~~l~~i~-------------------~----~~~~pvq~V~~Gka~p~d~~g 440 (601)
T TIGR02094 385 LDPDVL-TIGFARRFATYKRADLIFRDLERLARIL-------------------N----NPERPVQIVFAGKAHPADGEG 440 (601)
T ss_pred cCCCCc-EEEEEEcchhhhhHHHHHHHHHHHHHHh-------------------h----CCCCCeEEEEEEecCcccchH
Confidence 345665 8999999999999999999988886420 0 0013599999999852
Q ss_pred ---hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEE-cccCCC-CCCCcHHHHHHHhCCCcEEEecCccchh
Q 011690 334 ---KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVC-LHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEE 407 (479)
Q Consensus 334 ---~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~-p~~~s~-~e~~p~~llEama~G~PVIas~~~~~~e 407 (479)
...+.+.+++... .+|.|+-. .+.+--..+++.||+++. | +. .|..|+.=+=||..|.+.+++--|...|
T Consensus 441 k~~i~~i~~la~~~~~~~kv~f~~~-Yd~~lA~~i~aG~Dv~L~~P---sr~~EacGtsqMka~~nGgL~~sv~DG~~~E 516 (601)
T TIGR02094 441 KEIIQRIVEFSKRPEFRGRIVFLEN-YDINLARYLVSGVDVWLNNP---RRPLEASGTSGMKAAMNGVLNLSILDGWWGE 516 (601)
T ss_pred HHHHHHHHHHHhcccCCCCEEEEcC-CCHHHHHHHhhhheeEEeCC---CCCcCCchHHHHHHHHcCCceeecccCcccc
Confidence 3334444443224 57888765 567777889999999998 6 54 6778889999999999999998888878
Q ss_pred ccccCccEEEeC--------------CHHHHHHHHHHHH-hcCCCC-----HHHHHHHHHHHHHh-hhhhchHHHHHHHH
Q 011690 408 LVKVDKNGLLFS--------------SSSELADQLLMLF-KGFPDD-----SDVLKKLRNGTLEM-GLSARWATEWEEHA 466 (479)
Q Consensus 408 ~i~~~~~G~l~~--------------~~~~la~~l~~l~-~~~~~~-----~~~~~~~~~~~~~~-~~~~~w~~~~~~~~ 466 (479)
.. ++.|||.+. ++++|.++|.+.+ ..+-++ +..+.++.+++-.. ...++|+.+-++..
T Consensus 517 ~~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~ 595 (601)
T TIGR02094 517 GY-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYV 595 (601)
T ss_pred cC-CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 76 678999996 3678888887655 322112 45577777777662 22577776666555
Q ss_pred HHH
Q 011690 467 KPL 469 (479)
Q Consensus 467 ~~~ 469 (479)
..+
T Consensus 596 ~~y 598 (601)
T TIGR02094 596 DKF 598 (601)
T ss_pred HHh
Confidence 443
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.6e-08 Score=105.12 Aligned_cols=239 Identities=16% Similarity=0.131 Sum_probs=140.2
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+|++++ .....+.+.+++...++|++ ..|.-..+ .+ ...-.. .+...+.|+..++.+
T Consensus 92 ~~Pd~vlv~G--D~~~~la~alaA~~~~IPv~-HveaG~rs-----~~---~~eE~~--------r~~i~~la~l~f~~t 152 (365)
T TIGR03568 92 LKPDLVVVLG--DRFEMLAAAIAAALLNIPIA-HIHGGEVT-----EG---AIDESI--------RHAITKLSHLHFVAT 152 (365)
T ss_pred hCCCEEEEeC--CchHHHHHHHHHHHhCCcEE-EEECCccC-----CC---CchHHH--------HHHHHHHHhhccCCC
Confidence 7999999998 34455666678889999976 23322100 00 011111 223456688888888
Q ss_pred HHHHHHHHHhhCCe---EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 256 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
+..++.+.+. |.+ +.++-|...+.+.......+..+..+
T Consensus 153 ~~~~~~L~~e-g~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~------------------------------------- 194 (365)
T TIGR03568 153 EEYRQRVIQM-GEDPDRVFNVGSPGLDNILSLDLLSKEELEEK------------------------------------- 194 (365)
T ss_pred HHHHHHHHHc-CCCCCcEEEECCcHHHHHHhhhccCHHHHHHH-------------------------------------
Confidence 8888877765 653 55555541111111000011222222
Q ss_pred cccCCCCCeEEEEEecCC--CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh
Q 011690 257 VFLKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 334 (479)
Q Consensus 257 ~~~~~~~~~~i~~~g~~~--~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~ 334 (479)
+++.++++.+++..-+-+ .....+.+.+.++.+.+. ..++.++.-..++..
T Consensus 195 lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---------------------------~~~~~vi~P~~~p~~ 247 (365)
T TIGR03568 195 LGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---------------------------NKNYIFTYPNADAGS 247 (365)
T ss_pred hCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---------------------------ccCCEEEEeCCCCCc
Confidence 233333344444443322 222233344444444332 223433332233544
Q ss_pred HHHHHHHHHcC--CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccC
Q 011690 335 ESYEEKIRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 412 (479)
Q Consensus 335 ~~l~~~~~~~~--l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~ 412 (479)
+.+.+.++++. .++|.+.+. ++..++..+++.|+++|.- |++ -+-||.++|+|+|+. +.-+|.++.+
T Consensus 248 ~~i~~~i~~~~~~~~~v~l~~~-l~~~~~l~Ll~~a~~vitd---SSg-----gi~EA~~lg~Pvv~l--~~R~e~~~~g 316 (365)
T TIGR03568 248 RIINEAIEEYVNEHPNFRLFKS-LGQERYLSLLKNADAVIGN---SSS-----GIIEAPSFGVPTINI--GTRQKGRLRA 316 (365)
T ss_pred hHHHHHHHHHhcCCCCEEEECC-CChHHHHHHHHhCCEEEEc---Chh-----HHHhhhhcCCCEEee--cCCchhhhhc
Confidence 44454445432 468999998 9999999999999999953 434 348999999999954 5688888888
Q ss_pred ccEEEe-CCHHHHHHHHHHHHh
Q 011690 413 KNGLLF-SSSSELADQLLMLFK 433 (479)
Q Consensus 413 ~~G~l~-~~~~~la~~l~~l~~ 433 (479)
.+.+++ .+++++.+++.++.+
T Consensus 317 ~nvl~vg~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 317 DSVIDVDPDKEEIVKAIEKLLD 338 (365)
T ss_pred CeEEEeCCCHHHHHHHHHHHhC
Confidence 888877 579999999998544
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.2e-09 Score=98.88 Aligned_cols=175 Identities=14% Similarity=0.173 Sum_probs=110.4
Q ss_pred ceEEEEEecCC-CCChhHHHHHHHHHhh---CCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHH
Q 011690 5 GRACVVVLGDL-GRSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (479)
Q Consensus 5 ~~~~i~~~~~~-g~~~r~~~~a~~La~~---~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~ 80 (479)
++++|+-.-.+ ...||.+.+++.|+.+ .||+|+|.|....... ......|++++.+| .+..+. . ..
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~-~~~~y~gv~l~~i~---~~~~g~--~----~s 71 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPY-KEFEYNGVRLVYIP---APKNGS--A----ES 71 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCC-CCcccCCeEEEEeC---CCCCCc--h----HH
Confidence 55776664333 3477888888888766 5999999998765433 34557899999998 222211 1 11
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhc--CCcEEEEecCchhhhhhhhcCCCchhHHHHHH
Q 011690 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRC 158 (479)
Q Consensus 81 l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~--~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~ 158 (479)
+...+..+...++.......+.|+++++... . ..++..+.+++. |.|+++..|+..|.. .+++...+.+.
T Consensus 72 i~yd~~sl~~al~~~~~~~~~~~ii~ilg~~-~-g~~~~~~~r~~~~~g~~v~vN~DGlEWkR-----~KW~~~~k~~l- 143 (185)
T PF09314_consen 72 IIYDFLSLLHALRFIKQDKIKYDIILILGYG-I-GPFFLPFLRKLRKKGGKVVVNMDGLEWKR-----AKWGRPAKKYL- 143 (185)
T ss_pred HHHHHHHHHHHHHHHhhccccCCEEEEEcCC-c-cHHHHHHHHhhhhcCCcEEECCCcchhhh-----hhcCHHHHHHH-
Confidence 1111111111121111112368899998832 1 233444555543 569999998876432 22333333222
Q ss_pred HhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhC-CeEEEecCC
Q 011690 159 FSVLRIEKYYGKMANGCLCVTQAMQHELAQNWG-IKATVLYDQ 200 (479)
Q Consensus 159 ~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~-~~~~vi~n~ 200 (479)
...|+...+.||.+|+.|+.+++++.+.|+ .+.++|++|
T Consensus 144 ---k~~E~~avk~ad~lIaDs~~I~~y~~~~y~~~~s~~IaYG 183 (185)
T PF09314_consen 144 ---KFSEKLAVKYADRLIADSKGIQDYIKERYGRKKSTFIAYG 183 (185)
T ss_pred ---HHHHHHHHHhCCEEEEcCHHHHHHHHHHcCCCCcEEecCC
Confidence 233999999999999999999999999999 779999887
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.1e-10 Score=94.05 Aligned_cols=89 Identities=16% Similarity=0.308 Sum_probs=77.1
Q ss_pred EEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 011690 371 GVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTL 450 (479)
Q Consensus 371 ~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~ 450 (479)
++.| +...+++++++|+||||+|||+++.++..+++.++..++.++|++++.+++..+++ +++.+++++++++
T Consensus 2 ~Ln~---~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ll~----~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 2 NLNP---SRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYNDPEELAEKIEYLLE----NPEERRRIAKNAR 74 (92)
T ss_pred EeeC---CCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEECCHHHHHHHHHHHHC----CHHHHHHHHHHHH
Confidence 4555 33466888999999999999999999999999999999999999999999999999 6999999999998
Q ss_pred Hhh-hhhchHHHHHHHH
Q 011690 451 EMG-LSARWATEWEEHA 466 (479)
Q Consensus 451 ~~~-~~~~w~~~~~~~~ 466 (479)
+.. ..++|+..|++.+
T Consensus 75 ~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHhCCHHHHHHHHH
Confidence 764 4788888777654
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.8e-07 Score=96.91 Aligned_cols=319 Identities=18% Similarity=0.188 Sum_probs=191.2
Q ss_pred cCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcc-cccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 011690 13 GDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHA-AILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFM 90 (479)
Q Consensus 13 ~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~~~~~~-~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 90 (479)
..+|-.--..-.+..|.++ .++.+.|-|..++.... ...-.+.+....+|.. .+ ....+++..
T Consensus 57 aSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D---------~~---~~v~rFl~~--- 121 (419)
T COG1519 57 ASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD---------LP---IAVRRFLRK--- 121 (419)
T ss_pred cchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC---------ch---HHHHHHHHh---
Confidence 3354444445555566555 46777777755543221 1111234777777711 11 222344544
Q ss_pred HHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEE-ecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHh
Q 011690 91 LLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD-WHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYG 169 (479)
Q Consensus 91 ~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~-~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 169 (479)
.+||+.++...-.++.++ .-.+..++|+++- -.-.. +..+.++..+.+ .+.+.
T Consensus 122 ---------~~P~l~Ii~EtElWPnli---~e~~~~~~p~~LvNaRLS~---------rS~~~y~k~~~~-----~~~~~ 175 (419)
T COG1519 122 ---------WRPKLLIIMETELWPNLI---NELKRRGIPLVLVNARLSD---------RSFARYAKLKFL-----ARLLF 175 (419)
T ss_pred ---------cCCCEEEEEeccccHHHH---HHHHHcCCCEEEEeeeech---------hhhHHHHHHHHH-----HHHHH
Confidence 799986665533333332 2345678997762 11110 001111112222 55566
Q ss_pred hcCCEEEEeCHHHHHHHHHhhCCe-EEEecCCCCCCCCCCC---hHHHHHHHHhhhhcccCCCCccccccccccCCcccc
Q 011690 170 KMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTS---LEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKAD 245 (479)
Q Consensus 170 ~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (479)
+..|.|++.|+...+.+.+. |.+ +.+.-|- .++...+ ......+..+
T Consensus 176 ~~i~li~aQse~D~~Rf~~L-Ga~~v~v~GNl--Kfd~~~~~~~~~~~~~~r~~-------------------------- 226 (419)
T COG1519 176 KNIDLILAQSEEDAQRFRSL-GAKPVVVTGNL--KFDIEPPPQLAAELAALRRQ-------------------------- 226 (419)
T ss_pred HhcceeeecCHHHHHHHHhc-CCcceEEecce--eecCCCChhhHHHHHHHHHh--------------------------
Confidence 78999999999999998777 777 5555553 1111111 1111222222
Q ss_pred cchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE
Q 011690 246 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 325 (479)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l 325 (479)
+...+|.++..++ + +..-+.++++.+.++++ +||..+
T Consensus 227 -------------l~~~r~v~iaaST--H-~GEeei~l~~~~~l~~~---------------------------~~~~ll 263 (419)
T COG1519 227 -------------LGGHRPVWVAAST--H-EGEEEIILDAHQALKKQ---------------------------FPNLLL 263 (419)
T ss_pred -------------cCCCCceEEEecC--C-CchHHHHHHHHHHHHhh---------------------------CCCceE
Confidence 2222664444433 2 23446789999999987 999999
Q ss_pred EEEecCCCh-HHHHHHHHHcCCCcEEEecC-CC----------CcchHHHHHHcCCEEEEcc-c-CCCCCCCcHHHHHHH
Q 011690 326 IITGKGPDK-ESYEEKIRRLRLKRVAFRTM-WL----------SAEDYPLLLGSADLGVCLH-T-SSSGLDLPMKVVDMF 391 (479)
Q Consensus 326 ~IvG~G~~~-~~l~~~~~~~~l~~V~f~G~-~~----------~~~~~~~~l~~adi~v~p~-~-~s~~e~~p~~llEam 391 (479)
++|=.-|++ ..+++.+++.|++-..+-.. +. +--++..+|+.||+.++-- . ...|. -++|+.
T Consensus 264 IlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGH----N~LEpa 339 (419)
T COG1519 264 ILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGH----NPLEPA 339 (419)
T ss_pred EEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCC----ChhhHH
Confidence 999977655 56777888877643322211 00 1448999999999988631 0 11333 569999
Q ss_pred hCCCcEEEec----CccchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 392 GCGLPVCAVS----YSCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 392 a~G~PVIas~----~~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
++|+|||.-. ...+.+-+.+...|+.+++.+.+++.+..++. |++.++++++++.+.
T Consensus 340 ~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~~~~l~~~v~~l~~----~~~~r~~~~~~~~~~ 400 (419)
T COG1519 340 AFGTPVIFGPYTFNFSDIAERLLQAGAGLQVEDADLLAKAVELLLA----DEDKREAYGRAGLEF 400 (419)
T ss_pred HcCCCEEeCCccccHHHHHHHHHhcCCeEEECCHHHHHHHHHHhcC----CHHHHHHHHHHHHHH
Confidence 9999999874 44455566677789999888888888888877 689999999888874
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.11 E-value=3e-09 Score=112.77 Aligned_cols=123 Identities=12% Similarity=0.183 Sum_probs=99.6
Q ss_pred HHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC-hHHHHHHHHHcCCCc-EEEecCCCC
Q 011690 280 GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKIRRLRLKR-VAFRTMWLS 357 (479)
Q Consensus 280 ~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~-~~~l~~~~~~~~l~~-V~f~G~~~~ 357 (479)
...|+++..+.++ .|+++|.| |.|.. .+.++++ .++ +| +.|.| ..
T Consensus 291 s~~I~~i~~Lv~~---------------------------lPd~~f~I-ga~te~s~kL~~L-~~y--~nvvly~~--~~ 337 (438)
T TIGR02919 291 SDQIEHLEEIVQA---------------------------LPDYHFHI-AALTEMSSKLMSL-DKY--DNVKLYPN--IT 337 (438)
T ss_pred HHHHHHHHHHHHh---------------------------CCCcEEEE-EecCcccHHHHHH-Hhc--CCcEEECC--cC
Confidence 8899999999886 99999999 87755 6777777 555 55 55555 45
Q ss_pred cchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc-cchhccccCccEEEe--CCHHHHHHHHHHHHhc
Q 011690 358 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNGLLF--SSSSELADQLLMLFKG 434 (479)
Q Consensus 358 ~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~-~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~ 434 (479)
.+++.++|..||+++.. +.++++++++.||++.|+||++.+.. +..+++.+ |.++ +++++|+++|.+++.+
T Consensus 338 ~~~l~~ly~~~dlyLdi---n~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d 411 (438)
T TIGR02919 338 TQKIQELYQTCDIYLDI---NHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLND 411 (438)
T ss_pred hHHHHHHHHhccEEEEc---cccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcC
Confidence 66899999999999987 78889999999999999999999854 34566644 7777 6799999999999994
Q ss_pred CCCCHHHHHHH
Q 011690 435 FPDDSDVLKKL 445 (479)
Q Consensus 435 ~~~~~~~~~~~ 445 (479)
++.++..
T Consensus 412 ----~~~~~~~ 418 (438)
T TIGR02919 412 ----PNQFREL 418 (438)
T ss_pred ----HHHHHHH
Confidence 6554443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.3e-08 Score=97.70 Aligned_cols=117 Identities=23% Similarity=0.338 Sum_probs=82.2
Q ss_pred CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHH
Q 011690 262 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 341 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~ 341 (479)
+.+.++++.|..... .++++++. .|+..++++|.+.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~-------------------------------~~~~~~~v~g~~~--------- 226 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKA-------------------------------LPDYQFIVFGPNA--------- 226 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHh-------------------------------CCCCeEEEEcCCc---------
Confidence 345688888887654 55666554 5678888887652
Q ss_pred HHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccc------hhccccCccE
Q 011690 342 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI------EELVKVDKNG 415 (479)
Q Consensus 342 ~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~------~e~i~~~~~G 415 (479)
.+...+||.+.+. +.+++.+++++||++|.- .| . +++.|++++|+|++.....+. .+.++....|
T Consensus 227 ~~~~~~ni~~~~~--~~~~~~~~m~~ad~vIs~----~G--~-~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~ 297 (318)
T PF13528_consen 227 ADPRPGNIHVRPF--STPDFAELMAAADLVISK----GG--Y-TTISEALALGKPALVIPRPGQDEQEYNARKLEELGLG 297 (318)
T ss_pred ccccCCCEEEeec--ChHHHHHHHHhCCEEEEC----CC--H-HHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCe
Confidence 1111478999886 348999999999999963 33 2 269999999999999986542 3455555667
Q ss_pred EEeC----CHHHHHHHHHHH
Q 011690 416 LLFS----SSSELADQLLML 431 (479)
Q Consensus 416 ~l~~----~~~~la~~l~~l 431 (479)
...+ +++.|++.|.++
T Consensus 298 ~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 298 IVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred EEcccccCCHHHHHHHHhcC
Confidence 6653 477888877653
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.6e-08 Score=89.56 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=81.5
Q ss_pred ChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 011690 18 SPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCV 97 (479)
Q Consensus 18 ~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~ 97 (479)
++-+..++..|.++ |++|+|++..+.. .......++++++++ . +.+....... +..+ ++++.
T Consensus 10 ~~~~~~~~~~L~~~-g~~V~ii~~~~~~--~~~~~~~~i~~~~~~--~-~~k~~~~~~~-~~~l-----------~k~ik 71 (139)
T PF13477_consen 10 STFIYNLAKELKKR-GYDVHIITPRNDY--EKYEIIEGIKVIRLP--S-PRKSPLNYIK-YFRL-----------RKIIK 71 (139)
T ss_pred HHHHHHHHHHHHHC-CCEEEEEEcCCCc--hhhhHhCCeEEEEec--C-CCCccHHHHH-HHHH-----------HHHhc
Confidence 35677778888886 9999999986543 233446789999997 2 1211111111 1122 22222
Q ss_pred hcCCCcEEEEeCCCCcchHHHHHHHHHhcC-CcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEE
Q 011690 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCL 176 (479)
Q Consensus 98 ~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~-~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi 176 (479)
+ .+||+||+|.+. +....+.+++++.+ +|+|++.|+... .. .....++.+++ ++.+.++||.++
T Consensus 72 ~-~~~DvIh~h~~~--~~~~~~~l~~~~~~~~~~i~~~hg~~~--~~-----~~~~~~~~~~~-----~~~~~k~~~~ii 136 (139)
T PF13477_consen 72 K-EKPDVIHCHTPS--PYGLFAMLAKKLLKNKKVIYTVHGSDF--YN-----SSKKKKLKKFI-----IKFAFKRADKII 136 (139)
T ss_pred c-CCCCEEEEecCC--hHHHHHHHHHHHcCCCCEEEEecCCee--ec-----CCchHHHHHHH-----HHHHHHhCCEEE
Confidence 2 789999999952 22455667777777 999999998642 11 11122244555 778889999999
Q ss_pred EeC
Q 011690 177 CVT 179 (479)
Q Consensus 177 ~vS 179 (479)
+.|
T Consensus 137 ~~~ 139 (139)
T PF13477_consen 137 VQS 139 (139)
T ss_pred EcC
Confidence 875
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.4e-07 Score=95.49 Aligned_cols=76 Identities=18% Similarity=0.185 Sum_probs=58.2
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCccEEEeC---
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS--- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~G~l~~--- 419 (479)
+||.+.+. ++. ..++..||++|. ..| ..++.||+++|+|+|.....+ ..+.+.....|....
T Consensus 288 ~~v~~~~~-~p~---~~ll~~~d~~I~----hgG---~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~ 356 (401)
T cd03784 288 DNVRVVDF-VPH---DWLLPRCAAVVH----HGG---AGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRE 356 (401)
T ss_pred CceEEeCC-CCH---HHHhhhhheeee----cCC---chhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCccc
Confidence 68999995 764 457889999995 222 248999999999999997554 345566666777762
Q ss_pred -CHHHHHHHHHHHHh
Q 011690 420 -SSSELADQLLMLFK 433 (479)
Q Consensus 420 -~~~~la~~l~~l~~ 433 (479)
+++++++++.++++
T Consensus 357 ~~~~~l~~al~~~l~ 371 (401)
T cd03784 357 LTAERLAAALRRLLD 371 (401)
T ss_pred CCHHHHHHHHHHHhC
Confidence 57899999999988
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.9e-07 Score=91.64 Aligned_cols=327 Identities=17% Similarity=0.154 Sum_probs=179.4
Q ss_pred EEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEE-EeecCCCCCCCCCchhHHHHHHHHHHHHH
Q 011690 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIH-TMTQWPTIPRGLPKVLKPVLLLLKPLIQF 88 (479)
Q Consensus 10 ~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 88 (479)
++.|+.++.---.....+|-.+.+ +|..++.++.... ..|++.. .+. .....++....+.+..+++.++++
T Consensus 6 i~AGE~SGDllGa~LikaLk~~~~-~~efvGvgG~~m~-----aeG~~sl~~~~--elsvmGf~EVL~~lp~llk~~~~~ 77 (381)
T COG0763 6 LSAGEASGDLLGAGLIKALKARYP-DVEFVGVGGEKME-----AEGLESLFDME--ELSVMGFVEVLGRLPRLLKIRREL 77 (381)
T ss_pred EEecccchhhHHHHHHHHHHhhCC-CeEEEEeccHHHH-----hccCccccCHH--HHHHhhHHHHHHHHHHHHHHHHHH
Confidence 444665443333444556655534 8999987764322 1221110 011 011111222223333344444442
Q ss_pred HHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHH
Q 011690 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYY 168 (479)
Q Consensus 89 ~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 168 (479)
...+. .++||++++-..|.+...+.-++-+...++|+|.-+- .+.+. ++-.| -..+
T Consensus 78 ~~~i~-----~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---PsVWA---------Wr~~R-------a~~i 133 (381)
T COG0763 78 VRYIL-----ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---PSVWA---------WRPKR-------AVKI 133 (381)
T ss_pred HHHHH-----hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---cceee---------echhh-------HHHH
Confidence 21111 2899998888777776655544433333577664221 12211 11111 1234
Q ss_pred hhcCCEEEEeCHHHHHHHHHhhCCeEEEecCC--CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCccccc
Q 011690 169 GKMANGCLCVTQAMQHELAQNWGIKATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADE 246 (479)
Q Consensus 169 ~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
.+.+|+++++=+...+++.+. |.+++.|-+. +...+.+.. ...+.+
T Consensus 134 ~~~~D~lLailPFE~~~y~k~-g~~~~yVGHpl~d~i~~~~~r----~~ar~~--------------------------- 181 (381)
T COG0763 134 AKYVDHLLAILPFEPAFYDKF-GLPCTYVGHPLADEIPLLPDR----EAAREK--------------------------- 181 (381)
T ss_pred HHHhhHeeeecCCCHHHHHhc-CCCeEEeCChhhhhccccccH----HHHHHH---------------------------
Confidence 467899999999999877665 8887777665 322233332 222222
Q ss_pred chhccccccccccCCCCCeEEEEEecCC--CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEE
Q 011690 247 TIFTSLAGIDVFLKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 324 (479)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~--~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 324 (479)
+++..+++.+.+..|+=. -.+....+.+|+..+.++ +|+++
T Consensus 182 ----------l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~---------------------------~~~~~ 224 (381)
T COG0763 182 ----------LGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKAR---------------------------YPDLK 224 (381)
T ss_pred ----------hCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhh---------------------------CCCce
Confidence 345566676777776422 245667788888888876 99999
Q ss_pred EEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe-cCc
Q 011690 325 FIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYS 403 (479)
Q Consensus 325 l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas-~~~ 403 (479)
+++-=-.+..+.++....+........ ++...+-.+.+.+||+.+.. + |++.+|+|.+|+|.|.+ ...
T Consensus 225 ~vlp~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~~~aD~al~a----S----GT~tLE~aL~g~P~Vv~Yk~~ 293 (381)
T COG0763 225 FVLPLVNAKYRRIIEEALKWEVAGLSL---ILIDGEKRKAFAAADAALAA----S----GTATLEAALAGTPMVVAYKVK 293 (381)
T ss_pred EEEecCcHHHHHHHHHHhhccccCceE---EecCchHHHHHHHhhHHHHh----c----cHHHHHHHHhCCCEEEEEecc
Confidence 999776554344333333221101222 13356788899999999875 3 34999999999997665 344
Q ss_pred cchhcc-----ccCc-------cE-EEe-----C--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 404 CIEELV-----KVDK-------NG-LLF-----S--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 404 ~~~e~i-----~~~~-------~G-~l~-----~--~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
.+.-.+ +-.. .| .++ + .++.+++++..++.+ .+.++++.+...++
T Consensus 294 ~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~----~~~~~~~~~~~~~l 358 (381)
T COG0763 294 PITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLN----GDRREALKEKFREL 358 (381)
T ss_pred HHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcC----hHhHHHHHHHHHHH
Confidence 432211 0000 01 111 1 378999999999994 55556665555554
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.9e-06 Score=88.56 Aligned_cols=106 Identities=20% Similarity=0.329 Sum_probs=70.4
Q ss_pred EEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc
Q 011690 324 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 403 (479)
Q Consensus 324 ~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~ 403 (479)
.++.+|.+...+.++ ++ .++|.+.+ |++.. +++..||++|+- .|. .++.||+++|+|+|.....
T Consensus 257 ~i~~~g~~~~~~~~~----~~-~~~v~~~~-~~p~~---~ll~~~~~~I~h----gG~---~t~~Eal~~G~P~v~~p~~ 320 (392)
T TIGR01426 257 VVLSVGRGVDPADLG----EL-PPNVEVRQ-WVPQL---EILKKADAFITH----GGM---NSTMEALFNGVPMVAVPQG 320 (392)
T ss_pred EEEEECCCCChhHhc----cC-CCCeEEeC-CCCHH---HHHhhCCEEEEC----CCc---hHHHHHHHhCCCEEecCCc
Confidence 344667665433322 11 26898888 48764 678999999963 231 2799999999999997644
Q ss_pred c----chhccccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 011690 404 C----IEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGT 449 (479)
Q Consensus 404 ~----~~e~i~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~ 449 (479)
+ +.+.+.....|.... +++++++++.++++ +++.++.++.-+
T Consensus 321 ~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~----~~~~~~~~~~l~ 370 (392)
T TIGR01426 321 ADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLS----DPRYAERLRKMR 370 (392)
T ss_pred ccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhc----CHHHHHHHHHHH
Confidence 3 334455656777662 37899999999998 465544444333
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.82 E-value=6.8e-07 Score=89.58 Aligned_cols=99 Identities=19% Similarity=0.205 Sum_probs=74.7
Q ss_pred CeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE-EEEecC-CChHHHHHHH
Q 011690 264 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKG-PDKESYEEKI 341 (479)
Q Consensus 264 ~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-~IvG~G-~~~~~l~~~~ 341 (479)
+.++++.|...+.+....+++++..+. +++.+ +|+|.+ +..+++++.+
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~------------------------------~~~~i~vv~G~~~~~~~~l~~~~ 220 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ------------------------------INISITLVTGSSNPNLDELKKFA 220 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc------------------------------cCceEEEEECCCCcCHHHHHHHH
Confidence 457888888888665667777776532 23332 478876 6677888877
Q ss_pred HHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccc
Q 011690 342 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 405 (479)
Q Consensus 342 ~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~ 405 (479)
+.. ++|.+.+. .+++.+++++||++|++ . |.++.|++++|+|+|+......
T Consensus 221 ~~~--~~i~~~~~---~~~m~~lm~~aDl~Is~----~----G~T~~E~~a~g~P~i~i~~~~n 271 (279)
T TIGR03590 221 KEY--PNIILFID---VENMAELMNEADLAIGA----A----GSTSWERCCLGLPSLAICLAEN 271 (279)
T ss_pred HhC--CCEEEEeC---HHHHHHHHHHCCEEEEC----C----chHHHHHHHcCCCEEEEEeccc
Confidence 653 57999998 89999999999999974 2 2489999999999999876543
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.3e-06 Score=89.02 Aligned_cols=311 Identities=19% Similarity=0.220 Sum_probs=167.3
Q ss_pred EEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEE-EeecCCCCCCCCCchhHHHHHHHHHHHHH
Q 011690 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIH-TMTQWPTIPRGLPKVLKPVLLLLKPLIQF 88 (479)
Q Consensus 10 ~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 88 (479)
++.|+.++.--....+..|.++ .=++.+++.++.... ..|++.. .+. .....++....+.+..+++.+.++
T Consensus 3 i~AGE~SGD~~ga~Li~~Lk~~-~p~~~~~GvGG~~M~-----~~G~~~l~d~~--~lsvmG~~Evl~~l~~~~~~~~~~ 74 (373)
T PF02684_consen 3 ISAGEASGDLHGARLIRALKAR-DPDIEFYGVGGPRMQ-----AAGVESLFDME--ELSVMGFVEVLKKLPKLKRLFRKL 74 (373)
T ss_pred EEeeCccHHHHHHHHHHHHHhh-CCCcEEEEEechHHH-----hCCCceecchH--HhhhccHHHHHHHHHHHHHHHHHH
Confidence 3445554333333445555554 557888887765332 1232211 111 111111222222333333333332
Q ss_pred HHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCc--EEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHH
Q 011690 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEK 166 (479)
Q Consensus 89 ~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~--~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 166 (479)
...+ +..+||+++.-+-|.+..-+ ++.+++ .+.+ +|.-+- ...+. ++-.| -+
T Consensus 75 ~~~~-----~~~~pd~vIlID~pgFNlrl-ak~lk~-~~~~~~viyYI~---PqvWA---------Wr~~R-------~~ 128 (373)
T PF02684_consen 75 VERI-----KEEKPDVVILIDYPGFNLRL-AKKLKK-RGIPIKVIYYIS---PQVWA---------WRPGR-------AK 128 (373)
T ss_pred HHHH-----HHcCCCEEEEeCCCCccHHH-HHHHHH-hCCCceEEEEEC---Cceee---------eCccH-------HH
Confidence 2111 23899988777766555433 333332 3444 544221 11111 01011 12
Q ss_pred HHhhcCCEEEEeCHHHHHHHHHhhCCeEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCccccc
Q 011690 167 YYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADE 246 (479)
Q Consensus 167 ~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
.+.+.+|.++|+=+...+++.+. |.+++.+-|.-.+...+... +....
T Consensus 129 ~i~~~~D~ll~ifPFE~~~y~~~-g~~~~~VGHPl~d~~~~~~~--~~~~~----------------------------- 176 (373)
T PF02684_consen 129 KIKKYVDHLLVIFPFEPEFYKKH-GVPVTYVGHPLLDEVKPEPD--RAEAR----------------------------- 176 (373)
T ss_pred HHHHHHhheeECCcccHHHHhcc-CCCeEEECCcchhhhccCCC--HHHHH-----------------------------
Confidence 33456899999999988887666 88888887762233322221 11111
Q ss_pred chhccccccccccCCCCCeEEEEEec-CCC-CCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEE
Q 011690 247 TIFTSLAGIDVFLKPNRPALVVSSTS-WTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 324 (479)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~i~~~g~-~~~-~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 324 (479)
... +.++++++.+..|+ -.+ .+....+++++..+.++ +|+++
T Consensus 177 --------~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~---------------------------~p~l~ 220 (373)
T PF02684_consen 177 --------EKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQ---------------------------RPDLQ 220 (373)
T ss_pred --------Hhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHh---------------------------CCCeE
Confidence 112 45677777777663 322 45668889999999886 99999
Q ss_pred EEEEecCCChHH-HHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe-cC
Q 011690 325 FIITGKGPDKES-YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SY 402 (479)
Q Consensus 325 l~IvG~G~~~~~-l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas-~~ 402 (479)
+++..-....+. +++..+..+. ++...-. ..+-.+.+++||+.++. +| ++.+|++.+|+|.|.. ..
T Consensus 221 fvvp~a~~~~~~~i~~~~~~~~~-~~~~~~~---~~~~~~~m~~ad~al~~----SG----TaTLE~Al~g~P~Vv~Yk~ 288 (373)
T PF02684_consen 221 FVVPVAPEVHEELIEEILAEYPP-DVSIVII---EGESYDAMAAADAALAA----SG----TATLEAALLGVPMVVAYKV 288 (373)
T ss_pred EEEecCCHHHHHHHHHHHHhhCC-CCeEEEc---CCchHHHHHhCcchhhc----CC----HHHHHHHHhCCCEEEEEcC
Confidence 998875443333 4555444433 2222221 45677799999999975 33 4999999999996655 44
Q ss_pred ccchh-----ccccCccEE------------Ee---CCHHHHHHHHHHHHhc
Q 011690 403 SCIEE-----LVKVDKNGL------------LF---SSSSELADQLLMLFKG 434 (479)
Q Consensus 403 ~~~~e-----~i~~~~~G~------------l~---~~~~~la~~l~~l~~~ 434 (479)
+.+.. +++..--|+ +. -+++.+++.+..++.+
T Consensus 289 ~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 289 SPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLEN 340 (373)
T ss_pred cHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcC
Confidence 44321 221111111 11 2488999999999994
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.5e-06 Score=96.02 Aligned_cols=188 Identities=16% Similarity=0.068 Sum_probs=128.8
Q ss_pred cCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC-Ch---
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DK--- 334 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~-~~--- 334 (479)
+.++. .+|++++|+..+|+.+.++..+..+.+-+ .+ ... .+.|++.|++. ..
T Consensus 474 ldpd~-ltigfarRfa~YKR~~Lil~dl~rl~~il-------------------~~---~~~-pvQ~IfaGKAhP~d~~g 529 (778)
T cd04299 474 LDPNV-LTIGFARRFATYKRATLLLRDPERLKRLL-------------------ND---PER-PVQFIFAGKAHPADEPG 529 (778)
T ss_pred cCCCc-cEEeeeecchhhhhHHHHHHHHHHHHHHh-------------------hC---CCC-CeEEEEEEecCccchHH
Confidence 34554 38999999999999999999888776420 00 013 49999999884 11
Q ss_pred HHH----HHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhcc
Q 011690 335 ESY----EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELV 409 (479)
Q Consensus 335 ~~l----~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i 409 (479)
..+ .+.+++... .+|.|+-. .+.+--..+++.||+.+.|++. .-|..|+.=.=||..|.+-+++--|...|-.
T Consensus 530 K~iIk~i~~~a~~p~~~~kVvfle~-Yd~~lA~~LvaG~DvwLn~prr-p~EAsGTSgMKA~~NG~LnlSvlDGww~E~~ 607 (778)
T cd04299 530 KELIQEIVEFSRRPEFRGRIVFLED-YDMALARHLVQGVDVWLNTPRR-PLEASGTSGMKAALNGGLNLSVLDGWWDEGY 607 (778)
T ss_pred HHHHHHHHHHHhCcCCCCcEEEEcC-CCHHHHHHHHhhhhhcccCCCC-CCCCCccchHHHHHcCCeeeecccCcccccc
Confidence 223 333332233 47888765 5677778899999999998443 2456666778899999999999999888887
Q ss_pred ccCccEEEeCC--------------HHHHHHHHHH-HHhcCCC-----CHHHHHHHHHHHHH-hhhhhchHHHHHHHHHH
Q 011690 410 KVDKNGLLFSS--------------SSELADQLLM-LFKGFPD-----DSDVLKKLRNGTLE-MGLSARWATEWEEHAKP 468 (479)
Q Consensus 410 ~~~~~G~l~~~--------------~~~la~~l~~-l~~~~~~-----~~~~~~~~~~~~~~-~~~~~~w~~~~~~~~~~ 468 (479)
++.||+.+++ +++|.+.|++ ++-.|-+ .+..+.+|.+++.. ....++|+.+-++.+.+
T Consensus 608 -~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 608 -DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred -CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 7899999943 4467777754 3312211 25556666655554 23467888887777777
Q ss_pred HHHHH
Q 011690 469 LITEV 473 (479)
Q Consensus 469 ~~~~~ 473 (479)
++...
T Consensus 687 ~Y~p~ 691 (778)
T cd04299 687 FYLPA 691 (778)
T ss_pred hHHHH
Confidence 76543
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.53 E-value=2e-05 Score=81.53 Aligned_cols=239 Identities=19% Similarity=0.193 Sum_probs=132.6
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCc--hhHHHHHHHhHHHHHHHHhhcCCEEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRS--HFVSIYRCFSVLRIEKYYGKMANGCLC 177 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~e~~~~~~ad~vi~ 177 (479)
.+||+|++++ .....+++.+++...++| |+..|.-- +-+... ...... ...+.+.|+..++
T Consensus 66 ~~Pd~Vlv~G--D~~~~la~alaA~~~~ip-v~HieaGl------Rs~d~~~g~~de~~--------R~~i~~la~lhf~ 128 (346)
T PF02350_consen 66 EKPDAVLVLG--DRNEALAAALAAFYLNIP-VAHIEAGL------RSGDRTEGMPDEIN--------RHAIDKLAHLHFA 128 (346)
T ss_dssp HT-SEEEEET--TSHHHHHHHHHHHHTT-E-EEEES-----------S-TTSSTTHHHH--------HHHHHHH-SEEEE
T ss_pred cCCCEEEEEc--CCchHHHHHHHHHHhCCC-EEEecCCC------CccccCCCCchhhh--------hhhhhhhhhhhcc
Confidence 7999999998 355566667788899999 55555321 000011 122222 2345678999999
Q ss_pred eCHHHHHHHHHhhCCe---EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 178 VTQAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 178 vS~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
.|+..++.|.+. |.+ +.++-|.-.+.+.. .+. +.. ..+. .
T Consensus 129 ~t~~~~~~L~~~-G~~~~rI~~vG~~~~D~l~~----~~~----~~~-------------------------~~~~---~ 171 (346)
T PF02350_consen 129 PTEEARERLLQE-GEPPERIFVVGNPGIDALLQ----NKE----EIE-------------------------EKYK---N 171 (346)
T ss_dssp SSHHHHHHHHHT-T--GGGEEE---HHHHHHHH----HHH----TTC-------------------------C-HH---H
T ss_pred CCHHHHHHHHhc-CCCCCeEEEEChHHHHHHHH----hHH----HHh-------------------------hhhh---h
Confidence 999999999887 875 55554421010000 000 000 0000 0
Q ss_pred cccccCCCCCeEEEEEecCCC---CCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC
Q 011690 255 IDVFLKPNRPALVVSSTSWTP---DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 331 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~---~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G 331 (479)
..+.....++.++++.=+.+. .+....+.++++.+.+ .+++.+++....
T Consensus 172 ~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~----------------------------~~~~~vi~~~hn 223 (346)
T PF02350_consen 172 SGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAE----------------------------RQNVPVIFPLHN 223 (346)
T ss_dssp HHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHH----------------------------HTTEEEEEE--S
T ss_pred HHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHh----------------------------cCCCcEEEEecC
Confidence 000001344545555433322 2345667777777665 256888887752
Q ss_pred --CChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHH-HHHhCCCcEEEec-Cccchh
Q 011690 332 --PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV-DMFGCGLPVCAVS-YSCIEE 407 (479)
Q Consensus 332 --~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~ll-Eama~G~PVIas~-~~~~~e 407 (479)
.....+.+..+++ ++|.+... ++..++..+++.|+++|. .|+| +. ||.++|+|+|.-. .+.-++
T Consensus 224 ~p~~~~~i~~~l~~~--~~v~~~~~-l~~~~~l~ll~~a~~vvg---dSsG------I~eEa~~lg~P~v~iR~~geRqe 291 (346)
T PF02350_consen 224 NPRGSDIIIEKLKKY--DNVRLIEP-LGYEEYLSLLKNADLVVG---DSSG------IQEEAPSLGKPVVNIRDSGERQE 291 (346)
T ss_dssp -HHHHHHHHHHHTT---TTEEEE-----HHHHHHHHHHESEEEE---SSHH------HHHHGGGGT--EEECSSS-S-HH
T ss_pred CchHHHHHHHHhccc--CCEEEECC-CCHHHHHHHHhcceEEEE---cCcc------HHHHHHHhCCeEEEecCCCCCHH
Confidence 2334444444443 59999998 999999999999999985 2223 45 9999999999994 666778
Q ss_pred ccccCccEEEe-CCHHHHHHHHHHHHh
Q 011690 408 LVKVDKNGLLF-SSSSELADQLLMLFK 433 (479)
Q Consensus 408 ~i~~~~~G~l~-~~~~~la~~l~~l~~ 433 (479)
-+..+.+-+ + .+.+++.+++.++++
T Consensus 292 ~r~~~~nvl-v~~~~~~I~~ai~~~l~ 317 (346)
T PF02350_consen 292 GRERGSNVL-VGTDPEAIIQAIEKALS 317 (346)
T ss_dssp HHHTTSEEE-ETSSHHHHHHHHHHHHH
T ss_pred HHhhcceEE-eCCCHHHHHHHHHHHHh
Confidence 887777666 6 779999999999998
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.52 E-value=5e-05 Score=77.37 Aligned_cols=78 Identities=14% Similarity=0.253 Sum_probs=54.2
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccc------hhccccCccEEEeCC
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI------EELVKVDKNGLLFSS 420 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~------~e~i~~~~~G~l~~~ 420 (479)
+++.+.+. .+ +++.++|..||++|+- .| . .++.|++++|+|++.....+. ...+.+...|...+.
T Consensus 229 ~~v~~~~~-~~-~~~~~~l~~ad~vI~~----~G--~-~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~ 299 (321)
T TIGR00661 229 ENVEIRRI-TT-DNFKELIKNAELVITH----GG--F-SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEY 299 (321)
T ss_pred CCEEEEEC-Ch-HHHHHHHHhCCEEEEC----CC--h-HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcCh
Confidence 68999884 55 7899999999999973 23 1 278999999999999987653 234656667776632
Q ss_pred HH-HHHHHHHHHHh
Q 011690 421 SS-ELADQLLMLFK 433 (479)
Q Consensus 421 ~~-~la~~l~~l~~ 433 (479)
.+ ++.+++...++
T Consensus 300 ~~~~~~~~~~~~~~ 313 (321)
T TIGR00661 300 KELRLLEAILDIRN 313 (321)
T ss_pred hhHHHHHHHHhccc
Confidence 11 44444444444
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.4e-06 Score=90.85 Aligned_cols=180 Identities=12% Similarity=0.095 Sum_probs=113.8
Q ss_pred cccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC
Q 011690 253 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 332 (479)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~ 332 (479)
.|..++++.+. +++.+..++. |=-+..++++..+.++ -|+.+|.+...+.
T Consensus 275 ~R~~~gLp~d~-vvF~~fn~~~--KI~p~~l~~W~~IL~~---------------------------vP~S~L~L~~~~~ 324 (468)
T PF13844_consen 275 TRAQYGLPEDA-VVFGSFNNLF--KISPETLDLWARILKA---------------------------VPNSRLWLLRFPA 324 (468)
T ss_dssp ETGGGT--SSS-EEEEE-S-GG--G--HHHHHHHHHHHHH---------------------------STTEEEEEEETST
T ss_pred CHHHcCCCCCc-eEEEecCccc--cCCHHHHHHHHHHHHh---------------------------CCCcEEEEeeCCH
Confidence 57888998765 3555555554 7778889999888876 8999998876543
Q ss_pred -ChHHHHHHHHHcCC--CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccch---
Q 011690 333 -DKESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE--- 406 (479)
Q Consensus 333 -~~~~l~~~~~~~~l--~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~--- 406 (479)
..+.+++.+++.|+ ++|.|.+. .+.++....++.+|+++=+...+ =+++.+||+.+|+|||+-......
T Consensus 325 ~~~~~l~~~~~~~Gv~~~Ri~f~~~-~~~~ehl~~~~~~DI~LDT~p~n----G~TTt~dALwmGVPvVTl~G~~~~sR~ 399 (468)
T PF13844_consen 325 SGEARLRRRFAAHGVDPDRIIFSPV-APREEHLRRYQLADICLDTFPYN----GGTTTLDALWMGVPVVTLPGETMASRV 399 (468)
T ss_dssp THHHHHHHHHHHTTS-GGGEEEEE----HHHHHHHGGG-SEEE--SSS------SHHHHHHHHHT--EEB---SSGGGSH
T ss_pred HHHHHHHHHHHHcCCChhhEEEcCC-CCHHHHHHHhhhCCEEeeCCCCC----CcHHHHHHHHcCCCEEeccCCCchhHH
Confidence 34678888889999 58999996 88899999999999999763222 245999999999999987533221
Q ss_pred --hcccc-CccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhch-HHHHHHHHHHHHH
Q 011690 407 --ELVKV-DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARW-ATEWEEHAKPLIT 471 (479)
Q Consensus 407 --e~i~~-~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w-~~~~~~~~~~~~~ 471 (479)
.++.. |-.-+++.|.+++.+.-.+|.+ |++.++.+|...++.. .+.-| ...|-+.++..+.
T Consensus 400 ~aSiL~~lGl~ElIA~s~~eYv~~Av~La~----D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~ 465 (468)
T PF13844_consen 400 GASILRALGLPELIADSEEEYVEIAVRLAT----DPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYR 465 (468)
T ss_dssp HHHHHHHHT-GGGB-SSHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHH
T ss_pred HHHHHHHcCCchhcCCCHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 12221 3334566889999999999999 5899999988887532 12222 3344444444443
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.44 E-value=0.00026 Score=76.14 Aligned_cols=150 Identities=15% Similarity=0.137 Sum_probs=92.1
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEec--CC-------ChH
Q 011690 265 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK--GP-------DKE 335 (479)
Q Consensus 265 ~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~--G~-------~~~ 335 (479)
.+|+.+.|++.-||+..=+.|+..+.++ .|....++.|+=++- .. .++
T Consensus 277 ~ii~gvDrld~~kGi~~kl~Afe~fL~~-----------------------~P~~~~kv~liQi~~psr~~~~~y~~~~~ 333 (474)
T PF00982_consen 277 KIIVGVDRLDYTKGIPEKLRAFERFLER-----------------------YPEYRGKVVLIQIAVPSREDVPEYQELRR 333 (474)
T ss_dssp EEEEEE--B-GGG-HHHHHHHHHHHHHH------------------------GGGTTTEEEEEE--B-STTSHHHHHHHH
T ss_pred EEEEEeccchhhcCHHHHHHHHHHHHHh-----------------------CcCccCcEEEEEEeeccCccchhHHHHHH
Confidence 5899999999999999999999988876 111233578876662 11 123
Q ss_pred HHHHHHHHc----CC---CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCc----EEEecCcc
Q 011690 336 SYEEKIRRL----RL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP----VCAVSYSC 404 (479)
Q Consensus 336 ~l~~~~~~~----~l---~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~P----VIas~~~~ 404 (479)
++++.+.+. |- .-|.+...-++.+++..+|+.||+++++ +...|+-++..|+.+|..+ +|.|..+|
T Consensus 334 ~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvT---slrDGmNLva~Eyva~q~~~~GvLiLSefaG 410 (474)
T PF00982_consen 334 EVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVT---SLRDGMNLVAKEYVACQDDNPGVLILSEFAG 410 (474)
T ss_dssp HHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE-----SSBS--HHHHHHHHHS-TS--EEEEETTBG
T ss_pred HHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEec---chhhccCCcceEEEEEecCCCCceEeeccCC
Confidence 344444333 22 2356554348999999999999999997 6666777899999999876 77788777
Q ss_pred chhccccCccEEEeC--CHHHHHHHHHHHHhcCCCCHHHHHHH
Q 011690 405 IEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKL 445 (479)
Q Consensus 405 ~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~~~~~~~~~~~~ 445 (479)
..+.+.+ ..++++ |.+++|++|.+.++. .+++++..
T Consensus 411 aa~~L~~--~al~VNP~d~~~~A~ai~~AL~M---~~~Er~~r 448 (474)
T PF00982_consen 411 AAEQLSE--AALLVNPWDIEEVADAIHEALTM---PPEERKER 448 (474)
T ss_dssp GGGT-TT--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHH
T ss_pred HHHHcCC--ccEEECCCChHHHHHHHHHHHcC---CHHHHHHH
Confidence 7777732 337774 589999999999996 34444433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.8e-05 Score=80.96 Aligned_cols=245 Identities=13% Similarity=0.092 Sum_probs=138.7
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCC--cEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEE
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRS--AFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLC 177 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~--~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 177 (479)
++||++++-+-|.+..- +++.+++ .|+ |+|.-.- .+.+. + +.. | -+.+.+.+|+++|
T Consensus 309 ~kPD~vIlID~PgFNlr-LAK~lkk-~Gi~ipviyYVs---PqVWA--W--R~~-----R-------ikki~k~vD~ll~ 367 (608)
T PRK01021 309 TNPRTVICIDFPDFHFL-LIKKLRK-RGYKGKIVHYVC---PSIWA--W--RPK-----R-------KTILEKYLDLLLL 367 (608)
T ss_pred cCCCEEEEeCCCCCCHH-HHHHHHh-cCCCCCEEEEEC---cccee--e--Ccc-----h-------HHHHHHHhhhhee
Confidence 79999887776655543 3444433 354 7654221 11111 0 000 1 1233456899999
Q ss_pred eCHHHHHHHHHhhCCeEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccccc
Q 011690 178 VTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDV 257 (479)
Q Consensus 178 vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (479)
+=+...+.+.+. |.+++.+-|.-.+...+.. .+.+...+ +
T Consensus 368 IfPFE~~~y~~~-gv~v~yVGHPL~d~i~~~~--~~~~~r~~-------------------------------------l 407 (608)
T PRK01021 368 ILPFEQNLFKDS-PLRTVYLGHPLVETISSFS--PNLSWKEQ-------------------------------------L 407 (608)
T ss_pred cCccCHHHHHhc-CCCeEEECCcHHhhcccCC--CHHHHHHH-------------------------------------c
Confidence 999999888765 9998888776222222111 11222222 2
Q ss_pred ccCCCCCeEEEEEec-CC-CCCCHHHHHHHHH--HhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-C
Q 011690 258 FLKPNRPALVVSSTS-WT-PDEDFGILLEAAL--MYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-P 332 (479)
Q Consensus 258 ~~~~~~~~~i~~~g~-~~-~~K~~~~lieA~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G-~ 332 (479)
+++++++.+.+.-|+ -. -.+..+.+++|++ .+ .++.++++.... .
T Consensus 408 gl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l------------------------------~~~l~fvvp~a~~~ 457 (608)
T PRK01021 408 HLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSL------------------------------ASTHQLLVSSANPK 457 (608)
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHh------------------------------ccCeEEEEecCchh
Confidence 455566766666663 32 2456778888887 33 235788775432 2
Q ss_pred ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe-cCccchh----
Q 011690 333 DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEE---- 407 (479)
Q Consensus 333 ~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas-~~~~~~e---- 407 (479)
..+.+++.+++.+.-.+.+.. .++-.+++++||+.+.. + |++.+|++.+|+|.|.. ..+...-
T Consensus 458 ~~~~i~~~~~~~~~~~~~ii~----~~~~~~~m~aaD~aLaa----S----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak 525 (608)
T PRK01021 458 YDHLILEVLQQEGCLHSHIVP----SQFRYELMRECDCALAK----C----GTIVLETALNQTPTIVTCQLRPFDTFLAK 525 (608)
T ss_pred hHHHHHHHHhhcCCCCeEEec----CcchHHHHHhcCeeeec----C----CHHHHHHHHhCCCEEEEEecCHHHHHHHH
Confidence 345666665443321233332 22236899999999985 3 34999999999997664 4443221
Q ss_pred -ccc-------------cCc--cEEE----eCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 408 -LVK-------------VDK--NGLL----FSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 408 -~i~-------------~~~--~G~l----~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
+++ +.. -=++ --+++.+++.+ +++. |++.++++++...+.
T Consensus 526 ~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~----d~~~r~~~~~~l~~l 585 (608)
T PRK01021 526 YIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILK----TSQSKEKQKDACRDL 585 (608)
T ss_pred HHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhc----CHHHHHHHHHHHHHH
Confidence 111 110 0122 12488899886 7777 466677776665553
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00019 Score=76.83 Aligned_cols=163 Identities=8% Similarity=0.085 Sum_probs=112.6
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCC----CEEEEEEecC-----CC--
Q 011690 265 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP----RLLFIITGKG-----PD-- 333 (479)
Q Consensus 265 ~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~l~IvG~G-----~~-- 333 (479)
.+|+.+-|++.-||+..=++|+..+.++ +| ++.|+-+.-- +.
T Consensus 256 ~lilgVDRLDytKGi~~rl~Afe~fL~~---------------------------~Pe~~gkvvlvQia~psR~~v~~Y~ 308 (474)
T PRK10117 256 QNIFSVERLDYSKGLPERFLAYEALLEK---------------------------YPQHHGKIRYTQIAPTSRGDVQAYQ 308 (474)
T ss_pred eEEEEecccccccCHHHHHHHHHHHHHh---------------------------ChhhcCCEEEEEEcCCCCCccHHHH
Confidence 4899999999999999999999998876 55 4677756521 11
Q ss_pred --hHHHHHHHHHcC-------CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC-----cEEE
Q 011690 334 --KESYEEKIRRLR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-----PVCA 399 (479)
Q Consensus 334 --~~~l~~~~~~~~-------l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~-----PVIa 399 (479)
+.++++.+.+.+ ..-|.+...-++.+++..+|+.||++++. +...|+-.+.-|+.+|.. .+|-
T Consensus 309 ~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVT---plRDGMNLVAkEyva~q~~~~~GvLIL 385 (474)
T PRK10117 309 DIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVT---PLRDGMNLVAKEYVAAQDPANPGVLVL 385 (474)
T ss_pred HHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEec---ccccccccccchheeeecCCCCccEEE
Confidence 223333444432 12366665558999999999999999987 444455559999999976 3888
Q ss_pred ecCccchhccccCccEEEeC--CHHHHHHHHHHHHhcCCCCHHHHHH----HHHHHHHhhhhhchHHHHHH
Q 011690 400 VSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKK----LRNGTLEMGLSARWATEWEE 464 (479)
Q Consensus 400 s~~~~~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~w~~~~~~ 464 (479)
|..+|.++.+. ..++++ |.+++|++|.+.+.. ..++++. |++.... .....|.+..-.
T Consensus 386 SefAGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~M---p~~Er~~R~~~l~~~v~~-~dv~~W~~~fL~ 449 (474)
T PRK10117 386 SQFAGAANELT---SALIVNPYDRDEVAAALDRALTM---PLAERISRHAEMLDVIVK-NDINHWQECFIS 449 (474)
T ss_pred ecccchHHHhC---CCeEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHhhh-CCHHHHHHHHHH
Confidence 88888777773 367774 699999999999996 3344333 2333333 235556555433
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.4e-05 Score=79.00 Aligned_cols=120 Identities=20% Similarity=0.311 Sum_probs=93.9
Q ss_pred CcEEEecCCCCc-chHHHHHHcCCEEEEcccCCC---CCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEeCCHH
Q 011690 347 KRVAFRTMWLSA-EDYPLLLGSADLGVCLHTSSS---GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS 422 (479)
Q Consensus 347 ~~V~f~G~~~~~-~~~~~~l~~adi~v~p~~~s~---~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~~~~~ 422 (479)
+++...|. ++. ..++..++..|+.+.-+..+. +.++++.++|+|+||.|.+++...+..-.+.+|+.-++..|.+
T Consensus 237 ~~~~yIg~-~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~d~k 315 (373)
T COG4641 237 PNVQYIGY-YNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQDSK 315 (373)
T ss_pred chhhhhhc-cCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEecCHH
Confidence 57888886 555 899999999999887544442 2224789999999999999999999999999999988889999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHH
Q 011690 423 ELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 474 (479)
Q Consensus 423 ~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 474 (479)
++.+++..++.+ ++.++++.+.+.+.. ..+ .+.++-+.++++++.
T Consensus 316 dl~~~~~yll~h----~~erkeiae~~ye~V-~~~--ht~~~r~~~~~~~i~ 360 (373)
T COG4641 316 DLKEKLKYLLNH----PDERKEIAECAYERV-LAR--HTYEERIFKLLNEIA 360 (373)
T ss_pred HHHHHHHHHhcC----cchHHHHHHhhHHHH-HHh--ccHHHHHHHHHHHHH
Confidence 999999999995 788999998888732 222 344444555555544
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.35 E-value=0.00014 Score=74.97 Aligned_cols=258 Identities=18% Similarity=0.191 Sum_probs=161.0
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+|.+|+ ...+.+++.+++++.++|+- |--+ +++-+...+-..+. .+.....|+..++.|
T Consensus 91 ~kPD~VlVhG--DT~t~lA~alaa~~~~IpV~---HvEA----GlRt~~~~~PEE~N--------R~l~~~~S~~hfapt 153 (383)
T COG0381 91 EKPDLVLVHG--DTNTTLAGALAAFYLKIPVG---HVEA----GLRTGDLYFPEEIN--------RRLTSHLSDLHFAPT 153 (383)
T ss_pred hCCCEEEEeC--CcchHHHHHHHHHHhCCceE---EEec----ccccCCCCCcHHHH--------HHHHHHhhhhhcCCh
Confidence 8999999998 45566666788888898864 3211 01111111000111 234556799999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 256 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
+..++.|.+. |.+ +.++-|...+.............. .. ..
T Consensus 154 e~ar~nLl~E-G~~~~~IfvtGnt~iDal~~~~~~~~~~~~-------------------------------~~----~~ 197 (383)
T COG0381 154 EIARKNLLRE-GVPEKRIFVTGNTVIDALLNTRDRVLEDSK-------------------------------IL----AK 197 (383)
T ss_pred HHHHHHHHHc-CCCccceEEeCChHHHHHHHHHhhhccchh-------------------------------hH----Hh
Confidence 9999998877 665 666666522211111000000000 00 00
Q ss_pred cccCCCCCeEEEEEecCCC-CCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChH
Q 011690 257 VFLKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 335 (479)
Q Consensus 257 ~~~~~~~~~~i~~~g~~~~-~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~ 335 (479)
+....++..++++.=|-+- .+++..+++|+..+.++ +|+..++.-=. .+.
