Citrus Sinensis ID: 011768

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------48
MEKKSQHQSSSLIRKTDGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGSRLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEADNESDGELTMWDMEQRILCA
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccEEEEEEEEcccccccEEEcccccEEEEEEEccEEEEEEccEEEEcccEEEEEccEEEEEEEccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEEcccEEEEEEcccccEEEEEccccccEEEcccccccccccccccccccccEEEEcccccccEEEEEEEEccccccccccccccccccccccccEEEEEEccccccccccccccEEEccccccccccHHHHHHHHHcccccccEEEcccEEEEEEccccccccHHHHHccccccHHHHcHHHHHcccccccccccccccccccccccccccc
cccccccccccHccccccccHHHccccccccccccccccccccccccccccccccccEHHHcccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEHccEEEEcccccHHHcccEEEEEEEEcccccccEEEcccccEEEEcccccEEEEEEcEEEEEcccEEEEEcccEEEEEEcccccccEEEEEccccccccccccccccccccccccccccEEEEEccccccEEEEEEEccEEEEEEcccccccEEEEcccccccEEcHHHcccccEEEEccccccEEEEEEccccccccEEEEEEEccccEEEEcccccccHHHHHHHHHHHHHHHccccccccccccccccHccccccccccHHHHHHHHHcHHcccccHHcccEEEEEcccccccccHHHHHcHHHcHHHHHHHHHHHHHccccccccccccccccccHHHHHHcc
mekksqhqssslirktdgedfsdlnyesgfgnsfsseaidgalprgqnsplvcpfglyaeqisgtsftsprklnqrswlyrikpsathepfkprvpahgklvsefdksnsyttptqlrwkpvdipdsptdfidGLYTIcgagssflRHGYAIHMYTanksmdncafcnadgdflvvpqkgrlwiatecgklevspgeiavlpqgfrfavslpdgpsrgyIAEIFgthfqlpdlgpiganglaaprdflvptawfeegsrlGYTIVQKFGGelftarqdfspfnvvawhgnyvpykydlskfcpfntvlvdhgdpsintvltaptdkpgvalldfvifpprwlvaehtfrppyyhrncmsefmglirggyeakadgflpggaslhscmtphgpdtktyEATIargseagpykitDTMAFMFEsclipricpwalespfmdhdyyrcwiglrshfsyeeadnesdgelTMWDMEQRILCA
mekksqhqssslirktdgedfsdLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQIsgtsftsprklnqrSWLYRIKPsathepfkprvpAHGKlvsefdksnsyttptqlrwkpvdiPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGSRLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEAdnesdgeltmWDMEQRILCA
MEKKSQHQSSSLIRKTDGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGSRLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEADNESDGELTMWDMEQRILCA
*************************************************PLVCPFGLYAEQISGTSFTS*RKLNQRSWLYRIK*******************************TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGSRLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMT*******TYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYE**********************
************************NYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGSRLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEAT******AGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS***********LTMWDMEQRILCA
*************RKTDGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGSRLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEADNESDGELTMWDMEQRILCA
***************************SGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGSRLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSY**********LTMWDMEQRILCA
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MEKKSQHQSSSLIRKTDGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGSRLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEADNESDGELTMWDMEQRILCA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query478 2.2.26 [Sep-21-2011]
Q9ZRA2461 Homogentisate 1,2-dioxyge yes no 0.910 0.943 0.834 0.0
Q5VRH4470 Homogentisate 1,2-dioxyge yes no 0.916 0.931 0.778 0.0
Q54QI4432 Homogentisate 1,2-dioxyge yes no 0.880 0.974 0.613 1e-149
O09173445 Homogentisate 1,2-dioxyge yes no 0.891 0.957 0.566 1e-140
Q93099445 Homogentisate 1,2-dioxyge yes no 0.893 0.959 0.567 1e-140
A0K4Z6444 Homogentisate 1,2-dioxyge yes no 0.897 0.966 0.557 1e-138
Q1BYQ6444 Homogentisate 1,2-dioxyge yes no 0.897 0.966 0.557 1e-138
Q39J54444 Homogentisate 1,2-dioxyge yes no 0.905 0.975 0.545 1e-138
B1YTZ1444 Homogentisate 1,2-dioxyge yes no 0.897 0.966 0.557 1e-138
Q5RF05445 Homogentisate 1,2-dioxyge yes no 0.893 0.959 0.563 1e-138
>sp|Q9ZRA2|HGD_ARATH Homogentisate 1,2-dioxygenase OS=Arabidopsis thaliana GN=HGO PE=2 SV=2 Back     alignment and function desciption
 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/435 (83%), Positives = 390/435 (89%)

Query: 26  YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 85
           Y+SGFGN FSSEAI GALP  QNSPL+CP+GLYAEQISGTSFTSPRKLNQRSWLYR+KPS
Sbjct: 13  YQSGFGNHFSSEAIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQRSWLYRVKPS 72

Query: 86  ATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSF 145
            THEPFKPRVPAH KLVSEFD SNS T PTQLRW+P DIPDS  DF+DGL+TICGAGSSF
Sbjct: 73  VTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIPDSEIDFVDGLFTICGAGSSF 132

Query: 146 LRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGF 205
           LRHG+AIHMY AN  M + AFCNADGDFL+VPQ GRLWI TECG+L V+PGEIAV+PQGF
Sbjct: 133 LRHGFAIHMYVANTGMKDSAFCNADGDFLLVPQTGRLWIETECGRLLVTPGEIAVIPQGF 192

Query: 206 RFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGSRLGYTIV 265
           RF++ LPDG SRGY+AEI+G HFQLPDLGPIGANGLAA RDFL PTAWFE+G R  YTIV
Sbjct: 193 RFSIDLPDGKSRGYVAEIYGAHFQLPDLGPIGANGLAASRDFLAPTAWFEDGLRPEYTIV 252

Query: 266 QKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTD 325
           QKFGGELFTA+QDFSPFNVVAWHGNYVPYKYDL KFCP+NTVL+DHGDPSINTVLTAPTD
Sbjct: 253 QKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLLDHGDPSINTVLTAPTD 312

Query: 326 KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHS 385
           KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLI G YEAKADGFLPGGASLHS
Sbjct: 313 KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGAYEAKADGFLPGGASLHS 372

Query: 386 CMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRC 445
           CMTPHGPDT TYEATIAR +   P K+T TMAFMFES LIPR+C WALESPF+DHDYY+C
Sbjct: 373 CMTPHGPDTTTYEATIARVNAMAPSKLTGTMAFMFESALIPRVCHWALESPFLDHDYYQC 432

Query: 446 WIGLRSHFSYEEADN 460
           WIGL+SHFS    D 
Sbjct: 433 WIGLKSHFSRISLDK 447

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 5
>sp|Q5VRH4|HGD_ORYSJ Homogentisate 1,2-dioxygenase OS=Oryza sativa subsp. japonica GN=HGO PE=2 SV=1 Back     alignment and function description
>sp|Q54QI4|HGD_DICDI Homogentisate 1,2-dioxygenase OS=Dictyostelium discoideum GN=hgd PE=2 SV=1 Back     alignment and function description
>sp|O09173|HGD_MOUSE Homogentisate 1,2-dioxygenase OS=Mus musculus GN=Hgd PE=1 SV=2 Back     alignment and function description
>sp|Q93099|HGD_HUMAN Homogentisate 1,2-dioxygenase OS=Homo sapiens GN=HGD PE=1 SV=2 Back     alignment and function description
>sp|A0K4Z6|HGD_BURCH Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain HI2424) GN=hmgA PE=3 SV=1 Back     alignment and function description
>sp|Q1BYQ6|HGD_BURCA Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain AU 1054) GN=hmgA PE=3 SV=1 Back     alignment and function description
>sp|Q39J54|HGD_BURS3 Homogentisate 1,2-dioxygenase OS=Burkholderia sp. (strain 383) GN=hmgA PE=3 SV=1 Back     alignment and function description
>sp|B1YTZ1|HGD_BURA4 Homogentisate 1,2-dioxygenase OS=Burkholderia ambifaria (strain MC40-6) GN=hmgA PE=3 SV=1 Back     alignment and function description
>sp|Q5RF05|HGD_PONAB Homogentisate 1,2-dioxygenase OS=Pongo abelii GN=HGD PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query478
225461591463 PREDICTED: homogentisate 1,2-dioxygenase 0.945 0.976 0.856 0.0
255554698457 homogentisate 1,2-dioxygenase, putative 0.939 0.982 0.856 0.0
8131905477 homogentisate 1,2-dioxygenase [Solanum l 0.905 0.907 0.868 0.0
449438877471 PREDICTED: homogentisate 1,2-dioxygenase 0.962 0.976 0.809 0.0
297792833461 homogentisate 1,2-dioxygenase [Arabidops 0.897 0.930 0.857 0.0
224056539464 predicted protein [Populus trichocarpa] 0.956 0.984 0.813 0.0
21594040461 homogentisate 1,2-dioxygenase [Arabidops 0.910 0.943 0.845 0.0
15239545461 homogentisate 1,2-dioxygenase [Arabidops 0.910 0.943 0.834 0.0
356543235455 PREDICTED: homogentisate 1,2-dioxygenase 0.926 0.973 0.821 0.0
4098647461 homogentisate 1,2-dioxygenase [Arabidops 0.910 0.943 0.832 0.0
>gi|225461591|ref|XP_002285298.1| PREDICTED: homogentisate 1,2-dioxygenase [Vitis vinifera] gi|302142933|emb|CBI20228.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  822 bits (2124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/452 (85%), Positives = 414/452 (91%)

Query: 11  SLIRKTDGEDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSP 70
           S+ +  D +  SDL Y+ GFGN  SSEAI GALPRGQN+PL CPFGLYAEQISGT FT+P
Sbjct: 5   SVSKTNDSDPPSDLQYQFGFGNHLSSEAIAGALPRGQNNPLTCPFGLYAEQISGTPFTAP 64

Query: 71  RKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTD 130
           RK NQ SWLYRIKPS THEPFKPRVP+HGKLVSEF++SNS T PTQLRWKPV+IPDSPTD
Sbjct: 65  RKQNQFSWLYRIKPSVTHEPFKPRVPSHGKLVSEFNQSNSSTNPTQLRWKPVEIPDSPTD 124

Query: 131 FIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGK 190
           FIDGLYT+CGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFL+VPQKGRL I TECGK
Sbjct: 125 FIDGLYTVCGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLIVPQKGRLSITTECGK 184

Query: 191 LEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVP 250
           L+VSPGEI VLP GFRF V LPDGPSRGY+AEIFG HFQLPDLGPIGANGLAA RDFLVP
Sbjct: 185 LQVSPGEIVVLPHGFRFVVDLPDGPSRGYVAEIFGAHFQLPDLGPIGANGLAASRDFLVP 244

Query: 251 TAWFEEGSRLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVD 310
            AW+EE SR GYTIVQKFGGELFTA+QDFSPFNVVAWHGNYVPYKYDLSKFCP NTVL D
Sbjct: 245 VAWYEECSRPGYTIVQKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLSKFCPVNTVLKD 304

Query: 311 HGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYE 370
           H DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLI GGYE
Sbjct: 305 HADPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGGYE 364

Query: 371 AKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICP 430
           AKADGFLPGGASLHSCMTPHGPDTKT+EAT+A G +AGP++IT+TMAFMFESCLIPRICP
Sbjct: 365 AKADGFLPGGASLHSCMTPHGPDTKTFEATVAHGKDAGPFRITNTMAFMFESCLIPRICP 424