T Consensus 198 ~~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~---------------------------~~~~~viyp~H--~~~ 248 (383)
T COG0381 198 GLDDKDKKYILVTAHRRENVGEPLEEICEALREIAEE---------------------------YPDVIVIYPVH--PRP 248 (383)
T ss_pred hhccccCcEEEEEcchhhcccccHHHHHHHHHHHHHh---------------------------CCCceEEEeCC--CCh
Confidence 0011233345555444333 38899999999998886 67666655432 224
Q ss_pred HHHHHH-HHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-CccchhccccC
Q 011690 336 SYEEKI-RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVD 412 (479)
Q Consensus 336 ~l~~~~-~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~~~e~i~~~ 412 (479)
.+++.. +.++- ++|.+..+ +...++..++..|-+.+. .|.| -.=||-..|+||+.-. ...-+|-++.|
T Consensus 249 ~v~e~~~~~L~~~~~v~li~p-l~~~~f~~L~~~a~~ilt---DSGg-----iqEEAp~lg~Pvl~lR~~TERPE~v~ag 319 (383)
T COG0381 249 RVRELVLKRLKNVERVKLIDP-LGYLDFHNLMKNAFLILT---DSGG-----IQEEAPSLGKPVLVLRDTTERPEGVEAG 319 (383)
T ss_pred hhhHHHHHHhCCCCcEEEeCC-cchHHHHHHHHhceEEEe---cCCc-----hhhhHHhcCCcEEeeccCCCCccceecC
Confidence 455555 44444 58999998 999999999999976663 3444 4679999999999886 66678877554
Q ss_pred ccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 413 KNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 413 ~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+-.++ .+.+.+.+++..+++ +++.+++|++..--++
T Consensus 320 -t~~lvg~~~~~i~~~~~~ll~----~~~~~~~m~~~~npYg 356 (383)
T COG0381 320 -TNILVGTDEENILDAATELLE----DEEFYERMSNAKNPYG 356 (383)
T ss_pred -ceEEeCccHHHHHHHHHHHhh----ChHHHHHHhcccCCCc
Confidence 44555 568899999999999 5888888877655433
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00028 Score=75.60 Aligned_cols=182 Identities=13% Similarity=0.106 Sum_probs=122.6
Q ss_pred ccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh-
Q 011690 256 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK- 334 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~- 334 (479)
.++++++. +++.+.+ ...|-.+.+..-+.++.+. -|+-.|.+-|.|++.
T Consensus 423 ~lglp~~a-vVf~c~~--n~~K~~pev~~~wmqIL~~---------------------------vP~Svl~L~~~~~~~~ 472 (620)
T COG3914 423 QLGLPEDA-VVFCCFN--NYFKITPEVFALWMQILSA---------------------------VPNSVLLLKAGGDDAE 472 (620)
T ss_pred hcCCCCCe-EEEEecC--CcccCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCCcHH
Confidence 34676554 2343433 3447778888887777665 899999999987543
Q ss_pred --HHHHHHHHHcCC--CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccch----
Q 011690 335 --ESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE---- 406 (479)
Q Consensus 335 --~~l~~~~~~~~l--~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~---- 406 (479)
..+++.+++.|+ +++.|.++ .+.++..+.|+-||+++=. ...+=.++.+|++-||+||++-....+.
T Consensus 473 ~~~~l~~la~~~Gv~~eRL~f~p~-~~~~~h~a~~~iADlvLDT----yPY~g~TTa~daLwm~vPVlT~~G~~FasR~~ 547 (620)
T COG3914 473 INARLRDLAEREGVDSERLRFLPP-APNEDHRARYGIADLVLDT----YPYGGHTTASDALWMGVPVLTRVGEQFASRNG 547 (620)
T ss_pred HHHHHHHHHHHcCCChhheeecCC-CCCHHHHHhhchhheeeec----ccCCCccchHHHHHhcCceeeeccHHHHHhhh
Confidence 567888899898 68999998 9999999999999999964 2222345899999999999986433321
Q ss_pred -hccc-cCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhch-HHHHHHHHHHHHHHHHhh
Q 011690 407 -ELVK-VDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARW-ATEWEEHAKPLITEVISQ 476 (479)
Q Consensus 407 -e~i~-~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w-~~~~~~~~~~~~~~~~~~ 476 (479)
.++. -|..-+++.|.++..+.-..+-+ |...+++.|....... .+--| ...+-+.++.++.+..++
T Consensus 548 ~si~~~agi~e~vA~s~~dYV~~av~~g~----dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 548 ASIATNAGIPELVADSRADYVEKAVAFGS----DRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHHHHhcCCchhhcCCHHHHHHHHHHhcc----cHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 2222 24445556777777766666666 4666666665443322 11123 345556677777776665
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00072 Score=77.59 Aligned_cols=166 Identities=8% Similarity=0.034 Sum_probs=111.4
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCC----EEEEEEe-----cCCChH
Q 011690 265 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITG-----KGPDKE 335 (479)
Q Consensus 265 ~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~l~IvG-----~G~~~~ 335 (479)
.+|+.+.|++.-||+..=+.|+..+.++ +|+ +.|+-+. ++++.+
T Consensus 340 ~~ilgVDrlD~~KGi~~kl~A~e~~L~~---------------------------~P~~~gkvvlvQia~psr~~~~~y~ 392 (854)
T PLN02205 340 IMLLGVDDMDIFKGISLKLLAMEQLLMQ---------------------------HPEWQGKVVLVQIANPARGKGKDVK 392 (854)
T ss_pred EEEEEccCcccccCHHHHHHHHHHHHHh---------------------------CccccCCEEEEEEecCCCcccHHHH
Confidence 5899999999999999999999998876 664 4676555 233333
Q ss_pred HHH----HHHHHc----C---CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC---------
Q 011690 336 SYE----EKIRRL----R---LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL--------- 395 (479)
Q Consensus 336 ~l~----~~~~~~----~---l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~--------- 395 (479)
+++ +.+.+. | ..-|.+...-++.+++..+|+.||++++. +...|+-.+..|+.+|..
T Consensus 393 ~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT---~lRDGMNLva~Eyia~~~~~~~~~~~~ 469 (854)
T PLN02205 393 EVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVT---AVRDGMNLIPYEYIISRQGNEKLDKLL 469 (854)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEec---cccccccccchheeEEccCcccccccc
Confidence 333 333332 2 23477775448999999999999999997 544555569999999864
Q ss_pred ----------cEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHH----HHHHHHHhhhhhchH
Q 011690 396 ----------PVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKK----LRNGTLEMGLSARWA 459 (479)
Q Consensus 396 ----------PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~w~ 459 (479)
.+|.|...|.+..+. ..+++ -|.+++|++|.+.++. ..++++. +.+.... .....|.
T Consensus 470 ~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~m---~~~Er~~R~~~~~~~v~~-~d~~~W~ 542 (854)
T PLN02205 470 GLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALEM---AEPEKQLRHEKHYRYVST-HDVGYWA 542 (854)
T ss_pred ccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHhh-CCHHHHH
Confidence 367777666555552 36777 4599999999999996 2333322 2333332 2356676
Q ss_pred HHHHHHHH
Q 011690 460 TEWEEHAK 467 (479)
Q Consensus 460 ~~~~~~~~ 467 (479)
+..-.-+.
T Consensus 543 ~~fl~~l~ 550 (854)
T PLN02205 543 RSFLQDLE 550 (854)
T ss_pred HHHHHHHH
Confidence 65444333
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.0013 Score=70.34 Aligned_cols=169 Identities=15% Similarity=0.143 Sum_probs=116.3
Q ss_pred CeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC--CCh-------
Q 011690 264 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG--PDK------- 334 (479)
Q Consensus 264 ~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G--~~~------- 334 (479)
..+|+.+-|++.-||+..=+.|+..+.++. || ...++.|+-++.. ...
T Consensus 282 ~kiivgvDRlDy~kGi~~rl~Afe~lL~~~----------------Pe-------~~~kvvliQi~~pSr~~v~~y~~~~ 338 (486)
T COG0380 282 KKLIVGVDRLDYSKGIPQRLLAFERLLEEY----------------PE-------WRGKVVLLQIAPPSREDVEEYQALR 338 (486)
T ss_pred ceEEEEehhcccccCcHHHHHHHHHHHHhC----------------hh-------hhCceEEEEecCCCccccHHHHHHH
Confidence 358999999999999999999999998751 11 1234777766633 112
Q ss_pred HHHHHHHHHc----C---CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC----cEEEecCc
Q 011690 335 ESYEEKIRRL----R---LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL----PVCAVSYS 403 (479)
Q Consensus 335 ~~l~~~~~~~----~---l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~----PVIas~~~ 403 (479)
..+++.+.+. | ..-|.|+-.-++.+++..+++.||++++. +...|+-.+..|+.+|-- |.|-|...
T Consensus 339 ~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVt---plrDGMNLvakEyVa~q~~~~G~LiLSeFa 415 (486)
T COG0380 339 LQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVT---PLRDGMNLVAKEYVAAQRDKPGVLILSEFA 415 (486)
T ss_pred HHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeec---cccccccHHHHHHHHhhcCCCCcEEEeccc
Confidence 2233333333 2 23466766558999999999999999986 566677779999999854 78888877
Q ss_pred cchhccccCccEEEeC--CHHHHHHHHHHHHhcCCCCHHHH----HHHHHHHHHhhhhhchHHHHHHH
Q 011690 404 CIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVL----KKLRNGTLEMGLSARWATEWEEH 465 (479)
Q Consensus 404 ~~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~w~~~~~~~ 465 (479)
|.+..+. ..++++ |.+++|++|.+.++. ..+++ ++|.++..+ .....|.....+-
T Consensus 416 Gaa~~L~---~AliVNP~d~~~va~ai~~AL~m---~~eEr~~r~~~~~~~v~~-~d~~~W~~~fl~~ 476 (486)
T COG0380 416 GAASELR---DALIVNPWDTKEVADAIKRALTM---SLEERKERHEKLLKQVLT-HDVARWANSFLDD 476 (486)
T ss_pred cchhhhc---cCEeECCCChHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHH
Confidence 7666663 277774 589999999999996 33333 334444444 3456666654433
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.001 Score=72.42 Aligned_cols=87 Identities=13% Similarity=0.169 Sum_probs=62.6
Q ss_pred CcEEEecCCCCcchHHHHH--HcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCccEEEeC-
Q 011690 347 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l--~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~G~l~~- 419 (479)
+||.+.+ |+|+.+ +| ..++++|. ..| .+ ++.||+.+|+|+|+....+ ....++..+.|...+
T Consensus 346 ~Nv~i~~-w~Pq~~---lL~hp~v~~fIt----HGG--~~-s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~ 414 (507)
T PHA03392 346 ANVLTQK-WFPQRA---VLKHKNVKAFVT----QGG--VQ-STDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDT 414 (507)
T ss_pred CceEEec-CCCHHH---HhcCCCCCEEEe----cCC--cc-cHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEecc
Confidence 7898888 799866 66 45888884 222 22 7899999999999987443 445555667787762
Q ss_pred ---CHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 011690 420 ---SSSELADQLLMLFKGFPDDSDVLKKLRNG 448 (479)
Q Consensus 420 ---~~~~la~~l~~l~~~~~~~~~~~~~~~~~ 448 (479)
+.+++.+++.++++ ++..+++.++-
T Consensus 415 ~~~t~~~l~~ai~~vl~----~~~y~~~a~~l 442 (507)
T PHA03392 415 VTVSAAQLVLAIVDVIE----NPKYRKNLKEL 442 (507)
T ss_pred CCcCHHHHHHHHHHHhC----CHHHHHHHHHH
Confidence 47899999999998 45555444433
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.018 Score=61.66 Aligned_cols=115 Identities=12% Similarity=0.158 Sum_probs=73.0
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcccc-CccEEEeC--
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKV-DKNGLLFS-- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~-~~~G~l~~-- 419 (479)
.++.+.+ |+|+.+ +|+...+..+. +. .|. ++++||+++|+|+|+....+ +...+.. -+.|..+.
T Consensus 311 ~g~~v~~-W~PQ~~---iL~H~~v~~Fv---tH-cG~-nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 381 (442)
T PLN02208 311 RGVVWGG-WVQQPL---ILDHPSIGCFV---NH-CGP-GTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSRE 381 (442)
T ss_pred CCcEeec-cCCHHH---HhcCCccCeEE---cc-CCc-hHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccc
Confidence 4566667 899988 77778775553 22 223 38999999999999986433 3343332 45676662
Q ss_pred -----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhc-hHHHHHHHHHHHHHHHH
Q 011690 420 -----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR-WATEWEEHAKPLITEVI 474 (479)
Q Consensus 420 -----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-w~~~~~~~~~~~~~~~~ 474 (479)
+.+++++++.+++.+ ..+..+++|+++.++..... =..++ +.+..+++++.
T Consensus 382 ~~~~~~~~~l~~ai~~~m~~---~~e~g~~~r~~~~~~~~~~~~~gsS~-~~l~~~v~~l~ 438 (442)
T PLN02208 382 KTGWFSKESLSNAIKSVMDK---DSDLGKLVRSNHTKLKEILVSPGLLT-GYVDKFVEELQ 438 (442)
T ss_pred cCCcCcHHHHHHHHHHHhcC---CchhHHHHHHHHHHHHHHHhcCCcHH-HHHHHHHHHHH
Confidence 568999999999984 23556777777776532211 01122 34566666553
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00091 Score=68.84 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=48.5
Q ss_pred EEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc---cchhccccCccEEEe--CCHHH
Q 011690 349 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS---CIEELVKVDKNGLLF--SSSSE 423 (479)
Q Consensus 349 V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~---~~~e~i~~~~~G~l~--~~~~~ 423 (479)
+.+... .-+..+++..||++|. .| ++-..||..+|+|.|.+..| +..+.+. +.|+++ .++++
T Consensus 233 ~~i~~~---~vd~~~Ll~~a~l~Ig-----~g---gTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~e 299 (335)
T PF04007_consen 233 VIIPPE---PVDGLDLLYYADLVIG-----GG---GTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDE 299 (335)
T ss_pred ccccCC---CCCHHHHHHhcCEEEe-----CC---cHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHH
Confidence 444443 4466689999999994 22 34789999999999987543 3334442 336666 67888
Q ss_pred HHHHHHHHHh
Q 011690 424 LADQLLMLFK 433 (479)
Q Consensus 424 la~~l~~l~~ 433 (479)
+.+.+.+...
T Consensus 300 i~~~v~~~~~ 309 (335)
T PF04007_consen 300 IVEYVRKNLG 309 (335)
T ss_pred HHHHHHHhhh
Confidence 8885555444
|
They are found in archaea and some bacteria and have no known function. |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.001 Score=67.02 Aligned_cols=226 Identities=15% Similarity=0.137 Sum_probs=134.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+.+-+++|+-... .++++.+..+.. +.=+.||-++-++...+ .+...+++..+ .+...++.-++++ +
T Consensus 38 ~r~~rff~HGqFn~-~lwlall~g~~~--~~q~yWhiWGaDLYe~~---~~lk~rlfy~l-----RR~aq~rvg~v~a-t 105 (322)
T PRK02797 38 NRAQRFFLHGQFNP-TLWLALLSGKIK--PKQFYWHIWGADLYEES---KGLKFRLFYPL-----RRLAQKRVGHVFA-T 105 (322)
T ss_pred CccceEEEecCCCH-HHHHHHHhCCcC--ccceEEEEEChhhhhcc---cchhHHHHHHH-----HHHHHhhcCeEEE-e
Confidence 67788899984322 223222222121 22446998876655322 23333333333 6667777888888 7
Q ss_pred HHHHHHH-HHhhCCeEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccc
Q 011690 180 QAMQHEL-AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVF 258 (479)
Q Consensus 180 ~~~~~~l-~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (479)
+....++ ++.++.+...+|- |+.....-..... .
T Consensus 106 rGD~~~~a~~~~~v~~~llyf-------pt~m~~~l~~~~~--------------------------------------~ 140 (322)
T PRK02797 106 RGDLSYFAQRHPKVPGSLLYF-------PTRMDPSLNTMAN--------------------------------------D 140 (322)
T ss_pred cchHHHHHHhcCCCCccEEec-------CCcchhhhccccc--------------------------------------c
Confidence 7777775 4556777444432 2211110000000 0
Q ss_pred cCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEE-Eec--C--CC
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGK--G--PD 333 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~I-vG~--G--~~ 333 (479)
-.+..+..|+..-+-+|..++..++++++... ..++++++ .|. | .+
T Consensus 141 ~~~~~~~tIlvGNSgd~SN~Hie~L~~l~~~~-----------------------------~~~v~ii~PlsYp~gn~~Y 191 (322)
T PRK02797 141 RQRAGKMTILVGNSGDRSNRHIEALRALHQQF-----------------------------GDNVKIIVPMGYPANNQAY 191 (322)
T ss_pred ccCCCceEEEEeCCCCCcccHHHHHHHHHHHh-----------------------------CCCeEEEEECCcCCCCHHH
Confidence 11223445555556777788888888776653 55788765 455 3 23
Q ss_pred hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-Cccchhcccc
Q 011690 334 KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKV 411 (479)
Q Consensus 334 ~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~~~e~i~~ 411 (479)
.+++++.++++-- +++..+...++-+|+..+|+.||++++-+.+. .|+| .+.=.+.+|+||+.+. .+-..++.+.
T Consensus 192 i~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQ--QgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e~ 268 (322)
T PRK02797 192 IEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQ--QGIG-TLCLLIQLGKPVVLSRDNPFWQDLTEQ 268 (322)
T ss_pred HHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechh--hHHh-HHHHHHHCCCcEEEecCCchHHHHHhC
Confidence 4555556666533 67777766699999999999999999976554 4466 5777899999999985 6666777655
Q ss_pred Ccc
Q 011690 412 DKN 414 (479)
Q Consensus 412 ~~~ 414 (479)
+..
T Consensus 269 gv~ 271 (322)
T PRK02797 269 GLP 271 (322)
T ss_pred CCe
Confidence 543
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.027 Score=60.58 Aligned_cols=95 Identities=16% Similarity=0.197 Sum_probs=62.3
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccC-ccEEEe---
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLF--- 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~-~~G~l~--- 418 (479)
.++.+.+ |+|+.+ +|+..++..+. +.+ |. .+++||+++|+|+|+-...+ ....+... +.|+-+
T Consensus 323 ~~~~v~~-w~pQ~~---iL~h~~v~~fv---tHg-G~-nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~ 393 (459)
T PLN02448 323 DMGLVVP-WCDQLK---VLCHSSVGGFW---THC-GW-NSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKRE 393 (459)
T ss_pred CCEEEec-cCCHHH---HhccCccceEE---ecC-ch-hHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecc
Confidence 4677777 899887 66677774432 211 22 28999999999999987443 33444332 445554
Q ss_pred ------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 419 ------SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 419 ------~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
-+.+++++++.+++.+ ..++.+.+|+++.+++
T Consensus 394 ~~~~~~~~~~~l~~av~~vl~~---~~~~~~~~r~~a~~~~ 431 (459)
T PLN02448 394 VGEETLVGREEIAELVKRFMDL---ESEEGKEMRRRAKELQ 431 (459)
T ss_pred cccCCcCcHHHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Confidence 1468999999999984 1245566776666543
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00038 Score=72.16 Aligned_cols=220 Identities=13% Similarity=0.206 Sum_probs=104.0
Q ss_pred HhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCC-C
Q 011690 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-P 201 (479)
Q Consensus 124 ~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~ 201 (479)
...+.++|-.||+.+..-.+..........+ . -....+..|.+++.|+.+++.+.+.++.+ -.++.-| |
T Consensus 96 ~~~~~~~i~lwHG~~~K~~g~~~~~~~~~~~---~------~~~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~P 166 (369)
T PF04464_consen 96 KRKNQKYIQLWHGIPLKKIGYDSPDNKNYRK---N------YKRNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYP 166 (369)
T ss_dssp --TTSEEEE--SS--SB--GGG-S---TS-H---H------HHHHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--G
T ss_pred cCCCcEEEEecCCCcccccchhccccccchh---h------hhhhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCC
Confidence 3467788889999863221111100000000 1 12334678999999999999999888877 3444455 2
Q ss_pred -CCC-CCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCH
Q 011690 202 -PEF-FHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDF 279 (479)
Q Consensus 202 -~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~ 279 (479)
.+. +.... ..+..+... ++...++. +|++.-.|.....-
T Consensus 167 R~D~l~~~~~-~~~~~i~~~-------------------------------------~~~~~~~k-~ILyaPT~R~~~~~ 207 (369)
T PF04464_consen 167 RNDYLFNKSK-ENRNRIKKK-------------------------------------LGIDKDKK-VILYAPTWRDNSSN 207 (369)
T ss_dssp GGHHHHHSTT--HHHHHHHH-------------------------------------TT--SS-E-EEEEE----GGG--
T ss_pred eEhHHhccCH-HHHHHHHHH-------------------------------------hccCCCCc-EEEEeecccccccc
Confidence 122 22222 122222222 23444554 67776556543332
Q ss_pred ------HHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHH-cCC-CcEEE
Q 011690 280 ------GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR-LRL-KRVAF 351 (479)
Q Consensus 280 ------~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~-~~l-~~V~f 351 (479)
...++.-..... ..+++.+++-..- ........ ... ++|.+
T Consensus 208 ~~~~~~~~~~~~~~l~~~---------------------------~~~~~~li~k~Hp----~~~~~~~~~~~~~~~i~~ 256 (369)
T PF04464_consen 208 EYFKFFFSDLDFEKLNFL---------------------------LKNNYVLIIKPHP----NMKKKFKDFKEDNSNIIF 256 (369)
T ss_dssp GGSS----TT-HHHHHHH---------------------------HTTTEEEEE--SH----HHHTT----TT-TTTEEE
T ss_pred ccccccccccCHHHHHHH---------------------------hCCCcEEEEEeCc----hhhhchhhhhccCCcEEE
Confidence 112221111111 1567888886632 11222221 222 67888
Q ss_pred ecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe--cC-------ccchhccccCccEEEeCCHH
Q 011690 352 RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV--SY-------SCIEELVKVDKNGLLFSSSS 422 (479)
Q Consensus 352 ~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas--~~-------~~~~e~i~~~~~G~l~~~~~ 422 (479)
... .+++.+++..||++|. ..++ .++|++.+++|||.. |. |...+ ..+.-.|-++.+.+
T Consensus 257 ~~~---~~~~~~ll~~aDiLIT---DySS-----i~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~~~~~~ 324 (369)
T PF04464_consen 257 VSD---NEDIYDLLAAADILIT---DYSS-----IIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPIVYNFE 324 (369)
T ss_dssp -TT----S-HHHHHHT-SEEEE---SS-T-----HHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-EESSHH
T ss_pred CCC---CCCHHHHHHhcCEEEE---echh-----HHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCceeCCHH
Confidence 776 6799999999999995 1233 899999999999965 22 11122 23345588889999
Q ss_pred HHHHHHHHHHhc
Q 011690 423 ELADQLLMLFKG 434 (479)
Q Consensus 423 ~la~~l~~l~~~ 434 (479)
+|.++|..++++
T Consensus 325 eL~~~i~~~~~~ 336 (369)
T PF04464_consen 325 ELIEAIENIIEN 336 (369)
T ss_dssp HHHHHHTTHHHH
T ss_pred HHHHHHHhhhhC
Confidence 999999998884
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0017 Score=68.67 Aligned_cols=159 Identities=16% Similarity=0.167 Sum_probs=103.8
Q ss_pred cCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHH
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 338 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~ 338 (479)
...++|.+.++.|+.... ..+++.+..... .-+.++++...+ .+..
T Consensus 233 ~~~d~~~vyvslGt~~~~---~~l~~~~~~a~~----------------------------~l~~~vi~~~~~-~~~~-- 278 (406)
T COG1819 233 IPADRPIVYVSLGTVGNA---VELLAIVLEALA----------------------------DLDVRVIVSLGG-ARDT-- 278 (406)
T ss_pred hcCCCCeEEEEcCCcccH---HHHHHHHHHHHh----------------------------cCCcEEEEeccc-cccc--
Confidence 346678788888877644 444444333322 224667666643 1111
Q ss_pred HHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCc
Q 011690 339 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDK 413 (479)
Q Consensus 339 ~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~ 413 (479)
.-++ .|+...+. +|..+ ++..||++|+. .| .+ ++.|++..|+|+|+-..+. ..+-++.-.
T Consensus 279 ----~~~~p~n~~v~~~-~p~~~---~l~~ad~vI~h----GG--~g-tt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G 343 (406)
T COG1819 279 ----LVNVPDNVIVADY-VPQLE---LLPRADAVIHH----GG--AG-TTSEALYAGVPLVVIPDGADQPLNAERVEELG 343 (406)
T ss_pred ----cccCCCceEEecC-CCHHH---HhhhcCEEEec----CC--cc-hHHHHHHcCCCEEEecCCcchhHHHHHHHHcC
Confidence 1234 68888884 88776 89999999973 23 22 7999999999999886443 557777888
Q ss_pred cEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHh
Q 011690 414 NGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 414 ~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 475 (479)
+|.... +++.+++++.++++ ++..++..++....++... -.+.+++++++...
T Consensus 344 ~G~~l~~~~l~~~~l~~av~~vL~----~~~~~~~~~~~~~~~~~~~-----g~~~~a~~le~~~~ 400 (406)
T COG1819 344 AGIALPFEELTEERLRAAVNEVLA----DDSYRRAAERLAEEFKEED-----GPAKAADLLEEFAR 400 (406)
T ss_pred CceecCcccCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHhhhcc-----cHHHHHHHHHHHHh
Confidence 898773 48899999999999 4665555555444433111 14566777776554
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0075 Score=61.68 Aligned_cols=245 Identities=17% Similarity=0.162 Sum_probs=136.7
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+.+-++.|+-.... ++++.+..+.... =+.||-++-++...+ .+...+++..+ .+...++.-+|++ +
T Consensus 77 ~r~~kff~HGqFn~~-lwlaLl~g~~~~~--k~~WhIWGaDLYe~~---~~~k~rlfy~l-----Rr~aq~rvg~V~a-t 144 (360)
T PF07429_consen 77 DRADKFFLHGQFNPW-LWLALLFGKIKLK--KCYWHIWGADLYEDS---RSLKFRLFYFL-----RRLAQKRVGHVFA-T 144 (360)
T ss_pred CccceEEEeccCcHH-HHHHHHcCCcccc--ceEEEEeCchhhccc---cccchhHHHHH-----HHHHHhhcCeEEE-E
Confidence 788888899843322 2222222222222 335888775554422 12222333323 5555555666654 6
Q ss_pred HHHHHHHHHhhCCe-EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccc
Q 011690 180 QAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVF 258 (479)
Q Consensus 180 ~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (479)
+......++.|+.. ...+|- |+..+....... ..
T Consensus 145 ~GDl~~~~q~~~~~~~~~lyf-------Pt~m~~~~~~~~--------------------------------------~~ 179 (360)
T PF07429_consen 145 RGDLAYFQQRYPRVPASLLYF-------PTRMDPALTLSE--------------------------------------KN 179 (360)
T ss_pred cchHHHHHHHcCCCCceEEEc-------CCCCchhhhccc--------------------------------------cc
Confidence 78888888887543 334432 221111000000 00
Q ss_pred cCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEE-EecCC----C
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGP----D 333 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~I-vG~G~----~ 333 (479)
....++..|+-.-+-++..++-.++++++.. ...++++++ .|.|. +
T Consensus 180 ~~~~~~ltILvGNSgd~sNnHieaL~~L~~~-----------------------------~~~~~kIivPLsYg~~n~~Y 230 (360)
T PF07429_consen 180 KKNKGKLTILVGNSGDPSNNHIEALEALKQQ-----------------------------FGDDVKIIVPLSYGANNQAY 230 (360)
T ss_pred cCCCCceEEEEcCCCCCCccHHHHHHHHHHh-----------------------------cCCCeEEEEECCCCCchHHH
Confidence 1122344555555677778887777777653 245677654 46654 3
Q ss_pred hHHHHHHHHHc-CCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccC
Q 011690 334 KESYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 412 (479)
Q Consensus 334 ~~~l~~~~~~~-~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~ 412 (479)
.+++++.++++ +-+++..+...+|-+|+.++++.||++++.+.+. .|+| .+.=.+.+|+||+-+.....-..+...
T Consensus 231 i~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQ--QgiG-nI~lLl~~G~~v~L~~~np~~~~l~~~ 307 (360)
T PF07429_consen 231 IQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQ--QGIG-NICLLLQLGKKVFLSRDNPFWQDLKEQ 307 (360)
T ss_pred HHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechh--hhHh-HHHHHHHcCCeEEEecCChHHHHHHhC
Confidence 34455555554 3257876653499999999999999999986554 4466 578899999999999765554444333
Q ss_pred ccEEEeC-C---HHHHHHHHHHHHh
Q 011690 413 KNGLLFS-S---SSELADQLLMLFK 433 (479)
Q Consensus 413 ~~G~l~~-~---~~~la~~l~~l~~ 433 (479)
.--+++. | ...+.++=.++..
T Consensus 308 ~ipVlf~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 308 GIPVLFYGDELDEALVREAQRQLAN 332 (360)
T ss_pred CCeEEeccccCCHHHHHHHHHHHhh
Confidence 2233342 2 3445554444444
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0028 Score=64.62 Aligned_cols=101 Identities=22% Similarity=0.350 Sum_probs=65.8
Q ss_pred EEEEEecCCChHHHHHHHHHcC-CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 324 LFIITGKGPDKESYEEKIRRLR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 324 ~l~IvG~G~~~~~l~~~~~~~~-l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
-++|.|.---.+..++...... .++|.+.-+ .+++..++..|++.|.- .|. +++-|-++.|||.+....
T Consensus 253 ~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f---~~~~~~ll~gA~~vVSm----~GY---NTvCeILs~~k~aLivPr 322 (400)
T COG4671 253 WLIVTGPFMPEAQRQKLLASAPKRPHISIFEF---RNDFESLLAGARLVVSM----GGY---NTVCEILSFGKPALIVPR 322 (400)
T ss_pred eEEEeCCCCCHHHHHHHHHhcccCCCeEEEEh---hhhHHHHHHhhheeeec----ccc---hhhhHHHhCCCceEEecc
Confidence 3567775432333333333222 378999999 99999999999999953 222 289999999999888764
Q ss_pred ccch-h-cccc---CccEEE---e-C--CHHHHHHHHHHHHhc
Q 011690 403 SCIE-E-LVKV---DKNGLL---F-S--SSSELADQLLMLFKG 434 (479)
Q Consensus 403 ~~~~-e-~i~~---~~~G~l---~-~--~~~~la~~l~~l~~~ 434 (479)
+... | ++.. .+-|++ . + +++.||++|...+..
T Consensus 323 ~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~ 365 (400)
T COG4671 323 AAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALAR 365 (400)
T ss_pred CCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccC
Confidence 4332 2 2221 122433 3 2 388999999988884
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0099 Score=60.72 Aligned_cols=107 Identities=17% Similarity=0.104 Sum_probs=70.1
Q ss_pred CCCCCeEEEEEec-CCCCCCHH--HHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHH
Q 011690 260 KPNRPALVVSSTS-WTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 336 (479)
Q Consensus 260 ~~~~~~~i~~~g~-~~~~K~~~--~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~ 336 (479)
.++++.+++..|. +.+.|... ...+.++.+.++ +..+++.|...+++.
T Consensus 171 ~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~-----------------------------~~~ivl~G~~~e~~~ 221 (334)
T TIGR02195 171 DTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ-----------------------------GYQVVLFGSAKDHPA 221 (334)
T ss_pred CCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC-----------------------------CCEEEEEEChhhHHH
Confidence 3456667777665 55666544 666666665431 367888886665555
Q ss_pred HHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc
Q 011690 337 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 404 (479)
Q Consensus 337 l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~ 404 (479)
.++..+..+-..+.+.|. .+-.++..+++.||++|.. .+| .+==|-|+|+|+|+--.+.
T Consensus 222 ~~~i~~~~~~~~~~l~g~-~sL~el~ali~~a~l~I~~---DSG-----p~HlAaA~~~P~i~lfG~t 280 (334)
T TIGR02195 222 GNEIEALLPGELRNLAGE-TSLDEAVDLIALAKAVVTN---DSG-----LMHVAAALNRPLVALYGST 280 (334)
T ss_pred HHHHHHhCCcccccCCCC-CCHHHHHHHHHhCCEEEee---CCH-----HHHHHHHcCCCEEEEECCC
Confidence 555443332123557887 8899999999999999975 444 2333669999999874333
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00045 Score=67.98 Aligned_cols=87 Identities=18% Similarity=0.217 Sum_probs=48.8
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhc-------CCcEEEEecCchhhhhh----hh-cCCCc-hh--HHHHHHHhHHHH
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-------RSAFIVDWHNFGYTLLS----LS-LGRRS-HF--VSIYRCFSVLRI 164 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~-------~~~~ii~~h~~~~~~~~----~~-~~~~~-~~--~~~~~~~~~~~~ 164 (479)
.+|||||+|. +.+.++..+++... ++|+++|+|+..|.-.. +. .+-.. .+ .......-..-.
T Consensus 132 ~~pDIIH~hD---W~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~ 208 (245)
T PF08323_consen 132 WKPDIIHCHD---WHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINF 208 (245)
T ss_dssp -S-SEEEEEC---GGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEH
T ss_pred CCCCEEEecC---chHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCH
Confidence 4899999999 77777776766654 59999999997542100 00 00000 00 000000000112
Q ss_pred HHHHhhcCCEEEEeCHHHHHHHHHh
Q 011690 165 EKYYGKMANGCLCVTQAMQHELAQN 189 (479)
Q Consensus 165 e~~~~~~ad~vi~vS~~~~~~l~~~ 189 (479)
.+.-...||.|++||+..++++.+.
T Consensus 209 lk~gi~~AD~v~TVS~~Ya~Ei~~~ 233 (245)
T PF08323_consen 209 LKAGIVYADKVTTVSPTYAREIQTP 233 (245)
T ss_dssp HHHHHHHSSEEEESSHHHHHHTTSH
T ss_pred HHHHHHhcCEeeeCCHHHHHHHhCc
Confidence 3455567999999999999887654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.27 Score=52.78 Aligned_cols=92 Identities=12% Similarity=0.238 Sum_probs=62.2
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccC-ccEEEeC--
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS-- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~-~~G~l~~-- 419 (479)
+++.+.+ |+|+.+ +|+..++..+. +.+ |. ++++||+++|+|+|+-...+ +...+.+. +.|+-+.
T Consensus 317 ~~~~i~~-W~PQ~~---iL~H~~v~~Fv---tHc-Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLK-WSPQLQ---VLSNKAIGCFM---THC-GW-NSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeC-CCCHHH---HhCCCccceEE---ecC-cc-chHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 5688887 899776 78887765553 222 22 38999999999999986333 44455443 4566551
Q ss_pred ------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 420 ------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 420 ------~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
+.+++++++.+++.+ +..+.+|+++.++
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~-----~~~~~~r~~a~~~ 421 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEG-----EKSKEMKENAGKW 421 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcC-----ChHHHHHHHHHHH
Confidence 578999999999984 2235566666554
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.3 Score=52.85 Aligned_cols=91 Identities=16% Similarity=0.235 Sum_probs=56.9
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcccc-CccEEEe---
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKV-DKNGLLF--- 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~-~~~G~l~--- 418 (479)
.++.+.+ |+|+.+ +|+.+++..+. +. .|. ++++||+++|+|+|+....+ ....+.. -+.|+-+
T Consensus 345 ~g~~v~~-w~PQ~~---iL~h~~v~~fv---tH-~G~-nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 415 (482)
T PLN03007 345 KGLIIRG-WAPQVL---ILDHQATGGFV---TH-CGW-NSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAK 415 (482)
T ss_pred CCEEEec-CCCHHH---HhccCccceee---ec-Ccc-hHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccc
Confidence 5788888 899865 78888774443 21 222 38999999999999986433 2222211 1223221
Q ss_pred ---------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 011690 419 ---------SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 451 (479)
Q Consensus 419 ---------~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~ 451 (479)
-+.+++++++.+++.+ + ..+.+|+++.+
T Consensus 416 ~~~~~~~~~~~~~~l~~av~~~m~~----~-~~~~~r~~a~~ 452 (482)
T PLN03007 416 KLVKVKGDFISREKVEKAVREVIVG----E-EAEERRLRAKK 452 (482)
T ss_pred cccccccCcccHHHHHHHHHHHhcC----c-HHHHHHHHHHH
Confidence 2478999999999984 2 23445555544
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.31 Score=52.25 Aligned_cols=103 Identities=12% Similarity=0.253 Sum_probs=67.0
Q ss_pred HHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-c
Q 011690 336 SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-K 410 (479)
Q Consensus 336 ~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~ 410 (479)
.+++.++.. ...+.| |+|+.+ +|+...+..+. +. .|. ++++||+++|+|+|+....+ ....+ +
T Consensus 304 ~f~~r~~~~---g~vv~~-w~PQ~~---vL~h~~v~~fv---tH-~G~-nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~ 371 (446)
T PLN00414 304 GFEERVKGR---GIVWEG-WVEQPL---ILSHPSVGCFV---NH-CGF-GSMWESLVSDCQIVFIPQLADQVLITRLLTE 371 (446)
T ss_pred hHHHHhcCC---CeEEec-cCCHHH---HhcCCccceEE---ec-Cch-hHHHHHHHcCCCEEecCcccchHHHHHHHHH
Confidence 444444432 355567 899988 66666443332 21 222 38999999999999986433 34445 3
Q ss_pred cCccEEEeC-------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 411 VDKNGLLFS-------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 411 ~~~~G~l~~-------~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
.-+.|..+. +.+++++++.+++.+ ..+..+.+|+++.+..
T Consensus 372 ~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~---~~e~g~~~r~~a~~~~ 418 (446)
T PLN00414 372 ELEVSVKVQREDSGWFSKESLRDTVKSVMDK---DSEIGNLVKRNHKKLK 418 (446)
T ss_pred HhCeEEEeccccCCccCHHHHHHHHHHHhcC---ChhhHHHHHHHHHHHH
Confidence 456776662 578999999999974 3356677777777653
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.14 Score=52.87 Aligned_cols=72 Identities=11% Similarity=0.025 Sum_probs=47.2
Q ss_pred CEEEEEEecCCC--hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEE
Q 011690 322 RLLFIITGKGPD--KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 398 (479)
Q Consensus 322 ~~~l~IvG~G~~--~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVI 398 (479)
+..++++|...+ .+..++.++.... ..+.+.|. .+-.++..+++.||++|.. .+| .+==|-|+|+|+|
T Consensus 215 ~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~v~n---DSG-----p~HlAaA~g~P~v 285 (352)
T PRK10422 215 GYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGK-TTFPELGALIDHAQLFIGV---DSA-----PAHIAAAVNTPLI 285 (352)
T ss_pred CCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCC-CCHHHHHHHHHhCCEEEec---CCH-----HHHHHHHcCCCEE
Confidence 467777774322 2223333333222 34667898 8999999999999999975 444 2333568999999
Q ss_pred EecC
Q 011690 399 AVSY 402 (479)
Q Consensus 399 as~~ 402 (479)
+--.
T Consensus 286 ~lfG 289 (352)
T PRK10422 286 CLFG 289 (352)
T ss_pred EEEC
Confidence 8743
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.49 Score=50.50 Aligned_cols=86 Identities=13% Similarity=0.140 Sum_probs=58.1
Q ss_pred CCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc-chhcccc-CccEEEe--C--CHHHHHHHHH
Q 011690 356 LSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-IEELVKV-DKNGLLF--S--SSSELADQLL 429 (479)
Q Consensus 356 ~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~-~~e~i~~-~~~G~l~--~--~~~~la~~l~ 429 (479)
.+..++..++++||++|-. +-. .++=|+++|+|+|+-.+.. ...+++. +-..++. . +.++|.+.+.
T Consensus 316 ~~~~e~~~iIs~~dl~ig~----RlH----a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~ 387 (426)
T PRK10017 316 LNDLEMGKILGACELTVGT----RLH----SAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVA 387 (426)
T ss_pred CChHHHHHHHhhCCEEEEe----cch----HHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHHHHHH
Confidence 4567888999999999963 333 6788999999999987543 2222222 2223333 2 4678999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHh
Q 011690 430 MLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 430 ~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
+++++ .++.+++++++..+.
T Consensus 388 ~~~~~---r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 388 DTLGQ---LPALNARLAEAVSRE 407 (426)
T ss_pred HHHhC---HHHHHHHHHHHHHHH
Confidence 99995 345566666666653
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.21 Score=51.14 Aligned_cols=73 Identities=14% Similarity=0.081 Sum_probs=47.9
Q ss_pred CEEEEEEecCCC-h-HHHHHHHHHcCCC-cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEE
Q 011690 322 RLLFIITGKGPD-K-ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 398 (479)
Q Consensus 322 ~~~l~IvG~G~~-~-~~l~~~~~~~~l~-~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVI 398 (479)
+..+++.|.... . +..++..+..+-. -+.+.|. .+-.++..+++.||++|.. .+| .+==|-|+|+|+|
T Consensus 213 ~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~Vs~---DSG-----p~HlAaA~g~p~v 283 (344)
T TIGR02201 213 GYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGK-LTLPQLAALIDHARLFIGV---DSV-----PMHMAAALGTPLV 283 (344)
T ss_pred CCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCC-CCHHHHHHHHHhCCEEEec---CCH-----HHHHHHHcCCCEE
Confidence 467888884322 2 2233333333322 3567888 8899999999999999975 344 2334668999999
Q ss_pred EecCc
Q 011690 399 AVSYS 403 (479)
Q Consensus 399 as~~~ 403 (479)
+--.+
T Consensus 284 ~Lfgp 288 (344)
T TIGR02201 284 ALFGP 288 (344)
T ss_pred EEECC
Confidence 87433
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.092 Score=53.02 Aligned_cols=276 Identities=16% Similarity=0.103 Sum_probs=143.9
Q ss_pred HHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchh-HHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011690 24 QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVL-KPVLLLLKPLIQFFMLLWFLCVKIASP 102 (479)
Q Consensus 24 ~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~l~~~~~~~ 102 (479)
....|.++ ||+|.|.|....... +..+.-|+....+... +...+. +.+....+.. .+.++.. ..+|
T Consensus 19 lI~elekk-G~ev~iT~rd~~~v~-~LLd~ygf~~~~Igk~-----g~~tl~~Kl~~~~eR~~-----~L~ki~~-~~kp 85 (346)
T COG1817 19 LIWELEKK-GHEVLITCRDFGVVT-ELLDLYGFPYKSIGKH-----GGVTLKEKLLESAERVY-----KLSKIIA-EFKP 85 (346)
T ss_pred HHHHHHhC-CeEEEEEEeecCcHH-HHHHHhCCCeEeeccc-----CCccHHHHHHHHHHHHH-----HHHHHHh-hcCC
Confidence 35677776 999999987665433 4555567777777611 111111 2222111111 1111221 2799
Q ss_pred cEEEE-eCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHH
Q 011690 103 DVFLV-QNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQA 181 (479)
Q Consensus 103 DvI~~-~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~ 181 (479)
|+.+. |||. +. -..+..|+|.|+-..+- .+. .- +++....||.+++.+..
T Consensus 86 dv~i~~~s~~------l~-rvafgLg~psIi~~D~e-hA~----------------~q-----nkl~~Pla~~ii~P~~~ 136 (346)
T COG1817 86 DVAIGKHSPE------LP-RVAFGLGIPSIIFVDNE-HAE----------------AQ-----NKLTLPLADVIITPEAI 136 (346)
T ss_pred ceEeecCCcc------hh-hHHhhcCCceEEecCCh-hHH----------------HH-----hhcchhhhhheeccccc
Confidence 98654 5532 12 23445688887733221 111 01 45666778887766655
Q ss_pred HHHHHHHhhCCe--EEEecCCC-----CCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 182 MQHELAQNWGIK--ATVLYDQP-----PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 182 ~~~~l~~~~~~~--~~vi~n~~-----~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
....+... |.+ -.+-+||. ...|.|.+ +.+.++
T Consensus 137 ~~~~~~~~-G~~p~~i~~~~giae~~~v~~f~pd~-----evlkeL---------------------------------- 176 (346)
T COG1817 137 DEEELLDF-GADPNKISGYNGIAELANVYGFVPDP-----EVLKEL---------------------------------- 176 (346)
T ss_pred chHHHHHh-CCCccceecccceeEEeecccCCCCH-----HHHHHc----------------------------------
Confidence 55555444 655 33446662 12366655 233333
Q ss_pred cccccCCCCCeEEEE-----EecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEe
Q 011690 255 IDVFLKPNRPALVVS-----STSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 329 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~-----~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG 329 (479)
++.++.+.+++= +.-...+++.+.+.++++.+.+ ++ .++|--
T Consensus 177 ---gl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k----------------------------~g--iV~ipr 223 (346)
T COG1817 177 ---GLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK----------------------------YG--IVLIPR 223 (346)
T ss_pred ---CCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh----------------------------Cc--EEEecC
Confidence 455555533332 1123345677778888888765 33 222222
Q ss_pred cCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc---cch
Q 011690 330 KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS---CIE 406 (479)
Q Consensus 330 ~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~---~~~ 406 (479)
.++ .++..+. ..+++..-. ..|-..++--|++++-- | ++-.-||...|+|.|.+.-| +..
T Consensus 224 ~~~----~~eife~--~~n~i~pk~---~vD~l~Llyya~lvig~-----g---gTMarEaAlLGtpaIs~~pGkll~vd 286 (346)
T COG1817 224 EKE----QAEIFEG--YRNIIIPKK---AVDTLSLLYYATLVIGA-----G---GTMAREAALLGTPAISCYPGKLLAVD 286 (346)
T ss_pred chh----HHHHHhh--hccccCCcc---cccHHHHHhhhheeecC-----C---chHHHHHHHhCCceEEecCCcccccc
Confidence 222 2223332 233332222 44545588888998842 2 23568999999999999844 333
Q ss_pred hccccCccEEEeC--CHHHHHHHHHHHHh
Q 011690 407 ELVKVDKNGLLFS--SSSELADQLLMLFK 433 (479)
Q Consensus 407 e~i~~~~~G~l~~--~~~~la~~l~~l~~ 433 (479)
+... +.|.++. |+.+..+...+++.
T Consensus 287 k~li--e~G~~~~s~~~~~~~~~a~~~l~ 313 (346)
T COG1817 287 KYLI--EKGLLYHSTDEIAIVEYAVRNLK 313 (346)
T ss_pred HHHH--hcCceeecCCHHHHHHHHHHHhh
Confidence 4442 3577773 45555555555555
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.06 E-value=2.2e-05 Score=72.08 Aligned_cols=88 Identities=17% Similarity=0.322 Sum_probs=59.2
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc--------chhccccCccEEEe
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--------IEELVKVDKNGLLF 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~--------~~e~i~~~~~G~l~ 418 (479)
.+|.+.++ .+++.++++.||++|+ ..| +.++.|++++|+|.|...... ....+.....|...
T Consensus 55 ~~v~~~~~---~~~m~~~m~~aDlvIs----~aG---~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGF---VDNMAELMAAADLVIS----HAG---AGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECS---SSSHHHHHHHHSEEEE----CS----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEec---hhhHHHHHHHcCEEEe----CCC---ccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 67999998 7789999999999996 222 238999999999988876555 33334444445555
Q ss_pred C----CHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 011690 419 S----SSSELADQLLMLFKGFPDDSDVLKKLRNG 448 (479)
Q Consensus 419 ~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~ 448 (479)
. +++.|.++|..+++ ++..+..+.+.
T Consensus 125 ~~~~~~~~~L~~~i~~l~~----~~~~~~~~~~~ 154 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLS----DPEKLKEMAKA 154 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCC----CHH-SHHHCCC
T ss_pred CcccCCHHHHHHHHHHHHc----CcHHHHHHHHH
Confidence 2 26779999999988 46555555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.085 Score=54.29 Aligned_cols=72 Identities=17% Similarity=0.119 Sum_probs=50.1
Q ss_pred CEEEEEEecCCChHHHHHHHHHcCC---Cc-EEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcE
Q 011690 322 RLLFIITGKGPDKESYEEKIRRLRL---KR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 397 (479)
Q Consensus 322 ~~~l~IvG~G~~~~~l~~~~~~~~l---~~-V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PV 397 (479)
++.++++|...+++..++.++...- .+ +.+.|. .+-.++..+++.||++|.. .+| .+==|-|.|+|+
T Consensus 213 ~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~I~n---DTG-----p~HlAaA~g~P~ 283 (348)
T PRK10916 213 GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGE-TQLEQAVILIAACKAIVTN---DSG-----LMHVAAALNRPL 283 (348)
T ss_pred CCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCC-CCHHHHHHHHHhCCEEEec---CCh-----HHHHHHHhCCCE
Confidence 4678888865555555555444321 12 567787 8899999999999999975 444 233366899999
Q ss_pred EEecC
Q 011690 398 CAVSY 402 (479)
Q Consensus 398 Ias~~ 402 (479)
|+--.
T Consensus 284 valfG 288 (348)
T PRK10916 284 VALYG 288 (348)
T ss_pred EEEEC
Confidence 98643
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0078 Score=62.33 Aligned_cols=92 Identities=13% Similarity=0.085 Sum_probs=59.5
Q ss_pred CeEEEEEecCC--CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHH
Q 011690 264 PALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 341 (479)
Q Consensus 264 ~~~i~~~g~~~--~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~ 341 (479)
+.+.+..|+=. -.+.+..+++|+..+.++ . ..+++.|... .+.+++..
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~---------------------------~--~~~~i~~a~~-~~~i~~~~ 217 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGK---------------------------E--KILVVPSFFK-GKDLKEIY 217 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhc---------------------------C--cEEEEeCCCc-HHHHHHHH
Confidence 55666666532 235566777888877653 2 6788887643 35555544
Q ss_pred HHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec
Q 011690 342 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 401 (479)
Q Consensus 342 ~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~ 401 (479)
.+. ..+.+.+ +..+++++||+.++. +| ++.+|++.+|+|.|...
T Consensus 218 ~~~--~~~~~~~------~~~~~m~~aDlal~~----SG----T~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 218 GDI--SEFEISY------DTHKALLEAEFAFIC----SG----TATLEAALIGTPFVLAY 261 (347)
T ss_pred hcC--CCcEEec------cHHHHHHhhhHHHhc----Cc----HHHHHHHHhCCCEEEEE
Confidence 332 2344432 456899999999974 33 37779999999977654
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.17 Score=52.05 Aligned_cols=103 Identities=22% Similarity=0.222 Sum_probs=71.3
Q ss_pred CCeEEEEEe-cCCCCCCHH--HHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHH
Q 011690 263 RPALVVSST-SWTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 339 (479)
Q Consensus 263 ~~~~i~~~g-~~~~~K~~~--~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~ 339 (479)
+|.++++.| +....|... ...+.+..+.++ . +.+++.|...+.+..++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~---------------------------~--~~Vvl~g~~~e~e~~~~ 225 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAK---------------------------G--YQVVLFGGPDEEERAEE 225 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHC---------------------------C--CEEEEecChHHHHHHHH
Confidence 466777777 666666544 555666666543 3 78889997755555555
Q ss_pred HHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc
Q 011690 340 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 404 (479)
Q Consensus 340 ~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~ 404 (479)
..+... ..+.+.|. .+-+++..+++.||++|.+ .+| .+==|-|.|+|+|+--.+.
T Consensus 226 i~~~~~-~~~~l~~k-~sL~e~~~li~~a~l~I~~---DSg-----~~HlAaA~~~P~I~iyg~t 280 (334)
T COG0859 226 IAKGLP-NAVILAGK-TSLEELAALIAGADLVIGN---DSG-----PMHLAAALGTPTIALYGPT 280 (334)
T ss_pred HHHhcC-CccccCCC-CCHHHHHHHHhcCCEEEcc---CCh-----HHHHHHHcCCCEEEEECCC
Confidence 555543 22338888 8999999999999999976 455 2334678999999986443
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.21 Score=50.56 Aligned_cols=101 Identities=17% Similarity=0.113 Sum_probs=63.9
Q ss_pred CCCeEEEEEecCCCCCCH--HHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh-HHHH
Q 011690 262 NRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYE 338 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~--~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~-~~l~ 338 (479)
+++.+++..|.=.+.|.. +...+.+..+.++ +..++++|.|+.. +..+
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~-----------------------------~~~~vl~~g~~~e~~~~~ 228 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLAR-----------------------------GLQIVLPWGNDAEKQRAE 228 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC-----------------------------CCeEEEeCCCHHHHHHHH
Confidence 345566666643466655 4566666665431 4677777655543 3344
Q ss_pred HHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 339 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 339 ~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
+..+. .++..+.|. .+-.+...+++.||++|.. .+| .+==|-|+|+|+|+--.
T Consensus 229 ~i~~~--~~~~~l~g~-~sL~el~ali~~a~l~I~~---DSg-----p~HlAaa~g~P~i~lfg 281 (319)
T TIGR02193 229 RIAEA--LPGAVVLPK-MSLAEVAALLAGADAVVGV---DTG-----LTHLAAALDKPTVTLYG 281 (319)
T ss_pred HHHhh--CCCCeecCC-CCHHHHHHHHHcCCEEEeC---CCh-----HHHHHHHcCCCEEEEEC
Confidence 43332 334467787 8899999999999999975 444 22335588999998643
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.69 E-value=1.2 Score=47.84 Aligned_cols=79 Identities=13% Similarity=0.175 Sum_probs=55.1
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcccc-CccEEEe--C
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKV-DKNGLLF--S 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~-~~~G~l~--~ 419 (479)
+|+.+.+ |+|+.+ +|+..++..+. +. .|. .+++||+.+|+|+|+....+ ....+.+ -+.|+-+ -
T Consensus 328 ~~~~v~~-w~PQ~~---iL~h~~v~~fv---tH-~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 398 (448)
T PLN02562 328 KQGKVVS-WAPQLE---VLKHQAVGCYL---TH-CGW-NSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGF 398 (448)
T ss_pred cCEEEEe-cCCHHH---HhCCCccceEE---ec-Ccc-hhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCC
Confidence 5777777 899888 67677764443 22 223 38999999999999986433 4444433 3567666 3
Q ss_pred CHHHHHHHHHHHHhc
Q 011690 420 SSSELADQLLMLFKG 434 (479)
Q Consensus 420 ~~~~la~~l~~l~~~ 434 (479)
+.+++++++.+++.+
T Consensus 399 ~~~~l~~~v~~~l~~ 413 (448)
T PLN02562 399 GQKEVEEGLRKVMED 413 (448)
T ss_pred CHHHHHHHHHHHhCC
Confidence 578999999999973
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.037 Score=58.02 Aligned_cols=95 Identities=25% Similarity=0.323 Sum_probs=66.0
Q ss_pred HHHHHHHHcCC-----C--cEEEecCCCC------cchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 336 SYEEKIRRLRL-----K--RVAFRTMWLS------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 336 ~l~~~~~~~~l-----~--~V~f~G~~~~------~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
.+...+++.++ + .|+|...+++ .-|+.++.+.|+++|+| |..|..|-+-.|.-.||+|-|.|+.
T Consensus 456 piL~~iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFP---SYYEPWGYTPAECTVMGiPSvtTNl 532 (692)
T KOG3742|consen 456 PILSSIRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFP---SYYEPWGYTPAECTVMGIPSVTTNL 532 (692)
T ss_pred hHHHHhHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccc---cccCCCCCCchheEEeccccccccc
Confidence 34455666554 2 3566544333 34899999999999999 7778888899999999999999997
Q ss_pred ccc----hhccccCc-cEEEe-----CC----HHHHHHHHHHHHh
Q 011690 403 SCI----EELVKVDK-NGLLF-----SS----SSELADQLLMLFK 433 (479)
Q Consensus 403 ~~~----~e~i~~~~-~G~l~-----~~----~~~la~~l~~l~~ 433 (479)
+|+ +|.|++.. .|+.+ .+ +++|++-|...-+
T Consensus 533 SGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~~ 577 (692)
T KOG3742|consen 533 SGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFCK 577 (692)
T ss_pred cchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHHH
Confidence 774 56665543 36654 23 4556665555544
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.073 Score=57.14 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=62.4
Q ss_pred cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEe----
Q 011690 348 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLF---- 418 (479)
Q Consensus 348 ~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~---- 418 (479)
.+...+ |+|+.+ +|+...+..+. +.+ |. .+++||+.+|+|+|+....+ ....+ +.-..|+-+
T Consensus 318 G~v~~~-W~PQ~~---vL~h~~v~~Fv---tH~-G~-nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~ 388 (453)
T PLN02764 318 GVVWGG-WVQQPL---ILSHPSVGCFV---SHC-GF-GSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE 388 (453)
T ss_pred CcEEeC-CCCHHH---HhcCcccCeEE---ecC-Cc-hHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc
Confidence 355667 899988 56665553332 222 22 28999999999999987444 33444 334566654
Q ss_pred ---CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 419 ---SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 419 ---~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
-+.+++++++.+++.+ ..+..+++|+++.+++
T Consensus 389 ~~~~~~e~i~~av~~vm~~---~~~~g~~~r~~a~~~~ 423 (453)
T PLN02764 389 TGWFSKESLRDAINSVMKR---DSEIGNLVKKNHTKWR 423 (453)
T ss_pred CCccCHHHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Confidence 1578999999999984 2355677777777653
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.099 Score=56.45 Aligned_cols=111 Identities=17% Similarity=0.192 Sum_probs=71.1
Q ss_pred EEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCccEEEeC-----
Q 011690 349 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS----- 419 (479)
Q Consensus 349 V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~G~l~~----- 419 (479)
+.+.+ |+|+.+ +|+..++..+. +. .|. ++++||+++|+|+|+....+ ....+..-+.|+.+.
T Consensus 341 ~vv~~-W~PQ~~---IL~H~~v~~Fv---tH-cGw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~ 411 (472)
T PLN02670 341 MIHVG-WVPQVK---ILSHESVGGFL---TH-CGW-NSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD 411 (472)
T ss_pred eEEeC-cCCHHH---HhcCcccceee---ec-CCc-chHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC
Confidence 66667 899888 67777774443 22 222 38999999999999986333 445555567787762
Q ss_pred ---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHH
Q 011690 420 ---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 473 (479)
Q Consensus 420 ---~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 473 (479)
+.+++++++.+++.+ +..+++|+++.+.....+-...-++++..++..+
T Consensus 412 ~~~~~e~i~~av~~vm~~-----~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l 463 (472)
T PLN02670 412 GSFTSDSVAESVRLAMVD-----DAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYL 463 (472)
T ss_pred CcCcHHHHHHHHHHHhcC-----cchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHH
Confidence 378999999999984 2234566666665433433334444444444443
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.43 E-value=1.1 Score=44.53 Aligned_cols=112 Identities=13% Similarity=0.042 Sum_probs=67.3
Q ss_pred CCCCCeEEEEEecCCCCCCH--HHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHH
Q 011690 260 KPNRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 337 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~K~~--~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l 337 (479)
+..++.+.|.+|.=.+.-.+ +.+.+....+.+-+. ...+.|.+.-.-...+..
T Consensus 158 p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~-------------------------~~g~~~lisfSRRTp~~~ 212 (329)
T COG3660 158 PLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILE-------------------------NQGGSFLISFSRRTPDTV 212 (329)
T ss_pred CCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHH-------------------------hCCceEEEEeecCCcHHH
Confidence 34456677777765443333 344444444443311 235778877766556677
Q ss_pred HHHHHH-cCCCcEEEecC-CCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 338 EEKIRR-LRLKRVAFRTM-WLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 338 ~~~~~~-~~l~~V~f~G~-~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
+..++. ++-.-..+... --..+-+.++|++||.++.. ..|-. -.-||.+.|+||-+--.
T Consensus 213 ~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~T-aDSin-----M~sEAasTgkPv~~~~~ 273 (329)
T COG3660 213 KSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIIST-ADSIN-----MCSEAASTGKPVFILEP 273 (329)
T ss_pred HHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEe-cchhh-----hhHHHhccCCCeEEEec
Confidence 776665 33334555433 01345699999999999975 12222 36899999999977643
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.096 Score=48.84 Aligned_cols=163 Identities=12% Similarity=0.032 Sum_probs=79.5
Q ss_pred CCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCC
Q 011690 32 MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPP 111 (479)
Q Consensus 32 ~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~ 111 (479)
.||+|..+|....... .+||+++++.....+........+.+..-...-......+..|..+-..||+|+.|.-+
T Consensus 2 ~gh~v~fl~~~~~~~~-----~~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H~GW 76 (171)
T PF12000_consen 2 RGHEVVFLTERKRPPI-----PPGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQGFVPDVIIAHPGW 76 (171)
T ss_pred CCCEEEEEecCCCCCC-----CCCcEEEEeCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEcCCc
Confidence 3999999994333222 16999998873111111111111111111111222333444555555689999999832
Q ss_pred CcchHHHHHHHHHh-cCCcEEEEecCchhhhhhhh--cCCC--chhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHHHHHH
Q 011690 112 SVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLS--LGRR--SHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHEL 186 (479)
Q Consensus 112 ~~~~~~~~~~~~~~-~~~~~ii~~h~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l 186 (479)
. - +.+++-. -++|+|.- ..+.|..-+.. +... .......+.-...-..-.-...||..++-|+..++.+
T Consensus 77 G--e---~Lflkdv~P~a~li~Y-~E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~f 150 (171)
T PF12000_consen 77 G--E---TLFLKDVFPDAPLIGY-FEFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQF 150 (171)
T ss_pred c--h---hhhHHHhCCCCcEEEE-EEEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhC
Confidence 1 1 1233433 47887662 11111110000 0000 0111111100000012233346999999999988877
Q ss_pred HHhhCCeEEEecCC-CCCCC
Q 011690 187 AQNWGIKATVLYDQ-PPEFF 205 (479)
Q Consensus 187 ~~~~~~~~~vi~n~-~~~~f 205 (479)
=..+.-++.||++| |++.+
T Consensus 151 P~~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 151 PAEFRSKISVIHDGIDTDRF 170 (171)
T ss_pred CHHHHcCcEEeecccchhhc
Confidence 66666679999999 66544
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.25 Score=53.54 Aligned_cols=94 Identities=17% Similarity=0.250 Sum_probs=62.4
Q ss_pred cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEeC---
Q 011690 348 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS--- 419 (479)
Q Consensus 348 ~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~~--- 419 (479)
.+.+.+ |+|+.+ +|+..++..+. + ..|.. +++||+++|+|+|+-...+ ....+ +.-+.|+.+.