Query: 431 WALESPFMDHDYYRCWIGLRSHFSYEEADNES 462
           WAL+SP +DHDYY+CW+GLRSHFS EEA +ES
Sbjct: 425 WALDSPSIDHDYYQCWVGLRSHFSREEASDES 456

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255554698|ref|XP_002518387.1| homogentisate 1,2-dioxygenase, putative [Ricinus communis] gi|223542482|gb|EEF44023.1| homogentisate 1,2-dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|8131905|gb|AAF73132.1|AF149017_1 homogentisate 1,2-dioxygenase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|449438877|ref|XP_004137214.1| PREDICTED: homogentisate 1,2-dioxygenase-like [Cucumis sativus] gi|449524824|ref|XP_004169421.1| PREDICTED: homogentisate 1,2-dioxygenase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297792833|ref|XP_002864301.1| homogentisate 1,2-dioxygenase [Arabidopsis lyrata subsp. lyrata] gi|297310136|gb|EFH40560.1| homogentisate 1,2-dioxygenase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224056539|ref|XP_002298900.1| predicted protein [Populus trichocarpa] gi|222846158|gb|EEE83705.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|21594040|gb|AAM65958.1| homogentisate 1,2-dioxygenase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15239545|ref|NP_200219.1| homogentisate 1,2-dioxygenase [Arabidopsis thaliana] gi|30696407|ref|NP_851187.1| homogentisate 1,2-dioxygenase [Arabidopsis thaliana] gi|13432134|sp|Q9ZRA2.2|HGD_ARATH RecName: Full=Homogentisate 1,2-dioxygenase; AltName: Full=Homogentisate oxygenase; AltName: Full=Homogentisic acid oxidase; AltName: Full=Homogentisicase gi|7108615|gb|AAF36499.1|AF130845_1 homogentisate 1,2-dioxygenase [Arabidopsis thaliana] gi|8809579|dbj|BAA97130.1| homogentisate 1,2-dioxygenase [Arabidopsis thaliana] gi|22655252|gb|AAM98216.1| homogentisate 1,2-dioxygenase [Arabidopsis thaliana] gi|33942055|gb|AAQ55280.1| At5g54080 [Arabidopsis thaliana] gi|332009064|gb|AED96447.1| homogentisate 1,2-dioxygenase [Arabidopsis thaliana] gi|332009065|gb|AED96448.1| homogentisate 1,2-dioxygenase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356543235|ref|XP_003540068.1| PREDICTED: homogentisate 1,2-dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|4098647|gb|AAD00360.1| homogentisate 1,2-dioxygenase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query478
TAIR|locus:2166567461 HGO "AT5G54080" [Arabidopsis t 0.912 0.945 0.832 3.5e-210
DICTYBASE|DDB_G0283765432 hgd "homogentisic acid oxidase 0.880 0.974 0.613 7e-141
ZFIN|ZDB-GENE-020802-5443 hgd "homogentisate 1,2-dioxyge 0.887 0.957 0.587 1.7e-137
MGI|MGI:96078445 Hgd "homogentisate 1, 2-dioxyg 0.889 0.955 0.567 2.9e-135
UNIPROTKB|Q93099445 HGD "Homogentisate 1,2-dioxyge 0.891 0.957 0.569 5.4e-134
UNIPROTKB|E1C3Y2434 HGD "Uncharacterized protein" 0.876 0.965 0.581 1.8e-133
UNIPROTKB|I3LTZ3445 HGD "Uncharacterized protein" 0.891 0.957 0.566 4.8e-133
UNIPROTKB|G3V6C2445 Hgd "RCG52860, isoform CRA_b" 0.891 0.957 0.555 1.6e-132
UNIPROTKB|F1Q313445 HGD "Uncharacterized protein" 0.891 0.957 0.562 2.1e-132
RGD|1308757445 Hgd "homogentisate 1, 2-dioxyg 0.891 0.957 0.553 5.6e-132
TAIR|locus:2166567 HGO "AT5G54080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2032 (720.4 bits), Expect = 3.5e-210, P = 3.5e-210
 Identities = 363/436 (83%), Positives = 393/436 (90%)

Query:    19 EDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSW 78
             ++  +L Y+SGFGN FSSEAI GALP  QNSPL+CP+GLYAEQISGTSFTSPRKLNQRSW
Sbjct:     6 KELEELKYQSGFGNHFSSEAIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQRSW 65

Query:    79 LYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTI 138
             LYR+KPS THEPFKPRVPAH KLVSEFD SNS T PTQLRW+P DIPDS  DF+DGL+TI
Sbjct:    66 LYRVKPSVTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIPDSEIDFVDGLFTI 125

Query:   139 CGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEI 198
             CGAGSSFLRHG+AIHMY AN  M + AFCNADGDFL+VPQ GRLWI TECG+L V+PGEI
Sbjct:   126 CGAGSSFLRHGFAIHMYVANTGMKDSAFCNADGDFLLVPQTGRLWIETECGRLLVTPGEI 185

Query:   199 AVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGS 258
             AV+PQGFRF++ LPDG SRGY+AEI+G HFQLPDLGPIGANGLAA RDFL PTAWFE+G 
Sbjct:   186 AVIPQGFRFSIDLPDGKSRGYVAEIYGAHFQLPDLGPIGANGLAASRDFLAPTAWFEDGL 245

Query:   259 RLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINT 318
             R  YTIVQKFGGELFTA+QDFSPFNVVAWHGNYVPYKYDL KFCP+NTVL+DHGDPSINT
Sbjct:   246 RPEYTIVQKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLLDHGDPSINT 305

Query:   319 VLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLP 378
             VLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLI G YEAKADGFLP
Sbjct:   306 VLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGAYEAKADGFLP 365

Query:   379 GGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFM 438
             GGASLHSCMTPHGPDT TYEATIAR +   P K+T TMAFMFES LIPR+C WALESPF+
Sbjct:   366 GGASLHSCMTPHGPDTTTYEATIARVNAMAPSKLTGTMAFMFESALIPRVCHWALESPFL 425

Query:   439 DHDYYRCWIGLRSHFS 454
             DHDYY+CWIGL+SHFS
Sbjct:   426 DHDYYQCWIGLKSHFS 441
GO:0004411 "homogentisate 1,2-dioxygenase activity" evidence=ISS;IDA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006559 "L-phenylalanine catabolic process" evidence=ISS
GO:0006572 "tyrosine catabolic process" evidence=ISS
GO:0005829 "cytosol" evidence=IDA
GO:0006635 "fatty acid beta-oxidation" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
GO:0015996 "chlorophyll catabolic process" evidence=RCA
GO:0016558 "protein import into peroxisome matrix" evidence=RCA
GO:1902000 "homogentisate catabolic process" evidence=IDA
DICTYBASE|DDB_G0283765 hgd "homogentisic acid oxidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-020802-5 hgd "homogentisate 1,2-dioxygenase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:96078 Hgd "homogentisate 1, 2-dioxygenase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q93099 HGD "Homogentisate 1,2-dioxygenase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1C3Y2 HGD "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|I3LTZ3 HGD "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|G3V6C2 Hgd "RCG52860, isoform CRA_b" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q313 HGD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1308757 Hgd "homogentisate 1, 2-dioxygenase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93099HGD_HUMAN1, ., 1, 3, ., 1, 1, ., 50.56780.89330.9595yesno
Q5VRH4HGD_ORYSJ1, ., 1, 3, ., 1, 1, ., 50.77820.91630.9319yesno
Q5GVE9HGD_XANOR1, ., 1, 3, ., 1, 1, ., 50.52050.90370.9795yesno
B7VA96HGD_PSEA81, ., 1, 3, ., 1, 1, ., 50.55170.88910.9837yesno
A9I714HGD_BORPD1, ., 1, 3, ., 1, 1, ., 50.54500.88280.9768yesno
B0T816HGD_CAUSK1, ., 1, 3, ., 1, 1, ., 50.54980.87020.9742yesno
Q54QI4HGD_DICDI1, ., 1, 3, ., 1, 1, ., 50.61340.88070.9745yesno
Q2NYM7HGD_XANOM1, ., 1, 3, ., 1, 1, ., 50.52280.90370.9795yesno
Q63RD3HGD_BURPS1, ., 1, 3, ., 1, 1, ., 50.54170.91000.9666yesno
B1YTZ1HGD_BURA41, ., 1, 3, ., 1, 1, ., 50.55760.89740.9662yesno
Q1D8L9HGD_MYXXD1, ., 1, 3, ., 1, 1, ., 50.57270.87440.9565yesno
A4JBW6HGD_BURVG1, ., 1, 3, ., 1, 1, ., 50.54830.89740.9662yesno
Q7WNZ3HGD_BORBR1, ., 1, 3, ., 1, 1, ., 50.53890.89740.9930yesno
A3NYN0HGD_BURP01, ., 1, 3, ., 1, 1, ., 50.54170.91000.9666yesno
A0K4Z6HGD_BURCH1, ., 1, 3, ., 1, 1, ., 50.55760.89740.9662yesno
Q9ZRA2HGD_ARATH1, ., 1, 3, ., 1, 1, ., 50.83440.91000.9436yesno
A3MMH2HGD_BURM71, ., 1, 3, ., 1, 1, ., 50.54170.91000.9666yesno
Q62I34HGD_BURMA1, ., 1, 3, ., 1, 1, ., 50.54170.91000.9666yesno
Q4UZI9HGD_XANC81, ., 1, 3, ., 1, 1, ., 50.52820.89330.9384yesno
Q46UA4HGD_CUPPJ1, ., 1, 3, ., 1, 1, ., 50.53560.89330.9726yesno
A6V6F5HGD_PSEA71, ., 1, 3, ., 1, 1, ., 50.54940.88910.9837yesno
Q3JPA3HGD_BURP11, ., 1, 3, ., 1, 1, ., 50.54170.91000.9666yesno
Q0K0L8HGD_CUPNH1, ., 1, 3, ., 1, 1, ., 50.53440.89530.9749yesno
Q1BYQ6HGD_BURCA1, ., 1, 3, ., 1, 1, ., 50.55760.89740.9662yesno
B8H072HGD_CAUCN1, ., 1, 3, ., 1, 1, ., 50.55500.87440.9835yesno
Q87Z79HGD_PSESM1, ., 1, 3, ., 1, 1, ., 50.53420.89530.9861yesno
A2S9M1HGD_BURM91, ., 1, 3, ., 1, 1, ., 50.54170.91000.9666yesno
Q7W189HGD_BORPA1, ., 1, 3, ., 1, 1, ., 50.53890.89740.9930yesno
Q2SYQ6HGD_BURTA1, ., 1, 3, ., 1, 1, ., 50.54170.91000.9666yesno
B2SM18HGD_XANOP1, ., 1, 3, ., 1, 1, ., 50.52280.90370.9795yesno
Q9A5B8HGD_CAUCR1, ., 1, 3, ., 1, 1, ., 50.55500.87440.9835yesno
B4ECX5HGD_BURCJ1, ., 1, 3, ., 1, 1, ., 50.55400.89530.9639yesno
Q02LF6HGD_PSEAB1, ., 1, 3, ., 1, 1, ., 50.54940.88910.9837yesno
Q5RF05HGD_PONAB1, ., 1, 3, ., 1, 1, ., 50.56330.89330.9595yesno
B2UJ73HGD_RALPJ1, ., 1, 3, ., 1, 1, ., 50.55140.88280.9419yesno
Q8XRZ0HGD_RALSO1, ., 1, 3, ., 1, 1, ., 50.55240.88070.9397yesno
Q9Y041HGD_CAEEL1, ., 1, 3, ., 1, 1, ., 50.56030.89530.9794yesno
A1V1U3HGD_BURMS1, ., 1, 3, ., 1, 1, ., 50.54170.91000.9666yesno
O09173HGD_MOUSE1, ., 1, 3, ., 1, 1, ., 50.56650.89120.9573yesno
Q4KI35HGD_PSEF51, ., 1, 3, ., 1, 1, ., 50.55060.88280.9723yesno
Q9VKJ0HGD_DROME1, ., 1, 3, ., 1, 1, ., 50.56360.89330.9726yesno
Q39J54HGD_BURS31, ., 1, 3, ., 1, 1, ., 50.54560.90580.9752yesno
Q0BHW3HGD_BURCM1, ., 1, 3, ., 1, 1, ., 50.55520.89740.9662yesno
A9AFM6HGD_BURM11, ., 1, 3, ., 1, 1, ., 50.55290.89740.9662yesno
Q7VUG2HGD_BORPE1, ., 1, 3, ., 1, 1, ., 50.53890.89740.9930yesno
Q9X4G0HGD_PSEAE1, ., 1, 3, ., 1, 1, ., 50.55170.88910.9837yesno
Q8PDA2HGD_XANCP1, ., 1, 3, ., 1, 1, ., 50.52820.89330.9384yesno
B1JWJ3HGD_BURCC1, ., 1, 3, ., 1, 1, ., 50.55520.89740.9662yesno
Q2KYC8HGD_BORA11, ., 1, 3, ., 1, 1, ., 50.54330.89330.9884yesno
B1J390HGD_PSEPW1, ., 1, 3, ., 1, 1, ., 50.54830.87860.9699yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.13.11.50.979
3rd Layer1.13.110.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query478
PLN02658435 PLN02658, PLN02658, homogentisate 1,2-dioxygenase 0.0
PRK05341438 PRK05341, PRK05341, homogentisate 1,2-dioxygenase; 0.0
pfam04209422 pfam04209, HgmA, homogentisate 1,2-dioxygenase 0.0
TIGR01015429 TIGR01015, hmgA, homogentisate 1,2-dioxygenase 0.0
COG3508427 COG3508, HmgA, Homogentisate 1,2-dioxygenase [Seco 1e-174
>gnl|CDD|215355 PLN02658, PLN02658, homogentisate 1,2-dioxygenase Back     alignment and domain information 
 Score =  893 bits (2310), Expect = 0.0
 Identities = 365/435 (83%), Positives = 394/435 (90%), Gaps = 1/435 (0%)

Query: 26  YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPS 85
           Y+SGFGN FSSEA+ GALPRGQN+PL+CP+GLYAEQ+SGT+FT+PRKLN+RSWLYRIKPS
Sbjct: 1   YQSGFGNHFSSEALPGALPRGQNNPLLCPYGLYAEQLSGTAFTAPRKLNRRSWLYRIKPS 60

Query: 86  ATHEPFKPRVPAHGKLVSEFDKSNS-YTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSS 144
            THEPFKPRVPAH KLV EFD SNS  TTPTQLRW+P  +PDSP DF+DGL+T+CGAGS 
Sbjct: 61  VTHEPFKPRVPAHEKLVGEFDPSNSCETTPTQLRWRPFPVPDSPVDFVDGLFTVCGAGSP 120

Query: 145 FLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQG 204
           FLRHGYAIHMY ANKSMD+CAFCNADGDFL+VPQ+GRLWI TE GKL+VSPGEI V+P+G
Sbjct: 121 FLRHGYAIHMYVANKSMDDCAFCNADGDFLIVPQQGRLWIKTELGKLQVSPGEIVVIPRG 180

Query: 205 FRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGSRLGYTI 264
           FRFAV LPDGPSRGY+ EIFG HFQLPDLGPIGANGLA PRDFL P AWFE+GSR GYTI
Sbjct: 181 FRFAVDLPDGPSRGYVLEIFGGHFQLPDLGPIGANGLANPRDFLHPVAWFEDGSRPGYTI 240

Query: 265 VQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPT 324
           VQKFGGELFTA+QDFSPFNVVAWHGNYVPYKYDLSKFCP NTVL DH DPSINTVLTAPT
Sbjct: 241 VQKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLSKFCPVNTVLFDHADPSINTVLTAPT 300

Query: 325 DKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLH 384
           DKPGVAL DFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLI G YEAKADGFLPGGASLH
Sbjct: 301 DKPGVALADFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGSYEAKADGFLPGGASLH 360

Query: 385 SCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYR 444
           SCMTPHGPDT TYEATIAR     P K+T T+AFMFES LIPR+CPWALESPF D DYY+
Sbjct: 361 SCMTPHGPDTATYEATIARPCADAPSKLTGTLAFMFESSLIPRVCPWALESPFRDRDYYQ 420

Query: 445 CWIGLRSHFSYEEAD 459
           CWIGL+SHFS E+AD
Sbjct: 421 CWIGLKSHFSREDAD 435

Length = 435
>gnl|CDD|235421 PRK05341, PRK05341, homogentisate 1,2-dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|217966 pfam04209, HgmA, homogentisate 1,2-dioxygenase Back     alignment and domain information
>gnl|CDD|233233 TIGR01015, hmgA, homogentisate 1,2-dioxygenase Back     alignment and domain information
>gnl|CDD|226039 COG3508, HmgA, Homogentisate 1,2-dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 478
PRK05341438 homogentisate 1,2-dioxygenase; Provisional 100.0
PLN02658435 homogentisate 1,2-dioxygenase 100.0
TIGR01015429 hmgA homogentisate 1,2-dioxygenase. Missing in hum 100.0
KOG1417446 consensus Homogentisate 1,2-dioxygenase [Amino aci 100.0
PF04209424 HgmA: homogentisate 1,2-dioxygenase; InterPro: IPR 100.0
COG3508427 HmgA Homogentisate 1,2-dioxygenase [Secondary meta 100.0
TIGR03404367 bicupin_oxalic bicupin, oxalate decarboxylase fami 97.47
TIGR03037159 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase 97.44
COG0662127 {ManC} Mannose-6-phosphate isomerase [Carbohydrate 97.36
PF0788371 Cupin_2: Cupin domain; InterPro: IPR013096 This fa 97.3
PRK13264177 3-hydroxyanthranilate 3,4-dioxygenase; Provisional 96.97
smart00835146 Cupin_1 Cupin. This family represents the conserve 96.86
PRK11171266 hypothetical protein; Provisional 96.42
PF02311136 AraC_binding: AraC-like ligand binding domain; Int 96.36
COG1917131 Uncharacterized conserved protein, contains double 96.27
PF0589974 Cupin_3: Protein of unknown function (DUF861); Int 96.22
PF06249152 EutQ: Ethanolamine utilisation protein EutQ; Inter 96.15
PRK09943185 DNA-binding transcriptional repressor PuuR; Provis 96.13
PF03079157 ARD: ARD/ARD' family; InterPro: IPR004313 The two 95.73
COG4766176 EutQ Ethanolamine utilization protein [Amino acid 95.63
PF00190144 Cupin_1: Cupin; InterPro: IPR006045 This family re 95.39
TIGR03214260 ura-cupin putative allantoin catabolism protein. T 95.38
TIGR03404367 bicupin_oxalic bicupin, oxalate decarboxylase fami 94.98
PRK10296278 DNA-binding transcriptional regulator ChbR; Provis 94.91
PRK15457233 ethanolamine utilization protein EutQ; Provisional 94.8
PF01050151 MannoseP_isomer: Mannose-6-phosphate isomerase; In 94.37
PRK04190191 glucose-6-phosphate isomerase; Provisional 94.12
TIGR01479468 GMP_PMI mannose-1-phosphate guanylyltransferase/ma 93.6
PRK13290125 ectC L-ectoine synthase; Reviewed 92.74
COG3450116 Predicted enzyme of the cupin superfamily [General 92.36
PLN00212493 glutelin; Provisional 91.07
PRK11171266 hypothetical protein; Provisional 90.98
TIGR02297287 HpaA 4-hydroxyphenylacetate catabolism regulatory 90.92
PRK00924276 5-keto-4-deoxyuronate isomerase; Provisional 90.87
PF1297391 Cupin_7: ChrR Cupin-like domain; PDB: 3O14_B 2Z2S_ 90.8
PRK15460478 cpsB mannose-1-phosphate guanyltransferase; Provis 90.57
PF14525172 AraC_binding_2: AraC-binding-like domain 90.51
PF12852186 Cupin_6: Cupin 90.07
COG2140209 Thermophilic glucose-6-phosphate isomerase and rel 89.55
PRK13502282 transcriptional activator RhaR; Provisional 89.43
PRK10572290 DNA-binding transcriptional regulator AraC; Provis 89.23
PF1169985 CENP-C_C: Mif2/CENP-C like; PDB: 2VPV_B. 89.1
PRK13500312 transcriptional activator RhaR; Provisional 87.56
PRK13501290 transcriptional activator RhaR; Provisional 87.55
COG1791181 Uncharacterized conserved protein, contains double 87.47
COG3837161 Uncharacterized conserved protein, contains double 86.88
PRK13503278 transcriptional activator RhaS; Provisional 85.85
PRK10371302 DNA-binding transcriptional regulator MelR; Provis 85.67
PF06052151 3-HAO: 3-hydroxyanthranilic acid dioxygenase; Inte 84.42
PF04962261 KduI: KduI/IolB family; InterPro: IPR021120 The Kd 83.12
KOG2107179 consensus Uncharacterized conserved protein, conta 82.88
PRK09685302 DNA-binding transcriptional activator FeaR; Provis 82.78
COG4101142 Predicted mannose-6-phosphate isomerase [Carbohydr 82.74
TIGR03214260 ura-cupin putative allantoin catabolism protein. T 82.33
TIGR02451215 anti_sig_ChrR anti-sigma factor, putative, ChrR fa 80.29
>PRK05341 homogentisate 1,2-dioxygenase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.3e-177  Score=1361.41  Aligned_cols=431  Identities=58%  Similarity=1.067  Sum_probs=413.2

Q ss_pred             CCCCCCcccccCCCcccccccCCCCCCCCCCCCCCCCCceeccccCccccCCCCCCCceeecccCCCCCcCCCccCCCCC
Q 011768           19 EDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAH   98 (478)
Q Consensus        19 ~~~~~~~Y~~Gfgn~~~sEa~pGaLP~~qnspq~~~~gLYaEqlsGtaFt~pr~~n~~swlYRirPs~~h~~~~~~~~~~   98 (478)
                      ...+++.||+||||+|+|||||||||+||||||||+|||||||||||||||||++|+|||||||||||+|++|++++.  
T Consensus         7 ~~~~~~~Y~~Gfgn~~~sEa~pgalP~gqnsPq~~~~gLyaEqlsgtaFtapr~~n~rswlYRirPs~~h~~f~~~~~--   84 (438)
T PRK05341          7 SAANTLGYQSGFGNEFATEALPGALPVGQNSPQRAPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPSVVHGPFEPVDS--   84 (438)
T ss_pred             CCCCCcccccccCCcccccccCCCCCCCCCCcccCCcccchhhccCccccCcCccccceeEEeechhhcCCCcccccc--
Confidence            445679999999999999999999999999999999999999999999999999999999999999999999998763  