T Consensus 340 g~~v~~-w~PQ~~---iL~h~~vg~fv---t-H~Gwn-S~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~ 410 (480)
T PLN00164 340 GLVWPT-WAPQKE---ILAHAAVGGFV---T-HCGWN-SVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR 410 (480)
T ss_pred CeEEee-cCCHHH---HhcCcccCeEE---e-ecccc-hHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccc
Confidence 366666 798887 77788865443 2 22232 8999999999999986333 33333 4446677652
Q ss_pred ------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 420 ------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 420 ------~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+.+++++++.+++.+ ..++.+.+|+++.+++
T Consensus 411 ~~~~~~~~e~l~~av~~vm~~---~~~~~~~~r~~a~~~~ 447 (480)
T PLN00164 411 KRDNFVEAAELERAVRSLMGG---GEEEGRKAREKAAEMK 447 (480)
T ss_pred ccCCcCcHHHHHHHHHHHhcC---CchhHHHHHHHHHHHH
Confidence 468999999999974 1224566777766654
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.23 Score=53.39 Aligned_cols=141 Identities=13% Similarity=-0.038 Sum_probs=71.6
Q ss_pred cEEEEecCC-----C---CCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHH-HHHHhh-cCCCcE
Q 011690 35 EVDVVAYGG-----S---KPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL-WFLCVK-IASPDV 104 (479)
Q Consensus 35 eV~Vv~~~~-----~---~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~l~~~-~~~~Dv 104 (479)
+|.|+|.-- + ++...+....+.+|.|+|..+... ..++.. ....++.++..+..-. ..+... ..+||+
T Consensus 327 ~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~g-i~~kwi-srf~lWPyLe~fa~d~~~~i~~e~~~~Pdl 404 (550)
T PF00862_consen 327 KIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKG-ILRKWI-SRFDLWPYLEEFADDAEREILAELQGKPDL 404 (550)
T ss_dssp EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTE-EE-S----GGG-GGGHHHHHHHHHHHHHHHHTS--SE
T ss_pred ceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcc-hhhhcc-chhhchhhHHHHHHHHHHHHHHHhCCCCcE
Confidence 388888521 1 122233345689999999543210 011110 0012223333322111 122211 268999
Q ss_pred EEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCH
Q 011690 105 FLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQ 180 (479)
Q Consensus 105 I~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 180 (479)
||.|. ..+..++.+++...|+|...+-|..+-+-+..+--.+..+-..++.-.+.-.|...++.||.||+-|.
T Consensus 405 I~GnY---sDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~ 477 (550)
T PF00862_consen 405 IIGNY---SDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTY 477 (550)
T ss_dssp EEEEH---HHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSH
T ss_pred EEecc---CcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcch
Confidence 99998 77778888888999999999999987332221111122233333333334557788899999998765
|
4.1.13 from EC in the following reaction: |
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.24 Score=53.18 Aligned_cols=79 Identities=14% Similarity=0.257 Sum_probs=56.9
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccc-cCccEEEeC--
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVK-VDKNGLLFS-- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~-~~~~G~l~~-- 419 (479)
.++.+.+ |+|+.+ +|+.+++..+. +.+ |+ ++++||+++|+|+|+....+ ....+. .-+.|+.+.
T Consensus 334 ~g~~v~~-W~PQ~~---iL~H~~v~~Fv---TH~-G~-nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 404 (451)
T PLN03004 334 KGMVVKS-WAPQVP---VLNHKAVGGFV---THC-GW-NSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES 404 (451)
T ss_pred CcEEEEe-eCCHHH---HhCCCccceEe---ccC-cc-hHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC
Confidence 5688878 899988 78889985543 222 22 38999999999999986333 444453 336777662
Q ss_pred -----CHHHHHHHHHHHHhc
Q 011690 420 -----SSSELADQLLMLFKG 434 (479)
Q Consensus 420 -----~~~~la~~l~~l~~~ 434 (479)
+.+++++++.+++.+
T Consensus 405 ~~~~~~~e~l~~av~~vm~~ 424 (451)
T PLN03004 405 ETGFVSSTEVEKRVQEIIGE 424 (451)
T ss_pred cCCccCHHHHHHHHHHHhcC
Confidence 578999999999983
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.14 Score=55.10 Aligned_cols=79 Identities=19% Similarity=0.356 Sum_probs=51.1
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCccEEEeC---
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS--- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~G~l~~--- 419 (479)
+|+.+.. |+|+.+ +|+...+.++- +.| |+ ..+.||+.+|+|+|+-..-+ ....++....|...+
T Consensus 323 ~n~~~~~-W~PQ~~---lL~hp~v~~fi---tHg-G~-~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVK-WLPQND---LLAHPRVKLFI---THG-GL-NSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEES-S--HHH---HHTSTTEEEEE---ES---H-HHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEec-cccchh---hhhcccceeee---ecc-cc-chhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 5787776 899876 57666554432 222 22 48999999999999997433 445566666787773
Q ss_pred -CHHHHHHHHHHHHhc
Q 011690 420 -SSSELADQLLMLFKG 434 (479)
Q Consensus 420 -~~~~la~~l~~l~~~ 434 (479)
+.+++.++|.+++++
T Consensus 394 ~~~~~l~~ai~~vl~~ 409 (500)
T PF00201_consen 394 LTEEELRAAIREVLEN 409 (500)
T ss_dssp -SHHHHHHHHHHHHHS
T ss_pred CcHHHHHHHHHHHHhh
Confidence 378999999999994
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.19 Score=54.34 Aligned_cols=78 Identities=18% Similarity=0.249 Sum_probs=51.3
Q ss_pred cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chh-ccccCccEEEeC---
Q 011690 348 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEE-LVKVDKNGLLFS--- 419 (479)
Q Consensus 348 ~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e-~i~~~~~G~l~~--- 419 (479)
+..+.+ |+|+.+ +|+...+..+. + ..|.. +++||+++|+|+|+-...+ ... +++.-+.|+.+.
T Consensus 341 rg~v~~-w~PQ~~---iL~h~~vg~fv---t-H~G~n-S~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 411 (475)
T PLN02167 341 RGLVCG-WAPQVE---ILAHKAIGGFV---S-HCGWN-SVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDY 411 (475)
T ss_pred Ceeeec-cCCHHH---HhcCcccCeEE---e-eCCcc-cHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccc
Confidence 345566 898887 67665553332 2 12222 7899999999999986333 222 344445676551
Q ss_pred --------CHHHHHHHHHHHHhc
Q 011690 420 --------SSSELADQLLMLFKG 434 (479)
Q Consensus 420 --------~~~~la~~l~~l~~~ 434 (479)
+.+++++++.+++.+
T Consensus 412 ~~~~~~~~~~~~l~~av~~~m~~ 434 (475)
T PLN02167 412 VSAYGEIVKADEIAGAVRSLMDG 434 (475)
T ss_pred ccccCCcccHHHHHHHHHHHhcC
Confidence 467999999999974
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.26 Score=53.04 Aligned_cols=91 Identities=14% Similarity=0.205 Sum_probs=59.3
Q ss_pred cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcccc-CccEEEeC---
Q 011690 348 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKV-DKNGLLFS--- 419 (479)
Q Consensus 348 ~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~-~~~G~l~~--- 419 (479)
+..+.+ |+|+.+ +|+.++++.+. + ..|.. +++||+.+|+|+|+-...+ ....+.+ -+.|+.+.
T Consensus 325 ~g~v~~-w~PQ~~---iL~h~~vg~Fi---t-H~G~n-S~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 395 (456)
T PLN02210 325 QGVVLE-WSPQEK---ILSHMAISCFV---T-HCGWN-STIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA 395 (456)
T ss_pred CeEEEe-cCCHHH---HhcCcCcCeEE---e-eCCcc-cHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc
Confidence 344556 899986 78888754443 2 12232 7899999999999986443 3344443 46777662
Q ss_pred -----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 420 -----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 420 -----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
+.+++++++.+++.+ + ..+++|+++.++
T Consensus 396 ~~~~~~~~~l~~av~~~m~~----~-~g~~~r~~a~~l 428 (456)
T PLN02210 396 VDGELKVEEVERCIEAVTEG----P-AAADIRRRAAEL 428 (456)
T ss_pred cCCcCCHHHHHHHHHHHhcC----c-hHHHHHHHHHHH
Confidence 468999999999974 2 234455555543
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.56 E-value=2.4 Score=43.32 Aligned_cols=75 Identities=20% Similarity=0.162 Sum_probs=53.6
Q ss_pred EEEEEEecCCChHHHHHHHHHcC--CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe
Q 011690 323 LLFIITGKGPDKESYEEKIRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 400 (479)
Q Consensus 323 ~~l~IvG~G~~~~~l~~~~~~~~--l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas 400 (479)
..+.|+..--..++.++..+++- ...+.+... -+.+-+..+|+.||.+++. ..| .+ =+.||.+.|+||-.-
T Consensus 183 ~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~-~~~nPy~~~La~ad~i~VT-~DS----vS-MvsEA~~tG~pV~v~ 255 (311)
T PF06258_consen 183 GSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDG-TGENPYLGFLAAADAIVVT-EDS----VS-MVSEAAATGKPVYVL 255 (311)
T ss_pred CeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecC-CCCCcHHHHHHhCCEEEEc-Ccc----HH-HHHHHHHcCCCEEEe
Confidence 88999987655566666655542 356745444 3555699999999999985 222 22 489999999999888
Q ss_pred cCcc
Q 011690 401 SYSC 404 (479)
Q Consensus 401 ~~~~ 404 (479)
...+
T Consensus 256 ~l~~ 259 (311)
T PF06258_consen 256 PLPG 259 (311)
T ss_pred cCCC
Confidence 7554
|
The function of this family is unknown. |
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.28 Score=52.67 Aligned_cols=92 Identities=14% Similarity=0.266 Sum_probs=60.4
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccC-ccEEEe---
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLF--- 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~-~~G~l~--- 418 (479)
+|....+ |+|+.+ +|+..++..+. + ..|. ++++||+++|+|+|+....+ +...+.+. +.|+-+
T Consensus 324 ~~g~v~~-w~PQ~~---iL~h~~v~~fv---t-H~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVK-WAPQKE---VLSHPAVGGFW---S-HCGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEc-cCCHHH---HhCCCccCeee---e-cCch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 5666666 899988 66666664332 2 1223 38999999999999986433 33444333 577776
Q ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 419 SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 419 ~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
-+.+++++++.+++.+ ++ .+.+++++.++
T Consensus 395 ~~~~~v~~av~~lm~~----~~-~~~~r~~a~~l 423 (451)
T PLN02410 395 LDRGAVERAVKRLMVE----EE-GEEMRKRAISL 423 (451)
T ss_pred ccHHHHHHHHHHHHcC----Cc-HHHHHHHHHHH
Confidence 2478999999999984 22 34455555543
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.38 E-value=5.2 Score=43.54 Aligned_cols=117 Identities=16% Similarity=0.268 Sum_probs=67.9
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEe---
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLF--- 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~--- 418 (479)
.++.+.| |+|+.+ +|+..++..+. + ..|. +.++||+++|+|+|+-...+ ....+ +.-+.|+-+
T Consensus 344 ~g~~v~~-w~pq~~---iL~h~~v~~fv---t-H~G~-ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~ 414 (491)
T PLN02534 344 RGLLIKG-WAPQVL---ILSHPAIGGFL---T-HCGW-NSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVE 414 (491)
T ss_pred CCeeccC-CCCHHH---HhcCCccceEE---e-cCcc-HHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccc
Confidence 4677777 899855 77778875443 2 1222 38999999999999987433 21122 121223322
Q ss_pred --------------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhh--hchH---HHHHHHHHHHHHHHHhh
Q 011690 419 --------------SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS--ARWA---TEWEEHAKPLITEVISQ 476 (479)
Q Consensus 419 --------------~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~w~---~~~~~~~~~~~~~~~~~ 476 (479)
-+.+++++++.+++.+ +.++.+.+|+++.+++.. ..+. .++ +.+..+++++..|
T Consensus 415 ~~~~~~~~~~~~~~v~~eev~~~v~~~m~~---~~eeg~~~R~rA~elk~~a~~Av~~GGSS~-~nl~~fv~~i~~~ 487 (491)
T PLN02534 415 VPVRWGDEERVGVLVKKDEVEKAVKTLMDD---GGEEGERRRRRAQELGVMARKAMELGGSSH-INLSILIQDVLKQ 487 (491)
T ss_pred ccccccccccccCccCHHHHHHHHHHHhcc---ccccHHHHHHHHHHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHH
Confidence 2468999999999962 123345566666654311 1111 123 3456666666655
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=95.37 E-value=3.4 Score=41.38 Aligned_cols=60 Identities=23% Similarity=0.170 Sum_probs=40.6
Q ss_pred CChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 332 PDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 332 ~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
.+.+..++....+.- ..| ... .+.+++..++++||++|. .+-. .++=|+.+|+|+++-+.
T Consensus 217 ~D~~~~~~l~~~~~~~~~i--~~~-~~~~e~~~~i~~~~~vI~----~RlH----~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 217 QDLPLARALRDQLLGPAEV--LSP-LDPEELLGLFASARLVIG----MRLH----ALILAAAAGVPFVALSY 277 (298)
T ss_pred hhHHHHHHHHHhcCCCcEE--Eec-CCHHHHHHHHhhCCEEEE----echH----HHHHHHHcCCCEEEeec
Confidence 344444444444322 233 344 678899999999999985 2333 67899999999998754
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.23 Score=55.84 Aligned_cols=135 Identities=16% Similarity=0.108 Sum_probs=96.1
Q ss_pred CCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-CCh-----
Q 011690 261 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDK----- 334 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G-~~~----- 334 (479)
|+. ++++.+-|+++.|.....+.=+..+.+. |.+ ...|.+.+++.|+- |.-
T Consensus 485 p~~-lfd~~~kRiheYKRq~Lnl~~i~~ly~~-------------------i~~---d~~prv~~iFaGKAhP~y~~aK~ 541 (750)
T COG0058 485 PNA-LFDGQARRIHEYKRQLLNLLDIERLYRI-------------------LKE---DWVPRVQIIFAGKAHPADYAAKE 541 (750)
T ss_pred CCc-ceeeeehhhhhhhhhHHhHhhHHHHHHH-------------------Hhc---CCCCceEEEEeccCCCcchHHHH
Confidence 444 5899999999999877766555444433 111 23677888999974 221
Q ss_pred --HHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccc-
Q 011690 335 --ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK- 410 (479)
Q Consensus 335 --~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~- 410 (479)
..+.+.++..+. .+|.|+.. .+..-...++.+||+-..-++. .-|.-|+.=.=+|..|.+-|+|--|..-|+.+
T Consensus 542 iIk~I~~~a~~in~~lkVvFl~n-YdvslA~~iipa~Dvweqis~a-~~EASGTsnMK~alNGaltigtlDGanvEi~e~ 619 (750)
T COG0058 542 IIKLINDVADVINNKLKVVFLPN-YDVSLAELLIPAADVWEQIPTA-GKEASGTSNMKAALNGALTLGTLDGANVEIYEH 619 (750)
T ss_pred HHHHHHHHHHhhcccceEEEeCC-CChhHHHhhcccccccccCCCC-CccccCcCcchHHhcCCceeeccccHHHHHHHh
Confidence 122333444343 46889887 7788888899999999875444 33455556677899999999999999999997
Q ss_pred -cCccEEEeCC
Q 011690 411 -VDKNGLLFSS 420 (479)
Q Consensus 411 -~~~~G~l~~~ 420 (479)
.+.||+++++
T Consensus 620 vg~~N~~~fG~ 630 (750)
T COG0058 620 VGGENGWIFGE 630 (750)
T ss_pred cCCCceEEeCC
Confidence 8999999954
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.16 Score=50.47 Aligned_cols=76 Identities=25% Similarity=0.193 Sum_probs=54.2
Q ss_pred CEEEEEEecCCChHHHHHHHHHcC-CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe
Q 011690 322 RLLFIITGKGPDKESYEEKIRRLR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 400 (479)
Q Consensus 322 ~~~l~IvG~G~~~~~l~~~~~~~~-l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas 400 (479)
+.++++.|...+.+..++..+..+ .+.+.+.|. .+-.++..+++.||++|.+ .+| .+-=|.++|+|+|+-
T Consensus 153 ~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~-~~l~e~~~li~~~~l~I~~---Dsg-----~~HlA~a~~~p~i~l 223 (279)
T cd03789 153 GARVVLTGGPAERELAEEIAAALGGPRVVNLAGK-TSLRELAALLARADLVVTN---DSG-----PMHLAAALGTPTVAL 223 (279)
T ss_pred CCEEEEEechhhHHHHHHHHHhcCCCccccCcCC-CCHHHHHHHHHhCCEEEee---CCH-----HHHHHHHcCCCEEEE
Confidence 678889987666666666555442 244667787 7889999999999999975 344 344456999999987
Q ss_pred cCccch
Q 011690 401 SYSCIE 406 (479)
Q Consensus 401 ~~~~~~ 406 (479)
-.+..+
T Consensus 224 ~g~~~~ 229 (279)
T cd03789 224 FGPTDP 229 (279)
T ss_pred ECCCCc
Confidence 544443
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.81 Score=49.58 Aligned_cols=91 Identities=19% Similarity=0.239 Sum_probs=59.9
Q ss_pred CcEEEecCCCCcchHHHHHH--cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccC-ccEEEeC
Q 011690 347 KRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~-~~G~l~~ 419 (479)
+++.+.+ |+|+.+ +|+ +..+||. . .|. .+++||+.+|+|+|+....+ ....+.+. +.|+-+.
T Consensus 337 ~~g~v~~-W~PQ~~---iL~H~~v~~Fvt-----H-~G~-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 337 DKGKIVQ-WCPQEK---VLAHPSVACFVT-----H-CGW-NSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CceEEEe-cCCHHH---HhCCCccCeEEe-----c-CCc-chHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 5677777 899877 564 4455552 1 222 28999999999999987433 33434333 5676651
Q ss_pred ---------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 420 ---------SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 420 ---------~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+.+++++++.+++.+ ++.+.+|+++.+++
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm~~-----~~g~~~r~ra~~l~ 443 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEATVG-----EKAAELKQNALKWK 443 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHhcC-----chHHHHHHHHHHHH
Confidence 367999999999974 23456666666653
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.1 Score=43.72 Aligned_cols=84 Identities=14% Similarity=0.120 Sum_probs=58.1
Q ss_pred EEEEec-CCChHHHHHHHHHcCCCcEEE--ecCCCCcch--HHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEE
Q 011690 325 FIITGK-GPDKESYEEKIRRLRLKRVAF--RTMWLSAED--YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 399 (479)
Q Consensus 325 l~IvG~-G~~~~~l~~~~~~~~l~~V~f--~G~~~~~~~--~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIa 399 (479)
++|+|. ......|++.+++.|.+-+.+ .+. ..... ++..+..||++|++...-+....-.+--+|-..|+|++.
T Consensus 2 vliVGG~~~~~~~~~~~~~~~G~~~~~hg~~~~-~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGREDRERRYKRILEKYGGKLIHHGRDGG-DEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCCcccHHHHHHHHHHcCCEEEEEecCCC-CccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 456664 577889999999999876766 233 33444 999999999999973222333233345566778999999
Q ss_pred ecCccchhcc
Q 011690 400 VSYSCIEELV 409 (479)
Q Consensus 400 s~~~~~~e~i 409 (479)
++..+...+.
T Consensus 81 ~~~~~~~~l~ 90 (97)
T PF10087_consen 81 SRSRGVSSLE 90 (97)
T ss_pred ECCCCHHHHH
Confidence 9876665443
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.71 Score=50.00 Aligned_cols=78 Identities=13% Similarity=0.198 Sum_probs=51.5
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----ch-hccccCccEEEeC--
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IE-ELVKVDKNGLLFS-- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~-e~i~~~~~G~l~~-- 419 (479)
+++.+.+ |+|+.+ +|+...+..+. +. .|. .+++||+.+|+|+|+....+ .. .+++.-+.|..+.
T Consensus 342 ~~g~v~~-W~PQ~~---iL~H~~v~~Fv---tH-~G~-nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVIG-WAPQVA---VLAKPAIGGFV---TH-CGW-NSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEEe-eCCHHH---HhCCcccCccc---cc-Ccc-chHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 4666666 899877 66444443332 21 223 38999999999999986433 33 3344445666541
Q ss_pred -------------CHHHHHHHHHHHHh
Q 011690 420 -------------SSSELADQLLMLFK 433 (479)
Q Consensus 420 -------------~~~~la~~l~~l~~ 433 (479)
+.+++++++.+++.
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLME 439 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhc
Confidence 46789999999996
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=94.39 E-value=1.4 Score=47.79 Aligned_cols=78 Identities=19% Similarity=0.288 Sum_probs=50.8
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEe---
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLF--- 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~--- 418 (479)
.++.+.+ |+|+.+ +|+...+.++. +. .|. ++++||+++|+|+|+-...+ +...+ +.-+.|.-.
T Consensus 343 ~g~~v~~-w~PQ~~---vL~h~~v~~fv---tH-~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~ 413 (477)
T PLN02863 343 RGLVIRG-WAPQVA---ILSHRAVGAFL---TH-CGW-NSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEG 413 (477)
T ss_pred CCEEecC-CCCHHH---HhcCCCcCeEE---ec-CCc-hHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccC
Confidence 4577778 799865 67764443332 21 223 28999999999999986433 33433 333667665
Q ss_pred ----CCHHHHHHHHHHHHh
Q 011690 419 ----SSSSELADQLLMLFK 433 (479)
Q Consensus 419 ----~~~~~la~~l~~l~~ 433 (479)
-+.+++++++.+++.
T Consensus 414 ~~~~~~~~~v~~~v~~~m~ 432 (477)
T PLN02863 414 ADTVPDSDELARVFMESVS 432 (477)
T ss_pred CCCCcCHHHHHHHHHHHhh
Confidence 146789999998884
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=94.33 E-value=1.5 Score=40.84 Aligned_cols=62 Identities=21% Similarity=0.243 Sum_probs=36.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhc------CCcEEE--EecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhc
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLR------RSAFIV--DWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKM 171 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~------~~~~ii--~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 171 (479)
.+||+|++++|..- +..-++.++. |+|+|+ +|-... ..+.- -|.+++.
T Consensus 91 ~rPdvii~nGpg~~---vp~~~~~~l~~~~~~~~~kiIyIES~aRv~---------~lSlT------------Gklly~~ 146 (170)
T PF08660_consen 91 ERPDVIISNGPGTC---VPVCLAAKLLRLLGLRGSKIIYIESFARVK---------TLSLT------------GKLLYPF 146 (170)
T ss_pred hCCCEEEEcCCcee---eHHHHHHHHHHHhhccCCcEEEEEeeeecC---------CCchH------------HHHHHHh
Confidence 78999999996533 2222334444 788776 222111 01111 2344456
Q ss_pred CCEEEEeCHHHHHH
Q 011690 172 ANGCLCVTQAMQHE 185 (479)
Q Consensus 172 ad~vi~vS~~~~~~ 185 (479)
||.+++.-+++++.
T Consensus 147 aD~f~VQW~~l~~~ 160 (170)
T PF08660_consen 147 ADRFIVQWEELAEK 160 (170)
T ss_pred CCEEEEcCHHHHhH
Confidence 99999998877754
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=93.96 E-value=1.2 Score=48.13 Aligned_cols=93 Identities=17% Similarity=0.240 Sum_probs=59.1
Q ss_pred EEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEeC----
Q 011690 349 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS---- 419 (479)
Q Consensus 349 V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~~---- 419 (479)
+.+.+ |+|+.+ +|+...+..+. + ..|. ++++||+++|+|+|+-...+ ....+ +.-+.|+-+.
T Consensus 337 l~v~~-W~PQ~~---vL~h~~vg~fv---t-H~Gw-nS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQ-WAPQVE---ILSHRSIGGFL---S-HCGW-SSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEe-cCCHHH---HhccCccCeEE---e-cCCc-hhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 55666 899988 45566664443 2 1222 28899999999999986433 23333 3335565552
Q ss_pred ----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 420 ----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 420 ----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+.+++++++.+++.+ ..++.+.||+++.+++
T Consensus 408 ~~~v~~e~i~~~v~~lm~~---~~eeg~~~R~ra~~lk 442 (470)
T PLN03015 408 EKVIGREEVASLVRKIVAE---EDEEGQKIRAKAEEVR 442 (470)
T ss_pred CCccCHHHHHHHHHHHHcc---CcccHHHHHHHHHHHH
Confidence 367999999999962 1234566777776653
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.18 Score=48.93 Aligned_cols=106 Identities=15% Similarity=0.152 Sum_probs=60.0
Q ss_pred CCCCeEEEEEecCCCCCCHHH--HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC--hHH
Q 011690 261 PNRPALVVSSTSWTPDEDFGI--LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KES 336 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K~~~~--lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~--~~~ 336 (479)
.+++.+++..|.=.+.|.... ..+.+..+.+ . ...+++.|...+ .+.
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~----------------------------~-~~~vvl~g~~~~~~~~~ 153 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKE----------------------------R-GYRVVLLGGPEEQEKEI 153 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCC----------------------------C-T-EEEE--SSHHHHHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHh----------------------------h-CceEEEEccchHHHHHH
Confidence 455667777776556676543 5555554432 1 277888886654 222
Q ss_pred HHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc
Q 011690 337 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 404 (479)
Q Consensus 337 l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~ 404 (479)
.++..+...-..+.+.|. .+-.++..+++.||++|.+ .+| .+==|.|+|+|+|+--...
T Consensus 154 ~~~~~~~~~~~~~~~~~~-~~l~e~~ali~~a~~~I~~---Dtg-----~~HlA~a~~~p~v~lfg~t 212 (247)
T PF01075_consen 154 ADQIAAGLQNPVINLAGK-TSLRELAALISRADLVIGN---DTG-----PMHLAAALGTPTVALFGPT 212 (247)
T ss_dssp HHHHHTTHTTTTEEETTT-S-HHHHHHHHHTSSEEEEE---SSH-----HHHHHHHTT--EEEEESSS
T ss_pred HHHHHHhcccceEeecCC-CCHHHHHHHHhcCCEEEec---CCh-----HHHHHHHHhCCEEEEecCC
Confidence 222222221136888898 8999999999999999986 444 3445778999999884333
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.74 Score=46.05 Aligned_cols=91 Identities=9% Similarity=0.011 Sum_probs=57.1
Q ss_pred hcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhh--hhhhcCCC----chhHHHHHHHhHHHHHHHHhhc
Q 011690 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTL--LSLSLGRR----SHFVSIYRCFSVLRIEKYYGKM 171 (479)
Q Consensus 98 ~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~e~~~~~~ 171 (479)
...+.|++|+.+. -.+.+.+.+++...|+|+++|-|+...-- ..+..... ..+..++..+ +..+-+..++.
T Consensus 169 ~lP~advyHsvst--GyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~-f~~l~~~~Y~~ 245 (268)
T PF11997_consen 169 PLPKADVYHSVST--GYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRF-FESLSRLAYRA 245 (268)
T ss_pred cCCCCCEEecCCc--cHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHH-HHHHHHHHHHh
Confidence 3467899999984 33455666778889999999999974211 11111111 1222233333 55667888999
Q ss_pred CCEEEEeCHHHHHHHHHhhCC
Q 011690 172 ANGCLCVTQAMQHELAQNWGI 192 (479)
Q Consensus 172 ad~vi~vS~~~~~~l~~~~~~ 192 (479)
||.|+++.+..+++ +...|.
T Consensus 246 Ad~I~~l~~~n~~~-q~~~Ga 265 (268)
T PF11997_consen 246 ADRITPLYEYNREW-QIELGA 265 (268)
T ss_pred hCeecccchhhHHH-HHHhCC
Confidence 99999999976643 344454
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.42 Score=54.48 Aligned_cols=145 Identities=14% Similarity=0.142 Sum_probs=98.7
Q ss_pred cCCCCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-CChHH
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKES 336 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G-~~~~~ 336 (479)
+.++. +.++.+-|++..|.... ++..+..+.+- .+..........+++.|+- |.-..
T Consensus 539 ldp~s-Lfd~qakR~heYKRq~LNil~~i~ry~~i--------------------~~~p~~~~~P~~~IFaGKAaP~y~~ 597 (815)
T PRK14986 539 VNPKA-LFDVQIKRIHEYKRQLMNVLHVITRYNRI--------------------KADPDAKWVPRVNIFAGKAASAYYM 597 (815)
T ss_pred cCccc-ceeeeehhhhhhhhhhHHHhhhHHHHHHH--------------------HhCCCcCCCCeEEEEeecCCCCcHH
Confidence 34443 58889999999999888 77776666441 1110111234899999974 32222
Q ss_pred HHH---HHHHc--------CC-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 337 YEE---KIRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 337 l~~---~~~~~--------~l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
-++ .+.+. .+ + +|.|+-. ....--..++.+||+-.--++. ..|.-|+.=.=+|..|.+-++|--
T Consensus 598 aK~iIk~I~~va~~in~Dp~v~~~lkVVFlen-Y~vslAe~lipg~Dv~eqis~a-g~EASGTsnMK~alNGaLtlgtlD 675 (815)
T PRK14986 598 AKHIIHLINDVAKVINNDPQIGDKLKVVFIPN-YSVSLAQLIIPAADLSEQISLA-GTEASGTSNMKFALNGALTIGTLD 675 (815)
T ss_pred HHHHHHHHHHHHHHhccChhhcCceeEEEeCC-CCHHHHHHhhhhhhhhhhCCCC-CccccCcchhhHHhcCceeeeccC
Confidence 222 22111 12 2 6899887 7788888999999999865433 334455566778999999999999
Q ss_pred ccchhcccc--CccEEEe-CCHHHHHH
Q 011690 403 SCIEELVKV--DKNGLLF-SSSSELAD 426 (479)
Q Consensus 403 ~~~~e~i~~--~~~G~l~-~~~~~la~ 426 (479)
|...|+.++ ++||+++ .+.+++.+
T Consensus 676 G~nvEi~e~vG~eN~~~fG~~~~ev~~ 702 (815)
T PRK14986 676 GANVEMLEHVGEENIFIFGNTAEEVEA 702 (815)
T ss_pred CchhHHHHhcCCCcEEEeCCCHHHHHH
Confidence 999999987 8899999 45666555
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.72 Score=52.60 Aligned_cols=145 Identities=15% Similarity=0.151 Sum_probs=98.2
Q ss_pred cCCCCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-CChH-
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKE- 335 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G-~~~~- 335 (479)
+.|+. +..+.+-|++..|.... ++..+..+.+- .+..........+++.|+- |.-.
T Consensus 526 ldp~s-lfdvq~KR~heYKRq~LNil~ii~~y~~i--------------------~~~p~~~~~P~~~IFaGKAaP~y~~ 584 (797)
T cd04300 526 VDPDS-LFDVQVKRIHEYKRQLLNVLHIIHLYNRI--------------------KENPNADIVPRTFIFGGKAAPGYYM 584 (797)
T ss_pred cCCCc-cEEEEeeechhhhhhhhHHHhhHHHHHHH--------------------HhCCCcCCCCeEEEEeccCCCCcHH
Confidence 34444 58899999999999888 76666665441 1111112234889999974 2222
Q ss_pred --HHHHHHHHc--------CC-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 336 --SYEEKIRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 336 --~l~~~~~~~--------~l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
.+.+.+... .+ + +|.|+-. ....-...++.+||+-.--++. ..|.-|+.=.=+|..|.+-++|--
T Consensus 585 aK~iIklI~~va~~in~Dp~v~~~lkVVFlen-Y~VslAe~iipaaDvseqis~a-g~EASGTsnMK~~lNGaltlgtlD 662 (797)
T cd04300 585 AKLIIKLINAVADVVNNDPDVGDKLKVVFLPN-YNVSLAEKIIPAADLSEQISTA-GKEASGTGNMKFMLNGALTIGTLD 662 (797)
T ss_pred HHHHHHHHHHHHHHhccChhcCCceEEEEeCC-CChHHHHHhhhhhhhhhhCCCC-CccccCCchhhHHhcCceeeeccc
Confidence 222222221 12 2 5899887 7788888999999998865433 334455566778999999999999
Q ss_pred ccchhcccc--CccEEEe-CCHHHHHH
Q 011690 403 SCIEELVKV--DKNGLLF-SSSSELAD 426 (479)
Q Consensus 403 ~~~~e~i~~--~~~G~l~-~~~~~la~ 426 (479)
|...|+.+. ++|+++| .+.+++.+
T Consensus 663 GanvEi~e~vG~eN~fiFG~~~~ev~~ 689 (797)
T cd04300 663 GANVEIAEEVGEENIFIFGLTAEEVEA 689 (797)
T ss_pred chhHHHHHHhCcCcEEEeCCCHHHHHH
Confidence 999999887 8899999 45555554
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=92.39 E-value=4.7 Score=43.59 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=51.3
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhc-cccCccEEEe---
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEEL-VKVDKNGLLF--- 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~-i~~~~~G~l~--- 418 (479)
+++.+.+ |+|+.+ +|+...++.+. + ..|.. +++||+.+|+|+|+-...+ .... ++.-+.|+-+
T Consensus 332 ~~g~i~~-W~PQ~~---IL~H~~vg~Fv---T-H~Gwn-S~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~ 402 (468)
T PLN02207 332 GRGMICG-WSPQVE---ILAHKAVGGFV---S-HCGWN-SIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLD 402 (468)
T ss_pred CCeEEEE-eCCHHH---Hhcccccceee---e-cCccc-cHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecc
Confidence 4566666 899988 55665564432 2 12232 7899999999999986433 3343 3324556522
Q ss_pred --------CCHHHHHHHHHHHHh
Q 011690 419 --------SSSSELADQLLMLFK 433 (479)
Q Consensus 419 --------~~~~~la~~l~~l~~ 433 (479)
-+.+++++++.+++.
T Consensus 403 ~~~~~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 403 YRVHSDEIVNANEIETAIRCVMN 425 (468)
T ss_pred cccccCCcccHHHHHHHHHHHHh
Confidence 146799999999996
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=92.11 E-value=3.2 Score=44.74 Aligned_cols=78 Identities=17% Similarity=0.243 Sum_probs=52.1
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccC-ccEEEe---
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLF--- 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~-~~G~l~--- 418 (479)
++..+.+ |+|+.+ +|+..++..+. +.+ |. ++++||+.+|+|+|+-...+ ....+... +.|+-+
T Consensus 327 ~~g~v~~-W~PQ~~---iL~h~~vg~fv---tH~-G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 397 (455)
T PLN02152 327 EVGMIVS-WCSQIE---VLRHRAVGCFV---THC-GW-SSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVREN 397 (455)
T ss_pred CCeEEEe-eCCHHH---HhCCcccceEE---eeC-Cc-ccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecC
Confidence 5566666 899777 78888875553 212 12 27899999999999986433 33333331 234443
Q ss_pred ----CCHHHHHHHHHHHHh
Q 011690 419 ----SSSSELADQLLMLFK 433 (479)
Q Consensus 419 ----~~~~~la~~l~~l~~ 433 (479)
-+.+++++++.+++.
T Consensus 398 ~~~~~~~e~l~~av~~vm~ 416 (455)
T PLN02152 398 SEGLVERGEIRRCLEAVME 416 (455)
T ss_pred cCCcCcHHHHHHHHHHHHh
Confidence 146899999999997
|
|
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=92.02 E-value=11 Score=35.75 Aligned_cols=48 Identities=27% Similarity=0.337 Sum_probs=37.9
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
.++.....+.+.+++..+++.+|++|.. +-. ..+=|+++|+|+|+-+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~Is~----RlH----~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 237 FNVIIIDYSLSPDELLELISQADLVISM----RLH----GAILALSLGVPVIAISY 284 (286)
T ss_pred cceeEecCCCCHHHHHHHHhcCCEEEec----CCH----HHHHHHHcCCCEEEEec
Confidence 4555555558899999999999999963 333 67889999999998764
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=91.98 E-value=1.1 Score=45.37 Aligned_cols=72 Identities=14% Similarity=0.054 Sum_probs=48.3
Q ss_pred CEEEEEEecCC-ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe
Q 011690 322 RLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 400 (479)
Q Consensus 322 ~~~l~IvG~G~-~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas 400 (479)
+..+++.|.|+ +.+..++ +.+. ...+.+.|. .+-.++..+++.||++|.. .+| .+==|-|+|+|+|+-
T Consensus 210 ~~~ivl~~G~~~e~~~~~~-i~~~-~~~~~l~g~-~sL~elaali~~a~l~I~n---DSG-----p~HlA~A~g~p~val 278 (322)
T PRK10964 210 GLRIKLPWGAEHEEQRAKR-LAEG-FPYVEVLPK-LSLEQVARVLAGAKAVVSV---DTG-----LSHLTAALDRPNITL 278 (322)
T ss_pred CCeEEEeCCCHHHHHHHHH-HHcc-CCcceecCC-CCHHHHHHHHHhCCEEEec---CCc-----HHHHHHHhCCCEEEE
Confidence 45666753344 3333333 3332 245778898 8999999999999999975 444 334467899999987
Q ss_pred cCcc
Q 011690 401 SYSC 404 (479)
Q Consensus 401 ~~~~ 404 (479)
-.+.
T Consensus 279 fGpt 282 (322)
T PRK10964 279 YGPT 282 (322)
T ss_pred ECCC
Confidence 5433
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=91.84 E-value=2 Score=42.44 Aligned_cols=72 Identities=21% Similarity=0.280 Sum_probs=47.1
Q ss_pred CCCEEEEEEecCCCh---HHHHHHHHHc-CCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC
Q 011690 320 YPRLLFIITGKGPDK---ESYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL 395 (479)
Q Consensus 320 ~p~~~l~IvG~G~~~---~~l~~~~~~~-~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~ 395 (479)
.|++.++|-=. |.. ... ....++ +..++.+... .-.+.+++..||.++.- ++. +-+||+.+|+
T Consensus 153 ~p~~~lvvK~H-P~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~Ll~~s~~Vvti---nSt-----vGlEAll~gk 219 (269)
T PF05159_consen 153 NPDAKLVVKPH-PDERGGNKY-SYLEELPNLPNVVIIDD---DVNLYELLEQSDAVVTI---NST-----VGLEALLHGK 219 (269)
T ss_pred CCCCEEEEEEC-chhhCCCCh-hHhhhhhcCCCeEEECC---CCCHHHHHHhCCEEEEE---CCH-----HHHHHHHcCC
Confidence 67888776542 210 011 222222 3456666655 67899999999999975 233 7799999999
Q ss_pred cEEEecCcc
Q 011690 396 PVCAVSYSC 404 (479)
Q Consensus 396 PVIas~~~~ 404 (479)
||++-..+-
T Consensus 220 pVi~~G~~~ 228 (269)
T PF05159_consen 220 PVIVFGRAF 228 (269)
T ss_pred ceEEecCcc
Confidence 999975433
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=91.66 E-value=0.59 Score=53.15 Aligned_cols=145 Identities=16% Similarity=0.151 Sum_probs=98.4
Q ss_pred cCCCCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-CChH-
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKE- 335 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G-~~~~- 335 (479)
+.|+. +..+.+-|++..|.... ++..+..+.+- .+..........+++.|+- |.-.
T Consensus 523 ldp~s-lfdvq~KR~heYKRq~LNil~ii~~y~~i--------------------~~~p~~~~~P~~~IFaGKAaP~y~~ 581 (794)
T TIGR02093 523 VDPNS-IFDVQVKRLHEYKRQLLNVLHVIYLYNRI--------------------KEDPPKDIVPRTVIFGGKAAPGYHM 581 (794)
T ss_pred cCccc-cchhhheechhhhHHHHHHhhhHHHHHHH--------------------HhCCCcCCCCeEEEEEecCCCCcHH
Confidence 34444 47888999999999888 67766665541 1111111234789999974 3222
Q ss_pred --HHHHHHHHcC--------C-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 336 --SYEEKIRRLR--------L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 336 --~l~~~~~~~~--------l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
.+.+.+.... + + +|.|+-. ....-...++.+||+-.--++. ..|.-|+.=.=+|..|.+-++|--
T Consensus 582 aK~iIklI~~va~~iN~Dp~v~~~lkVVFlen-Y~VslAe~iipaaDvseqista-g~EASGTsnMK~alNGaltlgtlD 659 (794)
T TIGR02093 582 AKLIIKLINSVAEVVNNDPAVGDKLKVVFVPN-YNVSLAELIIPAADLSEQISTA-GKEASGTGNMKFMLNGALTIGTLD 659 (794)
T ss_pred HHHHHHHHHHHHHHhccChhhCCceeEEEeCC-CChHHHHHhhhhhhhhhhCCCC-CccccCcchhHHHhcCcceeeccc
Confidence 2222232222 3 2 6999987 7788888999999998865433 334455566778999999999999
Q ss_pred ccchhcccc--CccEEEe-CCHHHHHH
Q 011690 403 SCIEELVKV--DKNGLLF-SSSSELAD 426 (479)
Q Consensus 403 ~~~~e~i~~--~~~G~l~-~~~~~la~ 426 (479)
|...|+.++ ++|+|+| .+.+++.+
T Consensus 660 GanvEi~e~vG~eN~fiFG~~~~ev~~ 686 (794)
T TIGR02093 660 GANVEIREEVGAENIFIFGLTVEEVEA 686 (794)
T ss_pred chhHHHHHHhCcccEEEcCCCHHHHHH
Confidence 999999987 8899999 45555554
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=91.27 E-value=4.7 Score=45.58 Aligned_cols=143 Identities=15% Similarity=0.162 Sum_probs=85.7
Q ss_pred cCCCCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-CChH-
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKE- 335 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G-~~~~- 335 (479)
+.|+. +..+.+-|++..|.... ++..+..+.+- .+........+.+++.|+- |.-.
T Consensus 440 ldp~s-lfdv~~rR~heYKRq~LniL~ii~~y~ri--------------------k~~p~~~~~Pv~~IFaGKAhP~d~~ 498 (713)
T PF00343_consen 440 LDPDS-LFDVQARRFHEYKRQLLNILHIIDRYNRI--------------------KNNPNKKIRPVQFIFAGKAHPGDYM 498 (713)
T ss_dssp --TTS-EEEEEES-SCCCCTHHHHHHHHHHHHHHH--------------------HHSTTSCCS-EEEEEE----TT-HH
T ss_pred CCcch-hhhhhhhhcccccccCcccccHHHHHHHH--------------------HhcccCCCCCeEEEEeccCCCCcHH
Confidence 34443 67889999999999877 44444444331 1110112234899999975 3222
Q ss_pred --HHHHHHHHc--------CC-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 336 --SYEEKIRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 336 --~l~~~~~~~--------~l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
.+.+.+.+. .+ + +|.|+-. .+..-...++.++|+-+-.++. ..|.-|+.-.=+|..|.+-++|--
T Consensus 499 gK~iIk~I~~va~~in~Dp~v~~~lkVvFlen-YdvslA~~lipg~DVwln~p~~-p~EASGTSgMK~~~NGaL~lstlD 576 (713)
T PF00343_consen 499 GKEIIKLINNVAEVINNDPEVGDRLKVVFLEN-YDVSLAEKLIPGVDVWLNIPTR-PKEASGTSGMKAAMNGALNLSTLD 576 (713)
T ss_dssp HHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT--SHHHHHHHGGG-SEEEE---T-TSSSS-SHHHHHHHTT-EEEEESS
T ss_pred HHHHHHHHHHHHHHHhcChhhccceeEEeecC-CcHHHHHHHhhhhhhhhhCCCC-CccccCCCcchhhcCCCeEEeccc
Confidence 222222221 23 2 6899987 7888888999999999975433 446677788889999999999999
Q ss_pred ccchhcccc--CccEEEe-CCHHHH
Q 011690 403 SCIEELVKV--DKNGLLF-SSSSEL 424 (479)
Q Consensus 403 ~~~~e~i~~--~~~G~l~-~~~~~l 424 (479)
|..-|+.+. .+++++| .+.+++
T Consensus 577 G~niEi~e~vG~eN~fiFG~~~~ev 601 (713)
T PF00343_consen 577 GWNIEIAEAVGEENIFIFGLTAEEV 601 (713)
T ss_dssp TCHHHHHHHH-GGGSEEES-BHHHH
T ss_pred chhHHHHHhcCCCcEEEcCCCHHHH
Confidence 998888764 4678999 445554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.19 E-value=1.7 Score=43.53 Aligned_cols=103 Identities=16% Similarity=0.235 Sum_probs=62.7
Q ss_pred EEEecC-CChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe----
Q 011690 326 IITGKG-PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV---- 400 (479)
Q Consensus 326 ~IvG~G-~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas---- 400 (479)
+++|.+ |....+.+.+++. +++.+.-. .++|++++.+||+.+.. . |+++.|+...|+|.++-
T Consensus 190 iV~gs~~p~l~~l~k~~~~~--~~i~~~~~---~~dma~LMke~d~aI~A----a----GstlyEa~~lgvP~l~l~~a~ 256 (318)
T COG3980 190 IVVGSSNPTLKNLRKRAEKY--PNINLYID---TNDMAELMKEADLAISA----A----GSTLYEALLLGVPSLVLPLAE 256 (318)
T ss_pred EEecCCCcchhHHHHHHhhC--CCeeeEec---chhHHHHHHhcchheec----c----chHHHHHHHhcCCceEEeeec
Confidence 345643 5555555555543 67777655 89999999999999963 3 34999999999994333
Q ss_pred cCccchhccccCccEEEe-----CCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 011690 401 SYSCIEELVKVDKNGLLF-----SSSSELADQLLMLFKGFPDDSDVLKKLRN 447 (479)
Q Consensus 401 ~~~~~~e~i~~~~~G~l~-----~~~~~la~~l~~l~~~~~~~~~~~~~~~~ 447 (479)
+........ ..-|... -........+.++.+ |...++.+..
T Consensus 257 NQ~~~a~~f--~~lg~~~~l~~~l~~~~~~~~~~~i~~----d~~~rk~l~~ 302 (318)
T COG3980 257 NQIATAKEF--EALGIIKQLGYHLKDLAKDYEILQIQK----DYARRKNLSF 302 (318)
T ss_pred cHHHHHHHH--HhcCchhhccCCCchHHHHHHHHHhhh----CHHHhhhhhh
Confidence 322222222 1223333 224556666777777 4555555443
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=90.94 E-value=0.66 Score=52.72 Aligned_cols=145 Identities=14% Similarity=0.158 Sum_probs=97.5
Q ss_pred cCCCCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-CChH-
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKE- 335 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G-~~~~- 335 (479)
+.|+. +.++.+-|++..|.... ++..+..+.+- .+..........+++.|+- |.-.
T Consensus 525 ldp~s-lfdvq~kR~heYKRq~Lnil~ii~~y~~i--------------------~~~p~~~~~P~~~IFaGKAaP~y~~ 583 (798)
T PRK14985 525 INPQA-IFDVQIKRLHEYKRQHLNLLHILALYKEI--------------------RENPQADRVPRVFLFGAKAAPGYYL 583 (798)
T ss_pred cCchh-cchhhHhhhhhhhhhhhHhhhhHHHHHHH--------------------HhCCCcCCCCeEEEEeecCCCCcHH
Confidence 34443 57888999999999887 77766665541 1111111233899999974 2222
Q ss_pred --HHHHHHHHcC--------C-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 336 --SYEEKIRRLR--------L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 336 --~l~~~~~~~~--------l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
.+.+.|.... + + +|.|+-. ....-...++.+||+-.--++. ..|.-|+.=.=+|..|.+-++|--
T Consensus 584 aK~iIklI~~va~~in~Dp~v~~~lkVVFlen-Y~VslAe~lipaaDvseqis~a-g~EASGTsnMK~amNGaLtlgtlD 661 (798)
T PRK14985 584 AKNIIFAINKVAEVINNDPLVGDKLKVVFLPD-YCVSAAELLIPAADISEQISTA-GKEASGTGNMKLALNGALTVGTLD 661 (798)
T ss_pred HHHHHHHHHHHHHHhcCChhhCCceeEEEeCC-CChHHHHHHhhhhhhhhhCCCC-CccccCcchhHHHhcCceeeeccc
Confidence 2222222221 1 2 6999987 7888888999999998865433 334455566778999999999999
Q ss_pred ccchhcccc--CccEEEe-CCHHHHHH
Q 011690 403 SCIEELVKV--DKNGLLF-SSSSELAD 426 (479)
Q Consensus 403 ~~~~e~i~~--~~~G~l~-~~~~~la~ 426 (479)
|..-|+.+. ++||+++ .+.+++.+
T Consensus 662 GanvEi~e~vG~eN~f~fG~~~~ev~~ 688 (798)
T PRK14985 662 GANVEIAEQVGEENIFIFGHTVEQVKA 688 (798)
T ss_pred chHHHHHHHhCcCcEEEeCCCHHHHHH
Confidence 999899876 7899999 45555544
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=90.52 E-value=1.1 Score=36.99 Aligned_cols=73 Identities=10% Similarity=-0.013 Sum_probs=42.7
Q ss_pred CCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEE
Q 011690 53 HPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV 132 (479)
Q Consensus 53 ~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii 132 (479)
.+|++++.+|..+. ..-..++ .+...+.+++.++.+ ++.|+||.|+.-+. ..--+.+.++..|.+.|+
T Consensus 13 tngLKVYYlP~~~~--~~~~t~P--------t~~~~~pl~R~Ilir-E~I~IVHgH~a~S~-l~hE~i~hA~~mGlktVf 80 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF--YNQCTLP--------TLFGSFPLLRNILIR-ERIDIVHGHQAFST-LCHEAILHARTMGLKTVF 80 (90)
T ss_pred CCCeEEEeecchhh--hcCcchH--------HHHHhhHHHHHHHHH-cCeeEEEeehhhhH-HHHHHHHHHHhCCCcEEe
Confidence 57899999993321 1111111 122233334444444 89999999983221 112234567788999999
Q ss_pred EecCc
Q 011690 133 DWHNF 137 (479)
Q Consensus 133 ~~h~~ 137 (479)
|-|+.
T Consensus 81 TDHSL 85 (90)
T PF08288_consen 81 TDHSL 85 (90)
T ss_pred ecccc
Confidence 98875
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=90.14 E-value=3 Score=44.68 Aligned_cols=79 Identities=19% Similarity=0.323 Sum_probs=49.3
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-Ccc---c-hhccccCccEEEe-CC
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSC---I-EELVKVDKNGLLF-SS 420 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~---~-~e~i~~~~~G~l~-~~ 420 (479)
.+|.+.+ |+|+.++. ++...+..+. ...|+. .++|++.+|+|+|+.. .+. . .-+.+++..+.+. .+
T Consensus 335 ~nV~~~~-W~PQ~~ll--l~H~~v~~Fv----THgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~ 406 (496)
T KOG1192|consen 335 GNVVLSK-WAPQNDLL--LDHPAVGGFV----THGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRD 406 (496)
T ss_pred CceEEec-CCCcHHHh--cCCCcCcEEE----ECCccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhh
Confidence 4688888 89999976 3333343332 223454 5699999999999765 333 3 3445555555555 21
Q ss_pred --HHHHHHHHHHHHh
Q 011690 421 --SSELADQLLMLFK 433 (479)
Q Consensus 421 --~~~la~~l~~l~~ 433 (479)
...+.+++..++.
T Consensus 407 ~~~~~~~~~~~~il~ 421 (496)
T KOG1192|consen 407 LVSEELLEAIKEILE 421 (496)
T ss_pred cCcHHHHHHHHHHHc
Confidence 2337777777777
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=89.92 E-value=0.9 Score=49.24 Aligned_cols=79 Identities=13% Similarity=0.173 Sum_probs=55.3
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEeC--
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS-- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~~-- 419 (479)
.++.+.+ |+|+.+ +|+...+..+. +. .|+ ++++||+.+|+|+|+....+ ....+ +.-+.|...+
T Consensus 338 rg~vv~~-W~PQ~~---iL~h~~vg~Fi---tH-~G~-nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 338 RGFVVPS-WAPQAE---ILAHQAVGGFL---TH-CGW-SSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CCEEEee-cCCHHH---HhCCcccCeeE---ec-Cch-hHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 4588878 899887 67777774443 22 223 38999999999999997443 33444 3445676662
Q ss_pred ----CHHHHHHHHHHHHhc
Q 011690 420 ----SSSELADQLLMLFKG 434 (479)
Q Consensus 420 ----~~~~la~~l~~l~~~ 434 (479)
+.+++++++.+++.+
T Consensus 409 ~~~~~~~~l~~av~~vm~~ 427 (481)
T PLN02992 409 KEVISRSKIEALVRKVMVE 427 (481)
T ss_pred CCcccHHHHHHHHHHHhcC
Confidence 467999999999974
|
|
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=87.65 E-value=40 Score=35.50 Aligned_cols=107 Identities=16% Similarity=0.145 Sum_probs=63.4
Q ss_pred EEEecCCChHHHHHHHHHcC-CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc
Q 011690 326 IITGKGPDKESYEEKIRRLR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 404 (479)
Q Consensus 326 ~IvG~G~~~~~l~~~~~~~~-l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~ 404 (479)
+-.+...+..-.+..+.... ..++.+.-- -..+++...++++|+.|- ++.. .++=||+.|+|+|+-.+..
T Consensus 244 ~~~~~s~d~~va~~ia~~~~~~~~i~~~~d-~~~~~~~~~l~~~dl~Vg----~R~H----saI~al~~g~p~i~i~Y~~ 314 (385)
T COG2327 244 IDYGASDDLAVADAIAQLVLDSAEILVSSD-EYAEELGGILAACDLIVG----MRLH----SAIMALAFGVPAIAIAYDP 314 (385)
T ss_pred eeccccchhHHHHHHHhhcCCccceEeecc-hHHHHHHHHhccCceEEe----ehhH----HHHHHHhcCCCeEEEeecH
Confidence 33334344444444444433 256766643 114778889999999996 3444 7889999999999987544
Q ss_pred c-hhcccc-CccEEEe----CCHHHHHHHHHHHHhcCCCCHHHHHH
Q 011690 405 I-EELVKV-DKNGLLF----SSSSELADQLLMLFKGFPDDSDVLKK 444 (479)
Q Consensus 405 ~-~e~i~~-~~~G~l~----~~~~~la~~l~~l~~~~~~~~~~~~~ 444 (479)
- ..+.++ +-.++.. -+.+.+.+...+.+.. .++.+++
T Consensus 315 K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~---~~~~~~~ 357 (385)
T COG2327 315 KVRGLMQDLGLPGFAIDIDPLDAEILSAVVLERLTK---LDELRER 357 (385)
T ss_pred HHHHHHHHcCCCcccccCCCCchHHHHHHHHHHHhc---cHHHHhh
Confidence 2 222222 3345555 2366777777666664 4454433
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=85.97 E-value=15 Score=40.87 Aligned_cols=159 Identities=16% Similarity=0.135 Sum_probs=99.8
Q ss_pred ccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEec-CC
Q 011690 254 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-GP 332 (479)
Q Consensus 254 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~-G~ 332 (479)
|..++++.+. +++.....+. |=-...++.+..+.++ .|+-.|.+.-. --
T Consensus 750 r~~y~Lp~d~-vvf~~FNqLy--KidP~~l~~W~~ILk~---------------------------VPnS~LwllrfPa~ 799 (966)
T KOG4626|consen 750 RSQYGLPEDA-VVFCNFNQLY--KIDPSTLQMWANILKR---------------------------VPNSVLWLLRFPAV 799 (966)
T ss_pred CCCCCCCCCe-EEEeechhhh--cCCHHHHHHHHHHHHh---------------------------CCcceeEEEecccc
Confidence 4456676553 2333333332 4445677887777665 78766554432 11
Q ss_pred ChHHHHHHHHHcCC--CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccc-----
Q 011690 333 DKESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI----- 405 (479)
Q Consensus 333 ~~~~l~~~~~~~~l--~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~----- 405 (479)
-.+.++..+.++|+ ++|.|..- ...+|=..-..-||+.+-+..- .|.. +-.|.+.+|+|+|.-...-.
T Consensus 800 ge~rf~ty~~~~Gl~p~riifs~v-a~k~eHvrr~~LaDv~LDTplc-nGhT---Tg~dvLw~GvPmVTmpge~lAsrVa 874 (966)
T KOG4626|consen 800 GEQRFRTYAEQLGLEPDRIIFSPV-AAKEEHVRRGQLADVCLDTPLC-NGHT---TGMDVLWAGVPMVTMPGETLASRVA 874 (966)
T ss_pred chHHHHHHHHHhCCCccceeeccc-cchHHHHHhhhhhhhcccCcCc-CCcc---cchhhhccCCceeecccHHHHHHHH
Confidence 23788999999999 58999986 6667766677778888753211 3332 44688899999997642221
Q ss_pred -hhccccCccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 406 -EELVKVDKNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 406 -~e~i~~~~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
+-+.. -..|-++ ++-++..+.-.+|-. |.+.++++|...++.
T Consensus 875 ~Sll~~-~Gl~hliak~~eEY~~iaV~Lat----d~~~L~~lr~~l~~~ 918 (966)
T KOG4626|consen 875 ASLLTA-LGLGHLIAKNREEYVQIAVRLAT----DKEYLKKLRAKLRKA 918 (966)
T ss_pred HHHHHH-cccHHHHhhhHHHHHHHHHHhhc----CHHHHHHHHHHHHHH
Confidence 12222 2334444 788888888888877 577788887766653
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=84.05 E-value=3.6 Score=41.75 Aligned_cols=175 Identities=19% Similarity=0.201 Sum_probs=98.1
Q ss_pred CCeEEEEEecC--CCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHH
Q 011690 263 RPALVVSSTSW--TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 340 (479)
Q Consensus 263 ~~~~i~~~g~~--~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~ 340 (479)
.+.+-+.-|+= +-+.|...++.++-.+... ..+-+||+.|-++.+-..---..-=-|-++.
T Consensus 225 ~~viaLLPGsR~pea~~nl~~il~slcal~~~----------~a~vvfw~ai~~~lpl~~l~~l~e~~gWq~~------- 287 (412)
T COG4370 225 VPVIALLPGSRVPEAQTNLAVILGSLCALPAM----------FALVVFWAAIAPELPLLLLWTLEERQGWQPL------- 287 (412)
T ss_pred CceEEecCCCCChHHHhhHHHHHHHHhhhHHH----------HHHHHHHhccCcCCCHHHHHHHHHhcCcchh-------
Confidence 34444444432 2356777777765555432 2335899999887221110000000111121
Q ss_pred HHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccch----------hccc
Q 011690 341 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE----------ELVK 410 (479)
Q Consensus 341 ~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~----------e~i~ 410 (479)
+...+-+|..+ |++.+...+++.++|+.+-- -|+..=.+...|+|||+....|.. .++
T Consensus 288 ad~~~kdnc~l---~lsqqsfadiLH~adaalgm--------AGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLL- 355 (412)
T COG4370 288 ADRFGKDNCSL---WLSQQSFADILHAADAALGM--------AGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLL- 355 (412)
T ss_pred hhhhccCceEE---EEeHHHHHHHHHHHHHHHHh--------ccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHh-
Confidence 11222234544 56788999999999996632 133556688999999998754432 122
Q ss_pred cCccEEEeCCHHHHHHHHHH-HHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHhhcC
Q 011690 411 VDKNGLLFSSSSELADQLLM-LFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQFD 478 (479)
Q Consensus 411 ~~~~G~l~~~~~~la~~l~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 478 (479)
|..-.++....+-|.++.+ ++. |++.....|.|.++..-+. -.+..+.+++.+++|
T Consensus 356 -G~sltlv~~~aq~a~~~~q~ll~----dp~r~~air~nGqrRiGqa-------Gaa~rIAe~l~e~a~ 412 (412)
T COG4370 356 -GASLTLVRPEAQAAAQAVQELLG----DPQRLTAIRHNGQRRIGQA-------GAARRIAEELGEMAD 412 (412)
T ss_pred -cceeeecCCchhhHHHHHHHHhc----ChHHHHHHHhcchhhccCc-------chHHHHHHHHHHhcC
Confidence 3334445666666666666 777 6899999997777632122 144555556666654
|
|
| >KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] | Back alignment and domain information |
|---|
Probab=84.04 E-value=12 Score=40.50 Aligned_cols=122 Identities=11% Similarity=0.196 Sum_probs=77.4
Q ss_pred EEEEEEec---CCChHHHHHHHHH-cCC-CcEEEe-cCCCC---cchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhC
Q 011690 323 LLFIITGK---GPDKESYEEKIRR-LRL-KRVAFR-TMWLS---AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC 393 (479)
Q Consensus 323 ~~l~IvG~---G~~~~~l~~~~~~-~~l-~~V~f~-G~~~~---~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~ 393 (479)
+.+.++|. |.-++.+-+..++ .+. ..+... |. .+ ...+.+.++.|...++|...+ --...++||+..