Q ss_pred             CCccccCCCCCCCCCCCccccCCCCCCCCCCCcccceeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEEE
Q 011768           99 GKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQ  178 (478)
Q Consensus        99 ~~~~~~~~~~~~~~~P~~lrW~p~~~p~~~~Dfv~gl~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~pq  178 (478)
                      ..+... ...  +.+||||||+|+++|++++|||+||+||+||||+++|+|++||+|+||+||.+++|||+|||+|||||
T Consensus        85 ~~~~~~-~~~--~~~p~q~rW~P~~~p~~~~Dfv~gl~tl~gngD~~~~~G~ai~~y~~n~sM~~~~f~NaDGD~Livpq  161 (438)
T PRK05341         85 RLWRTF-DEV--PTPPNQLRWDPLPLPAEPTDFVDGLVTMAGNGDAEAQAGMAIHLYAANRSMQDRYFYNADGELLIVPQ  161 (438)
T ss_pred             cccccc-ccc--CCCccccccCCCCCCCCCCCchhhhhhhhcCCCcccccccEEEEEeCCCCcccceeecCCCCEEEEEE
Confidence            222121 234  68999999999999988999999999999999999999999999999999988899999999999999


Q ss_pred             eCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEcCCeeeeCCCCCCCCCCCCCCCCccCCcccccccc
Q 011768          179 KGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEGS  258 (478)
Q Consensus       179 ~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~~~~~~LPelGpiG~nglan~RDf~~P~a~~e~~~  258 (478)
                      +|+|+|+||||+|+|+|||||||||||+|||+++++++||||||++|+||+||||||||+|||||+|||++|+|+|||. 
T Consensus       162 ~G~l~i~TEfG~L~v~pgei~VIPRG~~frv~l~~gp~rgyi~E~~g~~f~LPdlGpiG~nglanpRDF~~P~a~~ed~-  240 (438)
T PRK05341        162 QGRLRLATELGVLDVEPGEIAVIPRGVKFRVELPDGPARGYVCENYGAPFRLPDLGPIGANGLANPRDFLTPVAAFEDR-  240 (438)
T ss_pred             eCCEEEEEeccceEecCCCEEEEcCccEEEEecCCCCeeEEEEEecCCcccCCCCCcccccCCCChhHcCCCcchhccc-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999885 


Q ss_pred             cccEEEEEEECCceEEEEcCCCCCeEeeecCCccceeeccCCcccccccccccCCCCcceEEeecCCCCCceEEEeeeeC
Q 011768          259 RLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFP  338 (478)
Q Consensus       259 ~~~~~vv~K~~g~l~~~~~~hsPfDVVaWhGn~~Pykydl~~F~pi~svs~dH~dPSi~tvlta~s~~pG~av~dFviF~  338 (478)
                      +++|+|++|++|+||+++|+||||||||||||||||||||+||+|||||++||+||||||||||||++||+|+||||||+
T Consensus       241 ~~~~~vv~K~~G~l~~~~~~hsPfDVVaWhGn~~Pykydl~~F~pi~svs~dH~dPSI~tvltaps~~pg~a~~dFVIF~  320 (438)
T PRK05341        241 EGPFELVAKFGGRLWRAEIDHSPLDVVAWHGNYAPYKYDLRRFNTIGSISFDHPDPSIFTVLTSPSDTPGTANIDFVIFP  320 (438)
T ss_pred             CCCEEEEEEeCCeeEEEecCCCCceEeeecCcccceEeehhheeeccccccccCCCCceEEEeccCCCCCccccceEEEC
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCCCCCCCCCCCcccccceeeecccccccCCcCCCeeeeecCCCCCCCChHHHHHHHhcCCCCCCceeccceeE
Q 011768          339 PRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAF  418 (478)
Q Consensus       339 PRw~~~e~TfRpPYyHrNv~sE~mg~i~G~y~ar~~gf~pG~~SLHp~g~pHGP~~~~~e~a~~~~~~l~P~~~~~~lAf  418 (478)
                      |||+++|+||||||||||+||||||||+|+|+||++||+|||+||||+|+|||||++++|+|+++  +|+|+|+++||||
T Consensus       321 PRw~v~e~TfrpPyyHrNv~sEfmgli~G~y~ak~~gf~pGg~SLH~~~~pHGPd~~a~e~a~~~--~l~p~k~~~~lAf  398 (438)
T PRK05341        321 PRWLVAENTFRPPWFHRNVMSEFMGLIHGVYDAKAEGFVPGGASLHNCMSPHGPDAETFEKASNA--DLKPHKIDNTMAF  398 (438)
T ss_pred             CcccCCCCccCCCCCccchhhhhhhhccccccccccCcCCCeeeecCCCCCCCCCHHHHHHhhcc--ccCCccccceEEE
Confidence            99999999999999999999999999999999998899999999999999999999999999999  9999999999999


Q ss_pred             EeeeccCcccchhhhcCCCCChhhhhchhhhhcCCCCCc
Q 011768          419 MFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEE  457 (478)
Q Consensus       419 MfET~~~l~~T~~A~~~~~~d~~Y~~~W~~l~~~f~~~~  457 (478)
                      ||||+++|++|+||++++.+|++|++||++|+++|+++.
T Consensus       399 MfET~~~l~~t~~A~~~~~~d~~Y~~~W~~l~~~f~~~~  437 (438)
T PRK05341        399 MFETRYPIRPTRFALETPQLQADYDDCWQGLKKHFDPER  437 (438)
T ss_pred             EEEccccccccHHHHhCccccccHHHHHHhHhhcCCCCC
Confidence            999999999999999987789999999999999997643

>PLN02658 homogentisate 1,2-dioxygenase Back     alignment and domain information
>TIGR01015 hmgA homogentisate 1,2-dioxygenase Back     alignment and domain information
>KOG1417 consensus Homogentisate 1,2-dioxygenase [Amino acid transport and metabolism] Back     alignment and domain information
>PF04209 HgmA: homogentisate 1,2-dioxygenase; InterPro: IPR005708 Alkaptonuria (AKU), a rare hereditary disorder, was the first disease to be interpreted as an inborn error of metabolism Back     alignment and domain information
>COG3508 HmgA Homogentisate 1,2-dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family Back     alignment and domain information
>TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase Back     alignment and domain information
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel) Back     alignment and domain information
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional Back     alignment and domain information
>smart00835 Cupin_1 Cupin Back     alignment and domain information
>PRK11171 hypothetical protein; Provisional Back     alignment and domain information
>PF02311 AraC_binding: AraC-like ligand binding domain; InterPro: IPR003313 This entry defines the arabinose-binding and dimerisation domain of the bacterial gene regulatory protein AraC Back     alignment and domain information
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] Back     alignment and domain information
>PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown Back     alignment and domain information
>PF06249 EutQ: Ethanolamine utilisation protein EutQ; InterPro: IPR010424 The eut operon of Salmonella typhimurium encodes proteins involved in the cobalamin-dependent degradation of ethanolamine Back     alignment and domain information
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional Back     alignment and domain information
>PF03079 ARD: ARD/ARD' family; InterPro: IPR004313 The two acireductone dioxygenase enzymes (ARD and ARD', previously known as E-2 and E-2') from Klebsiella pneumoniae share the same amino acid sequence Q9ZFE7 from SWISSPROT, but bind different metal ions: ARD binds Ni2+, ARD' binds Fe2+ [] Back     alignment and domain information
>COG4766 EutQ Ethanolamine utilization protein [Amino acid transport and metabolism] Back     alignment and domain information
>PF00190 Cupin_1: Cupin; InterPro: IPR006045 This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel) Back     alignment and domain information
>TIGR03214 ura-cupin putative allantoin catabolism protein Back     alignment and domain information
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family Back     alignment and domain information
>PRK10296 DNA-binding transcriptional regulator ChbR; Provisional Back     alignment and domain information
>PRK15457 ethanolamine utilization protein EutQ; Provisional Back     alignment and domain information
>PF01050 MannoseP_isomer: Mannose-6-phosphate isomerase; InterPro: IPR001538 Mannose-6-phosphate isomerase or phosphomannose isomerase (5 Back     alignment and domain information
>PRK04190 glucose-6-phosphate isomerase; Provisional Back     alignment and domain information
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Back     alignment and domain information
>PRK13290 ectC L-ectoine synthase; Reviewed Back     alignment and domain information
>COG3450 Predicted enzyme of the cupin superfamily [General function prediction only] Back     alignment and domain information
>PLN00212 glutelin; Provisional Back     alignment and domain information
>PRK11171 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02297 HpaA 4-hydroxyphenylacetate catabolism regulatory protein HpaA Back     alignment and domain information
>PRK00924 5-keto-4-deoxyuronate isomerase; Provisional Back     alignment and domain information
>PF12973 Cupin_7: ChrR Cupin-like domain; PDB: 3O14_B 2Z2S_F 2Q1Z_B 3EBR_A Back     alignment and domain information
>PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional Back     alignment and domain information
>PF14525 AraC_binding_2: AraC-binding-like domain Back     alignment and domain information
>PF12852 Cupin_6: Cupin Back     alignment and domain information
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK13502 transcriptional activator RhaR; Provisional Back     alignment and domain information
>PRK10572 DNA-binding transcriptional regulator AraC; Provisional Back     alignment and domain information
>PF11699 CENP-C_C: Mif2/CENP-C like; PDB: 2VPV_B Back     alignment and domain information
>PRK13500 transcriptional activator RhaR; Provisional Back     alignment and domain information
>PRK13501 transcriptional activator RhaR; Provisional Back     alignment and domain information
>COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] Back     alignment and domain information
>COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] Back     alignment and domain information
>PRK13503 transcriptional activator RhaS; Provisional Back     alignment and domain information
>PRK10371 DNA-binding transcriptional regulator MelR; Provisional Back     alignment and domain information
>PF06052 3-HAO: 3-hydroxyanthranilic acid dioxygenase; InterPro: IPR010329 Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase (1 Back     alignment and domain information
>PF04962 KduI: KduI/IolB family; InterPro: IPR021120 The KduI/IolB family of enzymes includes 5-keto 4-deoxyuronate isomerase (KduI) and 5-deoxy-glucuronate isomerase (IolB) Back     alignment and domain information
>KOG2107 consensus Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] Back     alignment and domain information
>PRK09685 DNA-binding transcriptional activator FeaR; Provisional Back     alignment and domain information
>COG4101 Predicted mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03214 ura-cupin putative allantoin catabolism protein Back     alignment and domain information
>TIGR02451 anti_sig_ChrR anti-sigma factor, putative, ChrR family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query478
1ey2_A471 Human Homogentisate Dioxygenase With Fe(ii) Length 1e-135
>pdb|1EY2|A Chain A, Human Homogentisate Dioxygenase With Fe(ii) Length = 471 Back     alignment and structure 
Iteration: 1

 Score =  478 bits (1230), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 245/441 (55%), Positives = 307/441 (69%), Gaps = 15/441 (3%)
Query: 22  SDLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWL 79
           ++L Y SGFGN  SSE     G+LP GQN+P VCP+ LYAEQ+SG++FT PR  N+RSWL
Sbjct: 28  AELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWL 87
Query: 80  YRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDS---PTDFIDGLY 136
           YRI PS +H+PF+     H  +   +D+ +    P QLRWKP +IP +     DF+ GL+
Sbjct: 88  YRILPSVSHKPFESIDEGH--VTHNWDEVDP--DPNQLRWKPFEIPKASQKKVDFVSGLH 143
Query: 137 TICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPG 196
           T+CGAG     +G AIH++  N S +N  F N+DGDFL+VPQKG L I TE GK  V P 
Sbjct: 144 TLCGAGDIKSNNGLAIHIFLCNTSXENRCFYNSDGDFLIVPQKGNLLIYTEFGKXLVQPN 203
Query: 197 EIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEE 256
           EI V+ +G RF++ + +  +RGYI E++G HF+LPDLGPIGANGLA PRDFL+P AW+E+
Sbjct: 204 EICVIQRGXRFSIDVFE-ETRGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYED 262
Query: 257 GSRLG-YTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPS 315
               G YT++ K+ G+LF A+QD SPFNVVAWHGNY PYKY+L  F   N+V  DH DPS
Sbjct: 263 RQVPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFXVINSVAFDHADPS 322
Query: 316 INTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADG 375
           I TVLTA + +PGVA+ DFVIFPPRW VA+ TFRPPYYHRNC SEF GLIRG YEAK  G
Sbjct: 323 IFTVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCXSEFXGLIRGHYEAKQGG 382
Query: 376 FLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITD-TMAFMFESCLIPRICPWALE 434
           FLPGG SLHS  TPHGPD   +E   A   +  P +I D T AF FES L   +  W L+
Sbjct: 383 FLPGGGSLHSTXTPHGPDADCFEK--ASKVKLAPERIADGTXAFXFESSLSLAVTKWGLK 440
Query: 435 -SPFMDHDYYRCWIGLRSHFS 454
            S  +D +Y++CW  L+SHF+
Sbjct: 441 ASRCLDENYHKCWEPLKSHFT 461

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query478
1eyb_A471 Homogentisate 1,2-dioxygenase; jelly roll, beta sa 1e-164
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A Length = 471 Back     alignment and structure
 Score =  471 bits (1214), Expect = e-164
 Identities = 254/460 (55%), Positives = 313/460 (68%), Gaps = 17/460 (3%)

Query: 5   SQHQSSSLIRKTDG--EDFSDLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAE 60
             H SS  I   D      ++L Y SGFGN  SSE     G+LP GQN+P VCP+ LYAE
Sbjct: 9   HHHHSSGHIDDDDKHMGSMAELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAE 68

Query: 61  QISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWK 120
           Q+SG++FT PR  N+RSWLYRI PS +H+PF+     H       +       P QLRWK
Sbjct: 69  QLSGSAFTCPRSTNKRSWLYRILPSVSHKPFESIDEGH----VTHNWDEVDPDPNQLRWK 124

Query: 121 PVDIP---DSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVP 177
           P +IP       DF+ GL+T+CGAG     +G AIH++  N SM+N  F N+DGDFL+VP
Sbjct: 125 PFEIPKASQKKVDFVSGLHTLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVP 184

Query: 178 QKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIG 237
           QKG L I TE GK+ V P EI V+ +G RF++ + +  +RGYI E++G HF+LPDLGPIG
Sbjct: 185 QKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFE-ETRGYILEVYGVHFELPDLGPIG 243

Query: 238 ANGLAAPRDFLVPTAWFEEGSRLG-YTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKY 296
           ANGLA PRDFL+P AW+E+    G YT++ K+ G+LF A+QD SPFNVVAWHGNY PYKY
Sbjct: 244 ANGLANPRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKY 303

Query: 297 DLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRN 356
           +L  F   N+V  DH DPSI TVLTA + +PGVA+ DFVIFPPRW VA+ TFRPPYYHRN
Sbjct: 304 NLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRN 363

Query: 357 CMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKI-TDT 415
           CMSEFMGLIRG YEAK  GFLPGG SLHS MTPHGPD   +E   A   +  P +I   T
Sbjct: 364 CMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCFEK--ASKVKLAPERIADGT 421

Query: 416 MAFMFESCLIPRICPWALE-SPFMDHDYYRCWIGLRSHFS 454
           MAFMFES L   +  W L+ S  +D +Y++CW  L+SHF+
Sbjct: 422 MAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFT 461
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query478
1eyb_A471 Homogentisate 1,2-dioxygenase; jelly roll, beta sa 100.0
3d0j_A140 Uncharacterized protein CA_C3497; beta-barrel, str 97.81
3ibm_A167 Cupin 2, conserved barrel domain protein; cupin 2 97.68
3myx_A238 Uncharacterized protein pspto_0244; protein of unk 97.68
3lwc_A119 Uncharacterized protein; structural genomics, unkn 97.56
1v70_A105 Probable antibiotics synthesis protein; structural 97.48
3l2h_A162 Putative sugar phosphate isomerase; AFE_0303, stru 97.38
3d82_A102 Cupin 2, conserved barrel domain protein; structur 97.37
2opk_A112 Hypothetical protein; putative mannose-6-phosphate 97.34
2gu9_A113 Tetracenomycin polyketide synthesis protein; X-RAY 97.33
2i45_A107 Hypothetical protein; neisseria meningitidis cupin 97.24
1yfu_A174 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxid 97.23
4e2g_A126 Cupin 2 conserved barrel domain protein; MCSG, PSI 97.2
3bcw_A123 Uncharacterized protein; structural genomics, join 97.17
1fi2_A201 Oxalate oxidase, germin; beta-jellyroll, oxidoredu 97.11
1yhf_A115 Hypothetical protein SPY1581; structural genomics, 97.08
4h7l_A157 Uncharacterized protein; structural genomics, PSI- 97.07
4axo_A151 EUTQ, ethanolamine utilization protein; structural 97.06
2oa2_A148 BH2720 protein; 10175341, structural genomics, joi 97.05
2b8m_A117 Hypothetical protein MJ0764; structural genomics, 97.05
3ht1_A145 REMF protein; cupin fold, Zn-binding, antibiotic b 97.03
2o8q_A134 Hypothetical protein; cpuin-like fold, structural 96.99
4i4a_A128 Similar to unknown protein; structural genomics, P 96.98
3jzv_A166 Uncharacterized protein RRU_A2000; structural geno 96.96
1o5u_A101 Novel thermotoga maritima enzyme TM1112; cupin, st 96.92
2fqp_A97 Hypothetical protein BP2299; double-stranded beta- 96.88
1vj2_A126 Novel manganese-containing cupin TM1459; structura 96.84
3i7d_A163 Sugar phosphate isomerase; YP_168127.1, structural 96.84
2pfw_A116 Cupin 2, conserved barrel domain protein; cupin do 96.78
3es4_A116 Uncharacterized protein DUF861 with A RMLC-like C; 96.72
3fjs_A114 Uncharacterized protein with RMLC-like cupin fold; 96.71
2pyt_A133 Ethanolamine utilization protein EUTQ; structural 96.7
3cew_A125 Uncharacterized cupin protein; all beta-protein, j 96.68
2q30_A110 Uncharacterized protein; double-stranded beta-heli 96.67
1juh_A350 Quercetin 2,3-dioxygenase; cupin, glycoprotein, be 96.65
1lr5_A163 Auxin binding protein 1; beta jellyroll, double st 96.59
2bnm_A198 Epoxidase; oxidoreductase, cupin, HTH, cation-depe 96.56
1zvf_A176 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll b 96.55
2vpv_A166 Protein MIF2, MIF2P; nucleus, mitosis, centromere, 96.52
2ozj_A114 Cupin 2, conserved barrel; cupin superfamily prote 96.52
3myx_A238 Uncharacterized protein pspto_0244; protein of unk 96.49
1dgw_A178 Canavalin; duplicated swiss-roll beta barrels, loo 96.48
2qnk_A286 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fol 96.4
3h8u_A125 Uncharacterized conserved protein with double-STR 96.38
1y3t_A337 Hypothetical protein YXAG; BI cupin, dioxygenase, 96.35
3kgz_A156 Cupin 2 conserved barrel domain protein; metallopr 96.34
2xlg_A239 SLL1785 protein, CUCA; metal binding protein, cupi 96.29
2vqa_A361 SLL1358 protein, MNCA; periplasmic binding protein 96.27
1vr3_A191 Acireductone dioxygenase; 13543033, structural gen 96.19
4b29_A217 Dimethylsulfoniopropionate lyase; hydrolase, dimet 96.16
1y3t_A337 Hypothetical protein YXAG; BI cupin, dioxygenase, 96.11
2f4p_A147 Hypothetical protein TM1010; double-stranded beta- 96.09
1o4t_A133 Putative oxalate decarboxylase; double-stranded be 96.06
1rc6_A261 Hypothetical protein YLBA; structural genomics, NY 96.01
3rns_A227 Cupin 2 conserved barrel domain protein; structura 95.93
1x82_A190 Glucose-6-phosphate isomerase; cupin superfamily, 95.66
2ozi_A98 Hypothetical protein RPA4178; APC6210, putative pr 95.57
3rns_A227 Cupin 2 conserved barrel domain protein; structura 95.47
2arc_A164 ARAC, arabinose operon regulatory protein; transcr 95.47
3es1_A172 Cupin 2, conserved barrel domain protein; YP_00116 95.34
2vqa_A361 SLL1358 protein, MNCA; periplasmic binding protein 95.3
1juh_A350 Quercetin 2,3-dioxygenase; cupin, glycoprotein, be 95.25
1sq4_A278 GLXB, glyoxylate-induced protein; structural genom 95.21
3gbg_A276 TCP pilus virulence regulatory protein; cupin, hel 95.18
3h7j_A243 Bacilysin biosynthesis protein BACB; YWFC, bacilys 95.08
1sef_A274 Conserved hypothetical protein; structural genomic 95.02
3h7j_A243 Bacilysin biosynthesis protein BACB; YWFC, bacilys 94.92
1y9q_A192 Transcriptional regulator, HTH_3 family; transcrip 94.85
1j58_A385 YVRK protein; cupin, decarboxyklase, oxalate, mang 94.6
1j58_A385 YVRK protein; cupin, decarboxyklase, oxalate, mang 94.47
2d5f_A493 Glycinin A3B4 subunit; soybean, globulin, 11S,SEED 94.36
1uij_A416 Beta subunit of beta conglycinin; double-stranded 94.33
1zrr_A179 E-2/E-2' protein; nickel, cupin, beta helix, methi 94.28
1rc6_A261 Hypothetical protein YLBA; structural genomics, NY 94.11
2d40_A354 Z3393, putative gentisate 1,2-dioxygenase; gentisi 93.87
1fxz_A476 Glycinin G1; proglycinin, legumin, SEED storage pr 93.85
1sfn_A246 Conserved hypothetical protein; structural genomic 93.84
3bu7_A394 Gentisate 1,2-dioxygenase; cupin domain, oxidoredu 93.83
3ebr_A159 Uncharacterized RMLC-like cupin; structural genomi 93.77
2ea7_A434 7S globulin-1; beta barrel, cupin superfamily, pla 93.55
1sef_A274 Conserved hypothetical protein; structural genomic 93.41
3ksc_A496 LEGA class, prolegumin; PEA prolegumin, 11S SEED s 93.03
3c3v_A510 Arachin ARAH3 isoform; peanut allergen, allergy, g 93.0
1uij_A416 Beta subunit of beta conglycinin; double-stranded 92.93
2o1q_A145 Putative acetyl/propionyl-COA carboxylase, alpha; 92.86
3qac_A465 11S globulin SEED storage protein; 11S SEED storag 92.71
3lag_A98 Uncharacterized protein RPA4178; functionally unkn 92.43
2ea7_A434 7S globulin-1; beta barrel, cupin superfamily, pla 92.23
4e2q_A266 Ureidoglycine aminohydrolase; BI-cupin, manganese 92.14
3fz3_A531 Prunin; TREE NUT allergen, allergy, amandin, almon 92.13
3nw4_A368 Gentisate 1,2-dioxygenase; beta-barrel, oxidoreduc 91.99
3s7i_A418 Allergen ARA H 1, clone P41B; bicupin, vicilin, st 91.91
2cav_A445 Protein (canavalin); vicilin, 7S SEED protein, dom 91.87
2phl_A397 Phaseolin; plant SEED storage protein(vicilin); HE 91.87
2d5f_A493 Glycinin A3B4 subunit; soybean, globulin, 11S,SEED 91.85
1fxz_A476 Glycinin G1; proglycinin, legumin, SEED storage pr 91.83
3ksc_A496 LEGA class, prolegumin; PEA prolegumin, 11S SEED s 91.83
2e9q_A459 11S globulin subunit beta; cucubitin, pumpkin SEED 91.79
2d40_A354 Z3393, putative gentisate 1,2-dioxygenase; gentisi 90.84
2e9q_A459 11S globulin subunit beta; cucubitin, pumpkin SEED 90.57
3kgl_A466 Cruciferin; 11S SEED globulin, rapeseed, SEED stor 90.42
3qac_A465 11S globulin SEED storage protein; 11S SEED storag 90.2
3cjx_A165 Protein of unknown function with A cupin-like FOL; 90.0
3c3v_A510 Arachin ARAH3 isoform; peanut allergen, allergy, g 89.9
3o14_A223 Anti-ecfsigma factor, CHRR; cupin, structural geno 89.59
3bu7_A394 Gentisate 1,2-dioxygenase; cupin domain, oxidoredu 89.44
1sfn_A246 Conserved hypothetical protein; structural genomic 89.2
3nw4_A368 Gentisate 1,2-dioxygenase; beta-barrel, oxidoreduc 88.94
2phl_A397 Phaseolin; plant SEED storage protein(vicilin); HE 88.81
2qnk_A286 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fol 87.93
3s7i_A418 Allergen ARA H 1, clone P41B; bicupin, vicilin, st 87.92
2q1z_B195 Anti-sigma factor CHRR, transcriptional activator; 87.25
1xru_A282 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; 83.65
2cav_A445 Protein (canavalin); vicilin, 7S SEED protein, dom 83.12
1ywk_A289 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomer 82.71
2qjv_A270 Uncharacterized IOLB-like protein; structural geno 81.98
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A Back     alignment and structure
Probab=100.00  E-value=3.4e-173  Score=1340.74  Aligned_cols=444  Identities=57%  Similarity=1.061  Sum_probs=388.5