T Consensus 291 ~L~~F~G~~~~~~iR~~L~~~~~~~~~~~~~~~~~~g~-~~~~~~~~y~~~m~~S~FCL~p~Gd~---~ts~R~fdai~~ 366 (464)
T KOG1021|consen 291 ILAFFAGAPAGGQIRSILLDLWKKDPDTEVFVNCPRGK-VSCDRPLNYMEGMQDSKFCLCPPGDT---PTSPRLFDAIVS 366 (464)
T ss_pred eEEEEeccccCCcHHHHHHHHhhcCcCccccccCCCCc-cccCCcchHHHHhhcCeEEECCCCCC---cccHhHHHHHHh
Confidence 56677775 4455566555555 111 122222 21 22 478999999999999994443 223389999999
Q ss_pred CC-cEEEecC--ccchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 011690 394 GL-PVCAVSY--SCIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 451 (479)
Q Consensus 394 G~-PVIas~~--~~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~ 451 (479)
|| |||.++. ....++++-.+.++.+. .+++-+.+.+++...+ .++...|+++...
T Consensus 367 gCvPViisd~~~lpf~~~~d~~~fSV~v~-~~~v~~~~~~iL~~i~--~~~~~~m~~~v~~ 424 (464)
T KOG1021|consen 367 GCVPVIISDGIQLPFGDVLDWTEFSVFVP-EKDVPELIKNILLSIP--EEEVLRMRENVIR 424 (464)
T ss_pred CCccEEEcCCcccCcCCCccceEEEEEEE-HHHhhhHHHHHHHhcC--HHHHHHHHHHHHH
Confidence 99 9999984 33556665555566666 6666666566666433 4555777777764
|
|
| >PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] | Back alignment and domain information |
|---|
Probab=83.02 E-value=1.6 Score=43.54 Aligned_cols=58 Identities=14% Similarity=0.282 Sum_probs=41.8
Q ss_pred cchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC-cEEEec--CccchhccccCccEEEe
Q 011690 358 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-PVCAVS--YSCIEELVKVDKNGLLF 418 (479)
Q Consensus 358 ~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~-PVIas~--~~~~~e~i~~~~~G~l~ 418 (479)
..++.+.|+.|...++|...+ ....-++|||++|| |||.++ .-...+++.=....+.+
T Consensus 227 ~~~~~~~l~~S~FCL~p~G~~---~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v 287 (302)
T PF03016_consen 227 PSEYMELLRNSKFCLCPRGDG---PWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRV 287 (302)
T ss_pred chHHHHhcccCeEEEECCCCC---cccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEE
Confidence 557999999999999984332 14458999999999 899886 33356777444555555
|
Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane |
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=82.16 E-value=16 Score=34.42 Aligned_cols=82 Identities=11% Similarity=0.058 Sum_probs=35.5
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEE-EecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii-~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+++.......+.+ ....+..|+|+++ .-.-...+. ..++.+..+ -+.+.+..|.+++.
T Consensus 94 ~~P~~~i~~EtElWPnl---l~~a~~~~ip~~LvNarls~~s~---------~~~~~~~~~-----~r~~l~~f~~i~aq 156 (186)
T PF04413_consen 94 WRPDLLIWVETELWPNL---LREAKRRGIPVVLVNARLSERSF---------RRYRRFPFL-----FRPLLSRFDRILAQ 156 (186)
T ss_dssp H--SEEEEES----HHH---HHH-----S-EEEEEE-----------------------HH-----HHHHGGG-SEEEES
T ss_pred hCCCEEEEEccccCHHH---HHHHhhcCCCEEEEeeeeccccc---------hhhhhhHHH-----HHHHHHhCCEEEEC
Confidence 69998777763333322 2334566889766 222221000 011111223 45566789999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecC
Q 011690 179 TQAMQHELAQNWGIK---ATVLYD 199 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n 199 (479)
|+...+.+.+. |.+ +.+..|
T Consensus 157 s~~da~r~~~l-G~~~~~v~v~Gn 179 (186)
T PF04413_consen 157 SEADAERFRKL-GAPPERVHVTGN 179 (186)
T ss_dssp SHHHHHHHHTT-T-S--SEEE---
T ss_pred CHHHHHHHHHc-CCCcceEEEeCc
Confidence 99999998776 665 566554
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.85 E-value=15 Score=33.64 Aligned_cols=99 Identities=24% Similarity=0.336 Sum_probs=57.6
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-CChHHHHHHHHH-
Q 011690 266 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYEEKIRR- 343 (479)
Q Consensus 266 ~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G-~~~~~l~~~~~~- 343 (479)
++|.+|.-. ++.||.++.. |+++.++.+- .+..+ ++=.|+| +.-+.-.+.++.
T Consensus 6 vFVTVGtT~----Fd~LI~~Vl~-----------------~~~~~~L~k~---G~~kL-iiQ~Grg~~~~~d~~~~~~k~ 60 (170)
T KOG3349|consen 6 VFVTVGTTS----FDDLISCVLS-----------------EEFLQELQKR---GFTKL-IIQIGRGQPFFGDPIDLIRKN 60 (170)
T ss_pred EEEEecccc----HHHHHHHHcC-----------------HHHHHHHHHc---CccEE-EEEecCCccCCCCHHHhhccc
Confidence 677777653 8899987642 2344444333 34322 2335777 222221222221
Q ss_pred cCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe
Q 011690 344 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 400 (479)
Q Consensus 344 ~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas 400 (479)
.++ .|....+ ...+.+.+++||+++. ..| -| +++|.+..|+|.|..
T Consensus 61 ~gl-~id~y~f---~psl~e~I~~AdlVIs----HAG--aG-S~letL~l~KPlivV 106 (170)
T KOG3349|consen 61 GGL-TIDGYDF---SPSLTEDIRSADLVIS----HAG--AG-SCLETLRLGKPLIVV 106 (170)
T ss_pred CCe-EEEEEec---CccHHHHHhhccEEEe----cCC--cc-hHHHHHHcCCCEEEE
Confidence 122 2444444 7788999999999994 122 22 799999999997765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 4e-08
Identities = 15/155 (9%), Positives = 51/155 (32%), Gaps = 26/155 (16%)
Query: 320 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 378
++ ++ GKGPD++ + ++L + F +++ + +L + + +H ++
Sbjct: 30 KQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGF----VNSNELLEILKTCT--LYVHAAN 83
Query: 379 S-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGF 435
+ ++ G+ + LF ++ +L+ ++
Sbjct: 84 VES--EAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWL--- 138
Query: 436 PDDSDVLKKLRNGTLEMGLSARWATE---WEEHAK 467
++ ++ M + E
Sbjct: 139 -ENKLERER-------MQNEYAKSALNYTLENSVI 165
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 49.4 bits (117), Expect = 1e-06
Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 17/146 (11%)
Query: 320 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 379
I G+ L L+ EDY LL + +G+ L S
Sbjct: 274 SNEWKIISVGEKHKDI-------ALGKGIHLNSLGKLTLEDYADLLKRSSIGISL-MISP 325
Query: 380 GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLLMLFKGFPD 437
P ++M GL V Y +L N + + +A+ L+ L
Sbjct: 326 HPSYP--PLEMAHFGLRVITNKYENK-DLSNWHSNIVSLEQLNPENIAETLVELC----M 378
Query: 438 DSDVLKKLRNGTLEMGLSARWATEWE 463
+ + + M E+
Sbjct: 379 SFNNRDVDKKESSNMMFYINEFNEFS 404
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 61/454 (13%), Positives = 136/454 (29%), Gaps = 143/454 (31%)
Query: 24 QALSLARQMS---LEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80
L +Q++ E+ + G P +P+I+ H + + + L
Sbjct: 32 VGTELGKQLAERGHEIHFITSGL--PFRLNKVYPNIYFH---EVTVNQYSVFQYPPYDLA 86
Query: 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFG 138
L + + + + D+ V +P + A + + H
Sbjct: 87 LASKMAEV--------AQRENLDILHVHYA--IPHAICAYLAKQMIGERIKIVTTLHGTD 136
Query: 139 YTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATV 196
T+L + ++ + ++ V+ ++ +E +
Sbjct: 137 ITVLGSDPSLN-------------NLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQT 183
Query: 197 LY---DQPPEFFHPTSLEE-KHELFCRLNK--ILHQPLGVQDCVSNAGMEGQKADETIFT 250
+Y D + + + K E ++ ++H +SN K
Sbjct: 184 VYNFID--ERVYFKRDMTQLKKEYGISESEKILIH--------ISN--FRKVK------- 224
Query: 251 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK 310
+ +++A A I+ E D+
Sbjct: 225 ---RVQD------------------------VVQAF-------AKIVTEVDAK------- 243
Query: 311 EISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAF---RTMWLSAEDYPLLLG 366
++ G GP+ + + ++ L + RV F + ++ LL
Sbjct: 244 --------------LLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ------DNVAELLA 283
Query: 367 SADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSE 423
+D + L S + +++ CG+P I E+++ G L ++
Sbjct: 284 MSD--LMLLLSEKES--FGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTG 339
Query: 424 LADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSAR 457
+ADQ + L K D ++ + MG AR
Sbjct: 340 VADQAIQLLK----DEELHRN-------MGERAR 362
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 28/160 (17%)
Query: 320 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL-HTSS 378
P +I G G + + + + V F L +D L +AD+ T
Sbjct: 227 RPDAQLLIVGSGRYESTLRRLATDVS-QNVKF-LGRLEYQDMINTLAAADIFAMPARTRG 284
Query: 379 SGLD---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFK 433
GLD L + ++ CG+PV A + E V GL+ S +L++ L+ L
Sbjct: 285 GGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETV-TPATGLVVEGSDVDKLSELLIEL-- 341
Query: 434 GFPDDSDVLKKLRNGTL--EMGLSAR-WATE---WEEHAK 467
L + MG + R WE +
Sbjct: 342 -----------LDDPIRRAAMGAAGRAHVEAEWSWEIMGE 370
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 32/163 (19%)
Query: 320 YPRLLFIITGKGPD-----KESYEEKIRRLRLKR-VAFRTMWL--SAEDYPLLLGSADLG 371
P + ++ G +E+ +R++ V T + A + ++D
Sbjct: 260 IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASD-- 317
Query: 372 VCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLFSSSSELADQL 428
V L S G + V + G PV + + I+ + + G L ++E + +
Sbjct: 318 VILQMSIREGF--GLTVTEAMWKGKPV--IGRAVGGIKFQIVDGETGFLVRDANEAVEVV 373
Query: 429 LMLFKGFPDDSDVLKKLRNGTLEMGLSAR-WATE---WEEHAK 467
L L K +V K+ MG A+ + +H +
Sbjct: 374 LYLLK----HPEVSKE-------MGAKAKERVRKNFIITKHME 405
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 1e-05
Identities = 65/462 (14%), Positives = 128/462 (27%), Gaps = 146/462 (31%)
Query: 73 KVLKPVLLLLKPLIQFFMLLWFLCVKIAS-----------PDV-FL---VQNPPSVPTLV 117
+ + +++ + L W L K + FL ++ P+++
Sbjct: 49 EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMM 108
Query: 118 AVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKY---YGKMANG 174
+ R +N ++ R ++ + + LR K G + G
Sbjct: 109 TRMYIEQRDRL------YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-VL-G 160
Query: 175 C-------------------------------------LCVTQAMQHELAQNWGIKATVL 197
L + Q + +++ NW T
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW----TSR 216
Query: 198 YDQPPEFFHPTSLEEKHELFCRLNKILHQP-----LGVQDCVSNAGMEGQKA-------- 244
D H + L ++L L V V NA + A
Sbjct: 217 SDHSSNIKLRI-----HSIQAELRRLLKSKPYENCLLVLLNVQNA--KAWNAFNLSCKIL 269
Query: 245 ----DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 300
+ + L+ +L S + TPDE +LL+ R + E
Sbjct: 270 LTTRFKQVTDFLSA----ATTTHISLDHHSMTLTPDEVKSLLLKYLDC---RPQDLPREV 322
Query: 301 DSTNE---EVFLKEISDG-------KQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVA 350
+TN + + I DG K +L II + S L+
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII------ESSLNV------LEPAE 370
Query: 351 FRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELV- 409
+R M+ L V +P ++ + + S + +V
Sbjct: 371 YRKMFD------------RLSVF----PPSAHIPTILLSLIWFDVI-----KSDVMVVVN 409
Query: 410 KVDKNGLL----FSSSSELADQLLMLFKGFPDDSDVLKKLRN 447
K+ K L+ S+ + L L ++ + + + +
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 2e-04
Identities = 33/269 (12%), Positives = 74/269 (27%), Gaps = 75/269 (27%)
Query: 262 NRPALVVSSTSWTPDEDFGILLEA--ALMYDRRVAAILNEDDSTNE-------------- 305
+ L V ++ + D + + +++ + I+ D+ +
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77
Query: 306 --EVFLKEISDGKQY--LYPRLLFIITGKGPDKESYEEKIRRL-------------RLKR 348
+ F++E+ Y L + Y E+ RL RL+
Sbjct: 78 MVQKFVEEVLR-INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP 136
Query: 349 V-AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE 407
R L V + G + G G A+ C+
Sbjct: 137 YLKLRQALLELRPAK--------NVLID----G---------VLGSGKTWVALD-VCLSY 174
Query: 408 LVKVDKNGLLF-------SSSSELADQLLMLF----KGFPDDSDVLKKLRNGTLEMGLSA 456
V+ + +F +S + + L L + SD ++ +
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234
Query: 457 RWATEWEEHAKPLI-------TEVISQFD 478
R + + + L+ + + F+
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFN 263
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 4e-05
Identities = 28/136 (20%), Positives = 44/136 (32%), Gaps = 28/136 (20%)
Query: 321 PRLLFIITGKGPDKESYEEKIRRLR---LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS 377
I G + E R++ V F +S E+ L L T+
Sbjct: 49 QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLG-SVSEEELIDLYSRCK--GLLCTA 105
Query: 378 SSGLDLPMKVVDMFG--------CGLPVCAVSYSCIEELVKVDKNGLLFSSSSE-LADQL 428
+ FG G PV AV+ +E V +K G L ++ + D +
Sbjct: 106 KD---------EDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVNEIIDAM 156
Query: 429 LMLFKGFPDDSDVLKK 444
+ K + D KK
Sbjct: 157 KKVSK----NPDKFKK 168
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 23/167 (13%), Positives = 44/167 (26%), Gaps = 31/167 (18%)
Query: 320 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 378
+ +E +L + V F + D L+ +AD + LH +
Sbjct: 225 LRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHF---FSGRNDVSELMAAAD--LLLHPAY 279
Query: 379 SGLDLPMKVVDMFG--------CGLPVCAVSYSCIEELVKVDKNGLLFSS---SSELADQ 427
+ G GLPV + + G + + +L +
Sbjct: 280 Q---------EAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEV 330
Query: 428 LLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 474
L S + + + E A +IT +
Sbjct: 331 LRKAL----TQSPLRMAWAENARHYADTQDLYS-LPEKAADIITGGL 372
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 9/109 (8%)
Query: 325 FIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLP 384
++ G + E ++E RR V + E LL SA + + + +G
Sbjct: 191 LVLAGPAWEPEYFDEITRRYG-STVEPIGE-VGGERRLDLLASAHAVLAMSQAVTGPWGG 248
Query: 385 -------MKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 426
V + G PV C+ E+V + + + +
Sbjct: 249 IWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDE 297
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 479 | |||
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.97 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.97 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.96 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.96 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.95 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.95 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.93 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.93 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.93 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.92 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.91 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.91 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.91 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.9 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.85 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.84 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.83 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.83 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.81 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.77 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.72 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.7 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.7 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.67 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.64 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.56 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.52 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.48 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.41 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.4 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.29 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.26 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.18 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.13 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.07 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 98.47 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 98.42 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.42 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 98.34 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.33 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.33 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 98.31 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 98.13 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 98.07 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 98.0 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 97.89 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.81 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 97.05 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 96.67 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 94.72 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 92.62 |
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=330.75 Aligned_cols=364 Identities=17% Similarity=0.158 Sum_probs=256.4
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCccc-ccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011690 22 QYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIA 100 (479)
Q Consensus 22 ~~~a~~La~~~G~eV~Vv~~~~~~~~~~-~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~ 100 (479)
...+..|+++ ||+|+|++......... ....+++++++++...............+. .+...+ +...+.+..
T Consensus 49 ~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~ 121 (438)
T 3c48_A 49 LSTATELAKQ-GIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLA---AFTGGM---LSFTRREKV 121 (438)
T ss_dssp HHHHHHHHHT-TCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSCCGGGGGGGHH---HHHHHH---HHHHHHHTC
T ss_pred HHHHHHHHhc-CCEEEEEecCCCCCCcccccccCCeEEEEecCCCccccchhHHHHHHH---HHHHHH---HHHHHhccC
Confidence 3445666664 99999999775422111 122478999999832111110111111111 111111 111122223
Q ss_pred CCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchh-HHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 101 ~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
+||+||+|. .....++.++++..++|+|+++|+..... .......... .....+ .++.+.+.+|.++++|
T Consensus 122 ~~Div~~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~d~ii~~s 192 (438)
T 3c48_A 122 TYDLIHSHY---WLSGQVGWLLRDLWRIPLIHTAHTLAAVK-NSYRDDSDTPESEARRI-----CEQQLVDNADVLAVNT 192 (438)
T ss_dssp CCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSSCHHHH-SCC----CCHHHHHHHH-----HHHHHHHHCSEEEESS
T ss_pred CCCEEEeCC---ccHHHHHHHHHHHcCCCEEEEecCCcccc-cccccccCCcchHHHHH-----HHHHHHhcCCEEEEcC
Confidence 599999998 33444555566777999999999975211 0000000111 111222 3778888999999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 255 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (479)
+.+++.+.+.+|.+ +.+|||+ +.+.|.+.+...+..+..+
T Consensus 193 ~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~------------------------------------ 236 (438)
T 3c48_A 193 QEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRE------------------------------------ 236 (438)
T ss_dssp HHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHH------------------------------------
T ss_pred HHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHh------------------------------------
Confidence 99999998877864 8999999 7777776543222222222
Q ss_pred ccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCC--CEEEEEEec---
Q 011690 256 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP--RLLFIITGK--- 330 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~l~IvG~--- 330 (479)
+++++++ .+++++|++.+.||++.+++|+..+.++ +| +++|+|+|+
T Consensus 237 -~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~---------------------------~p~~~~~l~i~G~~~~ 287 (438)
T 3c48_A 237 -LGIPLHT-KVVAFVGRLQPFKGPQVLIKAVAALFDR---------------------------DPDRNLRVIICGGPSG 287 (438)
T ss_dssp -TTCCSSS-EEEEEESCBSGGGCHHHHHHHHHHHHHH---------------------------CTTCSEEEEEECCBC-
T ss_pred -cCCCCCC-cEEEEEeeecccCCHHHHHHHHHHHHhh---------------------------CCCcceEEEEEeCCCC
Confidence 2343444 4899999999999999999999999876 66 899999998
Q ss_pred -CCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhc
Q 011690 331 -GPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEEL 408 (479)
Q Consensus 331 -G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~ 408 (479)
|+..+.+++.++++++ ++|.|+|. ++.+++..+|++||++|+| |..|++|++++|||+||+|||+++.++.+|+
T Consensus 288 ~g~~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~e~~~~~~~Eama~G~PvI~~~~~~~~e~ 363 (438)
T 3c48_A 288 PNATPDTYRHMAEELGVEKRIRFLDP-RPPSELVAVYRAADIVAVP---SFNESFGLVAMEAQASGTPVIAARVGGLPIA 363 (438)
T ss_dssp -----CHHHHHHHHTTCTTTEEEECC-CCHHHHHHHHHHCSEEEEC---CSCCSSCHHHHHHHHTTCCEEEESCTTHHHH
T ss_pred CCcHHHHHHHHHHHcCCCCcEEEcCC-CChHHHHHHHHhCCEEEEC---ccccCCchHHHHHHHcCCCEEecCCCChhHH
Confidence 8889999999999998 78999997 9999999999999999998 5678999999999999999999999999999
Q ss_pred cccCccEEEeC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHh
Q 011690 409 VKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 409 i~~~~~G~l~~--~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 475 (479)
+.++.+|++++ |+++++++|.++++ +++.++.+++++++....++|+..-++ +..+++++++
T Consensus 364 i~~~~~g~~~~~~d~~~la~~i~~l~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~ 427 (438)
T 3c48_A 364 VAEGETGLLVDGHSPHAWADALATLLD----DDETRIRMGEDAVEHARTFSWAATAAQ-LSSLYNDAIA 427 (438)
T ss_dssp SCBTTTEEEESSCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred hhCCCcEEECCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHhh
Confidence 99999999994 79999999999999 589999999999886655777665543 4556666654
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=328.08 Aligned_cols=361 Identities=15% Similarity=0.126 Sum_probs=270.3
Q ss_pred CCCcceEEEEEecCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCc-ccccCCCCeEEEEeecCCCCCCCCCchhHHH
Q 011690 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPV 78 (479)
Q Consensus 1 m~~~~~~~i~~~~~~g~~~r~~~~a~~La~~-~G~eV~Vv~~~~~~~~-~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~ 78 (479)
|++++++++++.......+|+...+..+++. .||+|+|++....... .......++++++++. ... + ......
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~ 75 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLDYEVIRWPR--SVM--L-PTPTTA 75 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTSCGGGEEEEEECSSHHHHHHHHTTCSSEEEEESS--SSC--C-SCHHHH
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHhcCCeEEEEECCCCccchhhhccccceEEEEccc--ccc--c-cchhhH
Confidence 6677777777754333457888888888887 5999999998765331 2333467899999982 211 1 122334
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCc-EEEEecCchhhhhhhhcCCCchhHHHHH
Q 011690 79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA-FIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (479)
Q Consensus 79 ~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~-~ii~~h~~~~~~~~~~~~~~~~~~~~~~ 157 (479)
..+.+.+.+ .+||+||++.+... ..++.++ +..++| +|+++|+..... ......+
T Consensus 76 ~~l~~~~~~------------~~~Dvv~~~~~~~~--~~~~~~~-~~~~~~~~i~~~h~~~~~~---------~~~~~~~ 131 (394)
T 3okp_A 76 HAMAEIIRE------------REIDNVWFGAAAPL--ALMAGTA-KQAGASKVIASTHGHEVGW---------SMLPGSR 131 (394)
T ss_dssp HHHHHHHHH------------TTCSEEEESSCTTG--GGGHHHH-HHTTCSEEEEECCSTHHHH---------TTSHHHH
T ss_pred HHHHHHHHh------------cCCCEEEECCcchH--HHHHHHH-HhcCCCcEEEEeccchhhh---------hhcchhh
Confidence 444444444 79999999985433 2333333 445666 777999865211 0112223
Q ss_pred HHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCC--eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccc
Q 011690 158 CFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 234 (479)
Q Consensus 158 ~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (479)
.. ++.+.+.+|.++++|+.+++.+.+.++. ++.+|||+ +.+.|.+.....+..+..++
T Consensus 132 ~~-----~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~-------------- 192 (394)
T 3okp_A 132 QS-----LRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKL-------------- 192 (394)
T ss_dssp HH-----HHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHT--------------
T ss_pred HH-----HHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhc--------------
Confidence 33 5667788999999999999999998766 48999999 77888875544545543332
Q ss_pred cccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhcc
Q 011690 235 SNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 314 (479)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (479)
+++++.+ +++++|++.+.||++.+++|+..+.++
T Consensus 193 -----------------------~~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l~~~---------------------- 226 (394)
T 3okp_A 193 -----------------------GFTDTTP-VIACNSRLVPRKGQDSLIKAMPQVIAA---------------------- 226 (394)
T ss_dssp -----------------------TCCTTCC-EEEEESCSCGGGCHHHHHHHHHHHHHH----------------------
T ss_pred -----------------------CCCcCce-EEEEEeccccccCHHHHHHHHHHHHhh----------------------
Confidence 3444444 899999999999999999999999886
Q ss_pred CcccCCCCEEEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCC-------CCCcHH
Q 011690 315 GKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-------LDLPMK 386 (479)
Q Consensus 315 ~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~-------e~~p~~ 386 (479)
.|+++|+|+|+|+..+.+++.+ .++ ++|.|+|. ++.+++..+|++||++|+| |.. |++|++
T Consensus 227 -----~~~~~l~i~G~g~~~~~l~~~~--~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~p---s~~~~~~~~~e~~~~~ 295 (394)
T 3okp_A 227 -----RPDAQLLIVGSGRYESTLRRLA--TDVSQNVKFLGR-LEYQDMINTLAAADIFAMP---ARTRGGGLDVEGLGIV 295 (394)
T ss_dssp -----STTCEEEEECCCTTHHHHHHHT--GGGGGGEEEEES-CCHHHHHHHHHHCSEEEEC---CCCBGGGTBCCSSCHH
T ss_pred -----CCCeEEEEEcCchHHHHHHHHH--hcccCeEEEcCC-CCHHHHHHHHHhCCEEEec---CccccccccccccCcH
Confidence 8899999999999999999888 556 78999997 9999999999999999999 444 999999
Q ss_pred HHHHHhCCCcEEEecCccchhccccCccEEEeC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhh-hhchHHHHH
Q 011690 387 VVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGL-SARWATEWE 463 (479)
Q Consensus 387 llEama~G~PVIas~~~~~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~w~~~~~ 463 (479)
++|||+||+|||+++.++..|++.++ +|++++ |+++++++|.++++ +++.++++++++++... .++|+..-+
T Consensus 296 ~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~s~~~~~~ 370 (394)
T 3okp_A 296 YLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLD----DPIRRAAMGAAGRAHVEAEWSWEIMGE 370 (394)
T ss_dssp HHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHT----CHHHHHHHHHHHHHHHHHHTBHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999999999999 999994 89999999999999 69999999999988543 467765544
Q ss_pred HHHHHHHHH
Q 011690 464 EHAKPLITE 472 (479)
Q Consensus 464 ~~~~~~~~~ 472 (479)
+ +..++++
T Consensus 371 ~-~~~~~~~ 378 (394)
T 3okp_A 371 R-LTNILQS 378 (394)
T ss_dssp H-HHHHHHS
T ss_pred H-HHHHHHH
Confidence 3 3444443
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=331.98 Aligned_cols=374 Identities=16% Similarity=0.125 Sum_probs=262.6
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCcccc-----------------cCCCCeEEEEeecCCCCCCCCCc-hhHH-HHHH
Q 011690 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAI-----------------LEHPSIHIHTMTQWPTIPRGLPK-VLKP-VLLL 81 (479)
Q Consensus 21 ~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~-----------------~~~~gi~i~~~~~~~~~~~~~~~-~~~~-~~~l 81 (479)
+...+..|+++ ||+|+|+|+......... ...+|+++++++........... .... ...+
T Consensus 24 ~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (439)
T 3fro_A 24 LTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKA 102 (439)
T ss_dssp HHHHHHHHHHT-TCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEESGGGGCSSTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEecchhccccccccCCcchhhhhh
Confidence 44456777775 999999997654332110 04579999999831111111111 1111 2222
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhH
Q 011690 82 LKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSV 161 (479)
Q Consensus 82 ~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (479)
..+...+..++..++.+..+||+||+|+ .....++.++++..++|+|++.|+...............+.+. ..+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~Dii~~~~---~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~-~~~~~ 178 (439)
T 3fro_A 103 VTFGRASVLLLNDLLREEPLPDVVHFHD---WHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSEL-APYPD 178 (439)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCSEEEEES---GGGHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGG-CCSSE
T ss_pred HHHHHHHHHHHHHHhccCCCCeEEEecc---hhhhhhHHHHhhccCCCEEEEecccccccCchHHhCccccccc-cccce
Confidence 2233333333444333347999999998 4455566667778899999999987521000000000000000 00001
Q ss_pred HHHHHHHhhcCCEEEEeCHHHHHHHHHhh---CCeEEEecCC-CCCCCCCCC-----hHHHHHHHHhhhhcccCCCCccc
Q 011690 162 LRIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQ-PPEFFHPTS-----LEEKHELFCRLNKILHQPLGVQD 232 (479)
Q Consensus 162 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~---~~~~~vi~n~-~~~~f~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 232 (479)
...++...+.||.++++|+.+++.....+ ..++.+|||| +.+.|.|.. ...+..+..+
T Consensus 179 ~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~------------- 245 (439)
T 3fro_A 179 IDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSK------------- 245 (439)
T ss_dssp ECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHH-------------
T ss_pred eeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHH-------------
Confidence 13377778899999999999998865533 3449999999 778887652 2223333333
Q ss_pred cccccccCCcccccchhccccccccccCCCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhh
Q 011690 233 CVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE 311 (479)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~ 311 (479)
++++++ .+++++|++. +.||++.+++|++.+.++
T Consensus 246 ------------------------~~~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~~------------------- 280 (439)
T 3fro_A 246 ------------------------FGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSK------------------- 280 (439)
T ss_dssp ------------------------HTCCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHTS-------------------
T ss_pred ------------------------cCCCCC--cEEEEEcccccccccHHHHHHHHHHHHhc-------------------
Confidence 234444 5899999999 999999999999998763
Q ss_pred hccCcccCC--CCEEEEEEecCCCh--HHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHH
Q 011690 312 ISDGKQYLY--PRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKV 387 (479)
Q Consensus 312 ~~~~~~~~~--p~~~l~IvG~G~~~--~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~l 387 (479)
. |+++|+|+|+|+.. +.+++.+++++ +.+.|.|. ++.+++..+|++||++|+| |..|++|+++
T Consensus 281 --------~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~-~~~~~~~~~~~~adv~v~p---s~~e~~~~~~ 347 (439)
T 3fro_A 281 --------KEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEM-LSREFVRELYGSVDFVIIP---SYFEPFGLVA 347 (439)
T ss_dssp --------GGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSC-CCHHHHHHHHTTCSEEEEC---BSCCSSCHHH
T ss_pred --------ccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCC-CCHHHHHHHHHHCCEEEeC---CCCCCccHHH
Confidence 4 89999999999977 88999999988 77889995 9999999999999999999 5568999999
Q ss_pred HHHHhCCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHH
Q 011690 388 VDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEH 465 (479)
Q Consensus 388 lEama~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 465 (479)
+|||+||+|||+|+.++.+|+++++ +|+++ .|+++++++|.++++. +++.++.+++++++....++|+...++
T Consensus 348 ~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~- 422 (439)
T 3fro_A 348 LEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKALEL---SRSDLSKFRENCKKRAMSFSWEKSAER- 422 (439)
T ss_dssp HHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHH---TTTTTHHHHHHHHHHHHTSCHHHHHHH-
T ss_pred HHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHhhCcHHHHHHH-
Confidence 9999999999999999999999887 99999 4799999999999994 367788898888886667888776654
Q ss_pred HHHHHHHHHh
Q 011690 466 AKPLITEVIS 475 (479)
Q Consensus 466 ~~~~~~~~~~ 475 (479)
...+++++++
T Consensus 423 ~~~~~~~~~~ 432 (439)
T 3fro_A 423 YVKAYTGSID 432 (439)
T ss_dssp HHHHHHTCSC
T ss_pred HHHHHHHHHH
Confidence 4556665544
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=332.24 Aligned_cols=371 Identities=15% Similarity=0.127 Sum_probs=259.5
Q ss_pred HHHHHHhhCCCcEEEEecCCCCCc-cc----cc---CCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011690 24 QALSLARQMSLEVDVVAYGGSKPH-AA----IL---EHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFL 95 (479)
Q Consensus 24 ~a~~La~~~G~eV~Vv~~~~~~~~-~~----~~---~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l 95 (479)
.+..|++ .||+|+|+|....... .. .. ...|+++++++. .+....... .....+..++.. +..+
T Consensus 42 la~~L~~-~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~--~~~~~~~~~-~~~~~~~~~~~~----l~~~ 113 (499)
T 2r60_A 42 VSLALAE-MGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPF--GGDKFLPKE-ELWPYLHEYVNK----IINF 113 (499)
T ss_dssp HHHHHHH-TTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEECC--SCSSCCCGG-GCGGGHHHHHHH----HHHH
T ss_pred HHHHHHh-cCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEecC--CCcCCcCHH-HHHHHHHHHHHH----HHHH
Confidence 3555555 4999999997654211 11 11 147999999983 221111110 000111111111 1122
Q ss_pred Hhhc-CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCC----chhHHHHHHHhHHHHHHHHhh
Q 011690 96 CVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR----SHFVSIYRCFSVLRIEKYYGK 170 (479)
Q Consensus 96 ~~~~-~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~e~~~~~ 170 (479)
+.+. .+||+||+|+ .....++.++++..++|+|++.|+..+.... ..... ..+.+.+++.....+++.+.+
T Consensus 114 l~~~~~~~Divh~~~---~~~~~~~~~~~~~~~~p~v~~~H~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (499)
T 2r60_A 114 YREEGKFPQVVTTHY---GDGGLAGVLLKNIKGLPFTFTGHSLGAQKME-KLNVNTSNFKEMDERFKFHRRIIAERLTMS 189 (499)
T ss_dssp HHHHTCCCSEEEEEH---HHHHHHHHHHHHHHCCCEEEECSSCHHHHHH-TTCCCSTTSHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEEcC---CcchHHHHHHHHhcCCcEEEEccCcccccch-hhccCCCCcchhhhhHHHHHHHHHHHHHHh
Confidence 2222 4899999998 3344555566777899999999997532211 01000 011111111112234788889
Q ss_pred cCCEEEEeCHHHHHHHHHh--hC-C-------eEEEecCC-CCCCCCCCCh-HHHHHHHHhhhhcccCCCCccccccccc
Q 011690 171 MANGCLCVTQAMQHELAQN--WG-I-------KATVLYDQ-PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSNAG 238 (479)
Q Consensus 171 ~ad~vi~vS~~~~~~l~~~--~~-~-------~~~vi~n~-~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (479)
.||.++++|+.+++.+.+. +| + ++.+|||| +.+.|.+... ..+..+..+++...
T Consensus 190 ~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~-------------- 255 (499)
T 2r60_A 190 YADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDL-------------- 255 (499)
T ss_dssp HCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHS--------------
T ss_pred cCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccc--------------
Confidence 9999999999999998877 77 4 39999999 7777877642 22233333322000
Q ss_pred cCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCccc
Q 011690 239 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 318 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (479)
..+.++++ +|+++||+.+.||++.+++|++.+.++
T Consensus 256 ------------------~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~-------------------------- 290 (499)
T 2r60_A 256 ------------------GSERMELP-AIIASSRLDQKKNHYGLVEAYVQNKEL-------------------------- 290 (499)
T ss_dssp ------------------CGGGTTSC-EEEECSCCCGGGCHHHHHHHHHTCHHH--------------------------
T ss_pred ------------------cccCCCCc-EEEEeecCccccCHHHHHHHHHHHHHh--------------------------
Confidence 00233444 899999999999999999999998764
Q ss_pred CCCC-EEEEEEec--CC------C-------hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcC----CEEEEcccC
Q 011690 319 LYPR-LLFIITGK--GP------D-------KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSA----DLGVCLHTS 377 (479)
Q Consensus 319 ~~p~-~~l~IvG~--G~------~-------~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~a----di~v~p~~~ 377 (479)
.|+ ++|+|+|+ |+ . .+.+++.++++++ ++|.|+|. ++.+++..+|++| |++|+|
T Consensus 291 -~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~-v~~~~~~~~~~~a~~~~dv~v~p--- 365 (499)
T 2r60_A 291 -QDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPL-NSQQELAGCYAYLASKGSVFALT--- 365 (499)
T ss_dssp -HHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEEC-CSHHHHHHHHHHHHHTTCEEEEC---
T ss_pred -CCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCC-CCHHHHHHHHHhcCcCCCEEEEC---
Confidence 344 68999998 44 2 7889999999999 78999997 9999999999999 999999
Q ss_pred CCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhh
Q 011690 378 SSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS 455 (479)
Q Consensus 378 s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
|..|+||++++|||+||+|||+|+.++.+|++.++.+|+++ .|+++|+++|.++++ +++.++.+++++++....
T Consensus 366 S~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 366 SFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE----SEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp CSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHH
Confidence 66789999999999999999999999999999999999999 479999999999999 689999999999886544
Q ss_pred -hchHHHHHHHHHHHHHHHHh
Q 011690 456 -ARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 456 -~~w~~~~~~~~~~~~~~~~~ 475 (479)
++|+...++ +..+++++++
T Consensus 442 ~fs~~~~~~~-~~~~y~~~~~ 461 (499)
T 2r60_A 442 RYTWQETARG-YLEVIQEIAD 461 (499)
T ss_dssp HSBHHHHHHH-HHHHHHHHHH
T ss_pred hCCHHHHHHH-HHHHHHHHHh
Confidence 888776654 5556666654
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=312.40 Aligned_cols=357 Identities=15% Similarity=0.191 Sum_probs=252.6
Q ss_pred EEecCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCC-chhHHHHHHHHHHHH
Q 011690 10 VVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLP-KVLKPVLLLLKPLIQ 87 (479)
Q Consensus 10 ~~~~~~g~~~r~-~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~ 87 (479)
..+++.|+.++. ...+..|+++ ||+|+|++....... ....++++++.++....+..... ........+.+.+.
T Consensus 21 ~~~p~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~- 96 (394)
T 2jjm_A 21 TCYPSVGGSGVVGTELGKQLAER-GHEIHFITSGLPFRL--NKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVAQ- 96 (394)
T ss_dssp ECCC--CHHHHHHHHHHHHHHHT-TCEEEEECSSCC------CCCTTEEEECCCCC----CCSCCHHHHHHHHHHHHHH-
T ss_pred hcCCCCCCHHHHHHHHHHHHHhC-CCEEEEEeCCCCCcc--cccCCceEEEecccccccccccccccHHHHHHHHHHHH-
Confidence 334444443332 2345666664 999999997543211 12346788877762111111110 00111111122222
Q ss_pred HHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhc--CCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHH
Q 011690 88 FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIE 165 (479)
Q Consensus 88 ~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~--~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 165 (479)
..+||+||+|++. +..+.+.++++.. ++|+|++.|+....... ... .++.+ +
T Consensus 97 -----------~~~~Dvv~~~~~~--~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-----~~~---~~~~~-----~ 150 (394)
T 2jjm_A 97 -----------RENLDILHVHYAI--PHAICAYLAKQMIGERIKIVTTLHGTDITVLG-----SDP---SLNNL-----I 150 (394)
T ss_dssp -----------HHTCSEEEECSST--THHHHHHHHHHHTTTCSEEEEECCHHHHHTTT-----TCT---TTHHH-----H
T ss_pred -----------HcCCCEEEEcchh--HHHHHHHHHHHhhcCCCCEEEEEecCcccccC-----CCH---HHHHH-----H
Confidence 2799999999742 3334444555454 59999999986432111 111 11223 5
Q ss_pred HHHhhcCCEEEEeCHHHHHHHHHhhCC--eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCc
Q 011690 166 KYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQ 242 (479)
Q Consensus 166 ~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (479)
+.+.+.+|.++++|+.+++.+.+.++. ++.+|||+ +.+.|.+.... .+..+
T Consensus 151 ~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~---~~~~~----------------------- 204 (394)
T 2jjm_A 151 RFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMT---QLKKE----------------------- 204 (394)
T ss_dssp HHHHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCH---HHHHH-----------------------
T ss_pred HHHHhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchH---HHHHH-----------------------
Confidence 666788999999999999999888765 49999999 77777665321 11111
Q ss_pred ccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCC
Q 011690 243 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 322 (479)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 322 (479)
++++++. .+++++|++.+.||++.+++|++.+.+ .++
T Consensus 205 --------------~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~ 241 (394)
T 2jjm_A 205 --------------YGISESE-KILIHISNFRKVKRVQDVVQAFAKIVT----------------------------EVD 241 (394)
T ss_dssp --------------TTCC----CEEEEECCCCGGGTHHHHHHHHHHHHH----------------------------SSC
T ss_pred --------------cCCCCCC-eEEEEeeccccccCHHHHHHHHHHHHh----------------------------hCC
Confidence 1233344 489999999999999999999999875 246
Q ss_pred EEEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec
Q 011690 323 LLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 401 (479)
Q Consensus 323 ~~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~ 401 (479)
++|+|+|+|+..+.+++.++++++ ++|.|.|. .+++..+|++||++|+| |..|++|++++|||+||+|||+++
T Consensus 242 ~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~---~~~~~~~~~~adv~v~p---s~~e~~~~~~~EAma~G~PvI~~~ 315 (394)
T 2jjm_A 242 AKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGK---QDNVAELLAMSDLMLLL---SEKESFGLVLLEAMACGVPCIGTR 315 (394)
T ss_dssp CEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBS---CSCTHHHHHTCSEEEEC---CSCCSCCHHHHHHHHTTCCEEEEC
T ss_pred CEEEEECCchHHHHHHHHHHHcCCCCeEEEeCc---hhhHHHHHHhCCEEEec---cccCCCchHHHHHHhcCCCEEEec
Confidence 899999999999999999999998 78999997 79999999999999999 567899999999999999999999
Q ss_pred CccchhccccCccEEEeC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHHHHHHHHHHHHhh
Q 011690 402 YSCIEELVKVDKNGLLFS--SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITEVISQ 476 (479)
Q Consensus 402 ~~~~~e~i~~~~~G~l~~--~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~ 476 (479)
.++.+|+++++.+|++++ |+++++++|.++++ +++.++.+++++++.. ..++|+...++ +..++++++++
T Consensus 316 ~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~----~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~ 388 (394)
T 2jjm_A 316 VGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLK----DEELHRNMGERARESVYEQFRSEKIVSQ-YETIYYDVLRD 388 (394)
T ss_dssp CTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHSCHHHHHHH-HHHHHHHTC--
T ss_pred CCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHhh
Confidence 999999999999999994 89999999999999 5899999999998865 67888776653 55666666543
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=310.11 Aligned_cols=357 Identities=14% Similarity=0.137 Sum_probs=247.8
Q ss_pred CCcceEEEEEecCCCCChhH----HHHHHHHHhhCCCcEEEEecCCCCC-cccccCCCCeEEEEeecCCCCCCCCCchhH
Q 011690 2 GRRGRACVVVLGDLGRSPRM----QYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIHIHTMTQWPTIPRGLPKVLK 76 (479)
Q Consensus 2 ~~~~~~~i~~~~~~g~~~r~----~~~a~~La~~~G~eV~Vv~~~~~~~-~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~ 76 (479)
.+++++++++.......+|. ...+..|+++ ||+|+|++...... ........+ ++++++.... .........
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 94 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA-GHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGS-VARLRFGPA 94 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT-TCEEEEEESCCTTSCCCTTEEECC-CCC-------------CCHH
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCccccCCcccccCC-cEEeccccCC-cccccccHH
Confidence 34555666653221222333 3456666664 99999999776533 111111222 4444441000 000000001
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHH
Q 011690 77 PVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIY 156 (479)
Q Consensus 77 ~~~~l~~~l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~ 156 (479)
....+.+.+.+ .+||+||++.+..... +.++++..++|+|+++|+.... ......+.
T Consensus 95 ~~~~l~~~l~~------------~~~Dii~~~~~~~~~~---~~~~~~~~~~~~i~~~h~~~~~--------~~~~~~~~ 151 (406)
T 2gek_A 95 THRKVKKWIAE------------GDFDVLHIHEPNAPSL---SMLALQAAEGPIVATFHTSTTK--------SLTLSVFQ 151 (406)
T ss_dssp HHHHHHHHHHH------------HCCSEEEEECCCSSSH---HHHHHHHEESSEEEEECCCCCS--------HHHHHHHH
T ss_pred HHHHHHHHHHh------------cCCCEEEECCccchHH---HHHHHHhcCCCEEEEEcCcchh--------hhhHHHHH
Confidence 11222222222 6999999999654432 3345556689999999986411 01111111
Q ss_pred HHHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccc
Q 011690 157 RCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 234 (479)
Q Consensus 157 ~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (479)
+++ + ...+.+|.++++|+.+++.+.+.++.+ + +|||+ +.+.|.+....
T Consensus 152 ~~~-----~-~~~~~~d~ii~~s~~~~~~~~~~~~~~~~-vi~~~v~~~~~~~~~~~----------------------- 201 (406)
T 2gek_A 152 GIL-----R-PYHEKIIGRIAVSDLARRWQMEALGSDAV-EIPNGVDVASFADAPLL----------------------- 201 (406)
T ss_dssp STT-----H-HHHTTCSEEEESSHHHHHHHHHHHSSCEE-ECCCCBCHHHHHTCCCC-----------------------
T ss_pred HHH-----H-HHHhhCCEEEECCHHHHHHHHHhcCCCcE-EecCCCChhhcCCCchh-----------------------
Confidence 222 4 566889999999999999998887766 7 99998 54334332210
Q ss_pred cccccCCcccccchhccccccccccCCCCCeEEEEEecC-CCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhc
Q 011690 235 SNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEIS 313 (479)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~-~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 313 (479)
...+.++ ..++++|++ .+.||++.+++|+..+.++
T Consensus 202 ----------------------~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~--------------------- 237 (406)
T 2gek_A 202 ----------------------DGYPREG-RTVLFLGRYDEPRKGMAVLLAALPKLVAR--------------------- 237 (406)
T ss_dssp ----------------------TTCSCSS-CEEEEESCTTSGGGCHHHHHHHHHHHHTT---------------------
T ss_pred ----------------------hhccCCC-eEEEEEeeeCccccCHHHHHHHHHHHHHH---------------------
Confidence 0122233 489999999 9999999999999998764
Q ss_pred cCcccCCCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCC-CCCCCcHHHHHHHh
Q 011690 314 DGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFG 392 (479)
Q Consensus 314 ~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-~~e~~p~~llEama 392 (479)
+|+++|+|+|+|+. +.+++.++++ .++|.|.|. ++.+++..+|++||++|+| | ..|++|++++|||+
T Consensus 238 ------~~~~~l~i~G~~~~-~~l~~~~~~~-~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~~e~~~~~~~Ea~a 305 (406)
T 2gek_A 238 ------FPDVEILIVGRGDE-DELREQAGDL-AGHLRFLGQ-VDDATKASAMRSADVYCAP---HLGGESFGIVLVEAMA 305 (406)
T ss_dssp ------STTCEEEEESCSCH-HHHHHHTGGG-GGGEEECCS-CCHHHHHHHHHHSSEEEEC---CCSCCSSCHHHHHHHH
T ss_pred ------CCCeEEEEEcCCcH-HHHHHHHHhc-cCcEEEEec-CCHHHHHHHHHHCCEEEec---CCCCCCCchHHHHHHH
Confidence 78999999999988 8888888776 478999997 9999999999999999998 5 48899999999999
Q ss_pred CCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHH
Q 011690 393 CGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLI 470 (479)
Q Consensus 393 ~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 470 (479)
||+|||+++.++..|++.++.+|+++ .|+++++++|.++++ +++.++.+++++++....++|+...++ +..++
T Consensus 306 ~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~ 380 (406)
T 2gek_A 306 AGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILE----DDQLRAGYVARASERVHRYDWSVVSAQ-IMRVY 380 (406)
T ss_dssp HTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHGGGGBHHHHHHH-HHHHH
T ss_pred cCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHH
Confidence 99999999999999999999999999 689999999999999 589999999999987667888766653 55666
Q ss_pred HHHHh
Q 011690 471 TEVIS 475 (479)
Q Consensus 471 ~~~~~ 475 (479)
++++.
T Consensus 381 ~~~~~ 385 (406)
T 2gek_A 381 ETVSG 385 (406)
T ss_dssp HHHCC
T ss_pred HHHHh
Confidence 66654
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=312.06 Aligned_cols=327 Identities=13% Similarity=0.094 Sum_probs=229.0
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011690 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIA 100 (479)
Q Consensus 21 ~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~ 100 (479)
+...+..|+++ ||+|+|++....... .+++++++++ .. . .....+ ....... +..++ +..
T Consensus 20 ~~~l~~~L~~~-G~~V~v~~~~~~~~~-----~~~~~v~~~~--~~-~--~~~~~~----~~~~~~~----l~~~i-~~~ 79 (374)
T 2iw1_A 20 FMRIASTVAAR-GHHVRVYTQSWEGDC-----PKAFELIQVP--VK-S--HTNHGR----NAEYYAW----VQNHL-KEH 79 (374)
T ss_dssp HHHHHHHHHHT-TCCEEEEESEECSCC-----CTTCEEEECC--CC-C--SSHHHH----HHHHHHH----HHHHH-HHS
T ss_pred HHHHHHHHHhC-CCeEEEEecCCCCCC-----CCCcEEEEEc--cC-c--ccchhh----HHHHHHH----HHHHH-hcc
Confidence 33456666775 999999997643211 2578999888 21 1 111111 1111111 11122 227
Q ss_pred CCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhh--cCCEEEEe
Q 011690 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGK--MANGCLCV 178 (479)
Q Consensus 101 ~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~ad~vi~v 178 (479)
+||+||++++..... +.++....+++.+.+.|+..+. .....+.+.++ ++...+ .+|.++++
T Consensus 80 ~~Dvv~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~~~d~ii~~ 143 (374)
T 2iw1_A 80 PADRVVGFNKMPGLD---VYFAADVCYAEKVAQEKGFLYR--------LTSRYRHYAAF-----ERATFEQGKSTKLMML 143 (374)
T ss_dssp CCSEEEESSCCTTCS---EEECCSCCHHHHHHHHCCHHHH--------TSHHHHHHHHH-----HHHHHSTTCCCEEEES
T ss_pred CCCEEEEecCCCCce---eeeccccccceeeeecccchhh--------hcHHHHHHHHH-----HHHHhhccCCcEEEEc
Confidence 999999998422110 0001111112222223332211 11111222333 555544 69999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCC-CCCCCCCCCh-HHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLA 253 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (479)
|+.+++.+.+.+|.+ +.++||| +.+.|.+... ..+..+..+
T Consensus 144 s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~---------------------------------- 189 (374)
T 2iw1_A 144 TDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQK---------------------------------- 189 (374)
T ss_dssp CHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHH----------------------------------
T ss_pred CHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHH----------------------------------
Confidence 999999998888864 8999999 7666765432 223333332
Q ss_pred ccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC
Q 011690 254 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 333 (479)
Q Consensus 254 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~ 333 (479)
+++++++ .+++++|++.+.||++.+++|+..+.++ ..++++|+|+|+|+
T Consensus 190 ---~~~~~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~~--------------------------~~~~~~l~i~G~g~- 238 (374)
T 2iw1_A 190 ---NGIKEQQ-NLLLQVGSDFGRKGVDRSIEALASLPES--------------------------LRHNTLLFVVGQDK- 238 (374)
T ss_dssp ---TTCCTTC-EEEEEECSCTTTTTHHHHHHHHHTSCHH--------------------------HHHTEEEEEESSSC-
T ss_pred ---hCCCCCC-eEEEEeccchhhcCHHHHHHHHHHhHhc--------------------------cCCceEEEEEcCCC-
Confidence 2343444 4899999999999999999999988653 13689999999998
Q ss_pred hHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccC
Q 011690 334 KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 412 (479)
Q Consensus 334 ~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~ 412 (479)
.+.+++.++++++ ++|.|+|. .+++..+|++||++|+| |..|++|++++|||+||+|||+++.++..|++.++
T Consensus 239 ~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~p---s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~ 312 (374)
T 2iw1_A 239 PRKFEALAEKLGVRSNVHFFSG---RNDVSELMAAADLLLHP---AYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADA 312 (374)
T ss_dssp CHHHHHHHHHHTCGGGEEEESC---CSCHHHHHHHCSEEEEC---CSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHH
T ss_pred HHHHHHHHHHcCCCCcEEECCC---cccHHHHHHhcCEEEec---cccCCcccHHHHHHHCCCCEEEecCCCchhhhccC
Confidence 4788999999998 78999997 78999999999999998 66789999999999999999999999999999999
Q ss_pred ccEEEeC---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhch
Q 011690 413 KNGLLFS---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW 458 (479)
Q Consensus 413 ~~G~l~~---~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w 458 (479)
.+|+++. |+++++++|.++++ +++.++.+++++++....++|
T Consensus 313 ~~g~~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~ 357 (374)
T 2iw1_A 313 NCGTVIAEPFSQEQLNEVLRKALT----QSPLRMAWAENARHYADTQDL 357 (374)
T ss_dssp TCEEEECSSCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHSCC
T ss_pred CceEEeCCCCCHHHHHHHHHHHHc----ChHHHHHHHHHHHHHHHHhhH
Confidence 9999995 79999999999999 589999999999886555544
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=314.21 Aligned_cols=275 Identities=16% Similarity=0.204 Sum_probs=206.0
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEE-Ee
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCL-CV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi-~v 178 (479)
.+||+||+|++..... ..+++ .++|+|++.|+.... .....++.+ ++.+ ..+|.++ ++
T Consensus 125 ~~~Dvv~~~~~~~~~~---~~~~~--~~~p~v~~~h~~~~~----------~~~~~~~~~-----~~~~-~~~~~~i~~~ 183 (416)
T 2x6q_A 125 SSFDYVLVHDPQPAAL---IEFYE--KKSPWLWRCHIDLSS----------PNREFWEFL-----RRFV-EKYDRYIFHL 183 (416)
T ss_dssp GGSSEEEEESSTTGGG---GGGSC--CCSCEEEECCSCCSS----------CCHHHHHHH-----HHHH-TTSSEEEESS
T ss_pred cCCCEEEEeccchhhH---HHHHH--hcCCEEEEEccccCC----------ccHHHHHHH-----HHHH-HhCCEEEEec
Confidence 6899999999643321 11222 248999999986411 111222222 4444 4566655 66
Q ss_pred CHHHHHHHHHhhC-CeEEEecCC-CCCCCCCC--ChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 179 TQAMQHELAQNWG-IKATVLYDQ-PPEFFHPT--SLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 179 S~~~~~~l~~~~~-~~~~vi~n~-~~~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
|+..++. +. .++.+|||| +...|.+. +...+..+..+
T Consensus 184 s~~~~~~----~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~----------------------------------- 224 (416)
T 2x6q_A 184 PEYVQPE----LDRNKAVIMPPSIDPLSEKNVELKQTEILRILER----------------------------------- 224 (416)
T ss_dssp GGGSCTT----SCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHH-----------------------------------
T ss_pred hHHHHhh----CCccceEEeCCCCChhhhcccccChhhHHHHHHH-----------------------------------
Confidence 7665542 23 358899999 66555432 22233333322
Q ss_pred cccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC-
Q 011690 255 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD- 333 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~- 333 (479)
++++++++ +++++||+.+.||++.+++|++.+.++ .|+++|+|+|+|+.
T Consensus 225 --~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~ 274 (416)
T 2x6q_A 225 --FDVDPEKP-IITQVSRFDPWKGIFDVIEIYRKVKEK---------------------------IPGVQLLLVGVMAHD 274 (416)
T ss_dssp --TTCCTTSC-EEEEECCCCTTSCHHHHHHHHHHHHHH---------------------------CTTCEEEEEECCCTT
T ss_pred --hCCCCCCc-EEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEecCccc
Confidence 23445554 899999999999999999999999876 78999999999975
Q ss_pred ----hHHHHHHHHHcCC-CcEEEecCCCC---cchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccc
Q 011690 334 ----KESYEEKIRRLRL-KRVAFRTMWLS---AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 405 (479)
Q Consensus 334 ----~~~l~~~~~~~~l-~~V~f~G~~~~---~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~ 405 (479)
.+.+++.++++++ ++|.|+|. ++ .+++..+|++||++|+| |..|++|++++|||+||+|||+|+.++.
T Consensus 275 ~~~~~~~l~~~~~~~~~~~~V~~~G~-~~~~~~~~~~~~~~~ad~~v~p---s~~E~~~~~~lEAma~G~PvI~~~~~g~ 350 (416)
T 2x6q_A 275 DPEGWIYFEKTLRKIGEDYDVKVLTN-LIGVHAREVNAFQRASDVILQM---SIREGFGLTVTEAMWKGKPVIGRAVGGI 350 (416)
T ss_dssp CHHHHHHHHHHHHHHTTCTTEEEEEG-GGTCCHHHHHHHHHHCSEEEEC---CSSCSSCHHHHHHHHTTCCEEEESCHHH
T ss_pred chhHHHHHHHHHHHhCCCCcEEEecc-cCCCCHHHHHHHHHhCCEEEEC---CCcCCCccHHHHHHHcCCCEEEccCCCC
Confidence 4678888999998 79999994 44 67999999999999998 6679999999999999999999999999
Q ss_pred hhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhhchHHHHHHHHHHHHHHH
Q 011690 406 EELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSARWATEWEEHAKPLITEV 473 (479)
Q Consensus 406 ~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~ 473 (479)
+|++.++.+|++++|+++++++|.++++ +++.++.+++++++.. ..++|+...++ ...+++++
T Consensus 351 ~e~i~~~~~g~l~~d~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~~fs~~~~~~~-~~~~~~~l 414 (416)
T 2x6q_A 351 KFQIVDGETGFLVRDANEAVEVVLYLLK----HPEVSKEMGAKAKERVRKNFIITKHMER-YLDILNSL 414 (416)
T ss_dssp HHHCCBTTTEEEESSHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHTBHHHHHHH-HHHHHHTC
T ss_pred hhheecCCCeEEECCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHcCHHHHHHH-HHHHHHHh
Confidence 9999999999999999999999999999 5899999999988754 35777766543 34444443
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=307.83 Aligned_cols=298 Identities=13% Similarity=0.117 Sum_probs=216.5
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHH-HhcCCcEEEEecCchhhh-hh---hh-cCCCchhHH--HHHHHhHHHHHHHHhhc
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTL-LS---LS-LGRRSHFVS--IYRCFSVLRIEKYYGKM 171 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~-~~~~~~~ii~~h~~~~~~-~~---~~-~~~~~~~~~--~~~~~~~~~~e~~~~~~ 171 (479)
.+||+||+|++ ....++.+++ +..++|+|++.|+..+.- .. .. .+....... ...++.....++...+.