Q ss_pred             ccccccccccC--CCCCCCCcccccCCCcccccc--cCCCCCCCCCCCCCCCCCceeccccCccccCCCCCCCceeeccc
Q 011768            7 HQSSSLIRKTD--GEDFSDLNYESGFGNSFSSEA--IDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRI   82 (478)
Q Consensus         7 ~~~~~~~~~~~--~~~~~~~~Y~~Gfgn~~~sEa--~pGaLP~~qnspq~~~~gLYaEqlsGtaFt~pr~~n~~swlYRi   82 (478)
                      |.||--+.+.+  --.+++|.||+||||+|+|||  +|||||+||||||+|+||||+||||||+||+||++|+|||||||
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~y~~Gfgn~~~sEavr~pgalP~gqnsPq~~~~gLYaEqLsGtaFtapr~~n~rSwLYri   90 (471)
T 1eyb_A           11 HHSSGHIDDDDKHMGSMAELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRI   90 (471)
T ss_dssp             -----------------CCCCEEECTTCCEEEECTTSTTCSCSSCSCCSSCGGGCEEEEEESSCTTSCGGGCCEEEEEES
T ss_pred             ccccCCcCccccccCCCcchhhhhhhcccChhhHhhCCCCCcccccCcccCCCccchhhhcCCcccCccccccceeeecc
Confidence            45555555544  225678999999999999999  99999999999999999999999999999999999999999999


Q ss_pred             CCCCCcCCCccCCCCCCCccccCCCCCCCCCCCccccCCCCCCCC---CCCcccceeeeeecCCcccccccEEEEEEeCC
Q 011768           83 KPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDS---PTDFIDGLYTICGAGSSFLRHGYAIHMYTANK  159 (478)
Q Consensus        83 rPs~~h~~~~~~~~~~~~~~~~~~~~~~~~~P~~lrW~p~~~p~~---~~Dfv~gl~tl~g~gD~~~~~G~ai~~y~~~~  159 (478)
                      |||++|++|++...  ......+...  ...|+||||+|+++|++   ++|||+||+|||||||+++|+|++||+|+||+
T Consensus        91 rPs~~h~~~~~~~~--~~~~~~~~~~--~~~p~qLrw~p~~ip~~~~~~~Dfv~Gl~tl~gngD~~~~~G~aI~~y~~n~  166 (471)
T 1eyb_A           91 LPSVSHKPFESIDE--GHVTHNWDEV--DPDPNQLRWKPFEIPKASQKKVDFVSGLHTLCGAGDIKSNNGLAIHIFLCNT  166 (471)
T ss_dssp             SCTTCSCCCEECCC--TBCCCCGGGS--CCCCSCEEECSCCCCCTTTCCCCTTTTEEEEEEESCGGGTCCEEEEEEEECS
T ss_pred             CCcccccccccccc--cccCCccccc--CCCccccccCCCCCCccccCCCCcccchhheeccCCcccccceEEEEEeCCC
Confidence            99999999988752  1111211112  24599999999999853   78999999999999999999999999999999


Q ss_pred             CCCCcceecCCCCEEEEEEeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEcCCeeeeCCCCCCCCC
Q 011768          160 SMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGAN  239 (478)
Q Consensus       160 sM~~~~f~NaDGD~Li~pq~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~~~~~~LPelGpiG~n  239 (478)
                      ||.+++|||+|||||||||+|+|+|+||||+|+|+|||||||||||+|||++++ ++||||||++|+||+||||||||+|
T Consensus       167 sM~~~~f~NaDGD~Livpq~G~l~i~TEfG~L~v~pgei~VIPRGi~frv~l~~-p~Rgyi~E~~g~~f~LP~lGpiGan  245 (471)
T 1eyb_A          167 SMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFE-ETRGYILEVYGVHFELPDLGPIGAN  245 (471)
T ss_dssp             CCCSEEEEESSEEEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEECSS-SEEEEEEEEESCCEECCCCGGGTTS
T ss_pred             CcccceeecCCCCEEEEEEeCCEEEEEecccEEeccCCEEEECCccEEEEeeCC-CceEEEEEccCCccccccccccccC
Confidence            998889999999999999999999999999999999999999999999999987 9999999999999999999999999


Q ss_pred             CCCCCCCccCCccccccccccc--EEEEEEECCceEEEEcCCCCCeEeeecCCccceeeccCCcccccccccccCCCCcc
Q 011768          240 GLAAPRDFLVPTAWFEEGSRLG--YTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSIN  317 (478)
Q Consensus       240 glan~RDf~~P~a~~e~~~~~~--~~vv~K~~g~l~~~~~~hsPfDVVaWhGn~~Pykydl~~F~pi~svs~dH~dPSi~  317 (478)
                      ||||+|||++|+|+|+++ +++  |+||+|++|+||+++|+||||||||||||||||||||+||+||||||+||+|||||
T Consensus       246 glan~RDF~~PvA~~ed~-~~~~~~~vv~K~~G~l~~~~~~hsPfDVVaWhGn~~PYkydl~~F~pI~svs~dH~dPSIf  324 (471)
T 1eyb_A          246 GLANPRDFLIPIAWYEDR-QVPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIF  324 (471)
T ss_dssp             CBSCGGGEEEECCCCCCC-EEEEEEEEEEEETTEEEEEEEEECSCCEEEEEESCCCEEEEGGGCBCCCCSSSSCCCGGGG
T ss_pred             CccChhhccCcccccccc-CCCccEEEEEEeCCeeEEEecCCCCceEEeEcCcccCeEechHHcccccccccccCCCCcc
Confidence            999999999999999986 677  99999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCCCCceEEEeeeeCCccccCCCCCCCCCCCCCcccccceeeecccccccCCcCCCeeeeecCCCCCCCChHHH
Q 011768          318 TVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTY  397 (478)
Q Consensus       318 tvlta~s~~pG~av~dFviF~PRw~~~e~TfRpPYyHrNv~sE~mg~i~G~y~ar~~gf~pG~~SLHp~g~pHGP~~~~~  397 (478)
                      |||||||++|||||||||||||||+++|+||||||||||+||||||||+|+|+||++||+|||+||||+|+|||||+++|
T Consensus       325 tVltaps~~pg~av~dFViFpPRw~v~e~TfrpPyyHrNv~SEfmgli~G~y~ak~~Gf~pGg~SLH~~~~pHGPd~~~~  404 (471)
T 1eyb_A          325 TVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCF  404 (471)
T ss_dssp             EEEEEECSSTTCEEEEEEEECSEEECCSSSCCSCCCBCCSCEEEEEECCC--------CCTTCEEEECTTCCBCCCHHHH
T ss_pred             eEEEccCCCCCceEEeEeecCCccCCCCCccCCCCCccchhhhhhhhccccccccccCcCCCceeccCCCcCCCCChhhh
Confidence            99999999999999999999999999999999999999999999999999999998899999999999999999999999


Q ss_pred             HHHHhcCCCCCCceecc-ceeEEeeeccCcccchhhhcCC-CCChhhhhchhhhhcCCCCCcc
Q 011768          398 EATIARGSEAGPYKITD-TMAFMFESCLIPRICPWALESP-FMDHDYYRCWIGLRSHFSYEEA  458 (478)
Q Consensus       398 e~a~~~~~~l~P~~~~~-~lAfMfET~~~l~~T~~A~~~~-~~d~~Y~~~W~~l~~~f~~~~~  458 (478)
                      |+|+++  +|+|+|+++ ||||||||++||++|+||++++ .+|++|++||++|+++|+++.+
T Consensus       405 E~a~~~--~l~p~k~~d~~lAfMfET~~pl~~T~~Al~~~~~~d~~Y~~~W~~l~~~f~~~~~  465 (471)
T 1eyb_A          405 EKASKV--KLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNSR  465 (471)
T ss_dssp             HHHHHS--CCCCEEESTTCCEEEEEESSCCEECHHHHHHCC------------CCCCCCTTCC
T ss_pred             HHhhcc--ccCceecCCceEEEEEEccccccccHHHHhCccccCccHHHhhhhhhccCCCCCc
Confidence            999999  999999976 9999999999999999999976 6899999999999999997544
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824} Back     alignment and structure
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1} Back     alignment and structure
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV} Back     alignment and structure
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum} Back     alignment and structure
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A Back     alignment and structure
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans} Back     alignment and structure
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400} Back     alignment and structure
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha} Back     alignment and structure
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A Back     alignment and structure
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis} Back     alignment and structure
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A* Back     alignment and structure
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus} Back     alignment and structure
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50} Back     alignment and structure
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A Back     alignment and structure
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9 Back     alignment and structure
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus} Back     alignment and structure
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile} Back     alignment and structure
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans} Back     alignment and structure
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18 Back     alignment and structure
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A Back     alignment and structure
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans} Back     alignment and structure
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp} Back     alignment and structure
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A Back     alignment and structure
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I} Back     alignment and structure
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10 Back     alignment and structure
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3} Back     alignment and structure
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina} Back     alignment and structure
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str} Back     alignment and structure
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134} Back     alignment and structure
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24 Back     alignment and structure
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis} Back     alignment and structure
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A* Back     alignment and structure
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A* Back     alignment and structure
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A Back     alignment and structure
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20 Back     alignment and structure
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae} Back     alignment and structure
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense} Back     alignment and structure
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV} Back     alignment and structure
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A Back     alignment and structure
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A Back     alignment and structure
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A* Back     alignment and structure
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris} Back     alignment and structure
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A Back     alignment and structure
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP} Back     alignment and structure
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6 Back     alignment and structure
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism} Back     alignment and structure
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A* Back     alignment and structure
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9 Back     alignment and structure
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9 Back     alignment and structure
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11 Back     alignment and structure
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis} Back     alignment and structure
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A* Back     alignment and structure
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis} Back     alignment and structure
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A Back     alignment and structure
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} Back     alignment and structure
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP} Back     alignment and structure
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A* Back     alignment and structure
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11 Back     alignment and structure
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae} Back     alignment and structure
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A* Back     alignment and structure
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11 Back     alignment and structure
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A* Back     alignment and structure
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15 Back     alignment and structure
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A Back     alignment and structure
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A Back     alignment and structure
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A* Back     alignment and structure
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A Back     alignment and structure
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11 Back     alignment and structure
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23 Back     alignment and structure
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A Back     alignment and structure
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11 Back     alignment and structure
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23 Back     alignment and structure
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134} Back     alignment and structure
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A Back     alignment and structure
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11 Back     alignment and structure
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum} Back     alignment and structure
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea} Back     alignment and structure
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A* Back     alignment and structure
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21 Back     alignment and structure
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus} Back     alignment and structure
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris} Back     alignment and structure
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A Back     alignment and structure
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A Back     alignment and structure
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A Back     alignment and structure
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A Back     alignment and structure
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A Back     alignment and structure
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B Back     alignment and structure
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A* Back     alignment and structure
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A Back     alignment and structure
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A Back     alignment and structure
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum} Back     alignment and structure
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A Back     alignment and structure
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23 Back     alignment and structure
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A Back     alignment and structure
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus} Back     alignment and structure
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus} Back     alignment and structure
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha} Back     alignment and structure
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea} Back     alignment and structure
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei} Back     alignment and structure
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23 Back     alignment and structure
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11 Back     alignment and structure
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A Back     alignment and structure
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A* Back     alignment and structure
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A Back     alignment and structure
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A Back     alignment and structure
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A Back     alignment and structure
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B Back     alignment and structure
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13 Back     alignment and structure
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 478
d1eyba_439 b.82.1.4 (A:) Homogentisate dioxygenase {Human (Ho 0.0
>d1eyba_ b.82.1.4 (A:) Homogentisate dioxygenase {Human (Homo sapiens) [TaxId: 9606]} Length = 439 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: Homogentisate dioxygenase
domain: Homogentisate dioxygenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  569 bits (1467), Expect = 0.0
 Identities = 250/441 (56%), Positives = 312/441 (70%), Gaps = 15/441 (3%)

Query: 22  SDLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWL 79
           ++L Y SGFGN  SSE     G+LP GQN+P VCP+ LYAEQ+SG++FT PR  N+RSWL
Sbjct: 1   AELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWL 60

Query: 80  YRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIP---DSPTDFIDGLY 136
           YRI PS +H+PF+     H  +   +D+ +    P QLRWKP +IP       DF+ GL+
Sbjct: 61  YRILPSVSHKPFESIDEGH--VTHNWDEVD--PDPNQLRWKPFEIPKASQKKVDFVSGLH 116

Query: 137 TICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPG 196
           T+CGAG     +G AIH++  N SM+N  F N+DGDFL+VPQKG L I TE GK+ V P 
Sbjct: 117 TLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPN 176

Query: 197 EIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEE 256
           EI V+ +G RF++ + +  +RGYI E++G HF+LPDLGPIGANGLA PRDFL+P AW+E+
Sbjct: 177 EICVIQRGMRFSIDVFE-ETRGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYED 235

Query: 257 GSRLG-YTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPS 315
               G YT++ K+ G+LF A+QD SPFNVVAWHGNY PYKY+L  F   N+V  DH DPS
Sbjct: 236 RQVPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPS 295

Query: 316 INTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADG 375
           I TVLTA + +PGVA+ DFVIFPPRW VA+ TFRPPYYHRNCMSEFMGLIRG YEAK  G
Sbjct: 296 IFTVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGG 355

Query: 376 FLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKI-TDTMAFMFESCLIPRICPWALE 434
           FLPGG SLHS MTPHGPD   +E   A   +  P +I   TMAFMFES L   +  W L+
Sbjct: 356 FLPGGGSLHSTMTPHGPDADCFEK--ASKVKLAPERIADGTMAFMFESSLSLAVTKWGLK 413

Query: 435 -SPFMDHDYYRCWIGLRSHFS 454
            S  +D +Y++CW  L+SHF+
Sbjct: 414 ASRCLDENYHKCWEPLKSHFT 434

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query478
d1eyba_439 Homogentisate dioxygenase {Human (Homo sapiens) [T 100.0
d1y3ta1330 Hypothetical protein YxaG {Bacillus subtilis [TaxI 98.33
d1juha_348 Quercetin 2,3-dioxygenase {Aspergillus japonicus [ 97.47
d1v70a_105 Hypothetical protein TTHA0104 {Thermus thermophilu 97.22
d1yhfa1112 Hypothetical protein SPy1581 {Streptococcus pyogen 97.2
d1y3ta1330 Hypothetical protein YxaG {Bacillus subtilis [TaxI 97.04
d2pyta1128 Ethanolamine utilization protein EutQ {Salmonella 97.02
d2b8ma1108 Hypothetical protein MJ0764 {Archaeon Methanococcu 97.02
d1sefa_250 Hypothetical protein EF2996 {Enterococcus faecalis 96.89
d1vj2a_114 Hypothetical protein TM1459 {Thermotoga maritima [ 96.88
d1uika1203 Seed storage 7S protein {Soybean (Glycine max), be 96.87
d1juha_348 Quercetin 2,3-dioxygenase {Aspergillus japonicus [ 96.74
g1dgw.1168 Seed storage 7S protein {Jack bean (Canavalia ensi 96.62
d1o4ta_115 Hypothetical protein TM1287 {Thermotoga maritima [ 96.6
d1o5ua_88 Hypothetical protein TM1112 {Thermotoga maritima [ 96.54
d1od5a2173 Seed storage 7S protein {Soybean (Glycine max), gl 96.49
d1j58a_372 Oxalate decarboxylase OxdC (YvrK) {Bacillus subtil 96.47
d2et1a1201 Germin {Barley (Hordeum vulgare) [TaxId: 4513]} 96.38
d1fxza2174 Seed storage 7S protein {Soybean (Glycine max), pr 96.38
d1j58a_372 Oxalate decarboxylase OxdC (YvrK) {Bacillus subtil 96.15
d1uija1170 Seed storage 7S protein {Soybean (Glycine max), be 96.14
d1lr5a_160 Auxin binding protein {Maize (Zea mays) [TaxId: 45 96.07
d2phla2162 Seed storage 7S protein {French bean (Phaseolus vu 95.92
d1dgwa_178 Seed storage 7S protein {Jack bean (Canavalia ensi 95.88
d2f4pa1134 Hypothetical protein TM1010 {Thermotoga maritima [ 95.85
d1rc6a_253 Hypothetical protein YlbA {Escherichia coli [TaxId 95.83
d1rc6a_253 Hypothetical protein YlbA {Escherichia coli [TaxId 95.78
d1x82a_190 Glucose-6-phosphate isomerase, GPI {Archaeon Pyroc 95.65
d1uika2185 Seed storage 7S protein {Soybean (Glycine max), be 95.56
d2bnma2122 Hydroxypropylphosphonic acid epoxidase Fom4, C-ter 95.41
d1y9qa299 Probable transcriptional regulator VC1968, C-termi 95.4
d1zrra1179 Acireductone dioxygenase {Klebsiella pneumoniae [T 95.37
d1sq4a_273 Glyoxylate-induced protein PA1140 {Pseudomonas aer 95.31
d2phla1200 Seed storage 7S protein {French bean (Phaseolus vu 95.28
d1sefa_250 Hypothetical protein EF2996 {Enterococcus faecalis 95.2
d1vr3a1179 Acireductone dioxygenase {Mouse (Mus musculus) [Ta 95.13
d1sfna_245 Hypothetical protein DR1152 {Deinococcus radiodura 94.82
d1sfna_245 Hypothetical protein DR1152 {Deinococcus radiodura 94.61
d2d40a1308 Gentisate 1,2-dioxygenase {Escherichia coli [TaxId 94.61
d2arca_161 Regulatory protein AraC {Escherichia coli [TaxId: 94.47
d1fxza1239 Seed storage 7S protein {Soybean (Glycine max), pr 93.78
d1sq4a_273 Glyoxylate-induced protein PA1140 {Pseudomonas aer 93.74
d2d40a1308 Gentisate 1,2-dioxygenase {Escherichia coli [TaxId 92.5
d2phda1351 Gentisate 1,2-dioxygenase {Pseudaminobacter salicy 92.3
d1od5a1245 Seed storage 7S protein {Soybean (Glycine max), gl 90.87
d1yfua1174 3-hydroxyanthranilate-3,4-dioxygenase {Ralstonia m 90.82
d1zvfa1175 3-hydroxyanthranilate-3,4-dioxygenase {Baker's yea 86.85
d3bu7a1355 Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [ 85.9
d2phda1351 Gentisate 1,2-dioxygenase {Pseudaminobacter salicy 82.96
>d1eyba_ b.82.1.4 (A:) Homogentisate dioxygenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: RmlC-like cupins
family: Homogentisate dioxygenase
domain: Homogentisate dioxygenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-173  Score=1333.10  Aligned_cols=429  Identities=58%  Similarity=1.076  Sum_probs=391.6

Q ss_pred             CCcccccCCCccccc--ccCCCCCCCCCCCCCCCCCceeccccCccccCCCCCCCceeecccCCCCCcCCCccCCCCCCC
Q 011768           23 DLNYESGFGNSFSSE--AIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGK  100 (478)
Q Consensus        23 ~~~Y~~Gfgn~~~sE--a~pGaLP~~qnspq~~~~gLYaEqlsGtaFt~pr~~n~~swlYRirPs~~h~~~~~~~~~~~~  100 (478)
                      +++||+||||+|+||  |||||||+||||||||+|||||||||||+|||||++|+|||||||||||+|.+|++++.  ..
T Consensus         2 ~l~Y~~Gfgn~f~se~~a~pgalP~gqnsPq~~~~GLYaEqlsGtaFtapr~~n~rswlYRirPsv~h~~~~~~~~--~~   79 (439)
T d1eyba_           2 ELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRILPSVSHKPFESIDE--GH   79 (439)
T ss_dssp             CCCEEECTTCCEEEECTTSTTCSCSSCSCCSSCGGGCEEEEEESSCTTSCGGGCCEEEEEESSCTTCSCCCEECCC--TB
T ss_pred             CccccCCCCCccccccccCCCCCCCCCCCCCcCCCCcchhhccCCccCCCCccCceeeecccCccccCCCCcccCc--cc
Confidence            689999999999999  99999999999999999999999999999999999999999999999999999999873  33