T Consensus 128 ~~~Divh~~~~---~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 2qzs_A 128 WRPDVVHAHDW---HAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYY 204 (485)
T ss_dssp CCCSEEEEETG---GGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHH
T ss_pred CCCCEEEeecc---chhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHh
Confidence 68999999983 2233344444 567899999999864210 00 00 000000000 00000011236677788
Q ss_pred CCEEEEeCHHHHHHHHHh-hC-------------CeEEEecCC-CCCCCCCCChH----------------HHHHHHHhh
Q 011690 172 ANGCLCVTQAMQHELAQN-WG-------------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 220 (479)
Q Consensus 172 ad~vi~vS~~~~~~l~~~-~~-------------~~~~vi~n~-~~~~f~~~~~~----------------~~~~~~~~~ 220 (479)
+|.++++|+.+++.+.+. +| .++.+|||| +.+.|.+.... .+..+..+
T Consensus 205 ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~- 283 (485)
T 2qzs_A 205 ADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIA- 283 (485)
T ss_dssp CSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHH-
T ss_pred cCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHH-
Confidence 999999999999988654 44 569999999 77777765311 12222222
Q ss_pred hhcccCCCCccccccccccCCcccccchhccccccccccCC-CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhcc
Q 011690 221 NKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 299 (479)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~ 299 (479)
+++++ .+..+++++||+.+.||++.+++|++.+.+
T Consensus 284 ------------------------------------~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~-------- 319 (485)
T 2qzs_A 284 ------------------------------------MGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE-------- 319 (485)
T ss_dssp ------------------------------------HTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--------
T ss_pred ------------------------------------cCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--------
Confidence 23443 123489999999999999999999999864
Q ss_pred CCCchhhhhHhhhccCcccCCCCEEEEEEecCC--ChHHHHHHHHHcCCCcEE-EecCCCCcchHHHHHHcCCEEEEccc
Q 011690 300 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHT 376 (479)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~--~~~~l~~~~~~~~l~~V~-f~G~~~~~~~~~~~l~~adi~v~p~~ 376 (479)
++++|+|+|+|+ ..+.+++.+++++ ++|. |.|. +.+++..+|++||++|+|
T Consensus 320 ---------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~p-- 373 (485)
T 2qzs_A 320 ---------------------QGGQLALLGAGDPVLQEGFLAAAAEYP-GQVGVQIGY--HEAFSHRIMGGADVILVP-- 373 (485)
T ss_dssp ---------------------TTCEEEEEEEECHHHHHHHHHHHHHST-TTEEEEESC--CHHHHHHHHHHCSEEEEC--
T ss_pred ---------------------CCcEEEEEeCCchHHHHHHHHHHHhCC-CcEEEeCCC--CHHHHHHHHHhCCEEEEC--
Confidence 379999999996 5788888888876 7886 7774 667779999999999999
Q ss_pred CCCCCCCcHHHHHHHhCCCcEEEecCccchhccccC---------ccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHH
Q 011690 377 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKL 445 (479)
Q Consensus 377 ~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~---------~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~ 445 (479)
|..|+||++++|||+||+|||+|+.|+.+|++.++ .+|+++ .|+++|+++|.++++.. ++++.++++
T Consensus 374 -S~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~-~~~~~~~~~ 451 (485)
T 2qzs_A 374 -SRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLW-SRPSLWRFV 451 (485)
T ss_dssp -CSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHH-TSHHHHHHH
T ss_pred -CccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHc-CCHHHHHHH
Confidence 66789999999999999999999999999999998 899999 47999999999999300 068999999
Q ss_pred HHHHHHhhhhhchHHHHHHHHHHHHHHHHhh
Q 011690 446 RNGTLEMGLSARWATEWEEHAKPLITEVISQ 476 (479)
Q Consensus 446 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 476 (479)
++++++ ..++|+...++ ...++++++.+
T Consensus 452 ~~~~~~--~~fs~~~~~~~-~~~ly~~~~~~ 479 (485)
T 2qzs_A 452 QRQAMA--MDFSWQVAAKS-YRELYYRLKLE 479 (485)
T ss_dssp HHHHHH--CCCCHHHHHHH-HHHHHHHHC--
T ss_pred HHHHHh--hcCCHHHHHHH-HHHHHHHhhhh
Confidence 999876 47899887754 56677766543
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=326.24 Aligned_cols=373 Identities=11% Similarity=0.088 Sum_probs=249.9
Q ss_pred HHHHhhCCCcEE----EEecCCCCC--------cccccCCCCeEEEEeecCCCC---CCCCCchhHHHHHHHHHHHHHHH
Q 011690 26 LSLARQMSLEVD----VVAYGGSKP--------HAAILEHPSIHIHTMTQWPTI---PRGLPKVLKPVLLLLKPLIQFFM 90 (479)
Q Consensus 26 ~~La~~~G~eV~----Vv~~~~~~~--------~~~~~~~~gi~i~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~ 90 (479)
..|+++ ||+|+ |+|.....+ ...+...+|++|+++|..+.. .....+. ....++..+.. .
T Consensus 321 ~~L~~~-G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~-~L~~~L~~F~~---~ 395 (816)
T 3s28_A 321 QRIKQQ-GLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRF-EVWPYLETYTE---D 395 (816)
T ss_dssp HHHHHT-TCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTT-TCGGGHHHHHH---H
T ss_pred HHHHHC-CCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHH-HHHHHHHHHHH---H
Confidence 345554 99886 898653221 111222469999999943311 0111110 00111111111 1
Q ss_pred HHHHHHhh-cCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHh
Q 011690 91 LLWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYG 169 (479)
Q Consensus 91 ~~~~l~~~-~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 169 (479)
.+..++.. ..+||+||+|. ..+..++.++++..|+|+|++.|+...............+...++.......|+..+
T Consensus 396 ~l~~il~~~~~~PDVIHsH~---~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l 472 (816)
T 3s28_A 396 AAVELSKELNGKPDLIIGNY---SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAM 472 (816)
T ss_dssp HHHHHHHHCSSCCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeEEEeCC---chHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 12222222 24799999997 556667778888889999999999763211100000001111111111123477888
Q ss_pred hcCCEEEEeCHHHHHHHHH---hhCC---------------------eEEEecCC-CCCCCCCCChHHHH--HHHHhhhh
Q 011690 170 KMANGCLCVTQAMQHELAQ---NWGI---------------------KATVLYDQ-PPEFFHPTSLEEKH--ELFCRLNK 222 (479)
Q Consensus 170 ~~ad~vi~vS~~~~~~l~~---~~~~---------------------~~~vi~n~-~~~~f~~~~~~~~~--~~~~~~~~ 222 (479)
+.||.||++|+..++.+.+ .|+. ++.+|||| |.+.|.|.....+. .+...+..
T Consensus 473 ~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~ 552 (816)
T 3s28_A 473 NHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEE 552 (816)
T ss_dssp HHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHH
T ss_pred HhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccc
Confidence 9999999999998874221 1111 68999999 88888776422110 00000000
Q ss_pred cccCCCCccccccccccCCcccccchhcccccccccc--CCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccC
Q 011690 223 ILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 300 (479)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~ 300 (479)
....| .-.+..+++ .++++ +|+++||+.+.||++.+++|+..+.++
T Consensus 553 ~l~~p-----------------------~~~r~~lg~l~~~~~~-vIl~vGRl~~~KGid~LIeA~~~L~~~-------- 600 (816)
T 3s28_A 553 LLYSD-----------------------VENKEHLCVLKDKKKP-ILFTMARLDRVKNLSGLVEWYGKNTRL-------- 600 (816)
T ss_dssp HHHCS-----------------------CCBTTEESCBSCTTSC-EEEEECCCCTTTTHHHHHHHHHHCHHH--------
T ss_pred cccch-----------------------hhHHHHhcccCCCCCe-EEEEEccCcccCCHHHHHHHHHHHHhh--------
Confidence 00000 001222333 34454 899999999999999999999999875
Q ss_pred CCchhhhhHhhhccCcccCCCCEEEEEEecCC-----------ChHHHHHHHHHcCC-CcEEEecC---CCCcchHHHHH
Q 011690 301 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-----------DKESYEEKIRRLRL-KRVAFRTM---WLSAEDYPLLL 365 (479)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~-----------~~~~l~~~~~~~~l-~~V~f~G~---~~~~~~~~~~l 365 (479)
.|+++|+|+|+|+ ..+.+++.++++++ ++|.|+|. +++.+++..+|
T Consensus 601 -------------------~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~ 661 (816)
T 3s28_A 601 -------------------RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYI 661 (816)
T ss_dssp -------------------HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHH
T ss_pred -------------------CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHH
Confidence 6789999999998 56788999999999 79999994 13458899999
Q ss_pred H-cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHH----hcCCCC
Q 011690 366 G-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLF----KGFPDD 438 (479)
Q Consensus 366 ~-~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~----~~~~~~ 438 (479)
+ ++|++|+| |..|+||++++||||||+|||+|+.|+.+|++.++.+|+++ .|++++|++|.+++ + |
T Consensus 662 ~~aaDvfV~P---S~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~----d 734 (816)
T 3s28_A 662 CDTKGAFVQP---ALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKE----D 734 (816)
T ss_dssp HHTTCEEEEC---CSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHH----C
T ss_pred HhcCeEEEEC---CCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhcc----C
Confidence 8 68999999 67799999999999999999999999999999999999999 47999999998776 6 6
Q ss_pred HHHHHHHHHHHHHhh-hhhchHHHHHH
Q 011690 439 SDVLKKLRNGTLEMG-LSARWATEWEE 464 (479)
Q Consensus 439 ~~~~~~~~~~~~~~~-~~~~w~~~~~~ 464 (479)
++.++++++++++.. ..++|+...++
T Consensus 735 ~~~~~~m~~~ar~~a~~~fSwe~~a~~ 761 (816)
T 3s28_A 735 PSHWDEISKGGLQRIEEKYTWQIYSQR 761 (816)
T ss_dssp THHHHHHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 899999999998865 57888766554
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-35 Score=306.95 Aligned_cols=295 Identities=12% Similarity=0.111 Sum_probs=218.0
Q ss_pred cCCCcEEEEeCCCCcchHHHHHHHHHh--cCCcEEEEecCchhhh-hh---h-hcCCCchhHH--HHHHHhHHHHHHHHh
Q 011690 99 IASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTL-LS---L-SLGRRSHFVS--IYRCFSVLRIEKYYG 169 (479)
Q Consensus 99 ~~~~DvI~~~~p~~~~~~~~~~~~~~~--~~~~~ii~~h~~~~~~-~~---~-~~~~~~~~~~--~~~~~~~~~~e~~~~ 169 (479)
..+||+||+|+ .....++.++++. .++|+|++.|+..+.- .. + ..+....... ...++.....++...
T Consensus 128 ~~~~DiIh~~~---~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 1rzu_A 128 GWRPDMVHAHD---WQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGL 204 (485)
T ss_dssp SCCCSEEEEEH---HHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred CCCCCEEEecc---cchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHH
Confidence 36899999998 3333344455554 7899999999864210 00 0 0000000000 000000012367777
Q ss_pred hcCCEEEEeCHHHHHHHHHh-hC-----------CeEEEecCC-CCCCCCCCChH----------------HHHHHHHhh
Q 011690 170 KMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 220 (479)
Q Consensus 170 ~~ad~vi~vS~~~~~~l~~~-~~-----------~~~~vi~n~-~~~~f~~~~~~----------------~~~~~~~~~ 220 (479)
+.||.++++|+.+++.+.+. +| .++.+|||| +.+.|.+.... .+..+..
T Consensus 205 ~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-- 282 (485)
T 1rzu_A 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAE-- 282 (485)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHH--
T ss_pred hhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHH--
Confidence 88999999999999988764 33 249999999 77778765321 1222222
Q ss_pred hhcccCCCCccccccccccCCcccccchhccccccccccCCC-CCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhcc
Q 011690 221 NKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 299 (479)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~ 299 (479)
.++++++ ++ +++++||+.+.||++.+++|++.+.+
T Consensus 283 -----------------------------------~~~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~-------- 318 (485)
T 1rzu_A 283 -----------------------------------HFRIDDDGSP-LFCVISRLTWQKGIDLMAEAVDEIVS-------- 318 (485)
T ss_dssp -----------------------------------HHTCCCSSSC-EEEEESCBSTTTTHHHHHTTHHHHHH--------
T ss_pred -----------------------------------hcCCCCCCCe-EEEEEccCccccCHHHHHHHHHHHHh--------
Confidence 2345554 44 89999999999999999999999864
Q ss_pred CCCchhhhhHhhhccCcccCCCCEEEEEEecCC--ChHHHHHHHHHcCCCcEE-EecCCCCcchHHHHHHcCCEEEEccc
Q 011690 300 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHT 376 (479)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~--~~~~l~~~~~~~~l~~V~-f~G~~~~~~~~~~~l~~adi~v~p~~ 376 (479)
++++|+|+|+|+ ..+.+++.+++++ ++|. |.|. +.+++..+|++||++|+|
T Consensus 319 ---------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~p-- 372 (485)
T 1rzu_A 319 ---------------------LGGRLVVLGAGDVALEGALLAAASRHH-GRVGVAIGY--NEPLSHLMQAGCDAIIIP-- 372 (485)
T ss_dssp ---------------------TTCEEEEEECBCHHHHHHHHHHHHHTT-TTEEEEESC--CHHHHHHHHHHCSEEEEC--
T ss_pred ---------------------cCceEEEEeCCchHHHHHHHHHHHhCC-CcEEEecCC--CHHHHHHHHhcCCEEEEC--
Confidence 379999999996 4688888888876 7887 6774 667779999999999999
Q ss_pred CCCCCCCcHHHHHHHhCCCcEEEecCccchhccccC---------ccEEEe--CCHHHHHHHHHHHH---hcCCCCHHHH
Q 011690 377 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLF--SSSSELADQLLMLF---KGFPDDSDVL 442 (479)
Q Consensus 377 ~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~---------~~G~l~--~~~~~la~~l~~l~---~~~~~~~~~~ 442 (479)
|..|+||++++|||+||+|||+|+.|+++|++.++ .+|+++ .|+++|+++|.+++ + +++.+
T Consensus 373 -S~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~----~~~~~ 447 (485)
T 1rzu_A 373 -SRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYH----DPKLW 447 (485)
T ss_dssp -CSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHT----CHHHH
T ss_pred -cccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhC----CHHHH
Confidence 66799999999999999999999999999999998 899999 47999999999999 5 68999
Q ss_pred HHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHhh
Q 011690 443 KKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 476 (479)
Q Consensus 443 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 476 (479)
+++++++++ ..++|+...++ +..++++++++
T Consensus 448 ~~~~~~~~~--~~fs~~~~~~~-~~~~y~~~~~~ 478 (485)
T 1rzu_A 448 TQMQKLGMK--SDVSWEKSAGL-YAALYSQLISK 478 (485)
T ss_dssp HHHHHHHHT--CCCBHHHHHHH-HHHHHHHHTC-
T ss_pred HHHHHHHHH--HhCChHHHHHH-HHHHHHHhhCC
Confidence 999999986 47899887654 56677776653
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=288.59 Aligned_cols=269 Identities=13% Similarity=0.185 Sum_probs=210.2
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCC----cEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCC--
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRS----AFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMAN-- 173 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~----~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad-- 173 (479)
.+||+||+|++ .. ..+.++....++ +++..+|..... .... .+.+.+.+|
T Consensus 80 ~~~Div~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~------------~~~~~~~~~~~ 135 (413)
T 3oy2_A 80 HKPDIVMIYND---PI-VIGNYLLAMGKCSHRTKIVLYVDLVSKN--------IREN------------LWWIFSHPKVV 135 (413)
T ss_dssp HCCSEEEEEEC---HH-HHHHHHHHGGGCCSCCEEEEEECCCSBS--------CCGG------------GGGGGGCTTEE
T ss_pred cCCCEEEEcch---HH-HHHHHHHHhccCCCCCceeeeccccchh--------hHHH------------HHHHHhccCCc
Confidence 79999999962 22 233444445444 345566655310 0100 123457788
Q ss_pred EEEEeCHHHHHHHHHhhCC--eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhc
Q 011690 174 GCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 250 (479)
Q Consensus 174 ~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (479)
.++++|+.+++.+.+ ++. ++.+|||| +.+.| .. .+..
T Consensus 136 ~ii~~S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~--~~--~~~~----------------------------------- 175 (413)
T 3oy2_A 136 GVMAMSKCWISDICN-YGCKVPINIVSHFVDTKTI--YD--ARKL----------------------------------- 175 (413)
T ss_dssp EEEESSTHHHHHHHH-TTCCSCEEECCCCCCCCCC--TT--HHHH-----------------------------------
T ss_pred eEEEcCHHHHHHHHH-cCCCCceEEeCCCCCHHHH--HH--HHHh-----------------------------------
Confidence 999999999999988 564 49999999 66666 11 1111
Q ss_pred cccccccccCC-CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEe
Q 011690 251 SLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 329 (479)
Q Consensus 251 ~~~~~~~~~~~-~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG 329 (479)
+++++ .+..+++++||+.+.||++.+++|+..+.++ .|+++|+|+|
T Consensus 176 ------~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG 222 (413)
T 3oy2_A 176 ------VGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISK---------------------------YPDAKVRFLC 222 (413)
T ss_dssp ------TTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHH---------------------------CTTCCEEEEE
T ss_pred ------cCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHh---------------------------CCCcEEEEEe
Confidence 12222 1235899999999999999999999999876 8999999999
Q ss_pred cCCCh------HHHHHHHHHcCCC-c-------EEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC
Q 011690 330 KGPDK------ESYEEKIRRLRLK-R-------VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL 395 (479)
Q Consensus 330 ~G~~~------~~l~~~~~~~~l~-~-------V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~ 395 (479)
+|+.. +.+++.+++++++ + |.|.|. ++.+++..+|++||++|+| |..|+||++++|||+||+
T Consensus 223 ~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~-~~~~~~~~~~~~adv~v~p---S~~E~~~~~~lEAma~G~ 298 (413)
T 3oy2_A 223 NSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTV-LTDERVDMMYNACDVIVNC---SSGEGFGLCSAEGAVLGK 298 (413)
T ss_dssp ECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSC-CCHHHHHHHHHHCSEEEEC---CSCCSSCHHHHHHHTTTC
T ss_pred CCcccchhhHHHHHHHHHHHcCcccccccccceeeccCc-CCHHHHHHHHHhCCEEEeC---CCcCCCCcHHHHHHHcCC
Confidence 99865 8899999999994 4 888896 9999999999999999998 678999999999999999
Q ss_pred cEEEecCccchhccccCcc---------------EE--Ee--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hh
Q 011690 396 PVCAVSYSCIEELVKVDKN---------------GL--LF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LS 455 (479)
Q Consensus 396 PVIas~~~~~~e~i~~~~~---------------G~--l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~ 455 (479)
|||+|+.++.+|++.++.+ |+ ++ .|+++|+++| ++++ +++.++++++++++.. ..
T Consensus 299 PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~----~~~~~~~~~~~a~~~~~~~ 373 (413)
T 3oy2_A 299 PLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFK----DEKNRKEYGKRVQDFVKTK 373 (413)
T ss_dssp CEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTT----SHHHHHHHHHHHHHHHTTS
T ss_pred CEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhc----CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998887 88 87 5899999999 9999 6999999999998864 46
Q ss_pred hchHHHHHHHHHHHHHHHHh
Q 011690 456 ARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 456 ~~w~~~~~~~~~~~~~~~~~ 475 (479)
++|+...++ +..+++++++
T Consensus 374 fs~~~~~~~-~~~~~~~~~~ 392 (413)
T 3oy2_A 374 PTWDDISSD-IIDFFNSLLR 392 (413)
T ss_dssp CCHHHHHHH-HHHHHHHHTC
T ss_pred CCHHHHHHH-HHHHHHHHHh
Confidence 788877654 5666676654
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-33 Score=281.34 Aligned_cols=289 Identities=17% Similarity=0.113 Sum_probs=216.9
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011690 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (479)
Q Consensus 23 ~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~ 102 (479)
..+..|+++ ||+|+|++....... .+++++++.+ . ...+.+.+.+ .+|
T Consensus 38 ~l~~~L~~~-G~~v~v~~~~~~~~~-----~~~~~~~~~~----------~----~~~l~~~l~~------------~~~ 85 (342)
T 2iuy_A 38 NLMDGLLEL-GHEVFLLGAPGSPAG-----RPGLTVVPAG----------E----PEEIERWLRT------------ADV 85 (342)
T ss_dssp HHHHHHHHT-TCEEEEESCTTSCCC-----STTEEECSCC----------S----HHHHHHHHHH------------CCC
T ss_pred HHHHHHHHc-CCeEEEEecCCCCCC-----CCcceeccCC----------c----HHHHHHHHHh------------cCC
Confidence 345666664 999999997654322 2455543322 1 1123333333 799
Q ss_pred cEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHH
Q 011690 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAM 182 (479)
Q Consensus 103 DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 182 (479)
|+||+|++..... +++..++| |+++|+.... . ..+|.++++|+.+
T Consensus 86 Dvi~~~~~~~~~~------~~~~~~~p-v~~~h~~~~~--------~--------------------~~~d~ii~~S~~~ 130 (342)
T 2iuy_A 86 DVVHDHSGGVIGP------AGLPPGTA-FISSHHFTTR--------P--------------------VNPVGCTYSSRAQ 130 (342)
T ss_dssp SEEEECSSSSSCS------TTCCTTCE-EEEEECSSSB--------C--------------------SCCTTEEESCHHH
T ss_pred CEEEECCchhhHH------HHhhcCCC-EEEecCCCCC--------c--------------------ccceEEEEcCHHH
Confidence 9999999653321 14556899 9999987510 0 1189999999999
Q ss_pred HHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCC
Q 011690 183 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 261 (479)
Q Consensus 183 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (479)
++.+.+ ..++.+|||+ +.+.|.+... ..+
T Consensus 131 ~~~~~~--~~~~~vi~ngvd~~~~~~~~~------------------------------------------------~~~ 160 (342)
T 2iuy_A 131 RAHCGG--GDDAPVIPIPVDPARYRSAAD------------------------------------------------QVA 160 (342)
T ss_dssp HHHTTC--CTTSCBCCCCBCGGGSCCSTT------------------------------------------------CCC
T ss_pred HHHHhc--CCceEEEcCCCChhhcCcccc------------------------------------------------cCC
Confidence 988866 5568999999 6666654431 012
Q ss_pred CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHH
Q 011690 262 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 341 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~ 341 (479)
+++ .++++|++.+.||++.+++|++.+ +++|+|+|+|+..+.+++.+
T Consensus 161 ~~~-~i~~vG~~~~~Kg~~~li~a~~~~--------------------------------~~~l~i~G~g~~~~~l~~~~ 207 (342)
T 2iuy_A 161 KED-FLLFMGRVSPHKGALEAAAFAHAC--------------------------------GRRLVLAGPAWEPEYFDEIT 207 (342)
T ss_dssp CCS-CEEEESCCCGGGTHHHHHHHHHHH--------------------------------TCCEEEESCCCCHHHHHHHH
T ss_pred CCC-EEEEEeccccccCHHHHHHHHHhc--------------------------------CcEEEEEeCcccHHHHHHHH
Confidence 233 789999999999999999999864 48999999999999999999
Q ss_pred HHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCC-------CCCCCcHHHHHHHhCCCcEEEecCccchhcccc--C
Q 011690 342 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-------SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV--D 412 (479)
Q Consensus 342 ~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-------~~e~~p~~llEama~G~PVIas~~~~~~e~i~~--~ 412 (479)
++++ ++|.|+|. ++.+++..+|++||++|+|+... ..|++|++++|||+||+|||+|+.++.+|++++ +
T Consensus 208 ~~~~-~~v~~~g~-~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~ 285 (342)
T 2iuy_A 208 RRYG-STVEPIGE-VGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGE 285 (342)
T ss_dssp HHHT-TTEEECCC-CCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEE
T ss_pred HHhC-CCEEEecc-CCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCC
Confidence 9988 89999997 99999999999999999994311 179999999999999999999999999999999 9
Q ss_pred ccEEEeC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHh
Q 011690 413 KNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 413 ~~G~l~~-~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 475 (479)
.+|++++ |+++++++|.++++ .+..++.+.+ .++|+...++ +..+++++++
T Consensus 286 ~~g~~~~~d~~~l~~~i~~l~~--------~~~~~~~~~~---~~s~~~~~~~-~~~~~~~~~~ 337 (342)
T 2iuy_A 286 VVGYGTDFAPDEARRTLAGLPA--------SDEVRRAAVR---LWGHVTIAER-YVEQYRRLLA 337 (342)
T ss_dssp ECCSSSCCCHHHHHHHHHTSCC--------HHHHHHHHHH---HHBHHHHHHH-HHHHHHHHHT
T ss_pred CceEEcCCCHHHHHHHHHHHHH--------HHHHHHHHHH---hcCHHHHHHH-HHHHHHHHHc
Confidence 9999997 89999999988765 2233333333 6788776654 5566666654
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-30 Score=281.86 Aligned_cols=295 Identities=15% Similarity=0.108 Sum_probs=202.8
Q ss_pred CCcEEEEeCCCCcchHHHHHHHHHh-------cCCcEEEEecCchhh------hhhhhcCCCchhHHHHH---------H
Q 011690 101 SPDVFLVQNPPSVPTLVAVKWASSL-------RRSAFIVDWHNFGYT------LLSLSLGRRSHFVSIYR---------C 158 (479)
Q Consensus 101 ~~DvI~~~~p~~~~~~~~~~~~~~~-------~~~~~ii~~h~~~~~------~~~~~~~~~~~~~~~~~---------~ 158 (479)
.+||+|+|. +.+..+..+++.. .++|+|+|+|+..+. .+.. .+.......... +
T Consensus 153 ~ddIiH~hD---W~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 228 (536)
T 3vue_A 153 EDVVFVCND---WHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPE-LNLSERFRSSFDFIDGYDTPVE 228 (536)
T ss_dssp SCEEEEEES---GGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGG-GCCCGGGHHHHEEEETTTSTTC
T ss_pred CCEEEEECc---chHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhh-cCCchhhcchhhhhhccccccc
Confidence 467889998 5555555454432 378999999986421 0000 000000000000 0
Q ss_pred HhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCC-----------eEEEecCC-CCCCCCCCCh-------------HHH
Q 011690 159 FSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGI-----------KATVLYDQ-PPEFFHPTSL-------------EEK 213 (479)
Q Consensus 159 ~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~-----------~~~vi~n~-~~~~f~~~~~-------------~~~ 213 (479)
......++.....||.|++||+..++++.+.++. ++.+|+|| |.+.|.|... ..+
T Consensus 229 ~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K 308 (536)
T 3vue_A 229 GRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAK 308 (536)
T ss_dssp EEEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHH
T ss_pred ccchhHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhh
Confidence 0001125566678999999999999998775431 38999999 8888877421 111
Q ss_pred HHHHHhhhhcccCCCCccccccccccCCcccccchhcccccccccc--CCCCCeEEEEEecCCCCCCHHHHHHHHHHhHH
Q 011690 214 HELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDR 291 (479)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~ 291 (479)
..-...+. ..+++ .++.| +|+++||+.++||++.|++|+..+.+
T Consensus 309 ~~~k~~l~---------------------------------~~~gl~~d~~~p-~i~~vgRl~~~Kg~~~li~a~~~l~~ 354 (536)
T 3vue_A 309 ALNKEALQ---------------------------------AEAGLPVDRKIP-LIAFIGRLEEQKGPDVMAAAIPELMQ 354 (536)
T ss_dssp HHHHHHHH---------------------------------HHTTSCCCTTSC-EEEEECCBSGGGCHHHHHHHHHHHTT
T ss_pred HHHHHHHH---------------------------------HhcCCCCCCCCc-EEEEEeeccccCChHHHHHHHHHhHh
Confidence 11001111 11223 35566 89999999999999999999998853
Q ss_pred HHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh--HHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCC
Q 011690 292 RVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSAD 369 (479)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~--~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~ad 369 (479)
.+.+|+|+|.|+.. +.++..+..++ .+|.|.+. .+.+++..+|++||
T Consensus 355 -----------------------------~~~~l~l~G~G~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aD 403 (536)
T 3vue_A 355 -----------------------------EDVQIVLLGTGKKKFEKLLKSMEEKYP-GKVRAVVK-FNAPLAHLIMAGAD 403 (536)
T ss_dssp -----------------------------SSCEEEEECCBCHHHHHHHHHHHHHST-TTEEEECS-CCHHHHHHHHHHCS
T ss_pred -----------------------------hCCeEEEEeccCchHHHHHHHHHhhcC-CceEEEEe-ccHHHHHHHHHhhh
Confidence 35788888887643 33444444332 68999997 89999999999999
Q ss_pred EEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe------------CCHHHHHHHHHHHHhcCCC
Q 011690 370 LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF------------SSSSELADQLLMLFKGFPD 437 (479)
Q Consensus 370 i~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~------------~~~~~la~~l~~l~~~~~~ 437 (479)
++|+| |..|+||++++|||+||+|||+|+.||++|+|.++.+|+.+ .|+++|+++|.++++.+.
T Consensus 404 ~~v~P---S~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~- 479 (536)
T 3vue_A 404 VLAVP---SRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVG- 479 (536)
T ss_dssp EEEEC---CSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTT-
T ss_pred eeecc---cccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcC-
Confidence 99999 77799999999999999999999999999999999999954 247899999999887432
Q ss_pred CHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHH
Q 011690 438 DSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITE 472 (479)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 472 (479)
+ +.++++++++.+ ..++|+..-++. .+++.+
T Consensus 480 ~-~~~~~~~~~am~--~~fSW~~~A~~y-~~ly~~ 510 (536)
T 3vue_A 480 T-PAYEEMVRNCMN--QDLSWKGPAKNW-ENVLLG 510 (536)
T ss_dssp S-HHHHHHHHHHHH--SCCSSHHHHHHH-HHHHHT
T ss_pred c-HHHHHHHHHHHH--hcCCHHHHHHHH-HHHHHH
Confidence 3 446777777654 478887776553 344444
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-30 Score=258.00 Aligned_cols=309 Identities=15% Similarity=0.108 Sum_probs=209.7
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 011690 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (479)
Q Consensus 23 ~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~ 102 (479)
..+..|+++ ||+|+|++..+.. ........|++++.++....... .....+......+..+.. +..++ +..+|
T Consensus 25 ~la~~L~~~-G~~V~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-l~~~l-~~~~p 97 (364)
T 1f0k_A 25 AVAHHLMAQ-GWQVRWLGTADRM-EADLVPKHGIEIDFIRISGLRGK---GIKALIAAPLRIFNAWRQ-ARAIM-KAYKP 97 (364)
T ss_dssp HHHHHHHTT-TCEEEEEECTTST-HHHHGGGGTCEEEECCCCCCTTC---CHHHHHTCHHHHHHHHHH-HHHHH-HHHCC
T ss_pred HHHHHHHHc-CCEEEEEecCCcc-hhhhccccCCceEEecCCccCcC---ccHHHHHHHHHHHHHHHH-HHHHH-HhcCC
Confidence 456666665 9999999976532 11223345888888872111110 101111111111111111 11222 22699
Q ss_pred cEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHH
Q 011690 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAM 182 (479)
Q Consensus 103 DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 182 (479)
|+||++.+. ....+.++++..++|+|++.|+.. .. .. ++++.+.+|.+++.++..
T Consensus 98 Dvv~~~~~~---~~~~~~~~~~~~~~p~v~~~~~~~----------~~-------~~-----~~~~~~~~d~v~~~~~~~ 152 (364)
T 1f0k_A 98 DVVLGMGGY---VSGPGGLAAWSLGIPVVLHEQNGI----------AG-------LT-----NKWLAKIATKVMQAFPGA 152 (364)
T ss_dssp SEEEECSST---THHHHHHHHHHTTCCEEEEECSSS----------CC-------HH-----HHHHTTTCSEEEESSTTS
T ss_pred CEEEEeCCc---CchHHHHHHHHcCCCEEEEecCCC----------Cc-------HH-----HHHHHHhCCEEEecChhh
Confidence 999999843 123344566778999999888753 11 11 345567899999988764
Q ss_pred HHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccccccCC
Q 011690 183 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKP 261 (479)
Q Consensus 183 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (479)
++ ++.+++|+ +.+.|.+.. .+.. +++.+
T Consensus 153 -------~~-~~~~i~n~v~~~~~~~~~--~~~~-----------------------------------------~~~~~ 181 (364)
T 1f0k_A 153 -------FP-NAEVVGNPVRTDVLALPL--PQQR-----------------------------------------LAGRE 181 (364)
T ss_dssp -------SS-SCEECCCCCCHHHHTSCC--HHHH-----------------------------------------HTTCC
T ss_pred -------cC-CceEeCCccchhhcccch--hhhh-----------------------------------------cccCC
Confidence 23 57799998 444444322 1111 12344
Q ss_pred CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEE-EEEEecCCChHHHHHH
Q 011690 262 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDKESYEEK 340 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-l~IvG~G~~~~~l~~~ 340 (479)
+++.+++++|++.+.|+++.+++|+..+. . +++ ++++|+|+ .+.+++.
T Consensus 182 ~~~~il~~~g~~~~~k~~~~li~a~~~l~-----------------------------~-~~~~l~i~G~~~-~~~l~~~ 230 (364)
T 1f0k_A 182 GPVRVLVVGGSQGARILNQTMPQVAAKLG-----------------------------D-SVTIWHQSGKGS-QQSVEQA 230 (364)
T ss_dssp SSEEEEEECTTTCCHHHHHHHHHHHHHHG-----------------------------G-GEEEEEECCTTC-HHHHHHH
T ss_pred CCcEEEEEcCchHhHHHHHHHHHHHHHhc-----------------------------C-CcEEEEEcCCch-HHHHHHH
Confidence 55667778889999999999999999873 1 577 57899998 5788889
Q ss_pred HHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccch--------hccccC
Q 011690 341 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE--------ELVKVD 412 (479)
Q Consensus 341 ~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~--------e~i~~~ 412 (479)
++++++++|.|.|. + +++..+|++||++|+| | | |++++|||+||+|||+++.++.+ ++++++
T Consensus 231 ~~~~~~~~v~~~g~-~--~~~~~~~~~ad~~v~~---s-g---~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g 300 (364)
T 1f0k_A 231 YAEAGQPQHKVTEF-I--DDMAAAYAWADVVVCR---S-G---ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG 300 (364)
T ss_dssp HHHTTCTTSEEESC-C--SCHHHHHHHCSEEEEC---C-C---HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT
T ss_pred HhhcCCCceEEecc-h--hhHHHHHHhCCEEEEC---C-c---hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC
Confidence 99988888999997 5 8999999999999998 3 3 88999999999999999988764 466555
Q ss_pred ccEEEe--CC--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHH
Q 011690 413 KNGLLF--SS--SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEW 462 (479)
Q Consensus 413 ~~G~l~--~~--~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 462 (479)
.|+++ ++ +++|+++|.++ + ++.++++++++++....++|+...
T Consensus 301 -~g~~~~~~d~~~~~la~~i~~l-~-----~~~~~~~~~~~~~~~~~~~~~~~~ 347 (364)
T 1f0k_A 301 -AAKIIEQPQLSVDAVANTLAGW-S-----RETLLTMAERARAASIPDATERVA 347 (364)
T ss_dssp -SEEECCGGGCCHHHHHHHHHTC-C-----HHHHHHHHHHHHHTCCTTHHHHHH
T ss_pred -cEEEeccccCCHHHHHHHHHhc-C-----HHHHHHHHHHHHHhhccCHHHHHH
Confidence 59999 34 88999999888 3 889999999999866555554443
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=275.94 Aligned_cols=263 Identities=14% Similarity=0.148 Sum_probs=180.8
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHH-H------hcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWAS-S------LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMA 172 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~-~------~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~a 172 (479)
.++|+||+++ ..+...+..+. + ..+.|.+...|++..... .... .+.. ++..++.+
T Consensus 131 ~~~Dvv~a~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~----~~~~-----~~~~~~~~ 193 (413)
T 2x0d_A 131 AKHDIFIATA---WWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEPGFY-----QWSS----QYVL-----AESTYKYR 193 (413)
T ss_dssp CTTEEEEECS---HHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGGGGS-----CSSH----HHHH-----HHHTTSCC
T ss_pred CCCCEEEEeh---HHHHHHHHHhhhhhhhhcccccCcEEEEEeechhhcC-----ccCh----HHHH-----HHHHhccC
Confidence 5799999987 33333332221 0 124577776777642110 0111 1112 44445555
Q ss_pred C--EEEEeCHHHHHHHHHh-hCC-eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccc
Q 011690 173 N--GCLCVTQAMQHELAQN-WGI-KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADET 247 (479)
Q Consensus 173 d--~vi~vS~~~~~~l~~~-~~~-~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (479)
+ .++++|+.+++.+.+. ++. ++.+++|+ +.+.|.+..
T Consensus 194 ~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~~-------------------------------------- 235 (413)
T 2x0d_A 194 GPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYIN-------------------------------------- 235 (413)
T ss_dssp SCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTTT--------------------------------------
T ss_pred CceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhcccc--------------------------------------
Confidence 5 5899999999999875 332 37888888 433222110
Q ss_pred hhccccccccccCCCCCeEEEEEecC-CCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCC---E
Q 011690 248 IFTSLAGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR---L 323 (479)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~i~~~g~~-~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~ 323 (479)
...++. ..++++||+ .+.||++.+|+|++.+.++ +|+ +
T Consensus 236 ----------~~~~~~-~~il~~gr~~~~~Kg~~~li~A~~~l~~~---------------------------~~~~~~~ 277 (413)
T 2x0d_A 236 ----------DKRQKE-KIILVYGRPSVKRNAFTLIVEALKIFVQK---------------------------YDRSNEW 277 (413)
T ss_dssp ----------SCCCCC-SEEEEEECTTCGGGCHHHHHHHHHHHHHH---------------------------CTTGGGC
T ss_pred ----------cccCCC-CEEEEEecCchhccCHHHHHHHHHHHHHh---------------------------CCCCCce
Confidence 011223 367788886 6889999999999999875 664 9
Q ss_pred EEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 324 LFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 324 ~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
+|+|+|+|+.. .++++ ++|.|+|. ++.++++.+|++||++|+| |..|+||++++||||||+|||+++
T Consensus 278 ~l~ivG~~~~~-------~~l~~~~~v~f~G~-~~~~~l~~~~~~adv~v~p---S~~E~~g~~~lEAmA~G~PVV~~~- 345 (413)
T 2x0d_A 278 KIISVGEKHKD-------IALGKGIHLNSLGK-LTLEDYADLLKRSSIGISL---MISPHPSYPPLEMAHFGLRVITNK- 345 (413)
T ss_dssp EEEEEESCCCC-------EEEETTEEEEEEES-CCHHHHHHHHHHCCEEECC---CSSSSCCSHHHHHHHTTCEEEEEC-
T ss_pred EEEEEcCCchh-------hhcCCcCcEEEcCC-CCHHHHHHHHHhCCEEEEe---cCCCCCCcHHHHHHhCCCcEEEeC-
Confidence 99999999764 24566 68999997 9999999999999999999 666889999999999999999955
Q ss_pred ccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHhh
Q 011690 403 SCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 476 (479)
Q Consensus 403 ~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 476 (479)
+|..|+++++.+|+++ .|+++||++|.+++++ ++.+++ ++++....++|+...++ ...+.++.+|
T Consensus 346 ~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~----~~~~~~---~~~~~~~~~~W~~~~~~--~~~~~~l~~~ 412 (413)
T 2x0d_A 346 YENKDLSNWHSNIVSLEQLNPENIAETLVELCMS----FNNRDV---DKKESSNMMFYINEFNE--FSFIKEIEEK 412 (413)
T ss_dssp BTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHH----TC----------CCBSCGGGCCCC-----TTHHHHHTT
T ss_pred CCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcC----HHHHHH---hHHHHHHhCCHHHHHHH--HHHHHHHHhh
Confidence 5668999999999998 5799999999999995 555544 45554557888777654 5666666665
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=250.39 Aligned_cols=266 Identities=13% Similarity=0.065 Sum_probs=188.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+|++ ....+.+.++++..++|+|.+.|+.. + ......+. .++ .++.+.+.+|.++++|
T Consensus 94 ~~pDvv~~~~~--~~~~~~~~~~~~~~~ip~v~~~~~~~-~-----~~~~~~~~---~~~----~~~~~~~~~d~ii~~s 158 (375)
T 3beo_A 94 AKPDIVLVHGD--TTTTFIASLAAFYNQIPVGHVEAGLR-T-----WDKYSPYP---EEM----NRQLTGVMADLHFSPT 158 (375)
T ss_dssp HCCSEEEEETT--SHHHHHHHHHHHHTTCCEEEESCCCC-C-----SCTTSSTT---HHH----HHHHHHHHCSEEEESS
T ss_pred hCCCEEEEeCC--chHHHHHHHHHHHHCCCEEEEecccc-c-----ccccCCCh---hHh----hhhHHhhhhheeeCCC
Confidence 79999999974 23334445566778999987777542 0 00011111 111 1334556699999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCC--CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
+..++.+.+. |.+ +.+++|+ +...|.+... .+.++..
T Consensus 159 ~~~~~~~~~~-g~~~~~i~vi~n~~~d~~~~~~~~~-~~~~~~~------------------------------------ 200 (375)
T 3beo_A 159 AKSATNLQKE-NKDESRIFITGNTAIDALKTTVKET-YSHPVLE------------------------------------ 200 (375)
T ss_dssp HHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHCCSS-CCCHHHH------------------------------------
T ss_pred HHHHHHHHHc-CCCcccEEEECChhHhhhhhhhhhh-hhHHHHH------------------------------------
Confidence 9999988764 764 8899997 2222222110 0001100
Q ss_pred cccccCCCCCeEEEEEecCCCC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC
Q 011690 255 IDVFLKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 333 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~-K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~ 333 (479)
. + ++++.+++++||+.+. ||++.+++|++.+.++ +|++++++ |.|+.
T Consensus 201 -~--~-~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~~i~-~~g~~ 248 (375)
T 3beo_A 201 -K--L-GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDK---------------------------HEDVQVVY-PVHMN 248 (375)
T ss_dssp -T--T-TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHH---------------------------CTTEEEEE-ECCSC
T ss_pred -h--c-cCCCeEEEEecccccchhHHHHHHHHHHHHHhh---------------------------CCCeEEEE-eCCCC
Confidence 0 1 2345578899999876 9999999999999875 78899654 77765
Q ss_pred hHHHHHHHHHc-CC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-Cccchhccc
Q 011690 334 KESYEEKIRRL-RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVK 410 (479)
Q Consensus 334 ~~~l~~~~~~~-~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~~~e~i~ 410 (479)
+.+++.++++ +. ++|.|+|. ++..++..+|++||++|+| | |..++|||+||+|||+++ .++.+|+++
T Consensus 249 -~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~~---s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~ 318 (375)
T 3beo_A 249 -PVVRETANDILGDYGRIHLIEP-LDVIDFHNVAARSYLMLTD---S-----GGVQEEAPSLGVPVLVLRDTTERPEGIE 318 (375)
T ss_dssp -HHHHHHHHHHHTTCTTEEEECC-CCHHHHHHHHHTCSEEEEC---C-----HHHHHHHHHHTCCEEECSSCCSCHHHHH
T ss_pred -HHHHHHHHHHhhccCCEEEeCC-CCHHHHHHHHHhCcEEEEC---C-----CChHHHHHhcCCCEEEecCCCCCceeec
Confidence 3455555554 43 68999996 8888999999999999998 3 567999999999999996 488999998
Q ss_pred cCccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHH
Q 011690 411 VDKNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 469 (479)
Q Consensus 411 ~~~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 469 (479)
++ +|+++ .|+++|+++|.++++ |++.+++|++++++... ...|++++..+
T Consensus 319 ~g-~g~~v~~d~~~la~~i~~ll~----~~~~~~~~~~~~~~~~~----~~~~~~i~~~~ 369 (375)
T 3beo_A 319 AG-TLKLAGTDEETIFSLADELLS----DKEAHDKMSKASNPYGD----GRASERIVEAI 369 (375)
T ss_dssp TT-SEEECCSCHHHHHHHHHHHHH----CHHHHHHHCCCCCTTCC----SCHHHHHHHHH
T ss_pred CC-ceEEcCCCHHHHHHHHHHHHh----ChHhHhhhhhcCCCCCC----CcHHHHHHHHH
Confidence 87 99999 789999999999999 58899999888766433 34555544444
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-28 Score=253.15 Aligned_cols=325 Identities=12% Similarity=0.067 Sum_probs=207.1
Q ss_pred ceEEEEEecCC--CCChhHHHHHHHHHhhCCCcEEEEecCCCCC--------------cccccCCCCeEEEEeecCCCCC
Q 011690 5 GRACVVVLGDL--GRSPRMQYQALSLARQMSLEVDVVAYGGSKP--------------HAAILEHPSIHIHTMTQWPTIP 68 (479)
Q Consensus 5 ~~~~i~~~~~~--g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~--------------~~~~~~~~gi~i~~~~~~~~~~ 68 (479)
++++++...++ +..+...+.+..|+++ | +|+|++...... .......+|+++++.+....+.
T Consensus 15 MkIl~is~~~~p~~~~~~~~~l~~~l~~~-G-~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~ 92 (406)
T 2hy7_A 15 PCYLVLSSHDFRTPRRANIHFITDQLALR-G-TTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVDCYLWRTTVHPF 92 (406)
T ss_dssp SCEEEEESSCTTSSSCCHHHHHHHHHHHH-S-CEEEEECSCBTTHHHHTCTTGGGGGGTTSEEEETTEEEEECCBSSCCC
T ss_pred ceEEEEecccCCChhhhhHhHHHHHHHhC-C-ceEEEEecccHHHHhhccchhhhhccCccceecCCeEEEeeccccCCc
Confidence 34555553212 2334455667778886 9 999996432100 0011124688888765211111
Q ss_pred CCCCchhHHHHHHH-HHH-HHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchh-hhhhhh
Q 011690 69 RGLPKVLKPVLLLL-KPL-IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGY-TLLSLS 145 (479)
Q Consensus 69 ~~~~~~~~~~~~l~-~~l-~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~-~~~~~~ 145 (479)
.......+.+.... ... ..+...+..+. .++|+||.++ .....++. +++..++|+++++|+... ...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~DvIh~~~---~~~~~~~~-~~~~~~~p~v~~~h~~~~~~~~--- 162 (406)
T 2hy7_A 93 NTRRSWLRPVEDAMFRWYAAHPPKQLLDWM---RESDVIVFES---GIAVAFIE-LAKRVNPAAKLVYRASDGLSTI--- 162 (406)
T ss_dssp CCCCGGGHHHHHHHHHHHHHCCCHHHHHHH---HHCSEEEEES---SGGGGGHH-HHHHHCTTSEEEEEESSCHHHH---
T ss_pred cccchhhhccchhHHHHHHHhHHHHHHHHh---cCCCEEEECC---chHHHHHH-HHHHhCCCEEEEEeccchhhcc---
Confidence 11111112221100 000 00011111111 3789999554 22221122 334568999999997532 100
Q ss_pred cCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeCHHHHHHHHHhhCCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcc
Q 011690 146 LGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKIL 224 (479)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~ 224 (479)
. . ....++. ++..++.+|.++++|+.+++.+.+. + ++.+|||| +.+.|.+...
T Consensus 163 -~-~---~~~~~~~-----~~~~~~~ad~vi~~S~~~~~~~~~~-~-~i~vipngvd~~~f~~~~~-------------- 216 (406)
T 2hy7_A 163 -N-V---ASYIERE-----FDRVAPTLDVIALVSPAMAAEVVSR-D-NVFHVGHGVDHNLDQLGDP-------------- 216 (406)
T ss_dssp -T-C---CHHHHHH-----HHHHGGGCSEEEESCGGGGGGCSCS-T-TEEECCCCBCTTHHHHHCS--------------
T ss_pred -c-c---cHHHHHH-----HHHHHHhCCEEEEcCHHHHHHHHhc-C-CEEEEcCCcChHhcCcccc--------------
Confidence 0 1 1222333 6777889999999999999887654 4 89999999 6554432210
Q ss_pred cCCCCccccccccccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCch
Q 011690 225 HQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 304 (479)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~ 304 (479)
.+.++..+++++|++.+.||+ +..+.++
T Consensus 217 ----------------------------------~~~~~~~~i~~vGrl~~~Kg~------~~~l~~~------------ 244 (406)
T 2hy7_A 217 ----------------------------------SPYAEGIHAVAVGSMLFDPEF------FVVASKA------------ 244 (406)
T ss_dssp ----------------------------------CSCCSSEEEEEECCTTBCHHH------HHHHHHH------------
T ss_pred ----------------------------------cccCCCcEEEEEeccccccCH------HHHHHHh------------
Confidence 011222489999999999998 3333343
Q ss_pred hhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCC
Q 011690 305 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDL 383 (479)
Q Consensus 305 ~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~ 383 (479)
.|+++|+|+|+|+ ++++++ ++|.|+|. ++.++++.+|++||++|+| |..|++
T Consensus 245 ---------------~~~~~l~ivG~g~--------~~~~~l~~~V~f~G~-~~~~~l~~~~~~adv~v~p---s~~E~~ 297 (406)
T 2hy7_A 245 ---------------FPQVTFHVIGSGM--------GRHPGYGDNVIVYGE-MKHAQTIGYIKHARFGIAP---YASEQV 297 (406)
T ss_dssp ---------------CTTEEEEEESCSS--------CCCTTCCTTEEEECC-CCHHHHHHHHHTCSEEECC---BSCSCC
T ss_pred ---------------CCCeEEEEEeCch--------HHhcCCCCCEEEcCC-CCHHHHHHHHHhcCEEEEC---CCcccC
Confidence 7899999999997 556677 78999997 9999999999999999999 566889
Q ss_pred cHHHHHHH-------hCCCcEEEecCccchhccccCccEEE-e--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 384 PMKVVDMF-------GCGLPVCAVSYSCIEELVKVDKNGLL-F--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 384 p~~llEam-------a~G~PVIas~~~~~~e~i~~~~~G~l-~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
|++++||| |||+|||+|+. +.++.+|++ + +|+++|+++|.+++++ ++ + +..
T Consensus 298 ~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d~~~la~ai~~ll~~----~~-----~----~~~ 358 (406)
T 2hy7_A 298 PVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGNADSVIAAITQALEA----PR-----V----RYR 358 (406)
T ss_dssp CTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTCHHHHHHHHHHHHHC----CC-----C----CCS
T ss_pred chHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCCHHHHHHHHHHHHhC----cc-----h----hhh
Confidence 99999999 99999999987 667889999 7 6799999999999995 32 1 223
Q ss_pred hhhchHHHHHHH
Q 011690 454 LSARWATEWEEH 465 (479)
Q Consensus 454 ~~~~w~~~~~~~ 465 (479)
..++|+..-++.
T Consensus 359 ~~~sw~~~a~~~ 370 (406)
T 2hy7_A 359 QCLNWSDTTDRV 370 (406)
T ss_dssp CCCBHHHHHHHH
T ss_pred hcCCHHHHHHHH
Confidence 467776665543
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-28 Score=245.16 Aligned_cols=266 Identities=14% Similarity=0.094 Sum_probs=185.9
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+|++. ...+.+.++++..++|++.+.|+... ......+. ... ....+.+.+|.++++|
T Consensus 85 ~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~~~------~~~~~~~~---~~~----~~~~~~~~~d~ii~~s 149 (384)
T 1vgv_A 85 FKPDVVLVHGDT--TTTLATSLAAFYQRIPVGHVEAGLRT------GDLYSPWP---EEA----NRTLTGHLAMYHFSPT 149 (384)
T ss_dssp HCCSEEEEETTC--HHHHHHHHHHHTTTCCEEEESCCCCC------SCTTSSTT---HHH----HHHHHHTTCSEEEESS
T ss_pred hCCCEEEEeCCc--hHHHHHHHHHHHHCCCEEEEeccccc------ccccCCCc---hHh----hHHHHHhhccEEEcCc
Confidence 799999999731 22334445667789999988887531 00001111 111 0223456799999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCC-CCCC-CCCCC----hHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQ-PPEF-FHPTS----LEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 250 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~-~~~~-f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (479)
+..++.+.+ +|.+ +.+++|+ .... +.+.. ...+.++
T Consensus 150 ~~~~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~---------------------------------- 194 (384)
T 1vgv_A 150 ETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSEL---------------------------------- 194 (384)
T ss_dssp HHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHH----------------------------------
T ss_pred HHHHHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHH----------------------------------
Confidence 999998865 4764 8889987 2111 11000 0000011
Q ss_pred cccccccc-cCCCCCeEEEEEecCCCC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE
Q 011690 251 SLAGIDVF-LKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT 328 (479)
Q Consensus 251 ~~~~~~~~-~~~~~~~~i~~~g~~~~~-K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv 328 (479)
+..++ ++++++.+++++||+.+. ||++.+++|+..+.++ .|+++|+++
T Consensus 195 ---~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l~i~ 244 (384)
T 1vgv_A 195 ---AANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYP 244 (384)
T ss_dssp ---HTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEE
T ss_pred ---HHhccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhh---------------------------CCCeEEEEE
Confidence 11233 434556688899999876 9999999999999876 789999886
Q ss_pred -ecCC-ChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC-ccc
Q 011690 329 -GKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCI 405 (479)
Q Consensus 329 -G~G~-~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~-~~~ 405 (479)
|.|+ ..+.+++.+. ..++|.|+|. ++.+++..+|++||++|+| | |..++|||+||+|||+++. ++.
T Consensus 245 ~g~~~~~~~~l~~~~~--~~~~v~~~g~-~~~~~~~~~~~~ad~~v~~---S-----g~~~lEA~a~G~PvI~~~~~~~~ 313 (384)
T 1vgv_A 245 VHLNPNVREPVNRILG--HVKNVILIDP-QEYLPFVWLMNHAWLILTD---S-----GGIQEEAPSLGKPVLVMRDTTER 313 (384)
T ss_dssp CCBCHHHHHHHHHHHT--TCTTEEEECC-CCHHHHHHHHHHCSEEEES---S-----STGGGTGGGGTCCEEEESSCCSC
T ss_pred cCCCHHHHHHHHHHhh--cCCCEEEeCC-CCHHHHHHHHHhCcEEEEC---C-----cchHHHHHHcCCCEEEccCCCCc
Confidence 5443 3344444332 1368999996 8889999999999999998 3 2248999999999999986 899
Q ss_pred hhccccCccEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHH
Q 011690 406 EELVKVDKNGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE 461 (479)
Q Consensus 406 ~e~i~~~~~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 461 (479)
+|+++++ +|+++ .|+++|+++|.++++ |++.+++|++++++....++|+..
T Consensus 314 ~e~v~~g-~g~lv~~d~~~la~~i~~ll~----d~~~~~~~~~~~~~~~~~~~~~~i 365 (384)
T 1vgv_A 314 PEAVTAG-TVRLVGTDKQRIVEEVTRLLK----DENEYQAMSRAHNPYGDGQACSRI 365 (384)
T ss_dssp HHHHHHT-SEEEECSSHHHHHHHHHHHHH----CHHHHHHHHSSCCTTCCSCHHHHH
T ss_pred chhhhCC-ceEEeCCCHHHHHHHHHHHHh----ChHHHhhhhhccCCCcCCCHHHHH
Confidence 9999888 99999 589999999999999 588999999888765434444433
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-27 Score=251.13 Aligned_cols=263 Identities=13% Similarity=0.079 Sum_probs=194.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||.++....... ++.++ ....|++++||++.... .. .+ ..+..+|.++++|
T Consensus 281 ~~~Div~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~---------~~----~~--------~~~~~~d~~i~~s 336 (568)
T 2vsy_A 281 HGIDLLFDLRGWGGGGR-PEVFA--LRPAPVQVNWLAYPGTS---------GA----PW--------MDYVLGDAFALPP 336 (568)
T ss_dssp TTCSEEEECSSCTTCSS-CHHHH--TCCSSEEEEESSSSSCC---------CC----TT--------CCEEEECTTTSCT
T ss_pred CCCCEEEECCCCCCcch-HHHHh--cCCCceeEeeecCCccc---------CC----CC--------ceEEEECCCcCCc
Confidence 89999998764322211 12222 23568888888754110 00 00 1123588889999
Q ss_pred HHHHHHHHHhhCCeEEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccccccc
Q 011690 180 QAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDVFL 259 (479)
Q Consensus 180 ~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (479)
+...+ ++.++.+|||. |.+........ .. ..+..+++
T Consensus 337 ~~~~~-----~~~~i~~ipn~----~~~~~~~~~~~------------------------------~~----~~r~~~~~ 373 (568)
T 2vsy_A 337 ALEPF-----YSEHVLRLQGA----FQPSDTSRVVA------------------------------EP----PSRTQCGL 373 (568)
T ss_dssp TTGGG-----CSSEEEECSSC----SCCCCTTCCCC------------------------------CC----CCTGGGTC
T ss_pred ccccC-----CcceeEcCCCc----CCCCCCCCCCC------------------------------CC----CCccccCC
Confidence 87653 45668999984 32221000000 00 02234455
Q ss_pred CCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEe-cCCChHHHH
Q 011690 260 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYE 338 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG-~G~~~~~l~ 338 (479)
+++. +++++|++.+ ||++.+++|+..+.++ .|+++|+|+| +|+..+.++
T Consensus 374 ~~~~--~v~~~g~~~~-K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~g~~~~~l~ 423 (568)
T 2vsy_A 374 PEQG--VVLCCFNNSY-KLNPQSMARMLAVLRE---------------------------VPDSVLWLLSGPGEADARLR 423 (568)
T ss_dssp CTTS--CEEEECCCGG-GCCHHHHHHHHHHHHH---------------------------CTTCEEEEECCSTTHHHHHH
T ss_pred CCCC--EEEEeCCccc-cCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCHHHHHHHH
Confidence 4443 4559999999 9999999999999876 8999999999 999999999
Q ss_pred HHHHHcCC--CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEE-------ecCc------
Q 011690 339 EKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA-------VSYS------ 403 (479)
Q Consensus 339 ~~~~~~~l--~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIa-------s~~~------ 403 (479)
+.++++|+ ++|.|+|. ++.+++..+|+.||++|+| |.. ++|++++|||+||+|||+ |+.+
T Consensus 424 ~~~~~~~l~~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~ 498 (568)
T 2vsy_A 424 AFAHAQGVDAQRLVFMPK-LPHPQYLARYRHADLFLDT---HPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH 498 (568)
T ss_dssp HHHHHTTCCGGGEEEECC-CCHHHHHHHGGGCSEEECC---SSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH
T ss_pred HHHHHcCCChhHEEeeCC-CCHHHHHHHHhcCCEEeeC---CCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH
Confidence 99999998 47999997 9999999999999999998 544 899999999999999999 9999
Q ss_pred -cchhccccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh---hhhchHHHHHHHHHHHHHHHHhhc
Q 011690 404 -CIEELVKVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG---LSARWATEWEEHAKPLITEVISQF 477 (479)
Q Consensus 404 -~~~e~i~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~w~~~~~~~~~~~~~~~~~~~ 477 (479)
|.+|++.+ |++++++++.++++ |++.++.|++++++.. ..++|+...+ .+..+++++++++
T Consensus 499 ~g~~e~v~~--------~~~~la~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 499 LGLDEMNVA--------DDAAFVAKAVALAS----DPAALTALHARVDVLRRASGVFHMDGFAD-DFGALLQALARRH 563 (568)
T ss_dssp HTCGGGBCS--------SHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHSSTTCHHHHHH-HHHHHHHHHHHTT
T ss_pred CCChhhhcC--------CHHHHHHHHHHHhc----CHHHHHHHHHHHHHhhhcCCCCCHHHHHH-HHHHHHHHHHHHH
Confidence 99998855 89999999999999 6999999999988754 5688877765 4566777776653
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=202.12 Aligned_cols=160 Identities=13% Similarity=0.267 Sum_probs=140.6
Q ss_pred CeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHHHHHH
Q 011690 264 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 343 (479)
Q Consensus 264 ~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~~~~~ 343 (479)
|.+|+++|++.+.||++.+++|+..+++ .|+++|+|+|+|+..+.+++.+++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~~~l~i~G~g~~~~~~~~~~~~ 53 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY----------------------------KQDIVLLLKGKGPDEKKIKLLAQK 53 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT----------------------------GGGEEEEEECCSTTHHHHHHHHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc----------------------------CCCeEEEEEeCCccHHHHHHHHHH
Confidence 4689999999999999999999998842 578999999999999999999999
Q ss_pred cCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC-cEEE-ecCccchhccccCccEEEeCCH
Q 011690 344 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-PVCA-VSYSCIEELVKVDKNGLLFSSS 421 (479)
Q Consensus 344 ~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~-PVIa-s~~~~~~e~i~~~~~G~l~~~~ 421 (479)
+++ +|.| |. ++.+++..+|++||++|+| |..|++|++++|||+||+ |||+ ++.++..+++.++.+.+...|+
T Consensus 54 ~~~-~v~~-g~-~~~~~~~~~~~~adv~v~p---s~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~ 127 (166)
T 3qhp_A 54 LGV-KAEF-GF-VNSNELLEILKTCTLYVHA---ANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNA 127 (166)
T ss_dssp HTC-EEEC-CC-CCHHHHHHHHTTCSEEEEC---CCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGGEECTTCH
T ss_pred cCC-eEEE-ee-cCHHHHHHHHHhCCEEEEC---CcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCceEEcCCCH
Confidence 987 8999 96 9999999999999999999 667999999999999998 9999 4688999999888774444789
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHH
Q 011690 422 SELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATE 461 (479)
Q Consensus 422 ~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 461 (479)
++++++|.++++ +++.++.+++++++....++|+..
T Consensus 128 ~~l~~~i~~l~~----~~~~~~~~~~~~~~~~~~~s~~~~ 163 (166)
T 3qhp_A 128 KDLSAKIDWWLE----NKLERERMQNEYAKSALNYTLENS 163 (166)
T ss_dssp HHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHCChhhh
Confidence 999999999999 699999999999986667777654
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-24 Score=232.25 Aligned_cols=340 Identities=15% Similarity=0.078 Sum_probs=213.1
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHH-hcCCcEEEEecCchhhhhhhhcCCCch---hHH------HH--HHHhHHHHHHH
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSH---FVS------IY--RCFSVLRIEKY 167 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~-~~~~~~ii~~h~~~~~~~~~~~~~~~~---~~~------~~--~~~~~~~~e~~ 167 (479)
.+||++|+|. +.+..+..+++. ..++|+|+|.|+..+...-...+.... +.. .. ..+.....|+.
T Consensus 180 ~~pdIiH~HD---W~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKa 256 (725)
T 3nb0_A 180 QHAIVAHFHE---WLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERA 256 (725)
T ss_dssp SEEEEEEEES---GGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcEEEeCc---hhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHH
Confidence 4599999999 766666666654 558999999998742111000010000 000 00 00011234788
Q ss_pred HhhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCC-CCCCCCCCChH--HHHHHHHhhhhcccCCCCccccccccccCCcc
Q 011690 168 YGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLE--EKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 243 (479)
Q Consensus 168 ~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (479)
....||.++|||+.+++++...++.+ -.+|+|| +.+.|.|.... .+.....++...
T Consensus 257 ga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~-------------------- 316 (725)
T 3nb0_A 257 AAHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDF-------------------- 316 (725)
T ss_dssp HHHHSSEEEESSHHHHHHHHHHTSSCCSEECCCCBCCCCCSSTTHHHHHHHHHHHHHHHH--------------------
T ss_pred HHHhCCEEEECCHHHHHHHHHHhcCCCCEEEcCCccccccCcchhhHHHHHHHHHHHHHH--------------------
Confidence 88899999999999999998877665 3449999 88999886321 111111121100
Q ss_pred cccchhccccccccccCCCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccCC----------C----------
Q 011690 244 ADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDD----------S---------- 302 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~~----------~---------- 302 (479)
++.-..+.+++.+++..++..+||++ .+||++.+++|+..+..++... +.+- -
T Consensus 317 -----l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~-~~~~~vvafii~p~~~~~~~~~~l~ 390 (725)
T 3nb0_A 317 -----VRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVS-GSKKTVVAFIVMPAKNNSFTVEALK 390 (725)
T ss_dssp -----HHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHT-TCCCEEEEEEECCCCEEEECHHHHH
T ss_pred -----HHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhc-cCCCcEEEEEEeCCCCCCCchhhhc
Confidence 00001112234444555677789999 7899999999999998763221 0000 0
Q ss_pred ----------------------------------------chhhhhHhh------------hccCcccCCCCE-EEEEEe
Q 011690 303 ----------------------------------------TNEEVFLKE------------ISDGKQYLYPRL-LFIITG 329 (479)
Q Consensus 303 ----------------------------------------~~~~~~~~~------------~~~~~~~~~p~~-~l~IvG 329 (479)
++.++.+.. .++-. ...|.+ .-.++
T Consensus 391 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~-~~lpp~~TH~~~- 468 (725)
T 3nb0_A 391 GQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPE-GQLPPIVTHNMV- 468 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCT-TCCCCSBSEEET-
T ss_pred chhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCC-CCCCCeeeeecc-
Confidence 011111110 00000 011111 11111
Q ss_pred cCCChHHHHHHHHHcCC-Cc------EEEecCCCCcc------hHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCc
Q 011690 330 KGPDKESYEEKIRRLRL-KR------VAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP 396 (479)
Q Consensus 330 ~G~~~~~l~~~~~~~~l-~~------V~f~G~~~~~~------~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~P 396 (479)
....+.+...++++++ ++ |.|.+.|++.+ ++.++|+.||++|+| |..|+||++++||||||+|
T Consensus 469 -~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~P---S~~EgfGl~~LEAmA~G~P 544 (725)
T 3nb0_A 469 -DDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFP---SYYEPWGYTPAECTVMGVP 544 (725)
T ss_dssp -TGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECC---CSSBSSCHHHHHHHHTTCC
T ss_pred -cCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEec---cccCCCCHHHHHHHHcCCC
Confidence 1234567777888887 43 78888789887 599999999999999 7789999999999999999
Q ss_pred EEEecCccchhccccC-------ccEEEeC-----CHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHhhhhhchHHHHH
Q 011690 397 VCAVSYSCIEELVKVD-------KNGLLFS-----SSSELADQLLMLFKGFP-DDSDVLKKLRNGTLEMGLSARWATEWE 463 (479)
Q Consensus 397 VIas~~~~~~e~i~~~-------~~G~l~~-----~~~~la~~l~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~w~~~~~ 463 (479)
||+|+.+|.+|.+.++ .+|+++. ++++++++|.+++..+- .++..+..++++++++...++|+...+
T Consensus 545 vI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~ 624 (725)
T 3nb0_A 545 SITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGL 624 (725)
T ss_dssp EEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHH
T ss_pred EEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999998875 3698772 35555555544443110 167888999999998888899988876
Q ss_pred HHHHHHHHHHHh
Q 011690 464 EHAKPLITEVIS 475 (479)
Q Consensus 464 ~~~~~~~~~~~~ 475 (479)
++ ..++++++.
T Consensus 625 ~Y-l~~Ye~aL~ 635 (725)
T 3nb0_A 625 EY-VKARQLALR 635 (725)
T ss_dssp HH-HHHHHHHHH
T ss_pred HH-HHHHHHHHh
Confidence 54 445566553
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-25 Score=224.68 Aligned_cols=265 Identities=15% Similarity=0.091 Sum_probs=180.2
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEEEEeC
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGCLCVT 179 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 179 (479)
.+||+||+|+++ ...+.+.++++..++|++...|+.. + ......+.. ... ++.+.+.+|.++++|
T Consensus 90 ~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~~-~-----~~~~~~~~~--~~~-----~~~~~~~~~~~~~~s 154 (376)
T 1v4v_A 90 MGADYVLVHGDT--LTTFAVAWAAFLEGIPVGHVEAGLR-S-----GNLKEPFPE--EAN-----RRLTDVLTDLDFAPT 154 (376)
T ss_dssp TTCSEEEEESSC--HHHHHHHHHHHHTTCCEEEETCCCC-C-----SCTTSSTTH--HHH-----HHHHHHHCSEEEESS
T ss_pred cCCCEEEEeCCh--HHHHHHHHHHHHhCCCEEEEeCCCc-c-----ccccCCCch--HHH-----HHHHHHHhceeeCCC
Confidence 799999999742 2333445567778999764333321 0 000011111 111 345556799999999
Q ss_pred HHHHHHHHHhhCCe---EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccccc
Q 011690 180 QAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGID 256 (479)
Q Consensus 180 ~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (479)
+..++.+.+. |++ +.+++|+..+.+... . .. .. .+..
T Consensus 155 ~~~~~~l~~~-g~~~~ki~vi~n~~~d~~~~~---~-~~--~~---------------------------------~~~~ 194 (376)
T 1v4v_A 155 PLAKANLLKE-GKREEGILVTGQTGVDAVLLA---A-KL--GR---------------------------------LPEG 194 (376)
T ss_dssp HHHHHHHHTT-TCCGGGEEECCCHHHHHHHHH---H-HH--CC---------------------------------CCTT
T ss_pred HHHHHHHHHc-CCCcceEEEECCchHHHHhhh---h-hh--hH---------------------------------HHHh
Confidence 9999988765 764 778887511111000 0 00 00 0111
Q ss_pred cccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE-ecCC-Ch
Q 011690 257 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP-DK 334 (479)
Q Consensus 257 ~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv-G~G~-~~ 334 (479)
+ ++++.+++++||+...||++.+++|++.+.++ +|+++++++ |+|+ ..
T Consensus 195 --~-~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~lv~~~g~~~~~~ 244 (376)
T 1v4v_A 195 --L-PEGPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHLNPVVR 244 (376)
T ss_dssp --C-CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCSCHHHH
T ss_pred --c-CCCCEEEEEeCcccchHHHHHHHHHHHHHHhh---------------------------CCCeEEEEECCCCHHHH
Confidence 1 13455778899998888999999999999775 788998886 7665 45
Q ss_pred HHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe-cCccchhccccCc
Q 011690 335 ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDK 413 (479)
Q Consensus 335 ~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas-~~~~~~e~i~~~~ 413 (479)
+.+++.+. ..++|.|+|. +...++..+|++||++|+| | + + .++|||+||+|||++ +.++..++++++
T Consensus 245 ~~l~~~~~--~~~~v~~~g~-~g~~~~~~~~~~ad~~v~~---S--~--g-~~lEA~a~G~PvI~~~~~~~~~~~~~~g- 312 (376)
T 1v4v_A 245 EAVFPVLK--GVRNFVLLDP-LEYGSMAALMRASLLLVTD---S--G--G-LQEEGAALGVPVVVLRNVTERPEGLKAG- 312 (376)
T ss_dssp HHHHHHHT--TCTTEEEECC-CCHHHHHHHHHTEEEEEES---C--H--H-HHHHHHHTTCCEEECSSSCSCHHHHHHT-
T ss_pred HHHHHHhc--cCCCEEEECC-CCHHHHHHHHHhCcEEEEC---C--c--C-HHHHHHHcCCCEEeccCCCcchhhhcCC-
Confidence 55655543 2368999986 7777999999999999987 3 2 2 378999999999998 478888987654
Q ss_pred cEEEe-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHH
Q 011690 414 NGLLF-SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPL 469 (479)
Q Consensus 414 ~G~l~-~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 469 (479)
+|+++ .|+++|+++|.++++ |++.+++|++++. .+.|...++++++.+
T Consensus 313 ~g~lv~~d~~~la~~i~~ll~----d~~~~~~~~~~~~----~~~~~~~~~~i~~~i 361 (376)
T 1v4v_A 313 ILKLAGTDPEGVYRVVKGLLE----NPEELSRMRKAKN----PYGDGKAGLMVARGV 361 (376)
T ss_dssp SEEECCSCHHHHHHHHHHHHT----CHHHHHHHHHSCC----SSCCSCHHHHHHHHH
T ss_pred ceEECCCCHHHHHHHHHHHHh----ChHhhhhhcccCC----CCCCChHHHHHHHHH
Confidence 89999 789999999999999 5888888886443 345555555544433
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=200.12 Aligned_cols=151 Identities=20% Similarity=0.252 Sum_probs=138.3
Q ss_pred EEEEEecCC-CCCCHHHHHHHHHHhH--HHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC--ChHHHHHH
Q 011690 266 LVVSSTSWT-PDEDFGILLEAALMYD--RRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEK 340 (479)
Q Consensus 266 ~i~~~g~~~-~~K~~~~lieA~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~--~~~~l~~~ 340 (479)
+++++|++. +.||++.+++|+..+. ++ .|+++|+|+|.|+ ..+.+++.
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~---------------------------~~~~~l~i~G~~~~~~~~~l~~~ 90 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKE---------------------------FQEMRFIIIGKGDPELEGWARSL 90 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGG---------------------------GGGEEEEEECCBCHHHHHHHHHH
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhcc---------------------------CCCeEEEEECCCChHHHHHHHHH
Confidence 899999999 9999999999999986 43 6899999999999 88899999
Q ss_pred HHHcCCCcEEE-ecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEeC
Q 011690 341 IRRLRLKRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 419 (479)
Q Consensus 341 ~~~~~l~~V~f-~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~~ 419 (479)
+++++ +|.| .|. ++.+++..+|+.||++|+| +..+++|++++|||+||+|||+++.++..|++ ++.+|++++
T Consensus 91 ~~~~~--~v~~~~g~-~~~~~~~~~~~~ad~~l~p---s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~ 163 (200)
T 2bfw_A 91 EEKHG--NVKVITEM-LSREFVRELYGSVDFVIIP---SYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVK 163 (200)
T ss_dssp HHHCT--TEEEECSC-CCHHHHHHHHTTCSEEEEC---CSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEEC
T ss_pred HHhcC--CEEEEecc-CCHHHHHHHHHHCCEEEEC---CCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEec
Confidence 99887 8999 997 9999999999999999998 55689999999999999999999999999999 999999994
Q ss_pred --CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 420 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 420 --~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
++++++++|.++++. +++.++++++++++..
T Consensus 164 ~~~~~~l~~~i~~l~~~---~~~~~~~~~~~a~~~~ 196 (200)
T 2bfw_A 164 AGDPGELANAILKALEL---SRSDLSKFRENCKKRA 196 (200)
T ss_dssp TTCHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 899999999999992 3889999999998843
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.8e-24 Score=217.98 Aligned_cols=198 Identities=17% Similarity=0.127 Sum_probs=152.0
Q ss_pred HHHHhhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcc
Q 011690 165 EKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQK 243 (479)
Q Consensus 165 e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (479)
.+.+++.+|.++++|+.+++.+.+. |++ +.+++|+. |.+.... +.
T Consensus 147 ~~~~~~~~d~ii~~S~~~~~~l~~~-g~~ki~vi~n~~---f~~~~~~-~~----------------------------- 192 (374)
T 2xci_A 147 EKILSKKFDLIIMRTQEDVEKFKTF-GAKRVFSCGNLK---FICQKGK-GI----------------------------- 192 (374)
T ss_dssp HHHHHTTCSEEEESCHHHHHHHHTT-TCCSEEECCCGG---GCCCCCS-CC-----------------------------
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHc-CCCeEEEcCCCc---cCCCcCh-hh-----------------------------
Confidence 4455678999999999999988765 765 88999862 2221100 00
Q ss_pred cccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCE
Q 011690 244 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 323 (479)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 323 (479)
.+ ..+ ++++++++ .||++.+++|++.+.++ +|++
T Consensus 193 --------------~l--~~~-vi~~~~~~--~k~~~~ll~A~~~l~~~---------------------------~p~~ 226 (374)
T 2xci_A 193 --------------KL--KGE-FIVAGSIH--TGEVEIILKAFKEIKKT---------------------------YSSL 226 (374)
T ss_dssp --------------CC--SSC-EEEEEEEC--GGGHHHHHHHHHHHHTT---------------------------CTTC
T ss_pred --------------hh--cCC-EEEEEeCC--CchHHHHHHHHHHHHhh---------------------------CCCc
Confidence 01 113 55666654 58999999999998764 8999
Q ss_pred EEEEEecCCCh-HHHHHHHHHcCCC---------cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhC
Q 011690 324 LFIITGKGPDK-ESYEEKIRRLRLK---------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC 393 (479)
Q Consensus 324 ~l~IvG~G~~~-~~l~~~~~~~~l~---------~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~ 393 (479)
+|+|+|+|+.+ +.+++.++++++. +|.|.|. .+|++.+|+.||++++|+ |..+.+|.+++|||||
T Consensus 227 ~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~---~~dl~~~y~~aDv~vl~s--s~~e~gg~~~lEAmA~ 301 (374)
T 2xci_A 227 KLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDR---FGILKELYPVGKIAIVGG--TFVNIGGHNLLEPTCW 301 (374)
T ss_dssp EEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCS---SSCHHHHGGGEEEEEECS--SSSSSCCCCCHHHHTT
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECC---HHHHHHHHHhCCEEEECC--cccCCCCcCHHHHHHh
Confidence 99999999987 5899999998874 5788886 789999999999999872 3335577899999999
Q ss_pred CCcEEEe-cCccchhccccC-ccEEE--eCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 394 GLPVCAV-SYSCIEELVKVD-KNGLL--FSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 394 G~PVIas-~~~~~~e~i~~~-~~G~l--~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
|+|||++ +.++.+|++++. .+|++ ++|+++|+++|.++++ | +.+++|++++++.
T Consensus 302 G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~----d-~~r~~mg~~ar~~ 359 (374)
T 2xci_A 302 GIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLS----V-KKEIKVEEKSREI 359 (374)
T ss_dssp TCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHH----S-CCCCCHHHHHHHH
T ss_pred CCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHh----H-HHHHHHHHHHHHH
Confidence 9999986 678888877542 34444 4789999999999999 6 6777888888873
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-23 Score=210.74 Aligned_cols=259 Identities=12% Similarity=0.049 Sum_probs=183.8
Q ss_pred hcCCCcEEEEeCCCCcchHHHHHHHHHh--cCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhcCCEE
Q 011690 98 KIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKMANGC 175 (479)
Q Consensus 98 ~~~~~DvI~~~~p~~~~~~~~~~~~~~~--~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~v 175 (479)
+..++|+|++++|+.....+.+.+++++ .++|+|+..|+.. ++.. . .+. ... ..|+.+++.||.+
T Consensus 71 ~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~-pl~~---~-~~~---~~~-----~~E~~~y~~aD~I 137 (339)
T 3rhz_A 71 GLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVV-PLMF---S-GNF---YLM-----DRTIAYYNKADVV 137 (339)
T ss_dssp TCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCH-HHHC---G-GGG---GGH-----HHHHHHHTTCSEE
T ss_pred cCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccH-HhhC---c-cch---hhH-----HHHHHHHHHCCEE
Confidence 4578999999998754443434444443 3899999999985 3211 1 111 111 2389999999999
Q ss_pred EEeCHHHHHHHHHhhCCe-EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 176 LCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 176 i~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
++.|+.+++.+.+. |++ ..+++.+..+...+.+.
T Consensus 138 i~~S~~~~~~l~~~-G~~~~ki~~~~~~~~~~~~~~-------------------------------------------- 172 (339)
T 3rhz_A 138 VAPSQKMIDKLRDF-GMNVSKTVVQGMWDHPTQAPM-------------------------------------------- 172 (339)
T ss_dssp EESCHHHHHHHHHT-TCCCSEEEECCSCCCCCCCCC--------------------------------------------
T ss_pred EECCHHHHHHHHHc-CCCcCceeecCCCCccCcccc--------------------------------------------
Confidence 99999999999876 766 33333321011001000
Q ss_pred cccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh
Q 011690 255 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 334 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~ 334 (479)
.. +.....++|+|++..... +.+ -.++++|+|+|+|+..
T Consensus 173 ---~~-~~~~~~i~yaG~l~k~~~----------L~~---------------------------l~~~~~f~ivG~G~~~ 211 (339)
T 3rhz_A 173 ---FP-AGLKREIHFPGNPERFSF----------VKE---------------------------WKYDIPLKVYTWQNVE 211 (339)
T ss_dssp ---CC-CEEEEEEEECSCTTTCGG----------GGG---------------------------CCCSSCEEEEESCCCC
T ss_pred ---cc-cCCCcEEEEeCCcchhhH----------HHh---------------------------CCCCCeEEEEeCCccc
Confidence 00 111248999999984211 110 0368999999999864
Q ss_pred HHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCC-----CCCCCcHHHHHHHhCCCcEEEecCccchhcc
Q 011690 335 ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-----SGLDLPMKVVDMFGCGLPVCAVSYSCIEELV 409 (479)
Q Consensus 335 ~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s-----~~e~~p~~llEama~G~PVIas~~~~~~e~i 409 (479)
.++||.|+|. +|.++++.+++++|+++++ .+. ....+|.|++||||||+|||+++.++..+++
T Consensus 212 ----------~l~nV~f~G~-~~~~el~~~l~~~~~~lv~-~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v 279 (339)
T 3rhz_A 212 ----------LPQNVHKINY-RPDEQLLMEMSQGGFGLVW-MDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELI 279 (339)
T ss_dssp ----------CCTTEEEEEC-CCHHHHHHHHHTEEEEECC-CCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHH
T ss_pred ----------CcCCEEEeCC-CCHHHHHHHHHhCCEEEEE-CCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHH
Confidence 2359999996 9999999999999999985 111 1135799999999999999999999999999
Q ss_pred ccCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHH
Q 011690 410 KVDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 473 (479)
Q Consensus 410 ~~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 473 (479)
+++.+|+++++.++++++|..+. ++.+++|++|+++.....+|..--++.+.+.+.++
T Consensus 280 ~~~~~G~~~~~~~e~~~~i~~l~------~~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 280 ENNGLGWIVKDVEEAIMKVKNVN------EDEYIELVKNVRSFNPILRKGFFTRRLLTESVFQA 337 (339)
T ss_dssp HHHTCEEEESSHHHHHHHHHHCC------HHHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHHHH
T ss_pred HhCCeEEEeCCHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 99999999999999999888652 56789999999997767777666666555555444
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-22 Score=216.54 Aligned_cols=159 Identities=8% Similarity=0.072 Sum_probs=126.1
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCC----CEEEEEEecC-----CC--
Q 011690 265 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP----RLLFIITGKG-----PD-- 333 (479)
Q Consensus 265 ~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~l~IvG~G-----~~-- 333 (479)
.+|+++||+.+.||++.+|+|+..+.++ +| +++|+++|.+ +.
T Consensus 256 ~vil~VgRl~~~Kgi~~ll~A~~~ll~~---------------------------~p~~~~~v~Lv~vG~p~~~~~~~~~ 308 (482)
T 1uqt_A 256 QNIFSVERLDYSKGLPERFLAYEALLEK---------------------------YPQHHGKIRYTQIAPTSRGDVQAYQ 308 (482)
T ss_dssp EEEEEECCBCGGGCHHHHHHHHHHHHHH---------------------------CGGGTTTEEEEEECCBCSTTSHHHH
T ss_pred EEEEEEeCCcccCCHHHHHHHHHHHHHh---------------------------CccccCcEEEEEEECCCccchHHHH
Confidence 4899999999999999999999998775 54 4889999953 32
Q ss_pred --hHHHHHHHHHcC-------CCcEEE-ecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCC-----cEE
Q 011690 334 --KESYEEKIRRLR-------LKRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-----PVC 398 (479)
Q Consensus 334 --~~~l~~~~~~~~-------l~~V~f-~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~-----PVI 398 (479)
++++++.+.+++ ...|.| .|. ++.+++..+|++||++|+| |..||||++++||||||+ |+|
T Consensus 309 ~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~-v~~~el~~ly~~ADv~v~p---S~~EGfgLv~lEAmA~g~~~~~gpvV 384 (482)
T 1uqt_A 309 DIRHQLENEAGRINGKYGQLGWTPLYYLNQH-FDRKLLMKIFRYSDVGLVT---PLRDGMNLVAKEYVAAQDPANPGVLV 384 (482)
T ss_dssp HHHHHHHHHHHHHHHHHCBTTBCSEEEECSC-CCHHHHHHHHHHCSEEEEC---CSSBSCCHHHHHHHHHSCTTSCCEEE
T ss_pred HHHHHHHHHHHHHhhhcccCCCceEEEeCCC-CCHHHHHHHHHHccEEEEC---CCcccCCchHHHHHHhCCCCCCCCEE
Confidence 233444444432 224776 465 9999999999999999999 778999999999999997 999
Q ss_pred EecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHH
Q 011690 399 AVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT 460 (479)
Q Consensus 399 as~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 460 (479)
+|+.+|..+.+. +|+++ .|++++|++|.+++++ ++++++.+.+++++....++|+.
T Consensus 385 ~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL~~---~~~~r~~~~~~~~~~v~~~s~~~ 442 (482)
T 1uqt_A 385 LSQFAGAANELT---SALIVNPYDRDEVAAALDRALTM---SLAERISRHAEMLDVIVKNDINH 442 (482)
T ss_dssp EETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHHHTCHHH
T ss_pred EECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhCCHHH
Confidence 999877777772 78999 4799999999999985 56778788777776554555543
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=192.22 Aligned_cols=154 Identities=21% Similarity=0.193 Sum_probs=136.2
Q ss_pred ccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHH
Q 011690 258 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 337 (479)
Q Consensus 258 ~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l 337 (479)
.++.+++ +++++|++.+.||++.+++|+..+ |+++|+|+|.|+..+.+
T Consensus 18 ~~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l-------------------------------~~~~l~i~G~~~~~~~l 65 (177)
T 2f9f_A 18 KFKCYGD-FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDHA 65 (177)
T ss_dssp CCCCCCS-CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTSTH
T ss_pred ccCCCCC-EEEEEeccccccCHHHHHHHHHhC-------------------------------CCcEEEEEecCccHHHH
Confidence 4556666 789999999999999999999864 56899999999998999
Q ss_pred HHHHH--HcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCcc
Q 011690 338 EEKIR--RLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 414 (479)
Q Consensus 338 ~~~~~--~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~ 414 (479)
++.++ ++++ ++|.|.|. ++.+++..+|++||++|+| +..+++|++++|||+||+|||+++.++..|+++++.+
T Consensus 66 ~~~~~~~~~~l~~~v~~~g~-~~~~e~~~~~~~adi~v~p---s~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~ 141 (177)
T 2f9f_A 66 ERYARKIMKIAPDNVKFLGS-VSEEELIDLYSRCKGLLCT---AKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKT 141 (177)
T ss_dssp HHHHHHHHHHSCTTEEEEES-CCHHHHHHHHHHCSEEEEC---CSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTT
T ss_pred HHHHHhhhcccCCcEEEeCC-CCHHHHHHHHHhCCEEEeC---CCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCc
Confidence 99999 7788 68999996 9999999999999999998 5678899999999999999999999999999999999
Q ss_pred EEEe-CCHHHHHHHHHHHHhcCCCCHHH-HHHHHHHHHH
Q 011690 415 GLLF-SSSSELADQLLMLFKGFPDDSDV-LKKLRNGTLE 451 (479)
Q Consensus 415 G~l~-~~~~~la~~l~~l~~~~~~~~~~-~~~~~~~~~~ 451 (479)
|+++ .|+++++++|.+++++ ++. ++++++++++
T Consensus 142 g~~~~~d~~~l~~~i~~l~~~----~~~~~~~~~~~a~~ 176 (177)
T 2f9f_A 142 GYLVNADVNEIIDAMKKVSKN----PDKFKKDCFRRAKE 176 (177)
T ss_dssp EEEECSCHHHHHHHHHHHHHC----TTTTHHHHHHHHHT
T ss_pred cEEeCCCHHHHHHHHHHHHhC----HHHHHHHHHHHHhc
Confidence 9998 7799999999999995 333 5666666654
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.4e-19 Score=186.69 Aligned_cols=274 Identities=10% Similarity=-0.014 Sum_probs=181.3
Q ss_pred CCcEEEEeCCCCcchHHHHHHHHHh-cCCcEEEEecCchhhhhhhhcCCCchhHHHHHH-HhHHHHHHHHhhcCCEEEEe
Q 011690 101 SPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRC-FSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 101 ~~DvI~~~~p~~~~~~~~~~~~~~~-~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~ad~vi~v 178 (479)
.-|+|.+|. +....+..+++.. .+.++.+-+|....+ ..+++..-+ + ...+-+.+ -.||.|.+.
T Consensus 149 ~~D~VwVhD---YhL~llp~~lR~~~~~~~igfFlHiPfPs---------~e~f~~Lp~~~-r~ell~gl-l~~DligF~ 214 (496)
T 3t5t_A 149 ADPVYLVHD---YQLVGVPALLREQRPDAPILLFVHIPWPS---------ADYWRILPKEI-RTGILHGM-LPATTIGFF 214 (496)
T ss_dssp SSCEEEEES---GGGTTHHHHHHHHCTTSCEEEECCSCCCC---------HHHHTTSCHHH-HHHHHHHH-TTSSEEEES
T ss_pred CCCEEEEeC---ccHhHHHHHHHhhCCCCeEEEEEcCCCCC---------HHHHhhCcHhH-HHHHHHHH-HhCCEEEEe
Confidence 468999999 5555555666554 467888888864211 111110000 0 00011122 469999999
Q ss_pred CHHHHHHHHHh----h-C--------------C--eEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccc
Q 011690 179 TQAMQHELAQN----W-G--------------I--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSN 236 (479)
Q Consensus 179 S~~~~~~l~~~----~-~--------------~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (479)
+......+.+. . | . ++.++|+| |++.|.+...+.+.++..+
T Consensus 215 t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~----------------- 277 (496)
T 3t5t_A 215 ADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEW----------------- 277 (496)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHH-----------------
T ss_pred cHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHH-----------------
Confidence 98777654431 2 2 1 26789999 8777866532111122222
Q ss_pred cccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCc
Q 011690 237 AGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 316 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (479)
++ ++ .+|+++||+.+.||++.+|+|+ .+.++
T Consensus 278 --------------------~~---~~-~lIl~VgRLd~~KGi~~lL~Af-~ll~~------------------------ 308 (496)
T 3t5t_A 278 --------------------AD---GH-RLVVHSGRTDPIKNAERAVRAF-VLAAR------------------------ 308 (496)
T ss_dssp --------------------HT---TS-EEEEEEEESSGGGCHHHHHHHH-HHHHH------------------------
T ss_pred --------------------hC---Cc-eEEEEcccCccccCHHHHHHHH-HHHHh------------------------
Confidence 11 33 4899999999999999999999 77665
Q ss_pred ccCCCC---EEEEEEe-----cCCChHHHHH----HHHHcCC----CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCC
Q 011690 317 QYLYPR---LLFIITG-----KGPDKESYEE----KIRRLRL----KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG 380 (479)
Q Consensus 317 ~~~~p~---~~l~IvG-----~G~~~~~l~~----~~~~~~l----~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~ 380 (479)
+|+ +.|+++| +|+..+.+++ .+.+++. ..|.|+|. ++.+++..+|+.||++|+| |..
T Consensus 309 ---~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~-v~~~el~aly~~ADv~vv~---Slr 381 (496)
T 3t5t_A 309 ---GGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDND-NDVNHTIACFRRADLLIFN---STV 381 (496)
T ss_dssp ---TSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEC-CCHHHHHHHHHHCSEEEEC---CSS
T ss_pred ---CcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCC-CCHHHHHHHHHhccEEEEC---ccc
Confidence 564 6788886 3333334444 4444332 26999998 9999999999999999998 777
Q ss_pred CCCcHHHHHHHhCC---CcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhh
Q 011690 381 LDLPMKVVDMFGCG---LPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLS 455 (479)
Q Consensus 381 e~~p~~llEama~G---~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
||||++++|||||| .|+|+|..+|..+.+ +.+|+++ .|++++|++|.++++. .+++++.+.+..++....
T Consensus 382 EGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l--~~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~V~~ 456 (496)
T 3t5t_A 382 DGQNLSTFEAPLVNERDADVILSETCGAAEVL--GEYCRSVNPFDLVEQAEAISAALAA---GPRQRAEAAARRRDAARP 456 (496)
T ss_dssp BSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH--GGGSEEECTTBHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHTT
T ss_pred ccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh--CCCEEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHH
Confidence 99999999999997 899999988887777 3479999 4699999999999996 456666665555554323
Q ss_pred ---hchHHHHHHHH
Q 011690 456 ---ARWATEWEEHA 466 (479)
Q Consensus 456 ---~~w~~~~~~~~ 466 (479)
..|.+..-+.+
T Consensus 457 ~d~~~W~~~fl~~L 470 (496)
T 3t5t_A 457 WTLEAWVQAQLDGL 470 (496)
T ss_dssp CBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 34554444333
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.9e-20 Score=189.61 Aligned_cols=255 Identities=15% Similarity=0.131 Sum_probs=171.9
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchh-HHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+|++++. ....+.+.++++..++|++...++.. + +....++ .... .+.+.+.+|.+++.
T Consensus 110 ~kPDvVi~~g~--~~~~~~~~~aa~~~~IPv~h~~ag~r-s-----~~~~~~~~~~~~--------r~~~~~~a~~~~~~ 173 (396)
T 3dzc_A 110 EQPDVVLVHGD--TATTFAASLAAYYQQIPVGHVEAGLR-T-----GNIYSPWPEEGN--------RKLTAALTQYHFAP 173 (396)
T ss_dssp HCCSEEEEETT--SHHHHHHHHHHHTTTCCEEEETCCCC-C-----SCTTSSTTHHHH--------HHHHHHTCSEEEES
T ss_pred cCCCEEEEECC--chhHHHHHHHHHHhCCCEEEEECCcc-c-----cccccCCcHHHH--------HHHHHHhcCEEECC
Confidence 79999999983 23334445677788999764322221 0 0001111 1111 22345789999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCCCCCCCCCCChH--H----HHHHHHhhhhcccCCCCccccccccccCCcccccchh
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLE--E----KHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIF 249 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (479)
|+..++.+.+. |++ +.++.|...+.+...... . +.++
T Consensus 174 se~~~~~l~~~-G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~--------------------------------- 219 (396)
T 3dzc_A 174 TDTSRANLLQE-NYNAENIFVTGNTVIDALLAVREKIHTDMDLQATL--------------------------------- 219 (396)
T ss_dssp SHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHH---------------------------------
T ss_pred CHHHHHHHHHc-CCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHH---------------------------------
Confidence 99999988775 775 778887511111100000 0 1111
Q ss_pred ccccccccc-cCCCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEE
Q 011690 250 TSLAGIDVF-LKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII 327 (479)
Q Consensus 250 ~~~~~~~~~-~~~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~I 327 (479)
+..++ +.++++.++++.+|.. ..|+++.+++|+..+.++ +|++++++
T Consensus 220 ----r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~---------------------------~~~~~~v~ 268 (396)
T 3dzc_A 220 ----ESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQ---------------------------HPECQILY 268 (396)
T ss_dssp ----HHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHH---------------------------CTTEEEEE
T ss_pred ----HHHhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHh---------------------------CCCceEEE
Confidence 12234 3455666667776643 347899999999999876 88999988
Q ss_pred E-ecCCChHHHHHHHHH-cCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe-cCc
Q 011690 328 T-GKGPDKESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYS 403 (479)
Q Consensus 328 v-G~G~~~~~l~~~~~~-~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas-~~~ 403 (479)
. |.++ .+++.+++ ++. ++|.|.++ +...++..+|+.||++|.+ | | + ..+|||++|+|||++ +.+
T Consensus 269 ~~g~~~---~~~~~l~~~~~~~~~v~~~~~-lg~~~~~~l~~~ad~vv~~---S-G---g-~~~EA~a~G~PvV~~~~~~ 336 (396)
T 3dzc_A 269 PVHLNP---NVREPVNKLLKGVSNIVLIEP-QQYLPFVYLMDRAHIILTD---S-G---G-IQEEAPSLGKPVLVMRETT 336 (396)
T ss_dssp ECCBCH---HHHHHHHHHTTTCTTEEEECC-CCHHHHHHHHHHCSEEEES---C-S---G-GGTTGGGGTCCEEECCSSC
T ss_pred EeCCCh---HHHHHHHHHHcCCCCEEEeCC-CCHHHHHHHHHhcCEEEEC---C-c---c-HHHHHHHcCCCEEEccCCC
Confidence 5 6553 23444444 243 68999997 8888999999999999987 3 3 2 348999999999999 688
Q ss_pred cchhccccCccEEEeC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 404 CIEELVKVDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 404 ~~~e~i~~~~~G~l~~-~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
+.+|+++.| ++++++ ++++|++++.++++ +++.+++|++++..+
T Consensus 337 ~~~e~v~~G-~~~lv~~d~~~l~~ai~~ll~----d~~~~~~m~~~~~~~ 381 (396)
T 3dzc_A 337 ERPEAVAAG-TVKLVGTNQQQICDALSLLLT----DPQAYQAMSQAHNPY 381 (396)
T ss_dssp SCHHHHHHT-SEEECTTCHHHHHHHHHHHHH----CHHHHHHHHTSCCTT
T ss_pred cchHHHHcC-ceEEcCCCHHHHHHHHHHHHc----CHHHHHHHhhccCCC
Confidence 888998877 578884 69999999999999 588889998776553
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.83 E-value=4e-19 Score=184.87 Aligned_cols=251 Identities=17% Similarity=0.141 Sum_probs=169.8
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchh-HHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+|++++. ....+.+.++++..++|++....+.. .+....++ .... .+.+.+.+|.+++.
T Consensus 113 ~kPD~Vi~~gd--~~~~l~~~laA~~~~IPv~h~~aglr------s~~~~~~~p~~~~--------r~~~~~~a~~~~~~ 176 (403)
T 3ot5_A 113 ENPDIVLVHGD--TTTSFAAGLATFYQQKMLGHVEAGLR------TWNKYSPFPEEMN--------RQLTGVMADIHFSP 176 (403)
T ss_dssp HCCSEEEEETT--CHHHHHHHHHHHHTTCEEEEESCCCC------CSCTTSSTTHHHH--------HHHHHHHCSEEEES
T ss_pred cCCCEEEEECC--chhHHHHHHHHHHhCCCEEEEECCcc------ccccccCCcHHHH--------HHHHHHhcCEEECC
Confidence 79999999983 22334445677788999653222111 00001011 1111 23455679999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCC--CCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLA 253 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (479)
|+..++.+.+. |++ +.++.|. |...+.+... .+.+.+
T Consensus 177 se~~~~~l~~~-Gi~~~~i~vvGn~~~D~~~~~~~~~-~~~~~~------------------------------------ 218 (403)
T 3ot5_A 177 TKQAKENLLAE-GKDPATIFVTGNTAIDALKTTVQKD-YHHPIL------------------------------------ 218 (403)
T ss_dssp SHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHSCTT-CCCHHH------------------------------------
T ss_pred CHHHHHHHHHc-CCCcccEEEeCCchHHHHHhhhhhh-cchHHH------------------------------------
Confidence 99999988776 775 7777774 2111111100 000100
Q ss_pred ccccccCCCCCeEEEEEecCCC-CCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE-ecC
Q 011690 254 GIDVFLKPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKG 331 (479)
Q Consensus 254 ~~~~~~~~~~~~~i~~~g~~~~-~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv-G~G 331 (479)
.. + ++++.++++.+|... .|+++.+++|+..+.++ +|++++++. |.+
T Consensus 219 -~~--l-~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~---------------------------~~~~~~v~~~~~~ 267 (403)
T 3ot5_A 219 -EN--L-GDNRLILMTAHRRENLGEPMQGMFEAVREIVES---------------------------REDTELVYPMHLN 267 (403)
T ss_dssp -HS--C-TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCSC
T ss_pred -Hh--c-cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHh---------------------------CCCceEEEecCCC
Confidence 11 2 345666777777543 46789999999998876 899999887 444
Q ss_pred CChHHHHHHHHH-cCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe-cCccchhc
Q 011690 332 PDKESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEEL 408 (479)
Q Consensus 332 ~~~~~l~~~~~~-~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas-~~~~~~e~ 408 (479)
+ .+++.+++ ++. ++|.+.|. +...++..+|+.||++|.+ | |...+|||++|+|+|++ +.++.+|.
T Consensus 268 ~---~~~~~l~~~~~~~~~v~l~~~-l~~~~~~~l~~~ad~vv~~---S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~ 335 (403)
T 3ot5_A 268 P---AVREKAMAILGGHERIHLIEP-LDAIDFHNFLRKSYLVFTD---S-----GGVQEEAPGMGVPVLVLRDTTERPEG 335 (403)
T ss_dssp H---HHHHHHHHHHTTCTTEEEECC-CCHHHHHHHHHHEEEEEEC---C-----HHHHHHGGGTTCCEEECCSSCSCHHH
T ss_pred H---HHHHHHHHHhCCCCCEEEeCC-CCHHHHHHHHHhcCEEEEC---C-----ccHHHHHHHhCCCEEEecCCCcchhh
Confidence 3 23444444 344 68999997 8888999999999999875 3 22448999999999999 68888898
Q ss_pred cccCccEEEeC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 409 VKVDKNGLLFS-SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 409 i~~~~~G~l~~-~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
++.+ +|++++ |++++++++.++++ +++.+++|++++..+
T Consensus 336 v~~g-~~~lv~~d~~~l~~ai~~ll~----~~~~~~~m~~~~~~~ 375 (403)
T 3ot5_A 336 IEAG-TLKLIGTNKENLIKEALDLLD----NKESHDKMAQAANPY 375 (403)
T ss_dssp HHHT-SEEECCSCHHHHHHHHHHHHH----CHHHHHHHHHSCCTT
T ss_pred eeCC-cEEEcCCCHHHHHHHHHHHHc----CHHHHHHHHhhcCcc
Confidence 8666 899885 89999999999999 588889998766553
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-19 Score=181.99 Aligned_cols=339 Identities=12% Similarity=0.019 Sum_probs=197.8
Q ss_pred ceEEEEEecCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecC-------------C---CCC
Q 011690 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW-------------P---TIP 68 (479)
Q Consensus 5 ~~~~i~~~~~~g~~~r~~~~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~-------------~---~~~ 68 (479)
++++++..+..|...++...+..|.++ ||+|+|++..+ ........|++++.++.. . .+.
T Consensus 21 MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (412)
T 3otg_A 21 MRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEG---FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEG 96 (412)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGG---GHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTT
T ss_pred eEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHH---HHHHHHhcCCceeecCcccccchhhhhhhhhcccCCcc
Confidence 455555544333333455677888886 99999999653 123334568888888720 0 000
Q ss_pred CCCCc-hhHHHHHHHHH-HHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhc
Q 011690 69 RGLPK-VLKPVLLLLKP-LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSL 146 (479)
Q Consensus 69 ~~~~~-~~~~~~~l~~~-l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~ 146 (479)
..... .......+... ......-+..++. ..+||+|+++.. . +.+.++++..++|+|+..|+....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~pDvVv~~~~---~--~~~~~aa~~~giP~v~~~~~~~~~------ 164 (412)
T 3otg_A 97 LTPEQLSELPQIVFGRVIPQRVFDELQPVIE-RLRPDLVVQEIS---N--YGAGLAALKAGIPTICHGVGRDTP------ 164 (412)
T ss_dssp CCHHHHTTSHHHHHHTHHHHHHHHHHHHHHH-HHCCSEEEEETT---C--HHHHHHHHHHTCCEEEECCSCCCC------
T ss_pred CChhHhhHHHHHHHhccchHHHHHHHHHHHH-hcCCCEEEECch---h--hHHHHHHHHcCCCEEEecccccCc------
Confidence 00000 00000111111 0111111222222 269999988852 1 224566778899999988775410
Q ss_pred CCCchhHHHHHHHhHHHHHHHH--------hhcCCEEEEeCHHHHHHHHHhhCCe-EEEecCCCCCCCCCCChHHHHHHH
Q 011690 147 GRRSHFVSIYRCFSVLRIEKYY--------GKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELF 217 (479)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~e~~~--------~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~ 217 (479)
.....++.+++ ....+++. ...+|.+++.++...+...+.+... ..+.+.+.. ... ..
T Consensus 165 --~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~---- 231 (412)
T 3otg_A 165 --DDLTRSIEEEV-RGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFA----EQG--DL---- 231 (412)
T ss_dssp --SHHHHHHHHHH-HHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCCCCC----CCC--CC----
T ss_pred --hhhhHHHHHHH-HHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeeccCCC----CCC--CC----
Confidence 01111222222 00112211 1357788888877665554433222 111111100 000 00
Q ss_pred HhhhhcccCCCCccccccccccCCcccccchhcccccccc--ccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhh
Q 011690 218 CRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGIDV--FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 295 (479)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~ 295 (479)
..+ ...++++.++++.|++. .++.+.+.+++..+.+
T Consensus 232 -------------------------------------~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~---- 269 (412)
T 3otg_A 232 -------------------------------------PAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG---- 269 (412)
T ss_dssp -------------------------------------CGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT----
T ss_pred -------------------------------------CCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc----
Confidence 001 12356677889999996 6788888887777653
Q ss_pred hhccCCCchhhhhHhhhccCcccCCCCEEEEEEe-cCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEE
Q 011690 296 ILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVC 373 (479)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG-~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~ 373 (479)
. ++++++++ +++..+.++ ++ ++|.|.|. + ++.++|+.||++|+
T Consensus 270 ------------------------~-~~~~~~~~g~~~~~~~l~------~~~~~v~~~~~-~---~~~~~l~~ad~~v~ 314 (412)
T 3otg_A 270 ------------------------L-DADVLVASGPSLDVSGLG------EVPANVRLESW-V---PQAALLPHVDLVVH 314 (412)
T ss_dssp ------------------------S-SSEEEEECCSSCCCTTCC------CCCTTEEEESC-C---CHHHHGGGCSEEEE
T ss_pred ------------------------C-CCEEEEEECCCCChhhhc------cCCCcEEEeCC-C---CHHHHHhcCcEEEE
Confidence 2 45665555 444344333 23 68999996 5 59999999999997
Q ss_pred cccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHH
Q 011690 374 LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKL 445 (479)
Q Consensus 374 p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~ 445 (479)
+ + | +.+++|||++|+|+|++..++ ..+.+.+..+|+++. ++++|+++|.++++ |++.++.+
T Consensus 315 ~---~-g---~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~----~~~~~~~~ 383 (412)
T 3otg_A 315 H---G-G---SGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLA----EESYRAGA 383 (412)
T ss_dssp S---C-C---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHH----CHHHHHHH
T ss_pred C---C-c---hHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh----CHHHHHHH
Confidence 5 2 2 369999999999999976543 678888888999993 78999999999999 58999999
Q ss_pred HHHHHHhhhhhchHH
Q 011690 446 RNGTLEMGLSARWAT 460 (479)
Q Consensus 446 ~~~~~~~~~~~~w~~ 460 (479)
++++++......|+.
T Consensus 384 ~~~~~~~~~~~~~~~ 398 (412)
T 3otg_A 384 RAVAAEIAAMPGPDE 398 (412)
T ss_dssp HHHHHHHHHSCCHHH
T ss_pred HHHHHHHhcCCCHHH
Confidence 998888655555533
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.2e-18 Score=174.59 Aligned_cols=312 Identities=17% Similarity=0.148 Sum_probs=185.2
Q ss_pred CCChhHHH----HHHHHHhhCCCcEEEEecCCCCCcccccCCCCeEEEEeecCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011690 16 GRSPRMQY----QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (479)
Q Consensus 16 g~~~r~~~----~a~~La~~~G~eV~Vv~~~~~~~~~~~~~~~gi~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 91 (479)
|+++|-.+ .|..|.+ .||+|+.+|.... ...+.....|++++.++....+.+..... +..+.+.+..++..
T Consensus 10 GGTgGHi~palala~~L~~-~g~~V~~vg~~~g-~e~~~v~~~g~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 84 (365)
T 3s2u_A 10 GGTGGHVFPALACAREFQA-RGYAVHWLGTPRG-IENDLVPKAGLPLHLIQVSGLRGKGLKSL---VKAPLELLKSLFQA 84 (365)
T ss_dssp CSSHHHHHHHHHHHHHHHH-TTCEEEEEECSSS-THHHHTGGGTCCEEECC-----------------CHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHh-CCCEEEEEECCch-HhhchhhhcCCcEEEEECCCcCCCCHHHH---HHHHHHHHHHHHHH
Confidence 34555444 3455555 4999999985443 22233445678888887322111111111 11122222222211
Q ss_pred HHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhHHHHHHHhHHHHHHHHhhc
Q 011690 92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRCFSVLRIEKYYGKM 171 (479)
Q Consensus 92 ~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 171 (479)
+.++ +..+||+|+.+.. . ....+.++++..|+|+++.-.+.. ... . .+++.+.
T Consensus 85 -~~~l-~~~~PDvVi~~g~--~-~s~p~~laA~~~~iP~vihe~n~~----------~G~-------~-----nr~l~~~ 137 (365)
T 3s2u_A 85 -LRVI-RQLRPVCVLGLGG--Y-VTGPGGLAARLNGVPLVIHEQNAV----------AGT-------A-----NRSLAPI 137 (365)
T ss_dssp -HHHH-HHHCCSEEEECSS--S-THHHHHHHHHHTTCCEEEEECSSS----------CCH-------H-----HHHHGGG
T ss_pred -HHHH-HhcCCCEEEEcCC--c-chHHHHHHHHHcCCCEEEEecchh----------hhh-------H-----HHhhccc
Confidence 1222 2379999998873 2 233445677888999987433322 111 1 3445677
Q ss_pred CCEEEEeCHHHHHHHHHhhCCeEEEecCCC-CCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhc
Q 011690 172 ANGCLCVTQAMQHELAQNWGIKATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFT 250 (479)
Q Consensus 172 ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (479)
++.+.+..+... ....+..+..|.. .+.+...
T Consensus 138 a~~v~~~~~~~~-----~~~~k~~~~g~pvr~~~~~~~------------------------------------------ 170 (365)
T 3s2u_A 138 ARRVCEAFPDTF-----PASDKRLTTGNPVRGELFLDA------------------------------------------ 170 (365)
T ss_dssp CSEEEESSTTSS-----CC---CEECCCCCCGGGCCCT------------------------------------------
T ss_pred cceeeecccccc-----cCcCcEEEECCCCchhhccch------------------------------------------
Confidence 888776554321 0011244444442 1222111
Q ss_pred cccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE-EEEe
Q 011690 251 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITG 329 (479)
Q Consensus 251 ~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-~IvG 329 (479)
+....+.++++.++++.|+....+..+.+++|+..+.. ..++.+ .++|
T Consensus 171 ---~~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~----------------------------~~~~~vi~~~G 219 (365)
T 3s2u_A 171 ---HARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPL----------------------------EIRPAIRHQAG 219 (365)
T ss_dssp ---TSSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCT----------------------------TTCCEEEEECC
T ss_pred ---hhhcccCCCCcEEEEECCcCCccccchhhHHHHHhccc----------------------------ccceEEEEecC
Confidence 11223456677788888999887777788888876643 123444 4556
Q ss_pred cCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccc----
Q 011690 330 KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI---- 405 (479)
Q Consensus 330 ~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~---- 405 (479)
++ +.+...+..++.+ .++.+.++ .++++++|++||++|+- .| ++++.|+|++|+|+|..+.+..
T Consensus 220 ~~-~~~~~~~~~~~~~-~~~~v~~f---~~dm~~~l~~aDlvI~r----aG---~~Tv~E~~a~G~P~Ilip~p~~~~~~ 287 (365)
T 3s2u_A 220 RQ-HAEITAERYRTVA-VEADVAPF---ISDMAAAYAWADLVICR----AG---ALTVSELTAAGLPAFLVPLPHAIDDH 287 (365)
T ss_dssp TT-THHHHHHHHHHTT-CCCEEESC---CSCHHHHHHHCSEEEEC----CC---HHHHHHHHHHTCCEEECC-----CCH
T ss_pred cc-ccccccceecccc-cccccccc---hhhhhhhhccceEEEec----CC---cchHHHHHHhCCCeEEeccCCCCCcH
Confidence 55 3455666666655 35778898 68999999999999962 33 5699999999999998875432
Q ss_pred ----hhccccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 406 ----EELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 406 ----~e~i~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
.+.+.+...|.++. ++++|+++|.++++ |++.+++|++++++..
T Consensus 288 Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~----d~~~~~~m~~~a~~~~ 339 (365)
T 3s2u_A 288 QTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLM----HPETLRSMADQARSLA 339 (365)
T ss_dssp HHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHH----CTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHC----CHHHHHHHHHHHHhcC
Confidence 24566666788873 47899999999999 6899999999999864
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.2e-16 Score=163.54 Aligned_cols=143 Identities=18% Similarity=0.201 Sum_probs=103.8
Q ss_pred CCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE-EEEecCCChHHHHH
Q 011690 261 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEE 339 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-~IvG~G~~~~~l~~ 339 (479)
++++.++++.|+.. .++.+.+.+++..+.+ .+++++ +++|+|+..+.++
T Consensus 230 ~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~----------------------------~~~~~~~~~~G~~~~~~~l~- 279 (430)
T 2iyf_A 230 GAEKVVLVSLGSAF-TKQPAFYRECVRAFGN----------------------------LPGWHLVLQIGRKVTPAELG- 279 (430)
T ss_dssp TCSEEEEEECTTTC-C-CHHHHHHHHHHHTT----------------------------CTTEEEEEECC---CGGGGC-
T ss_pred CCCCeEEEEcCCCC-CCcHHHHHHHHHHHhc----------------------------CCCeEEEEEeCCCCChHHhc-
Confidence 34567889999998 5555555555444421 256887 5789887655442
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCcc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN 414 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~ 414 (479)
.+ ++|.|.|. ++.. ++|+.||++|+. .| +++++|||++|+|+|++..++ ..+.+.+...
T Consensus 280 -----~~~~~v~~~~~-~~~~---~~l~~ad~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~ 343 (430)
T 2iyf_A 280 -----ELPDNVEVHDW-VPQL---AILRQADLFVTH----AG---AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGV 343 (430)
T ss_dssp -----SCCTTEEEESS-CCHH---HHHTTCSEEEEC----CC---HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTS
T ss_pred -----cCCCCeEEEec-CCHH---HHhhccCEEEEC----CC---ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCC
Confidence 23 68999995 7654 789999999863 22 368999999999999998655 4566777788
Q ss_pred EEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 415 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 415 G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
|+++. ++++|+++|.++++ |++.++++++.+++..
T Consensus 344 g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~ 382 (430)
T 2iyf_A 344 ARKLATEEATADLLRETALALVD----DPEVARRLRRIQAEMA 382 (430)
T ss_dssp EEECCCC-CCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHH
Confidence 99984 78999999999999 5888888888877754
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=163.23 Aligned_cols=148 Identities=14% Similarity=0.113 Sum_probs=99.2
Q ss_pred CCCCeEEEEEecCCCCC----------CHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEec
Q 011690 261 PNRPALVVSSTSWTPDE----------DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 330 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K----------~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~ 330 (479)
++++.++++.|++...+ .+..+++++..+ +++++++|+
T Consensus 225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~~ 272 (398)
T 4fzr_A 225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL--------------------------------GFEVVVAVS 272 (398)
T ss_dssp CSSCEEECC----------------CCSHHHHHHHGGGG--------------------------------TCEEEECCC
T ss_pred CCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC--------------------------------CCEEEEEeC
Confidence 45677888899986544 455555555432 478888887
Q ss_pred CCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec----Cccch
Q 011690 331 GPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIE 406 (479)
Q Consensus 331 G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~----~~~~~ 406 (479)
|+..+.++ ++ .++|.+.|. ++ +.++++.||++|.. .| +.+++|||++|+|+|+.. ..+..
T Consensus 273 ~~~~~~l~----~~-~~~v~~~~~-~~---~~~ll~~ad~~v~~----gG---~~t~~Ea~~~G~P~v~~p~~~~q~~~a 336 (398)
T 4fzr_A 273 DKLAQTLQ----PL-PEGVLAAGQ-FP---LSAIMPACDVVVHH----GG---HGTTLTCLSEGVPQVSVPVIAEVWDSA 336 (398)
T ss_dssp C------------C-CTTEEEESC-CC---HHHHGGGCSEEEEC----CC---HHHHHHHHHTTCCEEECCCSGGGHHHH
T ss_pred Ccchhhhc----cC-CCcEEEeCc-CC---HHHHHhhCCEEEec----CC---HHHHHHHHHhCCCEEecCCchhHHHHH
Confidence 76544333 21 278999996 64 78899999999963 22 568999999999999954 44677
Q ss_pred hccccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHH
Q 011690 407 ELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT 460 (479)
Q Consensus 407 e~i~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 460 (479)
+.+.+...|+++. ++++|++++.++++ |++.++++++.++++.....|+.
T Consensus 337 ~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~~~~~~~~~ 390 (398)
T 4fzr_A 337 RLLHAAGAGVEVPWEQAGVESVLAACARIRD----DSSYVGNARRLAAEMATLPTPAD 390 (398)
T ss_dssp HHHHHTTSEEECC-------CHHHHHHHHHH----CTHHHHHHHHHHHHHTTSCCHHH
T ss_pred HHHHHcCCEEecCcccCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHcCCCHHH
Confidence 8888899999984 67899999999999 58889999988888655555543
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.8e-15 Score=152.78 Aligned_cols=145 Identities=19% Similarity=0.190 Sum_probs=102.7
Q ss_pred CCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE-EEEecCCChHHHHH
Q 011690 261 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEE 339 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-~IvG~G~~~~~l~~ 339 (479)
++++.++++.|+....+ .+.+.+++..+.+ .+ +++ +++|+|+..+.+++
T Consensus 229 ~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~~----------------------------~~-~~~~~~~g~~~~~~~~~~ 278 (402)
T 3ia7_A 229 PDAPVLLVSLGNQFNEH-PEFFRACAQAFAD----------------------------TP-WHVVMAIGGFLDPAVLGP 278 (402)
T ss_dssp TTCCEEEEECCSCSSCC-HHHHHHHHHHHTT----------------------------SS-CEEEEECCTTSCGGGGCS
T ss_pred CCCCEEEEECCCCCcch-HHHHHHHHHHHhc----------------------------CC-cEEEEEeCCcCChhhhCC
Confidence 45677889999887654 2233333333221 33 454 45777765544332
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC-----ccchhccccCc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-----SCIEELVKVDK 413 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~-----~~~~e~i~~~~ 413 (479)
+ ++|.+.|. ++.. ++++.||++|+. .| ..+++|||++|+|+|+... .+..+.+.+..
T Consensus 279 ------~~~~v~~~~~-~~~~---~ll~~ad~~v~~----~G---~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g 341 (402)
T 3ia7_A 279 ------LPPNVEAHQW-IPFH---SVLAHARACLTH----GT---TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELG 341 (402)
T ss_dssp ------CCTTEEEESC-CCHH---HHHTTEEEEEEC----CC---HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTT
T ss_pred ------CCCcEEEecC-CCHH---HHHhhCCEEEEC----CC---HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcC
Confidence 3 68999996 6554 899999999963 22 2488999999999996544 46778888888
Q ss_pred cEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhh
Q 011690 414 NGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSA 456 (479)
Q Consensus 414 ~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
.|..+. ++++|++++.++++ |++.++++++.+.+.....
T Consensus 342 ~g~~~~~~~~~~~~l~~~~~~ll~----~~~~~~~~~~~~~~~~~~~ 384 (402)
T 3ia7_A 342 LGSVLRPDQLEPASIREAVERLAA----DSAVRERVRRMQRDILSSG 384 (402)
T ss_dssp SEEECCGGGCSHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHTSC
T ss_pred CEEEccCCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHhhCC
Confidence 999883 78999999999999 5888888888777754333
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.6e-16 Score=159.66 Aligned_cols=149 Identities=10% Similarity=0.091 Sum_probs=112.9
Q ss_pred CCCCeEEEEEecCCCCCCH-HHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHH
Q 011690 261 PNRPALVVSSTSWTPDEDF-GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 339 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K~~-~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~ 339 (479)
++++.++++.|+....++. ..+++++... ++ .|+++++++|+|+..+.++
T Consensus 216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~---------------------------~p~~~~v~~~~~~~~~~l~- 266 (391)
T 3tsa_A 216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-TE---------------------------LPGVEAVIAVPPEHRALLT- 266 (391)
T ss_dssp CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HT---------------------------STTEEEEEECCGGGGGGCT-
T ss_pred CCCCEEEEEcCCCCCcccchHHHHHHHHHh-cc---------------------------CCCeEEEEEECCcchhhcc-
Confidence 4567788888998765444 6677777666 53 7889999999876544432
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec----CccchhccccCcc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIEELVKVDKN 414 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~----~~~~~e~i~~~~~ 414 (479)
++ ++|.+.|. ++..+ ++..||++|.. . -+.+++|||++|+|+|+.. ..+..+.+.+...
T Consensus 267 -----~~~~~v~~~~~-~~~~~---ll~~ad~~v~~----~---G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~ 330 (391)
T 3tsa_A 267 -----DLPDNARIAES-VPLNL---FLRTCELVICA----G---GSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGA 330 (391)
T ss_dssp -----TCCTTEEECCS-CCGGG---TGGGCSEEEEC----C---CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTS
T ss_pred -----cCCCCEEEecc-CCHHH---HHhhCCEEEeC----C---CHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCC
Confidence 23 68999995 77655 56999999963 2 2358999999999999954 3456677888889
Q ss_pred EEEeCC------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhch
Q 011690 415 GLLFSS------SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW 458 (479)
Q Consensus 415 G~l~~~------~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w 458 (479)
|.++.. +++|++++.++++ |++.++++++.+.++.....|
T Consensus 331 g~~~~~~~~~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~~~~~~~ 376 (391)
T 3tsa_A 331 GICLPDEQAQSDHEQFTDSIATVLG----DTGFAAAAIKLSDEITAMPHP 376 (391)
T ss_dssp EEECCSHHHHTCHHHHHHHHHHHHT----CTHHHHHHHHHHHHHHTSCCH
T ss_pred EEecCcccccCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHcCCCH
Confidence 999854 8899999999999 588888888888776544545
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.6e-15 Score=154.11 Aligned_cols=151 Identities=19% Similarity=0.093 Sum_probs=106.8
Q ss_pred CCCCCeEEEEEecCCCC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHH
Q 011690 260 KPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 338 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~-K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~ 338 (479)
.++++.++++.|++... ++.+.+.+++..+.+ . +++++++|+|+..+.++
T Consensus 229 ~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~----------------------------~-~~~~v~~~g~~~~~~l~ 279 (398)
T 3oti_A 229 VPARPEVAITMGTIELQAFGIGAVEPIIAAAGE----------------------------V-DADFVLALGDLDISPLG 279 (398)
T ss_dssp CCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT----------------------------S-SSEEEEECTTSCCGGGC
T ss_pred CCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc----------------------------C-CCEEEEEECCcChhhhc
Confidence 34567789999999654 355555555555542 2 58899998877544433
Q ss_pred HHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe----cCccch--hcccc
Q 011690 339 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV----SYSCIE--ELVKV 411 (479)
Q Consensus 339 ~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas----~~~~~~--e~i~~ 411 (479)
++ ++|.+.|. + ++.++++.||++|.. . -+.++.|||++|+|+|+. +..+.. +.+.+
T Consensus 280 ------~~~~~v~~~~~-~---~~~~ll~~ad~~v~~----~---G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~ 342 (398)
T 3oti_A 280 ------TLPRNVRAVGW-T---PLHTLLRTCTAVVHH----G---GGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR 342 (398)
T ss_dssp ------SCCTTEEEESS-C---CHHHHHTTCSEEEEC----C---CHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH
T ss_pred ------cCCCcEEEEcc-C---CHHHHHhhCCEEEEC----C---CHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH
Confidence 24 68999996 5 577789999999963 2 235899999999999994 556777 88888
Q ss_pred CccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHH
Q 011690 412 DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWAT 460 (479)
Q Consensus 412 ~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 460 (479)
...|+++...+.-++.+.++++ |++.++.+++.+.++.....|+.