Q ss_pred             ccccCCCCCCCCCCCccccCCCCCCC---CCCCcccceeeeeecCCcccccccEEEEEEeCCCCCCcceecCCCCEEEEE
Q 011768          101 LVSEFDKSNSYTTPTQLRWKPVDIPD---SPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVP  177 (478)
Q Consensus       101 ~~~~~~~~~~~~~P~~lrW~p~~~p~---~~~Dfv~gl~tl~g~gD~~~~~G~ai~~y~~~~sM~~~~f~NaDGD~Li~p  177 (478)
                      ....+.+.  +++||||||+|+++|+   +++|||+||+|||||||+++|+|++||+|.||+||++++|+||||||||||
T Consensus        80 ~~~~~~~~--~~~p~qlRW~P~~~p~~~~~~~dfv~Gl~t~~g~Gd~~~~~G~aihiy~~n~sM~~~~f~NADGDeLi~~  157 (439)
T d1eyba_          80 VTHNWDEV--DPDPNQLRWKPFEIPKASQKKVDFVSGLHTLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVP  157 (439)
T ss_dssp             CCCCGGGS--CCCCSCEEECSCCCCCTTTCCCCTTTTEEEEEEESCGGGTCCEEEEEEEECSCCCSEEEEESSEEEEEEE
T ss_pred             cCCChhhc--CCCccccccCCCCCCccccCCcchhhceeeecccCCcccccCcEEEEEecCCCCccceeEcCCCCEEEEE
Confidence            33334455  7899999999999993   578999999999999999999999999999999999889999999999999


Q ss_pred             EeCcEEEEeeceeeeecCCcEEEEcceeEEEEECCCCCeeEEEEEEcCCeeeeCCCCCCCCCCCCCCCCccCCccccccc
Q 011768          178 QKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEEG  257 (478)
Q Consensus       178 q~G~l~l~TEfG~L~v~pGd~vVIPRGi~frv~l~~g~~rgyi~E~~~~~~~LPelGpiG~nglan~RDf~~P~a~~e~~  257 (478)
                      |+|+|+|+||||.|+|+|||||||||||+|||++ ++++|+||||+++.||+|||+||||+|||||||||++|+|+|+++
T Consensus       158 ~~Gsg~l~TefG~L~v~pGDyvVIPRG~~frv~~-~~~~r~yiiE~~g~~~~lPe~Gpig~~~l~~pRDf~~P~a~~ed~  236 (439)
T d1eyba_         158 QKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDV-FEETRGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDR  236 (439)
T ss_dssp             EESCEEEEETTEEEEECTTEEEEECTTCCEEEEC-SSSEEEEEEEEESCCEECCCCGGGTTSCBSCGGGEEEECCCCCCC
T ss_pred             EeCcEEEEEeeeEEEecCCcEEEecCceEEEEec-CCCceEEEEeecCceeecCcccccccccccChHHhcccccccccc
Confidence            9999999999999999999999999999999999 559999999999999999999999999999999999999999986


Q ss_pred             c-cccEEEEEEECCceEEEEcCCCCCeEeeecCCccceeeccCCcccccccccccCCCCcceEEeecCCCCCceEEEeee
Q 011768          258 S-RLGYTIVQKFGGELFTARQDFSPFNVVAWHGNYVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVI  336 (478)
Q Consensus       258 ~-~~~~~vv~K~~g~l~~~~~~hsPfDVVaWhGn~~Pykydl~~F~pi~svs~dH~dPSi~tvlta~s~~pG~av~dFvi  336 (478)
                      + +++|+|++|++|+|++++|+||||||||||||||||||||+||+||||+++||+||||||||||+|++||+|||||||
T Consensus       237 ~~~~~~~v~~K~~g~l~~~~~~hsPfDVVgWhG~~~Pykynl~dF~pI~sv~~dH~pPsihtvfta~s~~~G~~v~dFvi  316 (439)
T d1eyba_         237 QVPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFVI  316 (439)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSCCEEEEEESCCCEEEEGGGCBCCCCSSSSCCCGGGGEEEEEECSSTTCEEEEEEE
T ss_pred             cCCCcEEEEEEECCEEEEEEecCCCceEEeecCcceeEEEehHhceeccccccccCCCcceeEEecCCCCCCceeEEEEE
Confidence            3 368999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCccccCCCCCCCCCCCCCcccccceeeecccccccCCcCCCeeeeecCCCCCCCChHHHHHHHhcCCCCCCcee-ccc
Q 011768          337 FPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKI-TDT  415 (478)
Q Consensus       337 F~PRw~~~e~TfRpPYyHrNv~sE~mg~i~G~y~ar~~gf~pG~~SLHp~g~pHGP~~~~~e~a~~~~~~l~P~~~-~~~  415 (478)
                      |||||+++|+||||||||||+||||||||+|+|++|++||+|||+||||+|+|||||++++|+|+++  +++|+|+ ++|
T Consensus       317 fPprw~~~~~tfrpPyyHrNv~sE~m~~i~G~y~ar~~gf~pGg~SlHp~g~pHGP~p~~~e~a~~~--~~~p~k~~~~~  394 (439)
T d1eyba_         317 FPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCFEKASKV--KLAPERIADGT  394 (439)
T ss_dssp             ECSEEECCSSSCCSCCCBCCSCEEEEEECCC--------CCTTCEEEECTTCCBCCCHHHHHHHHHS--CCCCEEESTTC
T ss_pred             eCCcccccCCcccCCcccccccceeeeEeecCcccccCCccCCeEEecCCCCCCCCChHHHHHHhcC--ccCCcccCCcc
Confidence            9999999999999999999999999999999999998999999999999999999999999999999  9999999 899


Q ss_pred             eeEEeeeccCcccchhhhc-CCCCChhhhhchhhhhcCCCCCcc
Q 011768          416 MAFMFESCLIPRICPWALE-SPFMDHDYYRCWIGLRSHFSYEEA  458 (478)
Q Consensus       416 lAfMfET~~~l~~T~~A~~-~~~~d~~Y~~~W~~l~~~f~~~~~  458 (478)
                      |||||||++||++|+||++ ++.+|++|++||++|+++|+++.+
T Consensus       395 lAfM~eT~~pl~vt~~A~~~~~~~d~~Y~~sW~~l~~~F~p~~~  438 (439)
T d1eyba_         395 MAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNSR  438 (439)
T ss_dssp             CEEEEEESSCCEECHHHHHHCC------------CCCCCCTTCC
T ss_pred             EEEEEeCCCccccCHHHhhcccccCccHHHHHhhHhccCCcccC
Confidence            9999999999999999998 556899999999999999998765
>d1y3ta1 b.82.1.5 (A:5-334) Hypothetical protein YxaG {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus japonicus [TaxId: 34381]} Back     information, alignment and structure
>d1v70a_ b.82.1.9 (A:) Hypothetical protein TTHA0104 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1yhfa1 b.82.1.9 (A:1-112) Hypothetical protein SPy1581 {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1y3ta1 b.82.1.5 (A:5-334) Hypothetical protein YxaG {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2pyta1 b.82.1.24 (A:100-227) Ethanolamine utilization protein EutQ {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2b8ma1 b.82.1.18 (A:1-108) Hypothetical protein MJ0764 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1vj2a_ b.82.1.10 (A:) Hypothetical protein TM1459 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uika1 b.82.1.2 (A:148-350) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId: 3847]} Back     information, alignment and structure
>d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus japonicus [TaxId: 34381]} Back     information, alignment and structure
>d1o4ta_ b.82.1.9 (A:) Hypothetical protein TM1287 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1o5ua_ b.82.1.8 (A:) Hypothetical protein TM1112 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1od5a2 b.82.1.2 (A:321-493) Seed storage 7S protein {Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]} Back     information, alignment and structure
>d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2et1a1 b.82.1.2 (A:1-201) Germin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1fxza2 b.82.1.2 (A:297-470) Seed storage 7S protein {Soybean (Glycine max), proglycinin [TaxId: 3847]} Back     information, alignment and structure
>d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1uija1 b.82.1.2 (A:6-175) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]} Back     information, alignment and structure
>d1lr5a_ b.82.1.2 (A:) Auxin binding protein {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d2phla2 b.82.1.2 (A:220-381) Seed storage 7S protein {French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]} Back     information, alignment and structure
>d1dgwa_ b.82.1.2 (A:) Seed storage 7S protein {Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId: 3823]} Back     information, alignment and structure
>d2f4pa1 b.82.1.9 (A:2-135) Hypothetical protein TM1010 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1rc6a_ b.82.1.11 (A:) Hypothetical protein YlbA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rc6a_ b.82.1.11 (A:) Hypothetical protein YlbA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1x82a_ b.82.1.7 (A:) Glucose-6-phosphate isomerase, GPI {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1uika2 b.82.1.2 (A:351-535) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId: 3847]} Back     information, alignment and structure
>d2bnma2 b.82.1.10 (A:77-198) Hydroxypropylphosphonic acid epoxidase Fom4, C-terminal domain {Streptomyces wedmorensis [TaxId: 43759]} Back     information, alignment and structure
>d1y9qa2 b.82.1.15 (A:83-181) Probable transcriptional regulator VC1968, C-terminal domain {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1zrra1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1sq4a_ b.82.1.11 (A:) Glyoxylate-induced protein PA1140 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2phla1 b.82.1.2 (A:11-210) Seed storage 7S protein {French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]} Back     information, alignment and structure
>d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1sfna_ b.82.1.11 (A:) Hypothetical protein DR1152 {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1sfna_ b.82.1.11 (A:) Hypothetical protein DR1152 {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d2d40a1 b.82.1.23 (A:35-342) Gentisate 1,2-dioxygenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2arca_ b.82.4.1 (A:) Regulatory protein AraC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fxza1 b.82.1.2 (A:10-248) Seed storage 7S protein {Soybean (Glycine max), proglycinin [TaxId: 3847]} Back     information, alignment and structure
>d1sq4a_ b.82.1.11 (A:) Glyoxylate-induced protein PA1140 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2d40a1 b.82.1.23 (A:35-342) Gentisate 1,2-dioxygenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2phda1 b.82.1.23 (A:17-367) Gentisate 1,2-dioxygenase {Pseudaminobacter salicylatoxidans [TaxId: 93369]} Back     information, alignment and structure
>d1od5a1 b.82.1.2 (A:7-251) Seed storage 7S protein {Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]} Back     information, alignment and structure
>d1yfua1 b.82.1.20 (A:1-174) 3-hydroxyanthranilate-3,4-dioxygenase {Ralstonia metallidurans [TaxId: 119219]} Back     information, alignment and structure
>d1zvfa1 b.82.1.20 (A:1-175) 3-hydroxyanthranilate-3,4-dioxygenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [TaxId: 89184]} Back     information, alignment and structure
>d2phda1 b.82.1.23 (A:17-367) Gentisate 1,2-dioxygenase {Pseudaminobacter salicylatoxidans [TaxId: 93369]} Back     information, alignment and structure