T Consensus 343 ~g~g~~~~~~~~~~~~l~~ll~----~~~~~~~~~~~~~~~~~~~~~~~ 387 (398)
T 3oti_A 343 RGIGLVSTSDKVDADLLRRLIG----DESLRTAAREVREEMVALPTPAE 387 (398)
T ss_dssp HTSEEECCGGGCCHHHHHHHHH----CHHHHHHHHHHHHHHHTSCCHHH
T ss_pred CCCEEeeCCCCCCHHHHHHHHc----CHHHHHHHHHHHHHHHhCCCHHH
Confidence 8999998432222333337788 58999999888888655555533
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.6e-14 Score=145.17 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=83.9
Q ss_pred EEEEE-EecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe
Q 011690 323 LLFII-TGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 400 (479)
Q Consensus 323 ~~l~I-vG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas 400 (479)
+++++ +|+++..+.++ .+ ++|.+.|. ++.. ++++.||++|+. .| ..+++|||++|+|+|+.
T Consensus 277 ~~~v~~~g~~~~~~~l~------~~~~~v~~~~~-~~~~---~ll~~ad~~v~~----~G---~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 277 WHVVMTLGGQVDPAALG------DLPPNVEAHRW-VPHV---KVLEQATVCVTH----GG---MGTLMEALYWGRPLVVV 339 (415)
T ss_dssp CEEEEECTTTSCGGGGC------CCCTTEEEESC-CCHH---HHHHHEEEEEES----CC---HHHHHHHHHTTCCEEEC
T ss_pred cEEEEEeCCCCChHHhc------CCCCcEEEEec-CCHH---HHHhhCCEEEEC----Cc---HHHHHHHHHhCCCEEEe
Confidence 66665 77776554443 24 68999996 6654 789999999963 22 24889999999999995
Q ss_pred c----CccchhccccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 401 S----YSCIEELVKVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 401 ~----~~~~~e~i~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
. .....+.+.....|..+. ++++|++++.++++ +++.++++++.+.+..
T Consensus 340 p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~ 396 (415)
T 3rsc_A 340 PQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAA----DPALLARVEAMRGHVR 396 (415)
T ss_dssp CCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHT----CHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHH
Confidence 4 444667777888898883 68999999999999 5888888888777754
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.7e-13 Score=135.17 Aligned_cols=140 Identities=14% Similarity=0.149 Sum_probs=102.7
Q ss_pred CCCCeEEEEEecCCCC-------CCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC
Q 011690 261 PNRPALVVSSTSWTPD-------EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 333 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~-------K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~ 333 (479)
++++.++++.|++... +.+..+++|+..+ ++++++++.++.
T Consensus 208 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~~~~~g~~~ 255 (384)
T 2p6p_A 208 DTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW--------------------------------DVELIVAAPDTV 255 (384)
T ss_dssp CSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT--------------------------------TCEEEEECCHHH
T ss_pred CCCCEEEEECCCCCccccccccHHHHHHHHHHHhcC--------------------------------CcEEEEEeCCCC
Confidence 3456789999998865 5677777776532 477877664433
Q ss_pred hHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc
Q 011690 334 KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV 409 (479)
Q Consensus 334 ~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i 409 (479)
.+.++ .+ -++|.+ |. ++. .++|++||++|+. .| +.+++|||++|+|+|+....+ ..+.+
T Consensus 256 ~~~l~----~~-~~~v~~-~~-~~~---~~~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~ 318 (384)
T 2p6p_A 256 AEALR----AE-VPQARV-GW-TPL---DVVAPTCDLLVHH----AG---GVSTLTGLSAGVPQLLIPKGSVLEAPARRV 318 (384)
T ss_dssp HHHHH----HH-CTTSEE-EC-CCH---HHHGGGCSEEEEC----SC---TTHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred HHhhC----CC-CCceEE-cC-CCH---HHHHhhCCEEEeC----Cc---HHHHHHHHHhCCCEEEccCcccchHHHHHH
Confidence 22222 22 268999 84 764 5688999999974 22 248999999999999998644 66767
Q ss_pred ccCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 410 KVDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 410 ~~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
.+...|+.++ +++++++++.++++ +++.++++++.+.++.
T Consensus 319 ~~~g~g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 319 ADYGAAIALLPGEDSTEAIADSCQELQA----KDTYARRAQDLSREIS 362 (384)
T ss_dssp HHHTSEEECCTTCCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHH
T ss_pred HHCCCeEecCcCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHH
Confidence 7778899884 68999999999999 5888888888777754
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.4e-13 Score=142.30 Aligned_cols=235 Identities=15% Similarity=0.141 Sum_probs=152.5
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCCCchhH-HHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFV-SIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+|++++... ..+. .++++..++|++....+.. + . ...+- ... .+.+.+.+|.+++.
T Consensus 93 ~kPD~Vlv~gd~~--~~~a-alaA~~~~IPv~h~eaglr-s------~-~~~~pee~n--------R~~~~~~a~~~~~~ 153 (385)
T 4hwg_A 93 EKPDAVLFYGDTN--SCLS-AIAAKRRKIPIFHMEAGNR-C------F-DQRVPEEIN--------RKIIDHISDVNITL 153 (385)
T ss_dssp HCCSEEEEESCSG--GGGG-HHHHHHTTCCEEEESCCCC-C------S-CTTSTHHHH--------HHHHHHHCSEEEES
T ss_pred cCCcEEEEECCch--HHHH-HHHHHHhCCCEEEEeCCCc-c------c-cccCcHHHH--------HHHHHhhhceeecC
Confidence 7999999998432 2223 4566788999653322221 0 0 00110 111 22345679999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCCCCCCCCCC-ChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhccccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQPPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAG 254 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (479)
|+..++.+.+. |++ +.++.|...+.+... +...+.+ .+
T Consensus 154 te~~~~~l~~~-G~~~~~I~vtGnp~~D~~~~~~~~~~~~~-------------------------------------~~ 195 (385)
T 4hwg_A 154 TEHARRYLIAE-GLPAELTFKSGSHMPEVLDRFMPKILKSD-------------------------------------IL 195 (385)
T ss_dssp SHHHHHHHHHT-TCCGGGEEECCCSHHHHHHHHHHHHHHCC-------------------------------------HH
T ss_pred CHHHHHHHHHc-CCCcCcEEEECCchHHHHHHhhhhcchhH-------------------------------------HH
Confidence 99999988776 775 777776411111000 0001111 12
Q ss_pred cccccCCCCCeEEEEEecCC---CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC
Q 011690 255 IDVFLKPNRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 331 (479)
Q Consensus 255 ~~~~~~~~~~~~i~~~g~~~---~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G 331 (479)
..+++.+ ++.++++.+|.. ..++++.+++|+..+.++ + ++.+++...
T Consensus 196 ~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~---------------------------~-~~~vv~p~~- 245 (385)
T 4hwg_A 196 DKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKE---------------------------Y-NFLIIFSTH- 245 (385)
T ss_dssp HHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHH---------------------------H-CCEEEEEEC-
T ss_pred HHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhc---------------------------C-CeEEEEECC-
Confidence 2334544 456777777643 447789999999998764 4 577666542
Q ss_pred CChHHHHHHHHHc-C-C---CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc-cc
Q 011690 332 PDKESYEEKIRRL-R-L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CI 405 (479)
Q Consensus 332 ~~~~~l~~~~~~~-~-l---~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~-~~ 405 (479)
| .+++.+++. + + ++|.+.+. +...++..+++.||+++.. | | ....||+++|+|+|..... +.
T Consensus 246 p---~~~~~l~~~~~~~~~~~~v~l~~~-lg~~~~~~l~~~adlvvt~---S-G----gv~~EA~alG~Pvv~~~~~ter 313 (385)
T 4hwg_A 246 P---RTKKRLEDLEGFKELGDKIRFLPA-FSFTDYVKLQMNAFCILSD---S-G----TITEEASILNLPALNIREAHER 313 (385)
T ss_dssp H---HHHHHHHTSGGGGGTGGGEEECCC-CCHHHHHHHHHHCSEEEEC---C-T----THHHHHHHTTCCEEECSSSCSC
T ss_pred h---HHHHHHHHHHHHhcCCCCEEEEcC-CCHHHHHHHHHhCcEEEEC---C-c----cHHHHHHHcCCCEEEcCCCccc
Confidence 2 356666665 4 2 58999987 8888999999999999964 3 3 2579999999999998643 35
Q ss_pred hhccccCccEEEe-CCHHHHHHHHHHHHhc
Q 011690 406 EELVKVDKNGLLF-SSSSELADQLLMLFKG 434 (479)
Q Consensus 406 ~e~i~~~~~G~l~-~~~~~la~~l~~l~~~ 434 (479)
+|.++.| +++++ .+++++++++.+++++
T Consensus 314 ~e~v~~G-~~~lv~~d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 314 PEGMDAG-TLIMSGFKAERVLQAVKTITEE 342 (385)
T ss_dssp THHHHHT-CCEECCSSHHHHHHHHHHHHTT
T ss_pred hhhhhcC-ceEEcCCCHHHHHHHHHHHHhC
Confidence 7877666 67888 4899999999999984
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.9e-11 Score=124.99 Aligned_cols=141 Identities=16% Similarity=0.192 Sum_probs=99.3
Q ss_pred CCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEE-EEEecCCChHHHHH
Q 011690 261 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEE 339 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-~IvG~G~~~~~l~~ 339 (479)
++++.++++.|+.. .+..+.+.+++..+. .+++++ +++|.+...+.++
T Consensus 253 ~~~~~v~v~~Gs~~-~~~~~~~~~~~~al~-----------------------------~~~~~~~~~~g~~~~~~~~~- 301 (424)
T 2iya_A 253 DGRPVLLIALGSAF-TDHLDFYRTCLSAVD-----------------------------GLDWHVVLSVGRFVDPADLG- 301 (424)
T ss_dssp SSCCEEEEECCSSS-CCCHHHHHHHHHHHT-----------------------------TCSSEEEEECCTTSCGGGGC-
T ss_pred CCCCEEEEEcCCCC-cchHHHHHHHHHHHh-----------------------------cCCcEEEEEECCcCChHHhc-
Confidence 45677888999887 334344333333332 234666 5678876544332
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCcc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN 414 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~ 414 (479)
.+ ++|.+.+ |++.. ++|+.||++|.- .| ..+++|||++|+|+|+....+ ..+.+.+...
T Consensus 302 -----~~~~~v~~~~-~~~~~---~~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~ 365 (424)
T 2iya_A 302 -----EVPPNVEVHQ-WVPQL---DILTKASAFITH----AG---MGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGL 365 (424)
T ss_dssp -----SCCTTEEEES-SCCHH---HHHTTCSEEEEC----CC---HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTS
T ss_pred -----cCCCCeEEec-CCCHH---HHHhhCCEEEEC----Cc---hhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCC
Confidence 24 6899999 47754 689999998862 22 358999999999999997643 4566667778
Q ss_pred EEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 415 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 415 G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
|+.+. ++++++++|.++++ +++.++++++.+.+.
T Consensus 366 g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~ 403 (424)
T 2iya_A 366 GRHIPRDQVTAEKLREAVLAVAS----DPGVAERLAAVRQEI 403 (424)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHH
T ss_pred EEEcCcCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHH
Confidence 98884 78999999999999 577777777766654
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.41 E-value=6.9e-11 Score=127.89 Aligned_cols=180 Identities=14% Similarity=0.122 Sum_probs=132.5
Q ss_pred cccCCC-CCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEE--EEec--C
Q 011690 257 VFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI--ITGK--G 331 (479)
Q Consensus 257 ~~~~~~-~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~--IvG~--G 331 (479)
++++.+ +.+++++..+. .|..+.+++++..+.++ .|+..+. ++|+ |
T Consensus 433 ~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~---------------------------vP~s~L~l~~~g~~~g 483 (631)
T 3q3e_A 433 YLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDR---------------------------AKVKVHFHFALGQSNG 483 (631)
T ss_dssp CCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHH---------------------------CSSEEEEEEEESSCCG
T ss_pred ccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHh---------------------------CCCcEEEEEecCCCch
Confidence 344442 34456666664 68999999999998876 7876653 4674 3
Q ss_pred CChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccc
Q 011690 332 PDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK 410 (479)
Q Consensus 332 ~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~ 410 (479)
... .+.+.+.+.|+ ++|.|.|. ++.++....|+.+|+++-|+. .+-+++.+|||+||+|||+........-+.
T Consensus 484 ~~~-~~~~~~~~~GI~~Rv~F~g~-~p~~e~la~y~~aDIfLDpfp----y~GgtTtlEALwmGVPVVTl~G~~~asRvg 557 (631)
T 3q3e_A 484 ITH-PYVERFIKSYLGDSATAHPH-SPYHQYLRILHNCDMMVNPFP----FGNTNGIIDMVTLGLVGVCKTGAEVHEHID 557 (631)
T ss_dssp GGH-HHHHHHHHHHHGGGEEEECC-CCHHHHHHHHHTCSEEECCSS----SCCSHHHHHHHHTTCCEEEECCSSHHHHHH
T ss_pred hhH-HHHHHHHHcCCCccEEEcCC-CCHHHHHHHHhcCcEEEeCCc----ccCChHHHHHHHcCCCEEeccCCcHHHHhH
Confidence 333 34445567788 79999998 999999999999999998732 234789999999999999987665544332
Q ss_pred ------cCccEE-EeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh-hhh---chHHHHHHHHHHHHHHHHh
Q 011690 411 ------VDKNGL-LFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG-LSA---RWATEWEEHAKPLITEVIS 475 (479)
Q Consensus 411 ------~~~~G~-l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~---~w~~~~~~~~~~~~~~~~~ 475 (479)
-|-.++ +..+.+++.+...+|.+ |++.+.++|+.+++.. .+. .|...+++.++.++++..+
T Consensus 558 aSlL~~~GLpE~LIA~d~eeYv~~Av~La~----D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~w~~ 629 (631)
T 3q3e_A 558 EGLFKRLGLPEWLIANTVDEYVERAVRLAE----NHQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNAFLK 629 (631)
T ss_dssp HHHHHHTTCCGGGEESSHHHHHHHHHHHHH----CHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCcceecCCHHHHHHHHHHHhC----CHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHHHHh
Confidence 344553 67899999999999999 6999999999988753 122 3556777777777766544
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.4e-11 Score=128.45 Aligned_cols=140 Identities=14% Similarity=0.079 Sum_probs=102.6
Q ss_pred CCCCeEEEEEecCCC-----CCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChH
Q 011690 261 PNRPALVVSSTSWTP-----DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 335 (479)
Q Consensus 261 ~~~~~~i~~~g~~~~-----~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~ 335 (479)
++++.++++.|+... .+.+..+++|+..+ ++++++++.++..+
T Consensus 265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~ 312 (441)
T 2yjn_A 265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV--------------------------------DAEIIATFDAQQLE 312 (441)
T ss_dssp CSSCEEEEEC----------CCSTTTTHHHHHTS--------------------------------SSEEEECCCTTTTS
T ss_pred CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC--------------------------------CCEEEEEECCcchh
Confidence 456778899998875 47888888887532 46787777665433
Q ss_pred HHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccc
Q 011690 336 SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVK 410 (479)
Q Consensus 336 ~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~ 410 (479)
.++ ++ ++|.+.|. ++. .++|.+||++|+. .| +.++.|||++|+|+|+....+ ..+.+.
T Consensus 313 ~l~------~~~~~v~~~~~-~~~---~~ll~~ad~~V~~----~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 375 (441)
T 2yjn_A 313 GVA------NIPDNVRTVGF-VPM---HALLPTCAATVHH----GG---PGSWHTAAIHGVPQVILPDGWDTGVRAQRTQ 375 (441)
T ss_dssp SCS------SCCSSEEECCS-CCH---HHHGGGCSEEEEC----CC---HHHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred hhc------cCCCCEEEecC-CCH---HHHHhhCCEEEEC----CC---HHHHHHHHHhCCCEEEeCCcccHHHHHHHHH
Confidence 221 24 68999995 775 4578999999962 22 468999999999999998743 566777
Q ss_pred cCccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 411 VDKNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 411 ~~~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+...|+.+. ++++|+++|.++++ +++.++.+++.+.+..
T Consensus 376 ~~g~g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~ 418 (441)
T 2yjn_A 376 EFGAGIALPVPELTPDQLRESVKRVLD----DPAHRAGAARMRDDML 418 (441)
T ss_dssp HHTSEEECCTTTCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHH
T ss_pred HcCCEEEcccccCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHH
Confidence 778899884 68999999999999 5888888888777654
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.29 E-value=1e-09 Score=113.36 Aligned_cols=135 Identities=11% Similarity=0.024 Sum_probs=96.5
Q ss_pred CCCeEEEEEecC-CCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE-ecCCChHHHHH
Q 011690 262 NRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYEE 339 (479)
Q Consensus 262 ~~~~~i~~~g~~-~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv-G~G~~~~~l~~ 339 (479)
+++.++++.|+. .+.+..+.+++|+..+ + .+++++ |.+....
T Consensus 237 ~~~~v~v~~Gs~~~~~~~~~~~~~al~~~-------------------------------~-~~~v~~~g~~~~~~---- 280 (415)
T 1iir_A 237 GPPPVYLGFGSLGAPADAVRVAIDAIRAH-------------------------------G-RRVILSRGWADLVL---- 280 (415)
T ss_dssp SSCCEEEECC---CCHHHHHHHHHHHHHT-------------------------------T-CCEEECTTCTTCCC----
T ss_pred CCCeEEEeCCCCCCcHHHHHHHHHHHHHC-------------------------------C-CeEEEEeCCCcccc----
Confidence 345688999998 4777777777777643 1 345444 7664320
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCcc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN 414 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~ 414 (479)
..+ ++|.+.+ |++..+ ++.+||++|+. .| ..++.|||++|+|+|+....+ ..+.+++...
T Consensus 281 ----~~~~~~v~~~~-~~~~~~---~l~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~ 345 (415)
T 1iir_A 281 ----PDDGADCFAIG-EVNHQV---LFGRVAAVIHH----GG---AGTTHVAARAGAPQILLPQMADQPYYAGRVAELGV 345 (415)
T ss_dssp ----SSCGGGEEECS-SCCHHH---HGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTS
T ss_pred ----cCCCCCEEEeC-cCChHH---HHhhCCEEEeC----CC---hhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCC
Confidence 234 6899999 588654 57999999963 22 259999999999999997644 5566777778
Q ss_pred EEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 415 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 415 G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
|+.+. ++++++++|.++ + +++.++++++.+.+.
T Consensus 346 g~~~~~~~~~~~~l~~~i~~l-~----~~~~~~~~~~~~~~~ 382 (415)
T 1iir_A 346 GVAHDGPIPTFDSLSAALATA-L----TPETHARATAVAGTI 382 (415)
T ss_dssp EEECSSSSCCHHHHHHHHHHH-T----SHHHHHHHHHHHHHS
T ss_pred cccCCcCCCCHHHHHHHHHHH-c----CHHHHHHHHHHHHHH
Confidence 99884 688999999999 7 578777777777664
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-09 Score=112.16 Aligned_cols=138 Identities=13% Similarity=0.095 Sum_probs=96.8
Q ss_pred CCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHH
Q 011690 261 PNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 339 (479)
Q Consensus 261 ~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~ 339 (479)
++++.++++.|+.. +.+.+..+++++..+ ++++++++.++..+.
T Consensus 219 ~~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~--------------------------------~~~vv~~~g~~~~~~--- 263 (404)
T 3h4t_A 219 AGSPPVYVGFGSGPAPAEAARVAIEAVRAQ--------------------------------GRRVVLSSGWAGLGR--- 263 (404)
T ss_dssp TSSCCEEECCTTSCCCTTHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCCC---
T ss_pred cCCCeEEEECCCCCCcHHHHHHHHHHHHhC--------------------------------CCEEEEEeCCccccc---
Confidence 45567888889887 666677777776643 355666543332211
Q ss_pred HHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCcc
Q 011690 340 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKN 414 (479)
Q Consensus 340 ~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~ 414 (479)
.+. +||.+.+. ++. .+++..||++|.- .| ..++.||+++|+|+|+....+ ..+.+.....
T Consensus 264 ----~~~~~~v~~~~~-~~~---~~ll~~~d~~v~~----gG---~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~ 328 (404)
T 3h4t_A 264 ----IDEGDDCLVVGE-VNH---QVLFGRVAAVVHH----GG---AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGV 328 (404)
T ss_dssp ----SSCCTTEEEESS-CCH---HHHGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTS
T ss_pred ----ccCCCCEEEecC-CCH---HHHHhhCcEEEEC----Cc---HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCC
Confidence 223 78999995 765 5578999999963 22 148999999999999987554 3345666678
Q ss_pred EEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 415 GLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 415 G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
|..+. ++++|++++.++++ ++.++++++.+.++.
T Consensus 329 g~~l~~~~~~~~~l~~ai~~ll~-----~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 329 GVAHDGPTPTVESLSAALATALT-----PGIRARAAAVAGTIR 366 (404)
T ss_dssp EEECSSSSCCHHHHHHHHHHHTS-----HHHHHHHHHHHTTCC
T ss_pred EeccCcCCCCHHHHHHHHHHHhC-----HHHHHHHHHHHHHHh
Confidence 88873 68899999999986 466777777766643
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-10 Score=117.47 Aligned_cols=143 Identities=18% Similarity=0.173 Sum_probs=93.3
Q ss_pred CCCCCeEEEEEecCCCCCC-HHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHH
Q 011690 260 KPNRPALVVSSTSWTPDED-FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 338 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~K~-~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~ 338 (479)
.++++.++++.|+....++ .+.+.+++..+.+ .+..+++.+.+...+..
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~-----------------------------~~~~~v~~~~~~~~~~~- 283 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD-----------------------------VDAEFVLTLGGGDLALL- 283 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG-----------------------------SSSEEEEECCTTCCCCC-
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc-----------------------------cCceEEEEecCcccccc-
Confidence 4566778888888765443 3344444444432 24566665544322211
Q ss_pred HHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCc
Q 011690 339 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDK 413 (479)
Q Consensus 339 ~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~ 413 (479)
..+ ++|.+.+ |+|. .++|..+|++|.- .| .+++.|||++|+|+|+....+ +.+.+....
T Consensus 284 -----~~~~~~v~~~~-~~p~---~~lL~~~~~~v~h----~G---~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G 347 (400)
T 4amg_A 284 -----GELPANVRVVE-WIPL---GALLETCDAIIHH----GG---SGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLG 347 (400)
T ss_dssp -----CCCCTTEEEEC-CCCH---HHHHTTCSEEEEC----CC---HHHHHHHHHHTCCEEECCC---CHHHHHHHHHHT
T ss_pred -----ccCCCCEEEEe-ecCH---HHHhhhhhheecc----CC---ccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCC
Confidence 134 6899988 5875 4578999998852 22 348999999999999975443 556666777
Q ss_pred cEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 414 NGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 414 ~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
.|+.+++.+..+++|.++++ |++.+++.++-+.++
T Consensus 348 ~g~~l~~~~~~~~al~~lL~----d~~~r~~a~~l~~~~ 382 (400)
T 4amg_A 348 IGFDAEAGSLGAEQCRRLLD----DAGLREAALRVRQEM 382 (400)
T ss_dssp SEEECCTTTCSHHHHHHHHH----CHHHHHHHHHHHHHH
T ss_pred CEEEcCCCCchHHHHHHHHc----CHHHHHHHHHHHHHH
Confidence 89888777778899999999 577666666555553
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.9e-08 Score=103.73 Aligned_cols=134 Identities=10% Similarity=-0.013 Sum_probs=94.0
Q ss_pred CCeEEEEEecCC---CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE-ecCCChHHHH
Q 011690 263 RPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYE 338 (479)
Q Consensus 263 ~~~~i~~~g~~~---~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv-G~G~~~~~l~ 338 (479)
++.++++.|+.. +.+.+..+++|+..+ +.+++++ |.+... .
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~--~- 281 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ--------------------------------GRRVILSRGWTELV--L- 281 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCC--C-
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC--------------------------------CCeEEEEeCCcccc--c-
Confidence 456888888875 345555566665532 2455554 766431 1
Q ss_pred HHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCc
Q 011690 339 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDK 413 (479)
Q Consensus 339 ~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~ 413 (479)
..+ ++|.+.+. ++. .++|.+||++|+- .| ..++.||+++|+|+|+....+ ..+.+++..
T Consensus 282 -----~~~~~~v~~~~~-~~~---~~ll~~~d~~v~~----~G---~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g 345 (416)
T 1rrv_A 282 -----PDDRDDCFAIDE-VNF---QALFRRVAAVIHH----GS---AGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALG 345 (416)
T ss_dssp -----SCCCTTEEEESS-CCH---HHHGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHT
T ss_pred -----cCCCCCEEEecc-CCh---HHHhccCCEEEec----CC---hhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCC
Confidence 234 68999994 874 5578999999962 22 359999999999999987543 445666777
Q ss_pred cEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 414 NGLLFS----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 414 ~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
.|+.+. +++++++++.++ . |++.++++++.+.+.
T Consensus 346 ~g~~~~~~~~~~~~l~~~i~~l-~----~~~~~~~~~~~~~~~ 383 (416)
T 1rrv_A 346 IGVAHDGPTPTFESLSAALTTV-L----APETRARAEAVAGMV 383 (416)
T ss_dssp SEEECSSSCCCHHHHHHHHHHH-T----SHHHHHHHHHHTTTC
T ss_pred CccCCCCCCCCHHHHHHHHHHh-h----CHHHHHHHHHHHHHH
Confidence 888873 588999999999 7 577777777766654
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=5.3e-10 Score=101.04 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=95.3
Q ss_pred CCCCeEEEEEecCC---CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHH
Q 011690 261 PNRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 337 (479)
Q Consensus 261 ~~~~~~i~~~g~~~---~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l 337 (479)
++++.++++.|+.. +.|.+..+++|+.. . +.++++++.|+..+
T Consensus 19 ~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~-------------------------------~-~~~~~~~~g~~~~~-- 64 (170)
T 2o6l_A 19 GENGVVVFSLGSMVSNMTEERANVIASALAQ-------------------------------I-PQKVLWRFDGNKPD-- 64 (170)
T ss_dssp TTTCEEEEECCSCCTTCCHHHHHHHHHHHTT-------------------------------S-SSEEEEECCSSCCT--
T ss_pred CCCCEEEEECCCCcccCCHHHHHHHHHHHHh-------------------------------C-CCeEEEEECCcCcc--
Confidence 34567899999985 55666777776643 2 25777777665322
Q ss_pred HHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc----cchhccccC
Q 011690 338 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVD 412 (479)
Q Consensus 338 ~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~----~~~e~i~~~ 412 (479)
++ ++|.+.|. ++.+++..+ .+||++|+. . -+.++.|||++|+|+|+.... ...+.+.+.
T Consensus 65 -------~~~~~v~~~~~-~~~~~~l~~-~~ad~~I~~----~---G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~ 128 (170)
T 2o6l_A 65 -------TLGLNTRLYKW-IPQNDLLGH-PKTRAFITH----G---GANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR 128 (170)
T ss_dssp -------TCCTTEEEESS-CCHHHHHTS-TTEEEEEEC----C---CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT
T ss_pred -------cCCCcEEEecC-CCHHHHhcC-CCcCEEEEc----C---CccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc
Confidence 24 68999995 887554332 999999963 2 246999999999999999864 346778888
Q ss_pred ccEEEeC----CHHHHHHHHHHHHhcCCCCHHHHHHH
Q 011690 413 KNGLLFS----SSSELADQLLMLFKGFPDDSDVLKKL 445 (479)
Q Consensus 413 ~~G~l~~----~~~~la~~l~~l~~~~~~~~~~~~~~ 445 (479)
..|+.++ ++++|+++|.++++ +++.++++
T Consensus 129 g~g~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~a 161 (170)
T 2o6l_A 129 GAAVRVDFNTMSSTDLLNALKRVIN----DPSYKENV 161 (170)
T ss_dssp TSEEECCTTTCCHHHHHHHHHHHHH----CHHHHHHH
T ss_pred CCeEEeccccCCHHHHHHHHHHHHc----CHHHHHHH
Confidence 8999984 78999999999998 46543333
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=0.0001 Score=77.32 Aligned_cols=112 Identities=16% Similarity=0.136 Sum_probs=75.9
Q ss_pred CcEEEecCCCCcchHHHHHH--cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccC-ccEEEeC
Q 011690 347 KRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~-~~G~l~~ 419 (479)
+++.+.+ |+|+. ++|+ ++|++|. ..| ..++.||+++|+|+|+....+ ....+.+. +.|..+.
T Consensus 325 ~~~~v~~-w~pq~---~vL~h~~~~~fvt----h~G---~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~ 393 (456)
T 2c1x_A 325 GYGMVVP-WAPQA---EVLAHEAVGAFVT----HCG---WNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 393 (456)
T ss_dssp TTEEEES-CCCHH---HHHTSTTEEEEEE----CCC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred CceEEec-CCCHH---HHhcCCcCCEEEe----cCC---cchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec
Confidence 5788888 78874 5788 6677774 122 248999999999999997543 34556666 7888873
Q ss_pred ----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhch-----HHHHHHHHHHHHHHHHh
Q 011690 420 ----SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW-----ATEWEEHAKPLITEVIS 475 (479)
Q Consensus 420 ----~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w-----~~~~~~~~~~~~~~~~~ 475 (479)
+.+++++++.+++.+ ++ .+.+++++.+.....+- ..++ +.+..+++++.+
T Consensus 394 ~~~~~~~~l~~~i~~ll~~----~~-~~~~r~~a~~l~~~~~~a~~~gGsS~-~~l~~~v~~~~~ 452 (456)
T 2c1x_A 394 GGVFTKSGLMSCFDQILSQ----EK-GKKLRENLRALRETADRAVGPKGSST-ENFITLVDLVSK 452 (456)
T ss_dssp GGSCCHHHHHHHHHHHHHS----HH-HHHHHHHHHHHHHHHHHHTSTTCHHH-HHHHHHHHHHTS
T ss_pred CCCcCHHHHHHHHHHHHCC----Cc-HHHHHHHHHHHHHHHHHhhhcCCcHH-HHHHHHHHHHHh
Confidence 578999999999984 54 66777777775422211 1122 345666666543
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=7.8e-05 Score=78.40 Aligned_cols=93 Identities=13% Similarity=0.217 Sum_probs=66.9
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccC-ccEEEeC--
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS-- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~-~~G~l~~-- 419 (479)
+|+.+.+ |+|+. .+|+.+++.++. +.+ |. .+++|++++|+|+|+....+ ....+.+. +.|..+.
T Consensus 327 ~~~~vv~-w~Pq~---~vL~h~~v~~fv---tH~-G~-~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~ 397 (454)
T 3hbf_A 327 TKGKIVA-WAPQV---EILKHSSVGVFL---THS-GW-NSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNG 397 (454)
T ss_dssp TTEEEES-SCCHH---HHHHSTTEEEEE---ECC-CH-HHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGG
T ss_pred CceEEEe-eCCHH---HHHhhcCcCeEE---ecC-Cc-chHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCC
Confidence 5788887 78874 688999965443 222 22 48999999999999987533 34556554 7888873
Q ss_pred --CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 420 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 420 --~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+.+++++++.+++.+ +..+.+|+++.+++
T Consensus 398 ~~~~~~l~~av~~ll~~-----~~~~~~r~~a~~l~ 428 (454)
T 3hbf_A 398 VLTKESIKKALELTMSS-----EKGGIMRQKIVKLK 428 (454)
T ss_dssp SCCHHHHHHHHHHHHSS-----HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCC-----ChHHHHHHHHHHHH
Confidence 478999999999983 44566777777654
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=2.3e-06 Score=94.59 Aligned_cols=184 Identities=13% Similarity=0.088 Sum_probs=120.4
Q ss_pred CCCCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC-ChHHH
Q 011690 260 KPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKESY 337 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~-~~~~l 337 (479)
.++.+ +++.+.|++.+|+.+. ++..+..+.+- .+........+.|++.|+|. .-+.-
T Consensus 523 dpd~l-~~~~vkRl~eYKRq~Lnil~ii~~~~~i--------------------~~~~~~~~~p~q~If~GKA~P~y~~a 581 (796)
T 1l5w_A 523 NPQAI-FDIQIKRLHEYKRQHLNLLHILALYKEI--------------------RENPQADRVPRVFLFGAKAAPGYYLA 581 (796)
T ss_dssp CTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHHH--------------------HTCTTCCCCCEEEEEECCCCTTCHHH
T ss_pred CCCcc-eEeeeecchhhcccCEeHHHHHHHHHHH--------------------hcCCCCCCCCeEEEEEecCChhHHHH
Confidence 44554 8999999999999999 88888777541 11111112459999999984 32222
Q ss_pred HHH---HHHc--------CC-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc
Q 011690 338 EEK---IRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 403 (479)
Q Consensus 338 ~~~---~~~~--------~l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~ 403 (479)
++. +.+. .. + +|.|+-. .+.+-...++++||+.+.|++. ..|..|+.=+=+|..|.+-|++--|
T Consensus 582 K~iIk~i~~va~~in~Dp~~~~~lKVvfl~n-Y~vslA~~I~~gaDv~l~~S~a-~~EAsGTs~MKam~NGaL~iGtLDG 659 (796)
T 1l5w_A 582 KNIIFAINKVADVINNDPLVGDKLKVVFLPD-YCVSAAEKLIPAADISEQISTA-GKEASGTGNMKLALNGALTVGTLDG 659 (796)
T ss_dssp HHHHHHHHHHHHHHHTCTTTGGGEEEEECSS-CCHHHHHHHGGGCSEEEECCCT-TTCCCCSHHHHHHHTTCEEEECSCT
T ss_pred HHHHHHHHHHHHHhccccccCCceEEEEECC-CCHHHHHHHhhhcceeecCCCC-CCCCCchHHHHHHHcCCeeecCcCC
Confidence 222 2222 23 4 6888876 6778888999999999999543 2466677888899999999999888
Q ss_pred cchhcccc--CccEEEe-CCHHHHHHHHH------HHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHH
Q 011690 404 CIEELVKV--DKNGLLF-SSSSELADQLL------MLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVI 474 (479)
Q Consensus 404 ~~~e~i~~--~~~G~l~-~~~~~la~~l~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 474 (479)
...|+.+. .+|||+| .+++++.+.-. ..... ++ .++++-+++.. ..++|++. ....+|++.++
T Consensus 660 anvEi~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~---~~-~~~~vvd~~~~--g~fs~~~~--~~y~~Ly~~L~ 731 (796)
T 1l5w_A 660 ANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKK---DK-VLDAVLKELES--GKYSDGDK--HAFDQMLHSIG 731 (796)
T ss_dssp THHHHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHH---CH-HHHHHHHHHHH--TTTTTTCT--TTTHHHHHHTS
T ss_pred eeeehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhc---CH-HHHHHHHHHHc--CCCCCCcH--HHHHHHHHHHh
Confidence 88887655 4799999 55666653221 22332 34 34444444444 26777553 23555655554
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=98.34 E-value=0.00029 Score=74.26 Aligned_cols=93 Identities=16% Similarity=0.267 Sum_probs=66.8
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEeC--
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS-- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~~-- 419 (479)
+|+.+.+ |+|+. ++|+.+++.++- +.+ | ..++.|++++|+|+|+....+ ....+ +.-+.|+.+.
T Consensus 353 ~~~~v~~-~~pq~---~~L~h~~~~~~v---th~-G-~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~ 423 (482)
T 2pq6_A 353 DRGLIAS-WCPQD---KVLNHPSIGGFL---THC-G-WNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN 423 (482)
T ss_dssp TTEEEES-CCCHH---HHHTSTTEEEEE---ECC-C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSS
T ss_pred CCEEEEe-ecCHH---HHhcCCCCCEEE---ecC-C-cchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCC
Confidence 6788888 78875 488777763332 222 1 248999999999999997544 33444 3567788884
Q ss_pred -CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 420 -SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 420 -~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+.+++++++.+++.+ ++ .+.+++++.+..
T Consensus 424 ~~~~~l~~~i~~ll~~----~~-~~~~r~~a~~l~ 453 (482)
T 2pq6_A 424 VKREELAKLINEVIAG----DK-GKKMKQKAMELK 453 (482)
T ss_dssp CCHHHHHHHHHHHHTS----HH-HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC----Cc-HHHHHHHHHHHH
Confidence 689999999999984 54 467888877754
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.33 E-value=9e-06 Score=89.94 Aligned_cols=137 Identities=14% Similarity=0.104 Sum_probs=98.6
Q ss_pred CCCCCeEEEEEecCCCCCCHHH-HHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC-ChHHH
Q 011690 260 KPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKESY 337 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~K~~~~-lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~-~~~~l 337 (479)
.++.+ +++.+.|++.+|+.+. ++..+..+.+- .+........+.|++.|+|. .-+.-
T Consensus 513 dpd~l-~~~~vkRlheYKRq~Lnil~ii~~~~~i--------------------~~~~~~~~~p~q~If~GKA~P~y~~a 571 (796)
T 2c4m_A 513 DPESI-FDVQIKRLHEYKRQLMNALYVLDLYFRI--------------------KEDGLTDIPARTVIFGAKAAPGYVRA 571 (796)
T ss_dssp CTTSE-EEEEECCCCGGGTHHHHHHHHHHHHHHH--------------------HTSCCCSSCCEEEEEECCCCTTCHHH
T ss_pred CCCCc-EEEEeecchhhcccCEeHHHHHHHHHHH--------------------hhCCCCCCCCeEEEEEecCCHhHHHH
Confidence 44554 8999999999999999 88888777531 11101112359999999984 22222
Q ss_pred HHH---HHHc--------CC-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc
Q 011690 338 EEK---IRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 403 (479)
Q Consensus 338 ~~~---~~~~--------~l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~ 403 (479)
++. +.+. .. + +|.|+-. .+.+-...++++||+.+.|++. ..|..|+.=+=+|..|.+-|++--|
T Consensus 572 K~iIk~i~~va~~in~dp~~~~~lKVvFl~n-Y~vslA~~I~~gaDv~l~~S~a-~~EAsGTs~MKam~NGaL~iGtLDG 649 (796)
T 2c4m_A 572 KAIIKLINSIADLVNNDPEVSPLLKVVFVEN-YNVSPAEHILPASDVSEQISTA-GKEASGTSNMKFMMNGALTLGTMDG 649 (796)
T ss_dssp HHHHHHHHHHHHHHHTCTTTTTTEEEEEETT-CCHHHHHHHGGGCSEEEECCCT-TSCSCCHHHHHHHHTTCEEEEESST
T ss_pred HHHHHHHHHHHHHhccccccCCceEEEEECC-CCHHHHHHHhhhcceeecCCCC-CCCCCchHHHHHHHcCCeEEeccCC
Confidence 222 2222 23 4 6998876 6788888999999999999543 3567788889999999999999888
Q ss_pred cchhcccc--CccEEEeC
Q 011690 404 CIEELVKV--DKNGLLFS 419 (479)
Q Consensus 404 ~~~e~i~~--~~~G~l~~ 419 (479)
...|+.+. .+|||+|+
T Consensus 650 anvEi~e~vG~~NgF~FG 667 (796)
T 2c4m_A 650 ANVEIVDSVGEENAYIFG 667 (796)
T ss_dssp HHHHHHHHHCGGGSEEES
T ss_pred eEeehhhhcCCCcEEEec
Confidence 88887655 46999994
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=8.8e-06 Score=90.46 Aligned_cols=181 Identities=13% Similarity=0.080 Sum_probs=128.6
Q ss_pred cccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-
Q 011690 253 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG- 331 (479)
Q Consensus 253 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G- 331 (479)
.|..++++.+. +++.+..++. |=-+..++++..+.++ .|+.+|++...+
T Consensus 513 ~R~~~gLp~~~-v~f~~fN~~~--Ki~p~~~~~W~~IL~~---------------------------vP~S~L~Ll~~~~ 562 (723)
T 4gyw_A 513 TRSQYGLPEDA-IVYCNFNQLY--KIDPSTLQMWANILKR---------------------------VPNSVLWLLRFPA 562 (723)
T ss_dssp EGGGGTCCTTS-EEEECCSCGG--GCCHHHHHHHHHHHHH---------------------------CSSEEEEEEETTG
T ss_pred chhhcCCCCCC-EEEEeCCccc--cCCHHHHHHHHHHHHh---------------------------CCCCeEEEEeCcH
Confidence 45677787665 3554444443 6677888998888876 899999887754
Q ss_pred CChHHHHHHHHHcCC--CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccch---
Q 011690 332 PDKESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE--- 406 (479)
Q Consensus 332 ~~~~~l~~~~~~~~l--~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~--- 406 (479)
...+.+++.+++.|+ ++|.|.+. .+.++....++.+||++=|... +=+++..||+.||+|||+-....+.
T Consensus 563 ~~~~~l~~~~~~~gi~~~r~~f~~~-~~~~~~l~~~~~~Di~LDt~p~----~g~tT~~eal~~GvPvvt~~g~~~~sR~ 637 (723)
T 4gyw_A 563 VGEPNIQQYAQNMGLPQNRIIFSPV-APKEEHVRRGQLADVCLDTPLC----NGHTTGMDVLWAGTPMVTMPGETLASRV 637 (723)
T ss_dssp GGHHHHHHHHHHTTCCGGGEEEEEC-CCHHHHHHHGGGCSEEECCSSS----CCSHHHHHHHHTTCCEEBCCCSSGGGTH
T ss_pred HHHHHHHHHHHhcCCCcCeEEECCC-CCHHHHHHHhCCCeEEeCCCCc----CCHHHHHHHHHcCCCEEEccCCCccHhH
Confidence 345678888889998 58999997 9999999999999999975322 2356999999999999997533221
Q ss_pred --hcccc-CccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh------hhhchHHHHHHHHHHHHHH
Q 011690 407 --ELVKV-DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG------LSARWATEWEEHAKPLITE 472 (479)
Q Consensus 407 --e~i~~-~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~w~~~~~~~~~~~~~~ 472 (479)
.++.. |-.-++..|.++..+.-.+|.+ |++.+..+|+..++.. ....|..+.|+....++++
T Consensus 638 ~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~----d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 638 AASQLTCLGCLELIAKNRQEYEDIAVKLGT----DLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHTCGGGBCSSHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcccccCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 12211 2233456889999999999999 5888888887766532 2334555555555555443
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=0.0029 Score=66.32 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=56.1
Q ss_pred CcEEEecCCCCcchHHHHHH--cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhc-cccCccEEEe-
Q 011690 347 KRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEEL-VKVDKNGLLF- 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~-i~~~~~G~l~- 418 (479)
+++...+ |+|+. .+|+ ++|++|. ..| ..++.|++++|+|+|+....+ .... ++..+.|+.+
T Consensus 332 ~~~~v~~-w~pq~---~vL~h~~~~~fvt----h~G---~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~ 400 (463)
T 2acv_A 332 GKGMICG-WAPQV---EVLAHKAIGGFVS----HCG---WNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR 400 (463)
T ss_dssp CSEEEES-SCCHH---HHHHSTTEEEEEE----CCC---HHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC
T ss_pred CCEEEEc-cCCHH---HHhCCCccCeEEe----cCC---chhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEe
Confidence 4678888 78875 4676 5777774 122 248999999999999997543 3344 4667788887
Q ss_pred C---------CHHHHHHHHHHHHh
Q 011690 419 S---------SSSELADQLLMLFK 433 (479)
Q Consensus 419 ~---------~~~~la~~l~~l~~ 433 (479)
. +.+++++++.++++
T Consensus 401 ~~~~~~~~~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 401 VDYRKGSDVVAAEEIEKGLKDLMD 424 (463)
T ss_dssp SSCCTTCCCCCHHHHHHHHHHHTC
T ss_pred cccCCCCccccHHHHHHHHHHHHh
Confidence 2 47899999999996
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=0.0021 Score=67.71 Aligned_cols=90 Identities=19% Similarity=0.207 Sum_probs=60.7
Q ss_pred EEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEeC----
Q 011690 349 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS---- 419 (479)
Q Consensus 349 V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~~---- 419 (479)
+...+ |+|+. ++|+.+++.++- +.+ |. .+++||+++|+|+|+-...+ ....+ +.-+.|+.+.
T Consensus 341 ~~v~~-w~Pq~---~vL~h~~v~~fv---tHg-G~-~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~ 411 (480)
T 2vch_A 341 FVIPF-WAPQA---QVLAHPSTGGFL---THC-GW-NSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDD 411 (480)
T ss_dssp EEEES-CCCHH---HHHHSTTEEEEE---ECC-CH-HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTT
T ss_pred EEEeC-ccCHH---HHhCCCCcCeEE---ecc-cc-hhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccC
Confidence 44445 78875 689999964443 222 23 38999999999999987543 33443 5667787762
Q ss_pred ---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Q 011690 420 ---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEM 452 (479)
Q Consensus 420 ---~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~ 452 (479)
+.+++++++.+++.+ + .-..+++++.++
T Consensus 412 ~~~~~~~l~~av~~vl~~----~-~~~~~r~~a~~l 442 (480)
T 2vch_A 412 GLVRREEVARVVKGLMEG----E-EGKGVRNKMKEL 442 (480)
T ss_dssp SCCCHHHHHHHHHHHHTS----T-HHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHhcC----c-chHHHHHHHHHH
Confidence 478999999999984 2 334455555554
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=98.07 E-value=0.00051 Score=69.37 Aligned_cols=111 Identities=14% Similarity=0.119 Sum_probs=76.4
Q ss_pred cCCCCCeEEEEEecCCCCCCH--HHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHH
Q 011690 259 LKPNRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 336 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~--~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~ 336 (479)
+.++++.+++..|.-.+.|.. +...+.+..+.++ +.+++++|...+.+.
T Consensus 181 ~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-----------------------------g~~vvl~g~~~e~~~ 231 (349)
T 3tov_A 181 LTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL-----------------------------GYKTVFFGGPMDLEM 231 (349)
T ss_dssp CCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-----------------------------TCEEEECCCTTTHHH
T ss_pred CCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-----------------------------CCeEEEEeCcchHHH
Confidence 445567677776653345544 5677777777653 467777886666666
Q ss_pred HHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchh
Q 011690 337 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE 407 (479)
Q Consensus 337 l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e 407 (479)
.++.++..+...+.+.|. .+-.++..+++.||++|.. .+| ..-+ |.++|+|+|+--.+..+.
T Consensus 232 ~~~i~~~~~~~~~~l~g~-~sl~e~~ali~~a~~~i~~---DsG----~~Hl-Aaa~g~P~v~lfg~t~p~ 293 (349)
T 3tov_A 232 VQPVVEQMETKPIVATGK-FQLGPLAAAMNRCNLLITN---DSG----PMHV-GISQGVPIVALYGPSNPF 293 (349)
T ss_dssp HHHHHHTCSSCCEECTTC-CCHHHHHHHHHTCSEEEEE---SSH----HHHH-HHTTTCCEEEECSSCCHH
T ss_pred HHHHHHhcccccEEeeCC-CCHHHHHHHHHhCCEEEEC---CCC----HHHH-HHhcCCCEEEEECCCCcc
Confidence 666655554345778887 8899999999999999975 343 2444 899999999975444333
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=98.00 E-value=0.00011 Score=73.22 Aligned_cols=105 Identities=16% Similarity=0.148 Sum_probs=71.7
Q ss_pred cCCCCCeEEEEEec-CCCCCCHH--HHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChH
Q 011690 259 LKPNRPALVVSSTS-WTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 335 (479)
Q Consensus 259 ~~~~~~~~i~~~g~-~~~~K~~~--~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~ 335 (479)
+..+++.+++..|. ..+.|... .+.++++.+.+ . +++++++|...+.+
T Consensus 176 ~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~----------------------------~-~~~vvl~g~~~e~~ 226 (348)
T 1psw_A 176 LSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID----------------------------E-GYQVVLFGSAKDHE 226 (348)
T ss_dssp CCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH----------------------------T-TCEEEECCCGGGHH
T ss_pred CCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHH----------------------------C-CCeEEEEeChhhHH
Confidence 33355667777776 65666654 77787777764 2 57888888655544
Q ss_pred HHHHHHHHcC----CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec
Q 011690 336 SYEEKIRRLR----LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 401 (479)
Q Consensus 336 ~l~~~~~~~~----l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~ 401 (479)
..++..+..+ ...+.+.|. .+-.++..+++.||++|.. ++| .+--|.|+|+|+|+--
T Consensus 227 ~~~~i~~~~~~~~~~~~~~l~g~-~sl~e~~ali~~a~l~I~~---Dsg-----~~HlAaa~g~P~v~lf 287 (348)
T 1psw_A 227 AGNEILAALNTEQQAWCRNLAGE-TQLDQAVILIAACKAIVTN---DSG-----LMHVAAALNRPLVALY 287 (348)
T ss_dssp HHHHHHTTSCHHHHTTEEECTTT-SCHHHHHHHHHTSSEEEEE---SSH-----HHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhhhhccccceEeccCc-CCHHHHHHHHHhCCEEEec---CCH-----HHHHHHHcCCCEEEEE
Confidence 4444433222 123567787 8899999999999999975 444 2333999999999874
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=0.0016 Score=64.01 Aligned_cols=67 Identities=12% Similarity=0.113 Sum_probs=52.2
Q ss_pred EEEEEecC-CChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 324 LFIITGKG-PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 324 ~l~IvG~G-~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
..+|.|.| +..+++++.+++. .++.+.++ .+++++++++||++|++ . |+++.|++++|+|.|....
T Consensus 186 i~vv~G~~~~~~~~l~~~~~~~--~~v~v~~~---~~~m~~~m~~aDlvI~~----g----G~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 186 ISIATSSSNPNLKKLQKFAKLH--NNIRLFID---HENIAKLMNESNKLIIS----A----SSLVNEALLLKANFKAICY 252 (282)
T ss_dssp EEEEECTTCTTHHHHHHHHHTC--SSEEEEES---CSCHHHHHHTEEEEEEE----S----SHHHHHHHHTTCCEEEECC
T ss_pred EEEEECCCchHHHHHHHHHhhC--CCEEEEeC---HHHHHHHHHHCCEEEEC----C----cHHHHHHHHcCCCEEEEeC
Confidence 44677876 4556677665542 58999998 89999999999999974 2 2499999999999998764
Q ss_pred c
Q 011690 403 S 403 (479)
Q Consensus 403 ~ 403 (479)
.
T Consensus 253 ~ 253 (282)
T 3hbm_A 253 V 253 (282)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00023 Score=79.07 Aligned_cols=183 Identities=13% Similarity=0.090 Sum_probs=119.0
Q ss_pred CCCCCeEEEEEecCCCCCCHHHH-HHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCC-ChHH-
Q 011690 260 KPNRPALVVSSTSWTPDEDFGIL-LEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKES- 336 (479)
Q Consensus 260 ~~~~~~~i~~~g~~~~~K~~~~l-ieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~-~~~~- 336 (479)
.++.+ +++.+.|++.+|+.+.+ +..+..+.+- .+.......+..|++.|+|. .-+.
T Consensus 547 dpd~l-~~g~vkRl~eYKRq~L~~l~~i~~~~~i--------------------~~~~~~~~~p~q~If~GKA~P~y~~a 605 (824)
T 2gj4_A 547 NPNSL-FDVQVKRIHEYKRQLLNCLHVITLYNRI--------------------KKEPNKFVVPRTVMIGGKAAPGYHMA 605 (824)
T ss_dssp CTTSE-EEEEESCCCGGGTHHHHHHHHHHHHHHH--------------------HHCTTSCCCCEEEEEECCCCTTCHHH
T ss_pred CCCcc-eEeeeecchhhcchhhHHHHHHHHHHHH--------------------HhCCCCCCCCEEEEEEEeCCHhHHHH
Confidence 45554 89999999999999998 7777776421 00000112258999999984 2222
Q ss_pred ------HHHHHHHcC----C-C--cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc
Q 011690 337 ------YEEKIRRLR----L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 403 (479)
Q Consensus 337 ------l~~~~~~~~----l-~--~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~ 403 (479)
+.+.++..+ + + +|.|+-. .+.+-...++++||+.+.|++. ..|..|+.=+=+|..|.+-|++--|
T Consensus 606 K~iIkli~~va~~in~Dp~v~~~lKVvFl~n-YdvslA~~I~~gaDv~l~~S~a-g~EAsGTs~MKamlNGaLtigtlDG 683 (824)
T 2gj4_A 606 KMIIKLITAIGDVVNHDPVVGDRLRVIFLEN-YRVSLAEKVIPAADLSEQISTA-GTEASGTGNMKFMLNGALTIGTMDG 683 (824)
T ss_dssp HHHHHHHHHHHHHHTTCTTTGGGEEEEEETT-CCHHHHHHHGGGCSEEEECCCT-TSCSCCSHHHHHHHTTCEEEECSCT
T ss_pred HHHHHHHHHHHHHhccCcccCCceEEEEECC-CCHHHHHHHhhhcceeecCCCC-CCCCCchHHHHHHHcCceEEEEecC
Confidence 333333321 2 3 6888876 6778888999999999999543 2566677888899999999999877
Q ss_pred cchhccc--cCccEEEeC-CHHHHHHHHH-------HHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHH
Q 011690 404 CIEELVK--VDKNGLLFS-SSSELADQLL-------MLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 473 (479)
Q Consensus 404 ~~~e~i~--~~~~G~l~~-~~~~la~~l~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 473 (479)
..-|+.+ ..+|||+|+ .++++ +.+. .+.+. +++ ++.+-+++.. ..++|... +...+|++.+
T Consensus 684 anvEi~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~---~~~-l~~v~d~i~~--g~fs~~~~--~~y~~ly~~l 754 (824)
T 2gj4_A 684 ANVEMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDR---IPE-LRQIIEQLSS--GFFSPKQP--DLFKDIVNML 754 (824)
T ss_dssp THHHHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHH---CHH-HHHHHHHHHH--TTTCTTST--TTTHHHHHHH
T ss_pred ccchhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcC---CHH-HHHHHHHHHh--CCCCCCCh--HHHHHHHHHH
Confidence 7767764 467899994 46666 4332 23342 333 3333333333 36777665 2356666666
Q ss_pred H
Q 011690 474 I 474 (479)
Q Consensus 474 ~ 474 (479)
+
T Consensus 755 ~ 755 (824)
T 2gj4_A 755 M 755 (824)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.018 Score=63.66 Aligned_cols=68 Identities=21% Similarity=0.061 Sum_probs=49.3
Q ss_pred cchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC---------ccchhccccCccEEEeCCHHHHHHHH
Q 011690 358 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY---------SCIEELVKVDKNGLLFSSSSELADQL 428 (479)
Q Consensus 358 ~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~---------~~~~e~i~~~~~G~l~~~~~~la~~l 428 (479)
..++.+++..||++|.= .++ +++|++..++|||.... .|.-.-+.+.--|-++.+.++|.++|
T Consensus 606 ~~di~~ll~~aD~lITD---ySS-----v~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~~~eL~~~i 677 (729)
T 3l7i_A 606 YNDVSELFLISDCLITD---YSS-----VMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTEPYGLAKEL 677 (729)
T ss_dssp CSCHHHHHHTCSEEEES---SCT-----HHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESSHHHHHHHH
T ss_pred CcCHHHHHHHhCEEEee---chH-----HHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECCHHHHHHHH
Confidence 56899999999999951 233 89999999999998831 11111122234577788899999999
Q ss_pred HHHHh
Q 011690 429 LMLFK 433 (479)
Q Consensus 429 ~~l~~ 433 (479)
.....
T Consensus 678 ~~~~~ 682 (729)
T 3l7i_A 678 KNLDK 682 (729)
T ss_dssp TTHHH
T ss_pred hhhhc
Confidence 87765
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0024 Score=60.78 Aligned_cols=73 Identities=10% Similarity=0.014 Sum_probs=51.8
Q ss_pred cEEEecCCCCcchHHHHHH-cCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc---c-----hhccccCccEEEe
Q 011690 348 RVAFRTMWLSAEDYPLLLG-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC---I-----EELVKVDKNGLLF 418 (479)
Q Consensus 348 ~V~f~G~~~~~~~~~~~l~-~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~---~-----~e~i~~~~~G~l~ 418 (479)
++...++ .+++..+|+ .||++|+ -.| ..++.|++++|+|.|...... . .+.+.....+++.
T Consensus 115 ~v~v~~f---~~~m~~~l~~~AdlvIs----haG---agTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~ 184 (224)
T 2jzc_A 115 KVIGFDF---STKMQSIIRDYSDLVIS----HAG---TGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC 184 (224)
T ss_dssp EEEECCS---SSSHHHHHHHHCSCEEE----SSC---HHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE
T ss_pred eEEEeec---cchHHHHHHhcCCEEEE----CCc---HHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc
Confidence 4556666 589999999 9999996 222 348999999999998886532 1 2334333345554
Q ss_pred CCHHHHHHHHHHH
Q 011690 419 SSSSELADQLLML 431 (479)
Q Consensus 419 ~~~~~la~~l~~l 431 (479)
+++.|++++.++
T Consensus 185 -~~~~L~~~i~~l 196 (224)
T 2jzc_A 185 -APTETGLIAGLR 196 (224)
T ss_dssp -CSCTTTHHHHHH
T ss_pred -CHHHHHHHHHHH
Confidence 677788888777
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=94.72 E-value=0.092 Score=51.53 Aligned_cols=133 Identities=13% Similarity=0.089 Sum_probs=78.8
Q ss_pred CCCeEEEEEecCCCCCCHH--HHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChHHHHH
Q 011690 262 NRPALVVSSTSWTPDEDFG--ILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 339 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~--~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~~l~~ 339 (479)
+++.+++..|.=.+.|... .+.+.++.+.+ .+.++++.+.++....+.+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~-----------------------------~~~~vvl~~g~~~e~~~~~ 227 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLAD-----------------------------SGIRIKLPWGAPHEEERAK 227 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTT-----------------------------TCCEEEECCSSHHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHH-----------------------------CCCcEEEecCCHHHHHHHH
Confidence 4455666666444555544 56666655532 2577777643443333333
Q ss_pred HHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhcccc-CccEEEe
Q 011690 340 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV-DKNGLLF 418 (479)
Q Consensus 340 ~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~-~~~G~l~ 418 (479)
.+.+. .+++.+.|. .+-.+...+++.||++|.. .+| ..-+ |.|+|+|+|+--.+..++.... +....++
T Consensus 228 ~i~~~-~~~~~l~g~-~sl~el~ali~~a~l~I~~---DSG----~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~ 297 (326)
T 2gt1_A 228 RLAEG-FAYVEVLPK-MSLEGVARVLAGAKFVVSV---DTG----LSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVC 297 (326)
T ss_dssp HHHTT-CTTEEECCC-CCHHHHHHHHHTCSEEEEE---SSH----HHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEE
T ss_pred HHHhh-CCcccccCC-CCHHHHHHHHHhCCEEEec---CCc----HHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEe
Confidence 33321 345778897 8999999999999999975 344 2445 6679999998743322222111 1111211
Q ss_pred ---------CCHHHHHHHHHHHHh
Q 011690 419 ---------SSSSELADQLLMLFK 433 (479)
Q Consensus 419 ---------~~~~~la~~l~~l~~ 433 (479)
-+++++.+++.++++
T Consensus 298 ~~~~~cm~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 298 RAPGNELSQLTANAVKQFIEENAE 321 (326)
T ss_dssp ECGGGCGGGCCHHHHHHHHHHTTT
T ss_pred cCCcccccCCCHHHHHHHHHHHHH
Confidence 147788888887776
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 479 | ||||
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 8e-05 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 42.5 bits (98), Expect = 8e-05
Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 10/162 (6%)
Query: 317 QYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHT 376
+ + + FII GKG + + + V T LS E L GS D +
Sbjct: 278 KKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVD---FVII 334
Query: 377 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLMLFKG 434
S + ++ G A + + +++ ++ G+L ELA+ +L +
Sbjct: 335 PSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGDPGELANAILKALE- 392
Query: 435 FPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEVISQ 476
L K R + +S W E + K T I +
Sbjct: 393 --LSRSDLSKFRENCKKRAMSFSWEKSAERYVK-AYTGSIDR 431
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 479 | |||
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.9 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.89 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.83 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.26 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.07 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.94 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.92 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.7 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.69 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.48 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.4 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.19 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 97.69 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.22 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 96.91 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 94.51 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 94.25 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 91.23 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 84.14 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=3.2e-34 Score=292.75 Aligned_cols=371 Identities=17% Similarity=0.146 Sum_probs=242.8
Q ss_pred HHHHHHhhCCCcEEEEecCCCCCccc-----------------ccCCCCeEEEEeecCCCCC--CCCCchhHHHHHHHHH
Q 011690 24 QALSLARQMSLEVDVVAYGGSKPHAA-----------------ILEHPSIHIHTMTQWPTIP--RGLPKVLKPVLLLLKP 84 (479)
Q Consensus 24 ~a~~La~~~G~eV~Vv~~~~~~~~~~-----------------~~~~~gi~i~~~~~~~~~~--~~~~~~~~~~~~l~~~ 84 (479)
.+..|+++ ||+|+|+|+..+..... .....++++++++...... ...+.....+.....+
T Consensus 25 La~~L~~~-Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (437)
T d2bisa1 25 ISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTF 103 (437)
T ss_dssp HHHHHHHT-TCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEESSGGGCSCTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHc-CCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecCccccccccccccchhhHHHHHHHH
Confidence 45666775 99999999754321110 0112467777766221111 1111111111111111
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhh---hhcCCCchhHHHHHHHhH
Q 011690 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS---LSLGRRSHFVSIYRCFSV 161 (479)
Q Consensus 85 l~~~~~~~~~l~~~~~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~---~~~~~~~~~~~~~~~~~~ 161 (479)
-......+..+..+...||+||+|+ ..+..++.++++..++|+|++.|+..+.... .......... .+..
T Consensus 104 ~~~~~~~~~~~~~~~~~pDiIh~~~---~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~----~~~~ 176 (437)
T d2bisa1 104 GRASVLLLNDLLREEPLPDVVHFHD---WHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELA----PYPD 176 (437)
T ss_dssp HHHHHHHHHHHTTSSCCCSEEEEET---GGGHHHHHHHHHHHCCCEEEEESSCCCCCEEHHHHHHTTCGGGC----CSSE
T ss_pred HHHHHHHHHHHHhcCCCCCEEEECC---hhhhhHhhhhhccccCceeEEEeeccccccchhhhhhccchhhh----hHHH
Confidence 1222233444554556799999998 4556667778888899999999987521110 0000000000 0000
Q ss_pred HHHHHHHhhcCCEEEEeCHHHHHHHHHhhC---CeEEEecCC-CCCCCCCCC----hH-HHHHHHHhhhhcccCCCCccc
Q 011690 162 LRIEKYYGKMANGCLCVTQAMQHELAQNWG---IKATVLYDQ-PPEFFHPTS----LE-EKHELFCRLNKILHQPLGVQD 232 (479)
Q Consensus 162 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~---~~~~vi~n~-~~~~f~~~~----~~-~~~~~~~~~~~~~~~~~~~~~ 232 (479)
...++...+.+|.++++++.........++ .++.++||| +.+.|.+.. .. .+..+..++
T Consensus 177 ~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~------------ 244 (437)
T d2bisa1 177 IDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKF------------ 244 (437)
T ss_dssp ECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHT------------
T ss_pred HHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccchhhHHHHHhhhhhh------------
Confidence 112555667799999999988876555443 348999999 777776531 11 112222221
Q ss_pred cccccccCCcccccchhccccccccccCCCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhh
Q 011690 233 CVSNAGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE 311 (479)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~ 311 (479)
+.. + ...++++|++. +.||++.+++|+..+.++
T Consensus 245 -------------------------~~~-~-~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~------------------- 278 (437)
T d2bisa1 245 -------------------------GMD-E-GVTFMFIGRFDRGQKGVDVLLKAIEILSSK------------------- 278 (437)
T ss_dssp -------------------------TCC-S-CEEEEEESCBCSSSSCHHHHHHHHHHHTTS-------------------
T ss_pred -------------------------hcc-C-CceEEEeecccccchhHHHHHhhhcccccc-------------------
Confidence 221 2 34799999986 579999999999987542
Q ss_pred hccCcccCCCCEEEEEEecCCChHH-HHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHH
Q 011690 312 ISDGKQYLYPRLLFIITGKGPDKES-YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD 389 (479)
Q Consensus 312 ~~~~~~~~~p~~~l~IvG~G~~~~~-l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llE 389 (479)
...|+++|+|+|.|+.... ..+...+ .. ..+.|.|. ++.+++..++++||++++| |..|++|++++|
T Consensus 279 ------~~~~~~~lvi~G~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~adi~v~~---s~~e~~~~~~~E 347 (437)
T d2bisa1 279 ------KEFQEMRFIIIGKGDPELEGWARSLEE-KHGNVKVITEM-LSREFVRELYGSVDFVIIP---SYFEPFGLVALE 347 (437)
T ss_dssp ------GGGGGEEEEEECCBCHHHHHHHHHHHH-TCTTEEEECSC-CCHHHHHHHHTTCSEEEEC---CSCCSSCHHHHH
T ss_pred ------cccccceeeeecccccccccchhhhcc-ccccceecccc-CcHHHHHHHHhhhcccccc---ccccccchHHHH
Confidence 1257899999999975433 2222233 34 45666675 9999999999999999998 677899999999
Q ss_pred HHhCCCcEEEecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHH
Q 011690 390 MFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAK 467 (479)
Q Consensus 390 ama~G~PVIas~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 467 (479)
||+||+|||+|+.|+..|++++ ++|+++ .|+++||++|.+++++ +++.++.|++++++....++|+..-++ ..
T Consensus 348 ama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~~---~~~~~~~~~~~~~~~~~~~s~~~~a~~-~~ 422 (437)
T d2bisa1 348 AMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALEL---SRSDLSKFRENCKKRAMSFSWEKSAER-YV 422 (437)
T ss_dssp HHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHTT---TTSCTHHHHHHHHHHHHHSCHHHHHHH-HH
T ss_pred HHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhCCHHHHHHH-HH
Confidence 9999999999999999999875 589998 5799999999999985 567889999999987777888877654 45
Q ss_pred HHHHHHHhh
Q 011690 468 PLITEVISQ 476 (479)
Q Consensus 468 ~~~~~~~~~ 476 (479)
++++.++.+
T Consensus 423 ~iY~~~i~r 431 (437)
T d2bisa1 423 KAYTGSIDR 431 (437)
T ss_dssp HHHHTCSCC
T ss_pred HHHHHHHHh
Confidence 567766644
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.6e-34 Score=284.21 Aligned_cols=226 Identities=13% Similarity=0.107 Sum_probs=182.0
Q ss_pred hcCCEEEEeCHHHHHHHHHhhCCe---EEEecCC-CCCCCCCC-ChHHHHHHHHhhhhcccCCCCccccccccccCCccc
Q 011690 170 KMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKA 244 (479)
Q Consensus 170 ~~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (479)
..++.+++.++...+.+.+.++.+ +.++||| +++.+.+. ....+......
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~------------------------- 188 (370)
T d2iw1a1 134 GKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQK------------------------- 188 (370)
T ss_dssp TCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHH-------------------------
T ss_pred ccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhc-------------------------
Confidence 357889999999998888877765 8899999 65544332 22233332222
Q ss_pred ccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEE
Q 011690 245 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 324 (479)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 324 (479)
.+++++++ +++++|++.+.||++.+++|++.+.++ .++..
T Consensus 189 ------------~~~~~~~~-~i~~~gr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~ 228 (370)
T d2iw1a1 189 ------------NGIKEQQN-LLLQVGSDFGRKGVDRSIEALASLPES---------------------------LRHNT 228 (370)
T ss_dssp ------------TTCCTTCE-EEEEECSCTTTTTHHHHHHHHHTSCHH---------------------------HHHTE
T ss_pred ------------cCCCccce-EEEEEeccccccchhhhcccccccccc---------------------------cccce
Confidence 23445554 899999999999999999999998775 56677
Q ss_pred EEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc
Q 011690 325 FIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 403 (479)
Q Consensus 325 l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~ 403 (479)
+.++|.++..+.+++.+++++. +++.|+|. .+++.++|++||++|+| |..|++|++++|||+||+|||+|+.+
T Consensus 229 ~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adv~v~p---s~~E~~~~~~~EAma~G~PvI~s~~~ 302 (370)
T d2iw1a1 229 LLFVVGQDKPRKFEALAEKLGVRSNVHFFSG---RNDVSELMAAADLLLHP---AYQEAAGIVLLEAITAGLPVLTTAVC 302 (370)
T ss_dssp EEEEESSSCCHHHHHHHHHHTCGGGEEEESC---CSCHHHHHHHCSEEEEC---CSCCSSCHHHHHHHHHTCCEEEETTS
T ss_pred eeecccccccccccccccccccccccccccc---ccccccccccccccccc---cccccccceeeecccCCeeEEEeCCC
Confidence 7777777777889999999988 78999997 78999999999999998 66789999999999999999999999
Q ss_pred cchhccccCccEEEe---CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHH
Q 011690 404 CIEELVKVDKNGLLF---SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLIT 471 (479)
Q Consensus 404 ~~~e~i~~~~~G~l~---~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 471 (479)
+.+|++.++.+|+++ .|+++|+++|.++++ |++.+++|+++|++....++| .+|.+.++++++
T Consensus 303 g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~----d~~~~~~~~~~ar~~~~~~~~-~~~~~~~~~ii~ 368 (370)
T d2iw1a1 303 GYAHYIADANCGTVIAEPFSQEQLNEVLRKALT----QSPLRMAWAENARHYADTQDL-YSLPEKAADIIT 368 (370)
T ss_dssp TTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHSCC-SCHHHHHHHHHH
T ss_pred ChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHhCh-hHHHHHHHHHHh
Confidence 999999999999876 479999999999999 699999999999886544433 245555555543
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=5e-33 Score=291.34 Aligned_cols=315 Identities=11% Similarity=0.086 Sum_probs=207.6
Q ss_pred CCCcEEEEeCCCCcchHHHHHHH--HHhcCCcEEEEecCchhhh------hhhhcCCCchhH-HHHHHHhHHHHHHHHhh
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWA--SSLRRSAFIVDWHNFGYTL------LSLSLGRRSHFV-SIYRCFSVLRIEKYYGK 170 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~--~~~~~~~~ii~~h~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~ 170 (479)
.+|||||+|+ ..+...+.++ ....++|+|.|.|+..+.. +.........+. ....++.....++....
T Consensus 129 ~~pDIvH~h~---~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (477)
T d1rzua_ 129 WRPDMVHAHD---WQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQ 205 (477)
T ss_dssp CCCSEEEEEH---HHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHH
T ss_pred CCCCEEEecc---hhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHH
Confidence 5899999998 3332222222 3445799999999864211 100000000000 00000000112445556
Q ss_pred cCCEEEEeCHHHHHHHHHh-h-----------CCeEEEecCC-CCCCCCCCChHHHHHHHHhhhhcccCCCCcccccccc
Q 011690 171 MANGCLCVTQAMQHELAQN-W-----------GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNA 237 (479)
Q Consensus 171 ~ad~vi~vS~~~~~~l~~~-~-----------~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (479)
.+|.++++|....+..... + ..++.+|+|| +.+.|.|.....-.. . ....
T Consensus 206 ~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~---~--------------~~~~ 268 (477)
T d1rzua_ 206 TATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHD---N--------------YSAA 268 (477)
T ss_dssp HCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSS---C--------------CBTT
T ss_pred hhhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccc---c--------------chhh
Confidence 7999999999877654321 1 1238899999 777776642110000 0 0000
Q ss_pred ccCCcccccchhccccccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcc
Q 011690 238 GMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 317 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (479)
........... .+...++..++..+|+++||+.++||++.|++|+..+.++
T Consensus 269 ~~~~~~~~~~~----~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~------------------------- 319 (477)
T d1rzua_ 269 NLKNRALNKKA----VAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL------------------------- 319 (477)
T ss_dssp BCTTHHHHHHH----HHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT-------------------------
T ss_pred hHHHhhhhHHH----HHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhh-------------------------
Confidence 00000000000 0111233333344899999999999999999999998653
Q ss_pred cCCCCEEEEEEecCCChHHHHHHHHHcCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCc
Q 011690 318 YLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP 396 (479)
Q Consensus 318 ~~~p~~~l~IvG~G~~~~~l~~~~~~~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~P 396 (479)
+.+|+++|.|+.....+......++ .+|.|.|. .+.++...++++||++|+| |..|+||++++|||+||+|
T Consensus 320 ----~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~aD~~v~P---S~~E~fglv~lEAma~G~P 391 (477)
T d1rzua_ 320 ----GGRLVVLGAGDVALEGALLAAASRHHGRVGVAIG-YNEPLSHLMQAGCDAIIIP---SRFEPCGLTQLYALRYGCI 391 (477)
T ss_dssp ----TCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEES-CCHHHHHHHHHHCSEEEEC---CSCCSSCSHHHHHHHHTCE
T ss_pred ----CCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcc-cChhHHHHHHHhCccccCC---ccccCCCHHHHHHHHcCCC
Confidence 5788999998755444333333334 78999997 8888999999999999999 6679999999999999999
Q ss_pred EEEecCccchhccccCc---------cEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHH
Q 011690 397 VCAVSYSCIEELVKVDK---------NGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEH 465 (479)
Q Consensus 397 VIas~~~~~~e~i~~~~---------~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 465 (479)
||+|+.||++|+|.+++ +|+++ .|+++|+++|.++++.. ++++.+++|++++.+ ..++|+..-++
T Consensus 392 vVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~-~~~~~~~~~~~~a~~--~~fsw~~~a~~- 467 (477)
T d1rzua_ 392 PVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYY-HDPKLWTQMQKLGMK--SDVSWEKSAGL- 467 (477)
T ss_dssp EEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHT--CCCBHHHHHHH-
T ss_pred EEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhh-CCHHHHHHHHHHHHH--hhCCHHHHHHH-
Confidence 99999999999998875 89999 57999999999888742 279999999998865 37999988766
Q ss_pred HHHHHHHHHh
Q 011690 466 AKPLITEVIS 475 (479)
Q Consensus 466 ~~~~~~~~~~ 475 (479)
..++++++++
T Consensus 468 ~~~lY~~ll~ 477 (477)
T d1rzua_ 468 YAALYSQLIS 477 (477)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhC
Confidence 5668888764
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.90 E-value=3.3e-23 Score=191.57 Aligned_cols=161 Identities=18% Similarity=0.226 Sum_probs=129.3
Q ss_pred ccCCCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh-H
Q 011690 258 FLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-E 335 (479)
Q Consensus 258 ~~~~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~-~ 335 (479)
++ ++++ +++++||+. ++||++.+++|++.+.++ ...|+++|+|+|+|+.. +
T Consensus 28 ~l-~~~~-~il~~Grl~~~~Kg~~~li~a~~~l~~~-------------------------~~~~~~~l~i~G~g~~~~~ 80 (196)
T d2bfwa1 28 GM-DEGV-TFMFIGRFDRGQKGVDVLLKAIEILSSK-------------------------KEFQEMRFIIIGKGDPELE 80 (196)
T ss_dssp TC-CSCE-EEEEESCBCSSSSCHHHHHHHHHHHTTS-------------------------GGGGGEEEEEECCBCHHHH
T ss_pred CC-CCCC-EEEEEcCCCccccCHHHHHHHHHhhhcc-------------------------cCCCCeEEEEEeecccchh
Confidence 44 3444 789999996 689999999999988642 13688999999998643 2
Q ss_pred HHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccE
Q 011690 336 SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 415 (479)
Q Consensus 336 ~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G 415 (479)
.+.+.+.+.....+.+.| +++.+++..+|+.||++|+| +..+++|.+++|||+||+|||+++.++..|++.+ .+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~di~v~p---s~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g 155 (196)
T d2bfwa1 81 GWARSLEEKHGNVKVITE-MLSREFVRELYGSVDFVIIP---SYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETG 155 (196)
T ss_dssp HHHHHHHHHCTTEEEECS-CCCHHHHHHHHTTCSEEEEC---CSCCSSCHHHHHHHHTTCEEEEESCHHHHHHCCT-TTC
T ss_pred hhhhhhhhccceeEEeee-ccccccchhccccccccccc---cccccccccchhhhhcCceeeecCCCccceeecC-Cce
Confidence 222233222224455666 49999999999999999998 6678999999999999999999999999999865 689
Q ss_pred EEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 416 LLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 416 ~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
+++ .|+++++++|.++++. +++.++.++++|++..
T Consensus 156 ~~~~~~~~~~l~~~i~~~l~~---~~~~~~~~~~~a~~~a 192 (196)
T d2bfwa1 156 ILVKAGDPGELANAILKALEL---SRSDLSKFRENCKKRA 192 (196)
T ss_dssp EEECTTCHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHH
T ss_pred eeECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence 999 5699999999999985 6889999999999843
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=8.9e-23 Score=184.00 Aligned_cols=151 Identities=21% Similarity=0.232 Sum_probs=125.4
Q ss_pred CCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh---HHHH
Q 011690 262 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---ESYE 338 (479)
Q Consensus 262 ~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~---~~l~ 338 (479)
.++ .++++||+.|.||++.+|+|++.+ |+.+|+|+|.|+.. +.+.
T Consensus 11 ~~~-~~l~iGrl~~~K~~~~~i~a~~~l-------------------------------~~~~l~ivg~~~~~~~~~~~~ 58 (166)
T d2f9fa1 11 YGD-FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDHAERYA 58 (166)
T ss_dssp CCS-CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTSTHHHHH
T ss_pred CCC-EEEEEecCccccCHHHHHHHHHHh-------------------------------cCCeEEEEEecccccchhhhh
Confidence 344 477999999999999999999764 56789999976544 4454
Q ss_pred HHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCccchhccccCccEEEe
Q 011690 339 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 418 (479)
Q Consensus 339 ~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~~~e~i~~~~~G~l~ 418 (479)
+.+.+...++|.|+|. ++.+++..+|+.||++|+| |..|++|.+++|||+||+|||+++.++..|++.++.+|+++
T Consensus 59 ~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~p---s~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~ 134 (166)
T d2f9fa1 59 RKIMKIAPDNVKFLGS-VSEEELIDLYSRCKGLLCT---AKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV 134 (166)
T ss_dssp HHHHHHSCTTEEEEES-CCHHHHHHHHHHCSEEEEC---CSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE
T ss_pred hhhcccccCcEEEeec-ccccccccccccccccccc---cccccccccccccccccccceeecCCcceeeecCCcccccC
Confidence 5555555589999996 9999999999999999998 67789999999999999999999999999999999999988
Q ss_pred -CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 011690 419 -SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 451 (479)
Q Consensus 419 -~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~ 451 (479)
.|+++++++|.++++++ ...++.++++|++
T Consensus 135 ~~d~~~~~~~i~~l~~~~---~~~~~~~~~~a~~ 165 (166)
T d2f9fa1 135 NADVNEIIDAMKKVSKNP---DKFKKDCFRRAKE 165 (166)
T ss_dssp CSCHHHHHHHHHHHHHCT---TTTHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhCH---HHHHHHHHHHHhC
Confidence 67999999999999962 2334445555543
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=3.5e-19 Score=185.75 Aligned_cols=171 Identities=10% Similarity=0.099 Sum_probs=132.3
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCC----CEEEEEEecCCCh------
Q 011690 265 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP----RLLFIITGKGPDK------ 334 (479)
Q Consensus 265 ~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~l~IvG~G~~~------ 334 (479)
.+|+++||+.+.||++.+++|+..+.++ +| ++.|+.+|.|+..
T Consensus 255 ~~il~V~Rld~~KGi~~~l~A~~~~l~~---------------------------~p~~~~~v~lv~~~~~~~~~~~~~~ 307 (456)
T d1uqta_ 255 QNIFSVERLDYSKGLPERFLAYEALLEK---------------------------YPQHHGKIRYTQIAPTSRGDVQAYQ 307 (456)
T ss_dssp EEEEEECCBCGGGCHHHHHHHHHHHHHH---------------------------CGGGTTTEEEEEECCBCSTTSHHHH
T ss_pred eEEEEeCCCchhhchHHHHHHHHHHHHh---------------------------CccccccEEEEEEcCCcccchHHHH
Confidence 4999999999999999999999999876 44 4778888866432
Q ss_pred ---HHHHHHHHH-------cCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCc-----EE
Q 011690 335 ---ESYEEKIRR-------LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP-----VC 398 (479)
Q Consensus 335 ---~~l~~~~~~-------~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~P-----VI 398 (479)
.++++.+.+ .++ +.+.+.+. ++.+++..+|+.||++++| |..||||++++|||+||+| +|
T Consensus 308 ~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~-~~~~~l~a~~~~Adv~v~~---s~~EG~~lv~~Ea~a~~~p~~~g~lI 383 (456)
T d1uqta_ 308 DIRHQLENEAGRINGKYGQLGWTPLYYLNQH-FDRKLLMKIFRYSDVGLVT---PLRDGMNLVAKEYVAAQDPANPGVLV 383 (456)
T ss_dssp HHHHHHHHHHHHHHHHHCBTTBCSEEEECSC-CCHHHHHHHHHHCSEEEEC---CSSBSCCHHHHHHHHHSCTTSCCEEE
T ss_pred HHHHHHHHHHHHHHhhhccCCCCceeeccCC-cCHHHHhHHHhhhceeecC---CccCCCCcHHHHHHHhCCCCCCCcEE
Confidence 122222222 244 56888887 9999999999999999998 7779999999999999999 99
Q ss_pred EecCccchhccccCccEEEe--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHH
Q 011690 399 AVSYSCIEELVKVDKNGLLF--SSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKPLITEV 473 (479)
Q Consensus 399 as~~~~~~e~i~~~~~G~l~--~~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 473 (479)
+|+.+|.++.+. +|+++ .|++++|++|.+++++ ++++++++.+++++....++++ .|-+....-++++
T Consensus 384 lS~~~G~~~~l~---~g~lVnP~d~~~~A~ai~~aL~~---~~~er~~~~~~~~~~v~~~~~~-~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 384 LSQFAGAANELT---SALIVNPYDRDEVAAALDRALTM---SLAERISRHAEMLDVIVKNDIN-HWQECFISDLKQI 453 (456)
T ss_dssp EETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHHHTCHH-HHHHHHHHHHHHS
T ss_pred EeCCCCCHHHhC---CeEEECcCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHhh
Confidence 999999999984 38888 4799999999999996 5677777777777654444433 4544444444443
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.26 E-value=5.2e-10 Score=108.64 Aligned_cols=115 Identities=15% Similarity=0.183 Sum_probs=76.7
Q ss_pred EEEEEEecCCChHHHHHHHHHcCCCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 323 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 323 ~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
...+++|..................++...++ .+++.++++.||++|+- .| +.++.|++++|+|+|....
T Consensus 207 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f---~~~~~~lm~~adl~It~----~G---~~T~~Eal~~g~P~I~iP~ 276 (351)
T d1f0ka_ 207 VTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEF---IDDMAAAYAWADVVVCR----SG---ALTVSEIAAAGLPALFVPF 276 (351)
T ss_dssp EEEEEECCTTCHHHHHHHHHHTTCTTSEEESC---CSCHHHHHHHCSEEEEC----CC---HHHHHHHHHHTCCEEECCC
T ss_pred ceeeeeccccchhhhhhhhcccccccceeeee---hhhHHHHHHhCchhhcc----cc---chHHHHHHHhCCceeeeec
Confidence 44455554444333333333333357788887 68899999999999962 33 2489999999999998753
Q ss_pred c---c----chhccccCccEEEeCC----HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 011690 403 S---C----IEELVKVDKNGLLFSS----SSELADQLLMLFKGFPDDSDVLKKLRNGTLEMG 453 (479)
Q Consensus 403 ~---~----~~e~i~~~~~G~l~~~----~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
. + ..+.+++...|...+. .+.+.+.|..+ +++.+.+|++++++..
T Consensus 277 ~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l------~~~~~~~~~~~~~~~~ 332 (351)
T d1f0ka_ 277 QHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW------SRETLLTMAERARAAS 332 (351)
T ss_dssp CCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC------CHHHHHHHHHHHHHTC
T ss_pred ccCCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhh------CHHHHHHHHHHHHccC
Confidence 2 2 2456777778888742 45666655443 3677888999998753
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.07 E-value=7.5e-10 Score=108.59 Aligned_cols=76 Identities=12% Similarity=0.069 Sum_probs=59.9
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc--------chhccccCccEEEe
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--------IEELVKVDKNGLLF 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~--------~~e~i~~~~~G~l~ 418 (479)
+||.+.| |++. ..++..+|++|.. .| .+++.|||++|+|+|+....+ +.+.+.....|..+
T Consensus 270 ~~v~i~~-~~p~---~~ll~~a~~~v~h----gG---~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l 338 (391)
T d1pn3a_ 270 ADCFVVG-EVNL---QELFGRVAAAIHH----DS---AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAV 338 (391)
T ss_dssp TTCCEES-SCCH---HHHHTTSSCEEEE----SC---HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEE
T ss_pred CCEEEec-ccCH---HHHHhhccEEEec----Cc---hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEc
Confidence 6899999 5874 4578999999974 22 348999999999999987443 35667777789888
Q ss_pred --C--CHHHHHHHHHHHHh
Q 011690 419 --S--SSSELADQLLMLFK 433 (479)
Q Consensus 419 --~--~~~~la~~l~~l~~ 433 (479)
. ++++|+++|.++++
T Consensus 339 ~~~~~~~~~l~~~i~~~l~ 357 (391)
T d1pn3a_ 339 DGPVPTIDSLSAALDTALA 357 (391)
T ss_dssp CCSSCCHHHHHHHHHHHTS
T ss_pred CcCCCCHHHHHHHHHHHhC
Confidence 2 38899999999986
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.94 E-value=2.9e-08 Score=99.40 Aligned_cols=245 Identities=16% Similarity=0.135 Sum_probs=153.3
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCC-CchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+|+++. .....+++.+++...++|++ ..|.-..+ ... ........| ....+.||..+|.
T Consensus 87 ~kPD~vlv~G--Dr~e~la~a~aa~~~~ipi~-HiegG~rs-----g~~~~~~~de~~R--------~~iskls~~hf~~ 150 (373)
T d1v4va_ 87 MGADYVLVHG--DTLTTFAVAWAAFLEGIPVG-HVEAGLRS-----GNLKEPFPEEANR--------RLTDVLTDLDFAP 150 (373)
T ss_dssp TTCSEEEEES--SCHHHHHHHHHHHHTTCCEE-EETCCCCC-----SCTTSSTTHHHHH--------HHHHHHCSEEEES
T ss_pred cCcccccccc--cCccchhHHHHHHHhhhhhe-eecccccc-----cccccCcchhhhh--------hhhccccceeeec
Confidence 8999999998 23444555577788899965 33331100 000 111122222 2355679999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCCCCCCCCCCChHHHHHHH--HhhhhcccCCCCccccccccccCCcccccchhcccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELF--CRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLA 253 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (479)
++..++.+.+. |.+ +.++-+. .-..+. ..+..
T Consensus 151 t~~~~~~L~~~-Ge~~~~I~~vG~p-----------~~D~i~~~~~~~~------------------------------- 187 (373)
T d1v4va_ 151 TPLAKANLLKE-GKREEGILVTGQT-----------GVDAVLLAAKLGR------------------------------- 187 (373)
T ss_dssp SHHHHHHHHTT-TCCGGGEEECCCH-----------HHHHHHHHHHHCC-------------------------------
T ss_pred chhhhhhhhhh-cccccceeecccc-----------hhhHHHhhhhhcc-------------------------------
Confidence 99999998776 765 4444321 011111 01110
Q ss_pred ccccccCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCC
Q 011690 254 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 333 (479)
Q Consensus 254 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~ 333 (479)
... ..+.++.++++.-+-+..++...+++++..+.+. .+++.+++.....
T Consensus 188 -~~~-~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~---------------------------~~~~~~i~p~~~~- 237 (373)
T d1v4va_ 188 -LPE-GLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHLN- 237 (373)
T ss_dssp -CCT-TCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCSC-
T ss_pred -ccc-ccccccceeEEeccccccchHHHHHHHHHHHhhh---------------------------cccceeeeeeccc-
Confidence 011 1233445666655655556667777887777664 6666666554322
Q ss_pred hHHHHHHH-HHcC-CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEe-cCccchhccc
Q 011690 334 KESYEEKI-RRLR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVK 410 (479)
Q Consensus 334 ~~~l~~~~-~~~~-l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas-~~~~~~e~i~ 410 (479)
....... +... .+++.+... ++..++..+++.|++++- .|++ .+.||.++|+|+|.- +.+.-+|-++
T Consensus 238 -~~~~~~~~~~~~~~~n~~~~~~-l~~~~~l~ll~~s~~vig---nSss-----gi~Ea~~lg~P~Inir~~~eRqeg~~ 307 (373)
T d1v4va_ 238 -PVVREAVFPVLKGVRNFVLLDP-LEYGSMAALMRASLLLVT---DSGG-----LQEEGAALGVPVVVLRNVTERPEGLK 307 (373)
T ss_dssp -HHHHHHHHHHHTTCTTEEEECC-CCHHHHHHHHHTEEEEEE---SCHH-----HHHHHHHTTCCEEECSSSCSCHHHHH
T ss_pred -ccchhhhhhhhcccccceeecc-chHHHHHHHhhhceeEec---ccch-----hhhcchhhcCcEEEeCCCccCHHHHh
Confidence 2222222 2233 378999998 999999999999999884 2433 678999999999988 5677778777
Q ss_pred cCccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 011690 411 VDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRN 447 (479)
Q Consensus 411 ~~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~~~ 447 (479)
.+.+-++..+.+++.+++..+++ +++.++.+.+
T Consensus 308 ~g~nvlv~~d~~~I~~~i~~~l~----~~~~~~~~~~ 340 (373)
T d1v4va_ 308 AGILKLAGTDPEGVYRVVKGLLE----NPEELSRMRK 340 (373)
T ss_dssp HTSEEECCSCHHHHHHHHHHHHT----CHHHHHHHHH
T ss_pred cCeeEEcCCCHHHHHHHHHHHHc----CHHHHhhccc
Confidence 66554333779999999999998 4666665544
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.92 E-value=2.9e-07 Score=89.89 Aligned_cols=76 Identities=9% Similarity=0.001 Sum_probs=60.7
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCccEEEe--C-
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLF--S- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~G~l~--~- 419 (479)
+||.+.+ |+|. .++|..+|++|+ .. -..++.||+++|+|+|+....+ ..+.++....|... .
T Consensus 286 ~~v~~~~-~~p~---~~ll~~~~~~I~----hg---G~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~ 354 (401)
T d1rrva_ 286 DDCFAID-EVNF---QALFRRVAAVIH----HG---SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT 354 (401)
T ss_dssp TTEEEES-SCCH---HHHGGGSSEEEE----CC---CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSC
T ss_pred CCEEEEe-ccCc---HHHhhhccEEEe----cC---CchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCC
Confidence 7899999 5875 457889999995 12 2358999999999999987655 45667777789888 2
Q ss_pred -CHHHHHHHHHHHHh
Q 011690 420 -SSSELADQLLMLFK 433 (479)
Q Consensus 420 -~~~~la~~l~~l~~ 433 (479)
+++.|+++|.++++
T Consensus 355 ~~~~~L~~ai~~vl~ 369 (401)
T d1rrva_ 355 PTFESLSAALTTVLA 369 (401)
T ss_dssp CCHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHhC
Confidence 47899999999986
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.70 E-value=4.1e-07 Score=88.30 Aligned_cols=76 Identities=11% Similarity=-0.009 Sum_probs=60.0
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccccCccEEEe--C-
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLF--S- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~~~~~G~l~--~- 419 (479)
+||.+.+ |++. .++|..+|++|+ . |-..++.||+++|+|+|+....+ ..+.++....|..+ .
T Consensus 285 ~nv~~~~-~~p~---~~~l~~~~~~V~-----h--gG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~ 353 (401)
T d1iira_ 285 ADCFAIG-EVNH---QVLFGRVAAVIH-----H--GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPI 353 (401)
T ss_dssp GGEEECS-SCCH---HHHGGGSSEEEE-----C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSS
T ss_pred CCEEEEe-ccCH---HHHHhhcCEEEe-----c--CCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCC
Confidence 6899999 5764 457899999995 1 23459999999999999976444 45666777789887 2
Q ss_pred -CHHHHHHHHHHHHh
Q 011690 420 -SSSELADQLLMLFK 433 (479)
Q Consensus 420 -~~~~la~~l~~l~~ 433 (479)
++++|+++|.++++
T Consensus 354 ~~~~~l~~ai~~~l~ 368 (401)
T d1iira_ 354 PTFDSLSAALATALT 368 (401)
T ss_dssp CCHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHhC
Confidence 58999999999986
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.69 E-value=5.3e-07 Score=90.13 Aligned_cols=248 Identities=15% Similarity=0.092 Sum_probs=135.9
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCC-CchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+|+++. .....+++..++...++|++ ..|+-.-+ .+. ........| ....+.||..+|.
T Consensus 87 ~kpD~v~v~G--Dr~e~la~a~aa~~~~Ipi~-HiegG~~s-----~~~~~~~~de~~R--------~~iskls~~hf~~ 150 (377)
T d1o6ca_ 87 IKPDIVLVHG--DTTTTFAGSLAAFYHQIAVG-HVEAGLRT-----GNKYSPFPEELNR--------QMTGAIADLHFAP 150 (377)
T ss_dssp HCCSEEEEET--TCHHHHHHHHHHHHTTCEEE-EESCCCCC-----SCTTTTTTHHHHH--------HHHHHHCSEEEES
T ss_pred cccceeEeee--cccccchhhhhhhhccceEE-EEeccccc-----ccccccCchhhhc--------cccccceeEEeec
Confidence 7999999997 23444556677888899964 34432100 000 011122222 2455779999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCCCCCCCCCCChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchhcccccc
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIFTSLAGI 255 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (479)
++..++.|.+. |.+ +.++-|.-. +.+...... ......
T Consensus 151 t~~~~~~L~~~-G~~~~~I~~vG~~~~-----------D~i~~~~~~--------------------~~~~~~------- 191 (377)
T d1o6ca_ 151 TGQAKDNLLKE-NKKADSIFVTGNTAI-----------DALNTTVRD--------------------GYSHPV------- 191 (377)
T ss_dssp SHHHHHHHHHT-TCCGGGEEECCCHHH-----------HHHHHHCCS--------------------SCCCST-------
T ss_pred chhhhhhhhhh-ccccceEeeccchhH-----------HHHHHHHHH--------------------HHhhhh-------
Confidence 99999999887 765 444443200 011000000 000000
Q ss_pred ccccCCCCCeEEEEEecCCCC-CCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCCh
Q 011690 256 DVFLKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 334 (479)
Q Consensus 256 ~~~~~~~~~~~i~~~g~~~~~-K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~ 334 (479)
.......+.++++.-+-+.. +.....+.++..+... .++..+++.....
T Consensus 192 -~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~i~~~~~~-- 241 (377)
T d1o6ca_ 192 -LDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGE---------------------------FEDVQVVYPVHLN-- 241 (377)
T ss_dssp -TTTTTTSEEEEECC----------HHHHHHHHHHHHH---------------------------CTTEEEEEC------
T ss_pred -hhhccCCceEEEEeccccccccchHHHHHHHHhhccc---------------------------ccccccccccccc--
Confidence 01112233345444333221 2233444444444433 5556665544322
Q ss_pred HHHHHHHHH-cCC-CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-Cccchhcccc
Q 011690 335 ESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKV 411 (479)
Q Consensus 335 ~~l~~~~~~-~~l-~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~~~e~i~~ 411 (479)
........+ +.. ++|.+... ++..++..+++.|++++- .|++ .+.||-.+|+|+|.-. .+.-++-++.
T Consensus 242 ~~~~~~~~~~~~~~~ni~~~~~-l~~~~fl~llk~s~~vIg---nSss-----~i~Ea~~lg~P~Inir~~tERqe~~~~ 312 (377)
T d1o6ca_ 242 PVVREAAHKHFGDSDRVHLIEP-LEVIDFHNFAAKSHFILT---DSGG-----VQEEAPSLGKPVLVLRDTTERPEGVEA 312 (377)
T ss_dssp CHHHHHHHHC--CCSSEEECCC-CCHHHHHHHHHHCSEEEE---C--C-----HHHHGGGGTCCEEEECSCCC---CTTT
T ss_pred cccchhhhhccccccceEeccc-cchHHHHHHHhhhheeec---ccch-----hHHhhhhhhceEEEeCCCCcCcchhhc
Confidence 233333333 222 68999997 999999999999999884 3444 6899999999999885 3556777766
Q ss_pred CccEEEeCCHHHHHHHHHHHHhcCCCCHHHHHHH
Q 011690 412 DKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKL 445 (479)
Q Consensus 412 ~~~G~l~~~~~~la~~l~~l~~~~~~~~~~~~~~ 445 (479)
+.+-++-.+.+++.+++.++++ +....+.+
T Consensus 313 g~nilv~~~~~~I~~~i~~~l~----~~~~~~~~ 342 (377)
T d1o6ca_ 313 GTLKLAGTDEENIYQLAKQLLT----DPDEYKKM 342 (377)
T ss_dssp TSSEEECSCHHHHHHHHHHHHH----CHHHHHHH
T ss_pred CeeEECCCCHHHHHHHHHHHHh----ChHHHhhh
Confidence 6554433678999999999998 35555444
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.48 E-value=0.0003 Score=68.98 Aligned_cols=79 Identities=15% Similarity=0.104 Sum_probs=57.2
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhc-cccCccEEEeC--
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEEL-VKVDKNGLLFS-- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~-i~~~~~G~l~~-- 419 (479)
.|+.+.. |.++.++. .+..+|++|. ..| . .++.||+.+|+|+|+....+ +..- ++..+.|+-..
T Consensus 330 ~n~~v~~-~~pq~~~l-~~p~~~~fIt----HGG--~-gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~ 400 (461)
T d2acva1 330 GKGMICG-WAPQVEVL-AHKAIGGFVS----HCG--W-NSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD 400 (461)
T ss_dssp CSEEEES-SCCHHHHH-HSTTEEEEEE----CCC--H-HHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSS
T ss_pred CCeEEEe-cCCHHHHH-hcccCCEEEe----cCC--c-cHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecc
Confidence 5677766 57666544 5688899995 222 3 38999999999999986433 3333 46667888762
Q ss_pred --------CHHHHHHHHHHHHhc
Q 011690 420 --------SSSELADQLLMLFKG 434 (479)
Q Consensus 420 --------~~~~la~~l~~l~~~ 434 (479)
+++++++++.+++++
T Consensus 401 ~~~~~~~~t~~~l~~a~~~vl~~ 423 (461)
T d2acva1 401 YRKGSDVVAAEEIEKGLKDLMDK 423 (461)
T ss_dssp CCTTCCCCCHHHHHHHHHHHTCT
T ss_pred ccccCCccCHHHHHHHHHHHhhC
Confidence 578999999999974
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.40 E-value=2e-05 Score=78.36 Aligned_cols=243 Identities=16% Similarity=0.122 Sum_probs=142.7
Q ss_pred CCCcEEEEeCCCCcchHHHHHHHHHhcCCcEEEEecCchhhhhhhhcCC-CchhHHHHHHHhHHHHHHHHhhcCCEEEEe
Q 011690 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFVSIYRCFSVLRIEKYYGKMANGCLCV 178 (479)
Q Consensus 100 ~~~DvI~~~~p~~~~~~~~~~~~~~~~~~~~ii~~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 178 (479)
.+||+|+++. .-...+++..++...++|++ ..|+-.-+ .+- ........ .....+.||..+|.
T Consensus 85 ~kPD~v~v~G--Dr~e~la~a~aa~~~~ipi~-HiegG~~s-----~~~~~~~pde~~--------R~~iskls~~hf~~ 148 (376)
T d1f6da_ 85 FKPDVVLVHG--DTTTTLATSLAAFYQRIPVG-HVEAGLRT-----GDLYSPWPEEAN--------RTLTGHLAMYHFSP 148 (376)
T ss_dssp HCCSEEEEET--TCHHHHHHHHHHHTTTCCEE-EESCCCCC-----SCTTSSTTHHHH--------HHHHHHTCSEEEES
T ss_pred ccCcceeeec--cccchhhHHHHHHhhCceEE-EEeccccc-----ccccccCchhhh--------hhhhccceeEEEec
Confidence 7999999997 23444555567788899954 44442100 000 01112222 23456789999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCCCCCCCC---C---CChHHHHHHHHhhhhcccCCCCccccccccccCCcccccchh
Q 011690 179 TQAMQHELAQNWGIK---ATVLYDQPPEFFH---P---TSLEEKHELFCRLNKILHQPLGVQDCVSNAGMEGQKADETIF 249 (479)
Q Consensus 179 S~~~~~~l~~~~~~~---~~vi~n~~~~~f~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (479)
++..++.+.+. |.+ +.++-+.-.+.+. + ...........
T Consensus 149 ~~~~~~~L~~~-G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~------------------------------- 196 (376)
T d1f6da_ 149 TETSRQNLLRE-NVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAA------------------------------- 196 (376)
T ss_dssp SHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHT-------------------------------
T ss_pred cHHHHhHHHhc-CCCccccceecCchHHHHHHHHhhhhccchhhhhhhc-------------------------------
Confidence 99999999877 765 5555443111110 0 00000000000
Q ss_pred ccccccccccCCCCCeEEEEEecCC-CCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEE
Q 011690 250 TSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT 328 (479)
Q Consensus 250 ~~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~Iv 328 (479)
.......+++.++++.=+.+ ..+.+..+++++..+.+. ..++.+++.
T Consensus 197 -----~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~---------------------------~~~~~ii~p 244 (376)
T d1f6da_ 197 -----NYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYP 244 (376)
T ss_dssp -----TCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEE
T ss_pred -----cccccCCCCceEEEecccchhhhhhHHHHHHHHhhhhhh---------------------------cceeEEecc
Confidence 01122334454555433322 234556667777666554 556776665
Q ss_pred ecCCChHHHHHHHHH-cC-CCcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEec-Cccc
Q 011690 329 GKGPDKESYEEKIRR-LR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCI 405 (479)
Q Consensus 329 G~G~~~~~l~~~~~~-~~-l~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~-~~~~ 405 (479)
-... ........+ +. .+++.+... ++..++..+++.|++++- .|++ .+.||-.+|+|+|.-. ...-
T Consensus 245 ~~~~--~~~~~~~~~~~~~~~ni~~~~~-l~~~~fl~ll~~a~~vig---nSss-----gi~Ea~~lg~P~Inir~~ter 313 (376)
T d1f6da_ 245 VHLN--PNVREPVNRILGHVKNVILIDP-QEYLPFVWLMNHAWLILT---DSGG-----IQEEAPSLGKPVLVMRDTTER 313 (376)
T ss_dssp CCBC--HHHHHHHHHHHTTCTTEEEECC-CCHHHHHHHHHHCSEEEE---SSSG-----GGGTGGGGTCCEEECSSCCSC
T ss_pred cccc--hhhhhhHhhhhcccccceeecc-ccHHHHHHHHhhceEEEe---cCcc-----hHhhHHHhCCCEEEcCCCccC
Confidence 4322 222222222 23 378999998 999999999999999994 2433 4679999999999763 3445
Q ss_pred hhccccCccEEEe-CCHHHHHHHHHHHHhc
Q 011690 406 EELVKVDKNGLLF-SSSSELADQLLMLFKG 434 (479)
Q Consensus 406 ~e~i~~~~~G~l~-~~~~~la~~l~~l~~~ 434 (479)
++-++.+ +-+++ .+.+++.+++.+++++
T Consensus 314 ~~~~~~g-~~i~v~~~~~~I~~ai~~~l~~ 342 (376)
T d1f6da_ 314 PEAVTAG-TVRLVGTDKQRIVEEVTRLLKD 342 (376)
T ss_dssp HHHHHHT-SEEECCSSHHHHHHHHHHHHHC
T ss_pred ccceecC-eeEECCCCHHHHHHHHHHHHhC
Confidence 6666555 44555 6789999999999983
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.19 E-value=0.00049 Score=67.54 Aligned_cols=91 Identities=15% Similarity=0.142 Sum_probs=62.6
Q ss_pred CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhccc-cCccEEEeC--
Q 011690 347 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVK-VDKNGLLFS-- 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i~-~~~~G~l~~-- 419 (479)
.||.+.. |+|+.++.. ...++++|. ..| . .++.||+.+|+|+|+....+ +..-+. ....|...+
T Consensus 319 ~nv~~~~-~~pq~~lL~-hp~~~~fIt----HGG--~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~ 389 (450)
T d2c1xa1 319 GYGMVVP-WAPQAEVLA-HEAVGAFVT----HCG--W-NSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGG 389 (450)
T ss_dssp TTEEEES-CCCHHHHHT-STTEEEEEE----CCC--H-HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGG
T ss_pred ccccccc-cCChHhhhc-cCceeEEEc----cCC--c-cHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCC
Confidence 6788887 688876322 256777774 222 2 38999999999999997544 333453 457898883
Q ss_pred --CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 011690 420 --SSSELADQLLMLFKGFPDDSDVLKKLRNGTLE 451 (479)
Q Consensus 420 --~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~ 451 (479)
+.+++.++|.+++++ + .++..++++.+
T Consensus 390 ~~t~~~l~~ai~~vL~d----~-~y~~~~~r~~~ 418 (450)
T d2c1xa1 390 VFTKSGLMSCFDQILSQ----E-KGKKLRENLRA 418 (450)
T ss_dssp SCCHHHHHHHHHHHHHS----H-HHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHhcC----c-HHHHHHHHHHH
Confidence 589999999999994 3 33444444544
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.69 E-value=0.027 Score=54.43 Aligned_cols=77 Identities=16% Similarity=0.161 Sum_probs=56.2
Q ss_pred CcEEEecCCCCcchHHHHH--HcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEe-
Q 011690 347 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLF- 418 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l--~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~- 418 (479)
+||.+.+ |+|+.+ +| .+++++|. .| |. .++.||+.+|+|+|+....+ ....+ +.-..|+..
T Consensus 334 ~nv~~~~-w~Pq~~---lL~hp~~~~fVt-----HG-G~-gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~ 402 (471)
T d2vcha1 334 RGFVIPF-WAPQAQ---VLAHPSTGGFLT-----HC-GW-NSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPR 402 (471)
T ss_dssp TEEEEES-CCCHHH---HHHSTTEEEEEE-----CC-CH-HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCC
T ss_pred CCeeecc-cCCHHH---HhcCccCCEEEe-----cC-Cc-cHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEe
Confidence 6899888 799987 55 46777774 22 23 38999999999999997433 33333 444677765
Q ss_pred --C----CHHHHHHHHHHHHhc
Q 011690 419 --S----SSSELADQLLMLFKG 434 (479)
Q Consensus 419 --~----~~~~la~~l~~l~~~ 434 (479)
. +.++|+++|.+++++
T Consensus 403 ~~~~~~~t~~~l~~ai~~vl~~ 424 (471)
T d2vcha1 403 AGDDGLVRREEVARVVKGLMEG 424 (471)
T ss_dssp CCTTSCCCHHHHHHHHHHHHTS
T ss_pred cCCCCcCCHHHHHHHHHHHhCC
Confidence 2 578999999999984
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.22 E-value=0.00062 Score=65.05 Aligned_cols=107 Identities=16% Similarity=0.133 Sum_probs=71.7
Q ss_pred cCCCCCeEEEEEe-cCCCCCC--HHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecCCChH
Q 011690 259 LKPNRPALVVSST-SWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 335 (479)
Q Consensus 259 ~~~~~~~~i~~~g-~~~~~K~--~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G~~~~ 335 (479)
...+++.+++..| +..+.|. .+..++.+..+.++ +..++++|...+.+
T Consensus 176 ~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~-----------------------------~~~ivl~g~~~e~~ 226 (348)
T d1pswa_ 176 LSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-----------------------------GYQVVLFGSAKDHE 226 (348)
T ss_dssp CCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-----------------------------TCEEEECCCGGGHH
T ss_pred cccCCCeEEeccccchhhccccchHHHhhhHHHHhhc-----------------------------CCccccccccchHH
Confidence 4455665666665 5555454 45577777776543 45778888555555
Q ss_pred HHHHHHHHcCC---Cc-EEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc
Q 011690 336 SYEEKIRRLRL---KR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 403 (479)
Q Consensus 336 ~l~~~~~~~~l---~~-V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~ 403 (479)
..++..+.... .. +.+.|. .+-.++..+++.||++|.+ .+| .+==|.++|+|+|+--.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l~g~-~sl~el~~li~~a~l~I~~---Dtg-----~~HlAaa~g~p~i~lfg~ 289 (348)
T d1pswa_ 227 AGNEILAALNTEQQAWCRNLAGE-TQLDQAVILIAACKAIVTN---DSG-----LMHVAAALNRPLVALYGP 289 (348)
T ss_dssp HHHHHHTTSCHHHHTTEEECTTT-SCHHHHHHHHHTSSEEEEE---SSH-----HHHHHHHTTCCEEEEESS
T ss_pred HHHHHHHhhhcccccccccccCC-ccHHHHHHHHhcceeEeec---Ccc-----HHHHHHHcCCCEEEEECC
Confidence 44444333221 23 667787 8899999999999999987 455 567799999999988533
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=96.91 E-value=0.0056 Score=59.54 Aligned_cols=112 Identities=16% Similarity=0.240 Sum_probs=75.3
Q ss_pred CcEEEecCCCCcchHHHHH--HcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCcc----chhcc-ccCccEEEeC
Q 011690 347 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS 419 (479)
Q Consensus 347 ~~V~f~G~~~~~~~~~~~l--~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~~----~~e~i-~~~~~G~l~~ 419 (479)
.||.+.. |+|+.+ +| ..++++|. ..| . .++.||+.+|+|+|+....+ ...-+ +....|...+
T Consensus 346 ~Nv~~~~-~~Pq~~---lL~hp~~~~fIt----HGG--~-~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~ 414 (473)
T d2pq6a1 346 DRGLIAS-WCPQDK---VLNHPSIGGFLT----HCG--W-NSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID 414 (473)
T ss_dssp TTEEEES-CCCHHH---HHTSTTEEEEEE----CCC--H-HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred CceEEee-eCCHHH---HhcCCcCcEEEe----cCC--c-cHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC
Confidence 6898888 698777 56 56677774 222 2 38999999999999997433 33334 4447788884
Q ss_pred ---CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhhhhch--H---HHHHHHHHHHHHHHHh
Q 011690 420 ---SSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARW--A---TEWEEHAKPLITEVIS 475 (479)
Q Consensus 420 ---~~~~la~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w--~---~~~~~~~~~~~~~~~~ 475 (479)
+.++|+++|.+++.+ +. .++++++|.+.....+= + ..+ ..++.++++|+.
T Consensus 415 ~~~t~~~l~~ai~~vl~d----~~-~~~~r~~a~~l~~~~~~a~~~gg~s~-~~~~~~i~~~~~ 472 (473)
T d2pq6a1 415 TNVKREELAKLINEVIAG----DK-GKKMKQKAMELKKKAEENTRPGGCSY-MNLNKVIKDVLL 472 (473)
T ss_dssp SSCCHHHHHHHHHHHHTS----HH-HHHHHHHHHHHHHHHHHHTSTTCHHH-HHHHHHHHHTTC
T ss_pred CCcCHHHHHHHHHHHHcC----Ch-HHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHhc
Confidence 589999999999994 43 34567777765422211 0 122 346778877764
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=94.51 E-value=0.7 Score=48.95 Aligned_cols=138 Identities=15% Similarity=0.134 Sum_probs=93.3
Q ss_pred cCCCCCeEEEEEecCCCCCCHHHHHH-HHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-CChHH
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGILLE-AALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKES 336 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~lie-A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G-~~~~~ 336 (479)
+.++. +.++++-|++..|-....+. .+..+. ++.+ ........+.+++.|+- |.-..
T Consensus 546 ldp~~-lfd~~arRfheYKRq~Ln~~~i~~ly~-rlk~-------------------~~~~~~~P~q~IFaGKAhP~d~~ 604 (824)
T d2gj4a1 546 INPNS-LFDVQVKRIHEYKRQLLNCLHVITLYN-RIKK-------------------EPNKFVVPRTVMIGGKAAPGYHM 604 (824)
T ss_dssp CCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHH-HHHH-------------------CTTSCCCCEEEEEECCCCTTCHH
T ss_pred CCcch-hhhhheeechhhhhhhhhHhhHHHHHH-Hhhh-------------------cccCCCCCeEEEEeCCCCCccHH
Confidence 44544 68999999999999877443 322222 2111 11112334999999975 33333
Q ss_pred HHHHHH---Hc----C----C---CcEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecC
Q 011690 337 YEEKIR---RL----R----L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 402 (479)
Q Consensus 337 l~~~~~---~~----~----l---~~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~ 402 (479)
-++.|+ +. + + -+|.|+-. ....-...++.+||+-+-.++. .-|.-|+.=.=+|..|.+-++|--
T Consensus 605 gK~iIk~I~~va~~in~dp~~~~~lkVvFlen-Y~v~lA~~li~g~Dvwln~p~~-~~EASGTSgMK~alNGal~lstlD 682 (824)
T d2gj4a1 605 AKMIIKLITAIGDVVNHDPVVGDRLRVIFLEN-YRVSLAEKVIPAADLSEQISTA-GTEASGTGNMKFMLNGALTIGTMD 682 (824)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTGGGEEEEEETT-CCHHHHHHHGGGCSEEEECCCT-TSCSCCSHHHHHHHTTCEEEECSC
T ss_pred HHHHHHHHHHHHHHHhcChhhccceeEEEcCC-CchHHHHHhhhhhhhhhcCCCC-CcccCCcchhHHHHcCCeeecccc
Confidence 333333 11 1 2 16899987 7888899999999999976443 345566666777999999999999
Q ss_pred ccchhcccc--CccEEEeC
Q 011690 403 SCIEELVKV--DKNGLLFS 419 (479)
Q Consensus 403 ~~~~e~i~~--~~~G~l~~ 419 (479)
|...|+.+. +++|++++
T Consensus 683 GwnvEi~~~vg~~N~~~fG 701 (824)
T d2gj4a1 683 GANVEMAEEAGEENFFIFG 701 (824)
T ss_dssp TTHHHHHHHHCGGGSEECS
T ss_pred chHHHHHHhcCcccEEEeC
Confidence 998898875 78899994
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=94.25 E-value=0.17 Score=53.66 Aligned_cols=139 Identities=14% Similarity=0.116 Sum_probs=95.7
Q ss_pred cCCCCCeEEEEEecCCCCCCHHHHHHHHHHhHHHHhhhhccCCCchhhhhHhhhccCcccCCCCEEEEEEecC-CChHHH
Q 011690 259 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESY 337 (479)
Q Consensus 259 ~~~~~~~~i~~~g~~~~~K~~~~lieA~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~IvG~G-~~~~~l 337 (479)
+.++. +.++++-|+...|-...++.-...+.++ |.+........+.|+++|+- |.-..-
T Consensus 522 ldp~~-LtigfaRRfa~YKR~~L~~~~i~~l~~~-------------------l~~~~~~~~~Pvq~IfaGKAhP~d~~g 581 (796)
T d1l5wa_ 522 INPQA-IFDIQIKRLHEYKRQHLNLLHILALYKE-------------------IRENPQADRVPRVFLFGAKAAPGYYLA 581 (796)
T ss_dssp CCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHHH-------------------HHTCTTCCCCCEEEEEECCCCTTCHHH
T ss_pred cChhh-ccchhhhhhhhhhcccchhhhHHHHHHH-------------------HhcCcccCCCceEEEEcCCCCCchHHH
Confidence 44444 6899999999999988855544443332 11111111224899999975 332222
Q ss_pred HHHH---HHc--------CCC---cEEEecCCCCcchHHHHHHcCCEEEEcccCCCCCCCcHHHHHHHhCCCcEEEecCc
Q 011690 338 EEKI---RRL--------RLK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 403 (479)
Q Consensus 338 ~~~~---~~~--------~l~---~V~f~G~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~llEama~G~PVIas~~~ 403 (479)
++.+ .+. .+. +|.|+-. ...+-...++..||+-+..++. .-|.-|+.=.=||..|.+.+++--|
T Consensus 582 K~iIk~I~~va~~in~dp~~~~~~kVVFlen-Ydv~lA~~lv~g~DVwln~p~~-p~EASGTSgMKaalNG~lnlstlDG 659 (796)
T d1l5wa_ 582 KNIIFAINKVADVINNDPLVGDKLKVVFLPD-YCVSAAEKLIPAADISEQISTA-GKEASGTGNMKLALNGALTVGTLDG 659 (796)
T ss_dssp HHHHHHHHHHHHHHHTCTTTGGGEEEEECSS-CCHHHHHHHGGGCSEEEECCCT-TTCCCCSHHHHHHHTTCEEEECSCT
T ss_pred HHHHHHHHHHHHHhcCChhhccceeEEEeCC-CchHHHHHHhcccchhhhCCCC-CcccCCchHHHHHHcCCeeeecccc
Confidence 2222 211 121 6999987 7888889999999999975433 4456677788899999999999999
Q ss_pred cchhcccc--CccEEEeC
Q 011690 404 CIEELVKV--DKNGLLFS 419 (479)
Q Consensus 404 ~~~e~i~~--~~~G~l~~ 419 (479)
...|+.+. ++|||+++
T Consensus 660 w~vE~~~~vg~eN~f~fG 677 (796)
T d1l5wa_ 660 ANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp THHHHHHHHCGGGSEECS
T ss_pred hHHHHHHhcCccceEEec
Confidence 98898875 88999994
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=84.14 E-value=7.4 Score=32.06 Aligned_cols=108 Identities=10% Similarity=0.039 Sum_probs=67.3
Q ss_pred CCCEEEEEEecCCChHHHHHHHHHcCCCcEEEecC---------------CCCcchHHHHHHcCCEEEEcccCCCCCCCc
Q 011690 320 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTM---------------WLSAEDYPLLLGSADLGVCLHTSSSGLDLP 384 (479)
Q Consensus 320 ~p~~~l~IvG~G~~~~~l~~~~~~~~l~~V~f~G~---------------~~~~~~~~~~l~~adi~v~p~~~s~~e~~p 384 (479)
..+-++.|+|-|.....+-+.....|.+++.+..+ +++-+++.+.+..+|+.+.. +++...-+.
T Consensus 22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~Divi~a-tss~~~ii~ 100 (159)
T d1gpja2 22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSA-TAAPHPVIH 100 (159)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEEC-CSSSSCCBC
T ss_pred cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccCCEEEEe-cCCCCcccc
Confidence 34678999999977666656556667667776654 25567889999999999985 332222244
Q ss_pred HHHHHHHh----CCCcEEEecCccchh---ccccCccEEEeCCHHHHHHHHH
Q 011690 385 MKVVDMFG----CGLPVCAVSYSCIEE---LVKVDKNGLLFSSSSELADQLL 429 (479)
Q Consensus 385 ~~llEama----~G~PVIas~~~~~~e---~i~~~~~G~l~~~~~~la~~l~ 429 (479)
-..++... .+.|.+.-|.+-.++ -+.. ..|...-|.++|.+...
T Consensus 101 ~~~i~~~~~~r~~~~~~~iiDlavPr~vd~~v~~-~~~v~l~~ld~l~~~~~ 151 (159)
T d1gpja2 101 VDDVREALRKRDRRSPILIIDIANPRDVEEGVEN-IEDVEVRTIDDLRVIAR 151 (159)
T ss_dssp HHHHHHHHHHCSSCCCEEEEECCSSCSBCTTGGG-STTEEEEEHHHHHHHHH
T ss_pred HhhhHHHHHhcccCCCeEEEeecCCCCcChhhhc-cCCeEEEeHHHHHHHHH
Confidence 45554443 578999998754332 2222 23455555666555443
|